WorldWideScience

Sample records for biome production nbp

  1. Scaling net ecosystem production and net biome production over a heterogeneous region in the Western United States

    Science.gov (United States)

    D.P. Turner; W.D. Ritts; B.E. Law; W.B. Cohen; Z. Yan; T. Hudiburg; J.L. Campbell; M. Duane

    2007-01-01

    Bottom-up scaling of net ecosystem production (NEP) and net biome production (NBP) was used to generate a carbon budget for a large heterogeneous region (the state of Oregon, 2.5x105 km2 ) in the Western United States. Landsat resolution (30 m) remote sensing provided the basis for mapping land cover and disturbance history...

  2. Uncertainty analysis of terrestrial net primary productivity and net biome productivity in China during 1901-2005

    Science.gov (United States)

    Shao, Junjiong; Zhou, Xuhui; Luo, Yiqi; Zhang, Guodong; Yan, Wei; Li, Jiaxuan; Li, Bo; Dan, Li; Fisher, Joshua B.; Gao, Zhiqiang; He, Yong; Huntzinger, Deborah; Jain, Atul K.; Mao, Jiafu; Meng, Jihua; Michalak, Anna M.; Parazoo, Nicholas C.; Peng, Changhui; Poulter, Benjamin; Schwalm, Christopher R.; Shi, Xiaoying; Sun, Rui; Tao, Fulu; Tian, Hanqin; Wei, Yaxing; Zeng, Ning; Zhu, Qiuan; Zhu, Wenquan

    2016-05-01

    Despite the importance of net primary productivity (NPP) and net biome productivity (NBP), estimates of NPP and NBP for China are highly uncertain. To investigate the main sources of uncertainty, we synthesized model estimates of NPP and NBP for China from published literature and the Multi-scale Synthesis and Terrestrial Model Intercomparison Project (MsTMIP). The literature-based results showed that total NPP and NBP in China were 3.35 ± 1.25 and 0.14 ± 0.094 Pg C yr-1, respectively. Classification and regression tree analysis based on literature data showed that model type was the primary source of the uncertainty, explaining 36% and 64% of the variance in NPP and NBP, respectively. Spatiotemporal scales, land cover conditions, inclusion of the N cycle, and effects of N addition also contributed to the overall uncertainty. Results based on the MsTMIP data suggested that model structures were overwhelmingly important (>90%) for the overall uncertainty compared to simulations with different combinations of time-varying global change factors. The interannual pattern of NPP was similar among diverse studies and increased by 0.012 Pg C yr-1 during 1981-2000. In addition, high uncertainty in China's NPP occurred in areas with high productivity, whereas NBP showed the opposite pattern. Our results suggest that to significantly reduce uncertainty in estimated NPP and NBP, model structures should be substantially tested on the basis of empirical results. To this end, coordinated distributed experiments with multiple global change factors might be a practical approach that can validate specific structures of different models.

  3. Estimating agro-ecosystem carbon balance of northern Japan, and comparing the change in carbon stock by soil inventory and net biome productivity

    International Nuclear Information System (INIS)

    Li, Xi; Toma, Yo; Yeluripati, Jagadeesh; Iwasaki, Shinya; Bellingrath-Kimura, Sonoko D.; Jones, Edward O.; Hatano, Ryusuke

    2016-01-01

    Soil C sequestration in croplands is deemed to be one of the most promising greenhouse gas mitigation options for agriculture. We have used crop-level yields, modeled heterotrophic respiration (Rh) and land use data to estimate spatio-temporal changes in regional scale net primary productivity (NPP), plant C inputs, and net biome productivity (NBP) in northern Japan's arable croplands and grasslands for the period of 1959–2011. We compared the changes in C stocks derived from estimated NBP and using repeated inventory datasets for each individual land use type from 2005 to 2011. For the entire study region of 2193 ha, overall annual plant C inputs to the soil constituted 37% of total region NPP. Plant C inputs in upland areas (excluding bush/fallow) could be predicted by climate variables. Overall NBP for all land use types increased from − 1.26 Mg C ha −1 yr −1 in 1959–0.26 Mg C ha −1 yr −1 in 2011. However, upland and paddy fields showed a decreased in NBP over the period of 1959–2011, under the current C input scenario. From 1988, an increase in agricultural abandonment (bush/fallow) and grassland cover caused a slow increase in the regional C pools. The comparison of carbon budgets using the NBP estimation method and the soil inventory method indicated no significant difference between the two methods. Our results showed C loss in upland crops, paddy fields and sites that underwent land use change from paddy field to upland sites. We also show C gain in grassland from 2005 to 2011. An underestimation of NBP or an overestimation of repeated C inventories cannot be excluded, but either method may be suitable for tracking absolute changes in soil C, considering the uncertainty associated with these methods. - Highlights: • We compared C stocks change by two methods: (i) net biome productivity (NBP) and (ii) soil inventory. • Variation in net primary productivity (NPP), plant C input, NBP can be predicted by climate conditions. • NBP

  4. Estimating agro-ecosystem carbon balance of northern Japan, and comparing the change in carbon stock by soil inventory and net biome productivity

    Energy Technology Data Exchange (ETDEWEB)

    Li, Xi, E-mail: icy124@hotmail.com [School of Chemistry and Chemical Engineering, Southwest Petroleum University, Chengdu 610500 (China); Graduate school of Agriculture, Hokkaido University, Kita 9 Nishi 9, Kita-ku, Sapporo 060-8589 (Japan); Toma, Yo [Faculty of Agriculture, Ehime University, 3-5-7, Tarumi, Matsuyama 790-8566, Ehime (Japan); Yeluripati, Jagadeesh [The James Hutton Institute, Craigiebuckler, Aberdeen AB15 8QH, Scotland (United Kingdom); Iwasaki, Shinya [Graduate school of Agriculture, Hokkaido University, Kita 9 Nishi 9, Kita-ku, Sapporo 060-8589 (Japan); Bellingrath-Kimura, Sonoko D. [Leibniz Centre for Agricultural Landscape Research, Institute of Land Use Systems (Germany); Jones, Edward O. [Department of Infectious Disease Epidemiology, London School of Hygiene and Tropical Medicine, London (United Kingdom); Hatano, Ryusuke [Graduate school of Agriculture, Hokkaido University, Kita 9 Nishi 9, Kita-ku, Sapporo 060-8589 (Japan)

    2016-06-01

    Soil C sequestration in croplands is deemed to be one of the most promising greenhouse gas mitigation options for agriculture. We have used crop-level yields, modeled heterotrophic respiration (Rh) and land use data to estimate spatio-temporal changes in regional scale net primary productivity (NPP), plant C inputs, and net biome productivity (NBP) in northern Japan's arable croplands and grasslands for the period of 1959–2011. We compared the changes in C stocks derived from estimated NBP and using repeated inventory datasets for each individual land use type from 2005 to 2011. For the entire study region of 2193 ha, overall annual plant C inputs to the soil constituted 37% of total region NPP. Plant C inputs in upland areas (excluding bush/fallow) could be predicted by climate variables. Overall NBP for all land use types increased from − 1.26 Mg C ha{sup −1} yr{sup −1} in 1959–0.26 Mg C ha{sup −1} yr{sup −1} in 2011. However, upland and paddy fields showed a decreased in NBP over the period of 1959–2011, under the current C input scenario. From 1988, an increase in agricultural abandonment (bush/fallow) and grassland cover caused a slow increase in the regional C pools. The comparison of carbon budgets using the NBP estimation method and the soil inventory method indicated no significant difference between the two methods. Our results showed C loss in upland crops, paddy fields and sites that underwent land use change from paddy field to upland sites. We also show C gain in grassland from 2005 to 2011. An underestimation of NBP or an overestimation of repeated C inventories cannot be excluded, but either method may be suitable for tracking absolute changes in soil C, considering the uncertainty associated with these methods. - Highlights: • We compared C stocks change by two methods: (i) net biome productivity (NBP) and (ii) soil inventory. • Variation in net primary productivity (NPP), plant C input, NBP can be predicted by climate

  5. Biomes.

    Science.gov (United States)

    Web Feet K-8, 2001

    2001-01-01

    This annotated subject guide to Web sites and additional resources focuses on biomes. Specifies age levels for resources that include Web sites, CD-ROMs and software, videos, books, audios, and magazines; includes professional resources; and presents a relevant class activity. (LRW)

  6. Estimating Trends and Variation of Net Biome Productivity in India for 1980-2012 Using a Land Surface Model

    Science.gov (United States)

    Gahlot, Shilpa; Shu, Shijie; Jain, Atul K.; Baidya Roy, Somnath

    2017-11-01

    In this paper we explore the trend in net biome productivity (NBP) over India for the period 1980-2012 and quantify the impact of different environmental factors, including atmospheric CO2 concentrations ([CO2]), land use and land cover change, climate, and nitrogen deposition on carbon fluxes using a land surface model, Integrated Science Assessment Model. Results show that terrestrial ecosystems of India have been a carbon sink for this period. Driven by a strong CO2 fertilization effect, magnitude of NBP increased from 27.17 TgC/yr in the 1980s to 34.39 TgC/yr in the 1990s but decreased to 23.70 TgC/yr in the 2000s due to change in climate. Adoption of forest conservation, management, and reforestation policies in the past decade has promoted carbon sequestration in the ecosystems, but this effect has been offset by loss of carbon from ecosystems due to rising temperatures and decrease in precipitation.

  7. Changes in forest productivity across Alaska consistent with biome shift

    Science.gov (United States)

    Peter S.A. Beck; Glenn P. Juday; Claire Alix; Valerie A. Barber; Stephen E. Winslow; Emily E. Sousa; Patricia Heiser; James D. Herriges; Scott J. Goetz

    2011-01-01

    Global vegetation models predict that boreal forests are particularly sensitive to a biome shift during the 21st century. This shift would manifest itself first at the biome's margins, with evergreen forest expanding into current tundra while being replaced by grasslands or temperate forest at the biome's southern edge. We evaluated changes in forest...

  8. Extreme precipitation patterns and reductions of terrestrial ecosystem production across biomes

    Science.gov (United States)

    Yongguang Zhang; M. Susan Moran; Mark A. Nearing; Guillermo E. Ponce Campos; Alfredo R. Huete; Anthony R. Buda; David D. Bosch; Stacey A. Gunter; Stanley G. Kitchen; W. Henry McNab; Jack A. Morgan; Mitchel P. McClaran; Diane S. Montoya; Debra P.C. Peters; Patrick J. Starks

    2013-01-01

    Precipitation regimes are predicted to shift to more extreme patterns that are characterized by more heavy rainfall events and longer dry intervals, yet their ecological impacts on vegetation production remain uncertain across biomes in natural climatic conditions. This in situ study investigated the effects of these climatic conditions on aboveground net primary...

  9. Temporal Changes in Coupled Vegetation Phenology and Productivity are Biome-Specific in the Northern Hemisphere

    Directory of Open Access Journals (Sweden)

    Lanhui Wang

    2017-12-01

    Full Text Available Global warming has greatly stimulated vegetation growth through both extending the growing season and promoting photosynthesis in the Northern Hemisphere (NH. Analyzing the combined dynamics of such trends can potentially improve our current understanding on changes in vegetation functioning and the complex relationship between anthropogenic and climatic drivers. This study aims to analyze the relationships (long-term trends and correlations of length of vegetation growing season (LOS and vegetation productivity assessed by the growing season NDVI integral (GSI in the NH (>30°N to study any dependency of major biomes that are characterized by different imprint from anthropogenic influence. Spatial patterns of converging/diverging trends in LOS and GSI and temporal changes in the coupling between LOS and GSI are analyzed for major biomes at hemispheric and continental scales from the third generation Global Inventory Monitoring and Modeling Studies (GIMMS Normalized Difference Vegetation Index (NDVI dataset for a 32-year period (1982–2013. A quarter area of the NH is covered by converging trends (consistent significant trends in LOS and GSI, whereas diverging trends (opposing significant trends in LOS and GSI cover about 6% of the region. Diverging trends are observed mainly in high latitudes and arid/semi-arid areas of non-forest biomes (shrublands, savannas, and grasslands, whereas forest biomes and croplands are primarily characterized by converging trends. The study shows spatially-distinct and biome-specific patterns between the continental land masses of Eurasia (EA and North America (NA. Finally, areas of high positive correlation between LOS and GSI showed to increase during the period of analysis, with areas of significant positive trends in correlation being more widespread in NA as compared to EA. The temporal changes in the coupled vegetation phenology and productivity suggest complex relationships and interactions that are induced

  10. Evaluation of MODIS NPP and GPP products across multiple biomes.

    Science.gov (United States)

    David P. Turner; William D. Ritts; Warren B. Cohen; Stith T. Gower; Steve W. Running; Maosheng Zhao; Marcos H. Costa; Al A. Kirschbaum; Jay M. Ham; Scott R. Saleska; Douglas E. Ahl

    2006-01-01

    Estimates of daily gross primary production (GPP) and annual net primary production (NPP) at the 1 km spatial resolution are now produced operationally for the global terrestrial surface using imagery from the MODIS (Moderate Resolution Imaging Spectroradiometer) sensor. Ecosystem-level measurements of GPP at eddy covariance flux towers and plot-level measurements of...

  11. Effects of feminine hygiene products on the vaginal mucosal biome

    Directory of Open Access Journals (Sweden)

    Raina N. Fichorova

    2013-02-01

    Full Text Available Background: Over-the-counter (OTC feminine hygiene products come with little warning about possible side effects. This study evaluates in-vitro their effects on Lactobacillus crispatus, which is dominant in the normal vaginal microbiota and helps maintain a healthy mucosal barrier essential for normal reproductive function and prevention of sexually transmitted infections and gynecologic cancer. Methods: A feminine moisturizer (Vagisil, personal lubricant, and douche were purchased OTC. A topical spermicide (nonoxynol-9 known to alter the vaginal immune barrier was used as a control. L. crispatus was incubated with each product for 2 and 24h and then seeded on agar for colony forming units (CFU. Human vaginal epithelial cells were exposed to products in the presence or absence of L. crispatus for 24h, followed by epithelium-associated CFU enumeration. Interleukin-8 was immunoassayed and ANOVA was used for statistical evaluation. Results: Nonoxynol-9 and Vagisil suppressed Lactobacillus growth at 2h and killed all bacteria at 24h. The lubricant decreased bacterial growth insignificantly at 2h but killed all at 24h. The douche did not have a significant effect. At full strength, all products suppressed epithelial viability and all, except the douche, suppressed epithelial-associated CFU. When applied at non-toxic dose in the absence of bacteria, the douche and moisturizer induced an increase of IL-8, suggesting a potential to initiate inflammatory reaction. In the presence of L. crispatus, the proinflammatory effects of the douche and moisturizer were countered, and IL-8 production was inhibited in the presence of the other products. Conclusion: Some OTC vaginal products may be harmful to L. crispatus and alter the vaginal immune environment. Illustrated through these results, L. crispatus is essential in the preservation of the function of vaginal epithelial cells in the presence of some feminine hygiene products. More research should be invested

  12. Evaluation of MODIS Gross Primary Production across Multiple Biomes in China Using Eddy Covariance Flux Data

    Directory of Open Access Journals (Sweden)

    Hongji Zhu

    2016-05-01

    Full Text Available MOD17A2 provides near real-time estimates of gross primary production (GPP globally. In this study, MOD17A2 GPP was evaluated using eddy covariance (EC flux measurements at eight sites in five various biome types across China. The sensitivity of MOD17A2 to meteorological data and leaf area index/fractional photosynthetically active radiation (LAI/FPAR products were examined by introducing site meteorological measurements and improved Global Land Surface Satellite (GLASS LAI products. We also assessed the potential error contributions from land cover and maximum light use efficiency (εmax. The results showed that MOD17A2 agreed well with flux measurements of annual GPP (R2 = 0.76 when all biome types were considered as a whole. However, MOD17A2 was ineffective for estimating annual GPP at mixed forests, evergreen needleleaf forests and croplands, respectively. Moreover, MOD17A2 underestimated flux derived GPP during the summer (R2 = 0.46. It was found that the meteorological data used in MOD17A2 failed to properly estimate the site measured vapor pressure deficits (VPD (R2 = 0.31. Replacing the existing LAI/FPAR data with GLASS LAI products reduced MOD17A2 GPP uncertainties. Though land cover presented the fewest errors, εmax prescribed in MOD17A2 were much lower than inferred εmax calculated from flux data. Thus, the qualities of meteorological data and LAI/FPAR products need to be improved, and εmax should be adjusted to provide better GPP estimates using MOD17A2 for Chinese ecosystems.

  13. Vegetation productivity responds to sub-annual climate conditions across semiarid biomes

    Science.gov (United States)

    In the Southwestern United States (SW), the current prolonged warm drought is similar to the predicted future climate change scenarios for the region. This study aimed to determine patterns in vegetation response to the early 21st century drought across multiple biomes. We hypothesized that differen...

  14. NPP Multi-Biome: Global Primary Production Data Initiative Products, R2

    Data.gov (United States)

    National Aeronautics and Space Administration — Net primary productivity (NPP) estimates were compiled by the Global Primary Production Data Initiative (GPPDI). The database covers 2,523 individual sites and 5,164...

  15. [Parameter sensitivity of simulating net primary productivity of Larix olgensis forest based on BIOME-BGC model].

    Science.gov (United States)

    He, Li-hong; Wang, Hai-yan; Lei, Xiang-dong

    2016-02-01

    Model based on vegetation ecophysiological process contains many parameters, and reasonable parameter values will greatly improve simulation ability. Sensitivity analysis, as an important method to screen out the sensitive parameters, can comprehensively analyze how model parameters affect the simulation results. In this paper, we conducted parameter sensitivity analysis of BIOME-BGC model with a case study of simulating net primary productivity (NPP) of Larix olgensis forest in Wangqing, Jilin Province. First, with the contrastive analysis between field measurement data and the simulation results, we tested the BIOME-BGC model' s capability of simulating the NPP of L. olgensis forest. Then, Morris and EFAST sensitivity methods were used to screen the sensitive parameters that had strong influence on NPP. On this basis, we also quantitatively estimated the sensitivity of the screened parameters, and calculated the global, the first-order and the second-order sensitivity indices. The results showed that the BIOME-BGC model could well simulate the NPP of L. olgensis forest in the sample plot. The Morris sensitivity method provided a reliable parameter sensitivity analysis result under the condition of a relatively small sample size. The EFAST sensitivity method could quantitatively measure the impact of simulation result of a single parameter as well as the interaction between the parameters in BIOME-BGC model. The influential sensitive parameters for L. olgensis forest NPP were new stem carbon to new leaf carbon allocation and leaf carbon to nitrogen ratio, the effect of their interaction was significantly greater than the other parameter' teraction effect.

  16. The world's biomes and primary production as a triple tragedy of the commons foraging game played among plants.

    Science.gov (United States)

    McNickle, Gordon G; Gonzalez-Meler, Miquel A; Lynch, Douglas J; Baltzer, Jennifer L; Brown, Joel S

    2016-11-16

    Plants appear to produce an excess of leaves, stems and roots beyond what would provide the most efficient harvest of available resources. One way to understand this overproduction of tissues is that excess tissue production provides a competitive advantage. Game theoretic models predict overproduction of all tissues compared with non-game theoretic models because they explicitly account for this indirect competitive benefit. Here, we present a simple game theoretic model of plants simultaneously competing to harvest carbon and nitrogen. In the model, a plant's fitness is influenced by its own leaf, stem and root production, and the tissue production of others, which produces a triple tragedy of the commons. Our model predicts (i) absolute net primary production when compared with two independent global datasets; (ii) the allocation relationships to leaf, stem and root tissues in one dataset; (iii) the global distribution of biome types and the plant functional types found within each biome; and (iv) ecosystem responses to nitrogen or carbon fertilization. Our game theoretic approach removes the need to define allocation or vegetation type a priori but instead lets these emerge from the model as evolutionarily stable strategies. We believe this to be the simplest possible model that can describe plant production. © 2016 The Author(s).

  17. Metabolism of 4-nitrobiphenyl (NBP) by cultured rat urothelial cells

    International Nuclear Information System (INIS)

    Swaminathan, S.; Lang, D.B.; Reznikoff, C.A.

    1986-01-01

    The potential of rat urothelial cells to metabolize NBP was evaluated by incubating 4.3 x 10 7 viable cells with 20 μM [ 3 H]NBP in a serum free medium for 48 hours. The culture medium was examined for metabolites of NBP by extraction with ethyl acetate and subsequent chromatographic analysis. High pressure liquid chromatography of the solvent extract using a Whatman ODS-3, C-18 column in 70% methanol-water at a flow rate of 1 ml/min revealed two major peaks at retention times of approximately 8 and 13 min. Thin layer chromatography showed two regions of radioactivity at Rf values of 0.35 and 0.83, the latter corresponding with NBP. Based on the chromatographic data the metabolite with the retention time of 8.0 min in HPLC and an Rf of 0.35 in TLC has been tentatively identified as 4-acetylaminobiphenyl. Analysis of binding to proteins and nucleic acids following exposure to [ 3 H]NBP revealed a significant amount (0.03% of initially applied radioactivity) in the protein fractions. Control samples of NBP incubated in medium, without the urothelial cells revealed only the parent compound. These data suggest that rat bladder cells possess the metabolic capability to reduce NBP and to generate reactive metabolites that bind to cellular macromolecules

  18. Testing the applicability of BIOME-BGC to simulate beech gross primary production in Europe using a new continental weather dataset

    DEFF Research Database (Denmark)

    Chiesi, Marta; Chirici, Gherardo; Marchetti, Marco

    2016-01-01

    A daily 1-km Pan-European weather dataset can drive the BIOME-BGC model for the estimation of current and future beech gross primary production (GPP). Annual beech GPP is affected primarily by spring temperature and more irregularly by summer water stress.The spread of beech forests in Europe...... forest ecosystems having different climatic conditions where the eddy covariance technique is used to measure water and carbon fluxes. The experiment is in three main steps. First, the accuracy of BIOME-BGC GPP simulations is assessed through comparison with flux observations. Second, the influence...

  19. Bacterial biomes and potential human pathogens in irrigation water and leafy greens from different production systems described using pyrosequencing.

    Science.gov (United States)

    Jongman, M; Chidamba, L; Korsten, L

    2017-10-01

    To investigate the influence of irrigation water microbial quality on leafy green vegetables produced in commercial and small-scale farms as well as homestead gardens using pyrosequencing. Next generation sequencing analysis of the V1-V3 hypervariable region of bacterial 16S rDNA was used to compare bacterial diversity in irrigation water sources and on leafy vegetables. In all samples (12) analysed, the phylum Proteobacteria (64·5%), class Gammaproteobacteria (56·6%) and genus Aeromonas (14·4%) were found to be dominant. Of the total Escherichia sequences detected in tested samples, lettuce (16·3%) from the one commercial farm harboured more sequences than cabbage from the small-scale farm (1·3%) or homestead gardens (1·9%). Escherichia sequences were detected in both irrigation water (4·6%) and on cabbage (1·3%) samples from the small-scale farm. The genus Salmonella was absent in borehole water but was detected in the holding dam water (biomes in irrigation water and on leafy greens were described with pyrosequencing and revealed insights into prevalence of potential and opportunistic pathogens across different production systems. © 2017 The Society for Applied Microbiology.

  20. Interpreting forest and grassland biome productivity utilizing nested scales of image resolution and biogeographical analysis

    Science.gov (United States)

    Iverson, Louis R.; Cook, Elizabeth A.; Graham, Robin L.; Olson, Jerry S.; Frank, Thomas; Ke, Ying; Treworgy, Colin; Risser, Paul G.

    1987-01-01

    This report summarizes progress made in our investigation of forest productivity assessment using TM and other biogeographical data during the third six-month period of the grant. Data acquisition and methodology hurdles are largely complete. Four study areas for which the appropriate TM and ancillary data were available are currently being intensively analyzed. Significant relationships have been found on a site by site basis to suggest that forest productivity can be qualitatively assessed using TM band values and site characteristics. Perhaps the most promising results relate TM unsupervised classes to forest productivity, with enhancement from elevation data. During the final phases of the research, multi-temporal and regional comparisons of results will be addressed, as well as the predictability of forest productivity patterns over a large region using TM data and/or TM nested within AVHRR data.

  1. Interpreting forest biome productivity and cover utilizing nested scales of image resolution and biogeographical analysis

    Science.gov (United States)

    Iverson, Louis R.; Cook, Elizabeth A.; Graham, Robin L.; Olson, Jerry S.; Frank, Thomas D.; Ying, KE

    1988-01-01

    The objective was to relate spectral imagery of varying resolution with ground-based data on forest productivity and cover, and to create models to predict regional estimates of forest productivity and cover with a quantifiable degree of accuracy. A three stage approach was outlined. In the first stage, a model was developed relating forest cover or productivity to TM surface reflectance values (TM/FOREST models). The TM/FOREST models were more accurate when biogeographic information regarding the landscape was either used to stratigy the landscape into more homogeneous units or incorporated directly into the TM/FOREST model. In the second stage, AVHRR/FOREST models that predicted forest cover and productivity on the basis of AVHRR band values were developed. The AVHRR/FOREST models had statistical properties similar to or better than those of the TM/FOREST models. In the third stage, the regional predictions were compared with the independent U.S. Forest Service (USFS) data. To do this regional forest cover and forest productivity maps were created using AVHRR scenes and the AVHRR/FOREST models. From the maps the county values of forest productivity and cover were calculated. It is apparent that the landscape has a strong influence on the success of the approach. An approach of using nested scales of imagery in conjunction with ground-based data can be successful in generating regional estimates of variables that are functionally related to some variable a sensor can detect.

  2. Evaluation of the Latest MODIS GPP Products across Multiple Biomes Using Global Eddy Covariance Flux Data

    Directory of Open Access Journals (Sweden)

    Lunche Wang

    2017-04-01

    Full Text Available The latest MODIS GPP (gross primary productivity product, MOD17A2H, has great advantages over the previous version, MOD17A2, because the resolution increased from 1000 m to 500 m. In this study, MOD17A2H GPP was assessed using the latest eddy covariance (EC flux data (FLUXNET2015 Dataset at eighteen sites in six ecosystems across the globe. The sensitivity of MOD17A2H GPP to the meteorology dataset and the fractional photosynthetically- active radiation (FPAR product was explored by introducing site meteorology observations and improved Global Land Surface Satellite (GLASS Leaf Area Index (LAI products. The results showed that MOD17A2H GPP underestimated flux-derived GPP at most sites. Its performance in estimating annual GPP was poor (R2 = 0.62 and even worse over eight days (R2 = 0.52. For the MOD17A2H algorithm, replacing the reanalysis meteorological datasets with the site meteorological measurements failed to improve the estimation accuracies. However, great improvements in estimating the site-based GPP were gained by replacing MODIS FPAR with GLASS FPAR. This indicated that in the existing MOD17A2H product, the errors were originated more from FPAR than the meteorological data. We further examined the potential error contributions from land cover classification and maximum light use efficiency (εmax. It was found that the current land cover classification scheme exhibited frequent misclassification errors. Moreover, the εmax value assigned in MOD17A2H was much smaller than the inferred εmax value. Therefore, the qualities of FPAR and land cover classification datasets should be upgraded, and the εmax value needs to be adjusted to provide more accurate GPP estimates using MOD17A2H for global ecosystems.

  3. Strategies to increase cellulase production with submerged fermentation using fungi isolated from the Brazilian biome

    Directory of Open Access Journals (Sweden)

    Genilton da Silva Faheina Junior

    2015-03-01

    Full Text Available Studies on new microbial sources of cellulase and accurate assessment of the steps that increase cellulase production are essential strategies to reduce costs of various processes using such enzymes. This study aimed at the selection of cellulase-producing filamentous fungi, and at the research of parameters involving cellulase production by submerged fermentation. The first test consisted of selecting the best cellulase-producing microorganisms (FPase in Erlenmeyer flasks containing 200 mL of specific growth medium. The next test was designed to further investigate the enzyme production in fermentation with four types of soluble sugars: glucose, lactose, sucrose and xylose. In bioreactor tests, three different inoculation strategies were analyzed. The best FPase activity was presented by the strain Trichoderma sp. CMIAT 041 (49.9 FPU L-1 and CMCase by the fungus Lasiodiplodia theobromae CMIAT 096 (350.0 U L-1. Sucrose proved to be the best option among the soluble sugars tested, with higher rates of FPase activity (49.9 FPU L-1 and CMCase (119.7 U L-1. The best inoculation strategy for the bioreactor was a spore suspension obtained from a semi-solid state fermentation of wheat bran for 72h.

  4. Defining functional biomes and monitoring their change globally.

    Science.gov (United States)

    Higgins, Steven I; Buitenwerf, Robert; Moncrieff, Glenn R

    2016-11-01

    Biomes are important constructs for organizing understanding of how the worlds' major terrestrial ecosystems differ from one another and for monitoring change in these ecosystems. Yet existing biome classification schemes have been criticized for being overly subjective and for explicitly or implicitly invoking climate. We propose a new biome map and classification scheme that uses information on (i) an index of vegetation productivity, (ii) whether the minimum of vegetation activity is in the driest or coldest part of the year, and (iii) vegetation height. Although biomes produced on the basis of this classification show a strong spatial coherence, they show little congruence with existing biome classification schemes. Our biome map provides an alternative classification scheme for comparing the biogeochemical rates of terrestrial ecosystems. We use this new biome classification scheme to analyse the patterns of biome change observed over recent decades. Overall, 13% to 14% of analysed pixels shifted in biome state over the 30-year study period. A wide range of biome transitions were observed. For example, biomes with tall vegetation and minimum vegetation activity in the cold season shifted to higher productivity biome states. Biomes with short vegetation and low seasonality shifted to seasonally moisture-limited biome states. Our findings and method provide a new source of data for rigorously monitoring global vegetation change, analysing drivers of vegetation change and for benchmarking models of terrestrial ecosystem function. © 2016 John Wiley & Sons Ltd.

  5. Deriving a light use efficiency model from eddy covariance flux data for predicting daily gross primary production across biomes

    Science.gov (United States)

    Yuan, W.; Liu, S.; Zhou, G.; Tieszen, L.L.; Baldocchi, D.; Bernhofer, C.; Gholz, H.; Goldstein, Allen H.; Goulden, M.L.; Hollinger, D.Y.; Hu, Y.; Law, B.E.; Stoy, Paul C.; Vesala, T.; Wofsy, S.C.

    2007-01-01

    The quantitative simulation of gross primary production (GPP) at various spatial and temporal scales has been a major challenge in quantifying the global carbon cycle. We developed a light use efficiency (LUE) daily GPP model from eddy covariance (EC) measurements. The model, called EC-LUE, is driven by only four variables: normalized difference vegetation index (NDVI), photosynthetically active radiation (PAR), air temperature, and the Bowen ratio of sensible to latent heat flux (used to calculate moisture stress). The EC-LUE model relies on two assumptions: First, that the fraction of absorbed PAR (fPAR) is a linear function of NDVI; Second, that the realized light use efficiency, calculated from a biome-independent invariant potential LUE, is controlled by air temperature or soil moisture, whichever is most limiting. The EC-LUE model was calibrated and validated using 24,349 daily GPP estimates derived from 28 eddy covariance flux towers from the AmeriFlux and EuroFlux networks, covering a variety of forests, grasslands and savannas. The model explained 85% and 77% of the observed variations of daily GPP for all the calibration and validation sites, respectively. A comparison with GPP calculated from the Moderate Resolution Imaging Spectroradiometer (MODIS) indicated that the EC-LUE model predicted GPP that better matched tower data across these sites. The realized LUE was predominantly controlled by moisture conditions throughout the growing season, and controlled by temperature only at the beginning and end of the growing season. The EC-LUE model is an alternative approach that makes it possible to map daily GPP over large areas because (1) the potential LUE is invariant across various land cover types and (2) all driving forces of the model can be derived from remote sensing data or existing climate observation networks.

  6. Copula Multivariate analysis of Gross primary production and its hydro-environmental driver; A BIOME-BGC model applied to the Antisana páramos

    Science.gov (United States)

    Minaya, Veronica; Corzo, Gerald; van der Kwast, Johannes; Galarraga, Remigio; Mynett, Arthur

    2014-05-01

    Simulations of carbon cycling are prone to uncertainties from different sources, which in general are related to input data, parameters and the model representation capacities itself. The gross carbon uptake in the cycle is represented by the gross primary production (GPP), which deals with the spatio-temporal variability of the precipitation and the soil moisture dynamics. This variability associated with uncertainty of the parameters can be modelled by multivariate probabilistic distributions. Our study presents a novel methodology that uses multivariate Copulas analysis to assess the GPP. Multi-species and elevations variables are included in a first scenario of the analysis. Hydro-meteorological conditions that might generate a change in the next 50 or more years are included in a second scenario of this analysis. The biogeochemical model BIOME-BGC was applied in the Ecuadorian Andean region in elevations greater than 4000 masl with the presence of typical vegetation of páramo. The change of GPP over time is crucial for climate scenarios of the carbon cycling in this type of ecosystem. The results help to improve our understanding of the ecosystem function and clarify the dynamics and the relationship with the change of climate variables. Keywords: multivariate analysis, Copula, BIOME-BGC, NPP, páramos

  7. A spatial implementation of the BIOME-BGC to model grassland GPP production and water budgets in the Ecuadorian Andean Region

    Science.gov (United States)

    Minaya, Veronica; Corzo, Gerald; van der Kwast, Johannes; Mynett, Arthur

    2016-04-01

    Many terrestrial biogeochemistry process models have been applied around the world at different scales and for a large range of ecosystems. Grasslands, and in particular the ones located in the Andean Region are essential ecosystems that sustain important ecological processes; however, just a few efforts have been made to estimate the gross primary production (GPP) and the hydrological budgets for this specific ecosystem along an altitudinal gradient. A previous study, which is one of the few available in the region, considered the heterogeneity of the main properties of the páramo vegetation and showed significant differences in plant functional types, site/soil parameters and daily meteorology. This study extends the work above mentioned and uses spatio-temporal analysis of the BIOME-BGC model results. This was done to simulate the GPP and the water fluxes in space and time, by applying altitudinal analysis. The catchment located at the southwestern slope of the Antisana volcano in Ecuador was selected as a representative area of the Andean páramos and its hydrological importance as one of the main sources of a water supply reservoir in the region. An accurate estimation of temporal changes in GPP in the region is important for carbon budget assessments, evaluation of the impact of climate change and biomass productivity. This complex and yet interesting problem was integrated by the ecosystem process model BIOME-BGC, the results were evaluated and associated to the land cover map where the growth forms of vegetation were identified. The responses of GPP and the water fluxes were not only dependent on the environmental drivers but also on the ecophysiology and the site specific parameters. The model estimated that the GPP at lower elevations doubles the amount estimated at higher elevations, which might have a large implication during extrapolations at larger spatio-temporal scales. The outcomes of the stand hydrological processes demonstrated a wrong

  8. A changing number of alternative states in the boreal biome: Reproducibility risks of replacing remote sensing products.

    NARCIS (Netherlands)

    Xu, Chi; Holmgren, M.; Nes, van E.H.; Hirota, M.; Stuart Chapin, F.; Scheffer, M.

    2015-01-01

    Publicly available remote sensing products have boosted science in many ways. The openness of these data sources suggests high reproducibility. However, as we show here, results may be specific to versions of the data products that can become unavailable as new versions are posted. We focus on

  9. The Yeast Nbp35-Cfd1 Cytosolic Iron-Sulfur Cluster Scaffold Is an ATPase.

    Science.gov (United States)

    Camire, Eric J; Grossman, John D; Thole, Grace J; Fleischman, Nicholas M; Perlstein, Deborah L

    2015-09-25

    Nbp35 and Cfd1 are prototypical members of the MRP/Nbp35 class of iron-sulfur (FeS) cluster scaffolds that function to assemble nascent FeS clusters for transfer to FeS-requiring enzymes. Both proteins contain a conserved NTPase domain that genetic studies have demonstrated is essential for their cluster assembly activity inside the cell. It was recently reported that these proteins possess no or very low nucleotide hydrolysis activity in vitro, and thus the role of the NTPase domain in cluster biogenesis has remained uncertain. We have reexamined the NTPase activity of Nbp35, Cfd1, and their complex. Using in vitro assays and site-directed mutagenesis, we demonstrate that the Nbp35 homodimer and the Nbp35-Cfd1 heterodimer are ATPases, whereas the Cfd1 homodimer exhibited no or very low ATPase activity. We ruled out the possibility that the observed ATP hydrolysis activity might result from a contaminating ATPase by showing that mutation of key active site residues reduced activity to background levels. Finally, we demonstrate that the fluorescent ATP analog 2'/3'-O-(N'-methylanthraniloyl)-ATP (mantATP) binds stoichiometrically to Nbp35 with a KD = 15.6 μM and that an Nbp35 mutant deficient in ATP hydrolysis activity also displays an increased KD for mantATP. Together, our results demonstrate that the cytosolic iron-sulfur cluster assembly scaffold is an ATPase and pave the way for interrogating the role of nucleotide hydrolysis in cluster biogenesis by this large family of cluster scaffolding proteins found across all domains of life. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

  10. Consequences of biome depletion

    International Nuclear Information System (INIS)

    Salvucci, Emiliano

    2013-01-01

    The human microbiome is an integral part of the superorganism together with their host and they have co-evolved since the early days of the existence of the human species. The modification of the microbiome as a result changes in food and social habits of human beings throughout their life history has led to the emergence of many diseases. In contrast with the Darwinian view of nature of selfishness and competence, new holistic approaches are rising. Under these views, the reconstitution of the microbiome comes out as a fundamental therapy for emerging diseases related to biome depletion.

  11. Mid-wavelength infrared unipolar nBp superlattice photodetector

    Science.gov (United States)

    Kazemi, Alireza; Myers, Stephen; Taghipour, Zahra; Mathews, Sen; Schuler-Sandy, Ted; Lee, Seunghyun; Cowan, Vincent M.; Garduno, Eli; Steenbergen, Elizabeth; Morath, Christian; Ariyawansa, Gamini; Scheihing, John; Krishna, Sanjay

    2018-01-01

    We report a Mid-Wavelength Infrared (MWIR) barrier photodetector based on the InAs/GaSb/AlSb type-II superlattice (T2SL) material system. The nBp design consists of a single unipolar barrier (InAs/AlSb SL) placed between a 4 μm thick p-doped absorber (InAs/GaSb SL) and an n-type contact layer (InAs/GaSb SL). At 80 K, the device exhibited a 50% cut-off wavelength of 5 μm, was fully turned-ON at zero bias and the measured QE was 50% (front side illumination with no AR coating) at 4.5 μm with a dark current density of 4.7 × 10-6 A/cm2 at Vb = 50 mV. At 150 K and Vb = 50 mV, the 50% cut-off wavelength increased to 5.3 μm, and the QE was 54% at 4.5 μm with a dark current of 5.0 × 10-4 A/cm2.

  12. The influence of production conditions, starting material and deposition environment on charcoal alteration in a tropical biome.

    Science.gov (United States)

    Ascough, Philippa; Bird, Michael; Meredith, Will; Large, David; Snape, Colin; Manion, Corinne

    2014-05-01

    Natural and anthropogenic burning events are a key link in the global carbon cycle, substantially influencing atmospheric CO2 levels, and consuming c.8700 teragrams yr-1 of dry biomass [1,2,3]. An important result of this process is charcoal, when lignocellulosic structures in biomass (e.g. wood) are converted to aromatic domains with high chemical stability. Charcoal is therefore not readily re-oxidized to CO2, with estimates of 5-7 ky for the half-life of charcoal carbon in soils [3,4]. Charcoal's high carbon content coupled with high environmental resistance has led to the concept of biochar as a valuable means of global carbon sequestration, capable of carbon offsets comparable to annual anthropogenic fuel emissions [5,6,7]. Charcoal is not, however, an environmentally inert substance, and at least some components of charcoal are susceptible to alteration in depositional environments. Despite the importance of charcoal in global carbon cycling, the mechanisms by which charcoal is altered in the environment remain, as yet, poorly understood. This fact limits our ability to properly incorporate both natural environmental charcoal and biochar into global carbon budgets. This study aimed to improve understanding of charcoal alteration in the environment by examining the influence of production conditions, starting material and deposition environment on the physical and chemical characteristics of charcoal at a field site in the Daintree rainforest. These factors have been identified as critical in determining the dynamics of charcoal in depositional environments [8,9] and climatic conditions at the field site (in Tropical Queensland, Australia) are likely to result in extensive alteration of charcoal. Charcoal from wood (Nothofagus spp.), algae (Enteromorpha spp.), and sugarcane (Saccharum spp.) biomass was produced at temperatures over 300-500°C and exposed to conditions of varying pH and vegetation cover. The effect of these variables on charcoal chemistry

  13. Disturbance maintains alternative biome states.

    Science.gov (United States)

    Dantas, Vinícius de L; Hirota, Marina; Oliveira, Rafael S; Pausas, Juli G

    2016-01-01

    Understanding the mechanisms controlling the distribution of biomes remains a challenge. Although tropical biome distribution has traditionally been explained by climate and soil, contrasting vegetation types often occur as mosaics with sharp boundaries under very similar environmental conditions. While evidence suggests that these biomes are alternative states, empirical broad-scale support to this hypothesis is still lacking. Using community-level field data and a novel resource-niche overlap approach, we show that, for a wide range of environmental conditions, fire feedbacks maintain savannas and forests as alternative biome states in both the Neotropics and the Afrotropics. In addition, wooded grasslands and savannas occurred as alternative grassy states in the Afrotropics, depending on the relative importance of fire and herbivory feedbacks. These results are consistent with landscape scale evidence and suggest that disturbance is a general factor driving and maintaining alternative biome states and vegetation mosaics in the tropics. © 2015 John Wiley & Sons Ltd/CNRS.

  14. Evolution of the indoor biome.

    Science.gov (United States)

    Martin, Laura J; Adams, Rachel I; Bateman, Ashley; Bik, Holly M; Hawks, John; Hird, Sarah M; Hughes, David; Kembel, Steven W; Kinney, Kerry; Kolokotronis, Sergios-Orestis; Levy, Gabriel; McClain, Craig; Meadow, James F; Medina, Raul F; Mhuireach, Gwynne; Moreau, Corrie S; Munshi-South, Jason; Nichols, Lauren M; Palmer, Clare; Popova, Laura; Schal, Coby; Täubel, Martin; Trautwein, Michelle; Ugalde, Juan A; Dunn, Robert R

    2015-04-01

    Few biologists have studied the evolutionary processes at work in indoor environments. Yet indoor environments comprise approximately 0.5% of ice-free land area--an area as large as the subtropical coniferous forest biome. Here we review the emerging subfield of 'indoor biome' studies. After defining the indoor biome and tracing its deep history, we discuss some of its evolutionary dimensions. We restrict our examples to the species found in human houses--a subset of the environments constituting the indoor biome--and offer preliminary hypotheses to advance the study of indoor evolution. Studies of the indoor biome are situated at the intersection of evolutionary ecology, anthropology, architecture, and human ecology and are well suited for citizen science projects, public outreach, and large-scale international collaborations. Copyright © 2015 Elsevier Ltd. All rights reserved.

  15. Climatic and management drivers of CO2 exchanges by a production crop: analysis over three successive 4-year cycles.

    Science.gov (United States)

    Buysse, Pauline; Moureaux, Christine; Bodson, Bernard; Aubinet, Marc

    2016-04-01

    Carbon dioxide (CO2) exchanges between crops and the atmosphere are influenced by both climatic and crop management drivers. The investigated crop, situated at the Lonzée Terrestrial Observatory (candidate ICOS site) in the Hesbaye region in Belgium and managed for more than 70 years using conventional farming practices, was monitored over three complete sugar beet/winter wheat/potato/winter wheat rotation cycles from 2004 to 2016. Eddy covariance, automatic and manual soil chambers, leaf diffusion and biomass measurements were performed continuously in order to obtain the daily and seasonal Net Ecosystem Exchange (NEE), Gross Primary Productivity (GPP), total Ecosystem Respiration (TER), Net Primary Productivity (NPP), autotrophic respiration, heterotrophic respiration and Net Biome Production (NBP). Meteorological data and crop management practices were also recorded. Climatic and seasonal evolutions of the carbon balance components were studied and crop carbon budgets were computed both at the yearly and crop rotation cycle scales. On average over the 12 years, NEE was negative but NBP was positive, i.e. as far as carbon exportation by harvest are included in the budget, the site behaved as a carbon source. Impacts of both meteorological drivers and crop management operations on CO2 exchanges were analyzed and compared between crop types, years, and rotation cycles. The uncertainties associated to the carbon fluxes were also evaluated and discussed.

  16. Description of the Karoo Biome project

    CSIR Research Space (South Africa)

    Cowling, RM

    1986-01-01

    Full Text Available The ecological characteristics and ecological problems of the karoo biome are briefly described. A conceptual basis and guidelines for the development of the Karoo Biome Project are outlined by addressing project goals, project structure...

  17. Description of the Grassland Biome Project

    CSIR Research Space (South Africa)

    Mentis, MT

    1982-10-01

    Full Text Available The objectives, organization and research programme of the Grassland Biome Project are described against a background of the biome's ecological characteristics and environmental problems. Four principal research topics wil 1 be focused upon: (i...

  18. Resistivity of Weyl semimetals NbP and TaP under pressure

    Energy Technology Data Exchange (ETDEWEB)

    Einaga, M.; Shimizu, K. [KYOKUGEN, Graduate School of Engineering Science, Osaka University, Toyonaka (Japan); Hu, J.; Mao, Z.Q. [Department of Physics and Engineering Physics, Tulane University, New Orleans, LA (United States); Politano, A. [Fondazione Istituto Italiano di Tecnologia, Graphene Labs, Genova (Italy)

    2017-08-15

    The resistivity of Weyl semimetals NbP and TaP has been investigated as a function of pressure and temperature. The behaviour of the resistivity as a function of pressure and temperature is closely correlated to the location of the Weyl points compared to the Fermi energy. The rapid increase of the resistivity in TaP and NbP under the application of 4.5 and 8.0 GPa is related with the shift of Weyl points, which affords a finite density of states near the Fermi energy. Specifically, we find that under pressure the Weyl points are situated above the Fermi energy. As regards the temperature behaviour, we detect a nonmonotonous behaviour of resistivity in TaP at 8.7 and 9.8 GPa as a function of temperature, whereas in the case of NbP the behaviour is more complicate. (copyright 2017 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim)

  19. Australia's City Food Bowls: Fertile Ground for Investigating Biomes and Food Security

    Science.gov (United States)

    Carey, Rachel; Sheridan, Jen

    2017-01-01

    Australia's major state capitals are surrounded by highly productive food bowls, which are an important source of fresh foods for their growing populations. These food producing biomes are a rich resource for investigating key themes related to Biomes and food security, one of two Year 9 units of study in the Australian Curriculum: Geography. This…

  20. Simulating economics and environmental impacts of beef and soybean systems in Brazil's Pamas and Amozon Biomes

    Science.gov (United States)

    Recent reductions in the deforestation of the Amazon biome have highlighted the need for the sustainable intensification of beef and commodity crop production in Brazil to increase agricultural productivity without accelerating adverse environmental impacts related to greenhouse gas emissions, eutro...

  1. Biosphere 2's Marsh Biome

    Science.gov (United States)

    Molnar, Jennifer; Goodridge, Kelven

    1997-01-01

    The Marsh Biome, which was modeled after the mangroves and marshes of southwest Florida, has an area of 441.2 sq m separated into three hydrologically independent sections: the Freshwater, Oligohaline and Salt Marshes. The divisions are made based on their salinity (approximately 0, 4, and 34 ppt. respectively), but they also contain different biological communities. The Freshwater and Oligohaline Marshes are mostly filled with various grasses and several trees, while the Salt Marsh houses regions of red, black, and white mangroves (Rhizophora mangle, Avicennia germinans, and Languncularia racemosa respectively). Overall, there are an estimated 80 species of plants within the biome. Water in the Salt Marsh follows a meandering stream from the algal turf scrubbers (apparatuses that clean the water of its nutrients and heavy metals while increasing dissolved oxygen levels) which have an outlet in the Salt Marsh section near sites 4 and 5 to the Fringing Red Mangrove section. The sections of the Salt Marsh are separated by walls of concrete with openings to allow the stream to flow through. Throughout this study, conducted through the months of June and July, many conditions within the biome remained fairly constant. The temperature was within a degree or two of 25 C, mostly depending on whether the sample site was in direct sunlight or shaded. The pH throughout the Salt Marsh was 8.0 +/- 0.2, and the lower salinity waters only dropped below this soon after rains. The water rdepth and dissolved oxygen varied, however, between sites.

  2. Improving the spectrophotometric determination of the alkylating activity of anticancer agents: a new insight into the mechanism of the NBP method.

    Science.gov (United States)

    Dierickx, Karen M E; Journé, Fabrice; Gerbaux, Pascal; Morandini, Renato; Kauffmann, Jean-Michel; Ghanem, Ghanem E

    2009-02-15

    In this paper, the mechanism of the nitrobenzylpyridine (NBP) method to measure the alkylating activity of drugs originally described by Epstein et al. [J. Epstein, R.W. Rosenthal, R.J. Ess, Anal. Chem. 27 (1955) 1435-1439] and modified later by others was revisited using melphalan, m-sarcolysin, chlorambucil, cyclophosphamide and ifosfamide. Its direct application to determine the activity of these drugs in human serum and aqueous media is described and discussed. This method, based on the formation of a chromophore due to the reaction between the alkylating agent and NBP, was significantly improved by extracting as quickly as possible the reaction product(s) into chloroform before adding alkali to develop the color. This significantly limited the degradation by hydrolysis of the products and enhanced the yield of the end chromophore in the organic phase. The reaction time was optimized by monitoring each compound color development. The best reaction time for each compound was selected and a higher stability of the extracted color over at least 1h was obtained (compared to a couple of minutes in previous studies). Most interestingly, water evaporation due to heating had little or no effect on the linearity of standard curves evaluated in the micromolar concentration range. Both the sensitivity and reproducibility of the method were therefore significantly improved. There appears to be a direct correlation between compound hydrolysis and alkylation activity; the relative reactivity is different among the compounds owing to the rate of (i) production, (ii) the relative proportions and (iii) the hydrolysis of the intermediates. A general mechanism for the nucleophilic competitive substitution is proposed.

  3. Anthropogenic Biomes of the World, Version 1

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World Dataset, Version 1 describes globally- significant ecological patterns within the terrestrial biosphere caused by sustained...

  4. Evidence for trivial Berry phase and absence of chiral anomaly in semimetal NbP

    Science.gov (United States)

    Sudesh; Kumar, Pawan; Neha, Prakriti; Das, Tanmoy; Patnaik, Satyabrata

    2017-04-01

    The discovery of Weyl semimetals (WSM) has brought forth the condensed matter realization of Weyl fermions, which were previously theorized as low energy excitations in high energy particle physics. Recently, transition metal mono-pnictides are under intense investigation for understanding properties of inversion-symmetry broken Weyl semimetals. Non-trivial Berry phase and chirality are important markers for characterizing topological aspects of Weyl semimetals. Most recently, theoretical calculations predict strong influence of the position of Weyl nodes with respect to Fermi surface and weak disorder that can drive WSMs into chirally symmetric Dirac semimetals. Using magneto-transport measurements in single crystals of WSM NbP, we observe an exceptionally large magnetoresistance at low temperature, which is non-saturating and linear at high fields. The origin of linear transverse magnetoresistance is assigned to charge carrier mobility fluctuations. Negative longitudinal magnetoresistance is not seen, suggesting lack of well-defined chiral anomaly in NbP. Unambiguous Shubnikov-de Haas oscillations are observed at low temperatures that are correlated to a trivial Berry phase corresponding to Fermi surface extrema at 30.5 Tesla. Our results are important towards identifying topological characteristics of Weyl semimetals and their experimental manifestations in the presence of weak disorder.

  5. Biome-BGC: Modeling Effects of Disturbance and Climate (Thornton et al. 2002)

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This archived model product contains the directions, executables, and procedures for running Biome-BGC, Version 4.1.1, to recreate the results of the...

  6. Biome-BGC: Modeling Carbon Dynamics in Ponderosa Pine Stands (Law et al. 2003)

    Data.gov (United States)

    National Aeronautics and Space Administration — This archived model product contains the directions, executables, and procedures for running Biome-BGC, Version 4.1.2, to recreate the results of the following...

  7. Literature-Derived Parameters for the BIOME-BGC Terrestrial Ecosystem Mode

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: Various aspects of primary production of a variety of plant species found in natural temperate biomes were compiled from literature and presented for use...

  8. Biome-BGC: Modeling Effects of Disturbance and Climate (Thornton et al. 2002)

    Data.gov (United States)

    National Aeronautics and Space Administration — This archived model product contains the directions, executables, and procedures for running Biome-BGC, Version 4.1.1, to recreate the results of the following...

  9. Biome-BGC: Modeling Carbon Dynamics in Ponderosa Pine Stands (Law et al. 2003)

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This archived model product contains the directions, executables, and procedures for running Biome-BGC, Version 4.1.2, to recreate the results of the...

  10. Response of vegetation to drought time-scales across global land biomes.

    Science.gov (United States)

    Vicente-Serrano, Sergio M; Gouveia, Célia; Camarero, Jesús Julio; Beguería, Santiago; Trigo, Ricardo; López-Moreno, Juan I; Azorín-Molina, César; Pasho, Edmond; Lorenzo-Lacruz, Jorge; Revuelto, Jesús; Morán-Tejeda, Enrique; Sanchez-Lorenzo, Arturo

    2013-01-02

    We evaluated the response of the Earth land biomes to drought by correlating a drought index with three global indicators of vegetation activity and growth: vegetation indices from satellite imagery, tree-ring growth series, and Aboveground Net Primary Production (ANPP) records. Arid and humid biomes are both affected by drought, and we suggest that the persistence of the water deficit (i.e., the drought time-scale) could be playing a key role in determining the sensitivity of land biomes to drought. We found that arid biomes respond to drought at short time-scales; that is, there is a rapid vegetation reaction as soon as water deficits below normal conditions occur. This may be due to the fact that plant species of arid regions have mechanisms allowing them to rapidly adapt to changing water availability. Humid biomes also respond to drought at short time-scales, but in this case the physiological mechanisms likely differ from those operating in arid biomes, as plants usually have a poor adaptability to water shortage. On the contrary, semiarid and subhumid biomes respond to drought at long time-scales, probably because plants are able to withstand water deficits, but they lack the rapid response of arid biomes to drought. These results are consistent among three vegetation parameters analyzed and across different land biomes, showing that the response of vegetation to drought depends on characteristic drought time-scales for each biome. Understanding the dominant time-scales at which drought most influences vegetation might help assessing the resistance and resilience of vegetation and improving our knowledge of vegetation vulnerability to climate change.

  11. Carbon budget over 12 years in a production crop under temperate climate

    Science.gov (United States)

    Buysse, Pauline; Bodson, Bernard; Debacq, Alain; De Ligne, Anne; Heinesch, Bernard; Manise, Tanguy; Moureaux, Christine; Aubinet, Marc

    2017-04-01

    Carbon dioxide (CO2) exchanges between crops and the atmosphere are influenced by both climatic and crop management drivers. The investigated crop, situated at the Lonzée Terrestrial Observatory (LTO, candidate ICOS site) in Belgium and managed for more than 70 years using conventional farming practices, was monitored over three complete sugar beet (or maize)/winter wheat/potato/winter wheat rotation cycles from 2004 to 2016. Continuous eddy-covariance measurements and regular biomass samplings were performed in order to obtain the daily and seasonal Net Ecosystem Exchange (NEE), Gross Primary Productivity, Total Ecosystem Respiration, Net Primary Productivity, and Net Biome Production (NBP). Meteorological data and crop management practices were also recorded. The main objectives were to analyze the CO2 flux responses to climatic drivers and to establish the C budget of the cropland. Crop type significantly influenced the measured CO2 fluxes. In addition to crop season duration, which had an obvious impact on cumulated NEE values for each crop type, the CO2 flux response to photosynthetic photon flux density, vapor pressure deficit and temperature differed between crop types, while no significant response to soil water content was observed in any of them. Besides, a significant positive relationship between crop residue amount and ecosystem respiration was observed. Over the 12 years, NEE was negative (-4.34 ± 0.21 kg C m-2) but NBP was positive (1.05 ± 0.30 kg C m-2), i.e. as soon as all lateral carbon fluxes - dominated by carbon exportation - are included in the budget, the site behaves as a carbon source. Intercrops were seen to play a major role in the carbon budget, being mostly due to the long time period it represented (59 % of the 12 year time period). An in-depth analysis of intercrop periods and, more specifically, growing cover crops (mustard in the case of our study), is developed in a companion poster (ref. abstract EGU2017-12216, session SSS9

  12. Fermi-surface topology of the Weyl semimetal NbP

    Energy Technology Data Exchange (ETDEWEB)

    Klotz, J.; Wosnitza, J. [Hochfeld-Magnetlabor (HLD-EMFL), Helmholtz-Zentrum Dresden-Rossendorf (Germany); Institut fuer Festkoerperphysik, TU Dresden (Germany); Wu, Shu-Chun; Shekhar, Chandra; Sun, Yan; Schmidt, Marcus; Nicklas, Michael; Baenitz, Michael; Felser, Claudia [Max Planck Institute for Chemical Physics of Solids, Dresden (Germany); Uhlarz, M. [Hochfeld-Magnetlabor (HLD-EMFL), Helmholtz-Zentrum Dresden-Rossendorf (Germany); Yan, Binghai [Max Planck Institute for Chemical Physics of Solids, Dresden (Germany); Max Planck Institute for the Physics of Complex Systems, Dresden (Germany)

    2016-07-01

    The recent discovery of Weyl semimetals in transition-metal monopnictides revealed an exotic topological matter. Weyl semimetals feature band crossings with massless dispersions in their bulk band structure, termed Weyl points. Here, we present a Fermi-surface study on the Weyl semimetal NbP that combines both experimental data and band-structure calculations. We employed torque magnetometry in order to measure the angular dependence of the de Haas-van Alphen effect in a 12 T / 350 mK system. The excellent agreement between measured and calculated quantum-oscillation frequencies evidences the existence of two electron and two hole pockets and allows to locate the position of the Weyl points with respect to the Fermi energy.

  13. Temporal profiles of vegetation indices for characterizing grazing intensity on natural grasslands in Pampa biome

    OpenAIRE

    Junges,Amanda Heemann; Bremm,Carolina; Fontana,Denise Cybis; Oliveira,Carlos Alberto Oliveira de; Schaparini,Laura Pigatto; Carvalho,Paulo César de Faccio

    2016-01-01

    ABSTRACT The Pampa biome is an important ecosystem in Brazil that is highly relevant to livestock production. The objective of this study was to analyze the potential use of vegetation indices to discriminate grazing intensities on natural grasslands in the Pampa biome. Moderate Resolution Imaging Spectroradiometer (MODIS) Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI) images from Jan to Dec, 2000 to 2013 series, were analyzed for natural grassland experimen...

  14. Forest resilience to drought varies across biomes.

    Science.gov (United States)

    Gazol, Antonio; Camarero, Jesus Julio; Vicente-Serrano, Sergio M; Sánchez-Salguero, Raúl; Gutiérrez, Emilia; de Luis, Martin; Sangüesa-Barreda, Gabriel; Novak, Klemen; Rozas, Vicente; Tíscar, Pedro A; Linares, Juan C; Martín-Hernández, Natalia; Martínez Del Castillo, Edurne; Ribas, Montse; García-González, Ignacio; Silla, Fernando; Camisón, Alvaro; Génova, Mar; Olano, José M; Longares, Luis A; Hevia, Andrea; Tomás-Burguera, Miquel; Galván, J Diego

    2018-05-01

    Forecasted increase drought frequency and severity may drive worldwide declines in forest productivity. Species-level responses to a drier world are likely to be influenced by their functional traits. Here, we analyse forest resilience to drought using an extensive network of tree-ring width data and satellite imagery. We compiled proxies of forest growth and productivity (TRWi, absolutely dated ring-width indices; NDVI, Normalized Difference Vegetation Index) for 11 tree species and 502 forests in Spain corresponding to Mediterranean, temperate, and continental biomes. Four different components of forest resilience to drought were calculated based on TRWi and NDVI data before, during, and after four major droughts (1986, 1994-1995, 1999, and 2005), and pointed out that TRWi data were more sensitive metrics of forest resilience to drought than NDVI data. Resilience was related to both drought severity and forest composition. Evergreen gymnosperms dominating semi-arid Mediterranean forests showed the lowest resistance to drought, but higher recovery than deciduous angiosperms dominating humid temperate forests. Moreover, semi-arid gymnosperm forests presented a negative temporal trend in the resistance to drought, but this pattern was absent in continental and temperate forests. Although gymnosperms in dry Mediterranean forests showed a faster recovery after drought, their recovery potential could be constrained if droughts become more frequent. Conversely, angiosperms and gymnosperms inhabiting temperate and continental sites might have problems to recover after more intense droughts since they resist drought but are less able to recover afterwards. © 2018 John Wiley & Sons Ltd.

  15. Thresholds for boreal biome transitions.

    Science.gov (United States)

    Scheffer, Marten; Hirota, Marina; Holmgren, Milena; Van Nes, Egbert H; Chapin, F Stuart

    2012-12-26

    Although the boreal region is warming twice as fast as the global average, the way in which the vast boreal forests and tundras may respond is poorly understood. Using satellite data, we reveal marked alternative modes in the frequency distributions of boreal tree cover. At the northern end and at the dry continental southern extremes, treeless tundra and steppe, respectively, are the only possible states. However, over a broad intermediate temperature range, these treeless states coexist with boreal forest (∼75% tree cover) and with two more open woodland states (∼20% and ∼45% tree cover). Intermediate tree covers (e.g., ∼10%, ∼30%, and ∼60% tree cover) between these distinct states are relatively rare, suggesting that they may represent unstable states where the system dwells only transiently. Mechanisms for such instabilities remain to be unraveled, but our results have important implications for the anticipated response of these ecosystems to climatic change. The data reveal that boreal forest shows no gradual decline in tree cover toward its limits. Instead, our analysis suggests that it becomes less resilient in the sense that it may more easily shift into a sparse woodland or treeless state. Similarly, the relative scarcity of the intermediate ∼10% tree cover suggests that tundra may shift relatively abruptly to a more abundant tree cover. If our inferences are correct, climate change may invoke massive nonlinear shifts in boreal biomes.

  16. Description of the Fynbos Biome Project

    CSIR Research Space (South Africa)

    Kruger, FJ

    1978-06-01

    Full Text Available The objectives, organization and research programme of the Fynbos Biome Project being undertaken in the south-west and southern Cape are described. The project is a cooperative multi-disciplinary study of the ecological characteristics, structure...

  17. Anthropogenic Biomes of the World, Version 1

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 1 data set describes globally-significant ecological patterns within the terrestrial biosphere caused by sustained...

  18. The extent of forest in dryland biomes

    Science.gov (United States)

    Jean-Francois Bastin; Nora Berrahmouni; Alan Grainger; Danae Maniatis; Danilo Mollicone; Rebecca Moore; Chiara Patriarca; Nicolas Picard; Ben Sparrow; Elena Maria Abraham; Kamel Aloui; Ayhan Atesoglu; Fabio Attore; Caglar Bassullu; Adia Bey; Monica Garzuglia; Luis G. GarcÌa-Montero; Nikee Groot; Greg Guerin; Lars Laestadius; Andrew J. Lowe; Bako Mamane; Giulio Marchi; Paul Patterson; Marcelo Rezende; Stefano Ricci; Ignacio Salcedo; Alfonso Sanchez-Paus Diaz; Fred Stolle; Venera Surappaeva; Rene Castro

    2017-01-01

    Dryland biomes cover two-fifths of Earth’s land surface, but their forest area is poorly known. Here, we report an estimate of global forest extent in dryland biomes, based on analyzing more than 210,000 0.5-hectare sample plots through a photo-interpretation approach using large databases of satellite imagery at (i) very high spatial resolution and (ii) very high...

  19. High-pressure phases of Weyl semimetals NbP, NbAs, TaP, and TaAs

    Science.gov (United States)

    Guo, ZhaoPeng; Lu, PengChao; Chen, Tong; Wu, JueFei; Sun, Jian; Xing, DingYu

    2018-03-01

    In this study, we used the crystal structure search method and first-principles calculations to systematically explore the highpressure phase diagrams of the TaAs family (NbP, NbAs, TaP, and TaAs). Our calculation results show that NbAs and TaAs have similar phase diagrams, the same structural phase transition sequence I41 md→ P6¯ m2→ P21/ c→ Pm3¯ m, and slightly different transition pressures. The phase transition sequence of NbP and TaP differs somewhat from that of NbAs and TaAs, in which new structures emerge, such as the Cmcm structure in NbP and the Pmmn structure in TaP. Interestingly, we found that in the electronic structure of the high-pressure phase P6¯ m2-NbAs, there are coexistingWeyl points and triple degenerate points, similar to those found in high-pressure P6¯ m2-TaAs.

  20. The underestimated biodiversity of tropical grassy biomes.

    Science.gov (United States)

    Murphy, Brett P; Andersen, Alan N; Parr, Catherine L

    2016-09-19

    For decades, there has been enormous scientific interest in tropical savannahs and grasslands, fuelled by the recognition that they are a dynamic and potentially unstable biome, requiring periodic disturbance for their maintenance. However, that scientific interest has not translated into widespread appreciation of, and concern about threats to, their biodiversity. In terms of biodiversity, grassy biomes are considered poor cousins of the other dominant biome of the tropics-forests. Simple notions of grassy biomes being species-poor cannot be supported; for some key taxa, such as vascular plants, this may be valid, but for others it is not. Here, we use an analysis of existing data to demonstrate that high-rainfall tropical grassy biomes (TGBs) have vertebrate species richness comparable with that of forests, despite having lower plant diversity. The Neotropics stand out in terms of both overall vertebrate species richness and number of range-restricted vertebrate species in TGBs. Given high rates of land-cover conversion in Neotropical grassy biomes, they should be a high priority for conservation and greater inclusion in protected areas. Fire needs to be actively maintained in these systems, and in many cases re-introduced after decades of inappropriate fire exclusion. The relative intactness of TGBs in Africa and Australia make them the least vulnerable to biodiversity loss in the immediate future. We argue that, like forests, TGBs should be recognized as a critical-but increasingly threatened-store of global biodiversity.This article is part of the themed issue 'Tropical grassy biomes: linking ecology, human use and conservation'. © 2016 The Author(s).

  1. Disturbance and the dynamics of fynbos biome communities

    CSIR Research Space (South Africa)

    Cowling, RM

    1987-01-01

    Full Text Available This volume comprises invited review and research papers dealing with the effects of disturbance on the dynamics of fynbos biome communities. Since fire is the most important disturbance factor in the biome, most contributions concentrate...

  2. Global climate and the distribution of plant biomes.

    Science.gov (United States)

    Woodward, F I; Lomas, M R; Kelly, C K

    2004-10-29

    Biomes are areas of vegetation that are characterized by the same life-form. Traditional definitions of biomes have also included either geographical or climatic descriptors. This approach describes a wide range of biomes that can be correlated with characteristic climatic conditions, or climatic envelopes. The application of remote sensing technology to the frequent observation of biomes has led to a move away from the often subjective definition of biomes to one that is objective. Carefully characterized observations of life-form, by satellite, have been used to reconsider biome classification and their climatic envelopes. Five major tree biomes can be recognized by satellites based on leaf longevity and morphology: needleleaf evergreen, broadleaf evergreen, needleleaf deciduous, broadleaf cold deciduous and broadleaf drought deciduous. Observations indicate that broadleaf drought deciduous vegetation grades substantially into broadleaf evergreen vegetation. The needleleaf deciduous biome occurs in the world's coldest climates, where summer drought and therefore a drought deciduous biome are absent. Traditional biome definitions are quite static, implying no change in their life-form composition with time, within their particular climatic envelopes. However, this is not the case where there has been global ingress of grasslands and croplands into forested vegetation. The global spread of grasses, a new super-biome, was probably initiated 30-45 Myr ago by an increase in global aridity, and was driven by the natural spread of the disturbances of fire and animal grazing. These disturbances have been further extended over the Holocene era by human activities that have increased the land areas available for domestic animal grazing and for growing crops. The current situation is that grasses now occur in most, if not all biomes, and in many areas they dominate and define the biome. Croplands are also increasing, defining a new and relatively recent component to the

  3. On coupling global biome models with climate models

    International Nuclear Information System (INIS)

    Claussen, M.

    1994-01-01

    The BIOME model of Prentice et al. (1992), which predicts global vegetation patterns in equilibrium with climate, is coupled with the ECHAM climate model of the Max-Planck-Institut fuer Meteorologie, Hamburg. It is found that incorporation of the BIOME model into ECHAM, regardless at which frequency, does not enhance the simulated climate variability, expressed in terms of differences between global vegetation patterns. Strongest changes are seen only between the initial biome distribution and the biome distribution computed after the first simulation period, provided that the climate-biome model is started from a biome distribution that resembles the present-day distribution. After the first simulation period, there is no significant shrinking, expanding, or shifting of biomes. Likewise, no trend is seen in global averages of land-surface parameters and climate variables. (orig.)

  4. Concluding remarks: overall impacts on biodiversity and future perspectives for conservation in the Pantanal biome

    Directory of Open Access Journals (Sweden)

    CJR. Alho

    Full Text Available The Pantanal biome is characterised by seasonal flooding which determines specific ecosystem processes, with the occurrence of adapted plants and animals to the annual shrinking and expansion of habitats due to the seasonal hydrological regime. Biodiversity abundance varies during the dry and wet seasons. The Pantanal's biodiversity is a fundamental component of ecosystem services for human society, including nutrient cycling, fish production, ecotourism, carbon storage, flood control, among others, which are relevant to regional and global environmental consequences. The biome has been impacted by the conversion of natural vegetation into agricultural fields and pasture for cattle raising, with alteration and loss of natural habitats and biodiversity. Major negative impacts occur in uplands, with drastic deforestation of savanna vegetation, where main rivers feeding the Pantanal have their springs. This article discusses future needs and priorities for ecological research, in order to better understand the biome's natural system, to achieve conservation and sustainable use.

  5. Concluding remarks: overall impacts on biodiversity and future perspectives for conservation in the Pantanal biome.

    Science.gov (United States)

    Alho, C J R

    2011-04-01

    The Pantanal biome is characterised by seasonal flooding which determines specific ecosystem processes, with the occurrence of adapted plants and animals to the annual shrinking and expansion of habitats due to the seasonal hydrological regime. Biodiversity abundance varies during the dry and wet seasons. The Pantanal's biodiversity is a fundamental component of ecosystem services for human society, including nutrient cycling, fish production, ecotourism, carbon storage, flood control, among others, which are relevant to regional and global environmental consequences. The biome has been impacted by the conversion of natural vegetation into agricultural fields and pasture for cattle raising, with alteration and loss of natural habitats and biodiversity. Major negative impacts occur in uplands, with drastic deforestation of savanna vegetation, where main rivers feeding the Pantanal have their springs. This article discusses future needs and priorities for ecological research, in order to better understand the biome's natural system, to achieve conservation and sustainable use.

  6. Magnetic torque study of Weyl semimetal compounds TaP and NbP up to 45 Tesla

    Science.gov (United States)

    Li, Gang; Asaba, Tomoya; Tinsman, Colin; Yu, Fan; Lawson, Benjamin; Chen, Yulin; Li, Lu

    Weyl semimetal is a recently proposed new state in condensed matter physics, in which the bulk bands could have three dimensional linear dispersion but the degeneracy at the cross point is lifted into a pair of Weyl points with opposite chirality. Among the predicted candidates, Tantalum monophorspide (TaP) and Niobium monophorspide (NbP) have the simplest composition and do not require extrinsic tuning. Photoemission data is accumulating and the unique Fermi-arc surface state is observed. Magnetotransport experiments has shown highly anisotropic magnetoresistance and quantum oscillations has been observed. Because both linear dispersive bands and conventional bands exist in these materials, a detailed study of the electronic strucuture of the bulk is highly desirable. We use torque magnetometry to study quantum oscillations of TaP and NbP down to 300 mK, and up to 45 Tesla, with focus on the angular dependence of oscillation frequencies. Our comparison shows clear difference in geometry of different bulk bands in these materials. Besides, a discussion will be made on high field torque data since 45 Tesla is high enough to push several of the bands into quantum limit.

  7. The extent of forest in dryland biomes.

    Science.gov (United States)

    Bastin, Jean-François; Berrahmouni, Nora; Grainger, Alan; Maniatis, Danae; Mollicone, Danilo; Moore, Rebecca; Patriarca, Chiara; Picard, Nicolas; Sparrow, Ben; Abraham, Elena Maria; Aloui, Kamel; Atesoglu, Ayhan; Attore, Fabio; Bassüllü, Çağlar; Bey, Adia; Garzuglia, Monica; García-Montero, Luis G; Groot, Nikée; Guerin, Greg; Laestadius, Lars; Lowe, Andrew J; Mamane, Bako; Marchi, Giulio; Patterson, Paul; Rezende, Marcelo; Ricci, Stefano; Salcedo, Ignacio; Diaz, Alfonso Sanchez-Paus; Stolle, Fred; Surappaeva, Venera; Castro, Rene

    2017-05-12

    Dryland biomes cover two-fifths of Earth's land surface, but their forest area is poorly known. Here, we report an estimate of global forest extent in dryland biomes, based on analyzing more than 210,000 0.5-hectare sample plots through a photo-interpretation approach using large databases of satellite imagery at (i) very high spatial resolution and (ii) very high temporal resolution, which are available through the Google Earth platform. We show that in 2015, 1327 million hectares of drylands had more than 10% tree-cover, and 1079 million hectares comprised forest. Our estimate is 40 to 47% higher than previous estimates, corresponding to 467 million hectares of forest that have never been reported before. This increases current estimates of global forest cover by at least 9%. Copyright © 2017, American Association for the Advancement of Science.

  8. Surging wildfire activity in a grassland biome

    Science.gov (United States)

    Donovan, Victoria M.; Wonkka, Carissa L.; Twidwell, Dirac

    2017-06-01

    Rapid changes in wildfire patterns are documented globally, increasing pressure to identify regions that may experience increases in wildfire in future decades. Temperate grassland and savanna biomes were some of the most frequently burned regions on Earth; however, large wildfires have been largely absent from the Great Plains of North America over the last century. In this paper, we conduct an in-depth analysis of changes in large wildfire (>400 ha) regime characteristics over a 30 year period across the Great Plains. For the entire biome, (i) the average number of large wildfires increased from 33.4 ± 5.6 per year from 1985 to 1994 to 116.8 ± 28.8 wildfires per year from 2005 to 2014, (ii) total area burned by large wildfires increased 400%, (iii) over half the ecoregions had greater than a 70% probability of a large wildfire occurring in the last decade, and (iv) seasonality of large wildfires remained relatively similar.

  9. The Brazilian Pampa: A Fragile Biome

    Directory of Open Access Journals (Sweden)

    Valdir Marcos Stefenon

    2009-12-01

    Full Text Available Biodiversity is one of the most fundamental properties of Nature. It underpins the stability of ecosystems, provides vast bioresources for economic use, and has important cultural significance for many people. The Pampa biome, located in the southernmost state of Brazil, Rio Grande do Sul, illustrates the direct and indirect interdependence of humans and biodiversity. The Brazilian Pampa lies within the South Temperate Zone where grasslands scattered with shrubs and trees are the dominant vegetation. The soil, originating from sedimentary rocks, often has an extremely sandy texture that makes them fragile—highly prone to water and wind erosion. Human activities have converted or degraded many areas of this biome. In this review we discuss our state-of-the-art knowledge of the diversity and the major biological features of this regions and the cultural factors that have shaped it. Our aim is to contribute toward a better understanding of the current status of this special biome and to describe how the interaction between human activities and environment affects the region, highlighting the fragility of the Brazilian Pampa.

  10. Guide to the literature on research in the grassland biome of South Africa

    CSIR Research Space (South Africa)

    Tainton, MN

    1984-12-01

    Full Text Available the development of an understanding of how these communities can best be managed to ensure their sustained producti¬vity, or indeed to increase their productivity. This publication serves to highlight the main work which has been undertaken in this biome...

  11. Interaction between Nbp35 and Cfd1 proteins of cytosolic Fe-S cluster assembly reveals a stable complex formation in Entamoeba histolytica.

    Directory of Open Access Journals (Sweden)

    Shadab Anwar

    Full Text Available Iron-Sulfur (Fe-S proteins are involved in many biological functions such as electron transport, photosynthesis, regulation of gene expression and enzymatic activities. Biosynthesis and transfer of Fe-S clusters depend on Fe-S clusters assembly processes such as ISC, SUF, NIF, and CIA systems. Unlike other eukaryotes which possess ISC and CIA systems, amitochondriate Entamoeba histolytica has retained NIF & CIA systems for Fe-S cluster assembly in the cytosol. In the present study, we have elucidated interaction between two proteins of E. histolytica CIA system, Cytosolic Fe-S cluster deficient 1 (Cfd1 protein and Nucleotide binding protein 35 (Nbp35. In-silico analysis showed that structural regions ranging from amino acid residues (P33-K35, G131-V135 and I147-E151 of Nbp35 and (G5-V6, M34-D39 and G46-A52 of Cfd1 are involved in the formation of protein-protein complex. Furthermore, Molecular dynamic (MD simulations study suggested that hydrophobic forces surpass over hydrophilic forces between Nbp35 and Cfd1 and Van-der-Waal interaction plays crucial role in the formation of stable complex. Both proteins were separately cloned, expressed as recombinant fusion proteins in E. coli and purified to homogeneity by affinity column chromatography. Physical interaction between Nbp35 and Cfd1 proteins was confirmed in vitro by co-purification of recombinant Nbp35 with thrombin digested Cfd1 and in vivo by pull down assay and immunoprecipitation. The insilico, in vitro as well as in vivo results prove a stable interaction between these two proteins, supporting the possibility of its involvement in Fe-S cluster transfer to target apo-proteins through CIA machinery in E. histolytica. Our study indicates that initial synthesis of a Fe-S precursor in mitochondria is not necessary for the formation of Cfd1-Nbp35 complex. Thus, Cfd1 and Nbp35 with the help of cytosolic NifS and NifU proteins can participate in the maturation of non-mitosomal Fe-S proteins

  12. Hantavirus pulmonary syndrome and rodent reservoirs in the savanna-like biome of Brazil's southeastern region.

    Science.gov (United States)

    Limongi, J E; Oliveira, R C; Guterres, A; Costa Neto, S F; Fernandes, J; Vicente, L H B; Coelho, M G; Ramos, V N; Ferreira, M S; Bonvicino, C R; D'Andrea, P S; Lemos, E R S

    2016-04-01

    This paper describes the diversity of rodent fauna in an area endemic for hantavirus cardiopulmonary syndrome (HCPS) in Brazil, the population dynamics and the relationship of rodents with hantavirus in the Cerrado (savanna-like) biome. Additionally, an analysis is made of the partial S segment sequences of the hantaviruses obtained from serologically confirmed human HCPS cases and from rodent specimens. Rodents were collected during four campaigns. Human serum samples were collected from suspected cases of HCPS at hospitals in the state of Minas Gerais. The samples antibody-reactive by ELISA were processed by RT-PCR. The PCR product was amplified and sequenced. Hantavirus was detected only in Necromys lasiurus, the wild rodent species most prevalent in the Cerrado biome (min-max: 50-83·7%). All the six human serum samples were hantavirus seropositive and five showed amplified PCR products. The analysis of the nucleotide sequences showed the circulation of a single genotype, the Araraquara hantavirus. The environmental changes that have occurred in the Cerrado biome in recent decades have favoured N. lasiurus in interspecific competition of habitats, thus increasing the risk of contact between humans and rodent species infected with hantavirus. Our data corroborate the definition of N. lasiurus as the main hantavirus reservoir in the Cerrado biome.

  13. La filatelia biomédica

    OpenAIRE

    Emilio J.A. Roldán; Claudio Zuckerberg

    2011-01-01

    La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ay...

  14. Airborne remote sensing of forest biomes

    Science.gov (United States)

    Sader, Steven A.

    1987-01-01

    Airborne sensor data of forest biomes obtained using an SAR, a laser profiler, an IR MSS, and a TM simulator are presented and examined. The SAR was utilized to investigate forest canopy structures in Mississippi and Costa Rica; the IR MSS measured forest canopy temperatures in Oregon and Puerto Rico; the TM simulator was employed in a tropical forest in Puerto Rico; and the laser profiler studied forest canopy characteristics in Costa Rica. The advantages and disadvantages of airborne systems are discussed. It is noted that the airborne sensors provide measurements applicable to forest monitoring programs.

  15. Anthropogenic Biomes of the World, Version 2: 1800

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1800 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

  16. Anthropogenic Biomes of the World, Version 2: 1900

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1900 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

  17. Anthropogenic Biomes of the World, Version 2: 2000

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 2000 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

  18. Anthropogenic Biomes of the World, Version 2: 1700

    Data.gov (United States)

    National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1700 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

  19. La filatelia biomédica

    Directory of Open Access Journals (Sweden)

    Emilio J.A. Roldán

    2011-02-01

    Full Text Available La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ayuda de las víctimas del terremoto de San Juan. Florentino Ameghino es el primer científico incluido en 1954, y en 1967 se edita un sello conmemorativo de la Dra. Cecilia Grierson. La filatelia argentina luego reconoce varios de nuestros científicos y médicos, congresos, universidades, campañas sanitarias, temas de odontología, farmacia, enfermería y otros, generando un amplio material filatélico en reconocimiento del valor social que la ciencia biomédica argentina ha logrado en el contexto propio e internacional. Posiblemente sea un científico, el Dr. Bernardo Houssay, uno de los argentinos más veces editado en distintos sellos postales de la filatelia mundial.

  20. BioMe: biologically relevant metals

    Science.gov (United States)

    Tus, Alan; Rakipović, Alen; Peretin, Goran; Tomić, Sanja; Šikić, Mile

    2012-01-01

    In this article, we introduce BioMe (biologically relevant metals), a web-based platform for calculation of various statistical properties of metal-binding sites. Users can obtain the following statistical properties: presence of selected ligands in metal coordination sphere, distribution of coordination numbers, percentage of metal ions coordinated by the combination of selected ligands, distribution of monodentate and bidentate metal-carboxyl, bindings for ASP and GLU, percentage of particular binuclear metal centers, distribution of coordination geometry, descriptive statistics for a metal ion–donor distance and percentage of the selected metal ions coordinated by each of the selected ligands. Statistics is presented in numerical and graphical forms. The underlying database contains information about all contacts within the range of 3 Å from a metal ion found in the asymmetric crystal unit. The stored information for each metal ion includes Protein Data Bank code, structure determination method, types of metal-binding chains [protein, ribonucleic acid (RNA), deoxyribonucleic acid (DNA), water and other] and names of the bounded ligands (amino acid residue, RNA nucleotide, DNA nucleotide, water and other) and the coordination number, the coordination geometry and, if applicable, another metal(s). BioMe is on a regular weekly update schedule. It is accessible at http://metals.zesoi.fer.hr. PMID:22693222

  1. Forest carbon emissions from cropland expansion in the Brazilian Cerrado biome

    Science.gov (United States)

    Noojipady, Praveen; Morton, C. Douglas; Macedo, N. Marcia; Victoria, C. Daniel; Huang, Chengquan; Gibbs, K. Holly; Edson Bolfe, L.

    2017-02-01

    Land use, land use change, and forestry accounted for two-thirds of Brazil’s greenhouse gas emissions profile in 2005. Amazon deforestation has declined by more than 80% over the past decade, yet Brazil’s forests extend beyond the Amazon biome. Rapid expansion of cropland in the neighboring Cerrado biome has the potential to undermine climate mitigation efforts if emissions from dry forest and woodland conversion negate some of the benefits of avoided Amazon deforestation. Here, we used satellite data on cropland expansion, forest cover, and vegetation carbon stocks to estimate annual gross forest carbon emissions from cropland expansion in the Cerrado biome. Nearly half of the Cerrado met Brazil’s definition of forest cover in 2000 (≥0.5 ha with ≥10% canopy cover). In areas of established crop production, conversion of both forest and non-forest Cerrado formations for cropland declined during 2003-2013. However, forest carbon emissions from cropland expansion increased over the past decade in Matopiba, a new frontier of agricultural production that includes portions of Maranhão, Tocantins, Piauí, and Bahia states. Gross carbon emissions from cropland expansion in the Cerrado averaged 16.28 Tg C yr-1 between 2003 and 2013, with forest-to-cropland conversion accounting for 29% of emissions. The fraction of forest carbon emissions from Matopiba was much higher; between 2010-2013, large-scale cropland conversion in Matopiba contributed 45% of total Cerrado forest carbon emissions. Carbon emissions from Cerrado-to-cropland transitions offset 5%-7% of the avoided emissions from reduced Amazon deforestation rates during 2011-2013. Comprehensive national estimates of forest carbon fluxes, including all biomes, are critical to detect cross-biome leakage within countries and achieve climate mitigation targets to reduce emissions from land use, land use change, and forestry.

  2. NPP Multi-Biome: Global Primary Production Data Initiative Products

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: Under the auspices of the GPPDI, NPP estimates were compiled for 2,523 sites and 5,164 half-degree grid cells, by investigators based at the Environmental...

  3. Climate-biomes, pedo-biomes and pyro-biomes: which world view explains the tropical forest - savanna boundary in South America?

    Science.gov (United States)

    Langan, Liam; Higgins, Steven; Scheiter, Simon

    2015-04-01

    Elucidating the drivers of broad vegetation formations improves our understanding of earth system functioning. The biome, defined primarily by the dominance of a particular growth strategy, is commonly employed to group vegetation into similar units. Predicting tropical forest and savanna biome boundaries in South America has proven difficult. Process based DGVMs (Dynamic global vegetation models) are our best tool to simulate vegetation patterns, make predictions for future changes and test theory, however, many DGVMs fail to accurately simulate the spatial distribution or indeed presence of the South American savanna biome which can result in large differences in modelled ecosystem structural properties. Evidence suggests fire plays a significant role in mediating these forest and savanna biome boundaries, however, fire alone does not appear to be sufficient to predict these boundaries in South America using DGVMs hinting at the presence of one or more missing environmental factors. We hypothesise that soil depth, which affects plant available water by determining maximum storage potential and influences temporal availability, may be one of these missing environmental factors. To test our hypothesis we use a novel vegetation model, the aDGVM2. This model has been specifically designed to allow plant trait strategies, constrained by trade-offs between traits, evolve based on the abiotic and biotic conditions where the resulting community trait suites are emergent properties of model dynamics. Furthermore it considers root biomass in multiple soil layers and therefore allows the consideration of alternative rooting strategies, which in turn allows us to explore in more detail the role of soil hydraulic factors in controlling biome boundary distributions. We find that changes in soil depth, interacting with fire, affect the relative dominance of tree and grass strategies and thus the presence and spatial distribution of forest and savanna biomes in South America

  4. An Overview of the BIOMed Project.

    Science.gov (United States)

    Mantas, John; Wageih, Mohamed A

    2017-01-01

    The purpose is to: 1) foster the national BioMedical Informatics (BMI) foundation aligning with the international medical informatics association (IMIA) in order to remodel the national strategies; 2) structure the BMHI strategic plans in Egypt and Jordan as models for other Arab States; 3) define the requirements for new joint EU-Mediterranean BMHI projects and initiatives; and 4) encourage and support the BMHI centres of excellence in Egypt and Jordan. BIOMed will synergistically apply up-to-date European and International methodologies & standards. The pre-defined challenges were integrating multiple segregated BMHI initiatives and policies; overcoming obstructions- socio, political, economic; recommendation adaptation, assessing the current and proposed solutions; defining the national health systems real demands; identifying different European best practices. Political instability in the Middle East after the Arab Spring in 2011 added further challenges as well as improved the importance of the EU-MENA (EU and Middle East and North Africa) cooperation.

  5. Montane plant environments in the Fynbos Biome

    Directory of Open Access Journals (Sweden)

    B. M. Campbell

    1983-12-01

    Full Text Available Environmental data collected at 507 plots on 22 transects, and soil analytical data from 81 of these plots, have been used to describe the plant environments of the mountains in the Fynbos Biome. Two major regional gradients are recognized: a west-east gradient and a coast-interior gradient. Of particular consequence for fynbos-environment studies is the increase in the proportion of fine soil particles from west to east. At least some aspects of soil fertility also increase towards the east. The edaphic changes are paralleled by climatic changes: chiefly a decrease in the severity of summer drought towards the east. On the coast-interior gradient a major non-climatic variable in the gradient is rock cover. High rock cover is a feature of the interior ranges. Soils with organic horizons or with E horizons are a feature on the coastal mountains, but are generally lacking on the interior mountains. The other environmental gradients recognized occur on individual transects and all include edaphic variables. The rockiness-soil depth gradient, on which an increase in rockiness is associated with a decrease in soil depth and usually a decrease in clay content, tends to occur in three situations. Firstly, it is associated with local topographic variation; the shallow, rocky soils being a feature of the steeper slopes. Secondly, it is associated with the aspect gradient; the hot, dry northern aspects having shallow, rocky, less developed soils. Thirdly, it tends to be associated with the altitude-rainfall gradient: shallower soils being found at higher altitudes. It is also at higher altitudes that higher rainfall is found. Variation in oxidizable carbon is chiefly accounted for by the altitude-rainfall gradient. Whereas at a biome-wide level, aspects of soil fertility are related to soil texture, it appears that on individual transects fertility is linked to amounts of plant remains in the soil and to rainfall. Apart from these gradients, which are

  6. The Use of Fire Radiative Power to Estimate the Biomass Consumption Coefficient for Temperate Grasslands in the Atlantic Forest Biome

    Directory of Open Access Journals (Sweden)

    Bibiana Salvador Cabral da Costa

    Full Text Available Abstract Every year, many active fire spots are identified in the satellite images of the southern Brazilian grasslands in the Atlantic Forest biome and Pampa biome. Fire Radiative Power (FRP is a technique that uses remotely sensed data to quantify burned biomass. FRP measures the radiant energy released per time unit by burning vegetation. This study aims to use satellite and field data to estimate the biomass consumption rate and the biomass consumption coefficient for the southern Brazilian grasslands. Three fire points were identified in satellite FRP products. These data were combined with field data, collected through literature review, to calculate the biomass consumption coefficient. The type of vegetation is an important variable in the estimation of the biomass consumption coefficient. The biomass consumption rate was estimated to be 2.237 kg s-1 for the southern Brazilian grasslands in Atlantic Forest biome, and the biomass consumption coefficient was estimated to be 0.242 kg MJ-1.

  7. Biomass allocation patterns across China's terrestrial biomes.

    Directory of Open Access Journals (Sweden)

    Limei Wang

    Full Text Available Root to shoot ratio (RS is commonly used to describe the biomass allocation between below- and aboveground parts of plants. Determining the key factors influencing RS and interpreting the relationship between RS and environmental factors is important for biological and ecological research. In this study, we compiled 2088 pairs of root and shoot biomass data across China's terrestrial biomes to examine variations in the RS and its responses to biotic and abiotic factors including vegetation type, soil texture, climatic variables, and stand age. The median value of RS (RSm for grasslands, shrublands, and forests was 6.0, 0.73, and 0.23, respectively. The range of RS was considerably wide for each vegetation type. RS values for all three major vegetation types were found to be significantly correlated to mean annual precipitation (MAP and potential water deficit index (PWDI. Mean annual temperature (MAT also significantly affect the RS for forests and grasslands. Soil texture and forest origin altered the response of RS to climatic factors as well. An allometric formula could be used to well quantify the relationship between aboveground and belowground biomass, although each vegetation type had its own inherent allometric relationship.

  8. Structural characterization of vegetation in the fynbos biome

    CSIR Research Space (South Africa)

    Campbell, BM

    1981-08-01

    Full Text Available A proposed system for the standardization of descriptive terminology for structural characterization of vegetation in the Fynbos Biome is presented in tabular form. Specific applications of the system are described and illustrations of some...

  9. Using an Exploratory Internet Activity & Trivia Game to Teach Students about Biomes

    Science.gov (United States)

    Richardson, Matthew L.

    2009-01-01

    Students in life science classes need an introduction to biomes, including an introduction to the concept, key biotic and abiotic features of biomes, and geographic locations of biomes. In this activity, students in seventh- and eighth-grade science classes used a directed exploratory Internet activity to learn about biomes. The author tested…

  10. Magnetic resonance as a local probe for linear bands in the Weyl semimetals NbP and TaP

    Energy Technology Data Exchange (ETDEWEB)

    Baenitz, Michael; Yasuoka, Hiroshi; Majumder, Mayukh; Shekhar, Chandra; Yan, Binghai; Felser, Claudia; Schmidt, Marcus [MPI for Chemical Physics of Solids, Dresden (Germany)

    2016-07-01

    Some compensated d-electron semimetals, for example the monophosphites NbP and TaP, with non centrosymmetric structure and with sizable spin orbit coupling (SOC) form a new class of material: the Weyl semimetals (WSM). A unique linear crossing of valence- and conduction- band in a single point in reciprocal space defines the so called Weyl point where the fermion mass vanishes theoretically. In real materials the Fermi level E{sub F} does not exactly match the Weyl node and as a consequence residual very light fermions are found. Due to the SOC these Weyl fermions have a chirality (handedness) on their linear dispersive (E ∝k) bands and frequently a linear density of states (DOS) at the Fermi level E{sub F}. We use NMR as a probe for this linear d- electron bands. The shift provides the s- and d- electron contributions to the DOS at E{sub F}, whereas the spin lattice relaxation is governed by low energy excitations around E{sub F}. {sup 31}P (I = 1/2) - Fourier - transform - and {sup 95}Nb (I = 9/2) - broadline - sweep - NMR studies are performed. We investigated powder samples as well as single crystals on both systems. The angular dependence of the {sup 95}Nb- and {sup 31}P - NMR lines is discussed.

  11. Negative magnetoresistance in Weyl semimetals NbAs and NbP: Intrinsic chiral anomaly and extrinsic effects

    Science.gov (United States)

    Li, Yupeng; Wang, Zhen; Li, Pengshan; Yang, Xiaojun; Shen, Zhixuan; Sheng, Feng; Li, Xiaodong; Lu, Yunhao; Zheng, Yi; Xu, Zhu-An

    2017-06-01

    Chiral anomaly-induced negative magnetoresistance (NMR) has been widely used as critical transport evidence for the existence of Weyl fermions in topological semimetals. In this mini-review, we discuss the general observation of NMR phenomena in non-centrosymmetric NbP and NbAs. We show that NMR can arise from the intrinsic chiral anomaly of Weyl fermions and/or extrinsic effects, such as the superimposition of Hall signals; field-dependent inhomogeneous current flow in the bulk, i.e., current jetting; and weak localization (WL) of coexistent trivial carriers. The WL-controlled NMR is heavily dependent on sample quality and is characterized by a pronounced crossover from positive to negative MR growth at elevated temperatures, resulting from the competition between the phase coherence time and the spin-orbital scattering constant of the bulk trivial pockets. Thus, the correlation between the NMR and the chiral anomaly need to be scrutinized without the support of complimentary techniques. Because of the lifting of spin degeneracy, the spin orientations of Weyl fermions are either parallel or antiparallel to the momentum, which is a unique physical property known as helicity. The conservation of helicity provides strong protection for the transport of Weyl fermions, which can only be effectively scattered by magnetic impurities. Chemical doping with magnetic and non-magnetic impurities is thus more convincing than the NMR method for detecting the existence of Weyl fermions.

  12. Diverging responses of tropical Andean biomes under future climate conditions.

    Science.gov (United States)

    Tovar, Carolina; Arnillas, Carlos Alberto; Cuesta, Francisco; Buytaert, Wouter

    2013-01-01

    Observations and projections for mountain regions show a strong tendency towards upslope displacement of their biomes under future climate conditions. Because of their climatic and topographic heterogeneity, a more complex response is expected for biodiversity hotspots such as tropical mountain regions. This study analyzes potential changes in the distribution of biomes in the Tropical Andes and identifies target areas for conservation. Biome distribution models were developed using logistic regressions. These models were then coupled to an ensemble of 8 global climate models to project future distribution of the Andean biomes and their uncertainties. We analysed projected changes in extent and elevational range and identified regions most prone to change. Our results show a heterogeneous response to climate change. Although the wetter biomes exhibit an upslope displacement of both the upper and the lower boundaries as expected, most dry biomes tend to show downslope expansion. Despite important losses being projected for several biomes, projections suggest that between 74.8% and 83.1% of the current total Tropical Andes will remain stable, depending on the emission scenario and time horizon. Between 3.3% and 7.6% of the study area is projected to change, mostly towards an increase in vertical structure. For the remaining area (13.1%-17.4%), there is no agreement between model projections. These results challenge the common believe that climate change will lead to an upslope displacement of biome boundaries in mountain regions. Instead, our models project diverging responses, including downslope expansion and large areas projected to remain stable. Lastly, a significant part of the area expected to change is already affected by land use changes, which has important implications for management. This, and the inclusion of a comprehensive uncertainty analysis, will help to inform conservation strategies in the Tropical Andes, and to guide similar assessments for other

  13. Climate sensitivity of shrub growth across the tundra biome

    DEFF Research Database (Denmark)

    Myers-Smith, Isla H; Elmendorf, Sarah C; Beck, Pieter S.A.

    2015-01-01

    Rapid climate warming in the tundra biome has been linked to increasing shrub dominance1–4. Shrub expansion can modify climate by altering surface albedo, energy and water balance, and permafrost2,5–8, yet the drivers of shrub growth remain poorly understood. Dendroecological data consisting...... be incorporated into Earth system models to improve future projections of climate change impacts across the tundra biome....

  14. biojs-io-biom, a BioJS component for handling data in Biological Observation Matrix (BIOM) format.

    Science.gov (United States)

    Ankenbrand, Markus J; Terhoeven, Niklas; Hohlfeld, Sonja; Förster, Frank; Keller, Alexander

    2016-01-01

    The Biological Observation Matrix (BIOM) format is widely used to store data from high-throughput studies. It aims at increasing interoperability of bioinformatic tools that process this data. However, due to multiple versions and implementation details, working with this format can be tricky. Currently, libraries in Python, R and Perl are available, whilst such for JavaScript are lacking. Here, we present a BioJS component for parsing BIOM data in all format versions. It supports import, modification, and export via a unified interface. This module aims to facilitate the development of web applications that use BIOM data. Finally, we demonstrate its usefulness by two applications that already use this component. Availability: https://github.com/molbiodiv/biojs-io-biom, https://dx.doi.org/10.5281/zenodo.218277.

  15. Multiband radar characterization of forest biomes

    Science.gov (United States)

    Dobson, M. Craig; Ulaby, Fawwaz T.

    1990-01-01

    The utility of airborne and orbital SAR in classification, assessment, and monitoring of forest biomes is investigated through analysis of orbital synthetic aperature radar (SAR) and multifrequency and multipolarized airborne SAR imagery relying on image tone and texture. Preliminary airborne SAR experiments and truck-mounted scatterometer observations demonstrated that the three dimensional structural complexity of a forest, and the various scales of temporal dynamics in the microwave dielectric properties of both trees and the underlying substrate would severely limit empirical or semi-empirical approaches. As a consequence, it became necessary to develop a more profound understanding of the electromagnetic properties of a forest scene and their temporal dynamics through controlled experimentation coupled with theoretical development and verification. The concatenation of various models into a physically-based composite model treating the entire forest scene became the major objective of the study as this is the key to development of a series of robust retrieval algorithms for forest biophysical properties. In order to verify the performance of the component elements of the composite model, a series of controlled laboratory and field experiments were undertaken to: (1) develop techniques to measure the microwave dielectric properties of vegetation; (2) relate the microwave dielectric properties of vegetation to more readily measured characteristics such as density and moisture content; (3) calculate the radar cross-section of leaves, and cylinders; (4) improve backscatter models for rough surfaces; and (5) relate attenuation and phase delays during propagation through canopies to canopy properties. These modeling efforts, as validated by the measurements, were incorporated within a larger model known as the Michigan Microwave Canopy Scattering (MIMICS) Model.

  16. Production potentielle de bioéthanol, de biométhane et de pellets à partir des déchets de biomasse lignocellulosique du bananier (Musa spp. au Cameroun

    Directory of Open Access Journals (Sweden)

    Kamdem, I.

    2011-01-01

    Full Text Available Potential production of bioethanol, biomethane and wood pellets from lignocellulosic biomass wastes of the banana plant (Musa spp. in Cameroon. Like most African countries who are producers and exporters of banana, Cameroon is facing a major energy deficit. Yet, the country is generating annually about 4,500,000 tons of fresh banana plant lignocellulosic waste biomass matter equivalent to 402,750 tons of dry matter. The dry matter contained about 80,57% organic matter which are not exploited. Under the sustainable development, which is linked to environmental protection, the biotransformation of these residues can potentially produce about 93,800; 92,133; 447,500 tons of bioethanol, biomethane and pellets respectively. The waste transformation could reduce the energy deficit and create jobs opportunities. Productions of this renewable energy or biofuel also constitute a new area which could assure an important source of income for the banana cultivators and the entire country.

  17. Development of the BIOME-BGC model for the simulation of managed Moso bamboo forest ecosystems.

    Science.gov (United States)

    Mao, Fangjie; Li, Pingheng; Zhou, Guomo; Du, Huaqiang; Xu, Xiaojun; Shi, Yongjun; Mo, Lufeng; Zhou, Yufeng; Tu, Guoqing

    2016-05-01

    Numerical models are the most appropriate instrument for the analysis of the carbon balance of terrestrial ecosystems and their interactions with changing environmental conditions. The process-based model BIOME-BGC is widely used in simulation of carbon balance within vegetation, litter and soil of unmanaged ecosystems. For Moso bamboo forests, however, simulations with BIOME-BGC are inaccurate in terms of the growing season and the carbon allocation, due to the oversimplified representation of phenology. Our aim was to improve the applicability of BIOME-BGC for managed Moso bamboo forest ecosystem by implementing several new modules, including phenology, carbon allocation, and management. Instead of the simple phenology and carbon allocation representations in the original version, a periodic Moso bamboo phenology and carbon allocation module was implemented, which can handle the processes of Moso bamboo shooting and high growth during "on-year" and "off-year". Four management modules (digging bamboo shoots, selective cutting, obtruncation, fertilization) were integrated in order to quantify the functioning of managed ecosystems. The improved model was calibrated and validated using eddy covariance measurement data collected at a managed Moso bamboo forest site (Anji) during 2011-2013 years. As a result of these developments and calibrations, the performance of the model was substantially improved. Regarding the measured and modeled fluxes (gross primary production, total ecosystem respiration, net ecosystem exchange), relative errors were decreased by 42.23%, 103.02% and 18.67%, respectively. Copyright © 2015 Elsevier Ltd. All rights reserved.

  18. Intrinsic climate dependency of ecosystem light and water-use-efficiencies across Australian biomes

    International Nuclear Information System (INIS)

    Shi, Hao; Li, Longhui; Eamus, Derek; Cleverly, James; Huete, Alfredo; Yu, Qiang; Beringer, Jason; Van Gorsel, Eva; Hutley, Lindsay

    2014-01-01

    The sensitivity of ecosystem gross primary production (GPP) to availability of water and photosynthetically active radiation (PAR) differs among biomes. Here we investigated variations of ecosystem light-use-efficiency (eLUE: GPP/PAR) and water-use-efficiency (eWUE: GPP/evapotranspiration) among seven Australian eddy covariance sites with differing annual precipitation, species composition and temperature. Changes to both eLUE and eWUE were primarily correlated with atmospheric vapor pressure deficit (VPD) at multiple temporal scales across biomes, with minor additional correlations observed with soil moisture and temperature. The effects of leaf area index on eLUE and eWUE were also relatively weak compared to VPD, indicating an intrinsic dependency of eLUE and eWUE on climate. Additionally, eLUE and eWUE were statistically different for biomes between summer and winter, except eWUE for savannas and the grassland. These findings will improve our understanding of how light- and water-use traits in Australian ecosystems may respond to climate change. (letter)

  19. Tropical grassy biomes: linking ecology, human use and conservation.

    Science.gov (United States)

    Lehmann, Caroline E R; Parr, Catherine L

    2016-09-19

    Tropical grassy biomes (TGBs) are changing rapidly the world over through a coalescence of high rates of land-use change, global change and altered disturbance regimes that maintain the ecosystem structure and function of these biomes. Our theme issue brings together the latest research examining the characterization, complex ecology, drivers of change, and human use and ecosystem services of TGBs. Recent advances in ecology and evolution have facilitated a new perspective on these biomes. However, there continues to be controversies over their classification and state dynamics that demonstrate critical data and knowledge gaps in our quantitative understanding of these geographically dispersed regions. We highlight an urgent need to improve ecological understanding in order to effectively predict the sensitivity and resilience of TGBs under future scenarios of global change. With human reliance on TGBs increasing and their propensity for change, ecological and evolutionary understanding of these biomes is central to the dual goals of sustaining their ecological integrity and the diverse services these landscapes provide to millions of people.This article is part of the themed issue 'Tropical grassy biomes: linking ecology, human use and conservation'. © 2016 The Author(s).

  20. Conserving the Brazilian semiarid (Caatinga) biome under climate change

    DEFF Research Database (Denmark)

    Oliveira, Guilherme de; Bastos Araujo, Miguel; Rangel, Thiago Fernado

    2012-01-01

    to assess changes in climate suitability across individual species ranges, ensemble forecasting was used based on seven bioclimatic envelope models, three atmosphere–ocean general circulation models, and two greenhouse emission gas scenarios for 2020, 2050, and 2080. We found that most species will gain...... additional threats to the biome’s biodiversity. Here, we ask if the remnants of natural vegetation in Caatinga biome, where endemic terrestrial vertebrate species occur, are likely to retain more climatic suitability under climate change scenarios than other less pristine areas of the biome. In order......The Caatinga is a semiarid biome of the northeast of Brazil with only 1 % of its territory currently conserved. The biome’s biodiversity is highly threatened due to exposure to land conversion for agricultural and cattle ranch. Climate forecasts predict increases in aridity, which could pose...

  1. Tropical grassy biomes: misunderstood, neglected, and under threat.

    Science.gov (United States)

    Parr, Catherine L; Lehmann, Caroline E R; Bond, William J; Hoffmann, William A; Andersen, Alan N

    2014-04-01

    Tropical grassy biomes (TGBs) are globally extensive, provide critical ecosystem services, and influence the earth-atmosphere system. Yet, globally applied biome definitions ignore vegetation characteristics that are critical to their functioning and evolutionary history. Hence, TGB identification is inconsistent and misinterprets the ecological processes governing vegetation structure, with cascading negative consequences for biodiversity. Here, we discuss threats linked to the definition of TGB, the Clean Development Mechanism (CDM) and Reducing Emissions from Deforestation and Forest Degradation schemes (REDD+), and enhanced atmospheric CO2, which may facilitate future state shifts. TGB degradation is insidious and less visible than in forested biomes. With human reliance on TGBs and their propensity for woody change, ecology and evolutionary history are fundamental to not only the identification of TGBs, but also their management for future persistence. Copyright © 2014 Elsevier Ltd. All rights reserved.

  2. Has the Alaskan climate crossed a threshold? Satellite and tree-ring data indicate biome shift

    Science.gov (United States)

    Beck, P. S.; Juday, G. P.; Goetz, S. J.; Alix, C.; Barber, V. A.; Winslow, S. E.; Sousa, E. E.; Heiser, P.; Herriges, J. D.

    2010-12-01

    Changes in northern high latitude forest ecosystems, which contain at least 30% of global terrestrial carbon, could substantially modify future climate. Model simulations of high latitude ecosystems in the last two decades of the 20th century describe increasing photosynthetic capacity and vegetation productivity due to climate warming. Global vegetation models also predict that boreal forests are particularly sensitive to a biome shift during the 21st century. We linked satellite data describing gross productivity (Pg) and an extensive tree-ring data set describing growth in white and black spruce trees (N=856) in 88 stands to assess changes in forest productivity since 1982 across interior Alaska. Trends and variability in both records agree closely (r2=0.78, N=27) and reveal near-ubiquitous drought-induced productivity declines in undisturbed boreal forests except at the boreal-tundra ecotone. The areas experiencing declining productivity include mature forests considered to be substantial sinks of atmospheric carbon. The temperature increases of the last three decades have also amplified climate-related disturbance at high latitudes, resulting in intensified fire and pest regimes, as well as coupled feedbacks between each of these components. Our findings indicate that the biome shift projected to occur in the boreal zone during the 21st century is underway. They also suggest ecosystem models may be missing fundamental changes taking place in the circumpolar region.

  3. La prosodia como identificador biométrico

    OpenAIRE

    Farrús i Cabeceran, Mireia

    2011-01-01

    La biometría tiene como objetivo el reconocimiento de personas mediante uno o más identificadores biométricos como la voz, la cara o las huellas dactilares, entre otros. Gracias a la buena aceptación social y el poco intrusismo en los individuos, la voz ha sido, tradicionalmente, uno de los identificadores más utilizados en los sistemas biométricos. Estos sistemas de reconocimiento basados en la voz utilizan, habitualmente, características relacionadas con el espectro de la voz. No obstante, ...

  4. BOREAS RSS-08 BIOME-BGC Model Simulations at Tower Flux Sites in 1994

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: BIOME-BGC is a general ecosystem process model designed to simulate biogeochemical and hydrologic processes across multiple scales. BIOME-BGC is used to...

  5. BOREAS RSS-08 BIOME-BGC Model Simulations at Tower Flux Sites in 1994

    Data.gov (United States)

    National Aeronautics and Space Administration — BIOME-BGC is a general ecosystem process model designed to simulate biogeochemical and hydrologic processes across multiple scales. BIOME-BGC is used to estimate...

  6. Importance of soil-water to the Caatinga biome, Brazil

    NARCIS (Netherlands)

    Alves Rodrigues Pinheiro, Everton; Metselaar, Klaas; Jong van Lier, de Quirijn; Araújo, de José Carlos

    2016-01-01

    Northeastern Brazil is hydrologically characterized by recurrent droughts leading to a highly vulnerable natural water resource system. The region contains the Caatinga biome, covering an area of approximately 800000km2. To increase insight in water balance components for this sparsely

  7. South African Red Data Book: Plants - fynbos and Karoo biomes

    CSIR Research Space (South Africa)

    Hall, AV

    1985-01-01

    Full Text Available In this report a list is given of 1 808 rare, threatened and recently extinct plants in the fynbos and karoo biomes in the Cape Province of South Africa. The area covers the south-western and southern Cape, Namaqualand and the Karoo. Following...

  8. Climate control of terrestrial carbon exchange across biomes and continents

    Czech Academy of Sciences Publication Activity Database

    Yi, C.; Ricciuto, D.; Marek, Michal V.

    2010-01-01

    Roč. 5, č. 3 (2010), s. 034007 ISSN 1748-9326 Institutional research plan: CEZ:AV0Z60870520 Keywords : NEE * climate control * terrestrial carbon sequestration * temperature * dryness * eddy flux * biomes * photosynthesis * respiration * global carbon cycle Subject RIV: EH - Ecology, Behaviour Impact factor: 3.049, year: 2010

  9. Climate control of terrestrial carbon exchange across biomes and continents

    Science.gov (United States)

    Chuixiang Yi; Daniel Ricciuto; Runze Li; John Wolbeck; Xiyan Xu; Mats Nilsson; John Frank; William J. Massman

    2010-01-01

    Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO2 exchange with the atmosphere across biomes...

  10. Anthropogenic biomes: a key contribution to earth-system science

    Science.gov (United States)

    Lilian Alessa; F. Stuart Chapin

    2008-01-01

    Human activities now dominate most of the ice-free terrestrial surface. A recent article presents a classification and global map of human-influenced biomes of the world that provides a novel and potentially appropriate framework for projecting changes in earth-system dynamics.

  11. The study of landscape units in Pantanal biome

    Directory of Open Access Journals (Sweden)

    Maria Elisa Siqueira Silva

    2012-04-01

    Full Text Available The geoecological landscape observation allows the analysis of geosystems fragmentation in small areas or a diagnosis of a particular environment or biome. This geosystemic approach permits the integration of elements that constitutes the environment, allowing the interaction and interdependence analysis of social and ecological elements. The main goal of this work was to elaborate a map of landscape units and a territorial planning for Pantanal biome, using data generated by the Brazilian Institute of Geography and Statistics (IBGE corresponding to morphometric relief units, geology, soils and agricultural capability; the land cover and land use map developed by the Brazilian Agricultural Research Corporation (EMBRAPA and the maps of flooded areas and spatial variability of the Pantanal biome. From the crosstab between altitude, slope, spatial variability map and geology we identified 16 landscape units. Additionally, the analysis of Pantanal biome environmental vulnerability of the landscape units considering different types of vegetation, topography and soils units showed that Pantanal has an intermediate environmental fragility, located mainly in the alluvial deposition areas of the Taquari river and in flood plains with altitude between 50 and 250 meters.

  12. Remotely sensed phenology for mapping biomes and vegetation functional types

    CSIR Research Space (South Africa)

    Wessels, Konrad J

    2009-07-01

    Full Text Available This study used remotely-sensed phenology data derived from Advanced Very High Resolution Radiometer (AVHRR), in a fully supervised decision-tree classification based on the new biome map of South Africa. The objectives were: (i) to investigate...

  13. Karoo biome: a preliminary sythesis. Part 1 - physical environment

    CSIR Research Space (South Africa)

    Cowling, RM

    1986-01-01

    Full Text Available . It is a multi-authored publication covering a wide range of topics. This first volume summarizes what is currently known on the physical environment of the biome; namely geology, soils, climate, hydrology, geohydrology and soil erosion. Other aspects...

  14. Do arthropod assemblages fit the grassland and savanna biomes of South Africa?

    OpenAIRE

    Monique Botha; Stefan J. Siebert; Johnnie van den Berg

    2016-01-01

    The long-standing tradition of classifying South Africa's biogeographical area into biomes is commonly linked to vegetation structure and climate. Because arthropod communities are often governed by both these factors, it can be expected that arthropod communities would fit the biomes. To test this hypothesis, we considered how well arthropod species assemblages fit South Africa's grassy biomes. Arthropod assemblages were sampled from six localities across the grassland and savanna biomes by ...

  15. User's Guide to Biome Information from the United States International Biological Program (IBP). First Edition.

    Science.gov (United States)

    Hinckley, A. Dexter; Haug, Peter T.

    This publication is a guide to the biome research conducted under the International Biological Program. The guide lists biome researchers by interest and by biome as well as a central list. A site list, map, information sources section reporting abstracts, bibliographies, journals, books, evaluations, and data books are also included. Three…

  16. Constrained variability of modeled T:ET ratio across biomes

    Science.gov (United States)

    Fatichi, Simone; Pappas, Christoforos

    2017-07-01

    A large variability (35-90%) in the ratio of transpiration to total evapotranspiration (referred here as T:ET) across biomes or even at the global scale has been documented by a number of studies carried out with different methodologies. Previous empirical results also suggest that T:ET does not covary with mean precipitation and has a positive dependence on leaf area index (LAI). Here we use a mechanistic ecohydrological model, with a refined process-based description of evaporation from the soil surface, to investigate the variability of T:ET across biomes. Numerical results reveal a more constrained range and higher mean of T:ET (70 ± 9%, mean ± standard deviation) when compared to observation-based estimates. T:ET is confirmed to be independent from mean precipitation, while it is found to be correlated with LAI seasonally but uncorrelated across multiple sites. Larger LAI increases evaporation from interception but diminishes ground evaporation with the two effects largely compensating each other. These results offer mechanistic model-based evidence to the ongoing research about the patterns of T:ET and the factors influencing its magnitude across biomes.

  17. Mapping Foliar Traits Across Biomes Using Imaging Spectroscopy: A Synthesis

    Science.gov (United States)

    Townsend, P. A.; Singh, A.; Wang, Z.

    2016-12-01

    One of the great promises of imaging spectroscopy - also known as hyperspectral remote sensing - is the ability to map the spatial variation in foliar functional traits, such as nitrogen concentration, pigments, leaf structure, photosynthetic capacity and secondary biochemistry, that drive terrestrial ecosystem processes. A remote-sensing approach enables characterization of within- and between-biome variations that may be crucial to understanding ecosystem responses to pests, pathogens and environmental change. We provide a synthesis of the foliar traits that can be mapped from imaging spectroscopy, as well as an overview of both the major applications of trait maps derived from hyperspectral imagery and current gaps in our knowledge and capacity. Specifically, we make the case that a global imaging spectroscopy mission will provide unique and urgent measurements necessary to understand the response of agricultural and natural systems to rapid global changes. Finally, we present a quantitative framework to utilize imaging spectroscopy to characterize spatial and temporal variation in foliar traits within and between biomes. From this we can infer the dynamics of vegetation function across ecosystems, especially in transition zones and environmentally sensitive systems. Eventual launch of a global imaging spectroscopy mission will enable collection of narrowband VSWIR measurements that will help close major gaps in our understanding of biogeochemical cycles and improve representation of vegetated biomes in Earth system process models.

  18. Temporal profiles of vegetation indices for characterizing grazing intensity on natural grasslands in Pampa biome

    Directory of Open Access Journals (Sweden)

    Amanda Heemann Junges

    2016-08-01

    Full Text Available ABSTRACT The Pampa biome is an important ecosystem in Brazil that is highly relevant to livestock production. The objective of this study was to analyze the potential use of vegetation indices to discriminate grazing intensities on natural grasslands in the Pampa biome. Moderate Resolution Imaging Spectroradiometer (MODIS Normalized Difference Vegetation Index (NDVI and Enhanced Vegetation Index (EVI images from Jan to Dec, 2000 to 2013 series, were analyzed for natural grassland experimental units managed under high (forage allowance of 5 ± 2 % live weight – LW, moderate (13 ± 5 % LW and low grazing intensity (19 ± 7 % LW. Regardless of intensity, the temporal profiles showed lower NDVI and EVI during winter, increased values in spring because of summer species regrowth, slightly decreased values in summer, especially in years when there is a water deficit, and increased values in the fall associated with the beginning of winter forage development. The average temporal profiles of moderate grazing intensity exhibited greater vegetation index values compared with low and high grazing intensities. The temporal profiles of less vegetation index were associated with lower green biomass accumulation caused by the negative impact of stocking rates on the leaf area index under high grazing intensity and a floristic composition with a predominance of tussocks under low grazing intensity. Vegetation indices can be used for distinguishing moderate grazing intensity from low and high intensities. The average EVI values can discriminate moderate grazing intensity during any season, and the NDVI values can discriminate moderate grazing intensity during spring and winter.

  19. Tritium labeling for bio-med research

    International Nuclear Information System (INIS)

    Lemmon, R.M.

    1980-01-01

    A very large fraction of what we know about biochemical pathways in the living cell has resulted from the use of radioactively-labeled tracer compounds; the use of tritium-labeled compounds has been particularly important. As research in biochemistry and biology has progressed the need has arisen to label compounds of higher specific activity and of increasing molecular complexity - for example, oligo-nucleotides, polypeptides, hormones, enzymes. Our laboratory has gradually developed special facilities for handling tritium at the kilocurie level. These facilities have already proven extremely valuable in producing labeled compounds that are not available from commercial sources. The principal ways employed for compound labeling are: (1) microwave discharge labeling, (2) catalytic tritio-hydrogenation, (3) catalytic exchange with T 2 O, and (4) replacement of halogen atoms by T. Studies have also been carried out on tritiation by the replacement of halogen atoms with T atoms. These results indicate that carrier-free tritium-labeled products, including biomacromolecules, can be produced in this way

  20. Hacking medical devices a review - biomed 2013.

    Science.gov (United States)

    Frenger, Paul

    2013-01-01

    Programmable, implantable and external biomedical devices (such as pacemakers, defibrillators, insulin pumps, pain management pumps, vagus nerve stimulators and others) may be vulnerable to unauthorized access, commonly referred to as “hacking”. This intrusion may lead to compromise of confidential patient data or loss of control of the device itself, which may be deadly. Risks to health from unauthorized access is in addition to hazards from faulty (“buggy”) software or circuitry. Historically, this aspect of medical device design has been underemphasized by both manufacturers and regulatory bodies until recently. However, an insulin pump was employed as a murder weapon in 2001 and successful hacking of an implantable defibrillator was demonstrated in 2008. To remedy these problems, professional groups have announced a variety of design standards and the governmental agencies of several countries have enacted device regulations. In turn, manufacturers have developed new software products and hardware circuits to assist biomedical engineering firms to improve their commercial offerings. In this paper the author discusses these issues, reviewing known problems and zero-day threats, with potential solutions. He outlines his approach to secure software and hardware challenges using the Forth language. A plausible scenario is described in which hacking of an implantable defibrillator by terrorists results in a severe national security threat to the United States.

  1. FIFE data analysis: Testing BIOME-BGC predictions for grasslands

    Science.gov (United States)

    Hunt, E. Raymond, Jr.

    1994-01-01

    The First International Satellite Land Surface Climatology Project (ISLSCP) Field Experiment (FIFE) was conducted in a 15 km by 15 km research area located 8 km south of Manhattan, Kansas. The site consists primarily of native tallgrass prairie mixed with gallery oak forests and croplands. The objectives of FIFE are to better understand the role of biology in controlling the interactions between the land and the atmosphere, and to determine the value of remotely sensed data for estimating climatological parameters. The goals of FIFE are twofold: the upscale integration of models, and algorithm development for satellite remote sensing. The specific objectives of the field campaigns carried out in 1987 and 1989 were the simultaneous acquisition of satellite, atmospheric, and surface data; and the understanding of the processes controlling surface energy and mass exchange. Collected data were used to study the dynamics of various ecosystem processes (photosynthesis, evaporation and transpiration, autotrophic and heterotrophic respiration, etc.). Modelling terrestrial ecosystems at scales larger than that of a homogeneous plot led to the development of simple, generalized models of biogeochemical cycles that can be accurately applied to different biomes through the use of remotely sensed data. A model was developed called BIOME-BGC (for BioGeochemical Cycles) from a coniferous forest ecosystem model, FOREST-BGC, where a biome is considered a combination of a life forms in a specified climate. A predominately C4-photosynthetic grassland is probably the most different from a coniferous forest possible, hence the FIFE site was an excellent study area for testing BIOME-BGC. The transition from an essentially one-dimensional calculation to three-dimensional, landscape scale simulations requires the introduction of such factors as meteorology, climatology, and geomorphology. By using remotely sensed geographic information data for important model inputs, process

  2. Accelerating net terrestrial carbon uptake during the warming hiatus due to reduced respiration

    Science.gov (United States)

    Ashley Ballantyne; William Smith; William Anderegg; Pekka Kauppi; Jorge Sarmiento; Pieter Tans; Elena Shevliakova; Yude Pan; Benjamin Poulter; Alessandro Anav; Pierre Friedlingstein; Richard Houghton; Steven Running

    2017-01-01

    The recent 'warming hiatus' presents an excellent opportunity to investigate climate sensitivity of carbon cycle processes. Here we combine satellite and atmospheric observations to show that the rate of net biome productivity (NBP) has significantly accelerated from-0.007 ± 0.065 PgC yr-2 over the warming period (1982 to 1998) to 0.119...

  3. Seeking potential contributions to future carbon budget in conterminous US forests considering disturbances

    Science.gov (United States)

    Fangmin Zhang; Yude Pan; Richard A. Birdsey; Jing M. Chen; Alexa Dugan

    2017-01-01

    Currently, US forests constitute a large carbon sink, comprising about 9 % of the global terrestrial carbon sink. Wildfire is the most significant disturbance influencing carbon dynamics in US forests. Our objective is to estimate impacts of climate change, CO2 concentration, and nitrogen deposition on the future net biome productivity (NBP) of...

  4. Vegetation structure of the biomes in southwestern Africa And their precipitation patterns

    OpenAIRE

    OKITSU, Susumu

    2010-01-01

    Southwestern Africa contains diverse biomes. The amount of the annual precipitation of this area has been traditionally thought to be the most important controlling factor to the differentiation of the biomes. However, this territory experiences the summer rain type and winter rain type. Those two different precipitation patterns should result in the different mechanisms to control the distribution of the biomes. This study intends to clarify the relationships between the distribution of the ...

  5. The Fynbos and sUcculent Karoo biomes do not have exceptional local ant richness.

    Science.gov (United States)

    Braschler, Brigitte; Chown, Steven L; Gaston, Kevin J

    2012-01-01

    The Fynbos (FB) and Succulent Karoo biomes (SKB) have high regional plant diversity despite relatively low productivity. Local diversity in the region varies but is moderate. For insects, previous work suggests that strict phytophages, but not other taxa, may have high regional richness. However, what has yet to be investigated is whether the local insect species richness of FB and SKB is unusual for a region of this productivity level at this latitude, and whether regional richness is also high. Here we determine whether this is the case for ants. We use species richness data from pitfall traps in the FB and SKB in the Western Cape Province, South Africa and a global dataset of local ant richness extracted from the literature. We then relate the globally derived values of local richness to two energy-related predictors--productive energy (NDVI) and temperature, and to precipitation, and compare the data from the FB and SKB with these relationships. We further compare our local richness estimates with that of similar habitats worldwide, and regional ant richness with estimates derived from other regions. The local ant species richness of the FB and SKB falls within the general global pattern relating ant richness to energy, and is similar to that in comparable habitats elsewhere. At a regional scale, the richness of ants across all of our sites is not exceptional by comparison with other regional estimates from across the globe. Local richness of ants in the FB and SKB is not exceptional by global standards. Initial analyses suggest that regional diversity is also not exceptional for the group. It seems unlikely that the mechanisms which have contributed to the development of extraordinarily high regional plant diversity in these biomes have had a strong influence on the ants.

  6. Climate control of terrestrial carbon exchange across biomes and continents

    DEFF Research Database (Denmark)

    Yi, Chuixiang; Ricciuto, Daniel; Li, Runze

    2010-01-01

    Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate–carbon cycle feedbacks. However, directly observed relationships between...... climate and terrestrial CO2 exchange with the atmosphere across biomes and continents are lacking. Here we present data describing the relationships between net ecosystem exchange of carbon (NEE) and climate factors as measured using the eddy covariance method at 125 unique sites in various ecosystems...

  7. Evaluating fire danger in Brazilian biomes: present and future patterns

    Science.gov (United States)

    Silva, Patrícia; Bastos, Ana; DaCamara, Carlos; Libonati, Renata

    2017-04-01

    Climate change is expected to have a significant impact on fire occurrence and activity, particularly in Brazil, a region known to be fire-prone [1]. The Brazilian savanna, commonly referred to as cerrado, is a fire-adapted biome covering more than 20% of the country's total area. It presents the highest numbers of fire events, making it particularly susceptible to changes in climate. It is thus essential to understand the present fire regimes in Brazilian biomes, in order to better evaluate future patterns. The CPTEC/INPE, the Brazilian Center for Weather Forecasting and Climate Research at the Brazilian National Institute of Space Research developed a fire danger index based on the occurrence of hundreds of thousands of fire events in the main Brazilian biomes [2]: the Meteorological Fire Danger Index (MFDI). This index indicates the predisposition of vegetation to be burned on a given day, for given climate conditions preceding that day. It relies on daily values of air temperature, relative humidity, accumulated precipitation and vegetation cover. In this study we aim to access the capability of the MFDI to accurately replicate present fire conditions for different biomes, with a special focus on cerrado. To this end, we assess the link between the MFDI as calculated by three different reanalysis (ERA-Interim, NCEP/DOE Reanalysis 2 and MERRA-2) and the observed burned area. We further calculate the validated MFDI using a regional climate model, the RCA4 as forced by EC-Earth from CORDEX, to understand the ability of the model to characterize present fire danger. Finally, the need to calibrate the model to better characterize future fire danger was also evaluated. This work was developed within the framework of the Brazilian Fire-Land-Atmosphere System (BrFLAS) Project financed by the Portuguese and Brazilian science foundations, FCT and FAPESP (project references FAPESP/1389/2014 and 2014/20042-2). [1] KRAWCHUK, M.A.; MORITZ, M.A.; PARISIEN, M.A.; VAN DORN, J

  8. The predator-prey power law: Biomass scaling across terrestrial and aquatic biomes.

    Science.gov (United States)

    Hatton, Ian A; McCann, Kevin S; Fryxell, John M; Davies, T Jonathan; Smerlak, Matteo; Sinclair, Anthony R E; Loreau, Michel

    2015-09-04

    Ecosystems exhibit surprising regularities in structure and function across terrestrial and aquatic biomes worldwide. We assembled a global data set for 2260 communities of large mammals, invertebrates, plants, and plankton. We find that predator and prey biomass follow a general scaling law with exponents consistently near ¾. This pervasive pattern implies that the structure of the biomass pyramid becomes increasingly bottom-heavy at higher biomass. Similar exponents are obtained for community production-biomass relations, suggesting conserved links between ecosystem structure and function. These exponents are similar to many body mass allometries, and yet ecosystem scaling emerges independently from individual-level scaling, which is not fully understood. These patterns suggest a greater degree of ecosystem-level organization than previously recognized and a more predictive approach to ecological theory. Copyright © 2015, American Association for the Advancement of Science.

  9. Multiple nutrient stresses at intersecting Pacific Ocean biomes detected by protein biomarkers.

    Science.gov (United States)

    Saito, Mak A; McIlvin, Matthew R; Moran, Dawn M; Goepfert, Tyler J; DiTullio, Giacomo R; Post, Anton F; Lamborg, Carl H

    2014-09-05

    Marine primary productivity is strongly influenced by the scarcity of required nutrients, yet our understanding of these nutrient limitations is informed by experimental observations with sparse geographical coverage and methodological limitations. We developed a quantitative proteomic method to directly assess nutrient stress in high-light ecotypes of the abundant cyanobacterium Prochlorococcus across a meridional transect in the central Pacific Ocean. Multiple peptide biomarkers detected widespread and overlapping regions of nutritional stress for nitrogen and phosphorus in the North Pacific Subtropical Gyre and iron in the equatorial Pacific. Quantitative protein analyses demonstrated simultaneous stress for these nutrients at biome interfaces. This application of proteomic biomarkers to diagnose ocean metabolism demonstrated Prochlorococcus actively and simultaneously deploying multiple biochemical strategies for low-nutrient conditions in the oceans. Copyright © 2014, American Association for the Advancement of Science.

  10. Ticks parasitizing bats (Mammalia: Chiroptera in the Caatinga Biome, Brazil

    Directory of Open Access Journals (Sweden)

    Hermes Ribeiro Luz

    Full Text Available Abstract In this paper, the authors report ticks parasitizing bats from the Serra das Almas Natural Reserve (RPPN located in the municipality of Crateús, state of Ceará, in the semiarid Caatinga biome of northeastern Brazil. The study was carried out during nine nights in the dry season (July 2012 and 10 nights in the rainy season (February 2013. Only bats of the Phyllostomidae and Mormoopidae families were parasitized by ticks. The species Artibeus planirostris and Carolia perspicillata were the most parasitized. A total of 409 larvae were collected and classified into three genera: Antricola (n = 1, Nothoaspis (n = 1 and Ornithodoros (n = 407. Four species were morphologically identified as Nothoaspis amazoniensis, Ornithodoros cavernicolous, Ornithodoros fonsecai, Ornithodoros hasei, and Ornithodoros marinkellei. Ornithodoros hasei was the most common tick associated with bats in the current study. The present study expand the distributional ranges of at least three soft ticks into the Caatinga biome, and highlight an unexpected richness of argasid ticks inhabiting this arid ecosystem.

  11. Ticks parasitizing bats (Mammalia: Chiroptera) in the Caatinga Biome, Brazil.

    Science.gov (United States)

    Luz, Hermes Ribeiro; Muñoz-Leal, Sebastián; Almeida, Juliana Cardoso de; Faccini, João Luiz Horacio; Labruna, Marcelo Bahia

    2016-01-01

    In this paper, the authors report ticks parasitizing bats from the Serra das Almas Natural Reserve (RPPN) located in the municipality of Crateús, state of Ceará, in the semiarid Caatinga biome of northeastern Brazil. The study was carried out during nine nights in the dry season (July 2012) and 10 nights in the rainy season (February 2013). Only bats of the Phyllostomidae and Mormoopidae families were parasitized by ticks. The species Artibeus planirostris and Carolia perspicillata were the most parasitized. A total of 409 larvae were collected and classified into three genera: Antricola (n = 1), Nothoaspis (n = 1) and Ornithodoros (n = 407). Four species were morphologically identified as Nothoaspis amazoniensis, Ornithodoros cavernicolous, Ornithodoros fonsecai, Ornithodoros hasei, and Ornithodoros marinkellei. Ornithodoros hasei was the most common tick associated with bats in the current study. The present study expand the distributional ranges of at least three soft ticks into the Caatinga biome, and highlight an unexpected richness of argasid ticks inhabiting this arid ecosystem.

  12. biojs-io-biom, a BioJS component for handling data in Biological Observation Matrix (BIOM format [version 2; referees: 1 approved, 2 approved with reservations

    Directory of Open Access Journals (Sweden)

    Markus J. Ankenbrand

    2017-01-01

    Full Text Available The Biological Observation Matrix (BIOM format is widely used to store data from high-throughput studies. It aims at increasing interoperability of bioinformatic tools that process this data. However, due to multiple versions and implementation details, working with this format can be tricky. Currently, libraries in Python, R and Perl are available, whilst such for JavaScript are lacking. Here, we present a BioJS component for parsing BIOM data in all format versions. It supports import, modification, and export via a unified interface. This module aims to facilitate the development of web applications that use BIOM data. Finally, we demonstrate its usefulness by two applications that already use this component. Availability: https://github.com/molbiodiv/biojs-io-biom, https://dx.doi.org/10.5281/zenodo.218277

  13. Where do the treeless tundra areas of northern highlands fit in the global biome system: toward an ecologically natural subdivision of the tundra biome

    OpenAIRE

    Virtanen, Risto; Oksanen, Lauri Kalervo; Oksanen, Tarja Maarit; Cohen, Juval; Forbes, Bruce C.; Johansen, Bernt; Käyhkö, Jukka; Olofsson, Johan; Pulliainen, Jouni; Tømmervik, Hans

    2015-01-01

    This is the published version of the article. Published source: http://doi.org/10.1002/ece3.1837. According to some treatises, arctic and alpine sub-biomes are ecologically similar, whereas others find them highly dissimilar. Most peculiarly, large areas of northern tundra highlands fall outside of the two recent subdivisions of the tundra biome. We seek an ecologically natural resolution to this long-standing and far-reaching problem. We studied broad-scale patterns in climate...

  14. S2Biom database with logistical components of the biomass value chain

    NARCIS (Netherlands)

    Annevelink, E.; Groot, de H.L.E.; Shah, N.; Giarola, S.; Pantaleo, M.; Anttila, P.; Vis, Martijn; Raa, te Rik; Berg, van den Douwe; Gabrielle, B.

    2015-01-01

    The S2Biom project (www.s2biom.eu) - Delivery of sustainable supply of non-food biomass to support
    a resource-efficient Bioeconomy in Europe - supports sustainable delivery chains of non-food biomass feedstock.
    This poses a logistical challenge because the quality and handling

  15. Pollen-based biome reconstruction for southern Europe and Africa 18,000 yr BP

    NARCIS (Netherlands)

    Elenga, H; Peyron, O; Bonnefille, R; Jolly, D; Cheddadi, R; Guiot, J; Andrieu, [No Value; Bottema, S; Buchet, G; de Beaulieu, JL; Hamilton, AC; Maley, J; Marchant, R; Perez-Obiol, R; Reille, M; Riollet, G; Scott, L; Straka, H; Taylor, D; Van Campo, E; Vincens, A; Laarif, F; Jonson, H

    Pollen data from 18,000 C-14 yr sp were compiled in order to reconstruct biome distributions at the last glacial maximum in southern Europe and Africa. Biome reconstructions were made using the objective biomization method applied to pollen counts using a complete list of dryland taxa wherever

  16. Mid- to Late-Holocene pollen-based biome reconstructions for Colombia

    NARCIS (Netherlands)

    Marchant, R.; Behling, H.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Geel, van B.; Hammen, van der T.; Reenen, van T.; Wille, M.

    2001-01-01

    The assignment of Colombian pollen data to biomes allows the data to be synthesised at 10 `time windows' from the present-day to 6000 radiocarbon years before present (BP). The modern reconstructed biomes are compared to a map of modern potential vegetation to check the applicability of the method

  17. Flammable biomes dominated by eucalypts originated at the Cretaceous-Palaeogene boundary.

    Science.gov (United States)

    Crisp, Michael D; Burrows, Geoffrey E; Cook, Lyn G; Thornhill, Andrew H; Bowman, David M J S

    2011-02-15

    Fire is a major modifier of communities, but the evolutionary origins of its prevalent role in shaping current biomes are uncertain. Australia is among the most fire-prone continents, with most of the landmass occupied by the fire-dependent sclerophyll and savanna biomes. In contrast to biomes with similar climates in other continents, Australia has a tree flora dominated by a single genus, Eucalyptus, and related Myrtaceae. A unique mechanism in Myrtaceae for enduring and recovering from fire damage likely resulted in this dominance. Here, we find a conserved phylogenetic relationship between post-fire resprouting (epicormic) anatomy and biome evolution, dating from 60 to 62 Ma, in the earliest Palaeogene. Thus, fire-dependent communities likely existed 50 million years earlier than previously thought. We predict that epicormic resprouting could make eucalypt forests and woodlands an excellent long-term carbon bank for reducing atmospheric CO(2) compared with biomes with similar fire regimes in other continents.

  18. Climate and litter quality differently modulate the effects of soil fauna on litter decomposition across biomes.

    Science.gov (United States)

    García-Palacios, Pablo; Maestre, Fernando T; Kattge, Jens; Wall, Diana H

    2013-08-01

    Climate and litter quality have been identified as major drivers of litter decomposition at large spatial scales. However, the role played by soil fauna remains largely unknown, despite its importance for litter fragmentation and microbial activity. We synthesised litterbag studies to quantify the effect sizes of soil fauna on litter decomposition rates at the global and biome scales, and to assess how climate, litter quality and soil fauna interact to determine such rates. Soil fauna consistently enhanced litter decomposition at both global and biome scales (average increment ~ 37%). [corrected]. However, climate and litter quality differently modulated the effects of soil fauna on decomposition rates between biomes, from climate-driven biomes to those where climate effects were mediated by changes in litter quality. Our results advocate for the inclusion of biome-specific soil fauna effects on litter decomposition as a mean to reduce the unexplained variation in large-scale decomposition models. © 2013 John Wiley & Sons Ltd/CNRS.

  19. Identification of biomes affected by marginal expansion of agricultural land use induced by increased crop consumption

    DEFF Research Database (Denmark)

    Kløverpris, Jesper Hedal

    2009-01-01

    or potential grassland/steppe, whereas expansion on land suited for grazing but not for crop cultivation (grazable land) typically occurs on potential shrubland or a few other biomes depending on the region. Some uncertainty applies to the results but it is concluded that it is feasible to identify biomes...... to characterise these areas. The present study ascribes so-called biomes (natural potential vegetation) to the areas affected by agricultural expansion in order to provide a basis for assessing the environmental impacts from land use in the life cycle impact assessment (LCIA). The methodology builds...... on agricultural statistics and maps of global agricultural areas and the global distribution of biomes. The application of the method is illustrated with four examples. The results indicate that agricultural expansion on land suited for crop cultivation (cultivable land) typically affects forest biomes...

  20. Las publicaciones de investigación biomédica en la Revista de Biología Tropical

    Directory of Open Access Journals (Sweden)

    José María Gutiérrez

    2002-12-01

    Full Text Available En este trabajo se presenta un análisis temático de los trabajos de ciencias biomédicas publicados en la Revista de Biología Tropical durante sus 50 años de existencia. Las ciencias biomédicas, principalmente la Parasitología y la Microbiología, fueron el tema predominante en la Revista durante su primera década de existencia, como reflejo del dinámico y productivo ambiente de investigación existente alrededor de la Facultad de Microbiología de la Universidad de Costa Rica y del Hospital San Juan de Dios. El peso relativo de temas de investigación biomédica disminuyó paulatinamente en las décadas subsiguientes, aunque el número absoluto de contribuciones biomédicas se ha mantenido constante, con una media de cerca de 80 trabajos por década. La Parasitología ha sido el tema predominante en las publicaciones de tipo biomédico en la Revista; sin embargo, en las últimas décadas han aparecido publicaciones en una serie de temas como Farmacología de productos naturales, Toxinología, especialmente relacionada con venenos de serpientes y Genética Humana, lo cual ha ampliado el espectro temático de las ciencias biomédicas en los índices de la Revista. Este análisis retrospectivo evidencia claramente que las ciencias biomédicas, particularmente las relacionadas con Medicina Tropical, jugaron un papel fundamental en los primeros años de existencia de la Revista de Biología Tropical y han mantenido una presencia relevante durante las últimas décadas en esta publicación, sin duda la más importante y sólida de la región centroamericana en ciencias naturales.The contributions published in Revista de Biología Tropical in the area of Biomedical Sciences are reviewed in terms of number of contributions and scope of research subjects. Biomedical Sciences, particularly Parasitology and Microbiology, constituted the predominant subject in the Revista during the first decade, reflecting the intense research environment at the

  1. Softball Games Bring NCI and Leidos Biomed Employees Together | Poster

    Science.gov (United States)

    NCI and Leidos Biomed employees took to the fields at Nallin Pond for the third annual slow-pitch softball games on August 26. The series attracted 54 employees who were divided into four teams, Red, Blue, Gray, and White, and they were cheered on by about 40 enthusiastic spectators. In the first set of games, the Gray team defeated the Blue team, 15–8, and the White team pulled out a win against the Red team, 17–15. After a brief rest, the two winning teams and the two losing teams faced each other in a second set of games. On Field 1, the “winners” match-up of the Gray and White teams was a nail biter, with a close score throughout the game. Daylight was a factor, however, and the team captains decided to call the game for safety reasons. With a lead of 15 to 13, the Gray team was declared the overall winner.

  2. Biogeography of photoautotrophs in the high polar biome

    Directory of Open Access Journals (Sweden)

    Stephen Brian Pointing

    2015-09-01

    Full Text Available The global latitudinal gradient in biodiversity weakens in the high polar biome and so an alternative explanation for distribution of Arctic and Antarctic photoautotrophs is required. Here we identify how temporal, microclimate and evolutionary drivers of biogeography are important, rather than the macroclimate features that drive plant diversity patterns elsewhere. High polar ecosystems are biologically unique, with a more central role for bryophytes, lichens and microbial photoautotrophs over that of vascular plants. Constraints on vascular plants arise mainly due to stature and ontogenetic barriers. Conversely non-vascular plant and microbial photoautotroph distribution is correlated with favourable microclimates and the capacity for poikilohydric dormancy. Contemporary distribution also depends on evolutionary history, with adaptive and dispersal traits as well as legacy influencing biogeography. We highlight the relevance of these findings to predicting future impacts on polar plant diversity and to the current status of plants in Arctic and Antarctic conservation policy frameworks.

  3. Varying influence of environmental gradients on vegetation patterns across biomes

    Science.gov (United States)

    Dahlin, K.; Asner, G. P.; Mascaro, J.; Taylor, P.

    2016-12-01

    Environmental gradients, like elevation, slope, aspect, and soil properties, filter vegetation types at the local scale. These `environmental filters' create conditions that are conducive to the success or failure of different plant types, influencing landscape-scale heterogeneity in taxonomic diversity, functional diversity, biomass accumulation, greenness, and more. Niche-based models implicitly assume that environmental filtering is the dominant process controlling plant distributions. While environmental filtering is a well understood process, its importance relative to other drivers of heterogeneity, like disturbance, human impacts, and plant-animal interactions, remains unknown and likely varies between biomes. Here we synthesize results from several studies using data from the Carnegie Airborne Observatory - a fused LiDAR and imaging spectroscopy system - that mapped a vegetation patterns in multiple biomes and associated these with environmental gradients. The study sites range from Panama to California, and the patterns range from aboveground carbon to foliar chemistry. We show that at fine spatial scales environmental filtering is a strong predictor of aboveground biomass in a dry system (Jasper Ridge Biological Preserve, California - Dahlin et al 2012) but a weak predictor of plant functional traits in that same system (Dahlin et al 2014), a weak predictor of aboveground carbon in the tropics (Barro Colorado Island, Panama - Mascaro et al 2011; Osa Peninsula, Costa Rica - Taylor et al 2015), and a weak predictor of greenness (NDVI) in a disturbed dry system (Santa Cruz Island, California - Dahlin et al 2014). Collectively, these results suggest that while environmental filtering is an important driver of landscape-scale heterogeneity, it is not the only, or often even the most important, driver for many of these systems and patterns.

  4. Distribution Patterns of Burned Areas in the Brazilian Biomes: An Analysis Based on Satellite Data for the 2002–2010 Period

    Directory of Open Access Journals (Sweden)

    Fernando Moreira de Araújo

    2012-06-01

    Full Text Available Fires modify the structure of vegetation communities, the carbon and water cycles, the soil’s chemistry, and affect the climate system. Within this context, this work aimed to understand the distribution patterns of burned areas in Brazil, during the period of 2002 to 2010, taking into consideration each one of the six Brazilian biomes (Amazon, Caatinga, Cerrado, Atlantic Forest, Pampa and Pantanal and the respective major land cover classes. Data from the MODIS MCD45A1 product (burned area, as well as thermal anomalies (MOD14 and MYD14 and precipitation (TRMM, were analyzed according to the 2002 Brazilian official land cover and land use map (PROBIO. The Brazilian savanna biome, known as Cerrado, presented the largest concentration of burned areas detected by MODIS (73%, followed by the Amazon (14%, Pantanal (6%, Atlantic Forest (4%, Caatinga (3%, and Pampa (0,06% biomes. Indeed, in the years of 2007 and 2010, 90% and 92% of Brazil’s burned areas were concentrated in the Cerrado and Amazon biomes, respectively. TRMM data indicated that during these two years there was a significant influence of La Niña, causing low rainfall in the Amazon, Cerrado, Caatinga, and Atlantic Forest biomes. Regarding the land cover classes, approximately 81% of the burned areas occurred over remnant vegetation areas. Although no unequivocal correlation can be established between burned areas and new land conversions, the conspicuous concentration of fire scars, particularly in Amazon–Cerrado transition (i.e., the Arc of Deforestation is certainly not a simple coincidence. Such patterns and trends corroborate the need of improved territorial governance, in addition to the implementation of systematic fire warning and preventive systems.

  5. A mechanistic-bioclimatic modeling analysis of the potential impact of climate change on biomes of the Tibetan Plateau.

    Science.gov (United States)

    Ye, Jian-Sheng; Reynolds, James F; Li, Feng-Min

    2014-08-01

    The Tibetan Plateau (TP) is experiencing high rates of climatic change. We present a novel combined mechanistic-bioclimatic modeling approach to determine how changes in precipitation and temperature on the TP may impact net primary production (NPP) in four major biomes (forest, shrub, grass, desert) and if there exists a maximum rain use efficiency (RUE(MAX)) that represents Huxman et al.'s "boundary that constrain[s] site-level productivity and efficiency." We used a daily mechanistic ecosystem model to generate 40-yr outputs using observed climatic data for scenarios of decreased precipitation (25-100%); increased air temperature (1 degrees - 6 degrees C); simultaneous changes in both precipitation (+/- 50%, +/- 25%) and air temperature (+1 to +6 degrees C) and increased interannual variability (IAV) of precipitation (+1 sigma to +3 sigma, with fixed means, where sigma is SD). We fitted model output from these scenarios to Huxman et al.'s RUE(MAX) bioclimatic model, NPP = alpha + RUE x PPT (where alpha is the intercept, RUE is rain use efficiency, and PPT is annual precipitation). Based on these analyses, we conclude that there is strong support (when not explicit, then trend-wise) for Huxman et al.'s assertion that biomes converge to a common RUE(MAX) during the driest years at a site, thus representing the boundary for highest rain use efficiency; the interactive effects of simultaneously decreasing precipitation and increasing temperature on NPP for the TP is smaller than might be expected from additive, single-factor changes in these drivers; and that increasing IAV of precipitation may ultimately have a larger impact on biomes of the Tibetan Plateau than changing amounts of rainfall and air temperature alone.

  6. Toward Understanding Dynamics in Shifting Biomes: An Individual Based Modeling Approach to Characterizing Drought and Mortality in Central Western Canada

    Science.gov (United States)

    Armstrong, A. H.; Foster, A.; Rogers, B. M.; Hogg, T.; Michaelian, M.; Shuman, J. K.; Shugart, H. H., Jr.; Goetz, S. J.

    2017-12-01

    The Arctic-Boreal zone is known be warming at an accelerated rate relative to other biomes. Persistent warming has already affected the high northern latitudes, altering vegetation productivity, carbon sequestration, and many other ecosystem processes and services. The central-western Canadian boreal forests and aspen parkland are experiencing a decade long drought, and rainfall has been identified as a key factor controlling the location of the boundary between forest and prairie in this region. Shifting biome with related greening and browning trends are readily measureable with remote sensing, but the dynamics that create and result from them are not well understood. In this study, we use the University of Virginia Forest Model Enhanced (UVAFME), an individual-based forest model, to simulate the changes that are occurring across the southern boreal and parkland forests of west-central Canada. We present a parameterization of UVAFME for western central Canadian forests, validated with CIPHA data (Climate Change Impacts on the Productivity and Health of Aspen), and improved mortality. In order to gain a fine-scale understanding of how climate change and specifically drought will continue to affect the forests of this region, we simulated forest conditions following CMIP5 climate scenarios. UVAFME predictions were compared with statistical models and satellite observations of productivity across the landscape. Changes in forest cover, forest type, aboveground biomass, and mortality and recruitment dynamics are presented, highlighting the high vulnerability of this region to vegetation transitions associated with future droughts.

  7. Model prediction of biome-specific global soil respiration from 1960 to 2012

    Science.gov (United States)

    Zhao, Zhengyong; Peng, Changhui; Yang, Qi; Meng, Fan-Rui; Song, Xinzhang; Chen, Shutao; Epule, Terence Epule; Li, Peng; Zhu, Qiuan

    2017-07-01

    Biome-specific soil respiration (Rs) has important yet different roles in both the carbon cycle and climate change from regional to global scales. To date, no comparable studies related to global biome-specific Rs have been conducted applying comprehensive global Rs databases. The goal of this study was to develop artificial neural network (ANN) models capable of spatially estimating global Rs and to evaluate the effects of interannual climate variations on 10 major biomes. We used 1976 annual Rs field records extracted from global Rs literature to train and test the ANN models. We determined that the best ANN model for predicting biome-specific global annual Rs was the one that applied mean annual temperature (MAT), mean annual precipitation (MAP), and biome type as inputs (r2 = 0.60). The ANN models reported an average global Rs of 93.3 ± 6.1 Pg C yr-1 from 1960 to 2012 and an increasing trend in average global annual Rs of 0.04 Pg C yr-1. Estimated annual Rs increased with increases in MAT and MAP in cropland, boreal forest, grassland, shrubland, and wetland biomes. Additionally, estimated annual Rs decreased with increases in MAT and increased with increases in MAP in desert and tundra biomes, and only significantly decreased with increases in MAT (r2 = 0.87) in the savannah biome. The developed biome-specific global Rs database for global land and soil carbon models will aid in understanding the mechanisms underlying variations in soil carbon dynamics and in quantifying uncertainty in the global soil carbon cycle.

  8. Applying plant functional types to construct biome maps from eastern North American pollen data: comparisons with model results

    Science.gov (United States)

    Williams, John W.; Summers, Robert L.; Webb, Thompson, III

    Global biome models like BIOME1 convert climate-model simulations of past climates into biome distributions and thus facilitate comparison of both climate and biome model results with biomes estimate from paleoecological data. We adapted a biomization method, recently developed for European pollen data, for use with pollen data in eastern North America and then compared its estimated biomes with those derived from applying BIOME1 to the climate simulations from the NCAR CCM1 (National Center for Atmospheric Research Community Climate Model, Version 1) for 6000 years ago (6 ka). We first tested the biomization method by seeing how well the biomes inferred from modern pollen data match observed biomes. We found that modifications to the method were necessary in part to account for physiological differences between North American and European taxa, and in part to cope with our choice of using just 23 major pollen taxa. Our modifications significantly improved the match between observed modern biomes and pollen-derived biomes, as measured by the kappa statistic. We tested our tuning of the biomization method by matching its inferred 6 ka biomes to biomes estimated from pollen data using the modern analog technique. The degree of agreement at 6 ka is close to that for today, showing that (1) the biomization method and modern analog technique, when applied to the same pollen data, produce consistent results, and (2) the modifications made to the biomization method are robust back to 6 ka. We then used the results of the biomization method to test the biome maps simulated by BIOME1, which derives biome distributions from observed climate values for today and from the climatic simulations of the CCM1 for 6 ka. Only a fair agreement is seen, and significant offsets exist in the placement of biomes by BIOME1. For today BIOME1 simulates the boundary between the temperate deciduous and cool mixed forests to be too far south and the steppe-forest boundary to be too far west

  9. Procesamiento de señales biomédicas mediante instrumento virtual desarrollado con matlab

    OpenAIRE

    Sánchez Márquez, Carlos

    2014-01-01

    El presente trabajo es una alternativa para el estudio y desarrollo de prototipos biomédicos y de instrumentación, mediante el uso de la plataforma de Matlab para el procesamiento de señales biomédicas reales. Las señales biomédicas son continuas en el tiempo y son de pequeña amplitud, del orden de los mV, que presentan ruido corporal, ruido del equipo, ruido del ambiente, sin dejar de contar con el ruido acoplado de la red de 60 Hz. En ese sentido, la adquisición de datos se puede hacer medi...

  10. La filatelia biomédica Biomedicine philately

    Directory of Open Access Journals (Sweden)

    Emilio J.A. Roldán

    2011-02-01

    Full Text Available La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ayuda de las víctimas del terremoto de San Juan. Florentino Ameghino es el primer científico incluido en 1954, y en 1967 se edita un sello conmemorativo de la Dra. Cecilia Grierson. La filatelia argentina luego reconoce varios de nuestros científicos y médicos, congresos, universidades, campañas sanitarias, temas de odontología, farmacia, enfermería y otros, generando un amplio material filatélico en reconocimiento del valor social que la ciencia biomédica argentina ha logrado en el contexto propio e internacional. Posiblemente sea un científico, el Dr. Bernardo Houssay, uno de los argentinos más veces editado en distintos sellos postales de la filatelia mundial.Biomedicine is a vast field in philately or stamp collecting. It opens the topic the image of the goddess Hygeia, issued in a stamp from Nevis Island dated 1861. The first physicians to appear printed in stamps, in 1869, were three American constitutionalists, but only in 1937 there appear Dutch physicians as an acknowledgement of their contribution to public health. In Argentina the first stamp officially related to the topic was issued in 1944, to raise funds for the victims of the San Juan earthquake. Florentino Ameghino was the first scientist included in 1954, and in 1967 a stamp was issued in honour of Dr. Cecilia Grierson. Afterwards, Argentinean philately has recognized several of our scientists and physicians, congresses, universities, health campaigns, dentistry topics

  11. Evolution of Philodendron (Araceae species in Neotropical biomes

    Directory of Open Access Journals (Sweden)

    Leticia Loss-Oliveira

    2016-03-01

    Full Text Available Philodendron is the second most diverse genus of the Araceae, a tropical monocot family with significant morphological diversity along its wide geographic distribution in the Neotropics. Although evolutionary studies of Philodendron were conducted in recent years, the phylogenetic relationship among its species remains unclear. Additionally, analyses conducted to date suggested the inclusion of all American representatives of a closely-related genus, Homalomena, within the Philodendron clade. A thorough evaluation of the phylogeny and timescale of these lineages is thus necessary to elucidate the tempo and mode of evolution of this large Neotropical genus and to unveil the biogeographic history of Philodendron evolution along the Amazonian and Atlantic rainforests as well as open dry forests of South America. To this end, we have estimated the molecular phylogeny for 68 Philodendron species, which consists of the largest sampling assembled to date aiming the study of the evolutionary affinities. We have also performed ancestral reconstruction of species distribution along biomes. Finally, we contrasted these results with the inferred timescale of Philodendron and Homalomena lineage diversification. Our estimates indicate that American Homalomena is the sister clade to Philodendron. The early diversification of Philodendron took place in the Amazon forest from Early to Middle Miocene, followed by colonization of the Atlantic forest and the savanna-like landscapes, respectively. Based on the age of the last common ancestor of Philodendron, the species of this genus diversified by rapid radiations, leading to its wide extant distribution in the Neotropical region.

  12. Evolution of Philodendron (Araceae) species in Neotropical biomes.

    Science.gov (United States)

    Loss-Oliveira, Leticia; Sakuragui, Cassia; Soares, Maria de Lourdes; Schrago, Carlos G

    2016-01-01

    Philodendron is the second most diverse genus of the Araceae, a tropical monocot family with significant morphological diversity along its wide geographic distribution in the Neotropics. Although evolutionary studies of Philodendron were conducted in recent years, the phylogenetic relationship among its species remains unclear. Additionally, analyses conducted to date suggested the inclusion of all American representatives of a closely-related genus, Homalomena, within the Philodendron clade. A thorough evaluation of the phylogeny and timescale of these lineages is thus necessary to elucidate the tempo and mode of evolution of this large Neotropical genus and to unveil the biogeographic history of Philodendron evolution along the Amazonian and Atlantic rainforests as well as open dry forests of South America. To this end, we have estimated the molecular phylogeny for 68 Philodendron species, which consists of the largest sampling assembled to date aiming the study of the evolutionary affinities. We have also performed ancestral reconstruction of species distribution along biomes. Finally, we contrasted these results with the inferred timescale of Philodendron and Homalomena lineage diversification. Our estimates indicate that American Homalomena is the sister clade to Philodendron. The early diversification of Philodendron took place in the Amazon forest from Early to Middle Miocene, followed by colonization of the Atlantic forest and the savanna-like landscapes, respectively. Based on the age of the last common ancestor of Philodendron, the species of this genus diversified by rapid radiations, leading to its wide extant distribution in the Neotropical region.

  13. Climate control of terrestrial carbon exchange across biomes and continents

    International Nuclear Information System (INIS)

    Yi Chuixiang; Wolbeck, John; Xu Xiyan; Ricciuto, Daniel; Li Runze; Nilsson, Mats; Aires, Luis; Albertson, John D; Ammann, Christof; Arain, M Altaf; De Araujo, Alessandro C; Aubinet, Marc; Aurela, Mika; Barcza, Zoltan; Barr, Alan; Berbigier, Paul; Beringer, Jason; Bernhofer, Christian

    2010-01-01

    Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO 2 exchange with the atmosphere across biomes and continents are lacking. Here we present data describing the relationships between net ecosystem exchange of carbon (NEE) and climate factors as measured using the eddy covariance method at 125 unique sites in various ecosystems over six continents with a total of 559 site-years. We find that NEE observed at eddy covariance sites is (1) a strong function of mean annual temperature at mid- and high-latitudes, (2) a strong function of dryness at mid- and low-latitudes, and (3) a function of both temperature and dryness around the mid-latitudinal belt (45 deg. N). The sensitivity of NEE to mean annual temperature breaks down at ∼ 16 deg. C (a threshold value of mean annual temperature), above which no further increase of CO 2 uptake with temperature was observed and dryness influence overrules temperature influence.

  14. Biomass Allocation Patterns across China’s Terrestrial Biomes

    Science.gov (United States)

    Wang, Limei; Li, Longhui; Chen, Xi; Tian, Xin; Wang, Xiaoke; Luo, Geping

    2014-01-01

    Root to shoot ratio (RS) is commonly used to describe the biomass allocation between below- and aboveground parts of plants. Determining the key factors influencing RS and interpreting the relationship between RS and environmental factors is important for biological and ecological research. In this study, we compiled 2088 pairs of root and shoot biomass data across China’s terrestrial biomes to examine variations in the RS and its responses to biotic and abiotic factors including vegetation type, soil texture, climatic variables, and stand age. The median value of RS (RSm) for grasslands, shrublands, and forests was 6.0, 0.73, and 0.23, respectively. The range of RS was considerably wide for each vegetation type. RS values for all three major vegetation types were found to be significantly correlated to mean annual precipitation (MAP) and potential water deficit index (PWDI). Mean annual temperature (MAT) also significantly affect the RS for forests and grasslands. Soil texture and forest origin altered the response of RS to climatic factors as well. An allometric formula could be used to well quantify the relationship between aboveground and belowground biomass, although each vegetation type had its own inherent allometric relationship. PMID:24710503

  15. Climate control of terrestrial carbon exchange across biomes and continents

    Energy Technology Data Exchange (ETDEWEB)

    Yi Chuixiang; Wolbeck, John; Xu Xiyan [School of Earth and Environmental Sciences, Queens College, City University of New York, NY 11367 (United States); Ricciuto, Daniel [Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 (United States); Li Runze [Department of Statistics, Pennsylvania State University, University Park, PA 16802 (United States); Nilsson, Mats [Department of Forest Ecology, Swedish University of Agricultural Sciences, SE-901 83 Umeaa (Sweden); Aires, Luis [CESAM and Department of Environmental Engineering, School of Technology and Management, Polytechnic Institute of Leiria (Portugal); Albertson, John D [Department of Civil and Environmental Engineering, Duke University, Durham, NC 22708-0287 (United States); Ammann, Christof [Federal Research Station Agroscope Reckenholz-Taenikon, Reckenholzstrasse 191, 8046 Zuerich (Switzerland); Arain, M Altaf [School of Geography and Earth Sciences, McMaster University, Hamilton, ON, L8S 4K1 (Canada); De Araujo, Alessandro C [Instituto Nacional de Pesquisas da Amazonia, Programa LBA, Campus-II, Manaus-Amazonas 69060 (Brazil); Aubinet, Marc [University of Liege, Gembloux Agro-Bio Tech, Unit of Biosystem Physics, 2 Passage des Deportes, 5030 Gembloux (Belgium); Aurela, Mika [Finnish Meteorological Institute, Climate Change Research, FI-00101 Helsinki (Finland); Barcza, Zoltan [Department of Meteorology, Eoetvoes Lorand University, H-1117 Budapest, Pazmany setany 1/A (Hungary); Barr, Alan [Climate Research Division, Environment Canada, Saskatoon, SK, S7N 3H5 (Canada); Berbigier, Paul [INRA, UR1263 EPHYSE, Villenave d' Ornon F-33883 (France); Beringer, Jason [School of Geography and Environmental Science, Monash University, Clayton, Victoria 3800 (Australia); Bernhofer, Christian [Institute of Hydrology and Meteorology, Dresden University of Technology, Pienner Strasse 23, D-01737, Tharandt (Germany)

    2010-07-15

    Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO{sub 2} exchange with the atmosphere across biomes and continents are lacking. Here we present data describing the relationships between net ecosystem exchange of carbon (NEE) and climate factors as measured using the eddy covariance method at 125 unique sites in various ecosystems over six continents with a total of 559 site-years. We find that NEE observed at eddy covariance sites is (1) a strong function of mean annual temperature at mid- and high-latitudes, (2) a strong function of dryness at mid- and low-latitudes, and (3) a function of both temperature and dryness around the mid-latitudinal belt (45 deg. N). The sensitivity of NEE to mean annual temperature breaks down at {approx} 16 deg. C (a threshold value of mean annual temperature), above which no further increase of CO{sub 2} uptake with temperature was observed and dryness influence overrules temperature influence.

  16. Biome-BGC: Terrestrial Ecosystem Process Model, Version 4.1.1

    Data.gov (United States)

    National Aeronautics and Space Administration — Biome-BGC is a computer program that estimates fluxes and storage of energy, water, carbon, and nitrogen for the vegetation and soil components of terrestrial...

  17. LiDAR-based Biomass Estimates, Boreal Forest Biome, Eurasia, 2005-2006

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set provides estimates of aboveground biomass (AGB) for defined land cover types within World Wildlife Fund (WWF) ecoregions across the boreal biome of...

  18. Biome-BGC: Terrestrial Ecosystem Process Model, Version 4.1.1

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: Biome-BGC is a computer program that estimates fluxes and storage of energy, water, carbon, and nitrogen for the vegetation and soil components of...

  19. NACP LiDAR-based Biomass Estimates, Boreal Forest Biome, North America, 2005-2006

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set provides estimates of aboveground biomass (AGB) for defined land cover types within World Wildlife Fund (WWF) ecoregions across the boreal biome of...

  20. BIOME: A scientific data archive search-and-order system using browser-aware, dynamic pages

    Science.gov (United States)

    Jennings, S. V.; Yow, T. G.; Ng, V. W.

    1997-01-01

    The Oak Ridge National Laboratory's (ORNL) Distributed Active Archive Center (DAAC) is a data archive and distribution center for the National Air and Space Administration's (NASA) Earth Observing System Data and Information System (EOSDIS). Both the Earth Observing System (EOS) and EOSDIS are components of NASA's contribution to the US Global Change Research Program through its Mission to Planet Earth Program. The ORNL DAAC provides access to data used in ecological and environmental research such as global change, global warming, and terrestrial ecology. Because of its large and diverse data holdings, the challenge for the ORNL DAAC is to help users find data of interest from the hundreds of thousands of files available at the DAAC without overwhelming them. Therefore, the ORNL DAAC has developed the Biogeochemical Information Ordering Management Environment (BIOME), a customized search and order system for the World Wide Web (WWW). BIOME is a public system located at http://www-eosdis. ornl.gov/BIOME/biome.html.

  1. NPP Multi-Biome: Summary Data from Intensive Studies at 125 Sites, 1936-2006

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set, NPP Multi-Biome: Summary Data from Intensive Studies at 125 Sites, 1936-2006, contains a single shapefile that provides site-level summary statistics...

  2. Pre-ABoVE: Arctic Vegetation Plots, IBP Tundra Biome, Barrow, Alaska, 1972-2010

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set provides vegetation cover and environmental plot data collected as part of the International Biological Program (IBP), U. S. Tundra Biome Program, in...

  3. Remotely sensed vegetation phenology for describing and predicting the biomes of South Africa

    CSIR Research Space (South Africa)

    Wessels, Konrad J

    2011-02-01

    Full Text Available What are the patterns of remotely sensed vegetation phenology, including their inter-annual variability, across South Africa? What are the phenological attributes that contribute most to distinguishing the different biomes? How well can...

  4. NACP Biome-BGC Modeled Ecosystem Carbon Balance, Pacific Northwest, USA, 1986-2010

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set provides Biome-BGC modeled estimates of carbon stocks and fluxes in the U.S. Pacific Northwest for the years 1986-2010. Fluxes include net ecosystem...

  5. Use of BIOME-BGG to simulate Mediterranean forest carbon stocks

    OpenAIRE

    Chirici G; Barbati A; Salvati R; Maselli F; Chiesi M

    2011-01-01

    BIOME-BGC is a bio-geochemical model capable of estimating the water, carbon and nitrogen fluxes and storages of terrestrial ecosystems. Previous research demonstrated that, after proper calibration of its ecophysiological parameters, the model can reproduce the main processes of Mediterranean forest types. The same investigations, however, indicated a model tendency to overestimate woody biomass accumulation. The current paper aims at modifying BIOME-BGC ecophysiological settings to improve ...

  6. Shift of biome patterns due to simulated climate variability and climate change

    International Nuclear Information System (INIS)

    Claussen, M.

    1993-01-01

    The variability of simulated equilibrium-response patterns of biomes caused by simulated climate variability and climate shift is analysed. This investigation is based on various realisations of simulated present-day climate and climate shift. It has been found that the difference between biomes computed from three 10-year climatologies and from the corresponding 30-year climatology, simulated by the Hamburg climate model at T21 resolution, amounts to approximately 6% of the total land area, Antarctica excluded. This difference is mainly due to differences in annual moisture availability and winter temperatures. When intercomparing biomes from the 10-year climatologies a 10% difference is seen, but there is no unique difference pattern. In contrast to the interdecadal variability, the shift of conditions favorable for biomes due to a shift in climate in the next 100 years, caused by an increase in sea-surface temperatures and atmospheric CO 2 , reveals a unique trend pattern. It turns out that the strongest and most significant signal is the north-east shift of conditions for boreal biomes. This signal is caused by an increase of annual temperature sums as well as mean temperatures of the coldest and warmest months. Trends in annual moisture availability are of secondary importance globally. Regionally, a decrease in water availability affects biomes in Central and East Europe and an increase of water availability leads to a potential increase in tropical rain forest. In total, all differences amount to roughly 30% of the total land surface, Antarctica excluded. (orig./KW)

  7. Modeling the grazing effect on dry grassland carbon cycling with modified Biome-BGC grazing model

    Science.gov (United States)

    Luo, Geping; Han, Qifei; Li, Chaofan; Yang, Liao

    2014-05-01

    Identifying the factors that determine the carbon source/sink strength of ecosystems is important for reducing uncertainty in the global carbon cycle. Arid grassland ecosystems are a widely distributed biome type in Xinjiang, Northwest China, covering approximately one-fourth the country's land surface. These grasslands are the habitat for many endemic and rare plant and animal species and are also used as pastoral land for livestock. Using the modified Biome-BGC grazing model, we modeled carbon dynamics in Xinjiang for grasslands that varied in grazing intensity. In general, this regional simulation estimated that the grassland ecosystems in Xinjiang acted as a net carbon source, with a value of 0.38 Pg C over the period 1979-2007. There were significant effects of grazing on carbon dynamics. An over-compensatory effect in net primary productivity (NPP) and vegetation carbon (C) stock was observed when grazing intensity was lower than 0.40 head/ha. Grazing resulted in a net carbon source of 23.45 g C m-2 yr-1, which equaled 0.37 Pg in Xinjiang in the last 29 years. In general, grazing decreased vegetation C stock, while an increasing trend was observed with low grazing intensity. The soil C increased significantly (17%) with long-term grazing, while the soil C stock exhibited a steady trend without grazing. These findings have implications for grassland ecosystem management as it relates to carbon sequestration and climate change mitigation, e.g., removal of grazing should be considered in strategies that aim to increase terrestrial carbon sequestrations at local and regional scales. One of the greatest limitations in quantifying the effects of herbivores on carbon cycling is identifying the grazing systems and intensities within a given region. We hope our study emphasizes the need for large-scale assessments of how grazing impacts carbon cycling. Most terrestrial ecosystems in Xinjiang have been affected by disturbances to a greater or lesser extent in the past

  8. USING LUDIC ACTIVITIES TO EXPLAIN THE BIOME CONCEPT

    Directory of Open Access Journals (Sweden)

    Aline Riccioni de Melos

    2015-12-01

    Full Text Available This paper contributes to research on the role of ludic activities in teaching and learning physical geography content during the last four years of primary school. We question the discourse that identifies students’ lack of interest as the obstacle to teaching physical geography. This study contributes by questioning this obstacle. We note that few studies exist on this topic, according to the CAPES (Coordination for higher Education Staff Development dissertation database, in 2011 only five were completed. The theoretical basis for the study considers work by Graciolli (2009, Silva et al. (2010, Rupel (2011 and Freitas and Salvi (2011, authors who defend the use of ludic activities in teaching methodology. In 2010, the “Biome Game” for 6th year students was developed based on this theoretical framework as part of the required course “Supervised Practice”. The goal of the activity was to think about how the concept of biome was created, and the methodology used valued recreational approaches. The empirical results of this experiment, which involved developing and implementing the game during the Supervised Practice course, demonstrate the importance of ludic pedagogical strategies for teaching physical geography in Brazilian primary education. O presente artigo traz contribuições de pesquisa sobre a função da ludicidade no ensino-aprendizagem de conteúdos da geografia física, no segundo segmento do ensino fundamental. Tal questão problematiza o discurso sobre o desinteresse dos alunos, como significativo obstáculo para a didática da geografia física. A pertinência do presente estudo está em reconhecer esta questão, tendo em vista que existem poucos estudos na área, totalizando em 2011, segundo o banco de dissertações da CAPES, somente cinco trabalhos concluídos. Nossa investigação dialoga com Graciolli (2009, Silva et al. (2010, Rupel (2011 e Freitas e Salvi (2011, autores dedicados à defesa da utilização de

  9. Assessing MODIS GPP in Non-Forested Biomes in Water Limited Areas Using EC Tower Data

    Directory of Open Access Journals (Sweden)

    Flor Álvarez-Taboada

    2015-03-01

    Full Text Available Although shrublands, savannas and grasslands account for 37% of the world’s terrestrial area, not many studies have analysed the role of these ecosystems in the global carbon cycle at a regional scale. The MODIS Gross Primary Production (GPP product is used here to help bridge this gap. In this study, the agreement between the MODIS GPP product (GPPm and the GPP Eddy Covariance tower data (GPPec was tested for six different sites in temperate and dry climatic regions (three grasslands, two shrublands and one evergreen forest. Results of this study show that for the non-forest sites in water-limited areas, GPPm is well correlated with GPPec at annual scales (r2 = 0.77, n = 12; SEE = 149.26 g C∙m−2∙year−1, although it tends to overestimate GPP and it is less accurate in the sites with permanent water restrictions. The use of biome-specific models based on precipitation measurements at a finer spatial resolution than the Data Assimilation Office (DAO values can increase the accuracy of these estimations. The seasonal dynamics and the beginning and end of the growing season were well captured by GPPm for the sites where (i the productivity was low throughout the year or (ii the changes in the flux trend were abrupt, usually due to the restrictions in water availability. The agreement between GPPec and GPPm in non-forested sites was lower on a weekly basis than at an annual scale (0.44 ≤ r2 ≤ 0.49, but these results were improved by including meteorological data at a finer spatial scale, and soil water content and temperature measurements in the model developed to predict GPPec (0.52 ≤ r2 ≤ 0.65.

  10. Microbial quality of soil from the Pampa biome in response to different grazing pressures

    Directory of Open Access Journals (Sweden)

    Rafael S. Vargas

    2015-06-01

    Full Text Available The aim of this study was to evaluate the impact of different grazing pressures on the activity and diversity of soil bacteria. We performed a long-term experiment in Eldorado do Sul, southern Brazil, that assessed three levels of grazing pressure: high pressure (HP, with 4% herbage allowance (HA, moderate pressure (MP, with 12% HA, and low pressure (LP, with 16% HA. Two reference areas were also assessed, one of never-grazed native vegetation (NG and another of regenerated vegetation after two years of grazing (RG. Soil samples were evaluated for microbial biomass and enzymatic (β-glucosidase, arylsulfatase and urease activities. The structure of the bacterial community and the population of diazotrophic bacteria were evaluated by RFLP of the 16S rRNA and nifH genes, respectively. The diversity of diazotrophic bacteria was assessed by partial sequencing of the 16S rDNA gene. The presence of grazing animals increased soil microbial biomass in MP and HP. The structures of the bacterial community and the populations of diazotrophic bacteria were altered by the different grazing managements, with a greater diversity of diazotrophic bacteria in the LP treatment. Based on the characteristics evaluated, the MP treatment was the most appropriate for animal production and conservation of the Pampa biome.

  11. The Interaction of Snow Physical Processes With Vegetation in Open and Forested Biomes

    Science.gov (United States)

    Pomeroy, J. W.

    2003-12-01

    It is well accepted that the physical processes which drive snowcover accumulation, redistribution, transformation and ablation are intimately governed by their interaction with the properties of both local and regional vegetation. It is more recently accepted that the type, structure and spatial distribution of vegetation are themselves affected by snow processes such that natural snow-vegetation-climate systems have evolved distinctive characteristics in various cold regions biomes. The human ecology of snow-vegetation systems is less well known, but extremely important as vegetation is managed to promote beneficial snow characteristics for the purposes of agricultural management in many snowy cultivated farming regions of the world. This paper will review recent field observations and descriptions of characteristic snow process-vegetation interactions and phenomena in various circumpolar biomes and the potential transferability of observed processes and snow-vegetation relationships amongst biomes in the circumpolar world. The spatial distributions of processes and states within a biome are shown to have important implications for aggregated descriptions of snow at the biome scale; the stability of these distributions will be emphasised.

  12. Combining climatic and soil properties better predicts covers of Brazilian biomes

    Science.gov (United States)

    Arruda, Daniel M.; Fernandes-Filho, Elpídio I.; Solar, Ricardo R. C.; Schaefer, Carlos E. G. R.

    2017-04-01

    Several techniques have been used to model the area covered by biomes or species. However, most models allow little freedom of choice of response variables and are conditioned to the use of climate predictors. This major restriction of the models has generated distributions of low accuracy or inconsistent with the actual cover. Our objective was to characterize the environmental space of the most representative biomes of Brazil and predict their cover, using climate and soil-related predictors. As sample units, we used 500 cells of 100 km2 for ten biomes, derived from the official vegetation map of Brazil (IBGE 2004). With a total of 38 (climatic and soil-related) predictors, an a priori model was run with the random forest classifier. Each biome was calibrated with 75% of the samples. The final model was based on four climate and six soil-related predictors, the most important variables for the a priori model, without collinearity. The model reached a kappa value of 0.82, generating a highly consistent prediction with the actual cover of the country. We showed here that the richness of biomes should not be underestimated, and that in spite of the complex relationship, highly accurate modeling based on climatic and soil-related predictors is possible. These predictors are complementary, for covering different parts of the multidimensional niche. Thus, a single biome can cover a wide range of climatic space, versus a narrow range of soil types, so that its prediction is best adjusted by soil-related variables, or vice versa.

  13. Combining climatic and soil properties better predicts covers of Brazilian biomes.

    Science.gov (United States)

    Arruda, Daniel M; Fernandes-Filho, Elpídio I; Solar, Ricardo R C; Schaefer, Carlos E G R

    2017-04-01

    Several techniques have been used to model the area covered by biomes or species. However, most models allow little freedom of choice of response variables and are conditioned to the use of climate predictors. This major restriction of the models has generated distributions of low accuracy or inconsistent with the actual cover. Our objective was to characterize the environmental space of the most representative biomes of Brazil and predict their cover, using climate and soil-related predictors. As sample units, we used 500 cells of 100 km 2 for ten biomes, derived from the official vegetation map of Brazil (IBGE 2004). With a total of 38 (climatic and soil-related) predictors, an a priori model was run with the random forest classifier. Each biome was calibrated with 75% of the samples. The final model was based on four climate and six soil-related predictors, the most important variables for the a priori model, without collinearity. The model reached a kappa value of 0.82, generating a highly consistent prediction with the actual cover of the country. We showed here that the richness of biomes should not be underestimated, and that in spite of the complex relationship, highly accurate modeling based on climatic and soil-related predictors is possible. These predictors are complementary, for covering different parts of the multidimensional niche. Thus, a single biome can cover a wide range of climatic space, versus a narrow range of soil types, so that its prediction is best adjusted by soil-related variables, or vice versa.

  14. Telemetria : aplicação de rede de sensores biomédicos sem fio

    OpenAIRE

    Gutiérrez, Eduardo Mamani

    2006-01-01

    O objetivo desta dissertação consiste no desenvolvimento de um protótipo de instrumentação biomédica, baseado na tecnologia de redes de sensores sem fio, para aquisição, transmissão e processamento simultâneos de sinais biomédicos. A instrumentação permite o acompanhamento clínico de pacientes por meio do monitoramento de sinais de eletrocardiograma, eletromiograma, temperatura cutânea, e resistência galvânica da pele; para este objetivo foram implementados circuitos eletrônicos. Os sinais re...

  15. Where do the treeless tundra areas of northern highlands fit in the global biome system: toward an ecologically natural subdivision of the tundra biome.

    Science.gov (United States)

    Virtanen, Risto; Oksanen, Lauri; Oksanen, Tarja; Cohen, Juval; Forbes, Bruce C; Johansen, Bernt; Käyhkö, Jukka; Olofsson, Johan; Pulliainen, Jouni; Tømmervik, Hans

    2016-01-01

    According to some treatises, arctic and alpine sub-biomes are ecologically similar, whereas others find them highly dissimilar. Most peculiarly, large areas of northern tundra highlands fall outside of the two recent subdivisions of the tundra biome. We seek an ecologically natural resolution to this long-standing and far-reaching problem. We studied broad-scale patterns in climate and vegetation along the gradient from Siberian tundra via northernmost Fennoscandia to the alpine habitats of European middle-latitude mountains, as well as explored those patterns within Fennoscandian tundra based on climate-vegetation patterns obtained from a fine-scale vegetation map. Our analyses reveal that ecologically meaningful January-February snow and thermal conditions differ between different types of tundra. High precipitation and mild winter temperatures prevail on middle-latitude mountains, low precipitation and usually cold winters prevail on high-latitude tundra, and Scandinavian mountains show intermediate conditions. Similarly, heath-like plant communities differ clearly between middle latitude mountains (alpine) and high-latitude tundra vegetation, including its altitudinal extension on Scandinavian mountains. Conversely, high abundance of snowbeds and large differences in the composition of dwarf shrub heaths distinguish the Scandinavian mountain tundra from its counterparts in Russia and the north Fennoscandian inland. The European tundra areas fall into three ecologically rather homogeneous categories: the arctic tundra, the oroarctic tundra of northern heights and mountains, and the genuinely alpine tundra of middle-latitude mountains. Attempts to divide the tundra into two sub-biomes have resulted in major discrepancies and confusions, as the oroarctic areas are included in the arctic tundra in some biogeographic maps and in the alpine tundra in others. Our analyses based on climate and vegetation criteria thus seem to resolve the long-standing biome

  16. Carbon storage in permafrost and soils of the mammoth tundra-steppe biome: role in the global carbon budget

    Science.gov (United States)

    N.S. Zimov; S.A. Zimov; A.E. Zimova; G.M. Zimova; V.I. Chuprynin; F.S. Chapin

    2009-01-01

    During the Last Glacial Maximum (LGM), atmospheric CO2 concentration was 80-100 ppmv lower than in preindustrial times. At that time steppe-tundra was the most extensive biome on Earth. Some authors assume that C storage in that biome was very small, similar to today's deserts, and that the terrestrial carbon (C) reservoir increased at the...

  17. Colombian dry moist forest transitions in the Llanos Orientales - A comparison of model and pollen-based biome reconstructions

    NARCIS (Netherlands)

    Marchant, R.A.; Berrio, J.C.; Behling, H.; Boom, A.; Hooghiemstra, H.

    2006-01-01

    Abstract Colombian vegetation, at the ecological level of the biome, is reconstructed at six sites using pollen data assigned a priori to plant functional types and biomes. The chosen sites incorporate four savanna sites (Laguna Sardinas, Laguna Angel, El Piñal and Laguna Carimagua), a site on the

  18. Biogeographical distribution analysis of hydrocarbon degrading and biosurfactant producing genes suggests that near-equatorial biomes have higher abundance of genes with potential for bioremediation.

    Science.gov (United States)

    Oliveira, Jorge S; Araújo, Wydemberg J; Figueiredo, Ricardo M; Silva-Portela, Rita C B; de Brito Guerra, Alaine; da Silva Araújo, Sinara Carla; Minnicelli, Carolina; Carlos, Aline Cardoso; de Vasconcelos, Ana Tereza Ribeiro; Freitas, Ana Teresa; Agnez-Lima, Lucymara F

    2017-07-27

    Bacterial and Archaeal communities have a complex, symbiotic role in crude oil bioremediation. Their biosurfactants and degradation enzymes have been in the spotlight, mainly due to the awareness of ecosystem pollution caused by crude oil accidents and their use. Initially, the scientific community studied the role of individual microbial species by characterizing and optimizing their biosurfactant and oil degradation genes, studying their individual distribution. However, with the advances in genomics, in particular with the use of New-Generation-Sequencing and Metagenomics, it is now possible to have a macro view of the complex pathways related to the symbiotic degradation of hydrocarbons and surfactant production. It is now possible, although more challenging, to obtain the DNA information of an entire microbial community before automatically characterizing it. By characterizing and understanding the interconnected role of microorganisms and the role of degradation and biosurfactant genes in an ecosystem, it becomes possible to develop new biotechnological approaches for bioremediation use. This paper analyzes 46 different metagenome samples, spanning 20 biomes from different geographies obtained from different research projects. A metagenomics bioinformatics pipeline, focused on the biodegradation and biosurfactant-production pathways, genes and organisms, was applied. Our main results show that: (1) surfactation and degradation are correlated events, and therefore should be studied together; (2) terrestrial biomes present more degradation genes, especially cyclic compounds, and less surfactation genes, when compared to water biomes; and (3) latitude has a significant influence on the diversity of genes involved in biodegradation and biosurfactant production. This suggests that microbiomes found near the equator are richer in genes that have a role in these processes and thus have a higher biotechnological potential. In this work we have focused on the

  19. Regional Atmospheric CO2 Inversion Reveals Seasonal and Geographic Differences in Amazon Net Biome Exchange

    Science.gov (United States)

    Alden, Caroline B.; Miller, John B.; Gatti, Luciana V.; Gloor, Manuel M.; Guan, Kaiyu; Michalak, Anna M.; van der Laan-Luijkx, Ingrid; Touma, Danielle; Andrews, Arlyn; Basso, Luana G.; hide

    2016-01-01

    Understanding tropical rainforest carbon exchange and its response to heat and drought is critical for quantifying the effects of climate change on tropical ecosystems, including global climate carbon feedbacks. Of particular importance for the global carbon budget is net biome exchange of CO2 with the atmosphere (NBE), which represents nonfire carbon fluxes into and out of biomass and soils. Subannual and sub-Basin Amazon NBE estimates have relied heavily on process-based biosphere models, despite lack of model agreement with plot-scale observations. We present a new analysis of airborne measurements that reveals monthly, regional-scale (Approx.1-8 x 10(exp -6) km2) NBE variations. We develop a regional atmospheric CO2 inversion that provides the first analysis of geographic and temporal variability in Amazon biosphere-atmosphere carbon exchange and that is minimally influenced by biosphere model-based first guesses of seasonal and annual mean fluxes. We find little evidence for a clear seasonal cycle in Amazon NBE but do find NBE sensitivity to aberrations from long-term mean climate. In particular, we observe increased NBE (more carbon emitted to the atmosphere) associated with heat and drought in 2010, and correlations between wet season NBE and precipitation (negative correlation) and temperature (positive correlation). In the eastern Amazon, pulses of increased NBE persisted through 2011, suggesting legacy effects of 2010 heat and drought. We also identify regional differences in postdrought NBE that appear related to long-term water availability. We examine satellite proxies and find evidence for higher gross primary productivity (GPP) during a pulse of increased carbon uptake in 2011, and lower GPP during a period of increased NBE in the 2010 dry season drought, but links between GPP and NBE changes are not conclusive. These results provide novel evidence of NBE sensitivity to short-term temperature and moisture extremes in the Amazon, where monthly and sub

  20. Selection, isolation, and identification of fungi for bioherbicide production

    OpenAIRE

    Souza, Ang?lica Rossana Castro de; Baldoni, Daiana Bortoluzzi; Lima, Jessica; Porto, Vit?ria; Marcuz, Camila; Machado, Carolina; Ferraz, Rafael Camargo; Kuhn, Raquel C.; Jacques, Rodrigo J.S.; Guedes, Jerson V.C.; Mazutti, Marcio A.

    2016-01-01

    Abstract Production of a bioherbicide for biological control of weeds requires a series of steps, from selection of a suitable microbial strain to final formulation. Thus, this study aimed to select fungi for production of secondary metabolites with herbicidal activity using biological resources of the Brazilian Pampa biome. Phytopathogenic fungi were isolated from infected tissues of weeds in the Pampa biome. A liquid synthetic culture medium was used for production of metabolites. The phyto...

  1. Optimizing selective cutting strategies for maximum carbon stocks and yield of Moso bamboo forest using BIOME-BGC model.

    Science.gov (United States)

    Mao, Fangjie; Zhou, Guomo; Li, Pingheng; Du, Huaqiang; Xu, Xiaojun; Shi, Yongjun; Mo, Lufeng; Zhou, Yufeng; Tu, Guoqing

    2017-04-15

    The selective cutting method currently used in Moso bamboo forests has resulted in a reduction of stand productivity and carbon sequestration capacity. Given the time and labor expense involved in addressing this problem manually, simulation using an ecosystem model is the most suitable approach. The BIOME-BGC model was improved to suit managed Moso bamboo forests, which was adapted to include age structure, specific ecological processes and management measures of Moso bamboo forest. A field selective cutting experiment was done in nine plots with three cutting intensities (high-intensity, moderate-intensity and low-intensity) during 2010-2013, and biomass of these plots was measured for model validation. Then four selective cutting scenarios were simulated by the improved BIOME-BGC model to optimize the selective cutting timings, intervals, retained ages and intensities. The improved model matched the observed aboveground carbon density and yield of different plots, with a range of relative error from 9.83% to 15.74%. The results of different selective cutting scenarios suggested that the optimal selective cutting measure should be cutting 30% culms of age 6, 80% culms of age 7, and all culms thereafter (above age 8) in winter every other year. The vegetation carbon density and harvested carbon density of this selective cutting method can increase by 74.63% and 21.5%, respectively, compared with the current selective cutting measure. The optimized selective cutting measure developed in this study can significantly promote carbon density, yield, and carbon sink capacity in Moso bamboo forests. Copyright © 2017 Elsevier Ltd. All rights reserved.

  2. Selection of native trees for intercropping with coffee in the Atlantic Rainforest biome

    NARCIS (Netherlands)

    Souza, de H.N.; Cardoso, I.M.; Fernandes, J.M.; Garcia, F.C.P.; Bonfim, V.R.; Santos, A.C.; Carvalho, A.F.; Mendonca, E.S.

    2010-01-01

    A challenge in establishing agroforestry systems is ensuring that farmers are interested in the tree species, and are aware of how to adequately manage these species. This challenge was tackled in the Atlantic Rainforest biome (Brazil), where a participatory trial with agroforestry coffee systems

  3. Regional atmospheric CO2 inversion reveals seasonal and geographic differences in Amazon net biome exchange

    NARCIS (Netherlands)

    Alden, C.B.; Miller, J.B.; Gatti, L.V.; Gloor, M.M.; Laan-Luijkx, van der I.T.; Krol, M.C.; Guan, K.; Michalak, A.M.; Touma, T.; Andrew, A.; Basso, L.S.; Correia, C.S.C.; Domingues, L.G.; Joiner, J.; Lyapustin, A.; Peters, W.; Shiga, Y.P.; Thoning, K.; Velde, van der I.R.; Leeuwen van, T.T.; Yadav, V.; Diffenbaugh, N.S.

    2016-01-01

    Understanding tropical rainforest carbon exchange and its response to heat and drought is critical for quantifying the effects of climate change on tropical ecosystems, including global climate–carbon feedbacks. Of particular importance
    for the global carbon budget is net biome exchange of CO2

  4. Isolation and phylogenetic relationships of bat trypanosomes from different biomes in Mato Grosso, Brazil.

    Science.gov (United States)

    Marcili, Arlei; da Costa, Andrea P; Soares, Herbert S; Acosta, Igor da C L; de Lima, Julia T R; Minervino, Antonio H H; Melo, Andréia T L; Aguiar, Daniel M; Pacheco, Richard C; Gennari, Solange M

    2013-12-01

    In the order Chiroptera, more than 30 trypanosome species belonging to the subgenera Herpetosoma, Schizotrypanum, Megatrypanum, and Trypanozoon have been described. The species Trypanosoma cruzi , Trypanosoma cruzi marinkellei, and Trypanosoma dionisii are the most common in bats and belong to the Schizotrypanum subgenus. Bats from 2 different biomes, Pantanal and Amazonia/Cerrado in the state of Mato Grosso, Brazil, were evaluated according to the presence of trypanosome parasites by means of hemoculture and PCR in primary samples (blood samples). A total of 211 bats from 20 different species were caught and the trypanosome prevalence, evaluated through hemoculture, was 9.0% (19), 15.5% (13), and 4.8% (6) in the municipalities of Confresa (Amazonia/Cerrado biome) and Poconé (Pantanal biome). Among the 123 primary samples obtained from the bats, only 3 (2.4%) were positive. Phylogenetic analysis using trypanosomatid barcoding (V7V8 region of SSU rDNA) identified all the isolates and primary samples as T. c. marinkellei. The sequences of the isolates were segregated according to the bat host genus or species and suggest that co-evolutionary patterns exist between hosts and parasites. Further studies in different Brazilian regions and biomes need to be conducted in order to gain real understanding of the diversity of trypanosomes in bats.

  5. Assessing the Urban Heat Island Effect Across Biomes in the Continental USA Using Landsat and MODIS

    Science.gov (United States)

    Imhoff, Marc L.; Bounoua, L.; Zhang, Ping; Wolfe, Robert

    2011-01-01

    Impervious surface area (ISA) from the Landsat TM and land surface temperature (LST) from MODIS averaged over three annual cycles (2003-2005) are used in a spatial analysis to assess the urban heat island (UHI) skin temperature amplitude and its relationship to development intensity, size, and ecological setting for 38 of the most populous cities in the continental United States. Development intensity zones based on %ISA are defined across urban gradients and used to stratify sampling of LST and NDVI. We find that ecological context significantly influences the amplitude of summer daytime UHI (urban - rural temperature difference) with the largest 8 C (average) for cities built in mixed forest biomes. For all cities ISA is the primary driver for increase in temperature explaining 70% of the total variance. Annually, urban areas are warmer than the non-urban fringe by 2.9 C, except in biomes with arid and semiarid climates. The average amplitude of the UHI is asymmetric with a 4.3 C difference in summer and 1.3 C in winter. In desert environments, UHI's point to a possible heat sink effect. Results show that the urban heat island amplitude increases with city size and is seasonally asymmetric for a large number of cities across most biomes. The implications are that for urban areas developed within forested ecosystems the summertime UHI can be quite high relative to the wintertime UHI suggesting that the residential energy consumption required for summer cooling is likely to increase with urban growth within those biomes.

  6. Explicit Not Implicit Preferences Predict Conservation Intentions for Endangered Species and Biomes.

    Science.gov (United States)

    Echeverri, Alejandra; Callahan, Megan M; Chan, Kai M A; Satterfield, Terre; Zhao, Jiaying

    2017-01-01

    Conservation of biodiversity is determined in part by human preferences. Preferences relevant to conservation have been examined largely via explicit measures (e.g., a self-reported degree of liking), with implicit measures (e.g., preconscious, automatic evaluations) receiving relatively less attention. This is the case despite psychological evidence from other contexts that implicit preferences are more informative of behavior. Thus, the type of measure that predicts conservation intentions for biodiversity is unknown. We conducted three studies to examine conservation intentions in light of people's explicit and implicit preferences toward four endangered species (sea otter, American badger, caribou, yellow-breasted chat) and four biomes (forest, ocean, grassland, tundra). In Study 1 (n = 55), we found that people implicitly preferred caribou most, but explicitly preferred sea otter most, with a significant multiple regression where participants' explicit preferences dictated their stated intended donations for conservation of each species. In Study 2 (n = 57) we found that people implicitly and explicitly preferred forest and ocean over grassland and tundra. Explicit rather than implicit preferences predicted the intended donation for conservation of the ocean biome. Study 3 involved a broader online sample of participants (n = 463) and also found that explicit preferences dictated the intended donations for conservation of biomes and species. Our findings reveal discrepancies between implicit and explicit preferences toward species, but not toward biomes. Importantly, the results demonstrate that explicit rather than implicit preferences predict conservation intentions for biodiversity. The current findings have several implications for conservation and the communication of biodiversity initiatives.

  7. The Biome Project: Developing a Legitimate Parallel Curriculum for Physical Education and Life Sciences

    Science.gov (United States)

    Hastie, Peter Andrew

    2013-01-01

    The purpose of this article is to describe the outcomes of a parallel curriculum project between life sciences and physical education. Throughout a 6-week period, students in grades two through five became members of teams that represented different animal species and biomes, and concurrently participated in a season of gymnastics skills and…

  8. Himalayan uplift shaped biomes in Miocene temperate Asia: evidence from leguminous Caragana

    Science.gov (United States)

    Ming-Li Zhang; Xiao-Guo Xiang; Juan-Juan Xue; Stewart C. Sanderson; Peter W. Fritsch

    2016-01-01

    Caragana, with distinctive variation in leaf and rachis characters, exhibits three centers of geographic distribution, i.e., Central Asia, the Qinghai-Tibetan Plateau (QTP), and East Asia, corresponding to distinct biomes. Because Caragana species are often ecologically dominant components of the vegetation in these regions, it is regarded as a key taxon for...

  9. A reconstruction of Colombian biomes derived from modern pollen data along an altitude gradient.

    NARCIS (Netherlands)

    Marchant, R.A.; Behling, H.; Berrio Mogollon, J.C.; Cleef, A.M.; Duivenvoorden, J.F.; van Geel, B.; van der Hammen, T.; Hooghiemstra, H.; Kuhry, P.; Melief, B.M.; van Reenen, G.B.A.; Wille, M.

    2001-01-01

    Biomes are reconstructed in Colombia from modern (core-top) pollen data derived from twenty-two sites along an altitudinal gradient (2000 to 4100 m) that encompasses the tree line. The 'biomization' methodology is described in a stepwise manner that details the reconstruction of vegetation along an

  10. A reconstruction of Colombian biomes derived from modern pollen data along an altitude gradient

    NARCIS (Netherlands)

    Marchant, R.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Helmens, K.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Schreve-Brinkman, E.; Geel, van B.; Reenen, van G.; Hammen, van der T.

    2001-01-01

    Biomes are reconstructed in Colombia from modern (core-top) pollen data derived from 22 sites along an altitudinal gradient (2000–4100 m) that encompasses the tree line. The `biomization' methodology is described in a stepwise manner that details the reconstruction of vegetation along an altitudinal

  11. Water balance in paired watersheds with eucalyptus and degraded grassland in Pampa biome

    Science.gov (United States)

    Rangelands of the Pampa biome, which cover regions of Argentina, Uruguay and Brazil (176,496 km2 – 2.07% of Brazilian territory and 63% of Rio Grande do Sul State territory, southern region of Brazil) in South America (total area of 750,000 km2), are being substituted by crops and commercial eucalyp...

  12. Description of major vegetation categories in and adjacent to the Fynbos biome

    CSIR Research Space (South Africa)

    Moll, EJ

    1984-03-01

    Full Text Available A scheme of major categories of the vegetation in and adjacent to the fynbos biome is given as a second approximation after Acocks1 Veld Types (1953). A four tier hierarchy is presented with nineteen categories of vegetation. The major subdivisions...

  13. Environmental Literacy through Relationships: Connecting Biomes and Society in a Sustainable City

    Science.gov (United States)

    Haverkos, Kimberly; Bautista, Nazan

    2011-01-01

    In this article, the authors share a project developed and implemented in an eighth-grade science classroom in which students apply what they have learned about biomes to create sustainable cities. This project promotes environmental literacy through helping students understand the interrelated elements of sustainable environmental systems and how…

  14. The freezer defrosting: global warming and litter decomposition rates in cold biomes. Essay review.

    NARCIS (Netherlands)

    Aerts, R.

    2006-01-01

    1 Decomposition of plant litter, a key component of the global carbon budget, is hierarchically controlled by the triad: climate > litter quality > soil organisms. Given the sensitivity of decomposition to temperature, especially in cold biomes, it has been hypothesized that global warming will lead

  15. Late Quaternary and future biome simulations for Alaska and Eastern Russia

    Science.gov (United States)

    Hendricks, Amy S.

    Arctic biomes across a region including Alaska and Eastern Russia were investigated using the BIOME4 biogeochemical and biogeography vegetation model. This study investigated past (the last 21,000 years), present, and future vegetation distributions in the study area, using climate forcing from five CMIP5 models (CCSM4, GISS-E2-R, MIROC-ESM, MPI-ESM, and MRI-CGCM3). The present-day BIOME4 simulations were generally consistent with current vegetation observations in the study region characterized by evergreen and deciduous taiga and shrub tundras. Paleoclimatological simulations were compared with pollen data samples collected in the study region. Pre-industrial biome simulations are generally similar to the modern reconstruction but differ by having more shrub tundra in both Russia and Alaska to the north, as well as less deciduous taiga in Alaska. Pre-industrial simulations were in good agreement with the pollen data. Mid-Holocene simulations place shrub tundras along the Arctic coast, and in some cases along the eastern coast of Russia. Simulations for the Mid-Holocene are in good agreement with pollen-based distributions of biomes. Simulations for the Last Glacial Maximum (LGM) show that the Bering Land Bridge was covered almost entirely by cushion forb, lichen and moss tundra, shrub tundra, and graminoid tundra. Three out of the five models' climate data produce evergreen and deciduous taiga in what is now southwestern Alaska, however the pollen data does not support this. The distributions of cushion forb, lichen, and moss tundra and graminoid tundra differ noticeably between models, while shrub tundra distributions are generally similar. Future simulations of BIOME4 based on the RCP8.5 climate scenario indicate a northward shift of the treeline and a significant areal decrease of shrub tundra and graminoid tundra regions in the 21st century. Intrusions of cool mixed, deciduous, and conifer forests above 60°N, especially in southwest Alaska, were notable

  16. Pollen-based biome reconstructions for Colombia at 3000, 6000, 15 000 and 18 000 14C yr ago : Late Quaternary tropical vegetation dynamics

    NARCIS (Netherlands)

    Marchant, R.; Behling, H.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Schreve-Brinkman, E.; Geel, van B.; Hammen, van der T.; Reenen, van G.

    2002-01-01

    Colombian biomes are reconstructed at 45 sites from the modern period extending to the Last Glacial Maximum (LGM). The basis for our reconstruction is pollen data assigned to plant functional types and biomes at six 3000-yr intervals. A reconstruction of modern biomes is used to check the treatment

  17. Aura-biomes are present in the water layer above coral reef benthic macro-organisms.

    Science.gov (United States)

    Walsh, Kevin; Haggerty, J Matthew; Doane, Michael P; Hansen, John J; Morris, Megan M; Moreira, Ana Paula B; de Oliveira, Louisi; Leomil, Luciana; Garcia, Gizele D; Thompson, Fabiano; Dinsdale, Elizabeth A

    2017-01-01

    As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1) the coral Mussismilia braziliensis , (2) fleshy macroalgae ( Stypopodium , Dictota and Canistrocarpus ), (3) turf algae, and (4) the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific "aura-biome". The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria , Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

  18. Estimating 40 years of nitrogen deposition in global biomes using the SCIAMACHY NO2 column

    Science.gov (United States)

    Lu, Xuehe; Zhang, Xiuying; Liu, Jinxun; Jin, Jiaxin

    2016-01-01

    Owing to human activity, global nitrogen (N) cycles have been altered. In the past 100 years, global N deposition has increased. Currently, the monitoring and estimating of N deposition and the evaluation of its effects on global carbon budgets are the focus of many researchers. NO2 columns retrieved by space-borne sensors provide us with a new way of exploring global N cycles and these have the ability to estimate N deposition. However, the time range limitation of NO2 columns makes the estimation of long timescale N deposition difficult. In this study we used ground-based NOx emission data to expand the density of NO2columns, and 40 years of N deposition (1970–2009) was inverted using the multivariate linear model with expanded NO2 columns. The dynamic of N deposition was examined in both global and biome scales. The results show that the average N deposition was 0.34 g N m–2 year–1 in the 2000s, which was an increase of 38.4% compared with the 1970s’. The total N deposition in different biomes is unbalanced. N deposition is only 38.0% of the global total in forest biomes; this is made up of 25.9%, 11.3, and 0.7% in tropical, temperate, and boreal forests, respectively. As N-limited biomes, there was little increase of N deposition in boreal forests. However, N deposition has increased by a total of 59.6% in tropical forests and croplands, which are N-rich biomes. Such characteristics may influence the effects on global carbon budgets.

  19. Forgotten forests - issues and prospects in biome mapping using Seasonally Dry Tropical Forests as a case study

    Directory of Open Access Journals (Sweden)

    Särkinen Tiina

    2011-11-01

    Full Text Available Abstract Background South America is one of the most species diverse continents in the world. Within South America diversity is not distributed evenly at both local and continental scales and this has led to the recognition of various areas with unique species assemblages. Several schemes currently exist which divide the continental-level diversity into large species assemblages referred to as biomes. Here we review five currently available biome maps for South America, including the WWF Ecoregions, the Americas basemap, the Land Cover Map of South America, Morrone's Biogeographic regions of Latin America, and the Ecological Systems Map. The comparison is performed through a case study on the Seasonally Dry Tropical Forest (SDTF biome using herbarium data of habitat specialist species. Results Current biome maps of South America perform poorly in depicting SDTF distribution. The poor performance of the maps can be attributed to two main factors: (1 poor spatial resolution, and (2 poor biome delimitation. Poor spatial resolution strongly limits the use of some of the maps in GIS applications, especially for areas with heterogeneous landscape such as the Andes. Whilst the Land Cover Map did not suffer from poor spatial resolution, it showed poor delimitation of biomes. The results highlight that delimiting structurally heterogeneous vegetation is difficult based on remote sensed data alone. A new refined working map of South American SDTF biome is proposed, derived using the Biome Distribution Modelling (BDM approach where georeferenced herbarium data is used in conjunction with bioclimatic data. Conclusions Georeferenced specimen data play potentially an important role in biome mapping. Our study shows that herbarium data could be used as a way of ground-truthing biome maps in silico. The results also illustrate that herbarium data can be used to model vegetation maps through predictive modelling. The BDM approach is a promising new method in

  20. The Biological Observation Matrix (BIOM format or: how I learned to stop worrying and love the ome-ome

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    McDonald Daniel

    2012-07-01

    Full Text Available Abstract Background We present the Biological Observation Matrix (BIOM, pronounced “biome” format: a JSON-based file format for representing arbitrary observation by sample contingency tables with associated sample and observation metadata. As the number of categories of comparative omics data types (collectively, the “ome-ome” grows rapidly, a general format to represent and archive this data will facilitate the interoperability of existing bioinformatics tools and future meta-analyses. Findings The BIOM file format is supported by an independent open-source software project (the biom-format project, which initially contains Python objects that support the use and manipulation of BIOM data in Python programs, and is intended to be an open development effort where developers can submit implementations of these objects in other programming languages. Conclusions The BIOM file format and the biom-format project are steps toward reducing the “bioinformatics bottleneck” that is currently being experienced in diverse areas of biological sciences, and will help us move toward the next phase of comparative omics where basic science is translated into clinical and environmental applications. The BIOM file format is currently recognized as an Earth Microbiome Project Standard, and as a Candidate Standard by the Genomic Standards Consortium.

  1. Consistent shifts in spring vegetation green-up date across temperate biomes in China, 1982-2006.

    Science.gov (United States)

    Wu, Xiuchen; Liu, Hongyan

    2013-03-01

    Understanding spring phenology changes in response to the rapid climate change at biome-level is crucial for projecting regional ecosystem carbon exchange and climate-biosphere interactions. In this study, we assessed the long-term changes and responses to changing climate of the spring phenology in six temperate biomes of China by analyzing the global inventory monitoring and modeling studies (GIMMS) NOAA/AVHRR Normalized Difference Vegetation Index (NDVI) and concurrent mean temperature and precipitation data for 1982-2006. Results show that the spring phenology trends in the six temperate biomes are not continuous throughout the 25 year period. The spring phenology in most areas of the six biomes showed obvious advancing trends (ranging from -0.09 to -0.65 day/yr) during the 1980s and early 1990s, but has subsequently suffered consistently delaying trends (ranging from 0.22 to 1.22 day/yr). Changes in spring (February-April) temperature are the dominating factor governing the pattern of spring vegetation phenology in the temperate biomes of China. The recently delayed spring phenology in these temperate biomes has been mainly triggered by the stalling or reversal of the warming trend in spring temperatures. Results in this study also reveal that precipitation during November-January can explain 16.1% (P biomes. © 2012 Blackwell Publishing Ltd.

  2. Future changes in South American biomass distributions, biome distributions and plant trait spectra is dependent on applied atmospheric forcings.

    Science.gov (United States)

    Langan, Liam; Scheiter, Simon; Higgins, Steven

    2017-04-01

    It remains poorly understood why the position of the forest-savanna biome boundary, in a domain defined by precipitation and temperature, differs in South America, Africa and Australia. Process based Dynamic Global Vegetation Models (DGVMs) are a valuable tool to investigate the determinants of vegetation distributions, however, many DGVMs fail to predict the spatial distribution or indeed presence of the South American savanna biome. Evidence suggests fire plays a significant role in mediating forest-savanna biome boundaries, however, fire alone appear to be insufficient to predict these boundaries in South America. We hypothesize that interactions between precipitation, constraints on tree rooting depth and fire, affect the probability of savanna occurrence and the position of the savanna-forest boundary. We tested our hypotheses at tropical forest and savanna sites in Brazil and Venezuela using a novel DGVM, aDGVM2, which allows plant trait spectra, constrained by trade-offs between traits, to evolve in response to abiotic and biotic conditions. Plant hydraulics is represented by the cohesion-tension theory, this allowed us to explore how soil and plant hydraulics control biome distributions and plant traits. The resulting community trait distributions are emergent properties of model dynamics. We showed that across much of South America the biome state is not determined by climate alone. Interactions between tree rooting depth, fire and precipitation affected the probability of observing a given biome state and the emergent traits of plant communities. Simulations where plant rooting depth varied in space provided the best match to satellite derived biomass estimates and generated biome distributions that reproduced contemporary biome maps well. Future projections showed that biomass distributions, biome distributions and plant trait spectra will change, however, the magnitude of these changes are highly dependent on the applied atmospheric forcings.

  3. Quantifying soil moisture impacts on light use efficiency across biomes.

    Science.gov (United States)

    Stocker, Benjamin D; Zscheischler, Jakob; Keenan, Trevor F; Prentice, I Colin; Peñuelas, Josep; Seneviratne, Sonia I

    2018-03-31

    Terrestrial primary productivity and carbon cycle impacts of droughts are commonly quantified using vapour pressure deficit (VPD) data and remotely sensed greenness, without accounting for soil moisture. However, soil moisture limitation is known to strongly affect plant physiology. Here, we investigate light use efficiency, the ratio of gross primary productivity (GPP) to absorbed light. We derive its fractional reduction due to soil moisture (fLUE), separated from VPD and greenness changes, using artificial neural networks trained on eddy covariance data, multiple soil moisture datasets and remotely sensed greenness. This reveals substantial impacts of soil moisture alone that reduce GPP by up to 40% at sites located in sub-humid, semi-arid or arid regions. For sites in relatively moist climates, we find, paradoxically, a muted fLUE response to drying soil, but reduced fLUE under wet conditions. fLUE identifies substantial drought impacts that are not captured when relying solely on VPD and greenness changes and, when seasonally recurring, are missed by traditional, anomaly-based drought indices. Counter to common assumptions, fLUE reductions are largest in drought-deciduous vegetation, including grasslands. Our results highlight the necessity to account for soil moisture limitation in terrestrial primary productivity data products, especially for drought-related assessments. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

  4. Nitrogen fertilization in the growth phase of 'Chardonnay' and 'Pinot Noir' vines and nitrogen forms in sandy soil of the Pampa Biome

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    Felipe Lorensini

    Full Text Available ABSTRACT Information on nitrogen fertilization in growing vines is still a very limited subject, especially for crops on sandy soils in the Pampa Biome in Rio Grande do Sul, where viticulture has expanded considerably in the last decade. This study aimed to assess the impact of N doses on growth of young plants of Chardonnay and Pinot Noir vines and N forms present in sandy soil in the Pampa Biome. The experiment was conducted from October 2011 to December 2012 in a vineyard in Santana do Livramento, in Southern Rio Grande do Sul State, in soil with 82 g kg-1 clay in the 0-20 cm layer. Vines of Chardonnay and Pinot Noir varieties were subjected to applications of 0, 10, 20, 40, 60, and 80 kg N ha-1 year-1. Total N in leaves, SPAD readings, stem diameter, plant height, and dry matter of the pruned material were evaluated in two growth cycles and three times. Soil samples were collected at 0-10 and 10-20 cm depths at four crop growth stages, in which N-NH4 +, N-NO3 -, and total N were analyzed and the mineral N was calculated. The N levels applied to young vines, although they did not provide relevant changes in the N-NH4 +, N-NO3 -, and mineral N contents in the soil, were able to increase the N content in the leaves, increasing plant vigor. because the reason is that there was an increase in stem diameter, plant height, and dry matter of pruned material in most evaluation periods. These parameters suggest better growth patterns and uniformity of young grapevines with possible positive effects in anticipation of production, demonstrating the importance of nitrogen fertilization strategies to the growing vines in the sandy soil conditions of the Pampa Biome.

  5. Remote Sensing of the Urban Heat Island Effect Across Biomes in the Continental USA

    Science.gov (United States)

    Imhoff, Marc L.; Zhang, Ping; Wolfe, Robert E.; Bounoua, Lahouari

    2010-01-01

    Impervious surface area (ISA) from the Landsat TM-based NLCD 2001 dataset and land surface temperature (LST) from MODIS averaged over three annual cycles (2003-2005) are used in a spatial analysis to assess the urban heat island (UHI) skin temperature amplitude and its relationship to development intensity, size, and ecological setting for 38 of the most populous cities in the continental United States. Development intensity zones based on %ISA are defined for each urban area emanating outward from the urban core to the nonurban rural areas nearby and used to stratify sampling for land surface temperatures and NDVI. Sampling is further constrained by biome and elevation to insure objective intercomparisons between zones and between cities in different biomes permitting the definition of hierarchically ordered zones that are consistent across urban areas in different ecological setting and across scales. We find that ecological context significantly influences the amplitude of summer daytime UHI (urban-rural temperature difference) the largest (8 C average) observed for cities built in biomes dominated by temperate broadleaf and mixed forest. For all cities combined, ISA is the primary driver for increase in temperature explaining 70% of the total variance in LST. On a yearly average, urban areas are substantially warmer than the non-urban fringe by 2.9 C, except for urban areas in biomes with arid and semiarid climates. The average amplitude of the UHI is remarkably asymmetric with a 4.3 C temperature difference in summer and only 1.3 C in winter. In desert environments, the LST's response to ISA presents an uncharacteristic "U-shaped" horizontal gradient decreasing from the urban core to the outskirts of the city and then increasing again in the suburban to the rural zones. UHI's calculated for these cities point to a possible heat sink effect. These observational results show that the urban heat island amplitude both increases with city size and is seasonally

  6. Candidatus Rickettsia andeanae, a spotted fever group agent infecting Amblyomma parvum ticks in two Brazilian biomes

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    Fernanda Aparecida Nieri-Bastos

    2014-04-01

    Full Text Available Adult ticks of the species Amblyomma parvum were collected from the vegetation in the Pantanal biome (state of Mato Grosso do Sul and from horses in the Cerrado biome (state of Piauí in Brazil. The ticks were individually tested for rickettsial infection via polymerase chain reaction (PCR targeting three rickettsial genes, gltA, ompA and ompB. Overall, 63.5% (40/63 and 66.7% (2/3 of A. parvum ticks from Pantanal and Cerrado, respectively, contained rickettsial DNA, which were all confirmed by DNA sequencing to be 100% identical to the corresponding fragments of the gltA, ompA and ompB genes of Candidatus Rickettsia andeanae. This report is the first to describe Ca. R. andeanae in Brazil.

  7. Candidatus Rickettsia andeanae, a spotted fever group agent infecting Amblyomma parvum ticks in two Brazilian biomes.

    Science.gov (United States)

    Nieri-Bastos, Fernanda Aparecida; Lopes, Marcos Gomes; Cançado, Paulo Henrique Duarte; Rossa, Giselle Ayres Razera; Faccini, João Luiz Horácio; Gennari, Solange Maria; Labruna, Marcelo Bahia

    2014-04-01

    Adult ticks of the species Amblyomma parvum were collected from the vegetation in the Pantanal biome (state of Mato Grosso do Sul) and from horses in the Cerrado biome (state of Piauí) in Brazil. The ticks were individually tested for rickettsial infection via polymerase chain reaction (PCR) targeting three rickettsial genes, gltA, ompA and ompB. Overall, 63.5% (40/63) and 66.7% (2/3) of A. parvum ticks from Pantanal and Cerrado, respectively, contained rickettsial DNA, which were all confirmed by DNA sequencing to be 100% identical to the corresponding fragments of the gltA, ompA and ompB genes of Candidatus Rickettsia andeanae. This report is the first to describe Ca. R. andeanae in Brazil.

  8. Deficiência nutricional em bastão-do-imperador (Etlingera elatior (Jack R. M. Smith: efeito na produção de matéria seca e índices biométricos Nutritional deficiency in torch ginger (Etlingera elatior (Jack R. M. Smith: effect on dry matter production and biometrical index

    Directory of Open Access Journals (Sweden)

    Jussara Ellen Morais Frazão

    2010-04-01

    Full Text Available Neste trabalho, objetivou-se avaliar os efeitos de omissões de nutrientes na produção de matéria seca e nos parâmetros de crescimento do bastão-do-imperador. O trabalho foi realizado em casa de vegetação da área experimental do Departamento de Ciência do Solo da Universidade Federal de Lavras (Lavras, MG, no período de janeiro de 2007 a janeiro de 2008. O delineamento experimental foi inteiramente casualizados com quatro repetições e oito tratamentos: Solução Hoagland & Arnon completa, soluções nutritivas com as omissões de N, de P, de K, de Ca, de Mg, de S e de B. Foram avaliadas a altura das plantas, diâmetro das hastes, número de hastes, número de folhas por hastes e volume da raiz. Posteriormente, as plantas foram divididas em folhas, hastes, rizoma e raiz para determinação da massa de matéria seca de cada parte. A omissão de nutrientes afetou os parâmetros de crescimento das plantas e a produção de matéria seca. Observou-se que o bastão-do-imperador mostrou-se mais exigente em B, K, N, P e S na fase inicial de crescimento do que em Ca e Mg. A redução da matéria seca total das plantas foi influenciada na seguinte ordem: B > K > N > P > S > Mg > Ca.The objective of this work was to evaluate the effect of simple and multiple nutrient omissions on the dry matter production and growth parameters of torch ginger plants. The experiment was carried out under greenhouse conditions at the Soil Science Department of Federal University of Lavras (Lavras-MG. The experiment was started in January 2007 and lasted for 12 months, following a completely randomized design, with four replicates and eight treatments: Complete Hoagland & Arnon nutrient solution, and nutrient solutions without N, P, K, Ca, Mg, S, and B. Plant height, stem diameter, number of stems, number of leaves per stem, and volume of root were evaluated. Subsequently the plants were divided into leaf + pseudostem, rhizome, root and tillers for dry matter

  9. Woodland expansion in South African grassy biomes based on satellite observations (1990-2013): general patterns and potential drivers.

    Science.gov (United States)

    Skowno, Andrew L; Thompson, Mark W; Hiestermann, Jens; Ripley, Brad; West, Adam G; Bond, William J

    2017-06-01

    Increases in woody plant cover in savanna grassland environments have been reported on globally for over 50 years and are generally perceived as a threat to rangeland productivity and biodiversity. Despite this, few attempts have been made to estimate the extent of woodland increase at a national scale, principally due to technical constraints such as availability of appropriate remote sensing products. In this study, we aimed to measure the extent to which woodlands have replaced grasslands in South Africa's grassy biomes. We use multiseason Landsat data in conjunction with satellite L-band radar backscatter data to estimate the extent of woodlands and grasslands in 1990 and 2013. The method employed allows for a unique, nationwide measurement of transitions between grassland and woodland classes in recent decades. We estimate that during the 23-year study period, woodlands have replaced grasslands over ~57 000 km 2 and conversely that grasslands have replaced woodlands over ~30 000 km 2 , a net increase in the extent of woodland of ~27 000 km 2 and an annual increase of 0.22%. The changes varied markedly across the country; areas receiving over 500 mm mean annual precipitation showed higher rates of woodland expansion than regions receiving 0.19% yr -1 ). The woodland change map presented here provides a unique opportunity to test the numerous models of woody plant encroachment at a national/regional scale. © 2016 John Wiley & Sons Ltd.

  10. Sensitivity of the Amazon biome to high resolution climate change projections

    OpenAIRE

    LYRA,Andre de Arruda; CHOU,Sin Chan; SAMPAIO,Gilvan de Oliveira

    2016-01-01

    ABSTRACT: Despite the reduction in deforestation rate in recent years, the impact of global warming by itself can cause changes in vegetation cover. The objective of this work was to investigate the possible changes on the major Brazilian biome, the Amazon Rainforest, under different climate change scenarios. The dynamic vegetation models may simulate changes in vegetation distribution and the biogeochemical processes due to climate change. Initially, the Inland dynamic vegetation model was f...

  11. Ceracis zarathustrai sp. nov. (Coleoptera: Ciidae) from the Atlantic Forest biome

    OpenAIRE

    Pecci-Maddalena,Ítalo S.C.; Sandoval-Gómez,Vivian Eliana; Lopes-Andrade,Cristiano

    2014-01-01

    Ceracis Mellié, 1849 is the second most speciose genus of Ciidae, with 51 described species. Here we describe Ceracis zarathustrai sp. nov. based on adult individuals collected in three remnants of the Atlantic Forest biome (states of Minas Gerais and Espírito Santo). We provide information on its host fungi and briefly discuss the morphological affinities with other species of the genus.

  12. Ceracis zarathustrai sp. nov. (Coleoptera: Ciidae from the Atlantic Forest biome

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    Ítalo S.C. Pecci-Maddalena

    2014-10-01

    Full Text Available Ceracis Mellié, 1849 is the second most speciose genus of Ciidae, with 51 described species. Here we describe Ceracis zarathustrai sp. nov. based on adult individuals collected in three remnants of the Atlantic Forest biome (states of Minas Gerais and Espírito Santo. We provide information on its host fungi and briefly discuss the morphological affinities with other species of the genus.

  13. A brief botanical survey into Kumbira forest, an isolated patch of Guineo-Congolian biome

    OpenAIRE

    Gon?alves, Francisco M. P.; Goyder, David J.

    2016-01-01

    Abstract Kumbira forest is a discrete patch of moist forest of Guineo-Congolian biome in Western Angola central scarp and runs through Cuanza Norte and Cuanza Sul province. The project aimed to document the floristic diversity of the Angolan escarpment, a combination of general walk-over survey, plant specimen collection and sight observation was used to aid the characterization of the vegetation. Over 100 plant specimens in flower or fruit were collected within four identified vegetation typ...

  14. Fishes from Parque Estadual de Itapeva, Rio Grande do Sul state, Atlantic Forest biome, Brazil

    OpenAIRE

    Azevedo, Marco; Bertaco, Vinicius

    2016-01-01

    The ichthyofauna herein presented was collected in streams, lake, and swamps from the Parque Estadual de Itapeva, Rio Mampituba basin. The protected area is located in the northernmost part of the coastal plain of Rio Grande do Sul state. Samplings resulted in 26 species, in 20 genera, 15 families, and six orders. Two species are listed as threatened and one near threatened in Rio Grande do Sul. This study represents the first fish survey in the protected area, Atlantic Forest biome.

  15. SOIL COVER AND CHEMICAL AND PHYSICAL ATTRIBUTES IN OXISOL IN THE ATLANTIC FOREST BIOME

    OpenAIRE

    Ana Paula Almeida Bertossi; Paulo Roberto da Rocha Júnior; Paulo Henrique Ribeiro; João Paulo Cunha de Menezes; Roberto Avelino Cecílio; Felipe Vaz Andrade

    2016-01-01

    ABSTRACT The objective of this study was to evaluate the chemical and physical attributes of different soil cover in a Oxisol with a strong wavy relief in the Atlantic Forest Biome, in which were selected three watersheds, employed with grazing (watershed P), forest (watershed M) and coffee (watershed C). Deformed and not deformed samples were collected in three depths for physical and chemical characterization. The chemical characteristics of soil in different watershed studies presented low...

  16. Direct environmental impacts of solar power in two arid biomes: An initial investigation

    OpenAIRE

    Justine Rudman; Paul Gauch; Karen J. Esler

    2017-01-01

    According to recent national energy plans and policy documents, the number of renewable energy developments is expected to increase in South Africa, thus contributing to the diversification of the country’s energy system. Consequently, numerous solar power developments are being deployed in the sunny arid interior – areas generally represented by the Nama-Karoo and Savanna Biomes. These developments come with a range of novel environmental impacts, providing opportunities for multidimensional...

  17. Genetic diversity of bats coronaviruses in the Atlantic Forest hotspot biome, Brazil.

    Science.gov (United States)

    Góes, Luiz Gustavo Bentim; Campos, Angélica Cristine de Almeida; Carvalho, Cristiano de; Ambar, Guilherme; Queiroz, Luzia Helena; Cruz-Neto, Ariovaldo Pereira; Munir, Muhammad; Durigon, Edison Luiz

    2016-10-01

    Bats are notorious reservoirs of genetically-diverse and high-profile pathogens, and are playing crucial roles in the emergence and re-emergence of viruses, both in human and in animals. In this report, we identified and characterized previously unknown and diverse genetic clusters of bat coronaviruses in the Atlantic Forest Biome, Brazil. These results highlight the virus richness of bats and their possible roles in the public health. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. The deforestation story: testing for anthropogenic origins of Africa's flammable grassy biomes

    OpenAIRE

    Bond, William; Zaloumis, Nicholas P.

    2016-01-01

    Africa has the most extensive C4 grassy biomes of any continent. They are highly flammable accounting for greater than 70% of the world's burnt area. Much of Africa's savannas and grasslands occur in climates warm enough and wet enough to support closed forests. The combination of open grassy systems and the frequent fires they support have long been interpreted as anthropogenic artefacts caused by humans igniting frequent fires. True grasslands, it was believed, would be restricted to climat...

  19. Aura-biomes are present in the water layer above coral reef benthic macro-organisms

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    Kevin Walsh

    2017-08-01

    Full Text Available As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1 the coral Mussismilia braziliensis, (2 fleshy macroalgae (Stypopodium, Dictota and Canistrocarpus, (3 turf algae, and (4 the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific “aura-biome”. The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria, Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

  20. Ecological consequences of the expansion of N₂-fixing plants in cold biomes.

    Science.gov (United States)

    Hiltbrunner, Erika; Aerts, Rien; Bühlmann, Tobias; Huss-Danell, Kerstin; Magnusson, Borgthor; Myrold, David D; Reed, Sasha C; Sigurdsson, Bjarni D; Körner, Christian

    2014-09-01

    Research in warm-climate biomes has shown that invasion by symbiotic dinitrogen (N2)-fixing plants can transform ecosystems in ways analogous to the transformations observed as a consequence of anthropogenic, atmospheric nitrogen (N) deposition: declines in biodiversity, soil acidification, and alterations to carbon and nutrient cycling, including increased N losses through nitrate leaching and emissions of the powerful greenhouse gas nitrous oxide (N2O). Here, we used literature review and case study approaches to assess the evidence for similar transformations in cold-climate ecosystems of the boreal, subarctic and upper montane-temperate life zones. Our assessment focuses on the plant genera Lupinus and Alnus, which have become invasive largely as a consequence of deliberate introductions and/or reduced land management. These cold biomes are commonly located in remote areas with low anthropogenic N inputs, and the environmental impacts of N2-fixer invasion appear to be as severe as those from anthropogenic N deposition in highly N polluted areas. Hence, inputs of N from N2 fixation can affect ecosystems as dramatically or even more strongly than N inputs from atmospheric deposition, and biomes in cold climates represent no exception with regard to the risk of being invaded by N2-fixing species. In particular, the cold biomes studied here show both a strong potential to be transformed by N2-fixing plants and a rapid subsequent saturation in the ecosystem's capacity to retain N. Therefore, analogous to increases in N deposition, N2-fixing plant invasions must be deemed significant threats to biodiversity and to environmental quality.

  1. Ecological consequences of the expansion of N2-fixing plants in cold biomes

    Science.gov (United States)

    Hiltbrunner, Erika; Aerts, Rien; Bühlmann, Tobias; Huss-Danell, Kerstin; Magnusson, Borgthor; Myrold, David D.; Reed, Sasha C.; Sigurdsson, Bjarni D.; Körner, Christian

    2014-01-01

    Research in warm-climate biomes has shown that invasion by symbiotic dinitrogen (N2)-fixing plants can transform ecosystems in ways analogous to the transformations observed as a consequence of anthropogenic, atmospheric nitrogen (N) deposition: declines in biodiversity, soil acidification, and alterations to carbon and nutrient cycling, including increased N losses through nitrate leaching and emissions of the powerful greenhouse gas nitrous oxide (N2O). Here, we used literature review and case study approaches to assess the evidence for similar transformations in cold-climate ecosystems of the boreal, subarctic and upper montane-temperate life zones. Our assessment focuses on the plant genera Lupinus and Alnus, which have become invasive largely as a consequence of deliberate introductions and/or reduced land management. These cold biomes are commonly located in remote areas with low anthropogenic N inputs, and the environmental impacts of N2-fixer invasion appear to be as severe as those from anthropogenic N deposition in highly N polluted areas. Hence, inputs of N from N2 fixation can affect ecosystems as dramatically or even more strongly than N inputs from atmospheric deposition, and biomes in cold climates represent no exception with regard to the risk of being invaded by N2-fixing species. In particular, the cold biomes studied here show both a strong potential to be transformed by N2-fixing plants and a rapid subsequent saturation in the ecosystem’s capacity to retain N. Therefore, analogous to increases in N deposition, N2-fixing plant invasions must be deemed significant threats to biodiversity and to environmental quality.

  2. BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities.

    OpenAIRE

    Mahdi Shafiei; Katherine A Dunn; Hugh Chipman; Hong Gu; Joseph P Bielawski

    2014-01-01

    Metagenomics yields enormous numbers of microbial sequences that can be assigned a metabolic function. Using such data to infer community-level metabolic divergence is hindered by the lack of a suitable statistical framework. Here, we describe a novel hierarchical Bayesian model, called BiomeNet (Bayesian inference of metabolic networks), for inferring differential prevalence of metabolic subnetworks among microbial communities. To infer the structure of community-level metabolic interactions...

  3. Central African biomes and forest succession stages derived from modern pollen data and plant functional types

    OpenAIRE

    J. Lebamba; A. Ngomanda; A. Vincens; D. Jolly; C. Favier; H. Elenga; I. Bentaleb

    2009-01-01

    New detailed vegetation reconstructions are proposed in Atlantic Central Africa from a modern pollen data set derived from 199 sites (Cameroon, Gabon and Congo) including 131 new sites. In this study, the concept of plant functional classification is improved with new and more detailed plant functional types (PFTs) and new aggregations of pollen taxa. Using the biomisation method, we reconstructed (1) modern potential biomes and (2) potential succession stages of forest regeneration, a new ap...

  4. A global change-induced biome shift in the Montseny mountains (NE Spain)

    OpenAIRE

    Peñuelas, Josep

    2003-01-01

    Shifts in plant species and biome distribution in response to warming have been described in past climate changes. However, reported evidence of such shifts under current climate change is still scarce. By comparing current and 1945 vegetation distribution in the Montseny mountains (Catalonia, NE Spain), we report here a progressive replacement of cold-temperate ecosystems by Mediterranean ecosystems. Beech (Fagus sylvatica) forest has shifted altitudinally upwards by ca. 70 m at the highest ...

  5. The Economics of Root Distributions of Terrestrial Biomes in Response to Elevated CO2

    Science.gov (United States)

    Lu, M.; Hedin, L. O. O.

    2017-12-01

    Belowground root distributions of terrestrial biomes are central to understanding soil biogeochemical processes and land carbon sink. Yet models are thus far not able to predict root distributions across plant functional groups and major biomes, limiting our ability to predict the response of land systems to elevated CO2 concentration. Of particular concern is the apparent lack of stimulation of the aboveground carbon sink despite 30% increase of atmospheric CO2 over the past half-century, and despite the clear acceleration of the land carbon sink over the same period. This apparent discrepancy in land ecosystem response has led to the proposition that changes in belowground root dynamics might be responsible for the overlooked land sink. We here present a new modeling approach for predicting the response of root biomass and soil carbon storage to increased CO2. Our approach considers the first-principle mechanisms and tradeoffs by which plants and plant roots invest carbon to gain belowground resources, in collaboration with distinct root symbioses. We allow plants to locally compete for nutrients, with the ability to allocate biomass at different depths in the soil profile. We parameterized our model using an unprecedented global dataset of root traits, and validated our biome-level predictions with a recently updated global root biomass database. Our results support the idea that plants "dig deeper" when exposed to increased CO2, and we offer an economic-based mechanism for predicting the plant root response across soil conditions, plant functional groups and major biomes. Our model also recreates the observed responses across a range of free-air CO2 enrichment experiments, including a distinct response between plants associated with ectomycorrhizal and arbuscular mycorrhizal fungi. Most broadly, our findings suggest that roots may be increasingly important in the land carbon sink, and call for a greater effort to quantify belowground responses to elevated

  6. Fabricación y propiedades del carburo de silicio biomórfico: maderas cerámicas

    Directory of Open Access Journals (Sweden)

    Varela Feria, F. M.

    2002-08-01

    Full Text Available There is an increasing interest in the fabrication of materials with biomorphic microstructure. In particular, the fabrication of biomorphic ceramics would be of high interest because its high-temperature structural applications. The ceramics presented in this research were fabricated by the pyrolysis and infiltration with molten silicon of wood preforms. The final product is SiC with the same microstructure of the wood precursor. Wood is a natural composite that present an anisotropic porous microstructure with excellent elasticity, strength, and damage tolerance. Some of this properties will remain improved in the ceramic product. Biomorphic ceramics reach high strengths (700 MPa at 1150 oC for biomorphic SiC made from eucalyptus wood. The influence of the wood precursor and fabrication process in the mechanical and microstructural properties has been studied. The correlation microstructure-mechanical properties is discussed, as well as the application of the cellular theory of solids.

    En los últimos años se ha puesto de manifiesto un considerable interés en la fabricación y optimización de materiales de microestructura biomórfica. En particular, la fabricación de cerámicas biomórficas es especialmente importante ya que éstas pueden ser utilizadas en aplicaciones estructurales a temperaturas elevadas. Los materiales objeto de esta investigación se fabrican mediante la pirólisis e infiltración de silicio fundido en preformas de madera. El resultado final es SiC con la misma microestructura que la madera precursora. La madera es un material natural compuesto que presenta una morfología porosa anisotrópica con una excelente elasticidad, resistencia y tolerancia al daño; algunas de estas propiedades se trasladarán y amplificarán al pasar a la cerámica que se elabora a partir de la misma. Se ha estudiado la influencia de la madera seleccionada y el proceso de fabricación en las propiedades mecánicas y microestructurales

  7. Beyond the climate envelope: using trait filtering models to predict biome boundaries from plant physiology.

    Science.gov (United States)

    Fisher, R.; Hoffmann, W. A.; Muszala, S.

    2014-12-01

    The introduction of second-generation dynamic vegetation models - which simulate the distribution of light resources between plant types along the vertical canopy profile, and therefore facilitate the representation of plant competition explicitly - is a large increase in the complexity and fidelity with which the terrestrial biosphere is abstracted into Earth System Models. In this new class of model, biome boundaries are predicted as the emergent properties of plant physiology, and are therefore sensitive to the high-dimensional parameterizations of plant functional traits. These new approaches offer the facility to quantitatively test ecophysiological hypotheses of plant distribution at large scales, a field which remains surprisingly under-developed. Here we describe experiments conducted with the Community Land Model Ecosystem Demography component, CLM(ED), in which we reduce the complexity of the problem by testing how individual plant functional trait changes to control the location of biome boundaries between functional types. Specifically, we investigate which physiological trade-offs determine the boundary between frequently burned savanna and forest biomes, and attempt to distinguish how each strategic life-history trade-off (carbon storage, bark investment, re-sprouting strategy) contributes towards the maintenance of sharp geographical gradients between fire adapted and typically inflammable closed canopy ecosystems. This study forms part of the planning for a model-inspired fire manipulation experiment at the cerrado-forest boundary in South-Eastern Brazil, and the results will be used to guide future data-collection and analysis strategies.

  8. Federal Conservation Units in Brazil: The Situation of Biomes and Regions

    Directory of Open Access Journals (Sweden)

    Eduardo Pacca Luna Mattar

    2018-03-01

    Full Text Available ABSTRACT Federal conservation units (FCU are areas legally established by the government, in order to meet the needs of protection and sustainable exploitation of biodiversity. A way to ensure the efficiency of public management is to systematize data. Therefore, the present study grouped and analyzed public data about FCU. Brazil has 309 federal conservation units, which represent 9.06% of the national territory and 45305 residents households. The Northern Region covers 84.80% of these families and 79.20% of its area belongs to FCU. The Amazônia biome has 14.57% of its territory occupied by FCU; on the other hand, Pantanal has only 0.98% of its area protected. There is a higher concentration of public agents in the FCU of the Southeastern region and in the Mata Atlântica biome. The analysis of this information reveals significant differences between the biomes and the federation units, a fact that reflects the importance of the organization of public data.

  9. Diversity and molecular characterization of novel hemoplasmas infecting wild rodents from different Brazilian biomes.

    Science.gov (United States)

    Gonçalves, Luiz Ricardo; Roque, André Luiz Rodrigues; Matos, Carlos Antonio; Fernandes, Simone de Jesus; Olmos, Isabella Delamain Fernandez; Machado, Rosangela Zacarias; André, Marcos Rogério

    2015-12-01

    Although hemoplasma infection in domestic animals has been well documented, little is known about the prevalence and genetic diversity of these bacteria in wild rodents. The present work aimed to investigate the occurrence of hemotrophic mycoplasmas in wild rodents from five Brazilian biomes, assessing the 16S rRNA phylogenetic position of hemoplasma species by molecular approach. Spleen tissues were obtained from 500 rodents, comprising 52 different rodent species trapped between 2000 and 2011. DNA samples were submitted to previously described PCR protocols for amplifying Mycoplasma spp. based on 16S rRNA, followed by sequencing and phylogenetic inferences. Among 457 rodent spleen samples showing absence of inhibitors, 100 (21.9%) were PCR positive to Mycoplasma spp. The occurrence of hemotropic mycoplasmas among all sampled rodents was demonstrated in all five biomes and ranged from 9.3% (7/75) to 26.2% (38/145). The Blastn analysis showed that amplified sequences had a percentage of identity ranging from 86 to 99% with other murine hemoplasmas. The ML phylogenetic analysis of 16S rRNA gene of 24 positive randomly selected samples showed the presence of ten distinct groups, all clustering within the Mycoplasma haemofelis. The phylogenetic assessment suggests the circulation of novel hemoplasma species in rodents from different biomes in Brazil. Copyright © 2015 Elsevier Ltd. All rights reserved.

  10. Global negative vegetation feedback to climate warming responses of leaf litter decomposition rates in cold biomes.

    Science.gov (United States)

    Cornelissen, Johannes H C; van Bodegom, Peter M; Aerts, Rien; Callaghan, Terry V; van Logtestijn, Richard S P; Alatalo, Juha; Chapin, F Stuart; Gerdol, Renato; Gudmundsson, Jon; Gwynn-Jones, Dylan; Hartley, Anne E; Hik, David S; Hofgaard, Annika; Jónsdóttir, Ingibjörg S; Karlsson, Staffan; Klein, Julia A; Laundre, Jim; Magnusson, Borgthor; Michelsen, Anders; Molau, Ulf; Onipchenko, Vladimir G; Quested, Helen M; Sandvik, Sylvi M; Schmidt, Inger K; Shaver, Gus R; Solheim, Bjørn; Soudzilovskaia, Nadejda A; Stenström, Anna; Tolvanen, Anne; Totland, Ørjan; Wada, Naoya; Welker, Jeffrey M; Zhao, Xinquan

    2007-07-01

    Whether climate change will turn cold biomes from large long-term carbon sinks into sources is hotly debated because of the great potential for ecosystem-mediated feedbacks to global climate. Critical are the direction, magnitude and generality of climate responses of plant litter decomposition. Here, we present the first quantitative analysis of the major climate-change-related drivers of litter decomposition rates in cold northern biomes worldwide. Leaf litters collected from the predominant species in 33 global change manipulation experiments in circum-arctic-alpine ecosystems were incubated simultaneously in two contrasting arctic life zones. We demonstrate that longer-term, large-scale changes to leaf litter decomposition will be driven primarily by both direct warming effects and concomitant shifts in plant growth form composition, with a much smaller role for changes in litter quality within species. Specifically, the ongoing warming-induced expansion of shrubs with recalcitrant leaf litter across cold biomes would constitute a negative feedback to global warming. Depending on the strength of other (previously reported) positive feedbacks of shrub expansion on soil carbon turnover, this may partly counteract direct warming enhancement of litter decomposition.

  11. Convergence in the temperature response of leaf respiration across biomes and plant functional types.

    Science.gov (United States)

    Heskel, Mary A; O'Sullivan, Odhran S; Reich, Peter B; Tjoelker, Mark G; Weerasinghe, Lasantha K; Penillard, Aurore; Egerton, John J G; Creek, Danielle; Bloomfield, Keith J; Xiang, Jen; Sinca, Felipe; Stangl, Zsofia R; Martinez-de la Torre, Alberto; Griffin, Kevin L; Huntingford, Chris; Hurry, Vaughan; Meir, Patrick; Turnbull, Matthew H; Atkin, Owen K

    2016-04-05

    Plant respiration constitutes a massive carbon flux to the atmosphere, and a major control on the evolution of the global carbon cycle. It therefore has the potential to modulate levels of climate change due to the human burning of fossil fuels. Neither current physiological nor terrestrial biosphere models adequately describe its short-term temperature response, and even minor differences in the shape of the response curve can significantly impact estimates of ecosystem carbon release and/or storage. Given this, it is critical to establish whether there are predictable patterns in the shape of the respiration-temperature response curve, and thus in the intrinsic temperature sensitivity of respiration across the globe. Analyzing measurements in a comprehensive database for 231 species spanning 7 biomes, we demonstrate that temperature-dependent increases in leaf respiration do not follow a commonly used exponential function. Instead, we find a decelerating function as leaves warm, reflecting a declining sensitivity to higher temperatures that is remarkably uniform across all biomes and plant functional types. Such convergence in the temperature sensitivity of leaf respiration suggests that there are universally applicable controls on the temperature response of plant energy metabolism, such that a single new function can predict the temperature dependence of leaf respiration for global vegetation. This simple function enables straightforward description of plant respiration in the land-surface components of coupled earth system models. Our cross-biome analyses shows significant implications for such fluxes in cold climates, generally projecting lower values compared with previous estimates.

  12. Convergence in the temperature response of leaf respiration across biomes and plant functional types

    Science.gov (United States)

    Heskel, Mary A.; O’Sullivan, Odhran S.; Reich, Peter B.; Tjoelker, Mark G.; Weerasinghe, Lasantha K.; Penillard, Aurore; Egerton, John J. G.; Creek, Danielle; Bloomfield, Keith J.; Xiang, Jen; Sinca, Felipe; Stangl, Zsofia R.; Martinez-de la Torre, Alberto; Griffin, Kevin L.; Huntingford, Chris; Hurry, Vaughan; Meir, Patrick; Turnbull, Matthew H.; Atkin, Owen K.

    2016-01-01

    Plant respiration constitutes a massive carbon flux to the atmosphere, and a major control on the evolution of the global carbon cycle. It therefore has the potential to modulate levels of climate change due to the human burning of fossil fuels. Neither current physiological nor terrestrial biosphere models adequately describe its short-term temperature response, and even minor differences in the shape of the response curve can significantly impact estimates of ecosystem carbon release and/or storage. Given this, it is critical to establish whether there are predictable patterns in the shape of the respiration–temperature response curve, and thus in the intrinsic temperature sensitivity of respiration across the globe. Analyzing measurements in a comprehensive database for 231 species spanning 7 biomes, we demonstrate that temperature-dependent increases in leaf respiration do not follow a commonly used exponential function. Instead, we find a decelerating function as leaves warm, reflecting a declining sensitivity to higher temperatures that is remarkably uniform across all biomes and plant functional types. Such convergence in the temperature sensitivity of leaf respiration suggests that there are universally applicable controls on the temperature response of plant energy metabolism, such that a single new function can predict the temperature dependence of leaf respiration for global vegetation. This simple function enables straightforward description of plant respiration in the land-surface components of coupled earth system models. Our cross-biome analyses shows significant implications for such fluxes in cold climates, generally projecting lower values compared with previous estimates. PMID:27001849

  13. Modelling the carbon budget of intensive forest monitoring sites in Germany using the simulation model BIOME-BGC

    OpenAIRE

    Jochheim, H.; Puhlmann, M.; Beese, F.; Berthold, D.; Einert, P.; Kallweit, R.; Konopatzky, A.; Meesenburg, H.; Meiwes, K.-J.; Raspe, S.; Schulte-Bisping, H.; Schulz, C.

    2008-01-01

    It is shown that by calibrating the simulation model BIOME-BGC with mandatory and optional Level II data, within the ICP Forest programme, a well-founded calculation of the carbon budget of forest stands is achievable and, based on succeeded calibration, the modified BIOME-BGC model is a useful tool to assess the effect of climate change on forest ecosystems. peerReviewed

  14. ANTIBACTERIAL POTENTIAL OF NATIVE PLANTS FROM THE CAATINGA BIOME AGAINST Staphylococcus spp. ISOLATES FROM SMALL RUMINANTS WITH MASTITIS

    OpenAIRE

    PEIXOTO, RODOLFO DE MORAES; SILVA, WELLINGTON ERASMO LIMA E; ALMEIDA, JACKSON ROBERTO GUEDES SILVA; BRANCO, ALEXSANDRO; COSTA, MATEUS MATIUZZI DA

    2016-01-01

    ABSTRACT The aim of the present study is to assess the antibacterial potential of plants from the Caatinga biome of the semi-arid region of Pernambuco, against Staphylococcus spp. isolates from cases of subclinical mastitis in small ruminants, such as goats and ewes. Ethanolic extracts of the following plants from the Caatinga biome were used: Encholirium spectabile Mart., Bromelia laciniosa Mart., Neoglaziovia variegata Mez., Amburana cearensis (Fr. Allem.) A. C. Smith, Hymenaea martiana Hay...

  15. Biophysical Properties of Cultivated Pastures in the Brazilian Savanna Biome: An Analysis in the Spatial-Temporal Domains Based on Ground and Satellite Data

    Directory of Open Access Journals (Sweden)

    Fernando M. Araújo

    2013-01-01

    Full Text Available Brazil has the largest commercial beef cattle herd in the world, with cattle ranching being particularly prominent in the 200-million ha, Brazilian neotropical moist savanna biome, known as Cerrado, one of the world’s hotspots for biodiversity conservation. As decreasing productivity is a major concern affecting the Cerrado pasturelands, evaluation of pasture conditions through the determination of biophysical parameters is instrumental for more effective management practices and herd occupation strategies. Within this context, the primary goal of this study was the regional assessment of pasture biophysical properties, through the scaling of wet- and dry-season ground truth data (total biomass, green biomass, and % green cover via the combined use of high (Landsat-TM and moderate (MODIS spatial resolution vegetation index images. Based on the high correlation found between NDVI (normalized difference vegetation index and % green cover (r = 0.95, monthly MODIS-based % green cover images were derived for the 2009–2010 hydrological cycle, which were able to capture major regional patterns and differences in pasture biophysical responses, including the increasing greenness values towards the southern portions of the biome, due to both local conditions (e.g., more fertile soils and management practices. These results corroborate the development of biophysically-based landscape degradation indices, in support of improved land use governance and natural area conservation in the Cerrado.

  16. Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years

    Science.gov (United States)

    Marchant, R.; Harrison, S. P.; Hooghiemstra, H.; Markgraf, V.; van Boxel, J. H.; Ager, T.; Almeida, L.; Anderson, R.; Baied, C.; Behling, H.; Berrio, J. C.; Burbridge, R.; Björck, S.; Byrne, R.; Bush, M. B.; Cleef, A. M.; Duivenvoorden, J. F.; Flenley, J. R.; de Oliveira, P.; van Geel, B.; Graf, K. J.; Gosling, W. D.; Harbele, S.; van der Hammen, T.; Hansen, B. C. S.; Horn, S. P.; Islebe, G. A.; Kuhry, P.; Ledru, M.-P.; Mayle, F. E.; Leyden, B. W.; Lozano-García, S.; Melief, A. B. M.; Moreno, P.; Moar, N. T.; Prieto, A.; van Reenen, G. B.; Salgado-Labouriau, M. L.; Schäbitz, F.; Schreve-Brinkman, E. J.; Wille, M.

    2009-02-01

    The biomisation method is used to reconstruct Latin American vegetation at 6000±500 and 18 000±1000 radiocarbon years before present (14C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000±500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000±500 14C yr BP reconstruction are comparatively small. Patterns of change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America also show a change in biome assignment to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucatán peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000±1000 14C yr BP 61 samples from 34 sites record vegetation that reflects a generally cool and dry environment. Cool grass/shrubland prevalent in southeast Brazil, Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate

  17. Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years

    Science.gov (United States)

    Marchant, R.; Harrison, S.P.; Hooghiemstra, H.; Markgraf, Vera; Van Boxel, J. H.; Ager, T.; Almeida, L.; Anderson, R.; Baied, C.; Behling, H.; Berrio, J.C.; Burbridge, R.; Bjorck, S.; Byrne, R.; Bush, M.B.; Cleef, A.M.; Duivenvoorden, J.F.; Flenley, J.R.; De Oliveira, P.; Van Geel, B.; Graf, K.J.; Gosling, W.D.; Harbele, S.; Van Der Hammen, T.; Hansen, B.C.S.; Horn, S.P.; Islebe, G.A.; Kuhry, P.; Ledru, M.-P.; Mayle, F.E.; Leyden, B.W.; Lozano-Garcia, S.; Melief, A.B.M.; Moreno, P.; Moar, N.T.; Prieto, A.; Van Reenen, G. B.; Salgado-Labouriau, M. L.; Schasignbitz, F.; Schreve-Brinkman, E. J.; Wille, M.

    2009-01-01

    The biomisation method is used to reconstruct Latin American vegetation at 6000±500 and 18 000±1000 radiocarbon years before present (14C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000±500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000±500 14C yr BP reconstruction are comparatively small. Patterns of change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America also show a change in biome assignment to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucat??n peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000±1000 14C yr BP 61 samples from 34 sites record vegetation that reflects a generally cool and dry environment. Cool grass/shrubland prevalent in southeast Brazil, Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate

  18. Microestructura y propiedades mecánicas del SiC biomórfico obtenido a partir de eucalipto

    Directory of Open Access Journals (Sweden)

    Presas, M.

    2005-12-01

    Full Text Available The development of cellular ceramics with a biological structure, like bones and wood, has been a matter of interest in recent years. A low density highly interconnected structure, perfected by evolution, rises as the principal advantage of these materials. In the case of biomimetic SiC (biomorphic SiC, or bioSiC, the fabrication process technique is quite simple: a piece of wood is pyrolysed and is infiltrated with molten silicon after, the final product is a composite Si/SiC, which replicates the wood anisotropic microstructure This work focus on the mechanical properties of bioSiC fabricated using eucalyptus wood as precursor (hard wood with a bimodal channel distribution. It has been studied the mechanical behavior of this bioSiC (compression strength, flexure strength, fracture toughness and elastic modulus between 25 and 1350 oC. It is also discussed the relationship between mechanical behavior of the material and its microstructure.

    El desarrollo de materiales cerámicos con una estructura de tipo celular, similar a la del hueso o la madera, ha sido una cuestión que ha suscitado un gran interés en los últimos años. Su atractivo se debe al hecho de poseer una estructura porosa altamente interconectada de baja densidad, perfeccionada por la evolución. En el caso del SiC biomórfico (bio-SiC el proceso de fabricación es sencillo: se piroliza una pieza de madera y a continuación se inyecta con silicio líquido, el material así obtenido es un compuesto Si/SiC en el que el SiC mimetiza la estructura de la madera original. En este trabajo se estudian las propiedades mecánicas del SiC biomórfico fabricado a partir de eucalipto (madera dura con una distribución bimodal de poros. Se ha estudiado el comportamiento mecánico del mismo (resistencia a compresión, resistencia a flexión, tenacidad de fractura y módulo de elasticidad entre 25 y 1350 oC. Asimismo, se discute la relación entre el comportamiento mecánico del material y

  19. NPP Multi-Biome: Production and Mortality for Eastern US Forests, 1962-1996, R1

    Data.gov (United States)

    National Aeronautics and Space Administration — There are two data files (tab-delimited .txt format) with this data set that provide estimates of above-ground biomass per county; county-level annual above-ground...

  20. Effect of climate change, CO2 trends, nitrogen addition, and land-cover and management intensity changes on the carbon balance of European grasslands.

    Science.gov (United States)

    Chang, Jinfeng; Ciais, Philippe; Viovy, Nicolas; Vuichard, Nicolas; Herrero, Mario; Havlík, Petr; Wang, Xuhui; Sultan, Benjamin; Soussana, Jean-François

    2016-01-01

    Several lines of evidence point to European managed grassland ecosystems being a sink of carbon. In this study, we apply ORCHIDEE-GM a process-based carbon cycle model that describes specific management practices of pastures and the dynamics of carbon cycling in response to changes in climatic and biogeochemical drivers. The model is used to simulate changes in the carbon balance [i.e., net biome production (NBP)] of European grasslands over 1991-2010 on a 25 km × 25 km grid. The modeled average trend in NBP is 1.8-2.0 g C m(-2)  yr(-2) during the past two decades. Attribution of this trend suggests management intensity as the dominant driver explaining NBP trends in the model (36-43% of the trend due to all drivers). A major change in grassland management intensity has occurred across Europe resulting from reduced livestock numbers. This change has 'inadvertently' enhanced soil C sequestration and reduced N2 O and CH4 emissions by 1.2-1.5 Gt CO2 -equivalent, offsetting more than 7% of greenhouse gas emissions in the whole European agricultural sector during the period 1991-2010. Land-cover change, climate change and rising CO2 also make positive and moderate contributions to the NBP trend (between 24% and 31% of the trend due to all drivers). Changes in nitrogen addition (including fertilization and atmospheric deposition) are found to have only marginal net effect on NBP trends. However, this may not reflect reality because our model has only a very simple parameterization of nitrogen effects on photosynthesis. The sum of NBP trends from each driver is larger than the trend obtained when all drivers are varied together, leaving a residual - nonattributed - term (22-26% of the trend due to all drivers) indicating negative interactions between drivers. © 2015 John Wiley & Sons Ltd.

  1. Soil quality in anthropized ecosystem located in two biomes in Campinas city / SP-Brazil

    Science.gov (United States)

    Márcia Longo, Regina; Corcovia, Marina; Gomes, Raissa Caroline; Bettine, Sueli C.; Demamboro, Antonio Carlos; Fengler, Felipe H.; Irio Ribeiro, Admilson

    2017-04-01

    The rapid growth of large urban centers and the expansion of agricultural activities promote direct pressures on natural ecosystems. These actions have led to constant discussions by researchers and society as a whole in relation to preservation and quality of terrestrial ecosystems, and soil and vegetation components of vital importance to maintain these. In this context, the present study was to evaluate the anthropogenic interferences on soil properties in areas in two forest fragments located in the remaining urban areas in different biomes of Campinas-SP , Brazil. Both have their edges significantly disturbed by the proximity to urban centers , highways, sugarcane cultivation, among others. The remnant of the Atlantic Forest has an area of 250.36 ha is found in a so called protected area of ecological interest (A.R.I.E). This site access is restricted and has conservation measures, but is near major highways. The remnant of savanna has an approximate area of 40 ha there and has no conservation measure, finding it quite degraded. The physical properties and chemical soil in the two situations were collected throughout the border area totaling 28 points in the remaining savanna and 40 in the Atlantic Forest. The results were analyzed using Principal Component Analysis (PCA) to determine the main soil properties that reflect the quality of the ecosystems studied. It can be seen that most of the physical-chemical soil parameters were impacted in some way related to each other and in two ecosystems that is, the size of the vectors and the distance between them are studied in corresponding situations. The bulk density parameter has different behavior between the two biomes, since the particle density is presented close to each other but have different vector sizes. Some of the parameters have been identified with strong relationship between biomes: the Exchange Capacity Cationic (ECC) and the amounts of copper (Cu) by its close proximity of the vectors and the

  2. Identification of priority conservation areas and potential corridors for jaguars in the Caatinga biome, Brazil.

    Directory of Open Access Journals (Sweden)

    Ronaldo Gonçalves Morato

    Full Text Available The jaguar, Panthera onca, is a top predator with the extant population found within the Brazilian Caatinga biome now known to be on the brink of extinction. Designing new conservation units and potential corridors are therefore crucial for the long-term survival of the species within the Caatinga biome. Thus, our aims were: 1 to recognize suitable areas for jaguar occurrence, 2 to delineate areas for jaguar conservation (PJCUs, 3 to design corridors among priority areas, and 4 to prioritize PJCUs. A total of 62 points records of jaguar occurrence and 10 potential predictors were analyzed in a GIS environment. A predictive distributional map was obtained using Species Distribution Modeling (SDM as performed by the Maximum Entropy (Maxent algorithm. Areas equal to or higher than the median suitability value of 0.595 were selected as of high suitability for jaguar occurrence and named as Priority Jaguar Conservation Units (PJCU. Ten PJCUs with sizes varying from 23.6 km2 to 4,311.0 km2 were identified. Afterwards, we combined the response curve, as generated by SDM, and expert opinions to create a permeability matrix and to identify least cost corridors and buffer zones between each PJCU pair. Connectivity corridors and buffer zone for jaguar movement included an area of 8.884,26 km2 and the total corridor length is about 160.94 km. Prioritizing criteria indicated the PJCU representing c.a. 68.61% of the total PJCU area (PJCU # 1 as of high priority for conservation and connectivity with others PJCUs (PJCUs # 4, 5 and 7 desirable for the long term survival of the species. In conclusion, by using the jaguar as a focal species and combining SDM and expert opinion we were able to create a valid framework for practical conservation actions at the Caatinga biome. The same approach could be used for the conservation of other carnivores.

  3. Sex-biased parasitism is not universal: evidence from rodent-flea associations from three biomes.

    Science.gov (United States)

    Kiffner, Christian; Stanko, Michal; Morand, Serge; Khokhlova, Irina S; Shenbrot, Georgy I; Laudisoit, Anne; Leirs, Herwig; Hawlena, Hadas; Krasnov, Boris R

    2013-11-01

    The distribution of parasites among individual hosts is characterised by high variability that is believed to be a result of variations in host traits. To find general patterns of host traits affecting parasite abundance, we studied flea infestation of nine rodent species from three different biomes (temperate zone of central Europe, desert of Middle East and tropics of East Africa). We tested for independent and interactive effects of host sex and body mass on the number of fleas harboured by an individual host while accounting for spatial clustering of host and parasite sampling and temporal variation. We found no consistent patterns of the effect of host sex and body mass on flea abundance either among species within a biome or among biomes. We found evidence for sex-biased flea infestation in just five host species (Apodemus agrarius, Myodes glareolus, Microtus arvalis, Gerbillus andersoni, Mastomys natalensis). In six rodent species, we found an effect of body mass on flea abundance (all species mentioned above and Meriones crassus). This effect was positive in five species and negative in one species (Microtus arvalis). In M. glareolus, G. andersoni, M. natalensis, and M. arvalis, the relationship between body mass and flea abundance was mediated by host sex. This was manifested in steeper change in flea abundance with increasing body mass in male than female individuals (M. glareolus, G. andersoni, M. natalensis), whereas the opposite pattern was found in M. arvalis. Our findings suggest that sex and body mass are common determinants of parasite infestation in mammalian hosts, but neither of them follows universal rules. This implies that the effect of host individual characteristics on mechanisms responsible for flea acquisition may be manifested differently in different host species.

  4. Global soil-climate-biome diagram: linking soil properties to climate and biota

    Science.gov (United States)

    Zhao, X.; Yang, Y.; Fang, J.

    2017-12-01

    As a critical component of the Earth system, soils interact strongly with both climate and biota and provide fundamental ecosystem services that maintain food, climate, and human security. Despite significant progress in digital soil mapping techniques and the rapidly growing quantity of observed soil information, quantitative linkages between soil properties, climate and biota at the global scale remain unclear. By compiling a large global soil database, we mapped seven major soil properties (bulk density [BD]; sand, silt and clay fractions; soil pH; soil organic carbon [SOC] density [SOCD]; and soil total nitrogen [STN] density [STND]) based on machine learning algorithms (regional random forest [RF] model) and quantitatively assessed the linkage between soil properties, climate and biota at the global scale. Our results demonstrated a global soil-climate-biome diagram, which improves our understanding of the strong correspondence between soils, climate and biomes. Soil pH decreased with greater mean annual precipitation (MAP) and lower mean annual temperature (MAT), and the critical MAP for the transition from alkaline to acidic soil pH decreased with decreasing MAT. Specifically, the critical MAP ranged from 400-500 mm when the MAT exceeded 10 °C but could decrease to 50-100 mm when the MAT was approximately 0 °C. SOCD and STND were tightly linked; both increased in accordance with lower MAT and higher MAP across terrestrial biomes. Global stocks of SOC and STN were estimated to be 788 ± 39.4 Pg (1015 g, or billion tons) and 63 ± 3.3 Pg in the upper 30-cm soil layer, respectively, but these values increased to 1654 ± 94.5 Pg and 133 ± 7.8 Pg in the upper 100-cm soil layer, respectively. These results reveal quantitative linkages between soil properties, climate and biota at the global scale, suggesting co-evolution of the soil, climate and biota under conditions of global environmental change.

  5. Morphofunctional diversity of equine of varied genetic compositions raised in the Pantanal biome of Brazil.

    Science.gov (United States)

    de Rezende, Marcos Paulo Gonçalves; de Souza, Julio Cesar; Carneiro, Paulo Luiz Souza; Bozzi, Riccardo; Jardim, Rodrigo Jose Delgado; Malhado, Carlos Henrique Mendes

    2018-02-07

    Evaluating phenotypic diversity makes it possible to identify discrepancies in aptitudes among animals of different genetic bases, which is an indicator of adaptive or selective differences between populations. The objective of this work was to evaluate the morphofunctional diversity of 452 male and female adult equines (Arabian, Quarter Mile, Pantaneiro, and Criollo breeds, and undefined crossbreeds of horses and mules) raised in the Pantanal biome (Brazil). Linear measurements were performed to estimate conformation indexes. Initially, a discriminant analysis was performed, regardless of the animal's size, followed by factor analysis. The factors were characterized and used as new variables. The diversity among equines and their relationship with the factors were evaluated using multivariate analysis. The factors were classified according to their decreasing importance: balance, rusticity, and robustness for the measurement factors; and load, ability, conformation, and equilibrium for the index factors. The genetic groups of equines have well-defined morphofunctional characteristics. The main differences are based on the rusticity and ability typologies in relation to those based on performance. Equines introduced to the Pantanal biome presented a more robust and compact body with good conformation. As a result, these horses may have superior athletic performance during equestrian activities when compared to the Pantaneiro local breed. However, this biotype may represent less rusticity (less adaptive capacity). Therefore, the regional breed can be equal or better in equestrian activities than breeds introduced to the Pantanal biome. Thus, breeders may cross horses from local breeds as an alternative to those introduced. Undefined crossbred male equines presented a different profile from the Pantaneiro breed, which may indicate little use of crossbreeds in breeding.

  6. Skin Biomes.

    Science.gov (United States)

    Fyhrquist, N; Salava, A; Auvinen, P; Lauerma, A

    2016-05-01

    The cutaneous microbiome has been investigated broadly in recent years and some traditional perspectives are beginning to change. A diverse microbiome exists on human skin and has a potential to influence pathogenic microbes and modulate the course of skin disorders, e.g. atopic dermatitis. In addition to the known dysfunctions in barrier function of the skin and immunologic disturbances, evidence is rising that frequent skin disorders, e.g. atopic dermatitis, might be connected to a dysbiosis of the microbial community and changes in the skin microbiome. As a future perspective, examining the skin microbiome could be seen as a potential new diagnostic and therapeutic target in inflammatory skin disorders.

  7. Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota.

    Science.gov (United States)

    Byrne, M; Yeates, D K; Joseph, L; Kearney, M; Bowler, J; Williams, M A J; Cooper, S; Donnellan, S C; Keogh, J S; Leys, R; Melville, J; Murphy, D J; Porch, N; Wyrwoll, K-H

    2008-10-01

    The integration of phylogenetics, phylogeography and palaeoenvironmental studies is providing major insights into the historical forces that have shaped the Earth's biomes. Yet our present view is biased towards arctic and temperate/tropical forest regions, with very little focus on the extensive arid regions of the planet. The Australian arid zone is one of the largest desert landform systems in the world, with a unique, diverse and relatively well-studied biota. With foci on palaeoenvironmental and molecular data, we here review what is known about the assembly and maintenance of this biome in the context of its physical history, and in comparison with other mesic biomes. Aridification of Australia began in the Mid-Miocene, around 15 million years, but fully arid landforms in central Australia appeared much later, around 1-4 million years. Dated molecular phylogenies of diverse taxa show the deepest divergences of arid-adapted taxa from the Mid-Miocene, consistent with the onset of desiccation. There is evidence of arid-adapted taxa evolving from mesic-adapted ancestors, and also of speciation within the arid zone. There is no evidence for an increase in speciation rate during the Pleistocene, and most arid-zone species lineages date to the Pliocene or earlier. The last 0.8 million years have seen major fluctuations of the arid zone, with large areas covered by mobile sand dunes during glacial maxima. Some large, vagile taxa show patterns of recent expansion and migration throughout the arid zone, in parallel with the ice sheet-imposed range shifts in Northern Hemisphere taxa. Yet other taxa show high lineage diversity and strong phylogeographical structure, indicating persistence in multiple localised refugia over several glacial maxima. Similar to the Northern Hemisphere, Pleistocene range shifts have produced suture zones, creating the opportunity for diversification and speciation through hybridisation, polyploidy and parthenogenesis. This review highlights

  8. Mapping fire events in the transition of Amazon and Cerrado biome using remote sensing

    Science.gov (United States)

    Antunes Daldegan, G.; Roberts, D. A.; Peterson, S.; Ribeiro, F.

    2015-12-01

    Abstract to AGU Fire is considered one of the determinant factors that have shaped Cerrado biome, the Brazilian Savanna, considered the most biodiverse savanna in the world. At the same time, fire has not acted a major role during the evolution of the Amazon Forest due to the strong capacity it has to resist burning. Recently, with the expansion of the agricultural activities in the central Brazil, about 49% of the Cerrado has been converted to other uses and as deforestation vector runs towards the Amazon Forest it modifies the natural moist microclimate in the edges of the forest, increasing the likelihood of wildfires. Every year these ecosystems suffer with several fire events responsible for large burned areas, causing losses of biomass, biodiversity, soil nutrients, and releasing tons of CO2 that help climate change. The occurrence of fires has a direct relationship with the climate of the central portion of the south american continent, charaterized by a two seasons regime, wet and dry, each one lasting around 6 months. In this region is located the ecotone of these two majors Brazilians ecosystems. In the Cerrado biome fire is often used to manage pasture, stimulating the regrowth of natural grasses used as pasture and also to open new areas for agriculture. There are researches showing that people have been traditionally using fire as a lower cost way to manage their lands for different purposes. In the Amazon forest the cycle of deforestation started around the 60's with incentives from the federal government to populate the region in the middle of the last century, and most recently by the progress of the commodities prices, such as soybean and sugar-cane, that has occupied vast areas of the Cerrado and is marching towards the forest. In the Amazon, fire is frequently used to further open the areas that were previously logged selectively and then converted to agricultural uses.Given the ecological importance of the Amazon Forest and Cerrado biome and the

  9. Characterizing forest carbon stocks at tropical biome and landscape level in Mount Apo National Park, Philippines

    Science.gov (United States)

    Rubas, L. C.

    2012-12-01

    Forest resources sequester and store carbon, and serve as a natural brake on climate change. In the tropics, the largest source of greenhouse emission is from deforestation and forest degradation (Gibbs et al 2007). This paper attempts to compile sixty (60) existing studies on using remote sensing to measure key environmental forest indicators at two levels of scales: biome and landscape level. At the tropical forest biome level, there is not as much remote sensing studies that have been done as compared to other forest biomes. Also, existing studies on tropical Asia is still sparse compared to other tropical regions in Latin America and Africa. Biomass map is also produced for the tropical biome using keyhole macro language (KML) which is projected on Google Earth. The compiled studies showed there are four indicators being measured using remote sensors in tropical forest. These are biomass, landcover classification, deforestation and cloud cover. The landscape level will focus on Mount Apo National Park in the Philippines which is encompassing a total area of 54,974.87 hectares. It is one of the ten priority sites targeted in the World Bank-assisted Biodiversity Conservation Program. This park serves as the major watershed for the three provinces with 19 major rivers emanating from the montane formations. Only a small fraction of the natural forest that once covered the country remains. In spite of different policies that aim to reduce logging recent commercial deforestation, illegal logging and agricultural expansion pose an important threat to the remaining forest areas. In some locations in the country, these hotspots of deforestation overlap with the protected areas (Verburg et al 2006). The study site was clipped using ArcGIS from the forest biomass carbon density map produced by Gibbs and Brown (2007). Characterization on this national park using vegetation density, elevation, slope, land cover and precipitation will be conducted to determine factors that

  10. Desenvolvimento de revestimentos autolubrificantes para vedantes em borracha de componentes biomédicos

    OpenAIRE

    Santos, Mariana Borges da Silva

    2014-01-01

    No âmbito dos materiais biomédicos que utilizam a borracha como vedante, é importante que a função que estes apresentam de estancar líquidos não seja perdida, mas atuem de forma eficaz, demonstrando um baixo coeficiente de atrito durante o contacto com outra superfície. É então que surge este projeto e a ideia de aplicar um revestimento fino auto-lubrificante sobre as borrachas de modo a melhorar a sua ação, como no caso da aplicação em seringas. Foram realizadas diferentes ...

  11. Reconstructing biomes from palaeoecological data: a general method and its application to European pollen data at 0 and 6 ka

    Energy Technology Data Exchange (ETDEWEB)

    Prentice, I.C. [Lund Univ. (Sweden). Dept. of Ecology; Guiot, J. [Lab. de Botanique Historique et Palynologie, CNRS, Marseille (France); Huntley, B. [Univ. of Durham (United Kingdom). Dept. of Biological Sciences; Jolly, D. [Lund Univ. (Sweden). Dept. of Ecology; Cheddadi, R. [European Pollen Data Base, Centre Universitaire d`Arles (France)

    1996-02-01

    Biome models allow the results of experiments with atmospheric general circulation models to be translated into global maps of potential natural vegetation. The use of biome models as a diagnostic tool for palaeoclimate simulations can yield maps that are directly comparable with palaeoecological (pollen and plant macrofossil) records provided these records are ``biomized``, i.e. assigned to biomes in a consistent way. This article describes a method for the objective biomization of pollen samples based on fuzzy logic. Pollen types (taxa) are assigned to one or more plant functional types (PFTs), then affinity scores are calculated for each biome in turn based on its list of characteristic PFTs. The pollen sample is assigned to the biome to which it has the highest affinity, subject to a tie-breaking rule. Modern pollen data from surface samples, reflecting present vegetation across Europe, are used to validate the method. Pollen data from dated sediment cores are then used to reconstruct European vegetation patterns for 6 ka. The reconstruction shows systematic differences from present that are consistent with previous interpretations. The method has proved robust with respect to human impacts on vegetation, and provides a rational way to interpret combinations of pollen types that do not have present-day analogs. The method demands minimal prior information and is therefore equally suitable for use in other regions with richer floras, and/or lower densities of available modern and fossil pollen samples, than Europe. (orig.). With 3 figs., 3 tabs.

  12. Impacts of land-use and land-cover change on stream hydrochemistry in the Cerrado and Amazon biomes.

    Science.gov (United States)

    Nóbrega, Rodolfo L B; Guzha, Alphonce C; Lamparter, Gabriele; Amorim, Ricardo S S; Couto, Eduardo G; Hughes, Harold J; Jungkunst, Hermann F; Gerold, Gerhard

    2018-04-14

    Studies on the impacts of land-use and land-cover change on stream hydrochemistry in active deforestation zones of the Amazon agricultural frontier are limited and have often used low-temporal-resolution datasets. Moreover, these impacts are not concurrently assessed in well-established agricultural areas and new deforestations hotspots. We aimed to identify these impacts using an experimental setup to collect high-temporal-resolution hydrological and hydrochemical data in two pairs of low-order streams in catchments under contrasting land use and land cover (native vegetation vs. pasture) in the Amazon and Cerrado biomes. Our results indicate that the conversion of natural landscapes to pastures increases carbon and nutrient fluxes via streamflow in both biomes. These changes were the greatest in total inorganic carbon in the Amazon and in potassium in the Cerrado, representing a 5.0- and 5.5-fold increase in the fluxes of each biome, respectively. We found that stormflow, which is often neglected in studies on stream hydrochemistry in the tropics, plays a substantial role in the carbon and nutrient fluxes, especially in the Amazon biome, as its contributions to hydrochemical fluxes are mostly greater than the volumetric contribution to the total streamflow. These findings demonstrate that assessments of the impacts of deforestation in the Amazon and Cerrado biomes should also take into account rapid hydrological pathways; however, this can only be achieved through collection of high-temporal-resolution data. Copyright © 2018 Elsevier B.V. All rights reserved.

  13. Evolution of seed dispersal in the Cerrado biome: ecological and phylogenetic considerations

    Directory of Open Access Journals (Sweden)

    Marcelo Kuhlmann

    2016-01-01

    Full Text Available ABSTRACT The investigation of the phylogeny of a group of organisms has the potential to identify ecological and evolutionary processes that have been occurring within a community. Seed dispersal is a key process in the life cycle of vegetation and reflects different reproductive strategies of plants to a set of ecological and evolutionary factors. Knowing the dispersal syndromes and fruits types of a plant community may help elucidate plant-animal interactions and colonization strategies of plants. We investigated dispersal syndromes and fruit types in Cerrado formations as a parameter for understanding the evolution of angiosperm reproductive strategies in this mega-diverse tropical biome. To do this we identified and mapped the distribution of different parameters associated with seed dispersal on a phylogeny of Cerrado angiosperms genera and tested the presence of phylogenetic signal. The results showed that there were strong relationships between fruit types, seed dispersal strategies and vegetation life forms and that these traits were closely related to angiosperms phylogeny and, together, contribute to the evolution of plants in the forest, savanna and grassland formations of the Cerrado biome.

  14. Antiviral and Antioxidant Activities of Sulfated Galactomannans from Plants of Caatinga Biome

    Directory of Open Access Journals (Sweden)

    Márcia Maria Mendes Marques

    2015-01-01

    Full Text Available Dengue represents a serious social and economic public health problem; then trying to contribute to improve its control, the objective of this research was to develop phytoterapics for dengue treatment using natural resources from Caatinga biome. Galactomannans isolated from Adenanthera pavonina L., Caesalpinia ferrea Mart., and Dimorphandra gardneriana Tull were chemically sulfated in order to evaluate the antioxidant, and antiviral activities and the role in the inhibition of virus DENV-2 in Vero cells. A positive correlation between the degree of sulfation, antioxidant and antiviral activities was observed. The sulfated galactomannans showed binding to the virus surface, indicating that they interact with DENV-2. The sulfated galactomannans from C. ferrea showed 96% inhibition of replication of DENV-2 followed by D. gardneriana (94% and A. pavonina (77% at 25 µg/mL and all sulfated galactomannans also showed antioxidant activity. This work is the first report of the antioxidant and antiviral effects of sulfated galactomannans against DENV-2. The results are very promising and suggest that these sulfated galactomannans from plants of Caatinga biome act in the early step of viral infection. Thus, sulfated galactomannans may act as an entry inhibitor of DENV-2.

  15. Contribution to the discussions on the origin of the cerrado biome: Brazilian savanna

    Directory of Open Access Journals (Sweden)

    MHO. Pinheiro

    Full Text Available Theories that attempt to explain the origin of the cerrado biome are mostly based on the isolated action of three major factors: climate, fire and soil. Another factor that has been mentioned is that of human interference. We hypothesise that the evolutionary origin of this biome resulted from the complex interaction of climate, fire and soil, with climate being the triggering agent of this assumed interaction. Fire, as well as acid and dystrophic soils, would be factors involved in the selection of savanna species throughout climatic events, during the Tertiary and the Quaternary, e.g. Pliocene and Pleistocene. The genesis of the physiognomies that would give rise to cerrado sensu lato, rather than forest formations, could have occurred due to the strong pressure exerted by the reduction in water availability, and the selection of the species adapted to the new conditions imposed by the environment. The characteristics of cerrado sensu lato soil, originated from edaphic impoverishment caused by lixiviation and successive past fires, would remain, even after hydric availability increased following the Pleistocene glaciations.

  16. Contribution to the discussions on the origin of the cerrado biome: Brazilian savanna.

    Science.gov (United States)

    Pinheiro, M H O; Monteiro, R

    2010-02-01

    Theories that attempt to explain the origin of the cerrado biome are mostly based on the isolated action of three major factors: climate, fire and soil. Another factor that has been mentioned is that of human interference. We hypothesise that the evolutionary origin of this biome resulted from the complex interaction of climate, fire and soil, with climate being the triggering agent of this assumed interaction. Fire, as well as acid and dystrophic soils, would be factors involved in the selection of savanna species throughout climatic events, during the Tertiary and the Quaternary, e.g. Pliocene and Pleistocene. The genesis of the physiognomies that would give rise to cerrado sensu lato, rather than forest formations, could have occurred due to the strong pressure exerted by the reduction in water availability, and the selection of the species adapted to the new conditions imposed by the environment. The characteristics of cerrado sensu lato soil, originated from edaphic impoverishment caused by lixiviation and successive past fires, would remain, even after hydric availability increased following the Pleistocene glaciations.

  17. Detection of wild animals as carriers of Leptospira by PCR in the Pantanal biome, Brazil.

    Science.gov (United States)

    Vieira, Anahi S; Narduche, Lorena; Martins, Gabriel; Schabib Péres, Igor A H F; Zimmermann, Namor P; Juliano, Raquel S; Pellegrin, Aiesca O; Lilenbaum, Walter

    2016-11-01

    Leptospiral infection is widespread in wildlife. In this context, wild ecosystems in tropical countries hold a vast biodiversity, including several species that may act as potential reservoirs of leptospires. The Pantanal biome presents highly favorable environmental conditions for the occurrence of leptospirosis, such as high temperatures, constant flooding, and high biodiversity. The purpose of this study was to detect wild animals as carriers of Leptospira sp. using direct methods (PCR and culture) in the Pantanal biome, Brazil. A total of 35 animals were studied, namely Cerdocyon thous, Nasua nasua, Ozotoceros bezoarticus, and Sus scrofa species. Blood for serology (MAT) and urine for bacteriological culturing and PCR was sampled. The most prevalent serogroups were Javanica and Djasiman. Additionally, 40.6% of these animals presented PCR positive reactions. Seroreactivity associated with the high frequency of leptospiral carriers among the different studied species suggests a high level of exposure of the studied animals to pathogenic Leptospira strains. Our results are still limited and the actual role of the studied animals in the epidemiology of leptospirosis in the Pantanal region remains to be elucidated. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. Above- and Belowground Biomass Allocation in Shrub Biomes across the Northeast Tibetan Plateau

    Science.gov (United States)

    Yang, Yuanhe; Yang, Lucun; Zhou, Guoying

    2016-01-01

    Biomass partitioning has been explored across various biomes. However, the strategies of allocation in plants still remain contentious. This study investigated allocation patterns of above- and belowground biomass at the community level, using biomass survey from the Tibetan Plateau. We explored above- and belowground biomass by conducting three consecutive sampling campaigns across shrub biomes on the northeast Tibetan Plateau during 2011–2013. We then documented the above-ground biomass (AGB), below-ground biomass (BGB) and root: shoot ratio (R/S) and the relationships between R/S and environment factors using data from 201 plots surveyed from 67 sites. We further examined relationships between above-ground and below-ground biomass across various shrub types. Our results indicated that the median values of AGB, BGB, and R/S in Tibetan shrub were 1102.55, 874.91 g m-2, and 0.85, respectively. R/S showed significant trend with mean annual precipitation (MAP), while decreased with mean annual temperature (MAT). Reduced major axis analysis indicated that the slope of the log-log relationship between above- and belowground biomass revealed a significant difference from 1.0 over space, supporting the optimal hypothesis. Interestingly, the slopes of the allometric relationship between log AGB and log BGB differed significantly between alpine and desert shrub. Our findings supported the optimal theory of above- and belowground biomass partitioning in Tibetan shrub, while the isometric hypothesis for alpine shrub at the community level. PMID:27119379

  19. The deforestation story: testing for anthropogenic origins of Africa's flammable grassy biomes.

    Science.gov (United States)

    Bond, William; Zaloumis, Nicholas P

    2016-06-05

    Africa has the most extensive C4 grassy biomes of any continent. They are highly flammable accounting for greater than 70% of the world's burnt area. Much of Africa's savannas and grasslands occur in climates warm enough and wet enough to support closed forests. The combination of open grassy systems and the frequent fires they support have long been interpreted as anthropogenic artefacts caused by humans igniting frequent fires. True grasslands, it was believed, would be restricted to climates too dry or too cold to support closed woody vegetation. The idea that higher-rainfall savannas are anthropogenic and that fires are of human origin has led to initiatives to 'reforest' Africa's open grassy systems paid for by carbon credits under the assumption that the net effect of converting these system to forests would sequester carbon, reduce greenhouse gases and mitigate global warming. This paper reviews evidence for the antiquity of African grassy ecosystems and for the fires that they sustain. Africa's grassy biomes and the fires that maintain them are ancient and there is no support for the idea that humans caused large-scale deforestation. Indicators of old-growth grasslands are described. These can help distinguish secondary grasslands suitable for reforestation from ancient grasslands that should not be afforested.This article is part of the themed issue 'The interaction of fire and mankind'. © 2016 The Author(s).

  20. Phylogeny and cryptic diversity in geckos (Phyllopezus; Phyllodactylidae; Gekkota) from South America's open biomes.

    Science.gov (United States)

    Gamble, Tony; Colli, Guarino R; Rodrigues, Miguel T; Werneck, Fernanda P; Simons, Andrew M

    2012-03-01

    The gecko genus Phyllopezus occurs across South America's open biomes: Cerrado, Seasonally Dry Tropical Forests (SDTF, including Caatinga), and Chaco. We generated a multi-gene dataset and estimated phylogenetic relationships among described Phyllopezus taxa and related species. We included exemplars from both described Phyllopezus pollicaris subspecies, P. p. pollicaris and P. p.przewalskii. Phylogenies from the concatenated data as well as species trees constructed from individual gene trees were largely congruent. All phylogeny reconstruction methods showed Bogertia lutzae as the sister species of Phyllopezus maranjonensis, rendering Phyllopezus paraphyletic. We synonymized the monotypic genus Bogertia with Phyllopezus to maintain a taxonomy that is isomorphic with phylogenetic history. We recovered multiple, deeply divergent, cryptic lineages within P. pollicaris. These cryptic lineages possessed mtDNA distances equivalent to distances among other gekkotan sister taxa. Described P. pollicaris subspecies are not reciprocally monophyletic and current subspecific taxonomy does not accurately reflect evolutionary relationships among cryptic lineages. We highlight the conservation significance of these results in light of the ongoing habitat loss in South America's open biomes. Copyright © 2011 Elsevier Inc. All rights reserved.

  1. Cities as Novel Biomes;Recognizing Urban Ecosystem Services as Anthropogenic

    Directory of Open Access Journals (Sweden)

    Stephanie ePincetl

    2015-12-01

    Full Text Available Urban Ecosystem Science is now an established science, arising along side the historic shift of humans to becoming in majority urban dwellers. In this Perspective I suggest there is a need to develop a new framework for UES as embedded in distinct urban biomes that can be classified by city-type and typologized. UES are largely the artifact of human decision making from what to plant where, to determining the urban infrastructure type in which UES will be placed. Developing urban typologies by climate zone, level of development, size and history will better enable the understanding of UES. I attempt to show the rise of the importance of nature, and of urban nature following the development of industrial city, and the importance of human intent in creating these urban ecosystems over time. If humans choose to manage cities through increasing UES, this will require coupled shifts, the shift in rules and regulations, goals and processes and shifts in urban form, infrastructure and function – socio-technical-ecological changes – driven by human decision-making. Such efforts will vary widely by city -- by urban biome.

  2. Above- and Belowground Biomass Allocation in Shrub Biomes across the Northeast Tibetan Plateau.

    Science.gov (United States)

    Nie, Xiuqing; Yang, Yuanhe; Yang, Lucun; Zhou, Guoying

    2016-01-01

    Biomass partitioning has been explored across various biomes. However, the strategies of allocation in plants still remain contentious. This study investigated allocation patterns of above- and belowground biomass at the community level, using biomass survey from the Tibetan Plateau. We explored above- and belowground biomass by conducting three consecutive sampling campaigns across shrub biomes on the northeast Tibetan Plateau during 2011-2013. We then documented the above-ground biomass (AGB), below-ground biomass (BGB) and root: shoot ratio (R/S) and the relationships between R/S and environment factors using data from 201 plots surveyed from 67 sites. We further examined relationships between above-ground and below-ground biomass across various shrub types. Our results indicated that the median values of AGB, BGB, and R/S in Tibetan shrub were 1102.55, 874.91 g m-2, and 0.85, respectively. R/S showed significant trend with mean annual precipitation (MAP), while decreased with mean annual temperature (MAT). Reduced major axis analysis indicated that the slope of the log-log relationship between above- and belowground biomass revealed a significant difference from 1.0 over space, supporting the optimal hypothesis. Interestingly, the slopes of the allometric relationship between log AGB and log BGB differed significantly between alpine and desert shrub. Our findings supported the optimal theory of above- and belowground biomass partitioning in Tibetan shrub, while the isometric hypothesis for alpine shrub at the community level.

  3. Feedbacks between land cover and climate changes in the Brazilian Amazon and Cerrado biomes

    Science.gov (United States)

    Coe, M. T.; Silverio, D. V.; Bustamante, M.; Macedo, M.; Shimbo, J.; Brando, P. M.

    2016-12-01

    An estimated 20% of Amazon forests and 45% of Cerrado savannas have been cleared to make way for the expansion of croplands and pasturelands in Brazil. Although deforestation rates have decreased or remained steady over the last decade, the cumulative area deforested continues to grow in both biomes. These land-use transitions are expected to influence regional climate by reducing evapotranspiration (ET), increasing land surface temperatures (LST), and ultimately reducing regional precipitation. Here we present results from spatial analyses to quantify the impact of land-use transitions on the regional climate of the Amazon-Cerrado agricultural frontier. The analyses combine satellite observations and model outputs from the MODIS dataset. Results from the southeastern Amazon indicate that transitions from forest to pasture or cropland decreased mean annual ET (by 24% and 32%, respectively) and increased LST (by 4.2°C and 6.4°C). Preliminary results from the Cerrado indicate that transitions from woody savannas to pasture or cropland also result in substantial reductions in mean annual ET (23% and 20%, respectively) and increases in LST (by 1.6°C in both cases). These results reinforce the need to better understand how land-use change at regional scales may alter climate by changing ecosystem properties (beyond carbon stocks and fluxes). It is important to evaluate these responses across different biomes, particularly in tropical regions under increasing deforestation pressure.

  4. Above- and Belowground Biomass Allocation in Shrub Biomes across the Northeast Tibetan Plateau.

    Directory of Open Access Journals (Sweden)

    Xiuqing Nie

    Full Text Available Biomass partitioning has been explored across various biomes. However, the strategies of allocation in plants still remain contentious. This study investigated allocation patterns of above- and belowground biomass at the community level, using biomass survey from the Tibetan Plateau. We explored above- and belowground biomass by conducting three consecutive sampling campaigns across shrub biomes on the northeast Tibetan Plateau during 2011-2013. We then documented the above-ground biomass (AGB, below-ground biomass (BGB and root: shoot ratio (R/S and the relationships between R/S and environment factors using data from 201 plots surveyed from 67 sites. We further examined relationships between above-ground and below-ground biomass across various shrub types. Our results indicated that the median values of AGB, BGB, and R/S in Tibetan shrub were 1102.55, 874.91 g m-2, and 0.85, respectively. R/S showed significant trend with mean annual precipitation (MAP, while decreased with mean annual temperature (MAT. Reduced major axis analysis indicated that the slope of the log-log relationship between above- and belowground biomass revealed a significant difference from 1.0 over space, supporting the optimal hypothesis. Interestingly, the slopes of the allometric relationship between log AGB and log BGB differed significantly between alpine and desert shrub. Our findings supported the optimal theory of above- and belowground biomass partitioning in Tibetan shrub, while the isometric hypothesis for alpine shrub at the community level.

  5. The effects of biome and spatial scale on the Co-occurrence patterns of a group of Namibian beetles

    Science.gov (United States)

    Pitzalis, Monica; Montalto, Francesca; Amore, Valentina; Luiselli, Luca; Bologna, Marco A.

    2017-08-01

    Co-occurrence patterns (studied by C-score, number of checkerboard units, number of species combinations, and V-ratio, and by an empirical Bayes approach developed by Gotelli and Ulrich, 2010) are crucial elements in order to understand assembly rules in ecological communities at both local and spatial scales. In order to explore general assembly rules and the effects of biome and spatial scale on such rules, here we studied a group of beetles (Coleoptera, Meloidae), using Namibia as a case of study. Data were gathered from 186 sampling sites, which allowed collection of 74 different species. We analyzed data at the level of (i) all sampled sites, (ii) all sites stratified by biome (Savannah, Succulent Karoo, Nama Karoo, Desert), and (iii) three randomly selected nested areas with three spatial scales each. Three competing algorithms were used for all analyses: (i) Fixed-Equiprobable, (ii) Fixed-Fixed, and (iii) Fixed-Proportional. In most of the null models we created, co-occurrence indicators revealed a non-random structure in meloid beetle assemblages at the global scale and at the scale of biomes, with species aggregation being much more important than species segregation in determining this non-randomness. At the level of biome, the same non-random organization was uncovered in assemblages from Savannah (where the aggregation pattern was particularly strong) and Succulent Karoo, but not in Desert and Nama Karoo. We conclude that species facilitation and similar niche in endemic species pairs may be particularly important as community drivers in our case of study. This pattern is also consistent with the evidence of a higher species diversity (normalized according to biome surface area) in the two former biomes. Historical patterns were perhaps also important for Succulent Karoo assemblages. Spatial scale had a reduced effect on patterning our data. This is consistent with the general homogeneity of environmental conditions over wide areas in Namibia.

  6. Reconocimiento biométrico vascular y su evaluación de rendimiento en plataforma BioAPI C#

    OpenAIRE

    Hryhor, Stanislav

    2014-01-01

    La identificación biométrica es aquella que se basa en el uso de las características físicas o de comportamiento de las personas. En las décadas finales del siglo XX y en los inicios del XXI el uso de sistemas automáticos capaces de confirmar identidades de personas por medio de las técnicas biométricas ha cobrado cada vez más importancia. Sus bajísimas tasas de error y posibilidad de fraude han hecho que importantes entidades como los órganos de seguridad del estado y las enti...

  7. Structural development and web service based sensitivity analysis of the Biome-BGC MuSo model

    Science.gov (United States)

    Hidy, Dóra; Balogh, János; Churkina, Galina; Haszpra, László; Horváth, Ferenc; Ittzés, Péter; Ittzés, Dóra; Ma, Shaoxiu; Nagy, Zoltán; Pintér, Krisztina; Barcza, Zoltán

    2014-05-01

    Studying the greenhouse gas exchange, mainly the carbon dioxide sink and source character of ecosystems is still a highly relevant research topic in biogeochemistry. During the past few years research focused on managed ecosystems, because human intervention has an important role in the formation of the land surface through agricultural management, land use change, and other practices. In spite of considerable developments current biogeochemical models still have uncertainties to adequately quantify greenhouse gas exchange processes of managed ecosystem. Therefore, it is an important task to develop and test process-based biogeochemical models. Biome-BGC is a widely used, popular biogeochemical model that simulates the storage and flux of water, carbon, and nitrogen between the ecosystem and the atmosphere, and within the components of the terrestrial ecosystems. Biome-BGC was originally developed by the Numerical Terradynamic Simulation Group (NTSG) of University of Montana (http://www.ntsg.umt.edu/project/biome-bgc), and several other researchers used and modified it in the past. Our research group developed Biome-BGC version 4.1.1 to improve essentially the ability of the model to simulate carbon and water cycle in real managed ecosystems. The modifications included structural improvements of the model (e.g., implementation of multilayer soil module and drought related plant senescence; improved model phenology). Beside these improvements management modules and annually varying options were introduced and implemented (simulate mowing, grazing, planting, harvest, ploughing, application of fertilizers, forest thinning). Dynamic (annually varying) whole plant mortality was also enabled in the model to support more realistic simulation of forest stand development and natural disturbances. In the most recent model version separate pools have been defined for fruit. The model version which contains every former and new development is referred as Biome-BGC MuSo (Biome

  8. Pollen-based biome reconstructions for Colombia at 3000, 6000, 9000, 12 000, 15 000 and 18 000 14C yr ago: Late Quaternary tropical vegetation dynamics

    Science.gov (United States)

    Marchant, Robert; Behling, Hermann; Berrio, Juan-Carlos; Cleef, Antoine; Duivenvoorden, Joost; Hooghiemstra, Henry; Kuhry, Peter; Melief, Bert; Schreve-Brinkman, Elisabeth; van Geel, Bas; van der Hammen, Thomas; van Reenen, Guido; Wille, Michael

    2002-02-01

    Colombian biomes are reconstructed at 45 sites from the modern period extending to the Last Glacial Maximum (LGM). The basis for our reconstruction is pollen data assigned to plant functional types and biomes at six 3000-yr intervals. A reconstruction of modern biomes is used to check the treatment of the modern pollen data set against a map of potential vegetation. This allows the biomes reconstructed at past periods to be assessed relative to the modern situation. This process also provides a check on the a priori assignment of pollen taxa to plant functional types and biomes. For the majority of the sites, the pollen data accurately reflect the potential vegetation, even though much of the original vegetation has been transformed by agricultural practices. At 18 000 14C yr BP, a generally cool and dry environment is reflected in biome, assignments of cold mixed forests, cool evergreen forests and cool grassland-shrub; the latter extending to lower altitudes than presently recorded. This signal is strongly recorded at 15 000 and 12 000 14C yr BP, the vegetation at these times also reflecting a relatively cool and dry environment. At 9000 14C yr BP there is a shift to biomes thought to result from slightly cooler environmental conditions. This trend is reversed by 6000 14C yr BP; most sites, within a range of different environmental settings, recording a shift to more xeric biome types. There is an expansion of steppe and cool mixed-forest biomes, replacing tropical dry forest and cool grassland-shrub biomes, respectively. These changes in biome assignments from the modern situation can be interpreted as a biotic response to mid-Holocene climatic aridity. At 3000 14C yr BP the shift is mainly to biomes characteristic of slightly more mesic environmental conditions.There are a number of sites that do not change biome assignment relative to the modern reconstruction, although the affinities that these sites have to a specific biome do change. These anomalies are

  9. Climate and biome simulations for the past 21,000 years

    Science.gov (United States)

    Kutzbach, J.; Gallimore, R.; Harrison, S.; Behling, P.; Selin, R.; Laarif, F.

    This paper reports on a set of paleoclimate simulations for 21, 16, 14, 11 and 6 ka (thousands of years ago) carried out with the Community Climate Model, Version 1 (CCM1) of the National Center for Atmospheric Research (NCAR). This climate model uses four interactive components that were not available in our previous simulations with the NCAR CCM0 ( COHMAP, 1988Science, 241, 1043-1052; Wright et al., 1993Global Climate Since the Last Glocial Maximum, University of Minnesota Press, MN): soil moisture, snow hydrology, sea-ice, and mixed-layer ocean temperature. The new simulations also use new estimates of ice sheet height and size from ( Peltier 1994, Science, 265, 195-201), and synchronize the astronomically dated orbital forcing with the ice sheet and atmospheric CO 2 levels corrected from radiocarbon years to calendar years. The CCM1 simulations agree with the previous simulations in their most general characteristics. The 21 ka climate is cold and dry, in response to the presence of the ice sheets and lowered CO 2 levels. The period 14-6 ka has strengthened northern summer monsoons and warm mid-latitude continental interiors in response to orbital changes. Regional differences between the CCM1 and CCM0 simulations can be traced to the effects of either the new interactive model components or the new boundary conditions. CCM1 simulates climate processes more realistically, but has additional degrees of freedom that can allow the model to 'drift' toward less realistic solutions in some instances. The CCM1 simulations are expressed in terms of equilibrium vegetation using BIOME 1, and indicate large shifts in biomes. Northern tundra and forest biomes are displaced southward at glacial maximum and subtropical deserts contract in the mid-Holocene when monsoons strengthen. These vegetation changes could, if simulated interactively, introduce additional climate feedbacks. The total area of vegetated land remains nearly constant through time because the exposure of

  10. Association of Bartonella Species with Wild and Synanthropic Rodents in Different Brazilian Biomes.

    Science.gov (United States)

    Gonçalves, Luiz Ricardo; Favacho, Alexsandra Rodrigues de Mendonça; Roque, André Luiz Rodrigues; Mendes, Natalia Serra; Fidelis Junior, Otávio Luiz; Benevenute, Jyan Lucas; Herrera, Heitor Miraglia; D'Andrea, Paulo Sérgio; de Lemos, Elba Regina Sampaio; Machado, Rosangela Zacarias; André, Marcos Rogério

    2016-12-15

    Bartonella spp. comprise an ecologically successful group of microorganisms that infect erythrocytes and have adapted to different hosts, which include a wide range of mammals, besides humans. Rodents are reservoirs of about two-thirds of Bartonella spp. described to date; and some of them have been implicated as causative agents of human diseases. In our study, we performed molecular and phylogenetic analyses of Bartonella spp. infecting wild rodents from five different Brazilian biomes. In order to characterize the genetic diversity of Bartonella spp., we performed a robust analysis based on three target genes, followed by sequencing, Bayesian inference, and maximum likelihood analysis. Bartonella spp. were detected in 25.6% (117/457) of rodent spleen samples analyzed, and this occurrence varied among different biomes. The diversity analysis of gltA sequences showed the presence of 15 different haplotypes. Analysis of the phylogenetic relationship of gltA sequences performed by Bayesian inference and maximum likelihood showed that the Bartonella species detected in rodents from Brazil was closely related to the phylogenetic group A detected in other cricetid rodents from North America, probably constituting only one species. Last, the Bartonella species genogroup identified in the present study formed a monophyletic group that included Bartonella samples from seven different rodent species distributed in three distinct biomes. In conclusion, our study showed that the occurrence of Bartonella bacteria in rodents is much more frequent and widespread than previously recognized. In the present study, we reported the occurrence of Bartonella spp. in some sites in Brazil. The identification and understanding of the distribution of this important group of bacteria may allow the Brazilian authorities to recognize potential regions with the risk of transmission of these pathogens among wild and domestic animals and humans. In addition, our study accessed important gaps in

  11. Biométria de frutos e sementes de Luetzelburgia auriculata (Allemão Ducke

    Directory of Open Access Journals (Sweden)

    Roberto Ferreira Barroso

    2016-12-01

    Full Text Available A Caatinga apresenta uma grande diversidade de espécies vegetais, dentre elas Luetzelburgia auriculata é uma das espécies predominantes no bioma, desempenhando papel fundamental para o ecossistema local. Este trabalho objetivou descrever as características biométricas de frutos e sementes de Luetzelburgia auriculata.  Para a descrição das características da semente foram coletados 200 frutos e 200 sementes de plantas nativas do município de Santa Helena, Paraíba. As amostras foram encaminhadas ao Laboratório de Nutrição Mineral de Plantas do Centro de Saúde e Tecnologia Rural de Universidade Federal de Campina Grande para a realização das devidas aferições biométricas. Os frutos foram analisado pelo comprimento, espessura superior, mediana e inferior; largura superior, mediana e inferior. Para as sementes, foram analisados comprimento, espessura e a largura. Verificou-se que o comprimento dos frutos variou de 50,7 a 98,2 cm, a espessura de 6,00 a 17 mm e largura variando de 12,4 a 21,8 mm. Em relação às sementes, 46% se enquadraram na classe de comprimento com intervalo de 19,9 a 20,8 mm. A espécie Luetzelburgia auriculata apresentam variabilidade nas características biométricas de frutos e sementesBiometrics of fruit and seeds of Luetzelburgia auriculata (Allemão DuckeAbstract: The Caatinga presents a great diversity of plant species, among them the woodpecker (Luetzelburgia auriculata (Allemao Ducke. is one of the predominant species in the biome, playing a fundament al role for the local ecosystem. This work aimed to describe the biometric characteristics of fruits and seeds of Pau de Pedra. For the description of the characteristics of the Luetzelburgia auriculata (Allemão Ducke seed, 200 fruits and 200 seeds of native plants of the municipality of Santa Helena, Paraíba state were collected for biometry and seed mass. Afterwards they were packed in plastic bags and properly identified and taken to Laboratório de

  12. Serologic and Molecular Evidence of Vaccinia Virus Circulation among Small Mammals from Different Biomes, Brazil.

    Science.gov (United States)

    Miranda, Júlia B; Borges, Iara A; Campos, Samantha P S; Vieira, Flávia N; de Ázara, Tatiana M F; Marques, Fernanda A; Costa, Galileu B; Luis, Ana Paula M F; de Oliveira, Jaqueline S; Ferreira, Paulo César P; Bonjardim, Cláudio Antônio; da Silva, Silvio L M; Eiras, Álvaro E; Abrahão, Jônatas S; Kroon, Erna G; Drumond, Betânia P; Paglia, Adriano P; Trindade, Giliane de S

    2017-06-01

    Vaccinia virus (VACV) is a zoonotic agent that causes a disease called bovine vaccinia, which is detected mainly in milking cattle and humans in close contact with these animals. Even though many aspects of VACV infection have been described, much is still unknown about its circulation in the environment and its natural hosts/reservoirs. To investigate the presence of Orthopoxvirus antibodies or VACV DNA, we captured small rodents and marsupials in 3 areas of Minas Gerais state, Brazil, and tested their samples in a laboratory. A total of 336 animals were tested; positivity ranged from 18.1% to 25.5% in the 3 studied regions located in different biomes, including the Atlantic Forest and the Cerrado. Analysis of nucleotide sequences indicated co-circulation of VACV groups I and II. Our findings reinforce the possible role played by rodents and marsupials in VACV maintenance and its transmission chain.

  13. Genetic Divergence in Eucalyptus camaldulensis Progenies in the Savanna Biome in Mato Grosso, Brazil.

    Directory of Open Access Journals (Sweden)

    Reginaldo Brito da Costa

    Full Text Available Assessing the parental genetic differences and their subsequent prediction of progeny performance is an important first step to assure the efficiency of any breeding program. In this study, we estimate the genetic divergence in Eucalyptus camaldulensis based on the morphological traits of 132 progenies grown in a savanna biome. Thus, a field experiment was performed using a randomized block design and five replications to compare divergences in total height, commercial height, diameter at breast height, stem form and survival rate at 48 months. Tocher's clustering method was performed using the Mahalanobis and Euclidian distances. The Mahalanobis distance seemed more reliable for the assessed parameters and clustered all of the progenies into fourteen major groups. The most similar progenies (86 accessions were clustered into Group I, while the most dissimilar (1 progeny represented Group XIV. The divergence analysis indicated that promising crosses could be made between progenies allocated in different groups for high genetic divergence and for favorable morphological traits.

  14. Pennsylvanian coniferopsid forests in sabkha facies reveal the nature of seasonal tropical biome

    Science.gov (United States)

    Falcon-Lang, H. J.; Jud, N.A.; John, Nelson W.; DiMichele, W.A.; Chaney, D.S.; Lucas, S.G.

    2011-01-01

    Pennsylvanian fossil forests are known from hundreds of sites across tropical Pangea, but nearly all comprise remains of humid Coal Forests. Here we report a unique occurrence of seasonally dry vegetation, preserved in growth position along >5 km of strike, in the Pennsylvanian (early Kasimovian, Missourian) of New Mexico (United States). Analyses of stump anatomy, diameter, and spatial density, coupled with observations of vascular traces and associated megaflora, show that this was a deciduous, mixed-age, coniferopsid woodland (~100 trees per hectare) with an open canopy. The coniferopsids colonized coastal sabkha facies and show tree rings, confirming growth under seasonally dry conditions. Such woodlands probably served as the source of coniferopsids that replaced Coal Forests farther east in central Pangea during drier climate phases. Thus, the newly discovered woodland helps unravel biome-scale vegetation dynamics and allows calibration of climate models. ?? 2011 Geological Society of America.

  15. Biométrie basée sur la reconnaissance des veines de la main

    OpenAIRE

    Petrovic, Igor; Roduit, Pierre

    2014-01-01

    L'authentification consiste à apporter et à contrôler la preuve de l'identité d'une personne, de l'émetteur d'un message, d'un logiciel, d'un serveur logique ou d'un équipement. Plusieurs techniques d’identification des personnes s’appuient sur la biométrie qui désigne au sens large l’étude quantitative des êtres vivants. Plus besoin dans ce cas de se soucier des mots de passe, l’être humain devient lui-même la clé des systèmes de sécurité. La reconnaissance des veines de la main est une de c...

  16. Redacción de trabajos para publicaciones biomédicas

    OpenAIRE

    Ribera Banús, Cèlia

    2001-01-01

    Com un manual d'estil, aquest article pretén descriure els tipus de textos més comuns que es publiquen a les revistes biomèdiques. La primera divisió s'estableix entre els que es fan per encàrrec (com serien originals, editorials i revisions) i els que es fan motu propio (originals, notes clíniques i cartes al director). A més de normes descriptives per a la redacció també se n'ofereixen de tècniques per tal que puguin ser acceptats, fita final de tot text científic.

  17. Modeling impacts of human footprint and soil variability on the potential distribution of invasive plant species in different biomes

    Science.gov (United States)

    Wan, Ji-Zhong; Wang, Chun-Jing; Yu, Fei-Hai

    2017-11-01

    Human footprint and soil variability may be important in shaping the spread of invasive plant species (IPS). However, until now, there is little knowledge on how human footprint and soil variability affect the potential distribution of IPS in different biomes. We used Maxent modeling to project the potential distribution of 29 IPS with wide distributions and long introduction histories in China based on various combinations of climatic correlates, soil characteristics and human footprint. Then, we evaluated the relative importance of each type of environmental variables (climate, soil and human footprint) as well as the difference in range and similarity of the potential distribution of IPS between different biomes. Human footprint and soil variables contributed to the prediction of the potential distribution of IPS, and different types of biomes had varying responses and degrees of impacts from the tested variables. Human footprint and soil variability had the highest tendency to increase the potential distribution of IPS in Montane Grasslands and Shrublands. We propose to integrate the assessment in impacts of human footprint and soil variability on the potential distribution of IPS in different biomes into the prevention and control of plant invasion.

  18. Patterns of water and heat flux across a biome gradient from tropical forest to savanna in Brazil

    NARCIS (Netherlands)

    Rocha, da H.R.; Manzi, A.O.; Cabral, O.M.; Miller, S.D.; Goulden, M.L.; Saleska, S.R.; Coupe, N.R.; Wofsy, S.C.; Borma, L.S.; Artaxo, P.; Vourlitis, G.; Nogueira, J.S.; Cardoso, F.L.; Nobre, A.D.; Kruijt, B.; Freitas, H.C.; Randow, von C.; Aguiar, R.G.; Maia, J.F.

    2009-01-01

    We investigated the seasonal patterns of water vapor and sensible heat flux along a tropical biome gradient from forest to savanna. We analyzed data from a network of flux towers in Brazil that were operated within the Large-Scale Biosphere-Atmosphere Experiment in Amazonia (LBA). These tower sites

  19. Validation of BIOMED-2 multiplex PCR tubes for detection of TCRB gene rearrangements in T-cell malignancies.

    NARCIS (Netherlands)

    Droese, J.; Langerak, A.W.; Groenen, P.J.T.A.; Bruggemann, M.; Neumann, P.; Wolvers-Tettero, I.L.M.; Altena, M.C. van; Kneba, M.; Dongen, J.J.M. van

    2004-01-01

    The BIOMED-2 Concerted Action BMH4-CT98-3936 on 'Polymerase chain reaction (PCR)-based clonality studies for early diagnosis of lymphoproliferative disorders' developed standardized PCR protocols for detection of immunoglobulin (Ig) and T-cell receptor (TCR) rearrangements, including TCR beta

  20. Data gaps in anthropogenically driven local-scale species richness change studies across the Earth's terrestrial biomes.

    Science.gov (United States)

    Murphy, Grace E P; Romanuk, Tamara N

    2016-05-01

    There have been numerous attempts to synthesize the results of local-scale biodiversity change studies, yet several geographic data gaps exist. These data gaps have hindered ecologist's ability to make strong conclusions about how local-scale species richness is changing around the globe. Research on four of the major drivers of global change is unevenly distributed across the Earth's biomes. Here, we use a dataset of 638 anthropogenically driven species richness change studies to identify where data gaps exist across the Earth's terrestrial biomes based on land area, future change in drivers, and the impact of drivers on biodiversity, and make recommendations for where future studies should focus their efforts. Across all drivers of change, the temperate broadleaf and mixed forests and the tropical moist broadleaf forests are the best studied. The biome-driver combinations we have identified as most critical in terms of where local-scale species richness change studies are lacking include the following: land-use change studies in tropical and temperate coniferous forests, species invasion and nutrient addition studies in the boreal forest, and warming studies in the boreal forest and tropics. Gaining more information on the local-scale effects of the specific human drivers of change in these biomes will allow for better predictions of how human activity impacts species richness around the globe.

  1. A method to determine warm and cool steppe biomes from pollen data; application to the Mediterranean and Kazakhstan regions

    NARCIS (Netherlands)

    Tarasov, PE; Cheddadi, R; Guiot, J; Bottema, S; Peyron, O; Belmonte, J; Ruiz-Sanchez, [No Value; Saadi, F; Brewer, S

    1998-01-01

    An objective method for the assignment of pollen spectra to appropriate biomes has been published recently. The aim of this paper is to improve the distinction between warm and cool steppes, thus refining vegetation and climate reconstruction, particularly during the Last Glacial Maximum. A set of

  2. Plant litter dynamics in the forest-stream interface: precipitation is a major control across tropical biomes.

    Science.gov (United States)

    Tonin, Alan M; Gonçalves, José F; Bambi, Paulino; Couceiro, Sheyla R M; Feitoza, Lorrane A M; Fontana, Lucas E; Hamada, Neusa; Hepp, Luiz U; Lezan-Kowalczuk, Vânia G; Leite, Gustavo F M; Lemes-Silva, Aurea L; Lisboa, Leonardo K; Loureiro, Rafael C; Martins, Renato T; Medeiros, Adriana O; Morais, Paula B; Moretto, Yara; Oliveria, Patrícia C A; Pereira, Evelyn B; Ferreira, Lidiane P; Pérez, Javier; Petrucio, Mauricio M; Reis, Deusiano F; S Rezende, Renan; Roque, Nadia; Santos, Luiz E P; Siegloch, Ana E; Tonello, Gabriela; Boyero, Luz

    2017-09-07

    Riparian plant litter is a major energy source for forested streams across the world and its decomposition has repercussions on nutrient cycling, food webs and ecosystem functioning. However, we know little about plant litter dynamics in tropical streams, even though the tropics occupy 40% of the Earth's land surface. Here we investigated spatial and temporal (along a year cycle) patterns of litter inputs and storage in multiple streams of three tropical biomes in Brazil (Atlantic forest, Amazon forest and Cerrado savanna), predicting major differences among biomes in relation to temperature and precipitation regimes. Precipitation explained most of litter inputs and storage, which were generally higher in more humid biomes (litterfall: 384, 422 and 308 g m -2 y -1 , storage: 55, 113 and 38 g m -2 , on average in Atlantic forest, Amazon and Cerrado, respectively). Temporal dynamics varied across biomes in relation to precipitation and temperature, with uniform litter inputs but seasonal storage in Atlantic forest streams, seasonal inputs in Amazon and Cerrado streams, and aseasonal storage in Amazon streams. Our findings suggest that litter dynamics vary greatly within the tropics, but point to the major role of precipitation, which contrasts with the main influence of temperature in temperate areas.

  3. Contribution à la biométhanisation de la biomasse végétale: cas des ...

    African Journals Online (AJOL)

    Contribution à la biométhanisation de la biomasse végétale: cas des résidus de légumes au Burkina Faso. Désiré Traore, Mahamadi Nikiema, Marius K. Somda, Joseph B. Sawadogo, Dianou Dayeri, Alfred S. Traore ...

  4. Carbon storage in permafrost and soils of the mammoth tundra-steppe biome: Role in the global carbon budget

    Science.gov (United States)

    Zimov, N. S.; Zimov, S. A.; Zimova, A. E.; Zimova, G. M.; Chuprynin, V. I.; Chapin, F. S.

    2009-01-01

    During the Last Glacial Maximum (LGM), atmospheric CO2 concentration was 80-100 ppmv lower than in pre-industrial times. At that time steppe-tundra was the most extensive biome on Earth. Some authors assume that C storage in that biome was very small, similar to today's deserts, and that the terrestrial carbon (C) reservoir increased at the Pleistocene-Holocene transition (PHT) by 400-1300 Gt. To estimate C storage in the entire steppe-tundra biome we used data of C storage in soils of this biome that persisted in permafrost of Siberia and Alaska and developed a model that describes C accumulation in soils and in permafrost. The model shows a slow but consistent C increase in soil when permafrost appears. At the PHT, C-rich frozen loess of Europe and South of Siberia thawed and lost most of its carbon. Soil carbon decreases as tundra-steppe changes to forest, steppes and tundra. As a result, over 1000 Gt C was released to the atmosphere, oceans, and other terrestrial ecosystems. The model results also show that restoring the tundra-steppe ecosystem would enhance soil C storage, while providing other important ecosystem services.

  5. Environmental history of the dry forest biome of Guerrero, Mexico, and human impact during the last c. 2700 years

    NARCIS (Netherlands)

    Berrio, J.C.; Hooghiemstra, H.; van Geel, B.; Ludlow-Wiegers, B.

    2006-01-01

    Two lake sediment cores from Madre del Sur mountain range, Guerrero State, west-central Mexico were studied to examine the past dynamics of the dry forest biome. Pollen, spores of coprophilous fungi, cyanobacteria and lithological changes are presented. The 390-cm Tixtla core (17°30′N, 99°24′W, 1400

  6. Microbial Community Profile and Water Quality in a Protected Area of the Caatinga Biome.

    Science.gov (United States)

    Lopes, Fabyano Alvares Cardoso; Catão, Elisa Caldeira Pires; Santana, Renata Henrique; Cabral, Anderson de Souza; Paranhos, Rodolfo; Rangel, Thiago Pessanha; de Rezende, Carlos Eduardo; Edwards, Robert A; Thompson, Cristiane C; Thompson, Fabiano L; Kruger, Ricardo Henrique

    2016-01-01

    The Caatinga is a semi-arid biome in northeast Brazil. The Paraguaçú River is located in the Caatinga biome, and part of its course is protected by the National Park of Chapada Diamantina (PNCD). In this study we evaluated the effect of PNCD protection on the water quality and microbial community diversity of this river by analyzing water samples obtained from points located inside and outside the PNCD in both wet and dry seasons. Results of water quality analysis showed higher levels of silicate, ammonia, particulate organic carbon, and nitrite in samples from the unprotected area compared with those from protected areas. Pyrosequencing of the 16S rRNA genes revealed that Burkholderiales was abundant in samples from all three sites during both seasons and was represented primarily by the genus Polynucleobacter and members of the Comamonadaceae family (e.g., genus Limnohabitans). During the dry season, the unprotected area showed a higher abundance of Flavobacterium sp. and Arthrobacter sp., which are frequently associated with the presence and/or degradation of arsenic and pesticide compounds. In addition, genes that appear to be related to agricultural impacts on the environment, as well as those involved in arsenic and cadmium resistance, copper homeostasis, and propanediol utilization, were detected in the unprotected areas by metagenomic sequencing. Although PNCD protection improves water quality, agricultural activities around the park may affect water quality within the park and may account for the presence of bacteria capable of pesticide degradation and assimilation, evidencing possible anthropogenic impacts on the Caatinga.

  7. Ética e investigación biomédica

    Directory of Open Access Journals (Sweden)

    Fernando Sánchez Torres

    2000-10-01

    Full Text Available Se hacen algunas consideraciones de carácter ético acerca de la ciencia y su cultor, el científico. La investigación biomédica, que toca directamente con los intereses más valiosos del hombre –su vida y su salud– tiene alcances fácticos de tanta trascendencia que han sumido en honda preocupación a teólogos, filósofos, políticos, juristas, y hasta a los mismos hombres de ciencia. De ahí que el investigador biomédico sea objeto de un cuidadoso seguimiento por parte de la sociedad, con miras a juzgar y cuestionar la validez ética de su trabajo. Con el objeto de proteger los derechos y el bienestar de los pacientes motivo de investigación se han dictado normas internacionales, a las cuales se hace referencia.The author reflects on science and its exponent, the scientist, from an ethical point of view. Biomedical research, which relates directly to the most valuable interests of humankind – life and health –, has such factual implications that it has plunged theologians, philosophers, politicians, jurists, and even men of science into deep preoccupation. Consequently, society has monitored biomedical researchers to judge and question the ethical validity of their job. In order to protect the rights and welfare of the patients who are participating in the research, many international regulations, which are mentioned here, have been enacted.

  8. General patterns of acclimation of leaf respiration to elevated temperatures across biomes and plant types.

    Science.gov (United States)

    Slot, Martijn; Kitajima, Kaoru

    2015-03-01

    Respiration is instrumental for survival and growth of plants, but increasing costs of maintenance processes with warming have the potential to change the balance between photosynthetic carbon uptake and respiratory carbon release from leaves. Climate warming may cause substantial increases of leaf respiratory carbon fluxes, which would further impact the carbon balance of terrestrial vegetation. However, downregulation of respiratory physiology via thermal acclimation may mitigate this impact. We have conducted a meta-analysis with data collected from 43 independent studies to assess quantitatively the thermal acclimation capacity of leaf dark respiration to warming of terrestrial plant species from across the globe. In total, 282 temperature contrasts were included in the meta-analysis, representing 103 species of forbs, graminoids, shrubs, trees and lianas native to arctic, boreal, temperate and tropical ecosystems. Acclimation to warming was found to decrease respiration at a set temperature in the majority of the observations, regardless of the biome of origin and growth form, but respiration was not completely homeostatic across temperatures in the majority of cases. Leaves that developed at a new temperature had a greater capacity for acclimation than those transferred to a new temperature. We conclude that leaf respiration of most terrestrial plants can acclimate to gradual warming, potentially reducing the magnitude of the positive feedback between climate and the carbon cycle in a warming world. More empirical data are, however, needed to improve our understanding of interspecific variation in thermal acclimation capacity, and to better predict patterns in respiratory carbon fluxes both within and across biomes in the face of ongoing global warming.

  9. Trans-biome diversity in Australian grass-specialist lizards (Diplodactylidae: Strophurus).

    Science.gov (United States)

    Laver, Rebecca J; Nielsen, Stuart V; Rosauer, Dan F; Oliver, Paul M

    2017-10-01

    Comparisons of biodiversity patterns within lineages that occur across major climate gradients and biomes, can provide insights into the relative roles that lineage history, landscape and climatic variation, and environmental change have played in shaping regional biotas. In Australia, while there has been extensive research into the origins and patterns of diversity in the Australian Arid Zone (AAZ), how diversity is distributed across this biome and the Australian Monsoonal Tropics (AMT) to the north, has been less studied. We compared the timing and patterns of diversification across this broad aridity gradient in a clade of lizards (Strophurus: phasmid geckos) that only occur in association with a unique Australian radiation of sclerophyllous grasses (Triodia: spinifex). Our results indicate that overall genetic diversity is much higher, older and more finely geographically structured within the AMT, including distantly related clades endemic to the sandstone escarpments of the Kimberley and Arnhem Plateau. Niche modelling analyses also suggest that the distribution of taxa in the AMT is more strongly correlated with variation in topographic relief than in the AAZ. The two broad patterns that we recovered - (i) lineage endemism increases as latitude decreases, and (ii) endemism is tightly correlated to rocky regions - parallel and corroborate other recent studies of habitat generalists and specialised saxicoline lineages occurring across these same regions. Early Miocene diversification estimates also suggest that, soon after Triodia grasses colonised Australia and began to diversify in the Miocene, phasmid geckos with Gondwanan ancestry shifted into these grasses, and have subsequently remained closely associated with this unique vegetation type. Copyright © 2017 Elsevier Inc. All rights reserved.

  10. Microbial Community Profile and Water Quality in a Protected Area of the Caatinga Biome.

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    Fabyano Alvares Cardoso Lopes

    Full Text Available The Caatinga is a semi-arid biome in northeast Brazil. The Paraguaçú River is located in the Caatinga biome, and part of its course is protected by the National Park of Chapada Diamantina (PNCD. In this study we evaluated the effect of PNCD protection on the water quality and microbial community diversity of this river by analyzing water samples obtained from points located inside and outside the PNCD in both wet and dry seasons. Results of water quality analysis showed higher levels of silicate, ammonia, particulate organic carbon, and nitrite in samples from the unprotected area compared with those from protected areas. Pyrosequencing of the 16S rRNA genes revealed that Burkholderiales was abundant in samples from all three sites during both seasons and was represented primarily by the genus Polynucleobacter and members of the Comamonadaceae family (e.g., genus Limnohabitans. During the dry season, the unprotected area showed a higher abundance of Flavobacterium sp. and Arthrobacter sp., which are frequently associated with the presence and/or degradation of arsenic and pesticide compounds. In addition, genes that appear to be related to agricultural impacts on the environment, as well as those involved in arsenic and cadmium resistance, copper homeostasis, and propanediol utilization, were detected in the unprotected areas by metagenomic sequencing. Although PNCD protection improves water quality, agricultural activities around the park may affect water quality within the park and may account for the presence of bacteria capable of pesticide degradation and assimilation, evidencing possible anthropogenic impacts on the Caatinga.

  11. A dated phylogeny and collection records reveal repeated biome shifts in the African genus Coccinia (Cucurbitaceae

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    Renner Susanne S

    2011-01-01

    Full Text Available Abstract Background Conservatism in climatic tolerance may limit geographic range expansion and should enhance the effects of habitat fragmentation on population subdivision. Here we study the effects of historical climate change, and the associated habitat fragmentation, on diversification in the mostly sub-Saharan cucurbit genus Coccinia, which has 27 species in a broad range of biota from semi-arid habitats to mist forests. Species limits were inferred from morphology, and nuclear and plastid DNA sequence data, using multiple individuals for the widespread species. Climatic tolerances were assessed from the occurrences of 1189 geo-referenced collections and WorldClim variables. Results Nuclear and plastid gene trees included 35 or 65 accessions, representing up to 25 species. The data revealed four species groups, one in southern Africa, one in Central and West African rain forest, one widespread but absent from Central and West African rain forest, and one that occurs from East Africa to southern Africa. A few individuals are differently placed in the plastid and nuclear (LFY trees or contain two ITS sequence types, indicating hybridization. A molecular clock suggests that the diversification of Coccinia began about 6.9 Ma ago, with most of the extant species diversity dating to the Pliocene. Ancestral biome reconstruction reveals six switches between semi-arid habitats, woodland, and forest, and members of several species pairs differ significantly in their tolerance of different precipitation regimes. Conclusions The most surprising findings of this study are the frequent biome shifts (in a relatively small clade over just 6 - 7 million years and the limited diversification during and since the Pleistocene. Pleistocene climate oscillations may have been too rapid or too shallow for full reproductive barriers to develop among fragmented populations of Coccinia, which would explain the apparently still ongoing hybridization between certain

  12. Site-level evaluation of satellite-based global terrestrial gross primary production and net primary production monitoring.

    Science.gov (United States)

    David P. Turner; William D. Ritts; Warren B. Cohen; Thomas K. Maeirsperger; Stith T. Gower; Al A. Kirschbaum; Steve W. Runnings; Maosheng Zhaos; Steven C. Wofsy; Allison L. Dunn; Beverly E. Law; John L. Campbell; Walter C. Oechel; Hyo Jung Kwon; Tilden P. Meyers; Eric E. Small; Shirley A. Kurc; John A. Gamon

    2005-01-01

    Operational monitoring of global terrestrial gross primary production (GPP) and net primary production (NPP) is now underway using imagery from the satellite-borne Moderate Resolution Imaging Spectroradiometer (MODIS) sensor. Evaluation of MODIS GPP and NPP products will require site-level studies across a range of biomes, with close attention to numerous scaling...

  13. Selection, isolation, and identification of fungi for bioherbicide production

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    Angélica Rossana Castro de Souza

    Full Text Available Abstract Production of a bioherbicide for biological control of weeds requires a series of steps, from selection of a suitable microbial strain to final formulation. Thus, this study aimed to select fungi for production of secondary metabolites with herbicidal activity using biological resources of the Brazilian Pampa biome. Phytopathogenic fungi were isolated from infected tissues of weeds in the Pampa biome. A liquid synthetic culture medium was used for production of metabolites. The phytotoxicity of fungal metabolites was assessed via biological tests using the plant Cucumis sativus L., and the most promising strain was identified by molecular analysis. Thirty-nine fungi were isolated, and 28 presented some phytotoxic symptoms against the target plant. Fungus VP51 belonging to the genus Diaporthe showed the most pronounced herbicidal activity. The Brazilian Pampa biome is a potential resource for the development of new and sustainable chemical compounds for modern agriculture.

  14. Future projections of fire danger in Brazilian biomes in the 21st century

    Science.gov (United States)

    Libonati, Renata; Silva, Patrícia; DaCamara, Carlos; Bastos, Ana

    2016-04-01

    In the global context, Brazil is one of the regions more severely affected by fire occurrences, with important consequences in the global CO2 balance, the state of the Amazon forest and the ecological diversity of the region. Brazil is also one of the few regions experiencing a raise in annual mean temperature above 2.5o during the 20th century, which may further increase between 2o and 7o until 2100 and, likely, be accompanied by a decrease in precipitation [1]. As the fire occurrence and severity largely depends on these two variables, it is worth assessing the evolution of fire danger for the coming decades. In order to obtain a detailed characterization of the future fire patterns in the different biomes of Brazil, we use outputs from a regional-downscaling of the EC-Earth climate model at 0.44 degrees spatial resolution for two future scenarios, an intermediate (RCP4.5) and a more severe (RCP8.5) one. We use a fire danger index specifically developed for the Brazilian climate and biome characteristics, the IFR from INPE. This index relies on values of maximum temperature, accumulated precipitation over different periods, minimum relative humidity and vegetation cover to estimate the likelihood of fire occurrence. We find a systematic increase of the days with critical fire risk, which is more pronounced in RCP8.5 and mostly affects months when fire activity takes place. Temperature increase is the most determinant factor for the increase in fire danger in the dry regions of savannah and shrubland, a result to be expected as fuel is already very dry. [1] Collins, M., R. Knutti, J. Arblaster, J.-L. Dufresne, T. Fichefet, P. Friedlingstein, X. Gao, W.J. Gutowski, T. Johns, G. Krinner, M. Shongwe, C. Tebaldi, A.J. Weaver and M. Wehner, 2013: Long-term Climate Change: Projections, Commitments and Irreversibility. In: Climate Change 2013: The Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on

  15. Structure of Drosophilidae Assemblage (Insecta, Diptera in Pampa Biome (São Luiz Gonzaga, RS

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    Jean Lucas Poppe

    2012-01-01

    Full Text Available The Brazilian Pampa (the southernmost end of the country is currently a highly modified environment because of increasing agricultural activities. In many places, only small parts of grasslands remain inside an agricultural landscape. Drosophilidae (Diptera have been widely used as a potential bioindicators to monitor the effects of anthropogenic changes in natural environments. However, the fauna of Drosophilidae in the Pampa Biome from natural and disturbed environments, still remains largely unknown. The present study represents one of the first attempts to fill this gap, showing results from monthly collections in the municipality of São Luiz Gonzaga (28º24'28"S, 54º57'39"W, in the Brazilian Pampa. A species inventory was carried out in two contrasting environments, an urban zone and a forest remnant (rural zone. In both areas banana-baited traps were used to capture adult drosophilids. The identification was made using external morphology and male terminalia. In total, 13,379 drosophilids were analyzed (rural zone: N = 8,812 and Sobs = 25; urban zone: N = 4,567 and Sobs = 16. In the present study, 16 (60% out of 26 species were found exclusively or preferentially in the forest. The period of highest richness was between the months of June to November (roughly winter and spring, and the period of lowest richness was from December to May (roughly summer and autumn. An analysis of cluster by the Coefficient of Jaccard showed that species composition slightly changes when the period of the year with higher temperatures (from January to May is compared with the period with lower temperatures (from June to October. The species abundances were also highly affected by seasonality, as revealed by the Morisita Index, since the samples clustered into similar groups in consecutive periods and in the same season, showing the seasonal preference of some species. The time component was a determinant in the diversity of the assemblage, surpassing the

  16. Assessing Effect of Manure and Chemical Fertilizer on Net Primary Production, Soil Respiration and Carbon Budget in Winter Wheat (Triticum aestivum L. Ecosystem under Mashhad Climatic Condition

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    Y alizade

    2018-02-01

    F2 and the lowest was observed in control plot with 5.1 and 5.2 for first and second years, respectively. The trend of CO2 flux as 250, 220, 200, 170, 160 and 155 mg C m-2 h-1 was gained in the F-M, M, F2, F1 and root-excluded plots, respectively. In general, manure treatments had the highest heterotrophic respiration. The highest of annual soil respiration and heterotrophic respiration were also in M-F treatment with 3257 and 1150 kgC ha-1 for the first year and 3310, 1250 kgC ha-1 in second year, respectively. The annual NPP was 5000 and 5000 kgC ha-1 year-1 for M-F, 5077 and 5100 kgC ha-1 year-1 in F1 and 2065 and 1865 kgC ha-1 year-1 for the control treatment in 2010 and 2011, respectively. The range of annual net biome production (NBP in the fertilizer and control treatments ranged from -400 to -150 kg C ha-1 year-1, suggesting the loss of carbon in the field. On the other hand, NBP in the M was 1400 and 1200 kgC ha-1 year-1 in 2010 and 2011, respectively and the M-F was 1300 and 1100 kgC ha-1 year-1 in 2010 and 2011, respectively. Conclusion The results of this experiment showed that in the wheat ecosystem, the carbon emission is higher than the carbon entry into the soil. The results also indicated that manure application in agro-ecosystems is a necessary approach to mitigate carbon losses in the winter wheat ecosystem and the results indicated a high correlation (> 0.9 between soil temperature and CO2 flux which was positive and exponential. Soil respiration increased under the influence of fertilizer treatments (both chemical fertilizer and manure but, the main reason for the increased soil respiration under application of chemical fertilizers was autotrophic respiration. While both respiration of autotrophic and heterotrophic increased in manure treatment.

  17. Licensing the future: report on BioMed Central's public consultation on open data in peer-reviewed journals.

    Science.gov (United States)

    Hrynaszkiewicz, Iain; Busch, Stefan; Cockerill, Matthew J

    2013-08-21

    We report the outcomes of BioMed Central's public consultation on implementing open data-compliant licensing in peer-reviewed open access journals. Respondents (42) to the 2012 consultation were six to one in favor (29 in support; 5 against; 8 abstentions) of changing our authors' default open access copyright license agreement, to introduce the Creative Commons CC0 public domain waiver for data published in BioMed Central's journals. We summarize the different questions we received in response to the consultation and our responses to them - matters such as citation, plagiarism, patient privacy, and commercial use were raised. In light of the support for open data in our journals we outline our plans to implement, in September 2013, a combined Creative Commons Attribution license for published articles (papers) and Creative Commons CC0 waiver for published data.

  18. L’identification biométrique : vers un nouveau contrôle social ?

    OpenAIRE

    Dubey, Gérard

    2011-01-01

    La biométrie se définit aujourd’hui comme la possibilité d’identifier sur la base de critères purement techniques un individu dans une masse et dans des flux. Elle est indissociable du processus d’informatisation de la société et de l’impéra­tif de traçabilité (des signes, des choses et aujourd’hui des êtres vivants) qu’im­pose le recouvrement du monde réel par son image numérique contrôlée et contrôlable. Le déploiement des dispositifs d’identification biométrique illustre ainsi la convergen...

  19. The beetle Costalimaita ferruginea (Coleoptera: Chysomelidae) in Eucalyptus plantations in transition area of Amazon and Cerrado Biomes.

    Science.gov (United States)

    Dias, T K R; Pires, E M; Souza, A P; Tanaka, A A; Monteiro, E B; Wilcken, C F

    2018-02-01

    Costalimaita ferruginea (Coleoptera: Chrysomelidae) attacks Eucalyptus plants causing severe damage through netting of the leaves. Recently, this Coleoptera has been reported attacking Myrtaceae in Mato Grosso State and, studies about the occurrence of this beetle in commercial plantations of eucalypts has been the subject of researchers through monitoring programmes in the forest protection area. With the beginning of the rainy season, adults were observed causing damage in eucalypt plantations in four cities that are part of the transition region of Amazon and Cerrado Biomes. The spots where these insects were observed are located in Feliz Natal, Lucas do Rio Verde, Sorriso and Vera. The purpose of this study was to report the new occurrences and to characterize the attack period of the beetle C. ferruginea in Eucalyptus plantations in Middle-North region of Mato Grosso State, region of Biomes Transition.

  20. PERMANENCE OF WATER EFFECTIVENESS IN THE ROOT ZONE OF THE CAATINGA BIOME

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    CARLOS ALEXANDRE GOMES COSTA

    2016-01-01

    Full Text Available Soil is an important water compartment into a watershed scale, mainly due to its role in providing water to plants and to the influence of antecedent moisture on the runoff initiation. The aim of this research is to assess the permanence of water effectiveness in the soil under preserved-vegetation constraints in the Caatinga biome, in the semiarid northeastern Brazil. For this purpose, hourly soil moisture measurements were collected with TDR and analyzed between 2003 and 2010 for three soil-vegetation associations in the Aiuaba Experimental Basin. The results showed that in nine months per year soil moisture was below wilting point for two associations, whose soils are Chromic Luvisol and Haplic Lixisol (Abruptic. In the third association, where the shallow soil Lithic Leptosol prevails, water was found non-effective four months per year. A possible reason for the high water permanence in the shallowest soil is the percolation process, generating sub-surface flow, which barely occurs in the deeper soils. In situ observations indicates that the long period of soil moisture below the wilting point was not enough to avoid the blooming season of the Caatinga vegetation during the rainy periods. Indeed, after the beginning of each rainy season, there is a growth of dense green vegetation, regardless of the long period under water shortage.

  1. Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database.

    Science.gov (United States)

    Bissett, Andrew; Fitzgerald, Anna; Meintjes, Thys; Mele, Pauline M; Reith, Frank; Dennis, Paul G; Breed, Martin F; Brown, Belinda; Brown, Mark V; Brugger, Joel; Byrne, Margaret; Caddy-Retalic, Stefan; Carmody, Bernie; Coates, David J; Correa, Carolina; Ferrari, Belinda C; Gupta, Vadakattu V S R; Hamonts, Kelly; Haslem, Asha; Hugenholtz, Philip; Karan, Mirko; Koval, Jason; Lowe, Andrew J; Macdonald, Stuart; McGrath, Leanne; Martin, David; Morgan, Matt; North, Kristin I; Paungfoo-Lonhienne, Chanyarat; Pendall, Elise; Phillips, Lori; Pirzl, Rebecca; Powell, Jeff R; Ragan, Mark A; Schmidt, Susanne; Seymour, Nicole; Snape, Ian; Stephen, John R; Stevens, Matthew; Tinning, Matt; Williams, Kristen; Yeoh, Yun Kit; Zammit, Carla M; Young, Andrew

    2016-01-01

    Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The 'Biomes of Australian Soil Environments' (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function. BASE currently provides amplicon sequences and associated contextual data for over 900 sites encompassing all Australian states and territories, a wide variety of bioregions, vegetation and land-use types. Amplicons target bacteria, archaea and general and fungal-specific eukaryotes. The growing database will soon include metagenomics data. Data are provided in both raw sequence (FASTQ) and analysed OTU table formats and are accessed via the project's data portal, which provides a user-friendly search tool to quickly identify samples of interest. Processed data can be visually interrogated and intersected with other Australian diversity and environmental data using tools developed by the 'Atlas of Living Australia'. Developed within an open data framework, the BASE project is the first Australian soil microbial diversity database. The database will grow and link to other global efforts to explore microbial, plant, animal, and marine biodiversity. Its design and open access nature ensures that BASE will evolve as a valuable tool for documenting an often overlooked component of biodiversity and the many microbe-driven processes that are essential to sustain soil function and ecosystem services.

  2. Local climatic conditions constrain soil yeast diversity patterns in Mediterranean forests, woodlands and scrub biome.

    Science.gov (United States)

    Yurkov, Andrey M; Röhl, Oliver; Pontes, Ana; Carvalho, Cláudia; Maldonado, Cristina; Sampaio, José Paulo

    2016-02-01

    Soil yeasts represent a poorly known fraction of the soil microbiome due to limited ecological surveys. Here, we provide the first comprehensive inventory of cultivable soil yeasts in a Mediterranean ecosystem, which is the leading biodiversity hotspot for vascular plants and vertebrates in Europe. We isolated and identified soil yeasts from forested sites of Serra da Arrábida Natural Park (Portugal), representing the Mediterranean forests, woodlands and scrub biome. Both cultivation experiments and the subsequent species richness estimations suggest the highest species richness values reported to date, resulting in a total of 57 and 80 yeast taxa, respectively. These values far exceed those reported for other forest soils in Europe. Furthermore, we assessed the response of yeast diversity to microclimatic environmental factors in biotopes composed of the same plant species but showing a gradual change from humid broadleaf forests to dry maquis. We observed that forest properties constrained by precipitation level had strong impact on yeast diversity and on community structure and lower precipitation resulted in an increased number of rare species and decreased evenness values. In conclusion, the structure of soil yeast communities mirrors the environmental factors that affect aboveground phytocenoses, aboveground biomass and plant projective cover. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  3. SOIL COVER AND CHEMICAL AND PHYSICAL ATTRIBUTES IN OXISOL IN THE ATLANTIC FOREST BIOME

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    Ana Paula Almeida Bertossi

    2016-04-01

    Full Text Available ABSTRACT The objective of this study was to evaluate the chemical and physical attributes of different soil cover in a Oxisol with a strong wavy relief in the Atlantic Forest Biome, in which were selected three watersheds, employed with grazing (watershed P, forest (watershed M and coffee (watershed C. Deformed and not deformed samples were collected in three depths for physical and chemical characterization. The chemical characteristics of soil in different watershed studies presented low levels of fertility. It was observed an elevation of pH in the soil and contents of Ca2+ and Mg2+ in the watersheds P and C in relation to the watershed M. Due to deforestation and the establishment of agriculture and livestock, there was a decrease in the contents of soil organic matter in the watershed P and C, not altering the physical characteristics of the soil in the watershed P. The implementation of coffee plantation is causing a reduction in the soil quality of watershed C in comparison to the watershed P and M, therefore indicating a need to adequate soil management in this area.

  4. Soil Loss Vulnerability in an Agricultural Catchment in the Atlantic Forest Biome in Southern Brazil

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    Rafael Gotardo

    2016-11-01

    Full Text Available This study estimates soil loss vulnerability using field samples and spatial data in a 30 km² area in the Atlantic forest biome in southern Brazil. The anthropogenic part of the landscape consists mainly of small agricultural properties. Soil loss vulnerability was calculated using adaptations of the universal soil loss equation. The results were compared to sediment data collected during field surveys. Spatial analysis was performed using a geographical information system (GIS and fine resolution data (1 m. Both field and spatial analyses produced similar results, 5.390 tons of soil loss per year using field data and 5.691 tons per year using GIS. Using soil loss and sediment data related to the Concordia River, we estimate that of all the exported sediment 25% of the lost soil reaches the river. These data are an effective source of information for municipal administrators of the region, which consists of small agricultural catchments (dominated by small properties that comprise the regional economy. A thematic map was used to determine sub-drainage priority as information for public managers.

  5. Nodulation and nitrogen fixation by Mimosa spp. in the Cerrado and Caatinga biomes of Brazil.

    Science.gov (United States)

    dos Reis, Fábio Bueno; Simon, Marcelo F; Gross, Eduardo; Boddey, Robert M; Elliott, Geoffrey N; Neto, Nicolau E; Loureiro, M de Fatima; de Queiroz, Luciano P; Scotti, Maria Rita; Chen, Wen-Ming; Norén, Agneta; Rubio, Maria C; de Faria, Sergio M; Bontemps, Cyril; Goi, Silvia R; Young, J Peter W; Sprent, Janet I; James, Euan K

    2010-06-01

    *An extensive survey of nodulation in the legume genus Mimosa was undertaken in two major biomes in Brazil, the Cerrado and the Caatinga, in both of which there are high degrees of endemicity of the genus. *Nodules were collected from 67 of the 70 Mimosa spp. found. Thirteen of the species were newly reported as nodulating. Nodules were examined by light and electron microscopy, and all except for M. gatesiae had a structure typical of effective Mimosa nodules. The endosymbiotic bacteria in nodules from all of the Mimosa spp. were identified as Burkholderia via immunolabelling with an antibody against Burkholderia phymatum STM815. *Twenty of the 23 Mimosa nodules tested were shown to contain nitrogenase by immunolabelling with an antibody to the nitrogenase Fe- (nifH) protein, and using the delta(15)N ((15)N natural abundance) technique, contributions by biological N(2) fixation of up to 60% of total plant N were calculated for Caatinga Mimosa spp. *It is concluded that nodulation in Mimosa is a generic character, and that the preferred symbionts of Brazilian species are Burkholderia. This is the first study to demonstrate N(2) fixation by beta-rhizobial symbioses in the field.

  6. SOIL ORGANIC MATTER FRACTIONS IN PRESERVED AND DISTURBED WETLANDS OF THE CERRADO BIOME

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    Ricardo Fernandes de Sousa

    2015-02-01

    Full Text Available Veredas are humid tropical ecosystems, generally associated to hydromorphic soils and a shallow water table. The soils of these ecosystems are affected by the use of the areas around these veredas. The objective of this study was to determine soil organic matter (SOM fractions in veredas adjacent to preserved (native savanna and disturbed environments (agricultural areas and pastures in the Cerrado biome. Soil samples were collected from the 0-10 and 10-20 cm layers along reference lines drawn along the relief following the upper, middle and lower positions of one of the slopes, in the direction of the draining line of the vereda. The soil analysis determined: total soil OC, total nitrogen and C:N ratio; C and N contents and C:N ratio in particulate and mineral-associated fractions (of SOM; fulvic acids, humic acids and humin fractions and ratio between humic and fulvic acids. The agricultural use around the veredas induced changes in the SOM fractions, more pronounced in the lower part of the slope. In the soil surface of this part, the OC levels in the humic substances and the particulate fraction of SOM, as well as total soil OC were reduced in the vereda next to crop fields.

  7. Minisuíno (minipig na pesquisa biomédica experimental: o Minipig br1

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    Mariano Mario

    2003-01-01

    Full Text Available Diferentes espécies de animais vertebrados e invertebrados têm sido usados em investigação biomédica experimental. Neste trabalho é apresentada uma breve revisão sobre o uso do suíno em pesquisa biomedica e sobre as similaridades da anatomia, fisiologia, bioquímica e imunologia desta espécie com aquelas do homem. É também revisto o desenvolvimento do minipig nos anos 60 e os sucessos obtidos com este modelo animal nas mais diversas áreas da medicina experimental. Finalmente, são descritas as características básicas de uma colônia de minipigs desenvolvida pelo autor (Minipig br1. São descritas as condições de alimentação desses animais, como são mantidos, vacinados e selecionados. Pesam de 10-15 quilos com seis meses de idade e de 30-37 quilos com onze meses. A possível contribuição desse modelo animal para o desenvolvimento da cirurgia experimental e para outras áreas de experimentação animal no país é discutida.

  8. Termite assemblages in five semideciduous Atlantic Forest fragments in the northern coastland limit of the biome

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    Heitor Bruno de Araújo Souza

    2012-03-01

    Full Text Available Termites are abundant organisms in tropical ecosystems and strongly influence the litter decomposition and soil formation. Despite their importance, few studies about their assemblage structures have been made in Brazilian Atlantic Forest fragments, especially in the area located north of the São Francisco River. This study aims to analyze the assemblage composition of five Atlantic Forest fragments located in the northern biome limit along the Brazilian coast. A standardized sampling protocol of termites was applied in each fragment. Thirty-three termite species belonging to twenty genera and three families were found in the forest fragments. The wood-feeder group was dominant both concerning to species richness and number of encounters in all areas. In sites northern to 7°S, there is an evident simplification of the termite assemblage composition regarding species richness and number of encounters by feeding group. This fact is apparently due to a higher sandy level in soils and to semideciduous character of the vegetation in the northern fragments. Thus, even on the north of São Francisco River, termite biodiversity is heterogeneously spread with highest density of species in the portion between 07°S and São Francisco River mouth (10°29'S.

  9. Himalayan uplift shaped biomes in Miocene temperate Asia: evidence from leguminous Caragana.

    Science.gov (United States)

    Zhang, Ming-Li; Xiang, Xiao-Guo; Xue, Juan-Juan; Sanderson, Stewart C; Fritsch, Peter W

    2016-11-09

    Caragana, with distinctive variation in leaf and rachis characters, exhibits three centers of geographic distribution, i.e., Central Asia, the Qinghai-Tibetan Plateau (QTP), and East Asia, corresponding to distinct biomes. Because Caragana species are often ecologically dominant components of the vegetation in these regions, it is regarded as a key taxon for the study of floristic evolution in the dry regions of temperate Asia. Based on an expanded data set of taxa and gene regions from those previously generated, we employed molecular clock and biogeographical analyses to infer the evolutionary history of Caragana and link it to floristic patterns, paleovegetation, and paleoclimate. Results indicate that Caragana is of arid origin from the Junggar steppe. Diversification of crown group Caragana, dated to the early Miocene ca. 18 Ma and onwards, can be linked to the Himalayan Motion stage of QTP uplift. Diversification of the major clades in the genus corresponding to taxonomic sections and morphological variation is inferred to have been driven by the uplift, as well as Asian interior aridification and East Asian monsoon formation, in the middle to late Miocene ca. 12~6 Ma. These findings demonstrate a synchronous evolution among floristics, vegetation and climate change in arid Central Asia, cold arid alpine QTP, and mesophytic East Asia.

  10. Amblyomma sculptum: genetic diversity and rickettsias in the Brazilian Cerrado biome.

    Science.gov (United States)

    Bitencourth, K; Amorim, M; DE Oliveira, S V; Caetano, R L; Voloch, C M; Gazêta, G S

    2017-12-01

    Amblyomma sculptum (Ixodida: Ixodidae) Berlese, 1888 is the most important tick vector in Brazil, transmitting the bioagent of the most severe form of spotted fever (SF) in part of the Cerrado (in the states of Minas Gerais and São Paulo). In another part of the Cerrado (Central-West region of Brazil), a milder form of SF has been recorded. However, neither the rickettsia nor the vector involved have been characterized. The aim of the current study was to analyse genetic variation and the presence of rickettsia in A. sculptum in Cerrado, from silent areas and with the milder form of SF. Samples were subjected to DNA extraction, amplification and sequencing of 12S rDNA, cytochrome oxidase subunit II and D-loop mitochondrial genes (for tick population analyses), and gltA, htrA, ompA and gene D (sca4) genes for rickettsia researches. Exclusive haplotypes with low frequencies, high haplotype diversity and low nucleotide diversity, star-shaped networks and significant results in neutrality tests indicate A. sculptum population expansions in some areas. Rickettsia amblyommatis, Candidatus Rickettsia andeanae and Rickettsia felis were detected. The A. sculptum diversity is not geographically, or biome delimited, pointing to a different potential in vector capacity, possibly associated with differing tick genetic profiles. © 2017 The Royal Entomological Society.

  11. Soil respiration at mean annual temperature predicts annual total across vegetation types and biomes

    Science.gov (United States)

    Bahn, M.; Reichstein, M.; Davidson, E. A.; Grünzweig, J.; Jung, M.; Carbone, M. S.; Epron, D.; Misson, L.; Nouvellon, Y.; Roupsard, O.; Savage, K.; Trumbore, S. E.; Gimeno, C.; Yuste, J. Curiel; Tang, J.; Vargas, R.; Janssens, I. A.

    2011-01-01

    Soil respiration (SR) constitutes the largest flux of CO2 from terrestrial ecosystems to the atmosphere. However, there still exist considerable uncertainties as to its actual magnitude, as well as its spatial and interannual variability. Based on a reanalysis and synthesis of 80 site-years for 57 forests, plantations, savannas, shrublands and grasslands from boreal to tropical climates we present evidence that total annual SR is closely related to SR at mean annual soil temperature (SRMAT), irrespective of the type of ecosystem and biome. This is theoretically expected for non water-limited ecosystems within most of the globally occurring range of annual temperature variability and sensitivity (Q10). We further show that for seasonally dry sites where annual precipitation (P) is lower than potential evapotranspiration (PET), annual SR can be predicted from wet season SRMAT corrected for a factor related to P/PET. Our finding indicates that it can be sufficient to measure SRMAT for obtaining a well constrained estimate of its annual total. This should substantially increase our capacity for assessing the spatial distribution of soil CO2 emissions across ecosystems, landscapes and regions, and thereby contribute to improving the spatial resolution of a major component of the global carbon cycle. PMID:23293656

  12. Evaluation of mutagenic and antimicrobial properties of brown propolis essential oil from the Brazilian Cerrado biome

    Directory of Open Access Journals (Sweden)

    Fábio H. Fernandes

    2015-01-01

    Full Text Available Biological, and particularly antimicrobial, activities have been demonstrated for the essential oil of propolis samples worlwide, yet their mutagenic effects remain unknown. To correlate antimicrobial effects with mutagenic risks, the present study evaluated the antifungal and antibacterial activities of the essential oil obtained from brown propolis collected from the Cerrado biome in Midwest Brazil (EOP, testing it against nine pathogenic microorganisms. Evaluation of mutagenic potential was based on the somatic mutation and recombination test (SMART performed on wing cells of standard (ST and high-bioactivation (HB crosses of Drosophila melanogaster. EOP was extracted by hydrodistillation, and sesquiterpenes were characterized by GC–MS as its major constituents. The crude oil proved active against Cryptococcus neoformans and Enterococcus faecalis, as did two of its major constituents, spathulenol and (E-nerolidol – the latter being also active against Staphylococcus aureus – isolated using chromatographic procedures. No significant increase in the number of somatic mutations was observed in the offspring of ST or HB crosses – the latter exhibiting enhanced levels of metabolizing enzymes of the cytochrome P450 type – treated with 0.05%, 0.1%, and 0.2% EOP. These findings revealed no mutagenic activity of EOP, even when tested against the HB strain, and demonstrated that its antimicrobial activities are not associated with DNA damage induction (investigated with SMART, suggesting the potential of EOP as a natural preservative.

  13. Ornamental Eudicotyledons from grasslands of Pampa biome in Rio Grande do Sul

    Directory of Open Access Journals (Sweden)

    Ana De Araújo Carrion

    2012-10-01

    Full Text Available The present study aims at investigating the group of Eudicotyledons native plants with ornamental potential of grasslands from the Pampa biome in the south of Brazil. The Pampa presents a high level of biodiversity; however, it requires studies related to the richness of vascular plants and its biological and ecological knowledge. The purpose of this work is to elaborate a preliminary inventory of this group of plants, analyzing the ornamental potential of each specie and indicating those that could be considered as being priorities for the purpose of sustainable use with this objective. Some grassland species were selected through the search for information in herbarium registers, national and international works about decorative plants, floristic surveys, besides the authors´ practical knowledge. Some parameters and values were associated, aiming at reducing the subjectivity of the choice. The survey resulted in a list of 177 species distributed in 36 families and 101 genera. Among these species, ten presented high ornamental potential. These data show that the richness of the grassland native ornamental flora is high, even though its use is poorly known. The use of these plants, if in a sustainable manner, can produce economic and ecological benefits.

  14. Soil respiration at mean annual temperature predicts annual total across vegetation types and biomes

    Directory of Open Access Journals (Sweden)

    M. Bahn

    2010-07-01

    Full Text Available Soil respiration (SR constitutes the largest flux of CO2 from terrestrial ecosystems to the atmosphere. However, there still exist considerable uncertainties as to its actual magnitude, as well as its spatial and interannual variability. Based on a reanalysis and synthesis of 80 site-years for 57 forests, plantations, savannas, shrublands and grasslands from boreal to tropical climates we present evidence that total annual SR is closely related to SR at mean annual soil temperature (SRMAT, irrespective of the type of ecosystem and biome. This is theoretically expected for non water-limited ecosystems within most of the globally occurring range of annual temperature variability and sensitivity (Q10. We further show that for seasonally dry sites where annual precipitation (P is lower than potential evapotranspiration (PET, annual SR can be predicted from wet season SRMAT corrected for a factor related to P/PET. Our finding indicates that it can be sufficient to measure SRMAT for obtaining a well constrained estimate of its annual total. This should substantially increase our capacity for assessing the spatial distribution of soil CO2 emissions across ecosystems, landscapes and regions, and thereby contribute to improving the spatial resolution of a major component of the global carbon cycle.

  15. Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study.

    Science.gov (United States)

    Crowther, Thomas W; Maynard, Daniel S; Leff, Jonathan W; Oldfield, Emily E; McCulley, Rebecca L; Fierer, Noah; Bradford, Mark A

    2014-09-01

    The consequences of deforestation for aboveground biodiversity have been a scientific and political concern for decades. In contrast, despite being a dominant component of biodiversity that is essential to the functioning of ecosystems, the responses of belowground biodiversity to forest removal have received less attention. Single-site studies suggest that soil microbes can be highly responsive to forest removal, but responses are highly variable, with negligible effects in some regions. Using high throughput sequencing, we characterize the effects of deforestation on microbial communities across multiple biomes and explore what determines the vulnerability of microbial communities to this vegetative change. We reveal consistent directional trends in the microbial community response, yet the magnitude of this vegetation effect varied between sites, and was explained strongly by soil texture. In sandy sites, the difference in vegetation type caused shifts in a suite of edaphic characteristics, driving substantial differences in microbial community composition. In contrast, fine-textured soil buffered microbes against these effects and there were minimal differences between communities in forest and grassland soil. These microbial community changes were associated with distinct changes in the microbial catabolic profile, placing community changes in an ecosystem functioning context. The universal nature of these patterns allows us to predict where deforestation will have the strongest effects on soil biodiversity, and how these effects could be mitigated. © 2014 John Wiley & Sons Ltd.

  16. Comment on Chiesi et al. (2011): “Use of BIOME-BGC to simulate Mediterranean forest carbon stocks”

    OpenAIRE

    Eastaugh CS

    2011-01-01

    The mechanistic forest growth model BIOME-BGC utilizes a “spin-up” procedure to estimate site parameters for forests in a steady-state condition, as they may have been expected to be prior to anthropogenic influence. Forests in this condition have no net growth, as living biomass accumulation is balanced by mortality. To simulate current ecosystems it is necessary to reset the model to reflect a forest of the correct development stage. The alternative approach of simply post-adjus...

  17. Plant litter dynamics in the forest-stream interface: precipitation is a major control across tropical biomes

    OpenAIRE

    Tonin, Alan M.; Gon?alves, Jos? F.; Bambi, Paulino; Couceiro, Sheyla R. M.; Feitoza, Lorrane A. M.; Fontana, Lucas E.; Hamada, Neusa; Hepp, Luiz U.; Lezan-Kowalczuk, V?nia G.; Leite, Gustavo F. M.; Lemes-Silva, Aurea L.; Lisboa, Leonardo K.; Loureiro, Rafael C.; Martins, Renato T.; Medeiros, Adriana O.

    2017-01-01

    Riparian plant litter is a major energy source for forested streams across the world and its decomposition has repercussions on nutrient cycling, food webs and ecosystem functioning. However, we know little about plant litter dynamics in tropical streams, even?though the tropics occupy 40% of the Earth?s land surface. Here we investigated spatial and temporal (along a year cycle) patterns of litter inputs and storage in multiple streams of three tropical biomes in Brazil (Atlantic forest, Ama...

  18. A reconstruction of Atlantic Central African biomes and forest succession stages derived from modern pollen data and plant functional types

    OpenAIRE

    J. Lebamba; A. Ngomanda; A. Vincens; D. Jolly; C. Favier; H. Elenga; I. Bentaleb

    2009-01-01

    New detailed vegetation reconstructions are proposed in Atlantic Central Africa from a modern pollen data set derived from 199 sites (Cameroon, Gabon and Congo) including 131 new sites. In this study, the concept of plant functional classification is improved with new and more detailed plant functional types (PFTs) and new aggregations of pollen taxa. Using the biomisation method, we reconstructed (1) modern potential biomes and (2) potential succession stages of forest regeneration, a...

  19. Pensando o processo saúde doença: a que responde o modelo biomédico?

    Directory of Open Access Journals (Sweden)

    José Augusto C. Barros

    Full Text Available Com o propósito de efetuar uma crítica ao modelo biomédico, mecanicista, hegemônico na doutrina e prática que informa a medicina na atualidade, o texto parte de uma síntese histórico-evolutiva que contempla a apresentaçao das idéias e personagens chave que caracterizariam os quatro paradigmas ou modelos que, ao longo do tempo, precederam o modelo sob estudo. Em seguida discorre, efetuando uma análise crítica, sobre o fenômeno da medicalizaçao, consequência e estímulo ao mesmo tempo para a hegemonia do modelo biomédico, contextualizando-a, brevemente, na sociedade de consumo, sob o império da lógica de mercado, tomando a questao dos medicamentos como exemplo das distorçoes advindas do incremento da medicalização e dos fatores a ela subjacentes. Ao final, comenta-se a respeito das limitações no alcance da desejada interferência positiva da medicina, uma vez feita a opção pelo modelo biomédico.

  20. Tree mortality across biomes is promoted by drought intensity, lower wood density and higher specific leaf area

    Science.gov (United States)

    Greenwood, Sarah; Ruiz-Benito, Paloma; Martinez-Vilalta, Jordi; Lloret, Francisco; Kitzberger, Thomas; Allen, Craig D.; Fensham, Rod; Laughlin, Daniel C.; Kattge, Jens; Bönisch, Gerhard; Kraft, Nathan J. B.; Jump, Alistair S.

    2017-01-01

    Drought events are increasing globally, and reports of consequent forest mortality are widespread. However, due to a lack of a quantitative global synthesis, it is still not clear whether drought-induced mortality rates differ among global biomes and whether functional traits influence the risk of drought-induced mortality. To address these uncertainties, we performed a global meta-analysis of 58 studies of drought-induced forest mortality. Mortality rates were modelled as a function of drought, temperature, biomes, phylogenetic and functional groups and functional traits. We identified a consistent global-scale response, where mortality increased with drought severity [log mortality (trees trees−1 year−1) increased 0.46 (95% CI = 0.2–0.7) with one SPEI unit drought intensity]. We found no significant differences in the magnitude of the response depending on forest biomes or between angiosperms and gymnosperms or evergreen and deciduous tree species. Functional traits explained some of the variation in drought responses between species (i.e. increased from 30 to 37% when wood density and specific leaf area were included). Tree species with denser wood and lower specific leaf area showed lower mortality responses. Our results illustrate the value of functional traits for understanding patterns of drought-induced tree mortality and suggest that mortality could become increasingly widespread in the future.

  1. Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa.

    Science.gov (United States)

    Corbelli, Julian Martin; Zurita, Gustavo Andres; Filloy, Julieta; Galvis, Juan Pablo; Vespa, Natalia Isabel; Bellocq, Isabel

    2015-01-01

    The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD), functional (FBD) and phylogenetic (PBD) facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools) and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants) from two contrasting biomes (subtropical forest and grassland) and land uses (tree plantations and cropfields) in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland), and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation.

  2. A checklist of spiders from Sovenga Hill, an inselberg in the Savanna Biome, Limpopo Province, South Africa (Arachnida: Araneae

    Directory of Open Access Journals (Sweden)

    M.A. Modiba

    2005-12-01

    Full Text Available The South African National Survey of Arachnida (SANSA was initiated to make an inventory of the arachnid fauna of South Africa. Various projects are underway to prepare inventories of the spider fauna of the different floral biomes and provinces of South Africa. During April and May 2004 five different collecting methods were sed to sample spiders from four slopes on Sovenga Hill, an inselberg situated in the Savanna Biome, near Polokwane, in the Limpopo Province of South Africa. A total of 793 specimens represented by 29 families, 62 genera and 76 species were recorded over the twomonth period. The Thomisidae was the most abundant (n = 167 representing 21.1 % of all spiders sampled, followed by the Gnaphosidae (n = 101 with 12.7 % and the Lycosidae (n = 77 with 9.7 %. The most abundant species was a thomisid Tmarus comellini Garcia-Neto (n = 82, representing 10.3 % of the total, followed by a clubionid Clubiona godfreyi Lessert (n = 66 with 8.3 %. The Thomisidae was the most species-rich family with 12 species, followed by the Gnaphosidae with 11 species and the Araneidae with 10 species. Of the species collected 83.9 % were wandering spiders and 16.1 % web builders. This is the first quantitative survey of the Savanna Biome in the Polokwane area.

  3. Modeling the Ecosystem Services Provided by Trees in Urban Ecosystems: Using Biome-BGC to Improve i-Tree Eco

    Science.gov (United States)

    Brown, Molly E.; McGroddy, Megan; Spence, Caitlin; Flake, Leah; Sarfraz, Amna; Nowak, David J.; Milesi, Cristina

    2012-01-01

    As the world becomes increasingly urban, the need to quantify the effect of trees in urban environments on energy usage, air pollution, local climate and nutrient run-off has increased. By identifying, quantifying and valuing the ecological activity that provides services in urban areas, stronger policies and improved quality of life for urban residents can be obtained. Here we focus on two radically different models that can be used to characterize urban forests. The i-Tree Eco model (formerly UFORE model) quantifies ecosystem services (e.g., air pollution removal, carbon storage) and values derived from urban trees based on field measurements of trees and local ancillary data sets. Biome-BGC (Biome BioGeoChemistry) is used to simulate the fluxes and storage of carbon, water, and nitrogen in natural environments. This paper compares i-Tree Eco's methods to those of Biome-BGC, which estimates the fluxes and storage of energy, carbon, water and nitrogen for vegetation and soil components of the ecosystem. We describe the two models and their differences in the way they calculate similar properties, with a focus on carbon and nitrogen. Finally, we discuss the implications of further integration of these two communities for land managers such as those in Maryland.

  4. Tree mortality across biomes is promoted by drought intensity, lower wood density and higher specific leaf area.

    Science.gov (United States)

    Greenwood, Sarah; Ruiz-Benito, Paloma; Martínez-Vilalta, Jordi; Lloret, Francisco; Kitzberger, Thomas; Allen, Craig D; Fensham, Rod; Laughlin, Daniel C; Kattge, Jens; Bönisch, Gerhard; Kraft, Nathan J B; Jump, Alistair S

    2017-04-01

    Drought events are increasing globally, and reports of consequent forest mortality are widespread. However, due to a lack of a quantitative global synthesis, it is still not clear whether drought-induced mortality rates differ among global biomes and whether functional traits influence the risk of drought-induced mortality. To address these uncertainties, we performed a global meta-analysis of 58 studies of drought-induced forest mortality. Mortality rates were modelled as a function of drought, temperature, biomes, phylogenetic and functional groups and functional traits. We identified a consistent global-scale response, where mortality increased with drought severity [log mortality (trees trees -1  year -1 ) increased 0.46 (95% CI = 0.2-0.7) with one SPEI unit drought intensity]. We found no significant differences in the magnitude of the response depending on forest biomes or between angiosperms and gymnosperms or evergreen and deciduous tree species. Functional traits explained some of the variation in drought responses between species (i.e. increased from 30 to 37% when wood density and specific leaf area were included). Tree species with denser wood and lower specific leaf area showed lower mortality responses. Our results illustrate the value of functional traits for understanding patterns of drought-induced tree mortality and suggest that mortality could become increasingly widespread in the future. © 2017 John Wiley & Sons Ltd/CNRS.

  5. Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa

    Science.gov (United States)

    Corbelli, Julian Martin; Zurita, Gustavo Andres; Filloy, Julieta; Galvis, Juan Pablo; Vespa, Natalia Isabel; Bellocq, Isabel

    2015-01-01

    The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD), functional (FBD) and phylogenetic (PBD) facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools) and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants) from two contrasting biomes (subtropical forest and grassland) and land uses (tree plantations and cropfields) in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland), and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation. PMID:25978319

  6. Seeking potential contributions to future carbon budget in conterminous US forests considering disturbances

    Science.gov (United States)

    Zhang, Fangmin; Pan, Yude; Birdsey, Richard A.; Chen, Jing M.; Dugan, Alexa

    2017-11-01

    Currently, US forests constitute a large carbon sink, comprising about 9 % of the global terrestrial carbon sink. Wildfire is the most significant disturbance influencing carbon dynamics in US forests. Our objective is to estimate impacts of climate change, CO2 concentration, and nitrogen deposition on the future net biome productivity (NBP) of US forests until the end of twenty-first century under a range of disturbance conditions. We designate three forest disturbance scenarios under one future climate scenario to evaluate factor impacts for the future period (2011-2100): (1) no wildfires occur but forests continue to age (Saging), (2) no wildfires occur and forest ages are fixed in 2010 (Sfixed_nodis), and (3) wildfires occur according to a historical pattern, consequently changing forest age (Sdis_age_change). Results indicate that US forests remain a large carbon sink in the late twenty-first century under the Sfixed_nodis scenario; however, they become a carbon source under the Saging and Sdis_age_change scenarios. During the period of 2011 to 2100, climate is projected to have a small direct effect on NBP, while atmospheric CO2 concentration and nitrogen deposition have large positive effects on NBP regardless of the future climate and disturbance scenarios. Meanwhile, responses to past disturbances under the Sfixed_nodis scenario increase NBP regardless of the future climate scenarios. Although disturbance effects on NBP under the Saging and Sdis_age_change scenarios decrease with time, both scenarios experience an increase in NBP prior to the 2050s and then a decrease in NBP until the end of the twenty-first century. This study indicates that there is potential to increase or at least maintain the carbon sink of conterminous US forests at the current level if future wildfires are reduced and age structures are maintained at a productive mix. The effects of CO2 on the future carbon sink may overwhelm effects of other factors at the end of the twenty

  7. Spatial Distribution of Aboveground Carbon Stock of the Arboreal Vegetation in Brazilian Biomes of Savanna, Atlantic Forest and Semi-Arid Woodland.

    Science.gov (United States)

    Scolforo, Henrique Ferraco; Scolforo, Jose Roberto Soares; Mello, Carlos Rogerio; Mello, Jose Marcio; Ferraz Filho, Antonio Carlos

    2015-01-01

    The objective of this study was to map the spatial distribution of aboveground carbon stock (using Regression-kriging) of arboreal plants in the Atlantic Forest, Semi-arid woodland, and Savanna Biomes in Minas Gerais State, southeastern Brazil. The database used in this study was obtained from 163 forest fragments, totaling 4,146 plots of 1,000 m2 distributed in these Biomes. A geographical model for carbon stock estimation was parameterized as a function of Biome, latitude and altitude. This model was applied over the samples and the residuals generated were mapped based on geostatistical procedures, selecting the exponential semivariogram theoretical model for conducting ordinary Kriging. The aboveground carbon stock was found to have a greater concentration in the north of the State, where the largest contingent of native vegetation is located, mainly the Savanna Biome, with Wooded Savanna and Shrub Savanna phytophysiognomes. The largest weighted averages of carbon stock per hectare were found in the south-center region (48.6 Mg/ha) and in the southern part of the eastern region (48.4 Mg/ha) of Minas Gerais State, due to the greatest predominance of Atlantic Forest Biome forest fragments. The smallest weighted averages per hectare were found in the central (21.2 Mg/ha), northern (20.4 Mg/ha), and northwestern (20.7 Mg/ha) regions of Minas Gerais State, where Savanna Biome fragments are predominant, in the phytophysiognomes Wooded Savanna and Shrub Savanna.

  8. Productivity

    DEFF Research Database (Denmark)

    Spring, Martin; Johnes, Geraint; Hald, Kim Sundtoft

    Productivity is increasingly critical for developed economies. It has always been important: as Paul Krugman puts it, “Productivity isn’t everything, but in the long run it is almost everything. A country’s ability to improve its standard of living over time depends almost entirely on its ability...... to raise its output per worker”(Krugman, 1994). Analyses of productivity have, by and large, been the preserve of economists. Operations Management (OM) is rooted in a similar concern for the efficient use of scarce resources; Management Accounting (MA) is concerned with the institutionalised measurement...... and management of productivity. Yet the three perspectives are rarely connected. This paper is a sketch of a literature review seeking to identify, contrast and reconcile these three perspectives. In so doing, it aims to strengthen the connections between policy and managerial analyses of productivity....

  9. Quantitative biome reconstruction using modern and late Quaternary pollen data from the southern part of the Russian Far East

    Science.gov (United States)

    Mokhova, Lyudmila; Tarasov, Pavel; Bazarova, Valentina; Klimin, Mikhail

    2009-12-01

    In this study we present a recent compilation of 286 modern surface pollen spectra from the southern part of the Russian Far East (42-54°N, 131-141°E) and use it to test the biome reconstruction method. Seventy terrestrial pollen taxa were assigned to plant functional types and then classified to eight regional biomes. When applied to 286 surface pollen spectra, the method assigns about 70% (201 sites) of the samples to the cool mixed forest biome, 17% - to the taiga, 2% - to the cool conifer forest, 3% - to the temperate deciduous forest, and 7% - to the steppe. The steppe reconstruction is characteristic of the pollen spectra from the agricultural areas around Lake Khanka. A visual comparison shows good agreement between pollen-derived biomes and actual vegetation distribution in the region. However, pollen and botanical data, compared with the potential vegetation distribution simulated from the modern climate dataset using the BIOME1 model, demonstrate that spatial distribution of cool mixed forest is underrepresented in the model simulation. The model sets the mean temperature of the coldest month of -15 °C as the factor limiting distribution of the temperate deciduous broadleaf taxa, while vegetation and pollen data from the region demonstrate that this limit should be lowered to -26 °C. Application of the method to the Gur 3-99 pollen record (50°00 'N, 137°03 'E) demonstrates that tundra vegetation predominated around the site prior to 14 ka BP (1 ka = 1000 cal. years). However, the local presence of boreal trees and mixed forest-tundra vegetation is suggested by relatively high taiga scores. Soon after 14 ka BP the scores of taiga become slightly higher than tundra scores. During 11.4-10.5 ka BP a cool conifer forest is reconstructed. Establishment of the full interglacial conditions is marked by the onset of cool mixed forest by 10.5 ka BP. Between 10.3 and 2.5 ka BP the scores of temperate deciduous forest are close to those of cool mixed forest and

  10. Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years ago

    Science.gov (United States)

    Marchant, R.; Cleef, A.; Harrison, S. P.; Hooghiemstra, H.; Markgraf, V.; van Boxel, J.; Ager, T.; Almeida, L.; Anderson, R.; Baied, C.; Behling, H.; Berrio, J. C.; Burbridge, R.; Björck, S.; Byrne, R.; Bush, M.; Duivenvoorden, J.; Flenley, J.; de Oliveira, P.; van Geel, B.; Graf, K.; Gosling, W. D.; Harbele, S.; van der Hammen, T.; Hansen, B.; Horn, S.; Kuhry, P.; Ledru, M.-P.; Mayle, F.; Leyden, B.; Lozano-García, S.; Melief, A. M.; Moreno, P.; Moar, N. T.; Prieto, A.; van Reenen, G.; Salgado-Labouriau, M.; Schäbitz, F.; Schreve-Brinkman, E. J.; Wille, M.

    2009-12-01

    The biomisation method is used to reconstruct Latin American vegetation at 6000±500 and 18 000±1000 radiocarbon years before present (14C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000±500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000±500 14C yr BP reconstruction are comparatively small; change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America show a change in biome assignment, but to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucatán peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000±1000 14C yr BP 61 samples from 34 sites record vegetation reflecting a generally cool and dry environment. Cool grass/shrubland is prevalent in southeast Brazil whereas Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate rain

  11. Identification of novel mammalian hosts and Brazilian biome geographic distribution of Trypanosoma cruzi TcIII and TcIV.

    Science.gov (United States)

    Barros, Juliana Helena S; Xavier, Samanta Cristina C; Bilac, Daniele; Lima, Valdirene Santos; Dario, Maria Augusta; Jansen, Ana Maria

    2017-08-01

    Trypanosoma cruzi is a parasitic protozoan responsible for Chagas disease. Seven different Discrete Typing Units (DTUs) of T. cruzi are currently identified in nature: TcI-TcVI, and TcBat whose distribution patterns in nature, hosts/reservoirs and eco-epidemiological importance are still little known. Here, we present novel data on the geographic distribution and diversity of mammalian hosts and vectors of T. cruzi DTUs TcIII and TcIV. In this study, we analyzed 61 T. cruzi isolates obtained from 18 species of mammals (five orders) and two Hemiptera genera. Samples were collected from five Brazilian biomes (Pantanal, Caatinga, Cerrado, Atlantic Rainforest, and Amazon) previously characterized as Z3 or mixed infection (TcI-Z3) by mini-exon gene PCR. To identify TcIII and TcIV genotypes, we applied restriction fragment length polymorphism analysis to the PCR-amplified histone 3 gene. DTUs TcIII and TcIV were identified in single and mixed infections from wide dispersion throughout five Brazilian biomes studied, with TcIV being the most common. Pantanal was the biome that displayed the largest number of samples characterized as TcIII and TcIV in single and mixed infections, followed by Atlantic Rainforest and Amazon. Species from the Didelphimorphia order displayed the highest frequency of infection and were found in all five biomes. We report, for the first time, the infection of a species of the Artiodactyla order by DTU TcIII. In addition, we describe new host species: five mammals (marsupials and rodents) and two genera of Hemiptera. Our data indicate that DTUs TcIII and TcIV are more widespread and infect a larger number of mammalian species than previously thought. In addition, they are transmitted in restricted foci and cycles, but in different microhabitats and areas with distinct ecological profiles. Finally, we show that DTUs TcIII and TcIV do not present any specific association with biomes or host species. Copyright © 2017. Published by Elsevier B.V.

  12. Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years ago

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    R. Marchant

    2009-12-01

    Full Text Available The biomisation method is used to reconstruct Latin American vegetation at 6000±500 and 18 000±1000 radiocarbon years before present (14C yr BP from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation.

    At 6000±500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000±500 14C yr BP reconstruction are comparatively small; change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America show a change in biome assignment, but to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucatán peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded.

    At 18 000±1000 14C yr BP 61 samples from 34 sites record vegetation reflecting a generally cool and dry environment. Cool grass/shrubland is prevalent in southeast Brazil whereas Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America

  13. Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years ago

    Science.gov (United States)

    Marchant, R.; Cleef, A.; Harrison, S.P.; Hooghiemstra, H.; Markgraf, Vera; Van Boxel, J.; Ager, T.; Almeida, L.; Anderson, R.; Baied, C.; Behling, H.; Berrio, J.C.; Burbridge, R.; Bjorck, S.; Byrne, R.; Bush, M.; Duivenvoorden, J.; Flenley, J.; De Oliveira, P.; Van Gee, B.; Graf, K.; Gosling, W.D.; Harbele, S.; Van Der Hammen, T.; Hansen, B.; Horn, S.; Kuhry, P.; Ledru, M.-P.; Mayle, F.; Leyden, B.; Lozano-Garcia, S.; Melief, A.M.; Moreno, P.; Moar, N.T.; Prieto, A.; Van Reenen, G.; Salgado-Labouriau, M.; Schabitz, F.; Schreve-Brinkman, E. J.; Wille, M.

    2009-01-01

    The biomisation method is used to reconstruct Latin American vegetation at 6000??500 and 18 000??1000 radiocarbon years before present ( 14C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000??500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000??500 14C yr BP reconstruction are comparatively small; change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America show a change in biome assignment, but to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucat??n peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000??1000 14C yr BP 61 samples from 34 sites record vegetation reflecting a generally cool and dry environment. Cool grass/shrubland is prevalent in southeast Brazil whereas Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate rain

  14. Land cover trajectory in the Caatinga biome: analysing trends, drivers and consequences with high resolution satellite time series in Paraiba, Brazil

    Science.gov (United States)

    Rufino, Iana; Cunha, John; Carlos, Galvão; Nailson, Silva

    2017-04-01

    The Caatinga Biome is a unique Earth ecosystem with only 1% of conserved and protected areas (Oliveira et al, 2012). Human activities pressures high threaten Caatinga Biodiversity. Along the last decades, native green areas are changed by crops, livestock or those areas are reached by urban areas (Oliveira et al 2012; Fiaschi e Pianni, 2009; Sivakumar, 2007; Castelleti et al, 2004; Pereira et al, 2013; le Polain de Waroux & Lambin, 2012; Apgaua et al, 2013). Precipitation rates have high variability in space and time. High temperatures with small inter annual variability drives evapotranspiration up and turns the water scarcity the main challenge for sustainable life in rural areas. Sánchez-Azofeifa et al., (2005) try establishing research priorities for tropical dry forests and they recommend Scientific Community to focus on ecology and social aspects and possibilities of remote sensing techniques in those studies. Specific algorithms to produce estimates of energy balance and evapotranspiration of water to the atmosphere can process satellite images derived from several sensors. These estimates, combined with the analysis of historical time-series, allow the detection of changes in the terrestrial plant systems and can be used to discriminate the influences from human occupation and those from climate variability and/or change on energy fluxes and land cover. The algorithms have to be calibrated and validated using ground-based data. Thus, a large multiple source set of satellite and ground data has to be processed and comparatively analyzed. However, the high computational cost for image processing introduce further processing challenges. In order to face those challenges, this research explores the possibilities of using these medium resolution remote sensing products (30 meters), presenting a multitemporal long term analysis (24 months) to identify the land trajectory of one Semi-arid area (pilot) in the Caatinga biome. All processing steps use the

  15. Accounting for age Structure in Ponderosa Pine Ecosystem Analyses: Integrating Management, Disturbance Histories and Observations with the BIOME-BGC Model

    Science.gov (United States)

    Hibbard, K. A.; Law, B.; Thornton, P.

    2003-12-01

    Disturbance and management regimes in forested ecosystems have been recently highlighted as important factors contributing to quantification of carbon stocks and fluxes. Disturbance events, such as stand-replacing fires and current management regimes that emphasize understory and tree thinning are primary suspects influencing ecosystem processes, including net ecosystem productivity (NEP) in forests of the Pacific Northwest. Several recent analyses have compared simulated to measured component stocks and fluxes of carbon in Ponderosa Pine (Pinus ponderosa var. Laws) at 12 sites ranging from 9 to 300 years in central Oregon (Law et al. 2001, Law et al. 2003) using the BIOME-BGC model. Major emphases on ecosystem model developments include improving allocation logic, integrating ecosystem processes with disturbance such as fire and including nitrogen in biogeochemical cycling. In Law et al. (2001, 2003), field observations prompted BIOME-BGC improvements including dynamic allocation of carbon to fine root mass through the life of a stand. A sequence of simulations was also designed to represent both management and disturbance histories for each site, however, current age structure of each sites wasn't addressed. Age structure, or cohort management has largely been ignored by ecosystem models, however, some studies have sought to incorporate stand age with disturbance and management (e.g. Hibbard et al. 2003). In this analyses, we regressed tree ages against height (R2 = 0.67) to develop a proportional distribution of age structure for each site. To preserve the integrity of the comparison between Law et al. (2003) and this study, we maintained the same timing of harvest, however, based on the distribution of age structures, we manipulated the amount of removal. Harvest by Law et al. (2003) was set at stand-replacement (99%) levels to simulate clear-cutting and reflecting the average top 10% of the age in each plot. For the young sites, we set removal at 73%, 51% and

  16. Synergistic impacts of deforestation, climate change and fire on the future biomes distribution in Amazonia

    Science.gov (United States)

    Sampaio, G.; Cardoso, M. F.; Nobre, C. A.; Salazar, L. F.

    2013-05-01

    Several studies indicate future increase of environmental risks for the ecosystems in the Amazon region as a result of climate and land-use change, and their synergistic interactions. Modeling studies (e.g. Oyama and Nobre 2004, Salazar et al. 2007, Malhi et al. 2008) project rapid and irreversible replacement of forests by savannas with large-scale losses of biodiversity and livelihoods for people in the region. This process is referred to as the Amazon Dieback, where accelerated plant mortality due to environmental changes lead to forest collapse and savannas expansion after "tipping points" in climate and land surface changes are achieved. In this study we performed new analyses to quantify how deforestation, climate change and fire may combine to affect the distribution of major biomes in Amazonia. Changes in land use consider deforestation scenarios of 0%, 20%, 40%, and 50% (Sampaio et al., 2007), with and without fires (Cardoso et al., 2008), under the two greenhouse gases scenarios B1 and A2 and three "representative concentration pathways" (RCPs): 2.6, 4.5 and 8.5, for years 2015-2034 and 2040-2059 ("2025" and "2050" time-slices), from IPCC AR4 and CMIP5. The results show that the area affected in scenarios A2 and RCP 8.5 is larger than in the climate scenario B1 and RCP 2.6, and in both cases the effect is progressively higher in time. Most important changes occur in the East and South of the Amazon, with replacement of tropical forest by seasonal forest and savanna. The effect of fire in this region is important in all scenarios. The Northwest Amazon presents the smallest changes in the area of tropical forest, indicating that even for substantial land-use modifications and global climate change, the resulting atmospheric conditions would still support tropical forest in the region. In summary, we conclude that the synergistic combination of deforestation, climate change resulting from global warming, and the potential for higher fire occurrence may lead

  17. Drivers of leaf carbon exchange capacity across biomes at the continental scale.

    Science.gov (United States)

    Smith, Nicholas G; Dukes, Jeffrey S

    2018-04-29

    Realistic representations of plant carbon exchange processes are necessary to reliably simulate biosphere-atmosphere feedbacks. These processes are known to vary over time and space, though the drivers of the underlying rates are still widely debated in the literature. Here, we measured leaf carbon exchange in >500 individuals of 98 species from the neotropics to high boreal biomes to determine the drivers of photosynthetic and dark respiration capacity. Covariate abiotic (long- and short-term climate) and biotic (plant type, plant size, ontogeny, water status) data were used to explore significant drivers of temperature-standardized leaf carbon exchange rates. Using model selection, we found the previous week's temperature and soil moisture at the time of measurement to be a better predictor of photosynthetic capacity than long-term climate, with the combination of high recent temperatures and low soil moisture tending to decrease photosynthetic capacity. Non-trees (annual and perennials) tended to have greater photosynthetic capacity than trees, and, within trees, adults tended to have greater photosynthetic capacity than juveniles, possibly as a result of differences in light availability. Dark respiration capacity was less responsive to the assessed drivers than photosynthetic capacity, with rates best predicted by multi-year average site temperature alone. Our results suggest that, across large spatial scales, photosynthetic capacity quickly adjusts to changing environmental conditions, namely light, temperature, and soil moisture. Respiratory capacity is more conservative and most responsive to longer-term conditions. Our results provide a framework for incorporating these processes into large-scale models and a dataset to benchmark such models. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

  18. 2008 Co2 Assimilation in Plants: Genome to Biome Gordon Research Conference - August 17-22

    Energy Technology Data Exchange (ETDEWEB)

    James V. Maroney

    2009-08-12

    Formerly entitled 'CO2 Fixation and Metabolism in Green Plants', this long-standing Gordon Research Conference has been held on a triennial basis since 1976. In 1990 the participants decided to alternate between sites in the U.S. and outside the U.S. The 2005 conference was held in Europe at the Centre Paul Langevin in Aussois, France, so the 2008 conference returns to a U.S. site - the University of New England in Biddeford, Maine. The 2008 conference covers basic plant research related to photosynthesis and the subsequent regulation and engineering of carbon assimilation. Approaches that range from post-genomic technologies and systems biology, through to fundamental biochemistry, physiology and molecular biology are integrated within ecological and agronomic contexts. As such, the meeting provides the rare opportunity of a single venue for discussing all aspects of the 'carbon-side' of photosynthesis - from genome to biome. The 2008 conference will include an emphasis on the central role of carbon assimilation by plants for developing new sources of bioenergy and for achieving a carbon-neutral planet. A special characteristic of this conference is its 'intimacy' with approximately 110 conferees, ranging from beginning graduate students and postdoctoral associates to leading senior plant scientists, engaged in open and forward-thinking discussions in an informal, friendly setting. With extended time devoted to discussion, and the encouragement to challenge dogma, it is unlike other meetings in the U.S. or abroad. Another novel feature of the conference is a session devoted to the latest 'hot off the press' findings by both established and early career scientists, picked from the abstracts. Together with an expanded poster discussion in the evening sessions, this session provides an opportunity for early career scientists to present interesting new data and to 'test drive' hypotheses in a collegial atmosphere.

  19. Genetic diversity of Burkholderia (Proteobacteria) species from the Caatinga and Atlantic rainforest biomes in Bahia, Brazil.

    Science.gov (United States)

    Santini, A C; Santos, H R M; Gross, E; Corrêa, R X

    2013-03-11

    The genus Burkholderia (β-Proteobacteria) currently comprises more than 60 species, including parasites, symbionts and free-living organisms. Several new species of Burkholderia have recently been described showing a great diversity of phenotypes. We examined the diversity of Burkholderia spp in environmental samples collected from Caatinga and Atlantic rainforest biomes of Bahia, Brazil. Legume nodules were collected from five locations, and 16S rDNA and recA genes of the isolated microorganisms were analyzed. Thirty-three contigs of 16S rRNA genes and four contigs of the recA gene related to the genus Burkholderia were obtained. The genetic dissimilarity of the strains ranged from 0 to 2.5% based on 16S rDNA analysis, indicating two main branches: one distinct branch of the dendrogram for the B. cepacia complex and another branch that rendered three major groups, partially reflecting host plants and locations. A dendrogram designed with sequences of this research and those designed with sequences of Burkholderia-type strains and the first hit BLAST had similar topologies. A dendrogram similar to that constructed by analysis of 16S rDNA was obtained using sequences of the fragment of the recA gene. The 16S rDNA sequences enabled sufficient identification of relevant similarities and groupings amongst isolates and the sequences that we obtained. Only 6 of the 33 isolates analyzed via 16S rDNA sequencing showed high similarity with the B. cepacia complex. Thus, over 3/4 of the isolates have potential for biotechnological applications.

  20. FLUXAPYROXAD IN THE ASIAN SOYBEAN RUST CONTROL IN THE CERRADO BIOME

    Directory of Open Access Journals (Sweden)

    RAFAEL MENEZES SILVA DE FREITAS

    2016-01-01

    Full Text Available The etiologic agent of the Asian soybean rust is the Phakopsora pachyrhizi, which causes a reduction in the photosynthetic leaf area and, consequently, in the crop yield. Chemical control is one of the main measures for its management. The objective of this work was to evaluate the efficacy and selectivity of the fluxapyroxad fungicide on controlling the Asian soybean rust, under the edaphoclimatic conditions of the Cerrado biome. The experiment was conducted in an area under no-tillage system, in the Agricultural Research Center, Rio Verde, Goias, Brazil, during the 2012/2013 crop season, using the cultivar NA7337. A randomized block experimental design was used, with twelve treatments and four replications. The treatments consisted of applications of fluxapyroxad (FX, pyraclostrobin (PT, epoxiconazole (EX and metconazole (MZ. The average severity of the disease in the plants reached 37% in the Control. All treatments with fungicides differed from the Control. Treatments 9, 10, 11 and 12 provided the greatest rates of soybean rust control. The treatments 10, 11 and 12 had the highest thousand grain weights, and the yields of the treatments 2, 3 and 11, despite higher than the Control, were lower than the treatments 4, 5, 6, 7, 8, 9, 10 and 12, which had statistically equal yields. The increasing in yield, compared to the Control, ranged from 10.05% (pyraclostrobin, epoxiconazole + pyraclostrobin + mineral oil to 30.55% (pyraclostrobin, pyraclostrobin + fluxapyroxad + mineral oil and pyraclostrobin + metconazole + mineral oil. The highest rates of soybean rust control were presented by fungicides containing fluxapyroxad.

  1. Requisitos uniformes para preparar los manuscritos enviados a revistas biomédicas

    Directory of Open Access Journals (Sweden)

    1998-01-01

    Full Text Available En 1978, un reducido grupo de directores de revistas médicas generales que se publican en inglés se reunió de manera informal en Vancouver (Canadá a fin de fijar normas con respecto al formato que deberían adoptar los manuscritos enviados a esas publicaciones. Este fue el inicio de lo que con el tiempo llegó a conocerse como el Grupo de Vancouver. Sus requisitos para la preparación de manuscritos, que incluían el formato de las referencias bibliográficas creado por la Biblioteca Nacional de Medicina de los Estados Unidos, se publicaron por vez primera en 1979. Con el paso del tiempo el Grupo de Vancouver creció y se convirtió en el Comité Internacional de Directores de Revistas Médicas (CIDRM, que se reúne una vez al año y que gradualmente ha venido ampliando los temas que le conciernen. El Comité ha producido cinco ediciones de los requisitos uniformes para preparar los manuscritos enviados a revistas biomédicas. A lo largo de los años han surgido asuntos que van más allá de la preparación del manuscrito. Algunos de esos asuntos se han incorporado a los requisitos uniformes, mientras que otros se tratan en declaraciones por separado. Cada declaración se ha publicado en una revista científica.

  2. Mosquito community composition in dynamic landscapes from the Atlantic Forest biome (Diptera, Culicidae

    Directory of Open Access Journals (Sweden)

    Mário Luís Pessôa Guedes

    2014-03-01

    Full Text Available Mosquito community composition in dynamic landscapes from the Atlantic Forest biome (Diptera, Culicidae. Considering that some species of Culicidae are vectors of pathogens, both the knowledge of the diversity of the mosquito fauna and how some environment factors influence in it, are important subjects. In order to address the composition of Culicidae species in a forest reserve in southern Atlantic Forest, we compared biotic and abiotic environmental determinants and how they were associated with the occurrence of species between sunset and sunrise. The level of conservation of the area was also considered. The investigation was carried out at Reserva Natural do Morro da Mina, in Antonina, state of Paraná, Brazil. We performed sixteen mosquito collections employing Shannon traps at three-hour intervals, from July 2008 to June 2009. The characterization of the area was determined using ecological indices of diversity, evenness, dominance and similarity. We compared the frequency of specimens with abiotic variables, i.e., temperature, relative humidity and pluviosity. Seven thousand four hundred ten mosquito females were captured. They belong to 48 species of 12 genera. The most abundant genera were Anopheles, Culex, Coquillettidia, Aedes and Runchomyia. Among the species, the most abundant was Anopheles cruzii, the primary vector of Plasmodium spp. in the Atlantic Forest. Results of the analyses showed that the abiotic variables we tested did not influence the occurrence of species, although certain values suggested that there was an optimum range for the occurrence of culicid species. It was possible to detect the presence of species of Culicidae with different epidemiologic profiles and habitat preference.

  3. Abiotic and biotic determinants of leaf carbon exchange capacity from tropical to high boreal biomes

    Science.gov (United States)

    Smith, N. G.; Dukes, J. S.

    2016-12-01

    Photosynthesis and respiration on land represent the two largest fluxes of carbon dioxide between the atmosphere and the Earth's surface. As such, the Earth System Models that are used to project climate change are high sensitive to these processes. Studies have found that much of this uncertainty is due to the formulation and parameterization of plant photosynthetic and respiratory capacity. Here, we quantified the abiotic and biotic factors that determine photosynthetic and respiratory capacity at large spatial scales. Specifically, we measured the maximum rate of Rubisco carboxylation (Vcmax), the maximum rate of Ribulose-1,5-bisphosphate regeneration (Jmax), and leaf dark respiration (Rd) in >600 individuals of 98 plant species from the tropical to high boreal biomes of Northern and Central America. We also measured a bevy of covariates including plant functional type, leaf nitrogen content, short- and long-term climate, leaf water potential, plant size, and leaf mass per area. We found that plant functional type and leaf nitrogen content were the primary determinants of Vcmax, Jmax, and Rd. Mean annual temperature and mean annual precipitation were not significant predictors of these rates. However, short-term climatic variables, specifically soil moisture and air temperature over the previous 25 days, were significant predictors and indicated that heat and soil moisture deficits combine to reduce photosynthetic capacity and increase respiratory capacity. Finally, these data were used as a model benchmarking tool for the Community Land Model version 4.5 (CLM 4.5). The benchmarking analyses determined errors in the leaf nitrogen allocation scheme of CLM 4.5. Under high leaf nitrogen levels within a plant type the model overestimated Vcmax and Jmax. This result suggested that plants were altering their nitrogen allocation patterns when leaf nitrogen levels were high, an effect that was not being captured by the model. These data, taken with models in mind

  4. Implications of a lightning-rich tundra biome for permafrost carbon and vegetation dynamics

    Science.gov (United States)

    Chen, Y.; Veraverbeke, S.; Randerson, J. T.

    2017-12-01

    Lightning is a major ignition source of wildfires in circumpolar boreal forests but rarely occurs in arctic tundra. While theoretical and empirical work suggests that climate change will increase lightning strikes in temperate regions, much less is known about future changes in lightning across terrestrial ecosystems at high northern latitudes. Here we analyzed the spatial and temporal patterns of lightning flash rate (FR) from the satellite observations and surface detection networks. Regression models between the observed FR from the Optical Transient Detector on the MicroLab-1 satellite (later renamed OV-1) and meteorological parameters, including surface temperature (T), convective available potential energy (CAPE), and convective precipitation (CP) from ECMWF (European Centre for Medium-Range Weather Forecasts) ERA-interim reanalysis, were established and assessed. We found that FR had significant linear correlations with CAPE and CP, and a strong non-linear relationship with T. The statistical model based on T and CP can reproduce most of the spatial and temporal variability in FR in the circumpolar region. By using the regression model and meteorological predictions from 24 earth system models in the Coupled Model Intercomparison Project Phase 5 (CMIP5), we estimated the spatial distribution of FR by the end of the 21st century. Due to increases in surface temperature and convection, modeled FR shows substantial increase in northern biomes, including a 338% change in arctic tundra and a 185% change in regions with permafrost soil carbon reservoirs. These changes highlight a new mechanism by which permafrost carbon is vulnerable to the sustained impacts of climate warming. Increased fire in a warmer and lightning-rich future near the treeline has the potential to accelerate the northward migration of trees, which may further enhance warming and the abundance of lightning strikes.

  5. Social wasps (Polistinae from Pampa Biome: South Brazil, Northeastern Argentina and Uruguay

    Directory of Open Access Journals (Sweden)

    Alexandre Somavilla

    2017-08-01

    Full Text Available Abstract. This study aimed to determine social wasps’ species from Pampa Biome. Were examined samples of social wasps from south-central of Rio Grande do Sul state (Brazil, parts of Buenos Aires, Entre Rios, Corrientes, Cordoba, Santa Fé and La Pampa provinces (Argentina and in Uruguay maintained in the Coleção Entomológica de Santa Cruz do Sul (Santa Cruz do Sul-Brazil, American Museum of Natural History (USA, Natural History Museum (London-United Kingdom and Muséum National d’Histoire Naturelle (Paris-France. Thirty species were recorded: Agelaia (01, Brachygastra (01, Mischocyttarus (04, Polistes (15, Polybia (08 and Protonectarina (01. Vespas sociais do Bioma Pampa: sul do Brasil, nordeste da Argentina e Uruguai. Resumo. Este estudo objetivou determinar as espécies de vespas sociais provenientes do Bioma Pampa. Foram examinadas vespas sociais provenientes de coletas da região centro-sul do Rio Grande do Sul (Brasil, parte das províncias de Buenos Aires, Entre Rios, Corrientes, Cordoba, Santa Fé e La Pampa (Argentina e Uruguai depositadas na Coleção Entomológica de Santa Cruz do Sul (Santa Cruz do Sul-Brasil, American Museum of Natural History (Nova Iorque-USA, Natural History Museum (Londres-Reino Unido e Muséum National d’Histoire Naturelle (Paris-França. Trinta espécies foram registradas: Agelaia (01, Brachygastra (01, Mischocyttarus (04, Polistes (15, Polybia (08 e Protonectarina (01.

  6. Use of Orbital LIDAR in the Brazilian Cerrado Biome: Potential Applications and Data Availability

    Directory of Open Access Journals (Sweden)

    Laerte Guimarães Ferreira

    2011-10-01

    Full Text Available This paper focuses on the Ice, Cloud and land Elevation Satellite (ICESat Geoscience Laser Altimeter System (GLAS data availability over the 2 million km2 Cerrado, the Brazilian central savanna biome and one of the world’s biodiversity hotspots. Overall, about 2.5 million laser shots, distributed along the seven years of ICESat operation (2003–2009 and comprising three major seasonal domains, were acquired, from which, 206,026 and 176,035 screened footprints are coincident with the remnant vegetation and cultivated pasture areas (the dominant land-use form in the Cerrado. Although these points are well distributed over the entire Cerrado, the ICESat track data collection results in substantial data gaps. In relation to the 15,612 Cerrado watersheds (6th order Otto basin system, 8,369 and 4,415 watersheds are completely deprived of data points over their remnant vegetation and pasture covers, respectively. Light Detection and Ranging (LIDAR availability was also evaluated in relation to specific targets of interest, including both fully-protected conservation units as well as areas impacted by fire and deforestation. In spite of the very few occurrences, our assessments indicate that enough LIDAR data is available for retrieving structural and functional properties of a variety of Cerrado physiognomies, as well as to assess how these physiognomies respond to anthropogenic induced changes. In fact, the comprehensive data availability analysis conducted in this study corroborate the potential of GLAS LIDAR waveforms for the retrieval of biophysical properties at both local and regional scales, particularly concerning remnant carbon stocks and pasture conditions, key information for the conservation of the fast-changing and severely threatened Cerrado.

  7. Survival and growth of under-planted trees: a meta-analysis across four biomes.

    Science.gov (United States)

    Paquette, Alain; Bouchard, André; Cogliastro, Alain

    2006-08-01

    The transformation of natural forest regeneration processes by human activities has created the need to develop and implement new models of forest management. Alternative silvicultural systems such as variable retention harvest, partial and patch cuts, and older forest management practices such as under-planting, are used in many forests around the world, particularly in North American oak stands, the boreal and coastal temperate rain forests of Canada and the United States, and in many degraded tropical regions of Asia and the Americas. Specific objectives are pursued in each of these biomes, but some are common to most regions, such as preservation of cover and structure and their associated benefits for natural or artificial regeneration due to moderation of the microclimate, development of optimal light and competition conditions, and reduced predation by herbivores. Shelterwoods are often presented as an alternative to clear-cutting to improve the survival of planted trees. A meta-analysis of published results with randomization tests was performed to test the relationship between overstory density and planted seedling growth and survival. Multiple comparisons were also used to reveal optimal levels of overstory density, if they exist. A majority of studies show that survival and growth improve as stand density decreases to an intermediate level, below which they either drop or stabilize. This level seems optimal in most conditions, as it is also more apt to fulfill other objectives imposed on today's forest activities, such as the conservation of forest processes and structures, and the reconstruction of degraded stands through the accelerated return of mid- to late-successional species.

  8. Gene expression analysis reveals important pathways for drought response in leaves and roots of a wheat cultivar adapted to rainfed cropping in the Cerrado biome.

    Science.gov (United States)

    Poersch-Bortolon, Liane Balvedi; Pereira, Jorge Fernando; Nhani, Antonio; Gonzáles, Hebert Hernán Soto; Torres, Gisele Abigail Montan; Consoli, Luciano; Arenhart, Rafael Augusto; Bodanese-Zanettini, Maria Helena; Margis-Pinheiro, Márcia

    2016-01-01

    Drought limits wheat production in the Brazilian Cerrado biome. In order to search for candidate genes associated to the response to water deficit, we analyzed the gene expression profiles, under severe drought stress, in roots and leaves of the cultivar MGS1 Aliança, a well-adapted cultivar to the Cerrado. A set of 4,422 candidate genes was found in roots and leaves. The number of down-regulated transcripts in roots was higher than the up-regulated transcripts, while the opposite occurred in leaves. The number of common transcripts between the two tissues was 1,249, while 2,124 were specific to roots and 1,049 specific to leaves. Quantitative RT-PCR analysis revealed a 0.78 correlation with the expression data. The candidate genes were distributed across all chromosomes and component genomes, but a greater number was mapped on the B genome, particularly on chromosomes 3B, 5B and 2B. When considering both tissues, 116 different pathways were induced. One common pathway, among the top three activated pathways in both tissues, was starch and sucrose metabolism. These results pave the way for future marker development and selection of important genes and are useful for understanding the metabolic pathways involved in wheat drought response.

  9. production

    African Journals Online (AJOL)

    answered satisfactorily. An additional important factor in discouraging collaborative work in animal and grassland production is, without doubt, the complexity of work in this field compared with much of that in the individual discipline and, in particular, the com- plexity of work on forage as a source of nutrients for live- stock.

  10. Different responses of soil respiration and its components to nitrogen addition among biomes: a meta-analysis.

    Science.gov (United States)

    Zhou, Lingyan; Zhou, Xuhui; Zhang, Baocheng; Lu, Meng; Luo, Yiqi; Liu, Lingli; Li, Bo

    2014-07-01

    Anthropogenic activities have increased nitrogen (N) deposition by threefold to fivefold over the last century, which may considerably affect soil respiration (Rs). Although numerous individual studies and a few meta-analyses have been conducted, it remains controversial as to how N addition affects Rs and its components [i.e., autotrophic (Ra) and heterotrophic respiration (Rh)]. To reconcile the difference, we conducted a comprehensive meta-analysis of 295 published studies to examine the responses of Rs and its components to N addition in terrestrial ecosystems. We also assessed variations in their responses in relation to ecosystem types, environmental conditions, and experimental duration (DUR). Our results show that N addition significantly increased Rs by 2.0% across all biomes but decreased by 1.44% in forests and increased by 7.84% and 12.4% in grasslands and croplands, respectively (P biomes with more stimulation of Ra in croplands and grasslands compared with no significant change in forests. Rh exhibited a similar negative response to N addition among biomes except that in croplands, tropical and boreal forests. Methods of partitioning Rs did not induce significant differences in the responses of Ra or Rh to N addition, except that Ra from root exclusion and component integration methods exhibited the opposite responses in temperate forests. The response ratios (RR) of Rs to N addition were positively correlated with mean annual temperature (MAT), with being more significant when MAT was less than 15 °C, but negatively with DUR. In addition, the responses of Rs and its components to N addition largely resulted from the changes in root and microbial biomass and soil C content as indicated by correlation analysis. The response patterns of Rs to N addition as revealed in this study can be benchmarks for future modeling and experimental studies. © 2013 John Wiley & Sons Ltd.

  11. Gully erosion in the Caatinga biome, Brazil: measurement and stochastic modelling

    Science.gov (United States)

    Lima Alencar, Pedro Henrique; de Araújo, José Carlos; Nonato Távora Costa, Raimundo

    2017-04-01

    In contrast with inter-rill erosion, which takes a long time to modify the terrain form, gully erosion can fast and severely change the landscape. In the Brazilian semiarid region, a one-million km2 area that coincides with the Caatinga biome, inter-rill erosion prevails due to the silty shallow soils. However, gully erosion does occur in the Caatinga, with temporal increasing severity. This source of sediment impacts the existing dense network of small dams, generating significant deleterious effects, such as water availability reduction in a drought-prone region. This study focuses on the Madalena basin (124 km2, state of Ceará, Brazil), a land-reform settlement with 20 inhabitants per km2, whose main economic activities are agriculture (especially Zea mays), livestock and fishing. In the catchment area, where there are 12 dams (with storage capacity ranging from 6.104 to 2.107 m3), gully erosion has become an issue due to its increasing occurrence. Eight gully-erosion sites have been identified in the basin, but most of them have not yet reached great dimensions (depth and/or width), nor interacted with groundwater, being therefore classified as ephemeral gullies. We selected the three most relevant sites and measured the topography of the eroded channels, as well as the neighboring terrain relief, using accurate total stations and unmanned aerial vehicle. The data was processed with the help of software, such as DataGeosis (Office 7.5) and Surfer (11.0), providing information on gully erosion in terms of (μ ± σ): projection area (317±165 m2), eroded mass (61±36 Mg) and volume (42±25 m3), length (38±6 m), maximum depth (0.58±0.13 m) and maximum width (6.00±2.35 m). The measured data are then compared with those provided by the Foster and Lane model (1986). The model generated results with considerable scatter. This is possibly due to uncertainties in the field parameters, which are neglected in the deterministic approach of most physically-based models

  12. Key Edaphic Properties Largely Explain Temporal and Geographic Variation in Soil Microbial Communities across Four Biomes

    Science.gov (United States)

    Borton, Hannah M.; Espinosa, Noelle; Gebhardt, Martha; Gil-Loaiza, Juliana; Gutknecht, Jessica L. M.; Maes, Patrick W.; Mott, Brendon M.; Parnell, John Jacob; Purdy, Gayle; Rodrigues, Pedro A. P.; Stanish, Lee F.; Walser, Olivia N.

    2015-01-01

    Soil microbial communities play a critical role in nutrient transformation and storage in all ecosystems. Quantifying the seasonal and long-term temporal extent of genetic and functional variation of soil microorganisms in response to biotic and abiotic changes within and across ecosystems will inform our understanding of the effect of climate change on these processes. We examined spatial and seasonal variation in microbial communities based on 16S rRNA gene sequencing and phospholipid fatty acid (PLFA) composition across four biomes: a tropical broadleaf forest (Hawaii), taiga (Alaska), semiarid grassland-shrubland (Utah), and a subtropical coniferous forest (Florida). In this study, we used a team-based instructional approach leveraging the iPlant Collaborative to examine publicly available National Ecological Observatory Network (NEON) 16S gene and PLFA measurements that quantify microbial diversity, composition, and growth. Both profiling techniques revealed that microbial communities grouped strongly by ecosystem and were predominately influenced by three edaphic factors: pH, soil water content, and cation exchange capacity. Temporal variability of microbial communities differed by profiling technique; 16S-based community measurements showed significant temporal variability only in the subtropical coniferous forest communities, specifically through changes within subgroups of Acidobacteria. Conversely, PLFA-based community measurements showed seasonal shifts in taiga and tropical broadleaf forest systems. These differences may be due to the premise that 16S-based measurements are predominantly influenced by large shifts in the abiotic soil environment, while PLFA-based analyses reflect the metabolically active fraction of the microbial community, which is more sensitive to local disturbances and biotic interactions. To address the technical issue of the response of soil microbial communities to sample storage temperature, we compared 16S-based community

  13. A cross-biome synthesis of soil respiration and its determinants under simulated precipitation changes.

    Science.gov (United States)

    Liu, Lingli; Wang, Xin; Lajeunesse, Marc J; Miao, Guofang; Piao, Shilong; Wan, Shiqiang; Wu, Yuxin; Wang, Zhenhua; Yang, Sen; Li, Ping; Deng, Meifeng

    2016-04-01

    Soil respiration (Rs) is the second-largest terrestrial carbon (C) flux. Although Rs has been extensively studied across a broad range of biomes, there is surprisingly little consensus on how the spatiotemporal patterns of Rs will be altered in a warming climate with changing precipitation regimes. Here, we present a global synthesis Rs data from studies that have manipulated precipitation in the field by collating studies from 113 increased precipitation treatments, 91 decreased precipitation treatments, and 14 prolonged drought treatments. Our meta-analysis indicated that when the increased precipitation treatments were normalized to 28% above the ambient level, the soil moisture, Rs, and the temperature sensitivity (Q10) values increased by an average of 17%, 16%, and 6%, respectively, and the soil temperature decreased by -1.3%. The greatest increases in Rs and Q10 were observed in arid areas, and the stimulation rates decreased with increases in climate humidity. When the decreased precipitation treatments were normalized to 28% below the ambient level, the soil moisture and Rs values decreased by an average of -14% and -17%, respectively, and the soil temperature and Q10 values were not altered. The reductions in soil moisture tended to be greater in more humid areas. Prolonged drought without alterations in the amount of precipitation reduced the soil moisture and Rs by -12% and -6%, respectively, but did not alter Q10. Overall, our synthesis suggests that soil moisture and Rs tend to be more sensitive to increased precipitation in more arid areas and more responsive to decreased precipitation in more humid areas. The responses of Rs and Q10 were predominantly driven by precipitation-induced changes in the soil moisture, whereas changes in the soil temperature had limited impacts. Finally, our synthesis of prolonged drought experiments also emphasizes the importance of the timing and frequency of precipitation events on ecosystem C cycles. Given these

  14. Holocene evolution of lakes in the forest-tundra biome of northern Manitoba, Canada

    Science.gov (United States)

    Hobbs, William O.; Edlund, Mark B.; Umbanhowar, Charles E.; Camill, Philip; Lynch, Jason A.; Geiss, Christoph; Stefanova, Vania

    2017-03-01

    The late-Quaternary paleoenvironmental history of the western Hudson Bay region of Subarctic Canada is poorly constrained. Here, we present a regional overview of the post-glacial history of eight lakes which span the forest-tundra biome in northern Manitoba. We show that during the penultimate drainage phase of Lake Agassiz the lake water had an estimated pH of ∼6.0, with abundant quillwort (Isöetes spp.) along the lakeshore and littoral zone and some floating green algae (Botryococcus spp. and Pediastrum sp.). Based on multiple sediment proxies, modern lake ontogeny in the region commenced at ∼7500 cal yrs BP. Pioneering diatom communities were shaped by the turbid, higher alkalinity lake waters which were influenced by base cation weathering of the surrounding till following Lake Agassiz drainage. By ∼7000 cal yrs BP, soil development and Picea spp. establish and the lakes began a slow trajectory of acidification over the remaining Holocene epoch. The natural acidification of the lakes in this region is slow, on the order of several millennia for one pH unit. Each of the study lakes exhibit relatively stable aquatic communities during the Holocene Thermal Maximum, suggesting this period is a poor analogue for modern climatic changes. During the Neoglacial, the beginning of the post-Little Ice Age period represents the most significant climatic event to impact the lakes of N. Manitoba. In the context of regional lake histories, the rate of diatom floristic change in the last 200-300 years is unprecedented, with the exception of post-glacial lake ontogeny in some of the lakes. For nearly the entire history of the lakes in this region, there is a strong linkage between landscape development and the aquatic ecosystems; however this relationship appears to become decoupled or less strong in the post-LIA period. Significant 20th century changes in the aquatic ecosystem cannot be explained wholly by changes in the terrestrial ecosystem, suggesting that future

  15. Key Edaphic Properties Largely Explain Temporal and Geographic Variation in Soil Microbial Communities across Four Biomes.

    Science.gov (United States)

    Docherty, Kathryn M; Borton, Hannah M; Espinosa, Noelle; Gebhardt, Martha; Gil-Loaiza, Juliana; Gutknecht, Jessica L M; Maes, Patrick W; Mott, Brendon M; Parnell, John Jacob; Purdy, Gayle; Rodrigues, Pedro A P; Stanish, Lee F; Walser, Olivia N; Gallery, Rachel E

    2015-01-01

    Soil microbial communities play a critical role in nutrient transformation and storage in all ecosystems. Quantifying the seasonal and long-term temporal extent of genetic and functional variation of soil microorganisms in response to biotic and abiotic changes within and across ecosystems will inform our understanding of the effect of climate change on these processes. We examined spatial and seasonal variation in microbial communities based on 16S rRNA gene sequencing and phospholipid fatty acid (PLFA) composition across four biomes: a tropical broadleaf forest (Hawaii), taiga (Alaska), semiarid grassland-shrubland (Utah), and a subtropical coniferous forest (Florida). In this study, we used a team-based instructional approach leveraging the iPlant Collaborative to examine publicly available National Ecological Observatory Network (NEON) 16S gene and PLFA measurements that quantify microbial diversity, composition, and growth. Both profiling techniques revealed that microbial communities grouped strongly by ecosystem and were predominately influenced by three edaphic factors: pH, soil water content, and cation exchange capacity. Temporal variability of microbial communities differed by profiling technique; 16S-based community measurements showed significant temporal variability only in the subtropical coniferous forest communities, specifically through changes within subgroups of Acidobacteria. Conversely, PLFA-based community measurements showed seasonal shifts in taiga and tropical broadleaf forest systems. These differences may be due to the premise that 16S-based measurements are predominantly influenced by large shifts in the abiotic soil environment, while PLFA-based analyses reflect the metabolically active fraction of the microbial community, which is more sensitive to local disturbances and biotic interactions. To address the technical issue of the response of soil microbial communities to sample storage temperature, we compared 16S-based community

  16. Key Edaphic Properties Largely Explain Temporal and Geographic Variation in Soil Microbial Communities across Four Biomes.

    Directory of Open Access Journals (Sweden)

    Kathryn M Docherty

    Full Text Available Soil microbial communities play a critical role in nutrient transformation and storage in all ecosystems. Quantifying the seasonal and long-term temporal extent of genetic and functional variation of soil microorganisms in response to biotic and abiotic changes within and across ecosystems will inform our understanding of the effect of climate change on these processes. We examined spatial and seasonal variation in microbial communities based on 16S rRNA gene sequencing and phospholipid fatty acid (PLFA composition across four biomes: a tropical broadleaf forest (Hawaii, taiga (Alaska, semiarid grassland-shrubland (Utah, and a subtropical coniferous forest (Florida. In this study, we used a team-based instructional approach leveraging the iPlant Collaborative to examine publicly available National Ecological Observatory Network (NEON 16S gene and PLFA measurements that quantify microbial diversity, composition, and growth. Both profiling techniques revealed that microbial communities grouped strongly by ecosystem and were predominately influenced by three edaphic factors: pH, soil water content, and cation exchange capacity. Temporal variability of microbial communities differed by profiling technique; 16S-based community measurements showed significant temporal variability only in the subtropical coniferous forest communities, specifically through changes within subgroups of Acidobacteria. Conversely, PLFA-based community measurements showed seasonal shifts in taiga and tropical broadleaf forest systems. These differences may be due to the premise that 16S-based measurements are predominantly influenced by large shifts in the abiotic soil environment, while PLFA-based analyses reflect the metabolically active fraction of the microbial community, which is more sensitive to local disturbances and biotic interactions. To address the technical issue of the response of soil microbial communities to sample storage temperature, we compared 16S

  17. Aplicaciones del SiC biomórfico como reforzante estructural en hormigones refractarios

    Directory of Open Access Journals (Sweden)

    Sepúlveda, R.

    2005-10-01

    Full Text Available This work is devoted to the study of the time and temperature dependence of the static grain growth in YTZP 4 mol %, with an average grain size within the submicrometric range (> 0.1 μm. Also, the mechanical response in the temperature interval between 1200 ºC and 1500 ºC is analysed. The grain growth is controlled by the yttria segregation at the grain boundaries, which plays a key role in the cationic diffusion processes. Microstructural characterization of both as-received and deformed samples allows to conclude that plastic deformation is due to grain boundary sliding (GBS, with stress exponents increasing with the flow stress, but in all cases they are lower than n = 2.

    Una posible aplicación del SiC biomórfico (bioSiC son los reforzante estructural en hormigones refractarios. En este caso se han fabricado piezas de bioSiC con forma de cilindros alargados, 3-4 mm de diámetro y 30-35 mm de longitud, mediante infiltración reactiva de Si líquido en piezas de carbón obtenidas por pirolización de madera de haya de calidad comercial. Hemos estudiado las características microestructurales y las propiedades mecánicas de los reforzantes, como paso previo al estudio de la aplicación mencionada, de la que se ofrece un avance en este trabajo. Para caracterizar la calidad del material y del proceso de fabricación, la microestructura de las piezas se ha estudiado mediante microscopía electrónica de barrido. Los reforzantes de bioSiC fueron ensayados a compresión uniaxial y flexión en cuatro puntos a temperatura ambiente y a alta temperatura (1250-1400ºC para la determinación de sus propiedades mecánicas, y se realizaron estudios fractográficos en el segundo tipo de ensayos. Subsecuentemente, se prepararon ladrillos refractarios con un 3% en peso de reforzantes de bioSiC, que fueron curados a diferentes temperaturas (máx. 1600ºC. Estos ladrillos se han ensayado en compresión y flexión en tres puntos, a temperatura ambiente

  18. Propiedades mecánicas de SiC biomórfico poroso

    Directory of Open Access Journals (Sweden)

    López Robledo, M. J.

    2005-10-01

    Full Text Available Biomorphic SiC (bioSiC materials fabricated by silicon infiltration of chescoal preforms have been studied. As a result of this process, a porous SiC ceramics with remnant silicon partially filling pores is obtained. This remnant silicon can considerably alter the mechanical properties of the bioSiC but it can be effectively removed by reaction with a mixture of HF and HNO3 producing a clean pororus bioSiC. In this work the comparison of the mechanical properties of bioSiC from preforms of beech, eucalyptus and pine, with and without remanent silicon is studied. High temperature mechanical properties were studied from deformation tests in compression at constant strain rate. Microstructural characterization of the samples, before and after the mechanical tests, was performed by scanning electron microscopy (SEM.

    Se han estudiado carburos de silicio biomórficos (bioSiC fabricados mediante infiltración reactiva de silicio líquido en una preforma de carbón de origen vegetal. Se obtiene así una cerámica porosa de SiC con silicio remanente en sus poros. Este silicio puede alterar considerablemente las propiedades mecánicas de los bioSiC. Este trabajo preliminar se centra en el estudio de las propiedades mecánicas de los bioSiC fabricados a partir de preformas de haya, eucalipto y pino, tras reacción con una disolución de HF y HNO3 que elimina ostensiblemente el silicio residual. Las propiedades mecánicas a altas temperaturas fueron estudiadas a partir de ensayos de compresión a velocidad de deformación constante. La caracterización microestructural del material resultante, antes y después de los ensayos mecánicos, fue realizada mediante Microscopía Electrónica de Barrido (MEB.

  19. Callus production and regeneration of the medicinal plant Papaver ...

    African Journals Online (AJOL)

    Administrator

    2011-09-19

    Sep 19, 2011 ... and morphinan alkaloids production in two species of opium poppy. Biomed. Biotechnol. 1(2): 70-78. Murashige T, Skoog F (1962). A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol. Plant, 15: 473-497. Rao AQ, Hussain SS, Shahzad MS, Bokhari SYA, Raza MH, Rakha ...

  20. Improving Global Gross Primary Productivity Estimates by Computing Optimum Light Use Efficiencies Using Flux Tower Data

    Science.gov (United States)

    Madani, Nima; Kimball, John S.; Running, Steven W.

    2017-11-01

    In the light use efficiency (LUE) approach of estimating the gross primary productivity (GPP), plant productivity is linearly related to absorbed photosynthetically active radiation assuming that plants absorb and convert solar energy into biomass within a maximum LUE (LUEmax) rate, which is assumed to vary conservatively within a given biome type. However, it has been shown that photosynthetic efficiency can vary within biomes. In this study, we used 149 global CO2 flux towers to derive the optimum LUE (LUEopt) under prevailing climate conditions for each tower location, stratified according to model training and test sites. Unlike LUEmax, LUEopt varies according to heterogeneous landscape characteristics and species traits. The LUEopt data showed large spatial variability within and between biome types, so that a simple biome classification explained only 29% of LUEopt variability over 95 global tower training sites. The use of explanatory variables in a mixed effect regression model explained 62.2% of the spatial variability in tower LUEopt data. The resulting regression model was used for global extrapolation of the LUEopt data and GPP estimation. The GPP estimated using the new LUEopt map showed significant improvement relative to global tower data, including a 15% R2 increase and 34% root-mean-square error reduction relative to baseline GPP calculations derived from biome-specific LUEmax constants. The new global LUEopt map is expected to improve the performance of LUE-based GPP algorithms for better assessment and monitoring of global terrestrial productivity and carbon dynamics.

  1. Hydrology of a Water‐Limited Forest under Climate Change Scenarios: The Case of the Caatinga Biome, Brazil

    Directory of Open Access Journals (Sweden)

    Everton Alves Rodrigues Pinheiro

    2017-02-01

    Full Text Available Given the strong interactions between climate and vegetation, climate change effects on natural and agricultural ecosystems are common objects of research. Reduced water availability is predicted to take place across large regions of the globe, including Northeastern Brazil. The Caatinga, a complex tropical water‐limited ecosystem and the only exclusively Brazilian biome, prevails as the main natural forest of this region. The aim of this study was to examine the soil‐water balance for this biome under a climate‐warming scenario and with reduced rainfall. Climate change projections were assessed from regional circulation models earlier applied to the Brazilian territory. A statistical climate data generator was used to compose a synthetic weather dataset, which was later integrated into a hydrological model. Compared to simulations with current climate for the same site, under the scenario with climate change, transpiration was enhanced by 36%, and soilwater evaporation and interception were reduced by 16% and 34%, respectively. The greatest change in soil‐water components was observed for deep drainage, accounting only for 2% of the annual rainfall. Soil‐plant‐atmosphere fluxes seem to be controlled by the top layer (0.0-0.2 m, which provides 80% of the total transpiration, suggesting that the Caatinga forest may become completely soil‐water pulse dominated under scenarios of reduced water availability.

  2. The biogeographic origin of a radiation of trees in Madagascar: implications for the assembly of a tropical forest biome.

    Science.gov (United States)

    Federman, Sarah; Dornburg, Alex; Downie, Alexander; Richard, Alison F; Daly, Douglas C; Donoghue, Michael J

    2015-10-05

    Madagascar's rain forests are characterized by extreme and uneven patterns of species richness and endemicity, the biogeographic and evolutionary origins of which are poorly understood. Here we use a time-calibrated phylogeny of a dominant group of trees in Madagascar's eastern rain forests, Canarium, and related Burseraceae (Canarieae), to test biogeographic hypotheses regarding the origin and radiation of the flora of this unique biome. Our findings strongly support the monophyly of Malagasy Canarium, suggesting that this clade represents a previously undocumented in situ radiation. Contrary to expectations of dispersal from Africa during the Oligocene, concurrent with the formation of Madagascar's rain forest biome, our analyses support a late Miocene origin for Malagasy Canarium, probably by long distance dispersal from Southeast Asia. Our study illustrates the importance of considering long distance dispersal as a viable explanation for clades with pantropical distributions diversifying subsequent to the Oligocene, and it highlights the formation of the Indo-Australian Archipelago and associated fast-moving equatorial surface currents, suggesting an under-appreciated evolutionary link among tropical centers of endemism. We postulate that the relatively recent establishment and radiation of Canarium in Madagascar may have been facilitated by the highly stochastic climates associated with these forest ecosystems.

  3. El ciclo de vida femenino en el saber biomédico: construyendo corporalidades para las mujeres de mediana edad

    Directory of Open Access Journals (Sweden)

    Ana Leticia Fitte

    2011-08-01

    Full Text Available En este trabajo se exploran tanto las nociones del climaterio y la menopausia, elaborados por el modelo biomédico, así como los presupuestos que lo estructuran. Para ello se toman, por un lado, como referente empírico, los relatos de médicos y médicas especialistas en ginecología que desempeñan su labor en consultorios privados de la ciudad de La Plata, Argentina y, por otro lado, la literatura disponible sobre el tema elaborada desde las ciencias sociales. El propósito de dicho análisis es identificar los criterios utilizados para segmentar el ciclo de vida femenino dentro del saber biomédico entendiendo que dichas conceptualizaciones han creado y legitimado un modelo hegemónico acerca de la corporalidad femenina y que las relaciones de género no están desvinculadas de un ciclo vital estandarizado para hombres y mujeres, dentro del cual derechos, obligaciones y posibles usos del cuerpo difieren de una edad a otra.

  4. El ciclo de vida femenino en el saber biomédico: construyendo corporalidades para las mujeres de mediana edad

    Directory of Open Access Journals (Sweden)

    Ana Leticia Fitte

    2010-08-01

    Full Text Available En este trabajo se exploran tanto las nociones del climaterio y la menopausia, elaborados por el modelo biomédico, así como los presupuestos que lo estructuran. Para ello se toman, por un lado, como referente empírico, los relatos de médicos y médicas especialistas en ginecología que desempeñan su labor en consultorios privados de la ciudad de La Plata, Argentina y, por otro lado, la literatura disponible sobre el tema elaborada desde las ciencias sociales. El propósito de dicho análisis es identificar los criterios utilizados para segmentar el ciclo de vida femenino dentro del saber biomédico entendiendo que dichas conceptualizaciones han creado y legitimado un modelo hegemónico acerca de la corporalidad femenina y que las relaciones de género no están desvinculadas de un ciclo vital estandarizado para hombres y mujeres, dentro del cual derechos, obligaciones y posibles usos del cuerpo difieren de una edad a otra.

  5. Uso da rugoscopia palatina como ferramenta biométrica: um estudo populacional em Niterói-RJ, Brasil

    Directory of Open Access Journals (Sweden)

    Igor Iuco CASTRO-SILVA

    Full Text Available Introdução: Pesquisas por métodos biométricos auxiliares em perícias têm crescido na Odontologia Legal. Objetivo: Este estudo avaliou a eficácia da rugoscopia palatina na identificação humana. Material e método: Foram utilizados 184 modelos de gesso de estudantes voluntários em Niterói-RJ, para delineamento de suas rugosidades palatinas, sendo classificadas segundo quantidade, direção (sistema de Carrea e formato individual (sistema de Silva, e comparadas às variáveis demográficas sexo, cor da pele e idade. A análise estatística foi realizada com o teste qui-quadrado para amostras independentes, considerando-se p<0,05. Resultado: Houve maior prevalência de 2-7 rugas em homens. O tipo IV de Carrea e o tipo 1 de Silva foram mais evidentes, porém sem diferenças intergrupos significativas, de acordo com as variáveis propostas. Conclusão: A rugoscopia palatina é uma ferramenta biométrica viável e fornece informações morfológicas individuais relevantes, embora sua análise cega e em tempo único não exiba acurácia na estratificação populacional.

  6. NPP Multi-Biome: Production and Mortality for Eastern U.S. Forests, 1962-1996, R1

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This data set contains two ASCII files (tab-delimited .txt format) that provide annual mean above-ground wood increments for temperate forests in 1,956...

  7. Stormflow influence on nutrient dynamics in micro-catchments under contrasting land use in the Cerrado and Amazon Biomes, Brazil

    Science.gov (United States)

    Edelmann, Katharina; Nóbrega, Rodolfo L. B.; Gerold, Gerhard

    2017-04-01

    The Amazon and Cerrado biomes in Brazil have been under intense land-use change during the past few decades. The conversion of native vegetation to pastures and croplands has caused impacts on hydrological processes in these biomes, resulting in increased streamflow and nutrient fluxes. Our aim was to compare the nutrient dynamics during stormflow events in two pairs of adjacent micro-catchments with similar physical characteristics under contrasting land use, i.e. native vegetation (rainforest or cerrado) and pasture. One pair of catchments was located in the Amazon and the other in the Cerrado, both on the Amazon Agricultural Frontier in the Brazilian states of Mato Grosso and Pará. We collected hydrological and hydrochemical data on 50 stormflow events on a sub-hourly resolution during the wet seasons of 2013 and 2014. We compared the dynamics of total inorganic carbon (TIC), total organic carbon (TOC), dissolved organic carbon (DOC), nitrate (NO3), calcium (Ca), potassium (K), and magnesium (Mg) in different hydrograph parts, i.e. rising limb, peak and recession limb, between the catchments within the same biome. For the Cerrado biome, our findings show that the nutrient concentrations in the stormflows were higher in the pasture catchment than in the cerrado catchment. In the Amazon biome, we found an inverse relationship with higher concentrations in the forest catchment than in the pasture catchment, except for TIC and K. Most nutrients in the cerrado catchment had the highest concentrations in the rising limb. Mg, however, reached highest concentrations during peak discharge, and lowest in the recession limb. In the adjacent pasture catchment, in contrast, the highest nutrient concentrations were observed during the peak discharge (TIC, TOC, Ca) or the recession limb (DOC, NO3, K, Mg) with lowest in the rising limb, except for NO3, which showed the lowest concentrations during peak discharge. In the Amazon forest catchment, the peak discharge showed the

  8. Are There Consistent Grazing Indicators in Drylands? Testing Plant Functional Types of Various Complexity in South Africa’s Grassland and Savanna Biomes

    Science.gov (United States)

    Linstädter, Anja; Schellberg, Jürgen; Brüser, Katharina; Moreno García, Cristian A.; Oomen, Roelof J.; du Preez, Chris C.; Ruppert, Jan C.; Ewert, Frank

    2014-01-01

    Despite our growing knowledge on plants’ functional responses to grazing, there is no consensus if an optimum level of functional aggregation exists for detecting grazing effects in drylands. With a comparative approach we searched for plant functional types (PFTs) with a consistent response to grazing across two areas differing in climatic aridity, situated in South Africa’s grassland and savanna biomes. We aggregated herbaceous species into PFTs, using hierarchical combinations of traits (from single- to three-trait PFTs). Traits relate to life history, growth form and leaf width. We first confirmed that soil and grazing gradients were largely independent from each other, and then searched in each biome for PFTs with a sensitive response to grazing, avoiding confounding with soil conditions. We found no response consistency, but biome-specific optimum aggregation levels. Three-trait PFTs (e.g. broad-leaved perennial grasses) and two-trait PFTs (e.g. perennial grasses) performed best as indicators of grazing effects in the semi-arid grassland and in the arid savanna biome, respectively. Some PFTs increased with grazing pressure in the grassland, but decreased in the savanna. We applied biome-specific grazing indicators to evaluate if differences in grazing management related to land tenure (communal versus freehold) had effects on vegetation. Tenure effects were small, which we mainly attributed to large variability in grazing pressure across farms. We conclude that the striking lack of generalizable PFT responses to grazing is due to a convergence of aridity and grazing effects, and unlikely to be overcome by more refined classification approaches. Hence, PFTs with an opposite response to grazing in the two biomes rather have a unimodal response along a gradient of additive forces of aridity and grazing. The study advocates for hierarchical trait combinations to identify localized indicator sets for grazing effects. Its methodological approach may also be

  9. Are there consistent grazing indicators in Drylands? Testing plant functional types of various complexity in South Africa's Grassland and Savanna Biomes.

    Directory of Open Access Journals (Sweden)

    Anja Linstädter

    Full Text Available Despite our growing knowledge on plants' functional responses to grazing, there is no consensus if an optimum level of functional aggregation exists for detecting grazing effects in drylands. With a comparative approach we searched for plant functional types (PFTs with a consistent response to grazing across two areas differing in climatic aridity, situated in South Africa's grassland and savanna biomes. We aggregated herbaceous species into PFTs, using hierarchical combinations of traits (from single- to three-trait PFTs. Traits relate to life history, growth form and leaf width. We first confirmed that soil and grazing gradients were largely independent from each other, and then searched in each biome for PFTs with a sensitive response to grazing, avoiding confounding with soil conditions. We found no response consistency, but biome-specific optimum aggregation levels. Three-trait PFTs (e.g. broad-leaved perennial grasses and two-trait PFTs (e.g. perennial grasses performed best as indicators of grazing effects in the semi-arid grassland and in the arid savanna biome, respectively. Some PFTs increased with grazing pressure in the grassland, but decreased in the savanna. We applied biome-specific grazing indicators to evaluate if differences in grazing management related to land tenure (communal versus freehold had effects on vegetation. Tenure effects were small, which we mainly attributed to large variability in grazing pressure across farms. We conclude that the striking lack of generalizable PFT responses to grazing is due to a convergence of aridity and grazing effects, and unlikely to be overcome by more refined classification approaches. Hence, PFTs with an opposite response to grazing in the two biomes rather have a unimodal response along a gradient of additive forces of aridity and grazing. The study advocates for hierarchical trait combinations to identify localized indicator sets for grazing effects. Its methodological approach may

  10. Data resources for range-wide assessment of livestock grazing across the sagebrush biome

    Science.gov (United States)

    Assal, T.J.; Veblen, K.E.; Farinha, M.A.; Aldridge, Cameron L.; Casazza, Michael L.; Pyke, D.A.

    2012-01-01

    The data contained in this series were compiled, modified, and analyzed for the U.S. Geological Survey (USGS) report "Range-Wide Assessment of Livestock Grazing Across the Sagebrush Biome." This report can be accessed through the USGS Publications Warehouse (online linkage: http://pubs.usgs.gov/of/2011/1263/). The dataset contains spatial and tabular data related to Bureau of Land Management (BLM) Grazing Allotments. We reviewed the BLM national grazing allotment spatial dataset available from the GeoCommunicator National Integrated Land System (NILS) website in 2007 (http://www.geocommunicator.gov). We identified several limitations in those data and learned that some BLM State and/or field offices had updated their spatial data to rectify these limitations, but maintained the data outside of NILS. We contacted appropriate BLM offices (State or field, 25 in all) to obtain the most recent data, assessed the data, established a data development protocol, and compiled data into a topologically enforced dataset throughout the area of interest for this project (that is, the pre-settlement distribution of Greater Sage-Grouse in the Western United States). The final database includes three spatial datasets: Allotments (BLM Grazing Allotments), OUT_Polygons (nonallotment polygons used to ensure topology), and Duplicate_Polygon_Allotments. See Appendix 1 of the aforementioned report for complete methods. The tabular data presented here consists of information synthesized by the Land Health Standard (LHS) analysis (Appendix 2), and data obtained from the BLM Rangeland Administration System (http://www.blm.gov/ras/). In 2008, available LHS data for all allotments in all regions were compiled by BLM in response to a Freedom of Information Act (FOIA) request made by a private organization. The BLM provided us with a copy of these data. These data provided three major types of information that were of interest: (1) date(s) (if any) of the most recent LHS evaluation for each

  11. Hidroxiapatitas y nanopartículas de óxido de grafeno: respuesta celular y aplicación biomédica

    OpenAIRE

    Matesanz Sancho, María de la Concepción

    2015-01-01

    En la presente Tesis Doctoral Hidroxiapatitas y nanopartículas de óxido de grafeno: Respuesta celular y aplicación biomédica se analizan a nivel celular los efectos de dos tipos de materiales con fines biomédicos muy diferentes: a hidroxiapatitas para regeneración ósea y tratamiento de osteoporosis y b nanopartículas de óxido de grafeno para tratamiento antitumoral por hipertermia. CAPÍTULO I El aumento de la esperanza de vida conlleva una mayor incidencia de patologías asociadas a la edad...

  12. MODIS EVI as a proxy for net primary production across precipitation regimes

    Science.gov (United States)

    Above ground net primary production (ANPP) is a measure of the rate of photosynthesis in an ecosystem, and is indicative of its biomass productivity. Prior studies have reported a relationship between ANPP and annual precipitation which converged across biomes in dry years. This deserves further s...

  13. Shifts in allochthonous input and autochthonous production in streams along an agricultural land-use gradient

    Science.gov (United States)

    Elizabeth Hagen; Matthew McTammany; Jackson Webster; Ernest Benfield

    2010-01-01

    Relative contributions of allochthonous inputs and autochthonous production vary depending on terrestrial land use and biome. Terrestrially derived organic matter and in-stream primary production were measured in 12 headwater streams along an agricultural land-use gradient. Streams were examined to see how carbon (C) supply shifts from forested streams receiving...

  14. Desempenho e medidas biométricas de caprinos de diferentes grupos raciais Performance and body measurements of purebred and crossbred goat kids at different ages

    Directory of Open Access Journals (Sweden)

    Jakilane Jacque Leal de Menezes

    2007-06-01

    Full Text Available Objetivou-se avaliar o desempenho de cabritos de três grupos raciais. Foram considerados nas avaliações o peso, o ganho de peso, as medidas biométricas, a conversão alimentar e o custo de produção relativo à alimentação. Utilizaram-se 41 cabritos, machos e fêmeas, de três grupos raciais (A - Alpino; ½ BA - ½ Boer + ½ Alpino; e ¾ BA - ¾ Boer + ¼ Alpino, avaliados aos 60, 90 e 120 dias em sistema de confinamento. As médias foram comparadas por análise de variância utilizando-se o teste Tukey. O desempenho não diferiu entre os grupos raciais. O escore corporal foi maior nos animais ¾ BA, o que pode representar vantagem econômica ao produtor se esses animais forem comercializados vivos. Com o avanço da idade, houve aumento do comprimento corporal, da altura anterior, da altura posterior, do perímetro torácico, do perímetro da perna, da largura da garupa e da largura do peito. Os machos foram superiores às fêmeas quanto às medidas biométricas e quanto ao peso ao nascimento, aos 60 e aos 90 dias. Os machos Alpinos foram mais pesados aos 120 dias e apresentaram, ainda, maior ganho de peso no intervalo dos 30 aos 60 dias. O menor custo de produção relativo à alimentação por quilograma de cabrito produzido foi observado aos 90 dias de idade.The objective of this trial was to evaluate performance (weight and weight gain, body measurements, feed conversion, and production costs of purebred (Alpine and crossbred [½ Boer + ½ Alpine (½ BA and ¾ Boer + ¼ Alpine (¾ BA] goat kids at different ages (60, 90 and 120 days. Therefore, 41 kids in a feedlot system were used in this study. Data were submitted to analysis of variance using the Tukey test for comparison of means. No difference in performance was observed among the three different groups of animals (Alpine, ½ BA, and ¾ BA. Body condition score was greatest in ¾ BA kids, which may represent additional profit to producers if animals are sold alive. As expected

  15. Science framework for conservation and restoration of the sagebrush biome: Linking the Department of the Interior’s Integrated Rangeland Fire Management Strategy to long-term strategic conservation actions

    Science.gov (United States)

    J.C. Chambers; J.L. Beck; J.B. Bradford; J. Bybee; S. Campbell; J. Carlson; T.J. Christiansen; K.J. Clause; G. Collins; M.R. Crist; J.B. Dinkins; K.E. Doherty; F. Edwards; S. Espinosa; K.A. Griffin; P. Griffin; J.R. Haas; S.E. Hanser; D.W. Havlina; K.F. Henke; J.D. Hennig; L.A. Joyce; F.M. Kilkenny; S.M. Kulpa; L.L. Kurth; J.D. Maestas; M. Manning; K.E. Mayer; B.A. Mealor; C. McCarthy; M. Pellant; M.A. Perea; K.L. Prentice; D.A. Pyke; L.A. Wiechman; A. Wuenschel

    2017-01-01

    The Science Framework is intended to link the Department of the Interior’s Integrated Rangeland Fire Management Strategy with long-term strategic conservation actions in the sagebrush biome. The Science Framework provides a multiscale approach for prioritizing areas for management and determining effective management strategies within the sagebrush biome. The emphasis...

  16. Brazilian Pampa Biome Honey Protects Against Mortality, Locomotor Deficits and Oxidative Stress Induced by Hypoxia/Reperfusion in Adult Drosophila melanogaster.

    Science.gov (United States)

    Cruz, L C; Ecker, A; Dias, R S; Seeger, R L; Braga, M M; Boligon, A A; Martins, I K; Costa-Silva, D G; Barbosa, N V; Cañedo, A D; Posser, T; Franco, J L

    2016-02-01

    We aimed to investigate the potential beneficial effects of the Brazilian Pampa biome honey in a Drosophila-based hypoxia model. Adult flies were reared in standard medium in the presence or absence of honey (at a final concentration of 10 % in medium). Then, control flies (4 % sucrose in medium) and honey-treated flies were submitted to hypoxia. Subsequently, flies were analyzed for mortality, neurolocomotor behavior (negative geotaxis), mitochondrial/oxidative stress parameters and expression of hypoxia/stress related genes by RT-qPCR. The HPLC analysis revealed the presence of phenolics and flavonoids in the studied honey. Caffeic acid was the major compound followed by p-coumaric acid and kaempferol. The presence of such compounds was correlated with a substantial antioxidant activity in vitro. Flies subjected to hypoxia presented marked mortality, locomotor deficits and changes in oxidative stress and mitochondrial activity parameters. Honey treatment was able to completely block mortality and locomotor phenotypes. In addition, honey was able to reverse ROS production and hypoxia-induced changes in mitochondrial complex I and II activity. Hypoxia also induced an up-regulation in mRNA expression of Sima (HIF-1), NFκβ, NRF2, HOX, AKT-1, InR, dILP2, dILP5 and HSP27. Honey treatment was not able to modulate changes in the tested genes, indicating that its protective effects involve additional mechanisms other than transcriptional activity of hypoxia-driven adaptive responses in flies. Our results demonstrated, for the first time, the beneficial effects of honey against the deleterious effects of hypoxia/reperfusion processes in a complex organism.

  17. NPP Multi-Biome: Global Osnabruck Data, 1937-1981, R1

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This data set contains three files. The first file provides net primary productivity (NPP) estimates, vegetation characteristics, and summary climate data...

  18. NPP Multi-Biome: Global IBP Woodlands Data, 1955-1975, R1

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This data set provides four data files containing net primary productivity (NPP) data, edaphic characteristics, average climatic conditions, and basic...

  19. BOREAS RSS-08 BIOME-BGC SSA Simulations of Annual Water and Carbon Fluxes

    Data.gov (United States)

    National Aeronautics and Space Administration — Derived maps of landcover type and crown and stem biomass as model inputs to determine annual evapotranspiration, gross primary production, autotrophic respiration...

  20. NPP Multi-Biome: Global IBP Woodlands Data, 1955-1975, R1

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set provides four data files containing net primary productivity (NPP) data, edaphic characteristics, average climatic conditions, and basic descriptive...

  1. [Responses of Pinus tabulaeformis forest ecosystem in North China to climate change and elevated CO2: a simulation based on BIOME-BGC model and tree-ring data].

    Science.gov (United States)

    He, Jun-Jie; Peng, Xing-Yuan; Chen, Zhen-Ju; Cui, Ming-Xing; Zhang, Xian-Liang; Zhou, Chang-Hong

    2012-07-01

    Based on BIOME-BGC model and tree-ring data, a modeling study was conducted to estimate the dynamic changes of the net primary productivity (NPP) of Pinus tabulaeformis forest ecosystem in North China in 1952-2008, and explore the responses of the radial growth and NPP to regional climate warming as well as the dynamics of the NPP in the future climate change scenarios. The simulation results indicated the annual NPP of the P. tabulaeformis ecosystem in 1952-2008 fluctuated from 244.12 to 645.31 g C x m(-2) x a(-1), with a mean value of 418.6 g C x m(-2) x a(-1) The mean air temperature in May-June and the precipitation from previous August to current July were the main factors limiting the radial growth of P. tabulaeformis and the NPP of P. tabulaeformis ecosystem. In the study period, both the radial growth and the NPP presented a decreasing trend due to the regional warming and drying climate condition. In the future climate scenarios, the NPP would have positive responses to the increase of air temperature, precipitation, and their combination. The elevated CO2 would benefit the increase of the NPP, and the increment would be about 16.1% due to the CO2 fertilization. At both ecosystem and regional scales, the tree-ring data would be an ideal proxy to predict the ecosystem dynamic change, and could be used to validate and calibrate the process-based ecosystem models including BIOME-BGC.

  2. La asignación de recursos y la investigación biomédica

    Directory of Open Access Journals (Sweden)

    Artells Herrero, Juan José

    2001-10-01

    Full Text Available Not available

    Nadie parece cuestionar, al menos desde el punto de vista teórico, que la Investigación junto con la Docencia, son compañeros inseparables del objetivo último de un Sistema Sanitario moderno y consolidado, que no es otro que el de dar respuesta eficiente a las expectativas de salud de las personas. Aspectos como asignación de recursos, priorización, cadena de valor, coste de oportunidad, necesidad, contrato programa, producción conjunta, bien público, reputación, riesgo y especificidad de activos, se tratan a lo largo del artículo. Los recursos que a tal fin se asignen, la valoración de prioridades y el análisis conceptual de lo que cabe considerar como investigación biomédica, son objeto de tratamiento en esta exposición.

  3. Circulation of canine parvovirus among dogs living in human-wildlife interface in the Atlantic forest biome, Brazil

    Directory of Open Access Journals (Sweden)

    Flávia V. Vieira

    2017-12-01

    Full Text Available Despite of the role of domestic dogs as reservoirs for threatening viral diseases for wild carnivores, few studies have focused to identify circulation of viruses among dogs living in human/wildlife interfaces. To identify canine parvovirus (CPV types circulating in dogs living in an Atlantic forest biome, faecal samples (n = 100 were collected at the same period (one week corresponding to each of four areas, during 2014 to 2016 and corresponded to 100 different individuals. CPV was isolated in cell culture from 67 out 100 (67% samples from healthy dogs. Cytopathic effects were characterized by total or partial cell culture lysis. Genome sequences of CPV-2a (10%, CPV-2b (7% and CPV-2c (50% were concomitantly detected by PCR and nucleotide sequencing. The current study addresses the importance of monitoring CPV circulation among dogs presenting potential contact with wildlife species.

  4. Adapting a rapid assessment protocol to environmentally assess palm swamp (Veredas) springs in the Cerrado biome, Brazil.

    Science.gov (United States)

    Guimarães, Ariane; de Lima Rodrigues, Aline Sueli; Malafaia, Guilherme

    2017-10-30

    The exploitation and degradation of natural environments exert intense pressure on important ecosystems worldwide. Thus, it is necessary developing or adapting assessment methods to monitor environmental changes and to generate results to be applied to environmental management programs. The Brazilian Veredas (phytophysiognomies typical to the Cerrado biome) are threatened by several human activities; thus, the aim of the present study is to adapt a rapid assessment protocol (RAP) to be applied to Veredas springs, by using the upper course of the Vai-e-Vem stream watershed (Ipameri County, Goiás State, Brazil). Therefore, several springs in the study site were visited and 11 of them were considered Veredas springs. After the RAP was adapted, the instrument was validated and used to environmentally assess the springs in order to demonstrate its applicability. The present study has provided an instrument of option to monitor Veredas springs.

  5. New records of mites (Acari: Spinturnicidae) associated with bats (Mammalia, Chiroptera) in two Brazilian biomes: Pantanal and Caatinga.

    Science.gov (United States)

    de Almeida, Juliana Cardoso; Martins, Mayara Almeida; Guedes, Patrícia Gonçalves; Peracchi, Adriano Lucio; Serra-Freire, Nicolau Maues

    2016-01-01

    A first survey of mite species that ectoparasitize bats in the states of Ceará and Mato Grosso was conducted. The specimens of bats and their mites were collected in areas of the Caatinga and Pantanal biomes. A total of 450 spinturnicids representing two genera and ten species was collected from 15 bat species in the Private Reserve of the Natural Patrimony Serra das Almas, Ceará State, Northeast Brazil and 138 spinturnicids represented by two genera and four species were found in seven bats species collected in Private Reserve of the Natural Patrimony Sesc Pantanal, Mato Grosso State, Central-Western Brazil. The occurrence of Cameronieta genus and the species Mesoperiglischrus natali as well as four new associations (Periglischrus iheringi - Chiroderma vizottoi; P. micronycteridis - Micronycteris sanborni; P. paracutisternus - Trachops cirrhosus; Spinturnix americanus - Myotis riparius) are registered for the first time in Brazil.

  6. Four new Penicillium species isolated from the fynbos biome in South Africa, including a multigene phylogeny of section Lanata-Divaricata

    NARCIS (Netherlands)

    Visagie, Cobus; Houbraken, J.; Seifert, K.A.; Samson, R.A.; Jacobs, Karin

    2015-01-01

    A survey of the fynbos biome of South Africa resulted in the isolation and characterization of 61 distinct Penicillium species. ITS barcodes place six of these in section Lanata-Divaricata. Based on morphology and multigene phylogenies, species were identified as P. oxalicum, P. skrjabinii, and four

  7. Soil Acidobacterial 16S rRNA Gene Sequences Reveal Subgroup Level Differences between Savanna-Like Cerrado and Atlantic Forest Brazilian Biomes

    Directory of Open Access Journals (Sweden)

    Elisa C. P. Catão

    2014-01-01

    Full Text Available 16S rRNA sequences from the phylum Acidobacteria have been commonly reported from soil microbial communities, including those from the Brazilian Savanna (Cerrado and the Atlantic Forest biomes, two biomes that present contrasting characteristics of soil and vegetation. Using 16S rRNA sequences, the present work aimed to study acidobacterial diversity and distribution in soils of Cerrado savanna and two Atlantic forest sites. PCA and phylogenetic reconstruction showed that the acidobacterial communities found in “Mata de galeria” forest soil samples from the Cerrado biome have a tendency to separate from the other Cerrado vegetation microbial communities in the direction of those found in the Atlantic Forest, which is correlated with a high abundance of Acidobacteria subgroup 2 (GP2. Environmental conditions seem to promote a negative correlation between GP2 and subgroup 1 (GP1 abundance. Also GP2 is negatively correlated to pH, but positively correlated to high Al3+ concentrations. The Cerrado soil showed the lowest Acidobacteria richness and diversity indexes of OTUs at the species and subgroups levels when compared to Atlantic Forest soils. These results suggest specificity of acidobacterial subgroups to soils of different biomes and are a starting point to understand their ecological roles, a topic that needs to be further explored.

  8. Assessment of water pollution in the Brazilian Pampa biome by means of stress biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii (Anura: Hylidae)

    Science.gov (United States)

    Santos, TG; Melo, R; Costa-Silva, DG; Nunes, MEM; Rodrigues, NR

    2015-01-01

    The Brazilian Pampa biome is currently under constant threat due to increase of agriculture and improper management of urban effluents. Studies with a focus on the assessment of impacts caused by human activities in this biome are scarce. In the present study, we measured stress-related biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii, an endemic species to the Pampa biome, and tested its suitability as a bioindicator for the assessment of potential aquatic contamination in selected ponds (S1 and S2) nearby agricultural areas in comparison to a reference site. A significant decrease in acetylcholinesterase activity was observed in S2 when compared to S1 and reference. The levels of total-hydroperoxides were increased in S2 site. In parallel, increased activity of the antioxidant enzymes catalase, superoxide dismutase and glutathione S-transferase were observed in S2 when compared to S1 and reference. Further studies are necessary in order to correlate the changes observed here with different chemical stressors in water, as well as to elucidate mechanisms of toxicity induced by pesticides in amphibian species endemic to the Pampa biome. Nevertheless, our study validates Phyllomedusa iheringii as a valuable bioindicator in environmental studies. PMID:26056614

  9. Assessment of water pollution in the Brazilian Pampa biome by means of stress biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii (Anura: Hylidae

    Directory of Open Access Journals (Sweden)

    TG Santos

    2015-06-01

    Full Text Available The Brazilian Pampa biome is currently under constant threat due to increase of agriculture and improper management of urban effluents. Studies with a focus on the assessment of impacts caused by human activities in this biome are scarce. In the present study, we measured stress-related biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii, an endemic species to the Pampa biome, and tested its suitability as a bioindicator for the assessment of potential aquatic contamination in selected ponds (S1 and S2 nearby agricultural areas in comparison to a reference site. A significant decrease in acetylcholinesterase activity was observed in S2 when compared to S1 and reference. The levels of total-hydroperoxides were increased in S2 site. In parallel, increased activity of the antioxidant enzymes catalase, superoxide dismutase and glutathione S-transferase were observed in S2 when compared to S1 and reference. Further studies are necessary in order to correlate the changes observed here with different chemical stressors in water, as well as to elucidate mechanisms of toxicity induced by pesticides in amphibian species endemic to the Pampa biome. Nevertheless, our study validates Phyllomedusa iheringii as a valuable bioindicator in environmental studies.

  10. Assessment of water pollution in the Brazilian Pampa biome by means of stress biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii (Anura: Hylidae).

    Science.gov (United States)

    Santos, T G; Melo, R; Costa-Silva, D G; Nunes, Mem; Rodrigues, N R; Franco, J L

    2015-01-01

    The Brazilian Pampa biome is currently under constant threat due to increase of agriculture and improper management of urban effluents. Studies with a focus on the assessment of impacts caused by human activities in this biome are scarce. In the present study, we measured stress-related biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii, an endemic species to the Pampa biome, and tested its suitability as a bioindicator for the assessment of potential aquatic contamination in selected ponds (S1 and S2) nearby agricultural areas in comparison to a reference site. A significant decrease in acetylcholinesterase activity was observed in S2 when compared to S1 and reference. The levels of total-hydroperoxides were increased in S2 site. In parallel, increased activity of the antioxidant enzymes catalase, superoxide dismutase and glutathione S-transferase were observed in S2 when compared to S1 and reference. Further studies are necessary in order to correlate the changes observed here with different chemical stressors in water, as well as to elucidate mechanisms of toxicity induced by pesticides in amphibian species endemic to the Pampa biome. Nevertheless, our study validates Phyllomedusa iheringii as a valuable bioindicator in environmental studies.

  11. BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases.

    Science.gov (United States)

    Xu, Yanjun; Yang, Haixiu; Wu, Tan; Dong, Qun; Sun, Zeguo; Shang, Desi; Li, Feng; Xu, Yingqi; Su, Fei; Liu, Siyao; Zhang, Yunpeng; Li, Xia

    2017-01-01

    BioM2MetDisease is a manually curated database that aims to provide a comprehensive and experimentally supported resource of associations between metabolic diseases and various biomolecules. Recently, metabolic diseases such as diabetes have become one of the leading threats to people’s health. Metabolic disease associated with alterations of multiple types of biomolecules such as miRNAs and metabolites. An integrated and high-quality data source that collection of metabolic disease associated biomolecules is essential for exploring the underlying molecular mechanisms and discovering novel therapeutics. Here, we developed the BioM2MetDisease database, which currently documents 2681 entries of relationships between 1147 biomolecules (miRNAs, metabolites and small molecules/drugs) and 78 metabolic diseases across 14 species. Each entry includes biomolecule category, species, biomolecule name, disease name, dysregulation pattern, experimental technique, a brief description of metabolic disease-biomolecule relationships, the reference, additional annotation information etc. BioM2MetDisease provides a user-friendly interface to explore and retrieve all data conveniently. A submission page was also offered for researchers to submit new associations between biomolecules and metabolic diseases. BioM2MetDisease provides a comprehensive resource for studying biology molecules act in metabolic diseases, and it is helpful for understanding the molecular mechanisms and developing novel therapeutics for metabolic diseases. http://www.bio-bigdata.com/BioM2MetDisease/. © The Author(s) 2017. Published by Oxford University Press.

  12. Soil Acidobacterial 16S rRNA Gene Sequences Reveal Subgroup Level Differences between Savanna-Like Cerrado and Atlantic Forest Brazilian Biomes.

    Science.gov (United States)

    Catão, Elisa C P; Lopes, Fabyano A C; Araújo, Janaína F; de Castro, Alinne P; Barreto, Cristine C; Bustamante, Mercedes M C; Quirino, Betania F; Krüger, Ricardo H

    2014-01-01

    16S rRNA sequences from the phylum Acidobacteria have been commonly reported from soil microbial communities, including those from the Brazilian Savanna (Cerrado) and the Atlantic Forest biomes, two biomes that present contrasting characteristics of soil and vegetation. Using 16S rRNA sequences, the present work aimed to study acidobacterial diversity and distribution in soils of Cerrado savanna and two Atlantic forest sites. PCA and phylogenetic reconstruction showed that the acidobacterial communities found in "Mata de galeria" forest soil samples from the Cerrado biome have a tendency to separate from the other Cerrado vegetation microbial communities in the direction of those found in the Atlantic Forest, which is correlated with a high abundance of Acidobacteria subgroup 2 (GP2). Environmental conditions seem to promote a negative correlation between GP2 and subgroup 1 (GP1) abundance. Also GP2 is negatively correlated to pH, but positively correlated to high Al(3+) concentrations. The Cerrado soil showed the lowest Acidobacteria richness and diversity indexes of OTUs at the species and subgroups levels when compared to Atlantic Forest soils. These results suggest specificity of acidobacterial subgroups to soils of different biomes and are a starting point to understand their ecological roles, a topic that needs to be further explored.

  13. Scale and the isotopic record of C4 plants in pedogenic carbonate: from the biome to the rhizospere.

    Energy Technology Data Exchange (ETDEWEB)

    Monger, Dr. H Curtis [New Mexico State University, Las Cruces; Cole, David R [ORNL; Buck, Dr. Brenda [University of Nevada, Las Vegas; Gallegos, Robert [Sant fe Water Division

    2009-01-01

    The 13C/12C ratio in pedogenic carbonate (i.e., CaCO3 formed in soil) is a significant tool for investigating C4 biomes of the past. However, the paleoecological meaning of d13C values in pedogenic carbonate can change with the scale at which one considers the data. We describe studies of modern soils, fossil soils, and vegetation change in the Chihuahuan Desert of North America and elsewhere that reveal four scales important for paleoecologic interpretations. (1) At the broadest scale, the biome scale (hundreds to millions of km2), an isotopic record interpreted as C3 vegetation replacing C4 grasslands may indicate invading C3 woody shrubs instead of expanding C3 forests (a common interpretation). (2) At the landscape scale (several tens of m2 to hundreds of km2), the accuracy of scaling up paleoclimatic interpretations to a regional level is affected by the landform containing the isotopic record. (3) At the soil-profile scale (cm2 to m2), soil profiles with multiple generations of carbonate mixed together have a lower-resolution paleoecologic record than soil profiles repeatedly buried. (4) At the rhizosphere scale (lm2 to cm2), carbonate formed on roots lack the 14 17 enrichment observed at broader scales, revealing different fractionation processes at different scales. A multi-scale approach in dealing with d13C in pedogenic carbonate will increase the accuracy of paleoecologic interpretations and understanding of soil geomorphic climatic interactions that affect boundaries between C4 and C3 vegetation.

  14. Population Genetic Structure of Cnesterodon decemmaculatus (Poeciliidae: A Freshwater Look at the Pampa Biome in Southern South America

    Directory of Open Access Journals (Sweden)

    Aline M. C. Ramos-Fregonezi

    2017-12-01

    Full Text Available The Pampas is a Neotropical biome formed primarily by low altitude grasslands and encompasses the southernmost portion of Brazil, Uruguay, and part of Argentina. Despite the high level of endemism, and its significant environmental heterogeneity, Pampean species are underrepresented in phylogeographic studies, especially aquatic organisms. The Pampean hydrological system resulted from a long history of tectonism, climate, and sea level changes since the Neogene. In this study, we examined the population genetic structure of Cnesterodon decemmaculatus, a freshwater fish species that occurs throughout most of the Pampa biome. We characterized mitochondrial and autosomal genetic lineages in populations sampled from Southern Brazil and Uruguay to investigate (1 the correspondence between current drainage systems and evolutionary lineages, (2 the demographic history for each genetic lineage, and (3 the temporal depth of these lineages. Overall, we found that the major evolutionary lineages in this species are strongly related to the main Pampean drainage systems, even though stream capture events may have affected the distribution of genetic lineages among drainages. There was evidence for recent population growth in the lineages occupying drainages closest to the shore, which may indicate the effect of quaternary sea-level changes. In general, divergence time estimates among evolutionary lineages were shallow, ranging from 20,000 to 800,000 years before present, indicating a geologically recent history for this group, as previously reported in other Pampean species. A Bayesian phylogeographical reconstruction suggested that an ancestral lineage probably colonized the Uruguay River Basin, and then expanded throughout the Pampas. This evolutionary scenario may represent useful starting models for other freshwater species having a similar distribution.

  15. Scale and the isotopic record of C4 plants in pedogenic carbonate: from the biome to the rhizosphere

    Energy Technology Data Exchange (ETDEWEB)

    Monger, Dr. H Curtis [New Mexico State University, Las Cruces; Cole, David [Ohio State University; Buck, Dr. Brenda [University of Nevada, Las Vegas; Gallegos, Robert [Sant fe Water Division

    2009-01-01

    The 13C/12C ratio in pedogenic carbonate (i.e., CaCO3 formed in soil) is a significant tool for investigating C4 biomes of the past. However, the paleoecological meaning of d13C values in pedogenic carbonate can change with the scale at which one considers the data. We describe studies of modern soils, fossil soils, and vegetation change in the Chihuahuan Desert of North America and elsewhere that reveal four scales important for paleoecologic interpretations. (1) At the broadest scale, the biome scale (hundreds to millions of km2), an isotopic record interpreted as C3 vegetation replacing C4 grasslands may indicate invading C3 woody shrubs instead of expanding C3 forests (a common interpretation). (2) At the landscape scale (several tens of m2 to hundreds of km2), the accuracy of scaling up paleoclimatic interpretations to a regional level is affected by the landform containing the isotopic record. (3) At the soil-profile scale (cm2 to m2), soil profiles with multiple generations of carbonate mixed together have a lower-resolution paleoecologic record than soil profiles repeatedly buried. (4) At the rhizosphere scale (lm2 to cm2), carbonate formed on roots lack the 14 17 enrichment observed at broader scales, revealing different fractionation processes at different scales. A multi-scale approach in dealing with d13C in pedogenic carbonate will increase the accuracy of paleoecologic interpretations and understanding of soil geomorphic climatic interactions that affect boundaries between C4 and C3 vegetation.

  16. Investigación biomédica, intereses económicos y divulgación periodística

    Directory of Open Access Journals (Sweden)

    Roberto Germán Zurriaráin

    2017-01-01

    Full Text Available Este artículo pretende afirmar que toda investigación, especialmente la biomédica, para que sea precisamente tal, tiene que poseer una dimensión ética. Y goza de esta dimensión siempre y cuando vaya en beneficio del propio ser humano. Sin ella no se puede hablar de progreso en la investigación biomédica. Luego, solamente se puede denominar “progreso” si hablamos de una investigación que vaya en beneficio de cada uno de los seres humanos. Así es, la investigación biomédica se tiene que traducir en un avanzar del ser humano en humanidad. Pero desgracia- damente muchas veces no ocurre esto. Se llama investigación biomédica a todo, independien- temente de que posea o no una dimensión ética, considerada esta como una instancia exterior. Esta dimensión, insertada en la propia investigación biomédica, es sustituida por otros intere- ses, sobre todo de carácter económico, especialmente en reproducción humana artificial. Así también, los medios de comunicación social hacen eco de este tipo de estudios en biomedicina. Pero muchas veces los medios buscan más las emociones del espectador que su responsabilidad por transmitir noticias con rigor y veracidad.

  17. NPP Multi-Biome: Global Osnabruck Data, 1937-1981, R1

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set contains three files. The first file provides net primary productivity (NPP) estimates, vegetation characteristics, and summary climate data for 720...

  18. NPP Multi-Biome: Gridded Estimates for Selected Regions Worldwide, 1954-1998, R3

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set provides two data files (.csv format) containing gridded (0.5-degree) estimates of net primary productivity (NPP), elevation, temperature,...

  19. NPP Multi-Biome: Grassland, Boreal Forest, and Tropical Forest Sites, 1939-1996, R1

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set contains one data file (.csv format) that provides net primary productivity (NPP) estimates for 34 grasslands, 14 tropical forests, and 5 boreal forest...

  20. NPP Multi-Biome: Grassland, Boreal Forest, and Tropical Forest Sites, 1939-1996, R1

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This data set contains one data file (.csv format) that provides net primary productivity (NPP) estimates for 34 grasslands, 14 tropical forests, and 5...

  1. Protective shade, tree diversity and soil properties in coffee agroforestry systems in the Atlantic Rainforest biome.

    NARCIS (Netherlands)

    Souza, de H.N.; Goede, de R.G.M.; Brussaard, L.; Cardoso, I.M.; Duarte, E.M.G.; Fernandes, R.B.A.; Gomes, L.C.; Pulleman, M.M.

    2012-01-01

    Sustainable production and biodiversity conservation can be mutually supportive in providing multiple ecosystem services to farmers and society. This study aimed to determine the contribution of agroforestry systems, as tested by family farmers in the Brazilian Rainforest region since 1993, to tree

  2. Differentiating moss from higher plants is critical in studying the carbon cycle of the boreal biome

    DEFF Research Database (Denmark)

    Yuan, Wenping; Liu, Shuguang; Dong, Wenjie

    2014-01-01

    The satellite-derived normalized difference vegetation index (NDVI), which is used for estimating gross primary production (GPP), often includes contributions from both mosses and vascular plants in boreal ecosystems. For the same NDVI, moss can generate only about one-third of the GPP that vascu......The satellite-derived normalized difference vegetation index (NDVI), which is used for estimating gross primary production (GPP), often includes contributions from both mosses and vascular plants in boreal ecosystems. For the same NDVI, moss can generate only about one-third of the GPP...... in a substantial overestimation. The magnitude of this overestimation could have important implications regarding a change from a current carbon sink to a carbon source in the boreal region. Moss abundance, associated with ecosystem disturbances, needs to be mapped and incorporated into GPP estimates in order...

  3. Estimating climate change effects on net primary production of rangelands in the United States

    Science.gov (United States)

    Matthew C. Reeves; Adam L. Moreno; Karen E. Bagne; Steven W. Running

    2014-01-01

    The potential effects of climate change on net primary productivity (NPP) of U.S. rangelands were evaluated using estimated climate regimes from the A1B, A2 and B2 global change scenarios imposed on the biogeochemical cycling model, Biome-BGC from 2001 to 2100. Temperature, precipitation, vapor pressure deficit, day length, solar radiation, CO2 enrichment and nitrogen...

  4. Biome-Scale Forest Properties in Amazonia Based on Field and Satellite Observations

    Directory of Open Access Journals (Sweden)

    Liana O. Anderson

    2012-05-01

    Full Text Available Amazonian forests are extremely heterogeneous at different spatial scales. This review intends to present the large-scale patterns of the ecosystem properties of Amazonia, and focuses on two parts of the main components of the net primary production: the long-lived carbon pools (wood and short-lived pools (leaves. First, the focus is on forest biophysical properties, and secondly, on the macro-scale leaf phenological patterns of these forests, looking at field measurements and bringing into discussion the recent findings derived from remote sensing dataset. Finally, I discuss the results of the three major droughts that hit Amazonia in the last 15 years. The panorama that emerges from this review suggests that slow growing forests in central and eastern Amazonia, where soils are poorer, have significantly higher above ground biomass and higher wood density, trees are higher and present lower proportions of large-leaved species than stands in northwest and southwest Amazonia. However, the opposite pattern is observed in relation to forest productivity and dynamism, which is higher in western Amazonia than in central and eastern forests. The spatial patterns on leaf phenology across Amazonia are less marked. Field data from different forest formations showed that new leaf production can be unrelated to climate seasonality, timed with radiation, timed with rainfall and/or river levels. Oppositely, satellite images exhibited a large-scale synchronized peak in new leaf production during the dry season. Satellite data and field measurements bring contrasting results for the 2005 drought. Discussions on data processing and filtering, aerosols effects and a combined analysis with field and satellite images are presented. It is suggested that to improve the understanding of the large-scale patterns on Amazonian forests, integrative analyses that combine new technologies in remote sensing and long-term field ecological data are imperative.

  5. Habitat use and home range of brown-nosed coati, Nasua nasua (Carnivora: Procyonidae in the Brazilian Cerrado biome

    Directory of Open Access Journals (Sweden)

    Roberto Guilherme Trovati

    2010-09-01

    Full Text Available The brown-nosed coati (Nasua nasua is a carnivorous species found in all the Brazilian biomes, some of which are endangered areas. The aim of this work was to determine the habitat use and selection, home range and core area of N. nasua in the Cerrado biome, central region of Tocantins, Brazil. The study was carried out in an area of approximately 20 000ha from May 2000 to July 2002. A total of seven box traps were placed in the area for 13 months, three of 11 captured animals were followed and monitored by radio-tracking during 13 months. The monitoring was conducted once a day, three times a week using a car and walking through the study area (radio-tracking and visual contact. The results demonstrate that these three males used more frequently the gallery forest formation, followed by cerrado and wetlands. The use of gallery forest by these animals indicated an habitat selection (Proportion test, z=12.98, p< 0.01. Besides, adult males used the gallery forest more frequently (Fisher’s exact test, p<0.01 and wetlands less frequently (Fisher’s exact test, p<0.01 than juvenile males, without significant differences between animal ages for cerrado percentage of habitat use. Besides, results also showed a gallery forest selection by adult (Proportion test z= 13.62, p<0.01 and juvenile (Proportion test z=2.68, p<0.01 males, and a wetland selection by the juvenile male (Proportion test z=3.90, p<0.01. The home ranges varied from 2.20 to 7.55km² for the Minimum Convex Polygon 100% (MCP 100% and from 4.38 to 13.32km² for the Harmonic Mean 95% (HM 95%. The smallest home range overlap occurred between the adult males (Nm1 and Nm3, and the greatest between the juvenile Njm2 and the adult Nm1. The average of the core area (HM 75% for the three monitored animals represented 21.29% of the home range calculated with HM 95%. No overlap between core areas was observed for adult males, but, it was an overlap between the core area of the juvenile male and

  6. Habitat use and home range of brown-nosed coati, Nasua nasua (Carnivora: Procyonidae) in the Brazilian Cerrado biome.

    Science.gov (United States)

    Trovati, Roberto Guilherme; Brito, Bernardo Alves de; Duarte, José Maurício Barbanti

    2010-09-01

    The brown-nosed coati (Nasua nasua) is a carnivorous species found in all the Brazilian biomes, some of which are endangered areas. The aim of this work was to determine the habitat use and selection, home range and core area of N. nasua in the Cerrado biome, central region of Tocantins, Brazil. The study was carried out in an area of approximately 20 000ha from May 2000 to July 2002. A total of seven box traps were placed in the area for 13 months, three of 11 captured animals were followed and monitored by radio-tracking during 13 months. The monitoring was conducted once a day, three times a week using a car and walking through the study area (radio-tracking and visual contact). The results demonstrate that these three males used more frequently the gallery forest formation, followed by cerrado and wetlands. The use of gallery forest by these animals indicated an habitat selection (Proportion test, z=12.98, pgallery forest more frequently (Fisher's exact test, pgallery forest selection by adult (Proportion test z=13.62, p<0.01) and juvenile (Proportion test z=2.68, p<0.01) males, and a wetland selection by the juvenile male (Proportion test z=3.90, p<0.01). The home ranges varied from 2.20 to 7.55km2 for the Minimum Convex Polygon 100% (MCP 100%) and from 4.38 to 13.32km2 for the Harmonic Mean 95% (HM 95%). The smallest home range overlap occurred between the adult males (Nm1 and Nm3), and the greatest between the juvenile Njm2 and the adult Nm1. The average of the core area (HM 75%) for the three monitored animals represented 21.29% of the home range calculated with HM 95%. No overlap between core areas was observed for adult males, but, it was an overlap between the core area of the juvenile male and its band with that of the two adult males. The present study provides new data on core area size and frequency habitat use by adult and juvenile males of N. nasua in the Brazilian Cerrado, that may support conservation efforts.

  7. Estudio de la Citotoxicidad de Cerámicas Biomórficas de SiC Recubiertas con Vidrio Bioactivo

    Directory of Open Access Journals (Sweden)

    Borrajo, J. P.

    2006-04-01

    Full Text Available In the past years there was a need to develop new tough bioactive materials capable to resist high loads when implanted in the body, that led to the production of bioactive coatings on metallic substrates. A new approach, which consists of biomorphic silicon carbide (SiC coated with bioactive glass by Pulsed Laser Deposition (PLD, was recently presented. This new material joins the high mechanical strength, lightness and porosity of biomorphic SiC and the bioactive properties of PLD glass films. In this work, a multiple evaluation of this new material is presented starting from the biomorphic SiC morphology and porosity, following with the bioactivity in simulated body fluid of the coatings, and ending with a deep in vitro study with MG-63 cells. The citotoxicity of the SiC coated and uncoated and the cell proliferation and attachment were studied.

    La necesidad de desarrollar nuevos implantes basados en materiales bioactivos que sean capaces de soportar grandes cargas mecánicas ha llevado a la producción de sustratos metálicos recubiertos con cerámicas bioactivas. Recientemente se ha propuesto un dispositivo alternativo que consiste en un sustrato de carburo de silicio (SiC biomórfico recubierto con vidrio bioactivo, mediante la técnica de Depósito por Láser Pulsado (PLD, y que dispone de la resistencia mecánica adecuada, además de gran ligereza y una porosidad intrínseca muy favorable de cara a la implantación. En este trabajo se presenta un estudio interdisciplinar de este nuevo material centrado en la morfología y porosidad de sustratos de SiC provenientes de diferentes maderas, la bioactividad de los recubrimientos producidos por PLD y en la evaluación in vitro con células de osteosarcoma MG-63 con la que se ha determinado la citotoxicidad de estos materiales y se ha estudiado la influencia de los mismos en la adhesión y la proliferación celular.

  8. Simulating carbon and water cycles of larch forests in East Asia by the BIOME-BGC model with AsiaFlux data

    Directory of Open Access Journals (Sweden)

    M. Ueyama

    2010-03-01

    Full Text Available Larch forests are widely distributed across many cool-temperate and boreal regions, and they are expected to play an important role in global carbon and water cycles. Model parameterizations for larch forests still contain large uncertainties owing to a lack of validation. In this study, a process-based terrestrial biosphere model, BIOME-BGC, was tested for larch forests at six AsiaFlux sites and used to identify important environmental factors that affect the carbon and water cycles at both temporal and spatial scales.

    The model simulation performed with the default deciduous conifer parameters produced results that had large differences from the observed net ecosystem exchange (NEE, gross primary productivity (GPP, ecosystem respiration (RE, and evapotranspiration (ET. Therefore, we adjusted several model parameters in order to reproduce the observed rates of carbon and water cycle processes. This model calibration, performed using the AsiaFlux data, substantially improved the model performance. The simulated annual GPP, RE, NEE, and ET from the calibrated model were highly consistent with observed values.

    The observed and simulated GPP and RE across the six sites were positively correlated with the annual mean air temperature and annual total precipitation. On the other hand, the simulated carbon budget was partly explained by the stand disturbance history in addition to the climate. The sensitivity study indicated that spring warming enhanced the carbon sink, whereas summer warming decreased it across the larch forests. The summer radiation was the most important factor that controlled the carbon fluxes in the temperate site, but the VPD and water conditions were the limiting factors in the boreal sites. One model parameter, the allocation ratio of carbon between belowground and aboveground, was site-specific, and it was negatively correlated with the annual climate of annual mean air temperature and total precipitation

  9. Correlação entre parâmetros biométricos e produtivos em colônias de Melipona quadrifasciata anthidioides Lepeletier (Hymenoptera: Apidae)

    OpenAIRE

    Faquinello, Patricia; Brito, Baden Bell Pereira; Carvalho, Carlos Alfredo Lopes de; Paula-Leite, Meiby Carneiro de; Alves, Rogerio Marcos de Oliveira

    2013-01-01

    Em colônias de melíponas, características biométricas podem estar associadas às características de produção; portanto, o estudo da correlação é de grande valia como ferramenta para o processo de seleção de colônias. O objetivo deste trabalho foi estimar as correlações entre os parâmetros biométricos e produtivos de Melipona quadrifasciata anthidioides. Foram analisadas 128 colônias, provenientes de 60 colônias parentais e duas gerações, F1 e F2. Os parâmetros avaliados foram: peso da rainha e...

  10. Seed inoculation with Azospirillum brasilense and N fertilization of corn in the Cerrado biome

    Directory of Open Access Journals (Sweden)

    Ana Carolina Pereira de Vasconcelos

    Full Text Available ABSTRACT There is a great interest to reduce doses and increase efficiency of inputs in agriculture. One alternative to lower doses of N fertilizers in corn is seed inoculation with diazotrophic bacteria, which can fix atmospheric N in soil. This study aimed to evaluate the effect of N doses-in the absence and presence of Azospirillum brasilense-on plant nutritional status at different growth stages and on seed yield of corn. The experiment was conducted during the 2011/2012 production season on a typical cerrado soil in Uberlândia, Triângulo Mineiro. The experimental design was randomized blocks with six repetitions. The treatments consisted of five N doses and the absence or presence of Azospirillum brasilense (100 mL ha-1 as a seed inoculant. A commercial product with minimum concentration of 2x108 CFU mL-1 100 mL ha-1 was used. Inoculation with Azospirillum brasilense did not significantly affect corn macronutrient content and yield, except for foliar calcium and potassium at 200 kg N ha-1 at the V8 stage. Corn yield increased with N doses up to 150 kg N ha-1.

  11. Effect of extracellular adenosine triphosphate on activity of osteoblast like cells - biomed 2013.

    Science.gov (United States)

    Mehta, Siddhant K; Tucci, Michelle A; Benghuzzi, Hamed A

    2013-01-01

    Platelet dense granules contain serotonin, adenosine triphosphate (ATP), and adenosine diphosphate (ADP). These molecules are present in platelet rich plasma (PRP), and may therefore have an impact on the efficacy of PRP therapy. Additionally, nucleotides are important extracellular signaling molecules in a variety of tissue types including bone. The purpose of this investigation was to evaluate the in vitro dose-dependent effects of extracellular adenosine triphosphate (ATP) exposure on activity of human osteoblast-like cells. MG-63 cells were exposed to phosphate buffered saline (control group) or ATP solution (20 µM, 100µM, 200 µM). Osteoblast viability was evaluated at 24, 48, and 72 hours using nonspecific and osteoblast-specific markers and cellular morphology. No significant differences in total protein, malonlydialdehyde (MDA), or glutathione were observed with ATP exposure at any timepoint. High dose ATP exposure resulted in a significantly higher production of nitric oxide compared to controls and other groups. With respect to alkaline phosphatase activity and osteopontin production, no significant differences were present with ATP exposure. Overall conclusion: Extracellular ATP exposure modulated osteoblast activity with no change in cell viability in vitro.

  12. Selection of efficient rhizobial symbionts for Cratylia argentea in the cerrado biome

    Directory of Open Access Journals (Sweden)

    Giovanna Moura Calazans

    2016-01-01

    Full Text Available ABSTRACT: Cratylia argentea is a leguminous shrub native to the cerrado, which has great potential for forage production and recovery of degraded areas. This study aimed to isolate, characterize, and select efficient rhizobial strains in symbiosis with Cratylia argentea . Rhizobacteria were isolated from the nodules of 12-month-old plants and cultivated in pots containing cerrado soil. Twenty-five bacterial strains were obtained, which displayed extensive variability with respect to morphological and symbiotic characteristics. Cratylia argentea seeds were planted in pots containing 5kg of cerrado soil and maintained in the greenhouse. The treatments consisted of 25 rhizobial isolates, two controls (without nitrogen and without inoculation, with or without nitrogen fertilization (5mgN·plant-1·week-1, and four replications. Plants were cultivated for 150 days after planting seeds to evaluate nodule number, nodule dry weight, shoot and root dry weight, shoot and root N content, and relative and symbiotic efficiency. Thirteen isolates improved shoot dry weight (up to 65.8% and shoot nitrogen concentration (up to 76% compared with those of control treatments. Two isolates, 4 (CR42 and 22 (CR52, conferred higher symbiotic efficiency values of approximately 20%. Therefore, these two rhizobial isolates displayed the highest potential as beneficial inoculants to optimize the symbiotic efficiency for Cratylia and to increase the incorporation of nutrients and biomass into the productive system in the cerrado.

  13. Understanding the Effect of Land Cover Classification on Model Estimates of Regional Carbon Cycling in the Boreal Forest Biome

    Science.gov (United States)

    Kimball, John; Kang, Sinkyu

    2003-01-01

    The original objectives of this proposed 3-year project were to: 1) quantify the respective contributions of land cover and disturbance (i.e., wild fire) to uncertainty associated with regional carbon source/sink estimates produced by a variety of boreal ecosystem models; 2) identify the model processes responsible for differences in simulated carbon source/sink patterns for the boreal forest; 3) validate model outputs using tower and field- based estimates of NEP and NPP; and 4) recommend/prioritize improvements to boreal ecosystem carbon models, which will better constrain regional source/sink estimates for atmospheric C02. These original objectives were subsequently distilled to fit within the constraints of a 1 -year study. This revised study involved a regional model intercomparison over the BOREAS study region involving Biome-BGC, and TEM (A.D. McGuire, UAF) ecosystem models. The major focus of these revised activities involved quantifying the sensitivity of regional model predictions associated with land cover classification uncertainties. We also evaluated the individual and combined effects of historical fire activity, historical atmospheric CO2 concentrations, and climate change on carbon and water flux simulations within the BOREAS study region.

  14. Dinámicas TIC en educación biomédica y odontológica

    Directory of Open Access Journals (Sweden)

    Gleyvis Coro Montanet

    2015-12-01

    Full Text Available Ensayo que aborda un espectro de propuestas de nuevas tecnológicas aplicables en el ámbito de la enseñanza biomédica de mayor implicación operatoria, con especificidad en la rama odontológica. Después de un breve repaso de los elementos que han dificultado la inserción de las TIC en las academias médicas, el trabajo ofrece variedad de estrategias para gestionar el cambio y la mejora a través de la aplicación de tecnologías, con apoyo en evidencias de éxito y dependientes de la estrecha relación de lo tecnológico con un modelo educativo -de simulación preclínica y ejercitación teórico/práctica- dinámico y flexible. Todo refrendado por un proyecto de innovación, con base en la investigación-acción, llevado a cabo en la titulación de Odontología de la Universidad Europea de Madrid, que concluye con el aporte de buenas prácticas y una prospectiva de considerable desarrollo a corto y largo plazo. DOI: 10.18870/hlrc.v5i4.290

  15. Shifts in functional traits elevate risk of fire-driven tree dieback in tropical savanna and forest biomes.

    Science.gov (United States)

    Pellegrini, Adam F A; Franco, Augusto C; Hoffmann, William A

    2016-03-01

    Numerous predictions indicate rising CO2 will accelerate the expansion of forests into savannas. Although encroaching forests can sequester carbon over the short term, increased fires and drought-fire interactions could offset carbon gains, which may be amplified by the shift toward forest plant communities more susceptible to fire-driven dieback. We quantify how bark thickness determines the ability of individual tree species to tolerate fire and subsequently determine the fire sensitivity of ecosystem carbon across 180 plots in savannas and forests throughout the 2.2-million km(2) Cerrado region in Brazil. We find that not accounting for variation in bark thickness across tree species underestimated carbon losses in forests by ~50%, totaling 0.22 PgC across the Cerrado region. The lower bark thicknesses of plant species in forests decreased fire tolerance to such an extent that a third of carbon gains during forest encroachment may be at risk of dieback if burned. These results illustrate that consideration of trait-based differences in fire tolerance is critical for determining the climate-carbon-fire feedback in tropical savanna and forest biomes. © 2015 John Wiley & Sons Ltd.

  16. Shifts in Functional Traits Elevate Risk of Fire-driven Tree Dieback in Tropical Savanna-forest Biomes

    Science.gov (United States)

    Pellegrini, A.; Franco, A. C.; Hoffmann, W. A.

    2015-12-01

    Rising CO2 is predicted to accelerate the expansion of forests into savannas. Although encroaching forests can sequester carbon over the short-term, the carbon pools may become increasingly sensitive to fire due to a shift towards plant communities more susceptible to fire-driven dieback. We quantify how functional traits determine the ability of individual tree species to tolerate fire and subsequently determine the fire-sensitivity of ecosystem carbon across 180 plots throughout the 2.2-million km2 Cerrado region in Brazil. We find that accounting for variation in functional traits fundamentally changes fire-driven dieback predictions: savannas and forests switched from having similar amounts of potential carbon losses to forests containing substantially greater potential carbon losses when differences in functional traits were considered. In fact, we find that not accounting for variation in functional traits underestimated carbon losses in forests by ~50%, summing to an underestimation of 0.22PgC across the Cerrado region. In total, shifts in the fire sensitivity of forests due to changes in community composition and functional traits may offset a third of carbon gains during forest encroachment. These results illustrate that functional traits are critical for determining the climate-carbon-fire feedback in tropical savanna-forest biomes.

  17. The southern Brazilian grassland biome: soil carbon stocks, fluxes of greenhouse gases and some options for mitigation.

    Science.gov (United States)

    Pillar, V D; Tornquist, C G; Bayer, C

    2012-08-01

    The southern Brazilian grassland biome contains highly diverse natural ecosystems that have been used for centuries for grazing livestock and that also provide other important environmental services. Here we outline the main factors controlling ecosystem processes, review and discuss the available data on soil carbon stocks and greenhouse gases emissions from soils, and suggest opportunities for mitigation of climatic change. The research on carbon and greenhouse gases emissions in these ecosystems is recent and the results are still fragmented. The available data indicate that the southern Brazilian natural grassland ecosystems under adequate management contain important stocks of organic carbon in the soil, and therefore their conservation is relevant for the mitigation of climate change. Furthermore, these ecosystems show a great and rapid loss of soil organic carbon when converted to crops based on conventional tillage practices. However, in the already converted areas there is potential to mitigate greenhouse gas emissions by using cropping systems based on no soil tillage and cover-crops, and the effect is mainly related to the potential of these crop systems to accumulate soil organic carbon in the soil at rates that surpass the increased soil nitrous oxide emissions. Further modelling with these results associated with geographic information systems could generate regional estimates of carbon balance.

  18. The rise and fall of the Old World savannah fauna and the origins of the African savannah biome.

    Science.gov (United States)

    Kaya, Ferhat; Bibi, Faysal; Žliobaitė, Indrė; Eronen, Jussi T; Hui, Tang; Fortelius, Mikael

    2018-02-01

    Despite much interest in the ecology and origins of the extensive grassland ecosystems of the modern world, the biogeographic relationships of savannah palaeobiomes of Africa, India and mainland Eurasia have remained unclear. Here we assemble the most recent data from the Neogene mammal fossil record in order to map the biogeographic development of Old World mammalian faunas in relation to palaeoenvironmental conditions. Using genus-level faunal similarity and mean ordinated hypsodonty in combination with palaeoclimate modelling, we show that savannah faunas developed as a spatially and temporally connected entity that we term the Old World savannah palaeobiome. The Old World savannah palaeobiome flourished under the influence of middle and late Miocene global cooling and aridification, which resulted in the spread of open habitats across vast continental areas. This extensive biome fragmented into Eurasian and African branches due to increased aridification in North Africa and Arabia during the late Miocene. Its Eurasian branches had mostly disappeared by the end of the Miocene, but the African branch survived and eventually contributed to the development of Plio-Pleistocene African savannah faunas, including their early hominins. The modern African savannah fauna is thus a continuation of the extensive Old World savannah palaeobiome.

  19. Caracterización de la superaleación ODS MA 956 para aplicaciones biomédicas

    Directory of Open Access Journals (Sweden)

    Escudero, M. I.

    1998-05-01

    Full Text Available Since the MA 956 was proposed as a possible new biomaterial due to its good corrosion resistance values in physiological fluids a long way, still not finished, has been done. An exhaustive characterization of this alloy at room temperature has been developed. The technological objectives are well established: the possible use of this material for biomedical applications as hip or knee prostheses and as dental implants. The study was performed comparing the results of this alloy with the materials used nowadays as surgical implants, i.e., titanium alloys and polyethylene.

    Desde que la MA 956 fue propuesta como posible nuevo biomaterial en base a su buena resistencia a la corrosión frente a sueros fisiológicos, un largo camino, aún sin finalizar, se ha recorrido, en el que se ha llevado a cabo una caracterización exhaustiva de esta aleación a temperatura ambiente con fines tecnológicos bien definidos: su posible uso en aplicaciones biomédicas, bien sea como prótesis de cadera o de rodilla y para implantes dentales. Los estudios se han llevado a cabo comparando esta aleación con los materiales más comúnmente utilizados en implantes ortopédicos como aleaciones de titanio y polietileno.

  20. ¿Cómo cambiar hacia sociedades sostenibles? Reflexiones sobre biomímesis y autolimitación

    Directory of Open Access Journals (Sweden)

    Riechmann, Jorge

    2005-06-01

    Full Text Available We live in socio-economical systems which are too large in relation to the biosphere which contains them, on the one hand, and on the other, we live in badly adapted systems, that is, human systems not well fitted into the natural ecosystems. The scale problem calls for a move toward self-limitation by human societies, which (in terms of political economy could be thought of as global demand management; the structural problem demands a reconstruction of the technosphere according to biomimicry principIes.

    Vivimos dentro de sistemas socioeconámicos humanos demasiado grandes en relación con la biosfera que los contiene, por una parte; y sistemas mal adaptados, sistemas humanos que encajan mal en los ecosistemas naturales. El problema de escala reclama un movimiento de autolimitación por parte de las sociedades humanas, que podríamos concebir (en términos de economía política bajo la idea de gestión global de la demanda; el problema de estructura exige una reconstrucción de la tecnosfera de acuerdo con principios de biomímesis.

  1. The contrasting nature of woody plant species in different neotropical forest biomes reflects differences in ecological stability.

    Science.gov (United States)

    Pennington, R Toby; Lavin, Matt

    2016-04-01

    A fundamental premise of this review is that distinctive phylogenetic and biogeographic patterns in clades endemic to different major biomes illuminate the evolutionary process. In seasonally dry tropical forests (SDTFs), phylogenies are geographically structured and multiple individuals representing single species coalesce. This pattern of monophyletic species, coupled with their old species stem ages, is indicative of maintenance of small effective population sizes over evolutionary timescales, which suggests that SDTF is difficult to immigrate into because of persistent resident lineages adapted to a stable, seasonally dry ecology. By contrast, lack of coalescence in conspecific accessions of abundant and often widespread species is more frequent in rain forests and is likely to reflect large effective population sizes maintained over huge areas by effective seed and pollen flow. Species nonmonophyly, young species stem ages and lack of geographical structure in rain forest phylogenies may reflect more widespread disturbance by drought and landscape evolution causing resident mortality that opens up greater opportunities for immigration and speciation. We recommend full species sampling and inclusion of multiple accessions representing individual species in phylogenies to highlight nonmonophyletic species, which we predict will be frequent in rain forest and savanna, and which represent excellent case studies of incipient speciation. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  2. Application of a rule-based model to estimate mercury exchange for three background biomes in the continental United States

    Science.gov (United States)

    Hartman, J.S.; Weisberg, P.J.; Pillai, R.; Ericksen, J.A.; Kuiken, T.; Lindberg, S.E.; Zhang, H.; Rytuba, J.J.; Gustin, M.S.

    2009-01-01

    Ecosystems that have low mercury (Hg) concentrations (i.e., not enriched or impactedbygeologic or anthropogenic processes) cover most of the terrestrial surface area of the earth yet their role as a net source or sink for atmospheric Hg is uncertain. Here we use empirical data to develop a rule-based model implemented within a geographic information system framework to estimate the spatial and temporal patterns of Hg flux for semiarid deserts, grasslands, and deciduous forests representing 45% of the continental United States. This exercise provides an indication of whether these ecosystems are a net source or sink for atmospheric Hg as well as a basis for recommendation of data to collect in future field sampling campaigns. Results indicated that soil alone was a small net source of atmospheric Hg and that emitted Hg could be accounted for based on Hg input by wet deposition. When foliar assimilation and wet deposition are added to the area estimate of soil Hg flux these biomes are a sink for atmospheric Hg. ?? 2009 American Chemical Society.

  3. The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report.

    Science.gov (United States)

    2016-06-03

    The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium is a novel, interdisciplinary initiative comprised of experts across many fields, including genomics, data analysis, engineering, public health, and architecture. The ultimate goal of the MetaSUB Consortium is to improve city utilization and planning through the detection, measurement, and design of metagenomics within urban environments. Although continual measures occur for temperature, air pressure, weather, and human activity, including longitudinal, cross-kingdom ecosystem dynamics can alter and improve the design of cities. The MetaSUB Consortium is aiding these efforts by developing and testing metagenomic methods and standards, including optimized methods for sample collection, DNA/RNA isolation, taxa characterization, and data visualization. The data produced by the consortium can aid city planners, public health officials, and architectural designers. In addition, the study will continue to lead to the discovery of new species, global maps of antimicrobial resistance (AMR) markers, and novel biosynthetic gene clusters (BGCs). Finally, we note that engineered metagenomic ecosystems can help enable more responsive, safer, and quantified cities.

  4. Governing and Delivering a Biome-Wide Restoration Initiative: The Case of Atlantic Forest Restoration Pact in Brazil

    Directory of Open Access Journals (Sweden)

    Severino R. Pinto

    2014-09-01

    Full Text Available In many human-modified tropical landscapes, biodiversity conservation and the provision of ecosystem services require large-scale restoration initiatives. Such initiatives must be able to augment the amount and the quality of remaining natural habitats. There is thus a growing need for long-term, multi-stakeholder and multi-purpose initiatives that result in multiple ecological and socioeconomic benefits at the biome scale. The Atlantic Forest Restoration Pact (AFRP is a coalition of 260+ stakeholders, including governmental agencies, private sector, NGOs and research institutions, aimed at restoring 15 million ha of degraded and deforested lands by 2050. By articulating, and then integrating common interests, this initiative has allowed different sectors of society to implement an ambitious vision and create a forum for public and private concerns regarding forest restoration. The AFRP adopts a set of governance tools so multiple actors can implement key processes to achieve long-term and visionary restoration goals. Having overcome some initial challenges, AFRP now has to incorporate underrepresented stakeholders and enhance its efforts to make forest restoration more economically viable, including cases where restoration could be less expensive and profitable. The AFRP experience has resulted in many lessons learned, which can be shared to foster similar initiatives across tropical regions.

  5. A survey of tick-borne pathogens in dogs and their ticks in the Pantanal biome, Brazil.

    Science.gov (United States)

    Melo, A L T; Witter, R; Martins, T F; Pacheco, T A; Alves, A S; Chitarra, C S; Dutra, V; Nakazato, L; Pacheco, R C; Labruna, M B; Aguiar, D M

    2016-03-01

    Tick and blood samples collected from domestic dogs in the Brazilian Pantanal were tested by molecular methods for the presence of tick-borne protozoa and bacteria. Among 320 sampled dogs, 3.13% were infected by Babesia vogeli (Piroplasmida: Babesiidae), 8.75% by Hepatozoon canis (Eucoccidiorida: Hepatozoidae), 7.19% by Anaplasma platys (Rickettsiales: Anaplasmataceae), and 0.94% by an unclassified Anaplasma sp. In three tick species collected from dogs, the following tick-borne agents were detected: (a) B. vogeli, An. platys and Ehrlichia canis (Rickettsiales: Anaplasmataceae), infecting Rhipicephalus sanguineus sensu lato (Ixodida: Ixodidae) ticks; (b) H. canis, an unclassified Anaplasma sp. and Rickettsia amblyommii (Rickettsiales: Rickettsiaceae), infecting Amblyomma cajennense sensu lato (Ixodida: Ixodidae) ticks, and (c) Rickettsia sp. strain Atlantic rainforest, an emerging human pathogen, infecting Amblyomma ovale ticks. Molecular analysis, based on a mitochondrial gene, revealed that the Am. cajennense s.l. ticks of the present study corresponded to Amblyomma sculptum, a member of the Am. cajennense species complex, and that Rh. sanguineus s.l. belonged to the tropical lineage. Whereas dogs are exposed to a number of tick-borne bacterial and protozoan agents in the Pantanal biome, humans are potentially exposed to infection by spotted fever group rickettsiae (e.g. R. amblyommii and Rickettsia sp. strain Atlantic rainforest) because both Am. sculptum and Am. ovale are among the most important human-biting ticks in Brazil. © 2015 The Royal Entomological Society.

  6. De la ingeniería Biomédica al aula de Matemáticas

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    Avenilde Romo-Vázquez

    2012-11-01

    Full Text Available Con el objetivo de diseñar actividades didácticas de modelación lo más cercanas a un contexto “real”, se realizó un trabajo colaborativo entre matemáticos educativos e ingenieros biomédicos. Este trabajo permitió conocer y analizar un contexto real de modelación matemática, el método de Separación Ciega de Fuentes (Blind Source Separation - BSS. La descripción del método de la BSS, que presentamos en la primera parte de esta comunicación, fue mostrada a profesores de matemáticas que cursaban la maestría en Matemática Educativa del CICATA-IPN y se les pidió generar actividades didácticas inspiradas en este contexto. En la segunda parte de esta comunicación, presentamos algunas de las actividades que ellos generaron y consideramos que son una buena base para el diseño de secuencias didácticas que puedan figurar en la formación matemática de futuros ingenieros.

  7. NDVI-Based Vegetation Change in Inner Mongolia from 1982 to 2006 and Its Relationship to Climate at the Biome Scale

    OpenAIRE

    Guo, Linghui; Wu, Shaohong; Zhao, Dongsheng; Yin, Yunhe; Leng, Guoyong; Zhang, Qingyu

    2014-01-01

    Based on the normalized difference vegetation index (NDVI), we analyzed vegetation change of the six major biomes across Inner Mongolia at the growing season and the monthly timescales and estimated their responses to climate change between 1982 and 2006. To reduce disturbance associated with land use change, those pixels affected by land use change from the 1980s to 2000s were excluded. At the growing season scale, the NDVI increased weakly in the natural ecosystems, but strongly in cropland...

  8. Global trends in biome-level plant water-use efficiency in the past 25 years from rising atmospheric carbon dioxide concentration

    Science.gov (United States)

    Kuang Soh, Wuu; Yiotis, Charilaos; Murray, Michelle; Batke, Sven; McElwain, Jennifer

    2017-04-01

    Climate change will likely alter future ecosystems functioning however the magnitude and direction of such changes are unpredictable and difficult to quantify. One notable aspect of ecosystem functioning is the carbon and hydrologic cycles which are closely tied by gas exchange via plant stomata. Uncertainties in the magnitude and direction of the physiological responses of plants to elevated CO2 at biome level hamper modelling of terrestrial water cycling and carbon storage. One of the important physiological traits is water-use efficiency which is the ratio of water loss to carbon gain. This is a key characteristic of ecosystem function that is central to the global cycles of water, energy and carbon. Many existing studies have focused on long-term centennial effects of elevated CO2 on plant water-use efficiency of a relatively few species within narrow ecosystem range but short-term effect on much broader ecosystem coverage is unknown. Here we assessed the impact of a short-term (25 years: between 1988/89 and 2013/15) increase in CO2 (c. 40 ppm) on plant intrinsic water-use efficiency inferred from leaf stable carbon isotope (δ13C), encompassing a broader coverage to include seven world biome and 229 woody angiosperm species. To substantiate the result from the leaf stable carbon isotope data, we also conducted gas-exchange analyses experiments. We show that the magnitude of plant intrinsic water-use efficiency change varied among biomes and plant functional types. Our finding is important because it shows that short-term increase in atmospheric CO2 can potentially alter hydrologic cycle and its magnitude may differ among biome-plant functional type compositions.

  9. Systematics and evolution of the Australian knob-tail geckos (Nephrurus, Carphodactylidae, Gekkota): plesiomorphic grades and biome shifts through the Miocene.

    Science.gov (United States)

    Oliver, Paul M; Bauer, Aaron M

    2011-06-01

    Clades that predate the origin of biomes that they inhabit provide unique opportunities to examine both when major environmental transitions occurred, and how lineages adapted to these changes. The isolated island continent Australia has undergone a profound environmental transition through the Miocene, from relatively mesic to predominantly arid; however, we have much to learn about both the timing of this change, and how organisms may have responded to it. The family Carphodactylidae is an ancient Gondwanan group of geckos that occurs across all major Australian biomes. A multilocus (ND2, Rag-1, c-mos) phylogenetic and dating analysis of the most ecologically diverse clade within this group, the genus Nephrurus (sensuBauer, 1990) reveals that two of three morphological taxa historically recognized (the 'spiny knob-tails' and 'Underwoodisaurus') are relatively species depauperate, pleisomorphic basal grades that diversified through the late Oligocene and early Miocene, and are now absent from most of the arid biome. Based on their deep divergence and morphological distinctiveness we recognize two lineages (milii and sphyrurus) as monotypic genera, the later of which is named herein (Uvidicolus nov. gen). In contrast, a third morphological group, the 'smooth knob-tails,' is a monophyletic group of five exclusively arid zone burrowing species that has radiated relatively recently (mid-Miocene). Our phylogeny indicates that successful colonization of this novel and challenging biome by Nephrurus correlates with an initial shift to terrestriality and adaptation to at least seasonally arid conditions around the early Miocene, and the eventual evolution and subsequent mid-Miocene radiation of a lineage specialized for burrowing. Copyright © 2011 Elsevier Inc. All rights reserved.

  10. NDVI-Based Vegetation Change in Inner Mongolia from 1982 to 2006 and Its Relationship to Climate at the Biome Scale

    Directory of Open Access Journals (Sweden)

    Linghui Guo

    2014-01-01

    Full Text Available Based on the normalized difference vegetation index (NDVI, we analyzed vegetation change of the six major biomes across Inner Mongolia at the growing season and the monthly timescales and estimated their responses to climate change between 1982 and 2006. To reduce disturbance associated with land use change, those pixels affected by land use change from the 1980s to 2000s were excluded. At the growing season scale, the NDVI increased weakly in the natural ecosystems, but strongly in cropland. Interannual variations in the growing season NDVI for forest was positively linked with potential evapotranspiration and temperature, but negatively correlated with precipitation. In contrast, it was positively correlated with precipitation, but negatively related to potential evapotranspiration for other natural biomes, particularly for desert steppe. Although monthly NDVI trends were characterized as heterogeneous, corresponding to monthly variations in climate change among biome types, warming-related NDVI at the beginning of the growing season was the main contributor to the NDVI increase during the growing season for forest, meadow steppe, and typical steppe, but it constrained the NDVI increase for desert steppe, desert, and crop. Significant one-month lagged correlations between monthly NDVI and climate variables were found, but the correlation characteristics varied greatly depending on vegetation type.

  11. [Application of Combined Detection of Fusion Gene and BIOMED-2 Standardized Ig Gene Rearrangement System in Childhood B-cell Acute Lymphoblastic Leukemia].

    Science.gov (United States)

    Ai, Xiao-Fei; Zhang, Yan; Shi, Xin-Rong; Zheng, Ying-Chun; Zhang, Li; Wang, Xiao-Jing; Li, Qing-Hua

    2016-04-01

    To explore the application of combined detection of fusion gene and BIOMED-2 standardized immunoglobulin (Ig) gene rearrangement system in diagnosis and treatment of children with acute lymphoblastic leukemia (ALL). Multiplex-PCR amplifications and RQ-PCR of RNA/DNA were performed using ALL fusion gene detection kit and BIOMED-2 primer. The Ig gene rearrangements were analyzed by using PCR fragment analysis system. Out of 251 children with B-ALL, 77 cases were TEL-AML1(+) , 28 cases were E2A-PBX1(+) , 10 cases were MLL-AF4(+) , 11 cases were BCR-ABL(+) , the total positive rate was 50.2%, 82.5% showed IgH VH-JH rearrangement, 53.4% showed IgK rearrangement. The positive rate of combined detection of fusion gene and gene rearrangement was 99%. E2A-PBX1(+) and MLL-AF4(+) with IgK(+) gene rearrangement group was compared with negative control group, the difference was statistically significant (P < 0.001 or P = 0.005); 105 ALL fusion gene positive cases had been detected by fluorescence in situ hybridization (FISH) simultaneously, the accordance rate of fusion gene and FISH was more than 94%. The combined detection of ALL fusion gene and BIOMED-2 standardized clonality analysis system can improve the positive detected rate of B-ALL dramatically, and make the grouping of disease prognosis more accurately; this combined detection is a more faster and sensitive method than FISH.

  12. Estimating carbon flux phenology with satellite-derived land surface phenology and climate drivers for different biomes: a synthesis of AmeriFlux observations.

    Science.gov (United States)

    Zhu, Wenquan; Chen, Guangsheng; Jiang, Nan; Liu, Jianhong; Mou, Minjie

    2013-01-01

    Carbon Flux Phenology (CFP) can affect the interannual variation in Net Ecosystem Exchange (NEE) of carbon between terrestrial ecosystems and the atmosphere. In this study, we proposed a methodology to estimate CFP metrics with satellite-derived Land Surface Phenology (LSP) metrics and climate drivers for 4 biomes (i.e., deciduous broadleaf forest, evergreen needleleaf forest, grasslands and croplands), using 159 site-years of NEE and climate data from 32 AmeriFlux sites and MODIS vegetation index time-series data. LSP metrics combined with optimal climate drivers can explain the variability in Start of Carbon Uptake (SCU) by more than 70% and End of Carbon Uptake (ECU) by more than 60%. The Root Mean Square Error (RMSE) of the estimations was within 8.5 days for both SCU and ECU. The estimation performance for this methodology was primarily dependent on the optimal combination of the LSP retrieval methods, the explanatory climate drivers, the biome types, and the specific CFP metric. This methodology has a potential for allowing extrapolation of CFP metrics for biomes with a distinct and detectable seasonal cycle over large areas, based on synoptic multi-temporal optical satellite data and climate data.

  13. First Record of Anopheles oryzalimnetes, Anopheles argyritarsis, and Anopheles sawyeri (Diptera: Culicidae) in the Caatinga Biome, Semiarid Scrubland of Sergipe State, Brazil.

    Science.gov (United States)

    Marteis, L S; Sallum, M A M; Natal, D; Oliveira, T M P; Gama, R A; Dolabella, S S; Santos, R L C

    2015-09-01

    Caatinga is one of the least known biomes of Brazil in relation to biodiversity. The dry condition of semiarid areas has been associated in the past with low richness of fauna and flora, not encouraging studies in this region. There is a lack of mosquito records including anophelines. Thus, to investigate the biodiversity of Anopheles mosquitoes in the Caatinga biome, we collected immature mosquitoes in aquatic habitats in a conservation reserve located in the northwestern portion of Sergipe state. The captured specimens were initially identified as Anopheles albitarsis l.s. and Anopheles argyritarsis l.s. To confirm the morphological identification, sequences were generated by cytochrome oxidase subunit I mitocondrial gene. The results showed that the specimens belong to the species Anopheles oryzalimnetes, An. argyritarsis, and Anopheles sawyeri. These are the first records of these species in this region. The presence of Anopheles in the Caatinga biome, which is characterized by arid and semiarid climatic conditions, encourages the interest in the study of biological, physiological, and behavioral adaptations, selected over time, which allow these mosquito populations to survive through the long periods of drought that is characteristic of this region. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  14. First parasitological, histopathological and molecular characterization of Echinococcus vogeli Rausch and Bernstein, 1972 from Cuniculus paca Linnaeus, 1766 in the Cerrado biome (Mato Grosso do Sul, Brazil).

    Science.gov (United States)

    Bittencourt-Oliveira, Fernanda; Teixeira, Paulo; Alencar, Alba; Menezes, Rodrigo; Corrêa, Christiane; Neves, Leandro; Almeida, Fernanda; Daipert-Garcia, Daniel; Machado-Silva, José Roberto; Rodrigues-Silva, Rosângela

    2018-01-30

    Polycystic echinococcosis (PE) is caused by Echinococcus vogeli metacestodes (larval stage) in Neotropical countries. E. vogeli is trophically-transmitted between predators bush dogs (Speothos venaticus) and prey pacas (Cuniculus paca). In Brazil, reported PE cases are restricted to the Amazon biome. In this study, metacestodes from a paca hunted in Mato Grosso do Sul state (Cerrado biome) were identified morphological and histopathological techniques and further confirmed by molecular testing (sequencing of cytochrome C oxidase subunit I (cox1) gene) for the first time. Images of the whole liver showed superficial bubble-like hepatic masses. The parasitological analysis revealed large hooks (41.3 ± 1.2 μm length/12.8 ± 0.8 μm width) and small hooks (33.0 ± 1.5 μm length/11.1 ± 1.2 μm width), consistent with E. vogeli. Microscopically, the liver showed protoscoleces, a thick laminated layer, fibrosis, and inflammatory infiltrate in the adventitial layer. The DNA sequencing confirmed E. vogeli with 99% homology with sequences deposited in the GenBank. In addition, this finding greatly extends the geographic range of animal polycystic echinococcosis into the Cerrado. It is likely to occur in new biomes, where bush dogs and pacas share a given area in a trophic relationship. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Estimating carbon flux phenology with satellite-derived land surface phenology and climate drivers for different biomes: a synthesis of AmeriFlux observations.

    Directory of Open Access Journals (Sweden)

    Wenquan Zhu

    Full Text Available Carbon Flux Phenology (CFP can affect the interannual variation in Net Ecosystem Exchange (NEE of carbon between terrestrial ecosystems and the atmosphere. In this study, we proposed a methodology to estimate CFP metrics with satellite-derived Land Surface Phenology (LSP metrics and climate drivers for 4 biomes (i.e., deciduous broadleaf forest, evergreen needleleaf forest, grasslands and croplands, using 159 site-years of NEE and climate data from 32 AmeriFlux sites and MODIS vegetation index time-series data. LSP metrics combined with optimal climate drivers can explain the variability in Start of Carbon Uptake (SCU by more than 70% and End of Carbon Uptake (ECU by more than 60%. The Root Mean Square Error (RMSE of the estimations was within 8.5 days for both SCU and ECU. The estimation performance for this methodology was primarily dependent on the optimal combination of the LSP retrieval methods, the explanatory climate drivers, the biome types, and the specific CFP metric. This methodology has a potential for allowing extrapolation of CFP metrics for biomes with a distinct and detectable seasonal cycle over large areas, based on synoptic multi-temporal optical satellite data and climate data.

  16. The past is a guide to the future? Comparing Middle Pliocene vegetation with predicted biome distributions for the twenty-first century.

    Science.gov (United States)

    Salzmann, U; Haywood, A M; Lunt, D J

    2009-01-13

    During the Middle Pliocene, the Earth experienced greater global warmth compared with today, coupled with higher atmospheric CO2 concentrations. To determine the extent to which the Middle Pliocene can be used as a 'test bed' for future warming, we compare data and model-based Middle Pliocene vegetation with simulated global biome distributions for the mid- and late twenty-first century. The best agreement is found when a Middle Pliocene biome reconstruction is compared with a future scenario using 560 ppmv atmospheric CO2. In accordance with palaeobotanical data, all model simulations indicate a generally warmer and wetter climate, resulting in a northward shift of the taiga-tundra boundary and a spread of tropical savannah and woodland in Africa and Australia at the expense of deserts. Our data-model comparison reveals differences in the distribution of polar vegetation, which indicate that the high latitudes during the Middle Pliocene were still warmer than its predicted modern analogue by several degrees. However, our future scenarios do not consider multipliers associated with 'long-term' climate sensitivity. Changes in global temperature, and thus biome distributions, at higher atmospheric CO2 levels will not have reached an equilibrium state (as is the case for the Middle Pliocene) by the end of this century.

  17. Differentiating moss from higher plants is critical in studying the carbon cycle of the boreal biome

    Science.gov (United States)

    Yuan, Wenping; Liu, Shuguang; Dong, Wenjie; Liang, Shunlin; Zhao, Shuqing; Chen, Jingming; Xu, Wenfang; Li, Xianglan; Barr, Alan; Black, T. Andrew; Yan, Wende; Goulden, Michael; Kulmala, Liisa; Lindroth, Anders; Margolis, Hank A.; Matsuura, Yojiro; Moors, Eddy; van der Molen, Michiel; Ohta, Takeshi; Pilegaard, Kim; Varlagin, Andrej; Vesala, Timo

    2014-01-01

    The satellite-derived normalized difference vegetation index (NDVI), which is used for estimating gross primary production (GPP), often includes contributions from both mosses and vascular plants in boreal ecosystems. For the same NDVI, moss can generate only about one-third of the GPP that vascular plants can because of its much lower photosynthetic capacity. Here, based on eddy covariance measurements, we show that the difference in photosynthetic capacity between these two plant functional types has never been explicitly included when estimating regional GPP in the boreal region, resulting in a substantial overestimation. The magnitude of this overestimation could have important implications regarding a change from a current carbon sink to a carbon source in the boreal region. Moss abundance, associated with ecosystem disturbances, needs to be mapped and incorporated into GPP estimates in order to adequately assess the role of the boreal region in the global carbon cycle.

  18. Differentiating moss from higher plants is critical in studying the carbon cycle of the boreal biome.

    Science.gov (United States)

    Yuan, Wenping; Liu, Shuguang; Dong, Wenjie; Liang, Shunlin; Zhao, Shuqing; Chen, Jingming; Xu, Wenfang; Li, Xianglan; Barr, Alan; Andrew Black, T; Yan, Wende; Goulden, Mike L; Kulmala, Liisa; Lindroth, Anders; Margolis, Hank A; Matsuura, Yojiro; Moors, Eddy; van der Molen, Michiel; Ohta, Takeshi; Pilegaard, Kim; Varlagin, Andrej; Vesala, Timo

    2014-06-26

    The satellite-derived normalized difference vegetation index (NDVI), which is used for estimating gross primary production (GPP), often includes contributions from both mosses and vascular plants in boreal ecosystems. For the same NDVI, moss can generate only about one-third of the GPP that vascular plants can because of its much lower photosynthetic capacity. Here, based on eddy covariance measurements, we show that the difference in photosynthetic capacity between these two plant functional types has never been explicitly included when estimating regional GPP in the boreal region, resulting in a substantial overestimation. The magnitude of this overestimation could have important implications regarding a change from a current carbon sink to a carbon source in the boreal region. Moss abundance, associated with ecosystem disturbances, needs to be mapped and incorporated into GPP estimates in order to adequately assess the role of the boreal region in the global carbon cycle.

  19. Tracking vegetation phenology across diverse North American biomes using PhenoCam imagery

    Science.gov (United States)

    Richardson, Andrew D.; Hufkens, Koen; Milliman, Tom; Aubrecht, Donald M.; Chen, Min; Gray, Josh M.; Johnston, Miriam R.; Keenan, Trevor F.; Klosterman, Stephen T.; Kosmala, Margaret; Melaas, Eli K.; Friedl, Mark A.; Frolking, Steve

    2018-03-01

    Vegetation phenology controls the seasonality of many ecosystem processes, as well as numerous biosphere-atmosphere feedbacks. Phenology is also highly sensitive to climate change and variability. Here we present a series of datasets, together consisting of almost 750 years of observations, characterizing vegetation phenology in diverse ecosystems across North America. Our data are derived from conventional, visible-wavelength, automated digital camera imagery collected through the PhenoCam network. For each archived image, we extracted RGB (red, green, blue) colour channel information, with means and other statistics calculated across a region-of-interest (ROI) delineating a specific vegetation type. From the high-frequency (typically, 30 min) imagery, we derived time series characterizing vegetation colour, including “canopy greenness”, processed to 1- and 3-day intervals. For ecosystems with one or more annual cycles of vegetation activity, we provide estimates, with uncertainties, for the start of the “greenness rising” and end of the “greenness falling” stages. The database can be used for phenological model validation and development, evaluation of satellite remote sensing data products, benchmarking earth system models, and studies of climate change impacts on terrestrial ecosystems.

  20. EFFECTIVE PRECIPTATION, SOIL LOSS AND PLANT COVER SYSTEMS IN THE CAATINGA BIOME, BRAZIL

    Directory of Open Access Journals (Sweden)

    HELBA ARAÚJO DE QUEIROZ PALÁCIO

    2016-01-01

    Full Text Available The objective of this work was to evaluate the influence of anthropic activities on the effective precipitation (eP and soil loss in watersheds under different land uses in a tropical dry forest region. The experimental area was located in the central part of the State of Ceará, Brazil. The land uses evaluated were: fallow Caatinga (FC, thinned Caatinga (TC and deforested Caatinga followed by a burning procedure and pasture cultivation (DBP. The areas were monitored in the rainy season (January to May, 2010, when 57 natural rainfalls occurred, totaling 941 mm of precipitation. The eP and sediment productions were quantified by the sum of all occurrences during the study period, and the soil loss was represented by suspended and dragged sediments. The eP was 15.13 mm and sediment produced was 167.81 kg ha - 1 in FC conditions. The eP values was smaller (11.28 mm in the watershed with TC, which had soil loss sum of 42.04 kg ha - 1 . The largest annual eP was found in the DBP area, with 112.88 mm yr - 1 of accumulated water depth, which also showed the greater annual soil loss (3114.97 kg ha - 1 . The greatest interference of plant cover in the two variables evaluated occurred in the first precipitation events, when the plants were not yet fully developed.

  1. - and Cross-Polarization 13C NMR Evidence of Alterations in Molecular Composition of Humic Substances Following Afforestation with Eucalypt in Distinct Brazilian Biomes

    Science.gov (United States)

    Silva, I. R.; Soares, E. M.; Schmidt-Rohr, K.; Novais, R.; Barros, N.; Fernandes, S.

    2010-12-01

    The effect of planting fast growing tree species on SOM quality in tropical regions has been overlooked. In the present study 13C-NMR approaches were used to evaluate the impact of eucalypt cultivation on humic and fulvic acids molecular composition. The results indicate that the replacement of native vegetation by eucalypt plantations increased the relative contribution of aliphatic groups in HA from soils previously under Atlantic Forest, Grassland, and the Cerrado (Curvelo site only). The same trend was observed for FA, except in the Curvelo site. A trend for degradation and smaller contribution of O-alkyl C (carbohydrates) in HA was observed in soils under eucalyptus in Atlantic Forest and Cerrado. For FA such decreases were seen in Cerrado and Grassland biomes after eucalypt planting. In the area cultivated with pasture in the Atlantic Forest biome and in the Grassland soil, the largest contributions of lignin-derived compounds were detected in HA. The HA from the Cerrado at the Curvelo site, where the woody vegetation is virtually devoid of grassy species, showed the lowest intensity of lignin signal then those from the Cerrado sensu stricto in Itacambira, where grass species are more abundant. At our study sites, charred material are most likely derived from burning of the native vegetation, as naturally occurs in the Cerrado region, or anthropogenic fires in the Grassland biome. Burning of harvest residues in eucalypt fields was also a common practice in the early rotations. The replacement of native vegetation by eucalypt plantations increases the relative contribution of nonpolar alkyl groups in HA from soils previously under Atlantic Forest, Grassland, and the Cerrado (Curvelo site only) biomes. There is evidence of substantial contribution of lignin-derived C to HA and FA, especially in sites planted with Brachiaria sp pastures. Eucalypt introduction decreases the relative contribution of carbohydrates in HA and FA. 13C DP/MAS NMR functional groups in

  2. Concurrent CO2 and COS fluxes across major biomes in Europe

    Science.gov (United States)

    Spielmann, Felix M.; Kitz, Florian; Hammerle, Albin; Gerdel, Katharina; Ibrom, Andreas; Kolle, Olaf; Migliavacca, Mirco; Moreno, Gerardo; Noe, Steffen M.; Wohlfahrt, Georg

    2017-04-01

    The trace gas carbonyl sulfide (COS) has been proposed as a tracer for canopy gross primary production (GPP), canopy transpiration and stomatal conductance of plant canopies in the last few years. COS enters the plant leaf through the stomata and diffuses through the intercellular space, the cell wall, the plasma membrane and the cytosol like carbon dioxide (CO2). It is then catalyzed by the enzyme carbonic anhydrase in a one-way reaction to hydrogen sulfide and CO2. This one-way flux into the leaf makes COS a promising tracer for the GPP. However, this approach assumes that the ratio of the deposition velocities between COS and CO2 is constant, which must be determined in field experiments covering a wide variety of ecosystems. The overarching objective of this study was to quantify the relationship between the ecosystem-scale exchange of COS and CO2 and thus, to test for the potential of COS to be used as a universal tracer for the plant canopy CO2 exchange. Between spring 2015 and summer 2016 we set up our quantum cascade laser at different field sites across Europe. These sites included a managed temperate mountain grassland (AUT), a savanna (ESP), a temperate beech forest (DEN) and a hemiboreal forest (EST). On each of these sites, we conducted ecosystem scale eddy covariance and soil chamber measurements. Since the soil COS flux contribution, especially in grass dominated ecosystems, could not be neglected, we had to derive the actual canopy COS fluxes for all the measurement sites. Using these fluxes we compared the ecosystem relative uptake (ERU) of the sites and searched for factors affecting its variability. We then used the influential factors to scale the ERU to be comparable under different field sites and conditions. Furthermore we also calculated the GPP using conventional CO2 flux partitioning and compared the results with the approach of using the leaf relative uptake.

  3. Specificity of plant-microbe interactions in the tree mycorrhizosphere biome and consequences for soil C cycling

    Science.gov (United States)

    Churchland, Carolyn; Grayston, Sue J.

    2014-01-01

    Mycorrhizal associations are ubiquitous and form a substantial component of the microbial biomass in forest ecosystems and fluxes of C to these belowground organisms account for a substantial portion of carbon assimilated by forest vegetation. Climate change has been predicted to alter belowground plant-allocated C which may cause compositional shifts in soil microbial communities, and it has been hypothesized that this community change will influence C mitigation in forest ecosystems. Some 10,000 species of ectomycorrhizal fungi are currently recognized, some of which are host specific and will only associate with a single tree species, for example, Suillus grevillei with larch. Mycorrhizae are a strong sink for plant C, differences in mycorrhizal anatomy, particularly the presence and extent of emanating hyphae, can affect the amount of plant C allocated to these assemblages. Mycorrhizal morphology affects not only spatial distribution of C in forests, but also differences in the longevity of these diverse structures may have important consequences for C sequestration in soil. Mycorrhizal growth form has been used to group fungi into distinctive functional groups that vary qualitatively and spatially in their foraging and nutrient acquiring potential. Through new genomic techniques we are beginning to understand the mechanisms involved in the specificity and selection of ectomycorrhizal associations though much less is known about arbuscular mycorrhizal associations. In this review we examine evidence for tree species- mycorrhizal specificity, and the mechanisms involved (e.g., signal compounds). We also explore what is known about the effects of these associations and interactions with other soil organisms on the quality and quantity of C flow into the mycorrhizosphere (the area under the influence of mycorrhizal root tips), including spatial and seasonal variations. The enormity of the mycorrhizosphere biome in forests and its potential to sequester substantial

  4. Anthropization on the Cerrado biome in the Brazilian Uruçuí-Una Ecological Station estimated from orbital images.

    Science.gov (United States)

    Pereira, A C; Gama, V F

    2010-11-01

    In this study we analysed the dynamics of deforestation and burnings during the dry seasons from 2003 to 2008 in the Uruçuí-Una Ecological Station (UUES) and its buffer zone, located in the Cerrado biome of the southwest of Piauí, a Brazil's State, based on images from the orbital sensors CCD/CBERS-2 and TM/Landsat-5. Two dates from each of the years were interpreted and analysed: one in the middle of the dry season and one at the end. The deforested areas were expanded through the period analysed and were larger in the buffer zone, suggesting a relative protection of the UUES. New cut-offs were predictable because of the early opening of roads that would become their limits. The burning scars were larger at the end of the dry season as a consequence of the management and implementation of agricultures and pastures. In 2004 and 2007 these scars were larger probably because of the increase of dry phytomass that every three years is big enough to spread the fire originated in the anthropogenic burnings through the native vegetation. This scenario reaffirms the need for: stronger enforcement in order to stop anthropisation in the UUES and a management plan, absent for this unit so far. These proceedings are urgent also because the UUES is located in one of the most preserved regions of the Cerrado and controversially where intense anthropisation in ongoing, which stresses the lack, need and urgency of biological conservation proceedings for the Piauí's southeastern Cerrado.

  5. Leishmanicidal and cholinesterase inhibiting activities of phenolic compounds of Dimorphandra gardneriana and Platymiscium floribundum, native plants from Caatinga biome

    Directory of Open Access Journals (Sweden)

    Nadja S. Vila-Nova

    2012-11-01

    Full Text Available In recent years, the Brazilian Health Ministry and the World Health Organization have supported research into new technologies that may contribute to the surveillance, new treatments, and control of visceral leishmaniasis within the country. In light of this, the aim of this study was to isolate compounds from plants of the Caatinga biome, and to investigate their toxicity against promastigote and amastigote forms of Leishmania infantum chagasi, the main responsible parasite for South American visceral leishmaniasis, and evaluate their ability to inhibit acetylcholinesterase enzyme (AChE. A screen assay using luciferase-expressing promastigote form and an in situ ELISA assay were used to measure the viability of promastigote and amastigote forms, respectively, after exposure to these substances. The MTT colorimetric assay was performed to determine the toxicity of these compounds in murine monocytic RAW 264.7 cell line. All compounds were tested in vitro for their anti-cholinesterase properties. A coumarin, scoparone, was isolated from Platymiscium floribundum stems, and the flavonoids rutin and quercetin were isolated from Dimorphandra gardneriana beans. These compounds were purified using silica gel column chromatography, eluted with organic solvents in mixtures of increasing polarity, and identified by spectral analysis. In the leishmanicidal assays, the compounds showed dose-dependent efficacy against the extracellular promastigote forms, with an EC50 for scoporone of 21.4µg/mL, quercetin and rutin 26 and 30.3µg/mL, respectively. The flavonoids presented comparable results to the positive control drug, amphotericin B, against the amastigote forms with EC50 for quercetin and rutin of 10.6 and 43.3µg/mL, respectively. All compounds inhibited AChE with inhibition zones varying from 0.8 to 0.6, indicating a possible mechanism of action for leishmacicidal activity.

  6. Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome.

    Science.gov (United States)

    Andrade, Ana Camila; Fróes, Adriana; Lopes, Fabyano Álvares Cardoso; Thompson, Fabiano L; Krüger, Ricardo Henrique; Dinsdale, Elizabeth; Bruce, Thiago

    2017-07-01

    Semi-arid and arid areas occupy about 33% of terrestrial ecosystems. However, little information is available about microbial diversity in the semi-arid Caatinga, which represents a unique biome that extends to about 11% of the Brazilian territory and is home to extraordinary diversity and high endemism level of species. In this study, we characterized the diversity of microbial genes associated with biomass conversion (carbohydrate-active enzymes, or so-called CAZYmes) in soil and freshwater of the Caatinga. Our results showed distinct CAZYme profiles in the soil and freshwater samples. Glycoside hydrolases and glycosyltransferases were the most abundant CAZYme families, with glycoside hydrolases more dominant in soil (∼44%) and glycosyltransferases more abundant in freshwater (∼50%). The abundances of individual glycoside hydrolase, glycosyltransferase, and carbohydrate-binding module subfamilies varied widely between soil and water samples. A predominance of glycoside hydrolases was observed in soil, and a higher contribution of enzymes involved in carbohydrate biosynthesis was observed in freshwater. The main taxa associated with the CAZYme sequences were Planctomycetia (relative abundance in soil, 29%) and Alphaproteobacteria (relative abundance in freshwater, 27%). Approximately 5-7% of CAZYme sequences showed low similarity with sequences deposited in non-redundant databases, suggesting putative homologues. Our findings represent a first attempt to describe specific microbial CAZYme profiles for environmental samples. Characterizing these enzyme groups associated with the conversion of carbohydrates in nature will improve our understanding of the significant roles of enzymes in the carbon cycle. We identified a CAZYme signature that can be used to discriminate between soil and freshwater samples, and this signature may be related to the microbial species adapted to the habitat. The data show the potential ecological roles of the CAZYme repertoire and

  7. Health assessment of wild lowland tapir (Tapirus terrestris) populations in the Atlantic Forest and Pantanal biomes, Brazil (1996-2012).

    Science.gov (United States)

    Medici, Emília Patrícia; Mangini, Paulo Rogerio; Fernandes-Santos, Renata Carolina

    2014-10-01

    Abstract The lowland tapir (Tapirus terrestris) is found in South America and is listed as Vulnerable to Extinction by the International Union for Conservation of Nature, Red List of Threatened Species. Health issues, particularly infectious diseases, are potential threats for the species. Health information from 65 wild tapirs from two Brazilian biomes, Atlantic Forest (AF) and Pantanal (PA), were collected during a long-term study (1996-2012). The study included physic, hematologic and biochemical evaluations, microbiologic cultures, urinalysis, and serologic analyses for antibodies against 13 infectious agents (viral and bacterial). The AF and PA tapirs were significantly different for several hematologic and biochemical parameters. Ten bacteria taxa were identified in the AF and 26 in the PA. Antibodies against five viruses were detected: Bluetongue virus, eastern equine encephalitis virus, western equine encephalitis virus, infectious bovine rhinotracheitis virus, and porcine parvovirus. A high prevalence of exposure to Leptospira interrogans (10 serovars: Autumnalis, Bratislava, Canicola, Copenhageni, Grippotyphosa, Hardjo, Hebdomadis, Icterohaemorrhagiae, Pomona, and Pyrogenes) was detected in both the AF and PA sites. A greater diversity of serovars and higher antibody titers were found in the PA. Statistically significant differences between sites were found for L. interrogans, equine encephalitis virus, and porcine parvovirus. Based on physical evaluations, both AF and PA populations were healthy. The differences in the overall health profile of the AF and PA tapir populations appear to be associated with environmental factors and infectious diseases ecology. The extensive datasets on hematology, biochemistry, urinalysis, and microbiology results from this paper can be used as reference values for wild tapirs.

  8. Different Effects of Regional Species Pool on Plant Diversity between Forest and Grassland Biomes in Arid Northwest China.

    Science.gov (United States)

    Li, Liping; Liu, Yining; Wang, Xiangping; Fang, Jingyun; Wang, Qingchun; Zhang, Bengang; Xiao, Peigen; Mohammat, Anwar; Terwei, André

    2015-01-01

    Species pool hypothesis is broadly known and frequently tested in various regions and vegetation types. However it has not been tested in the arid Xinjiang region of China due to lack of data. Here with systematic data from references and field survey, we comprehensively examined species pool hypothesis in this region. Took species richness in 0.1° × 0.1° grid cells as regional species richness (RSR) which were obtained from the distribution maps of vascular plant species, and took species diversity of 190 and 103 plots in forest and grassland biomes across Xinjiang as local species richness (LSR), together with the digitalized soil pH and climate data, we tested the species pool hypothesis in this region. We found that: (1) the average RSR was higher in mountains than that in basins and it was negatively correlated with soil pH in mountains while positively correlated with soil pH in basins in Xinjiang; (2) RSR showed a positive correlation with mean annual precipitation (MAP) while showed a hump-shaped pattern with mean annual temperature (MAT); and the changing patterns of LSR were different for forest and grassland along the geographical and climate gradients; (3) LSR of forest was more affected by RSR than by climate, while on the contrary, LSR of grassland was more affected by climate than by RSR. Our results validated the species pool hypothesis in revealing that RSR had a significant role in shaping LSR patterns in addition to climate. We concluded that the relative effects of climate vs. RSR on LSR differed markedly between the forest and grassland communities across Xinjiang. Our results also showed that RSR revealed a contrasting relationship with soil pH in mountains and in basins, which might reflect differences in evolutionary processes of various habitats. In summary, our research systematically analyzed the correlation of species richness in regional and local scales in Xinjiang which provides more insights into the understanding of species pool

  9. Anthropization on the Cerrado biome in the Brazilian Uruçuí-Una Ecological Station estimated from orbital images

    Directory of Open Access Journals (Sweden)

    AC. Pereira

    Full Text Available In this study we analysed the dynamics of deforestation and burnings during the dry seasons from 2003 to 2008 in the Uruçuí-Una Ecological Station (UUES and its buffer zone, located in the Cerrado biome of the southwest of Piauí, a Brazil's State, based on images from the orbital sensors CCD/CBERS-2 and TM/Landsat-5. Two dates from each of the years were interpreted and analysed: one in the middle of the dry season and one at the end. The deforested areas were expanded through the period analysed and were larger in the buffer zone, suggesting a relative protection of the UUES. New cut-offs were predictable because of the early opening of roads that would become their limits. The burning scars were larger at the end of the dry season as a consequence of the management and implementation of agricultures and pastures. In 2004 and 2007 these scars were larger probably because of the increase of dry phytomass that every three years is big enough to spread the fire originated in the anthropogenic burnings through the native vegetation. This scenario reaffirms the need for: stronger enforcement in order to stop anthropisation in the UUES and a management plan, absent for this unit so far. These proceedings are urgent also because the UUES is located in one of the most preserved regions of the Cerrado and controversially where intense anthropisation in ongoing, which stresses the lack, need and urgency of biological conservation proceedings for the Piauí's southeastern Cerrado.

  10. Persistence of historical population structure in an endangered species despite near-complete biome conversion in California's San Joaquin Desert.

    Science.gov (United States)

    Richmond, Jonathan Q; Wood, Dustin A; Westphal, Michael F; Vandergast, Amy G; Leaché, Adam D; Saslaw, Lawrence R; Butterfield, H Scott; Fisher, Robert N

    2017-07-01

    Genomic responses to habitat conversion can be rapid, providing wildlife managers with time-limited opportunities to enact recovery efforts that use population connectivity information that reflects predisturbance landscapes. Despite near-complete biome conversion, such opportunities may still exist for the endemic fauna and flora of California's San Joaquin Desert, but comprehensive genetic data sets are lacking for nearly all species in the region. To fill this knowledge gap, we studied the rangewide population structure of the endangered blunt-nosed leopard lizard Gambelia sila, a San Joaquin Desert endemic, using restriction site-associated DNA (RAD), microsatellite and mtDNA data to test whether admixture patterns and estimates of effective migration surfaces (EEMS) can identify land areas with high population connectivity prior to the conversion of native xeric habitats. Clustering and phylogenetic analyses indicate a recent shared history between numerous isolated populations and EEMS reveals latent signals of corridors and barriers to gene flow over areas now replaced by agriculture and urbanization. Conflicting histories between the mtDNA and nuclear genomes are consistent with hybridization with the sister species G. wislizenii, raising important questions about where legal protection should end at the southern range limit of G. sila. Comparative analysis of different data sets also adds to a growing list of advantages in using RAD loci for genetic studies of rare species. We demonstrate how the results of this work can serve as an evolutionary guidance tool for managing endemic, arid-adapted taxa in one of the world's most compromised landscapes. Published 2017. This article is a U.S. Government work and is in the public domain in the USA.

  11. Continuidad de las innovaciones tecnológicas: el reto de las intervenciones biomédicas de mejora humana

    Directory of Open Access Journals (Sweden)

    López Frías, Francisco Javier

    2013-06-01

    Full Text Available One of the most recent debates among ethicists concerning the course of technological innovation is the human enhancement debate, which has been generated by the possibility of pushing human limits further by using the power of science. Many philosophers have warned us about the dangers of modifying human nature in a technical way. However, others argue that there are no morally salient differences between enhancing technical interventions and other kinds of technologies that human beings have taken to be usual for them. This paper shall critically analyze this argument. The main aim of this critical analysis is twofold, first, to show that people who make this argument are biased in several ways and, second, to claim that a more accurate and restricted definition of human enhancement technologies is needed.Uno de los debates más recientes referentes a la innovación tecnológica entre los especialistas en ética es aquel sobre la mejora humana, el cual ha surgido a raíz de la posibilidad de modificar los límites de la naturaleza humana usando el poder de la ciencia. Muchos filósofos nos han avisado del peligro de modificar técnicamente nuestra naturaleza humana. Otros, por contra, defienden que no existe diferencia moral relevante alguna entre las nuevas técnicas biomédicas de mejora y las tecnologías aceptadas como habituales por los seres humanos. Este artículo pretende examinar críticamente tal argumento. El fin de este análisis crítico será doble, primero, mostrar que los autores que defienden esta posición poseen visiones sesgadas y prejuiciosas de la realidad y, segundo, que es necesario establecer una definición más precisa y acotada del término “mejora”.

  12. Identification of beef production farms in the Pampas and Campos area that stand out in economic and environmental performance

    NARCIS (Netherlands)

    Modernel, P.; Dogliotti, S.; Alvarez, S.; Corbeels, M.; Picasso, V.; Tittonell, P.; Rossing, W.A.H.

    2018-01-01

    Worldwide, native grasslands are being converted to non-native pastures and cropland. This process threatens local grassland biomes as well as the livelihoods of farm families that utilize these grasslands. In the Río de la Plata grasslands region meat production and multispecies native grasslands

  13. Range-wide assessment of livestock grazing across the sagebrush biome

    Science.gov (United States)

    Veblen, Kari E.; Pyke, David A.; Jones, Christopher A.; Casazza, Michael L.; Assal, Timothy J.; Farinha, Melissa A.

    2011-01-01

    synthesize recommendations from federal and university rangeland science experts about how BLM might prioritize collection of different types of livestock grazing-related natural resource data. 4. Investigate whether range-wide datasets (Objective 1) could be used in conjunction with remotely sensed imagery to identify across broad scales (a) allotments potentially not meeting BLM Land Health Standards (LHS) and (b) allotments in which unmet standards might be attributable to livestock grazing. Objective 1: We identified four datasets that potentially could be used for analyses of livestock grazing effects on sagebrush ecosystems. First, we obtained the most current spatial data (typically up to 2007, 2008, or 2009) for all BLM allotments and compiled data into a coarse, topologically enforced dataset that delineated grazing allotment boundaries. Second, we obtained LHS evaluation data (as of 2007) for all allotments across all districts and regions; these data included date of most recent evaluation, BLM determinations of whether region-specific standards were met, and whether BLM deemed livestock to have contributed to any unmet standards. Third, we examined grazing records of three types: Actual Use (permittee-reported), Billed Use (BLM-reported), and Permitted Use (legally authorized). Finally, we explored the possibility of using existing Natural Resources Conservation Service (NRCS) Ecological Site Description (ESD) data to make up-to-date estimates of production and forage availability on BLM allotments. Objective 2: We investigated the availability of BLM livestock grazing-related monitoring data and the status of LHS across 310 randomly selected allotments in 13 BLM field offices. We found that, relative to other data types, the most commonly available monitoring data were Actual Use numbers (permittee-reported livestock numbers and season-of-use), followed by Photo Point, forage Utilization, and finally, Vegetation Trend measurement data. Data availability and

  14. A warmer and drier climate in the northern sagebrush biome does not promote cheatgrass invasion or change its response to fire.

    Science.gov (United States)

    Larson, Christian D; Lehnhoff, Erik A; Rew, Lisa J

    2017-12-01

    Dryland shrub communities have been degraded by a range of disturbances and now face additional stress from global climate change. The spring/summer growing season of the North American sagebrush biome is projected to become warmer and drier, which is expected to facilitate the expansion of the invasive annual grass Bromus tectorum (cheatgrass) and alter its response to fire in the northern extent of the biome. We tested these predictions with a factorial experiment with two levels of burning (spring burn and none) and three climate treatments (warming, warming + drying, and control) that was repeated over 3 years in a Montana sagebrush steppe. We expected the climate treatments to make B. tectorum more competitive with the native perennial grass community, especially Pseudoroegneria spicata, and alter its response to fire. Experimental warming and warming + drying reduced B. tectorum cover, biomass, and fecundity, but there was no response to fire except for fecundity, which increased; the native grass community was the most significant factor that affected B. tectorum metrics. The experimental climate treatments also negatively affected P. spicata, total native grass cover, and community biodiversity, while fire negatively affected total native grass cover, particularly when climate conditions were warmer and drier. Our short-term results indicate that without sufficient antecedent moisture and a significant disruption to the native perennial grass community, a change in climate to a warmer and drier spring/summer growing season in the northern sagebrush biome will not facilitate B. tectorum invasion or alter its response to fire.

  15. A Biomes Field Trip.

    Science.gov (United States)

    Leonard, William H.; And Others

    1983-01-01

    Describes a field trip designed to give students opportunities to experience relevant data leading to concepts in biogeography. Suggests that teachers (including college instructors) adapt the areas studied and procedures used to their own locations. Includes a suggested field trip handout. (JN)

  16. Biome engineering?2020

    OpenAIRE

    Br?ssow, Harald

    2016-01-01

    Summary The gut microbiome research is going from a descriptive into an intervention phase. To optimize beneficial microbe?host interaction, we need to understand how to steer the system by modulating the nutrient input with which the system is literally fed (e.g. diets, fibres, prebiotics, human milk oligosaccharides), and we must learn how to modulate the composition of the gut microbiota by adding beneficial microbes (e.g. probiotics, faecal transplants) and by eliminating disturbing micro...

  17. Biome engineering-2020.

    Science.gov (United States)

    Brüssow, Harald

    2016-09-01

    The gut microbiome research is going from a descriptive into an intervention phase. To optimize beneficial microbe-host interaction, we need to understand how to steer the system by modulating the nutrient input with which the system is literally fed (e.g. diets, fibres, prebiotics, human milk oligosaccharides), and we must learn how to modulate the composition of the gut microbiota by adding beneficial microbes (e.g. probiotics, faecal transplants) and by eliminating disturbing microbial members using, for example, bacteriophages in this highly complex ecosystem. The current status of the field is reviewed together with an outlook what might be expected until 2020, highlighting obstacles to progress and possible solutions to these problems. © 2016 The Author. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

  18. Acaricidal activity against Tetranychus urticae and essential oil composition of four Croton species from Caatinga biome in northeastern Brazil.

    Science.gov (United States)

    Neves, Ilzenayde Araújo; da Camara, Claudio Augusto Gomes

    2011-06-01

    Volatile components of essential oils from the leaves and stems of Croton jacobinensis, C. rhamnifolius, C. muscicapa and C. micans, which are medicinal plants found in the Caatinga biome of northeastern Brazil, were analyzed using GC and GC/MS. The acaricidal activity of these oils against Tetranychus urticae was evaluated using the fumigation method. Oil yields from the Croton species ranged from 1.1 +/- 0.0 to 0.6 +/- 0.0%, w/w, for leaves and 0.7 +/- 0.0 to 0.1 +/- 0.0% for stems. Sesquiterpenoids were dominant in all oils, except the stem oil from C. rhamnifolius, which exhibited a high monoterpene content, and the leaf and stem oils from C. muscicapa, which were rich in phenylpropanoids. The major volatile components of the leaf and stem oils from C. jacobinensis were (Z)-alpha-atlantone (24.3 +/- 0.4%) and trans-isolongifolanone (22.8 +/- 0.5%), respectively. The most abundant constituents detected in C. rhamnifolius were alpha-cedrene epoxide (23.3 +/- 0.1%) and caryophyllene oxide (21.9 +/- 0.0%) in the leaf oil, and camphor (16.6 +/- 0.5%) and tricyclene (12.8 +/- 0.1%) in the stem oil. Foenicolin was the main compound identified in the leaf (50.6 +/- 0.2%) and stem (72.7 +/- 0.6%) oils of C. muscicapa, while alpha-bulnesene (32.9 +/- 0.2%) and guaiol (17.9 +/- 0.7%) were the principal components of C. micans oils. These oils exhibited a high degree of toxicity in the fumigation assay. The stem oils from C. jacobinensis and C. rhamnifolius exhibited high lethality rates, with LC50 values of 0.3 and 0.2 microL/L of air after 24 h, respectively. The results suggest the potential use of stem essential oil, especially from C. rhamnifolius and C. jacobinensis, for the integrated control of Tetranychus urticae.

  19. Características biométricas de frutos e sementes de Oenocarpus bataua Mart. com procedência em Almeirim, Pará

    Directory of Open Access Journals (Sweden)

    S. A. Felizardo

    2015-12-01

    Full Text Available O patauá é uma palmeira pertencente à família botânica Arecaceae. A exploração deste tem como maiores potencialidades a produção de óleo vegetal. A biometria dos frutos é utilizada para verificar a variabilidade genética dentro de populações de uma mesma espécie e as relações desta com os fatores ambientais, além disso, pode contribuir para a tecnologia de produção de mudas de espécies nativas. Desse modo, este estudo tem por objetivo determinar as principais características biométricas de frutos e sementes, além do peso e do grau de umidade de patauá com procedência de Almeirim, Pará. O experimento foi conduzido no Laboratório de Tecnologia da Universidade Federal do Pará, Faculdade de Engenharia Florestal, Campus de Altamira. Os frutos foram colhidos maduros de matrizes selecionadas. A análise dos dados foi realizada com programa Microsoft Excel e o BIOESTAT 5.0. O comprimento e o diâmetro dos frutos e o comprimento e o diâmetro das sementes em estudo tiveram médias de 35,18 mm e 20,10 mm; 33,1 mm e 16,9 mm, respectivamente. A massa do fruto teve uma média de 9,6 g. Os maiores graus de umidade foram obtidos nos tratamentos com as sementes inteiras. O peso de mil sementes foi 5665 gramas. Biometric characteristics of fruits and seeds Oenocarpus bataua Mart. with Almeirim of origin, ParáABSTRACT - The patauá Is a palm tree belongs to the botanical family Arecaceae. The operation of these has the greatest potential to produce vegetable oil. Biometrics fruit is used to verify the genetic variability within populations of the same species and the relationship of this variability with environmental factors also may contribute to the production technology of seedlings of native species. Thus, this study aims to determine the main biometric characteristics of fruits and seeds, in addition to weight and degree of humidity of Oenocarpus bataua with origin of Almeirim, Pará. The experiment was conducted at the

  20. A Framework for Long-term Ecological Monitoring in Olympic National Park: Prototype for the Coniferous Forest Biome

    Science.gov (United States)

    Jenkins, Kurt; Woodward, Andrea; Schreiner, Ed

    2003-01-01

    This report is the result of a five-year collaboration between scientists of the U.S. Geological Survey Forest and Rangeland Ecosystem Science Center, Olympic Field Station, and the natural resources staff of Olympic National Park to develop a comprehensive strategy for monitoring natural resources of Olympic National Park. Olympic National Park is the National Park Serviceʼs prototype monitoring park, representing parks in the coniferous forest biome. Under the umbrella of the National Park Serviceʼs prototype parks program, U.S. Geological Survey and Olympic National Park staffs are obligated to:develop strategies and designs for monitoring the long-term health and integrity of national park ecosystems with a significant coniferous forest component.design exportable monitoring protocols that can be used by other parks within the coniferous forest biome (i.e., parks having similar environments), andcreate a demonstration area and ʻcenter of excellenceʼ for assisting other parks in developing ecological monitoring programs.Olympic National Park is part of the North Coast and Cascades Network, a network of seven Pacific Northwestern park units created recently by the National Park Serviceʼs Inventory and Monitoring Program to extend the monitoring of ʻvital signsʼ of park health to all National Park Service units. It is our intent and hope that the monitoring strategies and conceptual models described here will meet the overall purpose of the prototype parks monitoring program in proving useful not only to Olympic National Park, but also to parks within the North Coast and Cascades Network and elsewhere. Part I contains the conceptual design and sampling framework for the prototype long-term monitoring program in Olympic National Park. In this section, we explore key elements of monitoring design that help to ensure the spatial, ecological, and temporal integration of monitoring program elements and discuss approaches used to design an ecosystem

  1. Primer Programa Universitario de diplomado virtual y Maestría en Informática Biomédica en el Perú

    Directory of Open Access Journals (Sweden)

    Patricia J García

    Full Text Available El entrenamiento en Informática Biomédica es fundamental para enfrentar los desafíos de un mundo globalizado. Sin embargo, el desarrollo de programas de entrenamiento e investigación en posgrado en esta área son escasos en América Latina. A través del QUIPU: Centro Andino de Investigación y Entrenamiento en Informática para la Salud Global, se ha desarrollado el primer programa de Diplomado y Maestría en Informática Biomédica en la Región Andina. El objetivo de este artículo es describir la experiencia del programa. A la fecha han participado 51 alumnos de Perú, Chile, Ecuador, Colombia y Venezuela; procedentes de ministerios de salud, hospitales, universidades, centros de investigación, colegios profesionales y empresas privadas. Diecisiete cursos se impartieron con la participación presencial y virtual de profesores de Argentina, Chile, Colombia, Estados Unidos, México y Perú. Este programa está ya institucionalizado en la Facultad de Salud Pública y Administración de la Universidad Peruana Cayetano Heredia

  2. An assessment of leaf-litter and epigaeic ants (Hymenoptera: Formicidae living in different landscapes of the Atlantic Forest Biome in the State of Bahia, Brazil

    Directory of Open Access Journals (Sweden)

    Roberta de Jesus Santos

    2017-11-01

    Full Text Available The Brazilian Atlantic Forest has a rich biodiversity increasingly threatened by human activities. Since the colonial period, the coast of the state of Bahia is among the most affected regions of Brazil by anthropic pressure. Bahia encloses Atlantic Forest remnants distributed in an area reaching 100-200 km along the east-west axis, by 1,000 km along the north-south axis, parallel to the coast of the Atlantic Ocean. We report hereafter the results of an intensive field survey of leaf litter and epigaeic ants realized in forest remnants of the Atlantic Forest landscapes within the original extension of the biome in 11 localities distributed along four degrees of latitude in the state of Bahia. In each site, 16 plots were collected using pitfall and eight using Winkler traps. We identified 391 ant species belonging to 71 genera and nine subfamilies. Among all species recorded, 21 were common to the whole 11 localities, while 98 species were recorded in a single locality. This study highlights the richness and diversity of epigaeic and leaf-litter ants living in the northern part of the Brazilian Atlantic Forest, and is one of the most representative soil ants’ inventories ever done in this biome for a single state of Brazil.

  3. Sarchophagid flies (Insecta, Diptera from pig carcasses in Minas Gerais, Brazil, with nine new records from the Cerrado, a threatened Neotropical biome

    Directory of Open Access Journals (Sweden)

    Cátia A. Mello-Patiu

    2014-06-01

    Full Text Available Sarchophagid flies (Insecta, Diptera from pig carcasses in Minas Gerais, Brazil, with nine new records from the Cerrado, a threatened Neotropical biome. The diversity of the Sarcophagidae fauna of the Cerrado biome, also know as the Brazilian Savanna, is still underestimated. In this research we collected flies in the state of Minas Gerais, Brazil, during a Forensic Entomology experiment. Samples were collected throughout the decomposition process of domestic pig (Sus scrofa Linnaeus carcasses, and the experiments were conducted in areas of pasture and semideciduous forest. A total of 85,694 adult flesh flies belonging to 57 species were collected from all carcasses. New records for nine species of Sarcophaginae are provided, including the first record of Blaesoxipha (Acridiophaga caridei (Brèthes, 1906 to Brazil, and new occurrences of the following species for the Cerrado and/or for the state of Minas Gerais: Blaesoxipha (Acanthodotheca acridiophagoides (Lopes & Downs, 1951, Malacophagomyia filamenta (Dodge, 1964, Nephochaetopteryx orbitalis (Curran & Walley, 1934, Nephochaetopteryx cyaneiventris Lopes, 1936, Nephochaetopteryx pallidiventris Townsend, 1934, Oxysarcodexia occulta Lopes, 1946, Ravinia effrenata (Walker, 1861 and Sarcophaga (Neobellieria polistensis (Hall, 1933.

  4. Ethical aspects of biomedical animal experimentation Aspectos éticos de la experimentación biomédica en animales

    Directory of Open Access Journals (Sweden)

    John J. Estrada

    1991-03-01

    Full Text Available

    This article analyzes the ethical aspects of our relationship with animals specially as it concerns their use for biomedical research. A historical view on the subject is given and the opinions of the vivisectionists and antivivisectionists are discussed. Alternatives for the use of animals in biomedical research and toxicity testing are presented. A .complete bibliography is Included for those who want to further explore this subject.

    En el presente artículo se analizan los aspectos éticos de nuestra relación con los animales, con énfasis en la experimentación biomédica en los mismos. Se presenta una revisión histórica del tema y se discuten las opiniones de las dos corrientes, a favor y en contra, que hayal respecto, así como las alternativas para el uso de animales en investigación biomédica y en pruebas de toxicidad. Se incluye una amplia bibliografía que permite profundizar en el tema. 

  5. Biométrica, normalización de los cuerpos y control de fronteras en la Unión Europea

    Directory of Open Access Journals (Sweden)

    Estela Schindel

    2018-03-01

    Full Text Available Las tecnologías biométricas de control de fronteras están siendo crecientemente investigadas y empleadas por la Unión Europea. La combinación de información digitalizada proveniente de diversas fuentes corporales (iris, huellas dactilares, reconocimiento facial entre otras así como de potenciales indicadores conductuales plantean una serie de preguntas en términos del derecho a la privacidad y la protección de la integridad individual. Más allá de estas cuestiones, sin embargo, la biometría plantea interrogantes complejos en relación al estatuto mismo del cuerpo y de lo humano. Las llamadas “anomalías de registro” en la captura de datos biométricos revelan una construcción del cuerpo humano “normal”, mientras que otros son producidos como menos compatibles tecnológicamente. Esta construcción reproduce supuestos fuertemente asentados en el imaginario eurocéntrico, que construyen al otro no europeo como un ser cercano a la naturaleza. Al mismo tiempo, señala el ámbito al que se desplazan las disputas y desobediencias futuras, que es el del cuerpo mismo.

  6. Ants of three adjacent habitats of a transition region between the cerrado and caatinga biomes: the effects of heterogeneity and variation in canopy cover.

    Science.gov (United States)

    Neves, F S; Queiroz-Dantas, K S; da Rocha, W D; Delabie, J H C

    2013-06-01

    Habitat heterogeneity and complexity associated with variations in climatic conditions are important factors determining the structure of ant communities in different terrestrial ecosystems. The objective of this study was to describe the horizontal and vertical distribution patterns of the ant community associated with three adjacent habitats in a transition area between the Cerrado and Caatinga biomes at the Pandeiros River, state of Minas Gerais, Brazil. We tested the following hypotheses: (1) the richness and composition of ant species and functional group structure changes between different habitats and strata; (2) habitats with higher tree species richness and density support higher ant species richness; and (3) habitats with lower variation in canopy cover support higher ant species richness. Sampling was conducted in three adjacent habitats and at three vertical strata. Ant species richness was significantly different among vertical strata. Ant species composition was different among both habitats and vertical strata and functional group structure was divergent among habitats. Partitioning of the diversity revealed that the diversity for the three components was statistically different from the one expected by the null model; α and β 2 were higher and β 1 was lower than the values expected by chance. Tree density and variation in canopy cover negatively affected ant species richness. The occurrence of different species and the changing of functional group structures in different habitats and strata suggest an ecological-evolutionary relationship between ants and their habitats and emphasize the need to implement local conservation strategies in the ecotones between biomes.

  7. Chemical analyses and basic wood density in the root, stem and branch portions of barbatimão [(Stryphnodendron adstringens Coville] from the cerrado biome

    Directory of Open Access Journals (Sweden)

    Selma Lopes Goulart

    2012-03-01

    Full Text Available The Cerrado region has been a major provider to meet the growing demand of vegetal, animal or agribusiness consumer goods. However, studies on the vegetation of this biome are still incipient and that has been preventing use of Cerrado species, whether for economic purposes or as a way of restoring and recovering devastated areas. Due to lack of information concerning species of the Cerrado biome, this study was conducted in an attempt to gather information about the chemical constitution and basic wood density of the root, stem and branch portions of Stryphnodendron adstringens, also known as ‘barbatimão’. To that end, material was collected from the root and along stem and branch portions of three specimens of barbatimão. An increasing tendency was observed in holocellulose contents in the root-to-stem and root-to-branch direction. The opposite occurred with lignin and extractive contents. The lowest ash content was found in the stem portion. Values of basic density did not differ statistically between the root, stem and branch portions.

  8. Potencial de sequestro de carbono em diferentes biomas do Brasil Potential of soil carbon sequestration in different biomes of Brazil

    Directory of Open Access Journals (Sweden)

    João Luis Nunes Carvalho

    2010-04-01

    confirmed, related mainly to the increase of greenhouse gas emissions from burning of fossil fuel, deforestation, and adoption of inadequate agricultural land management practices. An inadequate soil use does not only contribute to intensified greenhouse effects but also creates problems related to soil sustainability due to the degradation of soil organic matter, which negatively reflects on soil physical and chemical attributes, as well as on its biodiversity. On the other hand, best management practices that maintain or even increase soil organic matter contents can minimize the effects of global warming. Examples of such management practices are no-tillage, rehabilitation of degraded pasture, reforestation of marginal lands and elimination of the burning activity among others. The aim of this review was to evaluate some of the main greenhouse gas sources related to agriculture and land use change, to present strategies to mitigate these emissions and to increase C sequestration in the soil-plant system, in three of the main biomes of Brazil.

  9. Runoff response for a peri-urban watershed in the Atlantic Forest Biome, southern Brazil, using the Kineros2 model

    Science.gov (United States)

    Beling, F. A.; Dias de Paiva, J.; Cauduro Dias de Paiva, E. M.; Heatwole, C.

    2011-12-01

    Simulating the hydrologic response of a watershed for different scenarios is an important tool for assessing the rational use of the land and natural resources, especially in environments where urbanization is not ever an organized procedure. This study used the Kineros2 event oriented hydrological model to simulate the runoff response of a 4.9 km2 peri-urban basin located in the Atlantic Forest biome in Southern Brazil, with 47% of the area being impermeable. The goal of the simulations was to estimate the characteristic parameters of the soils and land cover of the watershed to then enable the prediction of basin response for different land uses. To acheive this objective, the responses of ten measured rainfall-runoff events were used to calibrate five parameters of the model. The PEST (Model-Independent Parameter Estimation and Uncertainty Analysis) package was used for automatic calibration of the model parameters. The quality of results is shown in Nash-Sutcliffe efficiency index values varying from 0.64 up to 0.98, with an average value of 0.88. The average absolute error in the simulated peak flow was 4.5% and 20.7% in the simulated runoff volume. A cross-validation using the same events used in the calibration and using average values of the calibrated parameters. gave Nash-Sutcliffe index values varying from 0.26 up to 0.92, with an average value of 0.73. The average absolute error in the simulated peak flow and runoff volume were 22.7% and 25.6%, respectively. We used two validated events to simulate distinct scenarios, being representative of a wet and of dry antecedent moisture conditions. For a scenario of a totally forested land cover, the simulated peak flow and runoff volume for a dry condition changed -53% and -46% respectively, and for a wet condition, -63% and -41% respectively, relatively to the present land use. For a complete pasture land use, the simulated peak flow and runoff volume for a dry condition changed -31% and -27% respectively and

  10. A pollen-based biome reconstruction over the last 3.562 million years in the Far East Russian Arctic - new insights into climate-vegetation relationships at the regional scale

    Science.gov (United States)

    Tarasov, P. E.; Andreev, A. A.; Anderson, P. M.; Lozhkin, A. V.; Leipe, C.; Haltia, E.; Nowaczyk, N. R.; Wennrich, V.; Brigham-Grette, J.; Melles, M.

    2013-12-01

    The recent and fossil pollen data obtained under the frame of the multi-disciplinary international El'gygytgyn Drilling Project represent a unique archive, which allows the testing of a range of pollen-based reconstruction approaches and the deciphering of changes in the regional vegetation and climate. In the current study we provide details of the biome reconstruction method applied to the late Pliocene and Quaternary pollen records from Lake El'gygytgyn. All terrestrial pollen taxa identified in the spectra from Lake El'gygytgyn were assigned to major vegetation types (biomes), which today occur near the lake and in the broader region of eastern and northern Asia and, thus, could be potentially present in this region during the past. When applied to the pollen spectra from the middle Pleistocene to present, the method suggests (1) a predominance of tundra during the Holocene, (2) a short interval during the marine isotope stage (MIS) 5.5 interglacial distinguished by cold deciduous forest, and (3) long phases of taiga dominance during MIS 31 and, particularly, MIS 11.3. These two latter interglacials seem to be some of the longest and warmest intervals in the study region within the past million years. During the late Pliocene-early Pleistocene interval (i.e., ~3.562-2.200 Ma), there is good correspondence between the millennial-scale vegetation changes documented in the Lake El'gygytgyn record and the alternation of cold and warm marine isotope stages, which reflect changes in the global ice volume and sea level. The biome reconstruction demonstrates changes in the regional vegetation from generally warmer/wetter environments of the earlier (i.e., Pliocene) interval towards colder/drier environments of the Pleistocene. The reconstruction indicates that the taxon-rich cool mixed and cool conifer forest biomes are mostly characteristic of the time prior to MIS G16, whereas the tundra biome becomes a prominent feature starting from MIS G6. These results

  11. Biogeochemical modelling vs. tree-ring data - comparison of forest ecosystem productivity estimates

    Science.gov (United States)

    Zorana Ostrogović Sever, Maša; Barcza, Zoltán; Hidy, Dóra; Paladinić, Elvis; Kern, Anikó; Marjanović, Hrvoje

    2017-04-01

    Forest ecosystems are sensitive to environmental changes as well as human-induce disturbances, therefore process-based models with integrated management modules represent valuable tool for estimating and forecasting forest ecosystem productivity under changing conditions. Biogeochemical model Biome-BGC simulates carbon, nitrogen and water fluxes, and it is widely used for different terrestrial ecosystems. It was modified and parameterised by many researchers in the past to meet the specific local conditions. In this research, we used recently published improved version of the model Biome-BGCMuSo (BBGCMuSo), with multilayer soil module and integrated management module. The aim of our research is to validate modelling results of forest ecosystem productivity (NPP) from BBGCMuSo model with observed productivity estimated from an extensive dataset of tree-rings. The research was conducted in two distinct forest complexes of managed Pedunculate oak in SE Europe (Croatia), namely Pokupsko basin and Spačva basin. First, we parameterized BBGCMuSo model at a local level using eddy-covariance (EC) data from Jastrebarsko EC site. Parameterized model was used for the assessment of productivity on a larger scale. Results of NPP assessment with BBGCMuSo are compared with NPP estimated from tree ring data taken from trees on over 100 plots in both forest complexes. Keywords: Biome-BGCMuSo, forest productivity, model parameterization, NPP, Pedunculate oak

  12. Updated estimate of carbon balance on Russian territory

    Energy Technology Data Exchange (ETDEWEB)

    Kurganova, I. N.; Kudeyarov, V. N.; Gerenyu, V. O. Lopes de (Institute of Physicochemical and Biological Problems in Soil Science, RAS, Pushchino (Russian Federation)), e-mail: ikurg@mail.ru

    2010-11-15

    The land use system in Russia changed considerably after 1990: 30.2 million ha of croplands were abandoned. Based on the own field investigations that were carried out in abandoned lands of different age (Luvic Phaeozems, deciduous forest zone; Moscow region, 54 deg 50' N, 37 deg 37' E), it has been shown that after 4.5 yr of abandonment, the former croplands acted as a stable sink of CO{sub 2}. The net ecosystem production (NEP) in the post-agrogenic ecosystems averaged 245 +- 73gCm-2 yr-1 for the first 15 yr after land use change that corresponds to an estimated 74 +- 22 Tg C yr-1 for the total area of abandoned lands in Russian Federation. Currently, the Russian territory acts as an absolute sink of atmospheric CO{sub 2} at a rate about 0.90 Pg C yr-1. Using three different approaches, it was demonstrated that after 1990, the carbon sequestration in Russian soils (0.20 cm layer) has averaged 34 +- 2.2 Tg C yr-1. This soil C forms net biome production (NBP) where carbon lifetime is much longer than in 'Kyoto forests'. Thus, the post-agrogenic ecosystems in Russia provide with the additional CO{sub 2} sink in NEP and NBP that could annually compensate about 25% of the current fossil fuel emissions in the Russian Federation

  13. Comparison and Validation of Long Time Serial Global GEOV1 and Regional Australian MODIS Fractional Vegetation Cover Products Over the Australian Continent

    OpenAIRE

    Ding, Yanling; Zheng, Xingming; Jiang, Tao; Zhao, Kai

    2015-01-01

    Fractional vegetation cover (FVC) is one of the most critical parameters in monitoring vegetation status. Comprehensive assessment of the FVC products is critical for their improvement and use in land surface models. This study investigates the performances of two major long time serial FVC products: GEOV1 and Australian MODIS. The spatial and temporal consistencies of these products were compared during the 2000–2012 period over the main biome types across the Australian continent. Their acc...

  14. Desenvolvimento de um microdispositivo biomédico para a separação de células sanguíneas

    OpenAIRE

    Novais, Susana; Pinho, Diana; Pereira, Ana I.; Mujika, Maite; Arana, Sergio; Lima, R.

    2013-01-01

    Neste trabalho procedeu-se ao desenho e implantação de um dispositivo biomédico, com capacidade de realizar a separação das células sanguíneas da camada de plasma. Numa primeira fase do trabalho realizou-se o desenho e fabricação do dispositivo, através da técnica de litografia suave. A segunda fase consistiu no estudo do escoamento sanguíneo com o objetivo de analisar o efeito das constrições na variação da espessura camada de plasma. Concluímos que a constrição proporciona um aumento da esp...

  15. Biome-specific effects of nitrogen and phosphorus on the photosynthetic characteristics of trees at a forest-savanna boundary in Cameroon.

    Science.gov (United States)

    Domingues, Tomas Ferreira; Ishida, F Yoko; Feldpausch, Ted R; Grace, John; Meir, Patrick; Saiz, Gustavo; Sene, Olivier; Schrodt, Franziska; Sonké, Bonaventure; Taedoumg, Herman; Veenendaal, Elmar M; Lewis, Simon; Lloyd, Jon

    2015-07-01

    Photosynthesis/nutrient relationships of proximally growing forest and savanna trees were determined in an ecotonal region of Cameroon (Africa). Although area-based foliar N concentrations were typically lower for savanna trees, there was no difference in photosynthetic rates between the two vegetation formation types. Opposite to N, area-based P concentrations were-on average-slightly lower for forest trees; a dependency of photosynthetic characteristics on foliar P was only evident for savanna trees. Thus savanna trees use N more efficiently than their forest counterparts, but only in the presence of relatively high foliar P. Along with some other recent studies, these results suggest that both N and P are important modulators of woody tropical plant photosynthetic capacities, influencing photosynthetic metabolism in different ways that are also biome specific. Attempts to find simple unifying equations to describe woody tropical vegetation photosynthesis-nutrient relationships are likely to meet with failure, with ecophysiological distinctions between forest and savanna requiring acknowledgement.

  16. Caracterização biométrica, física e química de frutos da palmeira bocaiuva Acrocomia aculeata (Jacq Lodd

    Directory of Open Access Journals (Sweden)

    Eliana Janet Sanjinez-Argandoña

    2011-09-01

    Full Text Available Frutos de palmeira bocaiuva (Acrocomia aculeata (Jacq. Lodd., coletados em Dourados (MS e Presidente Epitácio (SP, foram analisados quanto ao aspecto biométrico, a composição química e as características físicas, visando a avaliar seu potencial alimentício. Os frutos de bocaiuva das regiões de procedência não apresentaram diferenças significativas entre si nas características biométricas. O rendimento médio da polpa foi de 42% em relação ao fruto inteiro, sendo superior ao encontrado na literatura para outros frutos de palmeiras. As determinações físicas e químicas da polpa dos frutos das regiões de Mato Grosso do Sul e São Paulo caracterizam a polpa como sendo pouco ácida (pH 5,70 a 6,29. As amostras de Dourados - MS, foram consideradas mais doces (14,53% de açúcares redutores totais e com maior teor de vitamina C (34,57 mg.100 g-1 em relação às amostras de Presidente Epitácio-SP (11,46 mg.100 g-1. Porém, a intensidade da cor amarelo-laranja foi maior na polpa dos frutos de Presidente Epitácio (SP, sugerindo maior conteúdo de carotenoides.

  17. Dados biométricos de frutos e sementes de Hymenaea courbaril var. stilbocarpa (Hayne Y. T. Lee & Langenh e H. martiana Hayne

    Directory of Open Access Journals (Sweden)

    Gabrielle Rodrigues Cunha-Silva

    2012-05-01

    Full Text Available http://dx.doi.org/10.5007/2175-7925.2012v25n3p121   O Cerrado apresenta alta biodiversidade de espécies, porém estimativas indicam que 48% de sua vegetação já foram desmatados ou alterados. Diante deste cenário, há iminente demanda para recuperação de áreas degradadas, e estudos que visem conhecer a biometria das espécies nativas são relevantes para este propósito. Este trabalho objetivou caracterizar a biometria de frutos e sementes de Hymenaea courbaril var. stilbocarpa e H. martiana, e comparar as características biométricas de diferentes espécies do mesmo gênero para auxiliar na identificação taxonômica destas espécies. No entorno do município de Itapuranga – GO foram amostradas cinco árvores matrizes de H. courbaril var. stilbocarpa e três de H. martiana, destas foram coletados frutos, os quais foram medidos e pesados. As espécies em estudo se diferenciaram significativamente em relação ao comprimento dos frutos. Com relação às sementes, H. martiana apresentou parâmetros biométricos com os maiores valores. Além disso, frutos e sementes das duas espécies apresentaram pesos significativamente diferentes. A análise comparativa entre as espécies do gênero mostrou que H. intermedia pode ser facilmente diferenciada das demais por possuir frutos grandes, já H. martiana apresentou sementes grandes e robustas. As informações apresentadas são relevantes e ratificam a importância da biometria de frutos e sementes para diferenciação de espécies.

  18. Radiation induced a supra-additive cytotoxic effect in head and neck carcinoma cell lines when combined with plant extracts from Brazilian Cerrado biome.

    Science.gov (United States)

    Elias, Silvia T; Borges, Gabriel A; Amorim, Danilo A; Rêgo, Daniela F; Simeoni, Luiz A; Silveira, Dâmaris; Fonseca-Bazzo, Yris Maria; Paula, José E; Fagg, Christopher William; Barros, Ivelone M C; Abreu, Wenzel C; Pinto-Júnior, Décio S; Magalhães, Pérola O; Neves, Francisco A R; Lofrano-Porto, Adriana; Guerra, Eliete N S

    2015-04-01

    Antineoplastic effects of molecules derived from plants have recently gained increasing attention as an additive to traditional therapies. The aim of this study was to evaluate the cytotoxic activity of plant extracts from the Brazilian Cerrado biome associated with radiotherapy in head and neck carcinoma cells (HNSCC). Fifteen extracts derived from five Cerrado plants were tested in HNSCC cell lines (SCC-25, SCC-9, FaDu) and keratinocyte cells (HaCat). Cell cytotoxicity of extracts and association extract/radiation (2Gy/min) was assessed by MTT assay. Cisplatin (50 μg/mL) was used as a positive control. Extracts with the major cytotoxic activity were selected and their IC50 concentrations were defined. Apoptosis was assessed using flow cytometric analysis. Ten isolated extracts resulted in moderate cytotoxicity (>20 and ≤ 50 % of viable cells), while three extracts induced severe cytotoxic effects (≤ 20 % of viable cells). Plant extracts treatment improved radiotherapy cytotoxicity in all cell lines. Although plant extracts are not as potent as cisplatin plus radiation, in FaDu cells, seven extracts associated with irradiation showed cytotoxic activity similar or better than the association of cisplatin and radiation. Hexanic extract of Erythroxylum daphinites could induce apoptosis in oral cancer cells; however, necrosis was the prevalent kind of death in FaDu cells treated with hexanic extract of Erythroxylum suberosum. Pre-treatment of HNSCC cells with the extract derived from Cerrado plants followed by irradiation induced a supra-additive cytotoxic effect. This study highlights the potential biological relevance of the Cerrado biome when associated with traditional therapy for cancer.

  19. A spatial assessment of Brassica napus gene flow potential to wild and weedy relatives in the Fynbos Biome

    Directory of Open Access Journals (Sweden)

    J. M. Kalwij

    2010-01-01

    Full Text Available Gene flow between related plant species, and between transgenic and non-transgenic crop varieties, may be considered a form of biological invasion. Brassica napus (oilseed rape or canola and its relatives are well known for intra- and inter-specific gene flow, hybridisation and weediness. Gene flow associated with B. napus poses a potential ecological risk in the Fynbos Biome of South Africa, because of the existence of both naturalised (alien, weedy and native relatives in this region. This risk is particularly pertinent given the proposed use of B. napus for biofuel and the potential future introduction of herbicide-tolerant transgenic B. napus. Here we quantify the presence and co-occurrence of B. napus and its wild and weedy relatives in the Fynbos Biome, as a first step in the ecological risk assessment for this crop. Several alien and at least one native relative of B. napus were found to be prevalent in the region, and to be spatially congruent with B. napus fields. The first requirement for potential gene flow to occur has thus been met. In addition, a number of these species have elsewhere been found to be reproductively compatible with B. napus. Further assessment of the potential ecological risks associated with B. napus in South Africa is constrained by uncertainties in the phylogeny of the Brassicaceae, difficulties with morphology-based identification, and poor knowledge of the biology of several of the species involved, particularly under South African conditions.

  20. Vulnerabilities of ecosystems across U.S. National Parks to biome shifts, wildfire changes, and invasive species due to climate change

    Science.gov (United States)

    Gonzalez, P.; Eigenbrod, F.; Early, R.; Wang, F.; Notaro, M.; Williams, J. W.

    2016-12-01

    U.S. national parks conserve globally unique biodiversity. Yet, historical impacts of climate change and future vulnerabilities threaten species and ecosystems across this system of protected areas. Spatial analyses of historical climate and downscaled future climate projections show climate trends across the system. Spatial analyses of vegetation and wildfire (using a dynamic global vegetation model), habitat fragmentation (using remote sensing-derived land cover), and invasive species introduction and establishment show patterns of future vulnerability across the 50 U.S. states and 412 U.S. national parks. Results reveal high historical and projected temperature increases and precipitation changes, projected increases of wildfire across western U.S. national parks, high vulnerability to biome shifts and habitat fragmentation of up to one-third of National Park System area, and high vulnerability to invasive species of one-ninth of National Park System area. Ecosystems in the Sierra Nevada, Cascade Range, desert Southwest, and Laurentian Great Lakes are highly vulnerable to upslope and poleward shifts of the North America sequence of biomes: temperate shrubland - temperate broadleaf forest - temperate mixed forest - temperate conifer forest - subalpine and boreal forest - alpine and tundra. These areas include Grand Canyon, Mount Rainier, and Yosemite National Parks. The southwestern U.S., including Grand Canyon and Sequoia National Parks, is vulnerable to increases in wildfire. The eastern and midwestern U.S., including Great Smokey Mountains and Voyageurs National Parks, are highly vulnerable to invasive species. These results identify vulnerable areas and potential refugia to help prioritize areas for future natural resource management actions and biodiversity conservation in U.S. national parks.

  1. Production, purification and oxidative folding of the mouse recombinant prion protein

    Czech Academy of Sciences Publication Activity Database

    Pavlíček, A.; Bednárová, Lucie; Holada, K.

    2007-01-01

    Roč. 52, č. 4 (2007), s. 391-397 ISSN 0015-5632 R&D Projects: GA ČR GD310/05/H533 Grant - others:GA ČR(CZ) GA310/04/0419 Institutional research plan: CEZ:AV0Z40550506 Keywords : recombinant prion protein * production * purification * folding Subject RIV: CE - Biochemistry Impact factor: 0.989, year: 2007 http://www.biomed.cas.cz/mbu/folia/

  2. An analysis of the effect of biological and physical parameters of a wetlands grass biome on the spectral modeling of phytomass and primary productivity

    Science.gov (United States)

    Butera, M. K.; Frick, A.

    1984-01-01

    Aircraft simulated thematic mapper data and field data were acquired in the fall and spring to analyze the relationship of spectral response and biomass for the marsh grass Spartina patens. Regression results indicate no simple relationship exists for TMS spectral response and biomass with a high R sq. However, results show a consistent relationship between spectral response and the percent live vegetation (by weight) and percent interstitial standing surface water (by area) as independent variables. It is suggested that the reflected energy of a pixel represents a mixture of surface constituents. It is recommended that alternative remote sensors be employed to account for the pixel constituents of live and dead vegetation, litter, and standing water.

  3. Reforming and synthesis of dimethoxymethane and dimethyl ether for H2 production

    International Nuclear Information System (INIS)

    Sun, Q.

    2007-07-01

    This work is related to the subject 'Clean Energy'. Dimethoxymethane (DMM) is a suitable H 2 storage material for mobile application due to its high H 2 content and non-toxicity. It was found that DMM can be 100% reformed to produce H 2 on a complex catalyst composed of an acid component such as Nb 2 O 5 or niobium phosphate (NbP) combined with CuZnO/Al 2 O 3 catalyst. Moreover, V 2 O 5 /NbP and V 2 O 5 -TiO 2 -SO 4 2- catalysts were prepared and evaluated in the reaction of selective oxidation of methanol to DMM. The surface acidic and redox properties of V 2 O 5 -TiO 2 -SO 4 2- were correlated to the reactive performance of the catalysts. The adsorption properties of Nb 2 O 5 and NbP used in methanol dehydration reaction were also studied. (author)

  4. A Comparative Study of Basic, Amphoteric, and Acidic Catalysts in the Oxidative Coupling of Methanol and Ethanol for Acrolein Production.

    Science.gov (United States)

    Lilić, Aleksandra; Wei, Tiantian; Bennici, Simona; Devaux, Jean-François; Dubois, Jean-Luc; Auroux, Aline

    2017-09-11

    The impact of acid/base properties (determined by adsorption microcalorimetry) of various catalysts on the cross-aldolization of acetaldehyde and formaldehyde leading to acrolein was methodically studied in oxidizing conditions starting from a mixture of methanol and ethanol. The aldol condensation and further dehydration to acrolein were carried out on catalysts presenting various acid/base properties (MgO, Mg-Al oxides, Mg/SiO 2 , NbP, and heteropolyanions on silica, HPA/SiO 2 ). Thermodynamic calculations revealed that cross-aldolization is always favored compared with self-aldolization of acetaldehyde, which leads to crotonaldehyde formation. The presence of strong basic sites is shown to be necessary, but a too high amount drastically increases CO x production. On strong acid sites, production of acrolein and carbon oxides (CO x ) does not increase with temperature. The optimal catalyst for this process should be amphoteric with a balanced acid/base cooperation of medium strength sites and a small amount (150 kJ mol -1 ). © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  5. Local Validation of Global Estimates of Biosphere Properties: Synthesis of Scaling Methods and Results Across Several Major Biomes

    Science.gov (United States)

    Cohen, Warren B.; Wessman, Carol A.; Aber, John D.; VanderCaslte, John R.; Running, Steven W.

    1998-01-01

    To assist in validating future MODIS land cover, LAI, IPAR, and NPP products, this project conducted a series of prototyping exercises that resulted in enhanced understanding of the issues regarding such validation. As a result, we have several papers to appear as a special issue of Remote Sensing of Environment in 1999. Also, we have been successful at obtaining a follow-on grant to pursue actual validation of these products over the next several years. This document consists of a delivery letter, including a listing of published papers.

  6. Biomédica, 2012: diez años en el Index Medicus y cinco en el Science Citation Index

    Directory of Open Access Journals (Sweden)

    Comité Editorial Biomédica

    2012-06-01

    Full Text Available La revista Biomédica del Instituto Nacional de Salud es una publicación trimestral, eminentemente científica, en la que se publican gratuitamente y con acceso abierto, los resultados de las investigaciones en salud y biomedicina del Instituto y de otras instituciones públicas y privadas a nivel nacional e internacional, luego de un exhaustivo proceso editorial que incluye, necesariamente, las rigurosas evaluaciones por pares de la comunidad científica, reconocidos expertos nacionales e internacionales en las diferentes áreas del conocimiento. El cumplir diez años de haber sido incluida en el Index Medicus y cinco en el Science Citation Index –los índices internacionales más importantes para las revistas de ciencias de la salud– es un acontecimiento significativo para la revista. Sin duda alguna, es un momento que marca la madurez de la revista y, a la vez, una oportunidad para reflexionar sobre los logros obtenidos, analizar los desafíos que debe enfrentar y planear la mejor forma de resolverlos. La primera edición de Biomédica se publicó en 1981 y, desde entonces, los miembros de los diferentes comités editoriales siempre han estado atentos a la adopción de los lineamientos internacionales para el mejoramiento de este tipo de publicaciones científicas. Como resultado de ello, la revista ha alcanzado los más altos estándares de edición, como los recomendados por el International Committee of Medical Journal Editors (1. Además de mantener los criterios de objetividad y calidad del material enviado para publicación, la revista implementó un proceso editorial propio que incluye revisiones editoriales iniciales, intermedias y finales por miembros del Comité Editorial o Científico, evaluación por pares y estricta corrección de estilo por expertos en el idioma español e inglés, además de comunicación continua y directa con los autores, diagramación pulcra y dinámica, publicación impresa oportuna y de calidad, y

  7. La universidad intervenida: Las nuevas técnicas del poder y el biomárqueting

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    Daniel Reyes-Lara

    2015-07-01

    Full Text Available Modern University has been under attack by the business logic. Intensified marketing of knowledge production represents a series of new challenges for the burst of critical thinking. This paper discusses these challenges from a technological perspective, highlighting how the new techniques of power operate at a university level. Biomarketing configuration stands out as a post- disciplinary government technology that marks a shift of power objectives, shifting from control of our bodies (individual-population to our commercial exchanges (industry - thinking.

  8. The variability of runoff and soil erosion in the Brazilian Cerrado biome due to the potential land use and climate changes

    Science.gov (United States)

    Alexandre Ayach Anache, Jamil; Wendland, Edson; Malacarne Pinheiro Rosalem, Lívia; Srivastava, Anurag; Flanagan, Dennis

    2017-04-01

    Changes in land use and climate can influence runoff and soil loss, threatening soil and water conservation in the Cerrado biome in Brazil. Due to the lack of long term observed data for runoff and soil erosion in Brazil, the adoption of a process-based model was necessary, representing the variability of both variables in a continuous simulation approach. Thus, we aimed to calibrate WEPP (Water Erosion Prediction Project) model for different land uses (undisturbed Cerrado, fallow, pasture, and sugarcane) under subtropical conditions inside the Cerrado biome; predict runoff and soil erosion for these different land uses; and simulate runoff and soil erosion considering climate change scenarios. We performed the model calibration using a 4-year dataset of observed runoff and soil loss in four different land uses (undisturbed Cerrado, fallow, pasture, and sugarcane). The WEPP model components (climate, topography, soil, and management) were calibrated according to field data. However, soil and management were optimized according to each land use using a parameter estimation tool. The observations were conducted between 2012 and 2015 in experimental plots (5 m width, 20 m length, 9% slope gradient, 3 replicates per treatment). The simulations were done using the calibrated WEPP model components, but changing the 4-year observed climate file by a 100-year dataset created with CLIGEN (weather generator) based on regional climate statistics. Afterwards, using MarkSim DSSAT Weather File Generator, runoff and soil loss were simulated using future climate scenarios for 2030, 2060, and 2090. To analyze the data, we used non-parametric statistics as data do not follow normal distribution. The results show that WEPP model had an acceptable performance for the considered conditions. In addition, both land use and climate can influence on runoff and soil loss rates. Potential climate changes which consider the increase of rainfall intensities and depths in the studied region may

  9. Comparison and Validation of Long Time Serial Global GEOV1 and Regional Australian MODIS Fractional Vegetation Cover Products Over the Australian Continent

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    Yanling Ding

    2015-05-01

    Full Text Available Fractional vegetation cover (FVC is one of the most critical parameters in monitoring vegetation status. Comprehensive assessment of the FVC products is critical for their improvement and use in land surface models. This study investigates the performances of two major long time serial FVC products: GEOV1 and Australian MODIS. The spatial and temporal consistencies of these products were compared during the 2000–2012 period over the main biome types across the Australian continent. Their accuracies were validated by 443 FVC in-situ measurements during the 2011–2012 period. Our results show that there are strong correlations between the GEOV1 and Australian MODIS FVC products over the main Australian continent while they exhibit large differences and uncertainties in the coastal regions covered by dense forests. GEOV1 and Australian MODIS describe similar seasonal variations over the main biome types with differences in magnitude, while Australian MODIS exhibit unstable temporal variations over grasslands and shifted seasonal variations over evergreen broadleaf forests. The GEOV1 and Australian MODIS products overestimate FVC values over the biome types with high vegetation density and underestimate FVC in sparsely vegetated areas and grasslands. Overall, the GEOV1 and Australian MODIS FVC products agree with in-situ FVC values with a RMSE around 0.10 over the Australian continent.

  10. The response of amino acid cycling to global change across multiple biomes: Feedbacks on soil nitrogen availability

    Science.gov (United States)

    Brzostek, E. R.; Finzi, A. C.

    2010-12-01

    The cycling of organic nitrogen (N) in soil links soil organic matter decomposition to ecosystem productivity. Amino acids are a key pool of organic N in the soil, whose cycling is sensitive to alterations in microbial demand for carbon and N. Further, the amino acids released from the breakdown of protein by proteolytic enzymes are an important source of N that supports terrestrial productivity. The objective of this study was to measure changes in amino acid cycling in response to experimental alterations of precipitation and temperature in twelve global change experiments during the 2009 growing season. The study sites ranged from arctic tundra to xeric grasslands. The treatments experimentally increased temperature, increased or decreased precipitation, or some combination of both factors. The response of amino acid cycling to temperature and precipitation manipulations tended to be site specific, but the responses could be placed into a common framework. Changes in soil moisture drove a large response in amino acid cycling. Precipitation augmentation in xeric and mesic sites increased both amino acid pool sizes and production. However, treatments that decreased precipitation drove decreases in amino acid cycling in xeric sites, but led to increases in amino acid cycling in more mesic sites. Across sites, the response to soil warming was horizon specific. Amino acid cycling in organic rich horizons responded positively to warming, while negative responses were exhibited in lower mineral soil horizons. The variable response likely reflects a higher availability of protein substrate to sustain high rates of proteolytic enzyme activity in organic rich horizons. Overall, these results suggest that soil moisture and the availability of protein substrate may be important factors that mediate the response of amino acid cycling to predicted increases in soil temperatures.

  11. Assessing the impacts of climate change and nitrogen deposition on Norway spruce growth in Austria with BIOME-BGC

    Energy Technology Data Exchange (ETDEWEB)

    Eastaugh, Chris S.; Potzelsberger, Elisabeth; Hasenaueur, Hubert

    2011-03-15

    The purpose of this study is to determine if the climate change has had an apparent impact in Austrian forests. This research has been conducted on Norway spruce forests as this is the predominant species in Austria. Growth data between regions which have different temperature and precipitation trendsw was then compared, with results showing increased productivity in all regions thus implying that growth of the forest is driven by other factors than climate. This conclusion is consistent with previous studies supporting that forest growth is mainly driven by increasing nitrogen deposition.

  12. First report of geophilid centipedes of the genus Ribautia (Myriapoda: Chilopoda: Geophilomorpha) from the Atlantic Forest biome, with description of a new miniature species from Misiones Province, Northeastern Argentina.

    Science.gov (United States)

    Pereira, Luis Alberto

    2014-03-18

    Ribautia paranaensis sp. nov. a new miniature species of geophilid centipede from the Upper Paraná Atlantic Forest (the westernmost of the fifteen ecoregions comprising the Atlantic Forest biome sensu Di Bitetti et al. 2003), is herein described and illustrated. The new species is characterized by having the coxal organs grouped in clusters (one of these in each coxopleuron of the ultimate leg-bearing segment) and a claw-like pretarsus in the ultimate legs; these traits being shared by three other Neotropical members of the genus, i.e., R. combinata Pereira, Uliana & Minelli, 2006 (from the Amazonian rainforest of Peru), R. jakulicai Pereira, 2007 (from the Yungas rainforest of Northwestern Argentina), and R. lewisi Pereira, 2013 (collected in a gallery forest in the Mesopotamian region, Northeastern Argentina). R. paranaensis sp. nov. represents the first report of Ribautia Brölemann, 1909 in the entire Atlantic Forest biome, and the third confirmed record of the taxon from Argentina.

  13. Assessment of the Proximity of MODIS Active Fire Detections to Roads and Navigable Rivers in the Brazilian Tropical Moist Forest Biome

    Science.gov (United States)

    Kumar, S.; Roy, D. P.; Souza, C., Jr.; Cochrane, M. A.; Boschetti, L.

    2011-12-01

    The Brazilian tropical moist forest biome supports the world's largest contiguous area of tropical forests and is experiencing high rates of deforestation. Fires are proxy indicators of human pressure and deforestation. Previous studies using satellite active fire detections and the official Brazilian road vector data (IBGE- Brazilian Institute of Geography and Statistics), including state, federal and some private roads, indicate that the majority of fires occur close to roads. In this quantitative study a new data set that also includes unofficial roads and navigable rivers acquired from Imazon (a non-profit research institution with a mission to promote sustainable development in the Amazon) are used to quantify annual distance distributions of MODIS Aqua and Terra satellite active fire detections for 2003 to 2009. The majority (> 93%) of active fire detections are within 10 km of a road or a navigable river bank. Inter-state and inter-annual differences in the distance distributions, that may capture inter-annual rates of road expansion and fire variability, are also presented. These results may be useful for improvement of regional fire prediction models.

  14. The role of phytophysiognomies and seasonality on the structure of ground-dwelling anuran (Amphibia in the Pampa biome, southern Brazil

    Directory of Open Access Journals (Sweden)

    FRANCIELE P. MARAGNO

    2013-09-01

    Full Text Available ABSTRACT Considering that habitat use by amphibians is related both with climate and environmental features, we tested the hypothesis that anuran assemblages found in different phytophysiognomies and in different seasons vary in structure. Additionally, we searched for species which can be indicators of habitat and seasons. The study was conducted in the Pampa biome, southern Brazil. Sampling was done through pitfall traps placed in three phytophysiognomies: grassland, ecotone grassland/forest; and forest. The seasonality factor was created by grouping months in warn and cold seasons. Sixteen species were found and the assemblages were influenced both by phytophysiognomies and climatic seasonality. In a paired comparison, the three phytophysiognomies differed in structure of assemblage from each other. Physalaemus henselii, P. riograndensis, Pseudopaludicola falcipes and Pseudis minuta were indicators of ecotone. Leptodactylus gracilis and Physalaemus biligonigerus were indicators of grassland. None species was indicator of forest. Most of the species were indicators of warm season: Elachistocleis bicolor, Leptodactylus fuscus, L. gracilis, L. latinasus, L. latrans, L. mystacinus, Physalaemus biligonigerus, P. cuvieri and Pseudis minuta. None species was indicator of cold season. We found that even for species of open areas, as Pampa, heterogeneous phytophysiognomies are important for maintaining abundance and constancy of populations of anuran.

  15. Mortalidad en crías de Aotus sp. (Primates: Cebidae en cautiverio: una limitante para estudios biomédicos con modelos animales

    Directory of Open Access Journals (Sweden)

    Nofre Sánchez

    2006-07-01

    Full Text Available Aotus es un primate neotropical nocturno usado como modelo experimental en investigaciones biomédicas. En 1979 el Centro de Reproducción y Conservación de Primates del Proyecto Peruano de Primatologia (CRCP-PPP Iquitos- Perú, inició la cría en cautiverio del Aotus nancymae y el A. vociferans, siendo un objetivo de la crianza, la alta supervivencia de las crías. El presente estudio clasifica y describe la mortalidad en crías de un día a siete meses de edad, en el periodo 1988-2002 ocurridos en el CRCP. La información se obtuvo de los protocolos de necropsia realizados en A. nancymae (92=9% y A. vociferans (67=16%, sobre un total de 1453 nacimientos (1033 A. nancymae y 420 A. vociferans. Las causas de mortalidad son neumonías (37%, ocurridos desde la primera semana hasta un mes de edad en ambas especies; procesos gastrointestinales (26%, que afectó a crías de ambas especies de uno a cuatro meses; rechazos de los padres (18%, cuadros asociados con traumas múltiples observado en crías de un día hasta el primer mes en ambas especies; desnutrición (15%, registrado en ejemplares de ambas especies a partir del primer mes; las causas no determinadas (10% y trastornos de otros sistemas(3%.

  16. The exotic palm Roystonea oleracea (Jacq. O. F. Cook (Arecaceae on an island within the Atlantic Forest Biome: naturalization and influence on seedling recruitment

    Directory of Open Access Journals (Sweden)

    Rodrigo Zucaratto

    2014-09-01

    Full Text Available Here, we investigated the population structure of the exotic palm Roystonea oleracea in a swamp on an island within the Atlantic Forest Biome, evaluating its influence on the seedling recruitment of other plant species. The population structure was analyzed in six 4 × 30 m plots, within which we categorized all individuals by ontogenetic stage. The influence of R. oleracea on the seedling recruitment of other plant species was evaluated in 2 × 2 m plots established beneath palm crowns and in adjacent areas without palms. We recorded 53 R. oleracea individuals. The majority (56.6% of the R. oleracea population was composed of immature adults, followed by mature adults. The density, richness and diversity of seedling species differed significantly between areas beneath and away from palms, the values being lower beneath R. oleracea crowns. Our results indicate that R. oleracea recruitment does not require human intervention, the number of reproductive individuals characterizing successful naturalization. This underscores the need for management policies aimed at palm eradication in order to avoid reductions in biodiversity.

  17. Richness and abundance of the cardini group of Drosophila (Diptera, Drosophilidae in the Caatinga and Atlantic Forest biomes in northeastern Brazil

    Directory of Open Access Journals (Sweden)

    CLÁUDIA ROHDE

    2014-12-01

    Full Text Available Brazil has a high diversity of flies of the genus Drosophila, and part of this richness is represented by the cardini group. We analyzed the fluctuations in the richness and abundance of this group, in environments that had never previously been studied in the northeastern region of Brazil. Among the 28,204 drosophilids sampled, 1,294 belonged to the cardini group and were represented by D. polymorpha, D. cardini, D. neocardini and D. cardinoides. Occurrences of D. neocardini and D. cardinoides were registered for the first time in the Caatinga. In this biome, D. cardini stood out as having the highest abundance, and D. polymorpha was not observed. In the coastal Atlantic Forest, D. cardini was not registered, but D. polymorpha was found in all the localities investigated. Mangrove swamps were the environment with the lowest abundance and richness of the cardini group. The High-altitude Forest presented the highest richness of this group. We suggest that the high abundance of D. polymorpha in the High-altitude Forest and in the coastal Atlantic Forest may be a reflection of the historical relationship between these two environments.

  18. Autogestão da saúde e do corpo: a influência do paradigma biomédico

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    Sílvia Maria Agatti Lüdorf

    2012-09-01

    Full Text Available A presente resenha se refere à obra "Corpo em evidência: a ciência e a redefinição do humano", de autoria de Francisco Ortega e de Rafaela Zorzanelli. Por meio de uma linguagem acessível e instigante, calcados em uma reflexão crítica e atual, os autores abordam como o corpo vem sendo cada vez mais compreendido pela sociedade contemporânea à luz das explicações científicas provindas do referencial biomédico e tecnológico. As formas de se olhar e cientificizar o corpo, a autogestão da saúde e o determinismo biológico, em contexto marcado pela somatização e pela exteriorização, são as principais temáticas abordadas. Esse cenário teórico, desenvolvido com rigor e profundidade pelos autores, leva a questionar e refletir como tais aspectos atravessam a área da Educação Física.

  19. Un multi-outil adapté au parcours cognitif de l’étudiant en traduction spécialisée : application à la biomédecine

    Directory of Open Access Journals (Sweden)

    Sylvie Boudreau

    2007-01-01

    Full Text Available Le site BiomeTTico vise à répondre aux difficultés soulevées par l’apprentissage de la traduction spécialisée (biomédecine. Il s’agit d’un multi-outil informatique d’aide à l’enseignement de la traduction biomédicale au baccalauréat et aux cycles supérieurs, conçu en fonction d’une approche cognitive de l’apprentissage et de la pratique de la traduction. Prenant en compte différentes catégories d’utilisateurs, il se veut également une plate-forme de valorisation des travaux de recherche, notamment au 2e et au 3ecycle, et, dans une certaine mesure, un site de référence pour les traducteurs professionnels. L’organisation du site est fondée sur des principes d’utilisabilité, d’interactivité et de participation collaborative au contenu, adaptés à un contexte pédagogique. Il intègre différents produits de la recherche menée ces dernières années et il est appelé à évoluer dans le temps. Bien que son contenu soit spécifique à la biomédecine, sa structure est réutilisable dans d’autres contextes d’enseignement de la traduction.

  20. Physiology of Saccharomyces cerevisiae strains isolated from Brazilian biomes: new insights into biodiversity and industrial applications

    DEFF Research Database (Denmark)

    Beato, Felipe B.; Bergdahl, Basti; Rosa, Carlos A.

    2016-01-01

    growth rate on sucrose (0.57 ± 0.02 h-1), high ethanol yield (1.65 ± 0.02 mol ethanol mol hexose equivalent-1), high ethanol productivity (0.19 ± 0.00 mol L-1 h-1), high tolerance to acetic acid (10 g L(-1)) and to high temperature (40°C). Strain UFMG-CM-Y260 displayed high ethanol yield (1.67 ± 0.13 mol...... ethanol mol hexose equivalent-1), high tolerance to ethanol and to low pH, a trait which is important for non-aseptic industrial processes. Strain UFMG-CM-Y267 showed high tolerance to acetic acid and to high temperature (40°C), which is of particular interest to second generation industrial processes....