Climatic and management drivers of CO2 exchanges by a production crop: analysis over three successive 4-year cycles.

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Buysse, Pauline; Moureaux, Christine; Bodson, Bernard; Aubinet, Marc

2016-04-01

Carbon dioxide (CO2) exchanges between crops and the atmosphere are influenced by both climatic and crop management drivers. The investigated crop, situated at the Lonzée Terrestrial Observatory (candidate ICOS site) in the Hesbaye region in Belgium and managed for more than 70 years using conventional farming practices, was monitored over three complete sugar beet/winter wheat/potato/winter wheat rotation cycles from 2004 to 2016. Eddy covariance, automatic and manual soil chambers, leaf diffusion and biomass measurements were performed continuously in order to obtain the daily and seasonal Net Ecosystem Exchange (NEE), Gross Primary Productivity (GPP), total Ecosystem Respiration (TER), Net Primary Productivity (NPP), autotrophic respiration, heterotrophic respiration and Net Biome Production (NBP). Meteorological data and crop management practices were also recorded. Climatic and seasonal evolutions of the carbon balance components were studied and crop carbon budgets were computed both at the yearly and crop rotation cycle scales. On average over the 12 years, NEE was negative but NBP was positive, i.e. as far as carbon exportation by harvest are included in the budget, the site behaved as a carbon source. Impacts of both meteorological drivers and crop management operations on CO2 exchanges were analyzed and compared between crop types, years, and rotation cycles. The uncertainties associated to the carbon fluxes were also evaluated and discussed.

Unraveling net carbon exchange into its component processes of photosynthesis and respiration

Science.gov (United States)

Ballantyne, A.

2017-12-01

The recent `warming hiatus' presents an excellent opportunity to investigate climate sensitivity of carbon cycle processes. Herewe combine satellite and atmospheric observations to show that the rate of net biome productivity (NBP) has significantlyaccelerated from 0.007+/-0.065 PgC yr-2 over the warming period (1982 to 1998) to 0.119+/-0.071 PgC yr-2 over thewarminghiatus (1998-2012). This acceleration in NBP is not due to increased primary productivity, but rather reduced respiration thatis correlated (r2 0.58; P = 0.0007) and sensitive ( gamma= 4.05 to 9.40 PgC yr-1 per deg C) to land temperatures. Global landmodels do not fully capture this apparent reduced respiration over the warming hiatus; however, an empirical model includingsoil temperature and moisture observations seems to better captures the reduced respiration.

Interaction between Nbp35 and Cfd1 proteins of cytosolic Fe-S cluster assembly reveals a stable complex formation in Entamoeba histolytica.

Directory of Open Access Journals (Sweden)

Shadab Anwar

Full Text Available Iron-Sulfur (Fe-S proteins are involved in many biological functions such as electron transport, photosynthesis, regulation of gene expression and enzymatic activities. Biosynthesis and transfer of Fe-S clusters depend on Fe-S clusters assembly processes such as ISC, SUF, NIF, and CIA systems. Unlike other eukaryotes which possess ISC and CIA systems, amitochondriate Entamoeba histolytica has retained NIF & CIA systems for Fe-S cluster assembly in the cytosol. In the present study, we have elucidated interaction between two proteins of E. histolytica CIA system, Cytosolic Fe-S cluster deficient 1 (Cfd1 protein and Nucleotide binding protein 35 (Nbp35. In-silico analysis showed that structural regions ranging from amino acid residues (P33-K35, G131-V135 and I147-E151 of Nbp35 and (G5-V6, M34-D39 and G46-A52 of Cfd1 are involved in the formation of protein-protein complex. Furthermore, Molecular dynamic (MD simulations study suggested that hydrophobic forces surpass over hydrophilic forces between Nbp35 and Cfd1 and Van-der-Waal interaction plays crucial role in the formation of stable complex. Both proteins were separately cloned, expressed as recombinant fusion proteins in E. coli and purified to homogeneity by affinity column chromatography. Physical interaction between Nbp35 and Cfd1 proteins was confirmed in vitro by co-purification of recombinant Nbp35 with thrombin digested Cfd1 and in vivo by pull down assay and immunoprecipitation. The insilico, in vitro as well as in vivo results prove a stable interaction between these two proteins, supporting the possibility of its involvement in Fe-S cluster transfer to target apo-proteins through CIA machinery in E. histolytica. Our study indicates that initial synthesis of a Fe-S precursor in mitochondria is not necessary for the formation of Cfd1-Nbp35 complex. Thus, Cfd1 and Nbp35 with the help of cytosolic NifS and NifU proteins can participate in the maturation of non-mitosomal Fe-S proteins

European land CO2 sink influenced by NAO and East-Atlantic Pattern coupling

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Bastos, Ana; Janssens, Ivan A.; Gouveia, Célia M.; Trigo, Ricardo M.; Ciais, Philippe; Chevallier, Frédéric; Peñuelas, Josep; Rödenbeck, Christian; Piao, Shilong; Friedlingstein, Pierre; Running, Steven W.

2016-01-01

Large-scale climate patterns control variability in the global carbon sink. In Europe, the North-Atlantic Oscillation (NAO) influences vegetation activity, however the East-Atlantic (EA) pattern is known to modulate NAO strength and location. Using observation-driven and modelled data sets, we show that multi-annual variability patterns of European Net Biome Productivity (NBP) are linked to anomalies in heat and water transport controlled by the NAO–EA interplay. Enhanced NBP occurs when NAO and EA are both in negative phase, associated with cool summers with wet soils which enhance photosynthesis. During anti-phase periods, NBP is reduced through distinct impacts of climate anomalies in photosynthesis and respiration. The predominance of anti-phase years in the early 2000s may explain the European-wide reduction of carbon uptake during this period, reported in previous studies. Results show that improving the capability of simulating atmospheric circulation patterns may better constrain regional carbon sink variability in coupled carbon-climate models. PMID:26777730

Accelerating Net Terrestrial Carbon Uptake During the Warming Hiatus Due to Reduced Respiration

Science.gov (United States)

Ballantyne, Ashley; Smith, William; Anderegg, William; Kauppi, Pekka; Sarmiento, Jorge; Tans, Pieter; Shevliakova, Elena; Pan, Yude; Poulter, Benjamin; Anav, Alessandro;

Climate-biomes, pedo-biomes and pyro-biomes: which world view explains the tropical forest - savanna boundary in South America?

Science.gov (United States)

Langan, Liam; Higgins, Steven; Scheiter, Simon

2015-04-01

Elucidating the drivers of broad vegetation formations improves our understanding of earth system functioning. The biome, defined primarily by the dominance of a particular growth strategy, is commonly employed to group vegetation into similar units. Predicting tropical forest and savanna biome boundaries in South America has proven difficult. Process based DGVMs (Dynamic global vegetation models) are our best tool to simulate vegetation patterns, make predictions for future changes and test theory, however, many DGVMs fail to accurately simulate the spatial distribution or indeed presence of the South American savanna biome which can result in large differences in modelled ecosystem structural properties. Evidence suggests fire plays a significant role in mediating these forest and savanna biome boundaries, however, fire alone does not appear to be sufficient to predict these boundaries in South America using DGVMs hinting at the presence of one or more missing environmental factors. We hypothesise that soil depth, which affects plant available water by determining maximum storage potential and influences temporal availability, may be one of these missing environmental factors. To test our hypothesis we use a novel vegetation model, the aDGVM2. This model has been specifically designed to allow plant trait strategies, constrained by trade-offs between traits, evolve based on the abiotic and biotic conditions where the resulting community trait suites are emergent properties of model dynamics. Furthermore it considers root biomass in multiple soil layers and therefore allows the consideration of alternative rooting strategies, which in turn allows us to explore in more detail the role of soil hydraulic factors in controlling biome boundary distributions. We find that changes in soil depth, interacting with fire, affect the relative dominance of tree and grass strategies and thus the presence and spatial distribution of forest and savanna biomes in South America

[Parameter sensitivity of simulating net primary productivity of Larix olgensis forest based on BIOME-BGC model].

Science.gov (United States)

He, Li-hong; Wang, Hai-yan; Lei, Xiang-dong

2016-02-01

Model based on vegetation ecophysiological process contains many parameters, and reasonable parameter values will greatly improve simulation ability. Sensitivity analysis, as an important method to screen out the sensitive parameters, can comprehensively analyze how model parameters affect the simulation results. In this paper, we conducted parameter sensitivity analysis of BIOME-BGC model with a case study of simulating net primary productivity (NPP) of Larix olgensis forest in Wangqing, Jilin Province. First, with the contrastive analysis between field measurement data and the simulation results, we tested the BIOME-BGC model' s capability of simulating the NPP of L. olgensis forest. Then, Morris and EFAST sensitivity methods were used to screen the sensitive parameters that had strong influence on NPP. On this basis, we also quantitatively estimated the sensitivity of the screened parameters, and calculated the global, the first-order and the second-order sensitivity indices. The results showed that the BIOME-BGC model could well simulate the NPP of L. olgensis forest in the sample plot. The Morris sensitivity method provided a reliable parameter sensitivity analysis result under the condition of a relatively small sample size. The EFAST sensitivity method could quantitatively measure the impact of simulation result of a single parameter as well as the interaction between the parameters in BIOME-BGC model. The influential sensitive parameters for L. olgensis forest NPP were new stem carbon to new leaf carbon allocation and leaf carbon to nitrogen ratio, the effect of their interaction was significantly greater than the other parameter' teraction effect.

Biomes computed from simulated climatologies

Energy Technology Data Exchange (ETDEWEB)

Claussen, M.; Esch, M. [Max-Planck-Institut fuer Meteorologie, Hamburg (Germany)

1994-01-01

The biome model of Prentice et al. is used to predict global patterns of potential natural plant formations, or biomes, from climatologies simulated by ECHAM, a model used for climate simulations at the Max-Planck-Institut fuer Meteorologie. This study undertaken in order to show the advantage of this biome model in diagnosing the performance of a climate model and assessing effects of past and future climate changes predicted by a climate model. Good overall agreement is found between global patterns of biomes computed from observed and simulated data of present climate. But there are also major discrepancies indicated by a difference in biomes in Australia, in the Kalahari Desert, and in the Middle West of North America. These discrepancies can be traced back to in simulated rainfall as well as summer or winter temperatures. Global patterns of biomes computed from an ice age simulation reveal that North America, Europe, and Siberia should have been covered largely by tundra and taiga, whereas only small differences are for the tropical rain forests. A potential northeast shift of biomes is expected from a simulation with enhanced CO{sub 2} concentration according to the IPCC Scenario A. Little change is seen in the tropical rain forest and the Sahara. Since the biome model used is not capable of predicting chances in vegetation patterns due to a rapid climate change, the latter simulation to be taken as a prediction of chances in conditions favourable for the existence of certain biomes, not as a reduction of a future distribution of biomes. 15 refs., 8 figs., 2 tabs.

Improving the spectrophotometric determination of the alkylating activity of anticancer agents: a new insight into the mechanism of the NBP method.

Science.gov (United States)

Dierickx, Karen M E; Journé, Fabrice; Gerbaux, Pascal; Morandini, Renato; Kauffmann, Jean-Michel; Ghanem, Ghanem E

2009-02-15

In this paper, the mechanism of the nitrobenzylpyridine (NBP) method to measure the alkylating activity of drugs originally described by Epstein et al. [J. Epstein, R.W. Rosenthal, R.J. Ess, Anal. Chem. 27 (1955) 1435-1439] and modified later by others was revisited using melphalan, m-sarcolysin, chlorambucil, cyclophosphamide and ifosfamide. Its direct application to determine the activity of these drugs in human serum and aqueous media is described and discussed. This method, based on the formation of a chromophore due to the reaction between the alkylating agent and NBP, was significantly improved by extracting as quickly as possible the reaction product(s) into chloroform before adding alkali to develop the color. This significantly limited the degradation by hydrolysis of the products and enhanced the yield of the end chromophore in the organic phase. The reaction time was optimized by monitoring each compound color development. The best reaction time for each compound was selected and a higher stability of the extracted color over at least 1h was obtained (compared to a couple of minutes in previous studies). Most interestingly, water evaporation due to heating had little or no effect on the linearity of standard curves evaluated in the micromolar concentration range. Both the sensitivity and reproducibility of the method were therefore significantly improved. There appears to be a direct correlation between compound hydrolysis and alkylation activity; the relative reactivity is different among the compounds owing to the rate of (i) production, (ii) the relative proportions and (iii) the hydrolysis of the intermediates. A general mechanism for the nucleophilic competitive substitution is proposed.

Biomes computed from simulated climatologies

Energy Technology Data Exchange (ETDEWEB)

Claussen, W.; Esch, M.

1992-09-01

The biome model of Prentice et al. is used to predict global patterns of potential natural plant formations, or biomes, from climatologies simulated by ECHAM, a model used for climate simulations at the Max-Planck-Institut fuer Meteorologie. This study is undertaken in order to show the advantage of this biome model in comprehensively diagnosing the performance of a climate model and assessing effects of past and future climate changes predicted by a climate model. Good overall agreement is found between global patterns of biomes computed from observed and simulated data of present climate. But there are also major discrepancies indicated by a difference in biomes in Australia, in the Kalahari Desert, and in the Middle West of North America. These discrepancies can be traced back to failures in simulated rain fall as well as summer or winter temperatures. Global patterns of biomes computed from an ice age simulation reveal that North America, Europe, and Siberia should have been covered largely by tundra and taiga, whereas only small differences are seen for the tropical rain forests. A potential North-East shift of biomes is expected from a simulation with enhanced CO{sub 2} concentration according to the IPCC Scenario A. Little change is seen in the tropical rain forest and the Sahara. Since the biome model used is not capable of predicting changes in vegetation patterns due to a rapid climate change, the latter simulation has to be taken as a prediction of changes in conditions favorable for the existence of certain biomes, not as a prediction of a future distribution of biomes. (orig.).

Evolution of the indoor biome.

Science.gov (United States)

Martin, Laura J; Adams, Rachel I; Bateman, Ashley; Bik, Holly M; Hawks, John; Hird, Sarah M; Hughes, David; Kembel, Steven W; Kinney, Kerry; Kolokotronis, Sergios-Orestis; Levy, Gabriel; McClain, Craig; Meadow, James F; Medina, Raul F; Mhuireach, Gwynne; Moreau, Corrie S; Munshi-South, Jason; Nichols, Lauren M; Palmer, Clare; Popova, Laura; Schal, Coby; Täubel, Martin; Trautwein, Michelle; Ugalde, Juan A; Dunn, Robert R

2015-04-01

Few biologists have studied the evolutionary processes at work in indoor environments. Yet indoor environments comprise approximately 0.5% of ice-free land area--an area as large as the subtropical coniferous forest biome. Here we review the emerging subfield of 'indoor biome' studies. After defining the indoor biome and tracing its deep history, we discuss some of its evolutionary dimensions. We restrict our examples to the species found in human houses--a subset of the environments constituting the indoor biome--and offer preliminary hypotheses to advance the study of indoor evolution. Studies of the indoor biome are situated at the intersection of evolutionary ecology, anthropology, architecture, and human ecology and are well suited for citizen science projects, public outreach, and large-scale international collaborations. Copyright © 2015 Elsevier Ltd. All rights reserved.

Disturbance maintains alternative biome states.

Science.gov (United States)

Dantas, Vinícius de L; Hirota, Marina; Oliveira, Rafael S; Pausas, Juli G

2016-01-01

Understanding the mechanisms controlling the distribution of biomes remains a challenge. Although tropical biome distribution has traditionally been explained by climate and soil, contrasting vegetation types often occur as mosaics with sharp boundaries under very similar environmental conditions. While evidence suggests that these biomes are alternative states, empirical broad-scale support to this hypothesis is still lacking. Using community-level field data and a novel resource-niche overlap approach, we show that, for a wide range of environmental conditions, fire feedbacks maintain savannas and forests as alternative biome states in both the Neotropics and the Afrotropics. In addition, wooded grasslands and savannas occurred as alternative grassy states in the Afrotropics, depending on the relative importance of fire and herbivory feedbacks. These results are consistent with landscape scale evidence and suggest that disturbance is a general factor driving and maintaining alternative biome states and vegetation mosaics in the tropics. © 2015 John Wiley & Sons Ltd/CNRS.

Phylogenetic biome conservatism on a global scale.

Science.gov (United States)

Crisp, Michael D; Arroyo, Mary T K; Cook, Lyn G; Gandolfo, Maria A; Jordan, Gregory J; McGlone, Matt S; Weston, Peter H; Westoby, Mark; Wilf, Peter; Linder, H Peter

2009-04-09

How and why organisms are distributed as they are has long intrigued evolutionary biologists. The tendency for species to retain their ancestral ecology has been demonstrated in distributions on local and regional scales, but the extent of ecological conservatism over tens of millions of years and across continents has not been assessed. Here we show that biome stasis at speciation has outweighed biome shifts by a ratio of more than 25:1, by inferring ancestral biomes for an ecologically diverse sample of more than 11,000 plant species from around the Southern Hemisphere. Stasis was also prevalent in transocean colonizations. Availability of a suitable biome could have substantially influenced which lineages establish on more than one landmass, in addition to the influence of the rarity of the dispersal events themselves. Conversely, the taxonomic composition of biomes has probably been strongly influenced by the rarity of species' transitions between biomes. This study has implications for the future because if clades have inherently limited capacity to shift biomes, then their evolutionary potential could be strongly compromised by biome contraction as climate changes.

Ocean-Ice-Atmosphere Interactions off Sabrina and Adelie Coasts During NBP1402 and AU1402

Science.gov (United States)

Orsi, A. H.; Zielinski, N. J.; Webb, C.; Huber, B. A.

2015-12-01

Diverse interactions of winds, currents and ice around Antarctica dictate how, where and when the world's densest waters form, massive floating ice shelves and glaciers melt, gases are exchanged at the sea surface, and primary productivity. Compelled by recent rate estimates of East Antarctic Ice Sheet mass loss, we contrast the paths and mixing histories of oceanic waters reaching the continental ice edge off the Sabrina and Adelie coasts relying on a the first synoptic shipboard measurements made by U.S. (NBP1402) and Australian (AU1402) scientists. Analysis of historical hydrography and sea ice concentration fields within the Mertz Polynya indicates the apparent effect of evolving ocean-ice- atmosphere interactions on the characteristics of local Shelf Water (SW) sources. A polynya dominated water mass structure similar to that observed off the Adelie Coast before the removal of the Mertz Ice Tongue was expected to the west of the Dalton Ice Tongue (DIT). However, there was no evidence of dense SW off Sabrina Coast during both summer cruises of 2014 and 2015, thus lessening the region's preconceived influence to global meridional overturning. Present sea ice production within the eastern Dalton Polynya is overshadowed by freshwater input to relatively stable interior upper waters. The Antarctic Coastal Current (ACoC) picks up distinct meltwater contributions along the DIT western flank and in front of the Moscow University Ice Shelf (MUIS) and Totten Glacier (TG). Unlike over other highly influential margins to global sea level rise, the main evidence of inflow and mixing of relatively warm oceanic waters is reduced to relatively cold thermocline water (< 0.3°C) from the continental slope. This source water enters the eastern trough off Sabrina Coast and is swiftly steered poleward by complex underlying topography. Meltwater export from beneath the MUIS and TG is observed at newly discovered trenches that effectively constrain sub-cavity inflow to low salinity

Seeking potential contributions to future carbon budget in conterminous US forests considering disturbances

Science.gov (United States)

Zhang, Fangmin; Pan, Yude; Birdsey, Richard A.; Chen, Jing M.; Dugan, Alexa

2017-11-01

Currently, US forests constitute a large carbon sink, comprising about 9 % of the global terrestrial carbon sink. Wildfire is the most significant disturbance influencing carbon dynamics in US forests. Our objective is to estimate impacts of climate change, CO2 concentration, and nitrogen deposition on the future net biome productivity (NBP) of US forests until the end of twenty-first century under a range of disturbance conditions. We designate three forest disturbance scenarios under one future climate scenario to evaluate factor impacts for the future period (2011-2100): (1) no wildfires occur but forests continue to age (Saging), (2) no wildfires occur and forest ages are fixed in 2010 (Sfixed_nodis), and (3) wildfires occur according to a historical pattern, consequently changing forest age (Sdis_age_change). Results indicate that US forests remain a large carbon sink in the late twenty-first century under the Sfixed_nodis scenario; however, they become a carbon source under the Saging and Sdis_age_change scenarios. During the period of 2011 to 2100, climate is projected to have a small direct effect on NBP, while atmospheric CO2 concentration and nitrogen deposition have large positive effects on NBP regardless of the future climate and disturbance scenarios. Meanwhile, responses to past disturbances under the Sfixed_nodis scenario increase NBP regardless of the future climate scenarios. Although disturbance effects on NBP under the Saging and Sdis_age_change scenarios decrease with time, both scenarios experience an increase in NBP prior to the 2050s and then a decrease in NBP until the end of the twenty-first century. This study indicates that there is potential to increase or at least maintain the carbon sink of conterminous US forests at the current level if future wildfires are reduced and age structures are maintained at a productive mix. The effects of CO2 on the future carbon sink may overwhelm effects of other factors at the end of the twenty

Calibration of a biome-biogeochemical cycles model for modeling the net primary production of teak forests through inverse modeling of remotely sensed data

Science.gov (United States)

Imvitthaya, Chomchid; Honda, Kiyoshi; Lertlum, Surat; Tangtham, Nipon

2011-01-01

In this paper, we present the results of a net primary production (NPP) modeling of teak (Tectona grandis Lin F.), an important species in tropical deciduous forests. The biome-biogeochemical cycles or Biome-BGC model was calibrated to estimate net NPP through the inverse modeling approach. A genetic algorithm (GA) was linked with Biome-BGC to determine the optimal ecophysiological model parameters. The Biome-BGC was calibrated by adjusting the ecophysiological model parameters to fit the simulated LAI to the satellite LAI (SPOT-Vegetation), and the best fitness confirmed the high accuracy of generated ecophysioligical parameter from GA. The modeled NPP, using optimized parameters from GA as input data, was evaluated using daily NPP derived by the MODIS satellite and the annual field data in northern Thailand. The results showed that NPP obtained using the optimized ecophysiological parameters were more accurate than those obtained using default literature parameterization. This improvement occurred mainly because the model's optimized parameters reduced the bias by reducing systematic underestimation in the model. These Biome-BGC results can be effectively applied in teak forests in tropical areas. The study proposes a more effective method of using GA to determine ecophysiological parameters at the site level and represents a first step toward the analysis of the carbon budget of teak plantations at the regional scale.

A Changing Number of Alternative States in the Boreal Biome: Reproducibility Risks of Replacing Remote Sensing Products.

Science.gov (United States)

Xu, Chi; Holmgren, Milena; Van Nes, Egbert H; Hirota, Marina; Chapin, F Stuart; Scheffer, Marten

2015-01-01

Publicly available remote sensing products have boosted science in many ways. The openness of these data sources suggests high reproducibility. However, as we show here, results may be specific to versions of the data products that can become unavailable as new versions are posted. We focus on remotely-sensed tree cover. Recent studies have used this public resource to detect multi-modality in tree cover in the tropical and boreal biomes. Such patterns suggest alternative stable states separated by critical tipping points. This has important implications for the potential response of these ecosystems to global climate change. For the boreal region, four distinct ecosystem states (i.e., treeless, sparse and dense woodland, and boreal forest) were previously identified by using the Collection 3 data of MODIS Vegetation Continuous Fields (VCF). Since then, the MODIS VCF product has been updated to Collection 5; and a Landsat VCF product of global tree cover at a fine spatial resolution of 30 meters has been developed. Here we compare these different remote-sensing products of tree cover to show that identification of alternative stable states in the boreal biome partly depends on the data source used. The updated MODIS data and the newer Landsat data consistently demonstrate three distinct modes around similar tree-cover values. Our analysis suggests that the boreal region has three modes: one sparsely vegetated state (treeless), one distinct 'savanna-like' state and one forest state, which could be alternative stable states. Our analysis illustrates that qualitative outcomes of studies may change fundamentally as new versions of remote sensing products are used. Scientific reproducibility thus requires that old versions remain publicly available.

Biomes.

Science.gov (United States)

Web Feet K-8, 2001

2001-01-01

This annotated subject guide to Web sites and additional resources focuses on biomes. Specifies age levels for resources that include Web sites, CD-ROMs and software, videos, books, audios, and magazines; includes professional resources; and presents a relevant class activity. (LRW)

Inferring biome-scale net primary productivity from tree-ring isotopes

Science.gov (United States)

Pederson, N.; Levesque, M.; Williams, A. P.; Hobi, M. L.; Smith, W. K.; Andreu-Hayles, L.

2017-12-01

Satellite estimates of vegetation growth (net primary productivity; NPP), tree-ring records, and forest inventories indicate that ongoing climate change and rising atmospheric CO2 concentration are altering productivity and carbon storage of forests worldwide. The impact of global change on the trends of NPP, however, remain unknown because of the lack of long-term high-resolution NPP data. For the first time, we tested if annually resolved carbon (δ13C) and oxygen (δ18O) stable isotopes from the cellulose of tree rings from trees in temperate regions could be used as a tool for inferring NPP across spatiotemporal scales. We compared satellite NPP estimates from the moderate-resolution imaging spectroradiometer sensor (MODIS, product MOD17A) and a newly developed global NPP dataset derived from the Global Inventory Modeling and Mapping Studies (GIMMS) dataset to annually resolved tree-ring width and δ13C and δ18O records from four sites along a hydroclimatic gradient in Eastern and Central United States. We found strong correlations across large geographical regions between satellite-derived NPP and tree-ring isotopes that ranged from -0.40 to -0.91. Notably, tree-ring derived δ18O had the strongest relation to climate. The results were consistent among the studied tree species (Quercus rubra and Liriodendron tulipifera) and along the hydroclimatic conditions of our network. Our study indicates that tree-ring isotopes can potentially be used to reconstruct NPP in time and space. As such, our findings represent an important breakthrough for estimating long-term changes in vegetation productivity at the biome scale.

Remotely sensed phenology for mapping biomes and vegetation functional types

CSIR Research Space (South Africa)

Wessels, Konrad J

2009-07-01

Full Text Available clearly captured in Fig. 3. The majority of the pixels in the Savanna have a start of growing season in late October, midposition in February and end in June (Fig. 3). In contrast, the winter rainfall Succulent Karoo have a start of growing season... initially split the biomes based on vegetation production and then by the seasonality of growth IV - 1035 (Fig. 4). The three arid biomes (Desert, Succulent and Nama Figure 3. Frequency histograms of the mean START, midposition (MID) and END date...

On coupling global biome models with climate models

International Nuclear Information System (INIS)

Claussen, M.

1994-01-01

The BIOME model of Prentice et al. (1992), which predicts global vegetation patterns in equilibrium with climate, is coupled with the ECHAM climate model of the Max-Planck-Institut fuer Meteorologie, Hamburg. It is found that incorporation of the BIOME model into ECHAM, regardless at which frequency, does not enhance the simulated climate variability, expressed in terms of differences between global vegetation patterns. Strongest changes are seen only between the initial biome distribution and the biome distribution computed after the first simulation period, provided that the climate-biome model is started from a biome distribution that resembles the present-day distribution. After the first simulation period, there is no significant shrinking, expanding, or shifting of biomes. Likewise, no trend is seen in global averages of land-surface parameters and climate variables. (orig.)

Terrestrial ecology. Comprehensive study of the grassland biome

International Nuclear Information System (INIS)

Anon.

1976-01-01

Terrestrial ecology and grassland biome studies are designed to characterize the biota of the Hanford Reservation, elucidate seasonal dynamics of plant productivity, decomposition and mineral behavior patterns of important plant communities, and, to study the response of these communities to important natural environmental stresses, such as weather, wildfire and man-induced alterations of communities (influenced by grazing cattle and severe mechanical disturbance of the soil, such as affected by plowing or burial of waste materials or construction activities). A detailed account of the important findings of a 5-yr study is currently being prepared by the terrestrial ecology section staff for publication as a contribution to the International Biological Program Grassland Biome project

On the Revealing Firsthand Probing of Ocean-Ice-Atmosphere Interactions off Sabrina Coast During NBP1402

Science.gov (United States)

Huber, B. A.; Orsi, A. H.; Zielinski, N. J.; Durkin, W. J., IV; Clark, P.; Wiederwohl, C. L.; Rosenberg, M. A.; Gwyther, D.; Greenbaum, J. S.; Lavoie, C.; Shevenell, A.; Leventer, A.; Blankenship, D. D.; Gulick, S. P. S.; Domack, E. W.

2014-12-01

Diverse interactions of winds, currents and ice around Antarctica dictate how, where and when the world's densest waters form and massive floating ice shelves and glaciers melt, as well as control sea surface gas exchange and primary productivity. Compelled by recent rate estimates of East Antarctic Ice Sheet mass loss, we contrast the paths and mixing histories of oceanic waters reaching the continental ice edge off the Sabrina and Adelie coasts relying on the unique set of synoptic shipboard measurements from NBP1402 (swath bathymetry, ADCP, underway CTD). Analysis of historical hydrography and sea ice concentration fields within the Mertz Polynya indicates the apparent effect of evolving ocean-ice-atmosphere interactions on the characteristics of local Shelf Water (SW) sources to current outflow of newly formed Antarctic Bottom Water (AABW). A polynya dominated water mass structure similar to that observed off the Adelie Coast before the removal of the Mertz Ice Tongue was expected to the west of the Dalton Ice Tongue (DIT). However, we found no evidence of dense SW off Sabrina Coast, which may lessen the region's preconceived influence to global meridional overturning. Present sea ice production within the eastern Dalton Polynya is overshadowed by freshwater input to relatively stable interior upper waters. The Antarctic Coastal Current (ACoC) picks up distinct meltwater contributions along the DIT western flank and in front of the Moscow University Ice Shelf (MUIS) and Totten Glacier (TG). Unlike over other highly influential margins to global sea level rise, there is no evidence of local cross-shelf inflow and mixing of warm Circumpolar Deep Water. Relatively cold thermocline waters from the continental slope enter the eastern trough off Sabrina Coast, and they are swiftly steered poleward by complex underlying topography. Meltwater export from beneath the MUIS and TG is observed at newly discovered trenches that effectively constrain sub-cavity inflow to low

Mid-wavelength infrared unipolar nBp superlattice photodetector

Science.gov (United States)

Kazemi, Alireza; Myers, Stephen; Taghipour, Zahra; Mathews, Sen; Schuler-Sandy, Ted; Lee, Seunghyun; Cowan, Vincent M.; Garduno, Eli; Steenbergen, Elizabeth; Morath, Christian; Ariyawansa, Gamini; Scheihing, John; Krishna, Sanjay

2018-01-01

We report a Mid-Wavelength Infrared (MWIR) barrier photodetector based on the InAs/GaSb/AlSb type-II superlattice (T2SL) material system. The nBp design consists of a single unipolar barrier (InAs/AlSb SL) placed between a 4 μm thick p-doped absorber (InAs/GaSb SL) and an n-type contact layer (InAs/GaSb SL). At 80 K, the device exhibited a 50% cut-off wavelength of 5 μm, was fully turned-ON at zero bias and the measured QE was 50% (front side illumination with no AR coating) at 4.5 μm with a dark current density of 4.7 × 10-6 A/cm2 at Vb = 50 mV. At 150 K and Vb = 50 mV, the 50% cut-off wavelength increased to 5.3 μm, and the QE was 54% at 4.5 μm with a dark current of 5.0 × 10-4 A/cm2.

Carbon budget over 12 years in a production crop under temperate climate

Science.gov (United States)

Buysse, Pauline; Bodson, Bernard; Debacq, Alain; De Ligne, Anne; Heinesch, Bernard; Manise, Tanguy; Moureaux, Christine; Aubinet, Marc

2017-04-01

Carbon dioxide (CO2) exchanges between crops and the atmosphere are influenced by both climatic and crop management drivers. The investigated crop, situated at the Lonzée Terrestrial Observatory (LTO, candidate ICOS site) in Belgium and managed for more than 70 years using conventional farming practices, was monitored over three complete sugar beet (or maize)/winter wheat/potato/winter wheat rotation cycles from 2004 to 2016. Continuous eddy-covariance measurements and regular biomass samplings were performed in order to obtain the daily and seasonal Net Ecosystem Exchange (NEE), Gross Primary Productivity, Total Ecosystem Respiration, Net Primary Productivity, and Net Biome Production (NBP). Meteorological data and crop management practices were also recorded. The main objectives were to analyze the CO2 flux responses to climatic drivers and to establish the C budget of the cropland. Crop type significantly influenced the measured CO2 fluxes. In addition to crop season duration, which had an obvious impact on cumulated NEE values for each crop type, the CO2 flux response to photosynthetic photon flux density, vapor pressure deficit and temperature differed between crop types, while no significant response to soil water content was observed in any of them. Besides, a significant positive relationship between crop residue amount and ecosystem respiration was observed. Over the 12 years, NEE was negative (-4.34 ± 0.21 kg C m-2) but NBP was positive (1.05 ± 0.30 kg C m-2), i.e. as soon as all lateral carbon fluxes - dominated by carbon exportation - are included in the budget, the site behaves as a carbon source. Intercrops were seen to play a major role in the carbon budget, being mostly due to the long time period it represented (59 % of the 12 year time period). An in-depth analysis of intercrop periods and, more specifically, growing cover crops (mustard in the case of our study), is developed in a companion poster (ref. abstract EGU2017-12216, session SSS9

Forest carbon emissions from cropland expansion in the Brazilian Cerrado biome

Science.gov (United States)

Noojipady, Praveen; Morton, C. Douglas; Macedo, N. Marcia; Victoria, C. Daniel; Huang, Chengquan; Gibbs, K. Holly; Edson Bolfe, L.

2017-02-01

Land use, land use change, and forestry accounted for two-thirds of Brazil’s greenhouse gas emissions profile in 2005. Amazon deforestation has declined by more than 80% over the past decade, yet Brazil’s forests extend beyond the Amazon biome. Rapid expansion of cropland in the neighboring Cerrado biome has the potential to undermine climate mitigation efforts if emissions from dry forest and woodland conversion negate some of the benefits of avoided Amazon deforestation. Here, we used satellite data on cropland expansion, forest cover, and vegetation carbon stocks to estimate annual gross forest carbon emissions from cropland expansion in the Cerrado biome. Nearly half of the Cerrado met Brazil’s definition of forest cover in 2000 (≥0.5 ha with ≥10% canopy cover). In areas of established crop production, conversion of both forest and non-forest Cerrado formations for cropland declined during 2003-2013. However, forest carbon emissions from cropland expansion increased over the past decade in Matopiba, a new frontier of agricultural production that includes portions of Maranhão, Tocantins, Piauí, and Bahia states. Gross carbon emissions from cropland expansion in the Cerrado averaged 16.28 Tg C yr-1 between 2003 and 2013, with forest-to-cropland conversion accounting for 29% of emissions. The fraction of forest carbon emissions from Matopiba was much higher; between 2010-2013, large-scale cropland conversion in Matopiba contributed 45% of total Cerrado forest carbon emissions. Carbon emissions from Cerrado-to-cropland transitions offset 5%-7% of the avoided emissions from reduced Amazon deforestation rates during 2011-2013. Comprehensive national estimates of forest carbon fluxes, including all biomes, are critical to detect cross-biome leakage within countries and achieve climate mitigation targets to reduce emissions from land use, land use change, and forestry.

Testing the applicability of BIOME-BGC to simulate beech gross primary production in Europe using a new continental weather dataset

DEFF Research Database (Denmark)

Chiesi, Marta; Chirici, Gherardo; Marchetti, Marco

2016-01-01

A daily 1-km Pan-European weather dataset can drive the BIOME-BGC model for the estimation of current and future beech gross primary production (GPP). Annual beech GPP is affected primarily by spring temperature and more irregularly by summer water stress.The spread of beech forests in Europe...... forest ecosystems having different climatic conditions where the eddy covariance technique is used to measure water and carbon fluxes. The experiment is in three main steps. First, the accuracy of BIOME-BGC GPP simulations is assessed through comparison with flux observations. Second, the influence...... of two major meteorological drivers (spring minimum temperature and growing season dryness) on observed and simulated inter-annual GPP variations is analysed. Lastly, the impacts of two climate change scenarios on beech GPP are evaluated through statistical analyses of the ground data and model...

Description of the Karoo Biome project

CSIR Research Space (South Africa)

Cowling, RM

1986-01-01

Full Text Available The ecological characteristics and ecological problems of the karoo biome are briefly described. A conceptual basis and guidelines for the development of the Karoo Biome Project are outlined by addressing project goals, project structure...

Description of the Grassland Biome Project

CSIR Research Space (South Africa)

Mentis, MT

1982-10-01

Full Text Available The objectives, organization and research programme of the Grassland Biome Project are described against a background of the biome's ecological characteristics and environmental problems. Four principal research topics wil 1 be focused upon: (i...

BOREAS RSS-8 BIOME-BGC Model Simulations at Tower Flux Sites in 1994

Science.gov (United States)

Hall, Forrest G. (Editor); Nickeson, Jaime (Editor); Kimball, John

2000-01-01

BIOME-BGC is a general ecosystem process model designed to simulate biogeochemical and hydrologic processes across multiple scales (Running and Hunt, 1993). In this investigation, BIOME-BGC was used to estimate daily water and carbon budgets for the BOREAS tower flux sites for 1994. Carbon variables estimated by the model include gross primary production (i.e., net photosynthesis), maintenance and heterotrophic respiration, net primary production, and net ecosystem carbon exchange. Hydrologic variables estimated by the model include snowcover, evaporation, transpiration, evapotranspiration, soil moisture, and outflow. The information provided by the investigation includes input initialization and model output files for various sites in tabular ASCII format.

Modeling Carbon and Water Budgets in the Lushi Basin with Biome-BGC

Institute of Scientific and Technical Information of China (English)

Dong Wenjuan; Qi Ye; Li Huimin; Zhou Dajie; Shi Duanhua; Sun Liying

2005-01-01

In this article, annual evapotranspiration (ET) and net primary productivity (NPP) of four types of vegetation were estimated for the Lushi basin,a subbasin of the Yellow River in China. These four vegetation types include: deciduous broadleaf forest,evergreen needle leaf forest, dwarf shrub and grass.Biome-BGC--a biogeochemical process model was used to calculate annual ET and NPP for each vegetation type in the study area from 1954 to 2000.Daily microclimate data of 47 years monitored by Lushi meteorological station was extrapolated to cover the basin using MT-CLIM, a mountain microclimate simulator. The output files of MTCLIM were used to feed Biome-BGC. We used average ecophysiological values of each type of vegetation supplied by Numerical Terradynamic Simulation Group (NTSG) in the University of Montana as input ecophysiological constants file.The estimates of daily NPP in early July and annual ET on these four biome groups were compared respectively with field measurements and other studies.Daily gross primary production (GPP) of evergreen needle leaf forest measurements were very dose to the output of Biome-BGC, but measurements of broadleaf forest and dwarf shrub were much smaller than the simulation result. Simulated annual ET and NPP had a significant correlation with precipitation,indicating precipitation is the major environmental factor affecting ET and NPP in the study area.Precipitation also is the key climatic factor for the interannual ET and NPP variations.

BIOME: A browser-aware search and order system

Science.gov (United States)

Grubb, Jon W.; Jennings, Sarah V.; Yow, Teresa G.; Daughterty, Patricia F.

1996-01-01

The Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC), which is associated with NASA's Earth Observing System Data and Information System (EOSDIS), provides access to a large number of tabular and imagery datasets used in ecological and environmental research. Because of its large and diverse data holdings, the challenge for the ORNL DAAC is to help users find data of interest from the hundreds of thousands of files available at the DAAC without overwhelming them. Therefore, the ORNL DAAC developed the Biogeochemical Information Ordering Management Environment (BIOME), a search and order system for the World Wide Web (WWW). The WWW provides a new vehicle that allows a wide range of users access to the data. This paper describes the specialized attributes incorporated into BIOME that allow researchers easy access to an otherwise bewildering array of data products.

Biome-BGC: Modeling Effects of Disturbance and Climate (Thornton et al. 2002)

Data.gov (United States)

National Aeronautics and Space Administration — ABSTRACT: This archived model product contains the directions, executables, and procedures for running Biome-BGC, Version 4.1.1, to recreate the results of the...

Methane Production and Transport within the Marsh Biome of Biosphere 2

Science.gov (United States)

Molnar, Jennifer; Goodridge, Kelven

1997-01-01

In recent decades, the concentration of methane in the earth's atmosphere increased 1-2% annually. It's rate of increases, combined with methane's effectiveness as a greenhouse gas, has led to an intensive research effort to determine the sources and sinks of the gas in the environment. Biosphere 2 offers a unique opportunity to contribute to the effort because it lacks a major photochemical sink present in the Earth's atmosphere. Researchers can therefore concentrate on biological processes involved in methane cycles. Wetlands are a large source of atmospheric methane, due to anoxic conditions in the sediments and the abundance of organic materials. In order to determine if these conditions in Biosphere 2 also promote methane production, this study looked for the fluxes of methane and methods of transport of the gas from from the water and sediments to the atmosphere in the Marsh Biome. Fluxes of methane from the sediments and waters were measured using static chambers, peepers, and leaf bags. Fluxes and vertical profiles of methane in the sediments show that substantial amounts of methane are being produced in the marsh and are being transported into the Biosphere 2 environment.

Adapting the Biome-BGC Model to New Zealand Pastoral Agriculture: Climate Change and Land-Use Change

Science.gov (United States)

Keller, E. D.; Baisden, W. T.; Timar, L.

2011-12-01

We have adapted the Biome-BGC model to make climate change and land-use scenario estimates of New Zealand's pasture production in 2020 and 2050, with comparison to a 2005 baseline. We take an integrated modelling approach with the aim of enabling the model's use for policy assessments across broadly related issues such as climate change mitigation and adaptation, land-use change, and greenhouse gas projections. The Biome-BGC model is a biogeochemical model that simulates carbon, water, and nitrogen cycles in terrestrial ecosystems. We introduce two new 'ecosystems', sheep/beef and dairy pasture, within the existing structure of the Biome-BGC model and calibrate its ecophysiological parameters against pasture clipping data from diverse sites around New Zealand to form a baseline estimate of total New Zealand pasture production. Using downscaled AR4 climate projections, we construct mid- and upper-range climate change scenarios in 2020 and 2050. We produce land-use change scenarios in the same years by combining the Biome-BGC model with the Land Use in Rural New Zealand (LURNZ) model. The LURNZ model uses econometric approaches to predict future land-use change driven by changes in net profits driven by expected pricing, including the introduction of an emission trading system. We estimate the relative change in national pasture production from our 2005 baseline levels for both sheep/beef and dairy systems under each scenario.

Hantavirus pulmonary syndrome and rodent reservoirs in the savanna-like biome of Brazil's southeastern region.

Science.gov (United States)

Limongi, J E; Oliveira, R C; Guterres, A; Costa Neto, S F; Fernandes, J; Vicente, L H B; Coelho, M G; Ramos, V N; Ferreira, M S; Bonvicino, C R; D'Andrea, P S; Lemos, E R S

2016-04-01

This paper describes the diversity of rodent fauna in an area endemic for hantavirus cardiopulmonary syndrome (HCPS) in Brazil, the population dynamics and the relationship of rodents with hantavirus in the Cerrado (savanna-like) biome. Additionally, an analysis is made of the partial S segment sequences of the hantaviruses obtained from serologically confirmed human HCPS cases and from rodent specimens. Rodents were collected during four campaigns. Human serum samples were collected from suspected cases of HCPS at hospitals in the state of Minas Gerais. The samples antibody-reactive by ELISA were processed by RT-PCR. The PCR product was amplified and sequenced. Hantavirus was detected only in Necromys lasiurus, the wild rodent species most prevalent in the Cerrado biome (min-max: 50-83·7%). All the six human serum samples were hantavirus seropositive and five showed amplified PCR products. The analysis of the nucleotide sequences showed the circulation of a single genotype, the Araraquara hantavirus. The environmental changes that have occurred in the Cerrado biome in recent decades have favoured N. lasiurus in interspecific competition of habitats, thus increasing the risk of contact between humans and rodent species infected with hantavirus. Our data corroborate the definition of N. lasiurus as the main hantavirus reservoir in the Cerrado biome.

Biome-BGC: Modeling Carbon Dynamics in Ponderosa Pine Stands (Law et al. 2003)

Data.gov (United States)

National Aeronautics and Space Administration — This archived model product contains the directions, executables, and procedures for running Biome-BGC, Version 4.1.2, to recreate the results of the following...

Testing the applicability of BIOME-BGC to simulate beech gross primary production in Europe using a new continental weather dataset

OpenAIRE

Chiesi , Marta; Chirici , Gherardo; Marchetti , Marco; Hasenauer , Hubert; Moreno , Adam; Knohl , Alexander; Matteucci , Giorgio; Pilegaard , Kim; Granier , André; Longdoz , Bernard; Maselli , Fabio

2016-01-01

Key message A daily 1-km Pan-European weather dataset can drive the BIOME-BGC model for the estimation of current and future beech gross primary production (GPP). Annual beech GPP is affected primarily by spring temperature and more irregularly by summer water stress. [br/] Context The spread of beech forests in Europe enhances the importance of modelling and monitoring their growth in view of ongoing climate changes. [br/] Aims The current paper assesses the capability o...

Dynamic vegetation modeling of tropical biomes during Heinrich events

Science.gov (United States)

Handiani, Dian Noor; Paul, André; Dupont, Lydie M.

2010-05-01

Heinrich events are thought to be associated with a slowdown of the Atlantic Meridional Overturning Circulation (AMOC), which in turn would lead to a cooling of the North Atlantic Ocean and a warming of the South Atlantic Ocean (the "bipolar seesaw" hypothesis). The accompanying abrupt climate changes occurred not only in the ocean but also on the continents. Changes were strongest in the Northern Hemisphere but were registered in the tropics as well. Pollen data from Angola and Brazil showed that climate changes during Heinrich events affected vegetation patterns very differently in eastern South America and western Africa. To understand the differential response in the terrestrial tropics, we studied the vegetation changes during Heinrich events by using a dynamic global vegetation model (TRIFFID) as part of the University of Victoria (UVic) Earth System-Climate Model (ESCM). The model results show a bipolar seesaw pattern in temperature and precipitation during a near-collapse of the AMOC. The succession in plant-functional types (PFTs) showed changes from forest to shrubs to desert, including spreading desert in northwest Africa, retreating broadleaf trees in West Africa and northern South America, but advancing broadleaf trees in Brazil. The pattern is explained by a southward shift of the tropical rainbelt resulting in a strong decrease in precipitation over northwest and West Africa as well as in northern South America, but an increase in precipitation in eastern Brazil. To facilitate the comparison between modeled vegetation results with pollen data, we diagnosed the distribution of biomes from the PFT coverage and the simulated model climate. The biome distribution was computed for Heinrich event 1 and the Last Glacial Maximum as well as for pre-industrial conditions. We used a classification of biomes in terms of "mega-biomes", which were defined following a scheme originally proposed by BIOME 6000 (v 4.2). The biome distribution of the Sahel region

Intrinsic climate dependency of ecosystem light and water-use-efficiencies across Australian biomes

International Nuclear Information System (INIS)

Shi, Hao; Li, Longhui; Eamus, Derek; Cleverly, James; Huete, Alfredo; Yu, Qiang; Beringer, Jason; Van Gorsel, Eva; Hutley, Lindsay

2014-01-01

The sensitivity of ecosystem gross primary production (GPP) to availability of water and photosynthetically active radiation (PAR) differs among biomes. Here we investigated variations of ecosystem light-use-efficiency (eLUE: GPP/PAR) and water-use-efficiency (eWUE: GPP/evapotranspiration) among seven Australian eddy covariance sites with differing annual precipitation, species composition and temperature. Changes to both eLUE and eWUE were primarily correlated with atmospheric vapor pressure deficit (VPD) at multiple temporal scales across biomes, with minor additional correlations observed with soil moisture and temperature. The effects of leaf area index on eLUE and eWUE were also relatively weak compared to VPD, indicating an intrinsic dependency of eLUE and eWUE on climate. Additionally, eLUE and eWUE were statistically different for biomes between summer and winter, except eWUE for savannas and the grassland. These findings will improve our understanding of how light- and water-use traits in Australian ecosystems may respond to climate change. (letter)

Reimplementation of the Biome-BGC model to simulate successional change.

Science.gov (United States)

Bond-Lamberty, Ben; Gower, Stith T; Ahl, Douglas E; Thornton, Peter E

2005-04-01

Biogeochemical process models are increasingly employed to simulate current and future forest dynamics, but most simulate only a single canopy type. This limitation means that mixed stands, canopy succession and understory dynamics cannot be modeled, severe handicaps in many forests. The goals of this study were to develop a version of Biome-BGC that supported multiple, interacting vegetation types, and to assess its performance and limitations by comparing modeled results to published data from a 150-year boreal black spruce (Picea mariana (Mill.) BSP) chronosequence in northern Manitoba, Canada. Model data structures and logic were modified to support an arbitrary number of interacting vegetation types; an explicit height calculation was necessary to prioritize radiation and precipitation interception. Two vegetation types, evergreen needle-leaf and deciduous broadleaf, were modeled based on site-specific meteorological and physiological data. The new version of Biome-BGC reliably simulated observed changes in leaf area, net primary production and carbon stocks, and should be useful for modeling the dynamics of mixed-species stands and ecological succession. We discuss the strengths and limitations of Biome-BGC for this application, and note areas in which further work is necessary for reliable simulation of boreal biogeochemical cycling at a landscape scale.

Using an Exploratory Internet Activity & Trivia Game to Teach Students about Biomes

Science.gov (United States)

Richardson, Matthew L.

2009-01-01

Students in life science classes need an introduction to biomes, including an introduction to the concept, key biotic and abiotic features of biomes, and geographic locations of biomes. In this activity, students in seventh- and eighth-grade science classes used a directed exploratory Internet activity to learn about biomes. The author tested…

The extent of forest in dryland biomes

Science.gov (United States)

Jean-Francois Bastin; Nora Berrahmouni; Alan Grainger; Danae Maniatis; Danilo Mollicone; Rebecca Moore; Chiara Patriarca; Nicolas Picard; Ben Sparrow; Elena Maria Abraham; Kamel Aloui; Ayhan Atesoglu; Fabio Attore; Caglar Bassullu; Adia Bey; Monica Garzuglia; Luis G. GarcÌa-Montero; Nikee Groot; Greg Guerin; Lars Laestadius; Andrew J. Lowe; Bako Mamane; Giulio Marchi; Paul Patterson; Marcelo Rezende; Stefano Ricci; Ignacio Salcedo; Alfonso Sanchez-Paus Diaz; Fred Stolle; Venera Surappaeva; Rene Castro

2017-01-01

Dryland biomes cover two-fifths of Earth’s land surface, but their forest area is poorly known. Here, we report an estimate of global forest extent in dryland biomes, based on analyzing more than 210,000 0.5-hectare sample plots through a photo-interpretation approach using large databases of satellite imagery at (i) very high spatial resolution and (ii) very high...

Importance of ecotone type to landscape dynamics at biome transition zones

Science.gov (United States)

Landscapes in biome transition zones consist of a mosaic of patches dominated or codominated by species from adjacent biomes. Shifts in the vegetation composition and dynamics of a biome transition zone depend upon the underlying patch dynamics of the ecotones between these dominant species. Landsc...

Estimation of the Net Ecosystem Productivity in Huang-Huai Hai Region Combining with Biome-BGC Model and Remote Sensing Data%遥感数据结合Biome-BGC模型估算黄淮海地区生态系统生产力

Institute of Scientific and Technical Information of China (English)

胡波; 孙睿; 陈永俊; 冯丽超; 孙亮

2011-01-01

植被净生态系统生产力（NEP）和净第一性生产力（NPP）作为表征植被活动的关键变量,在全球变化研究及区域生态环境评价中起着很重要的作用。Biome-BGC是一个模拟生态系统植被和土壤中的能量、水、碳、氮的流动和存储的生物地球化学循环模型。论文利用2004年时间序列MODIS LAI遥感产品和气象数据,对黄淮海地区的NEP和NPP进行了模拟估算,由于Biome-BGC模型没有农作物生理生态参数,农作物模拟通过修改草地生理生态参数,并在增加施肥、灌溉和收割代码基础上实现。结果表明,2004年黄淮海地区NEP、NPP呈现南部大于北部的空间分布特征;不同植被类型平均NEP和NPP大小顺序分别为：混交林〉落叶阔叶林〉常绿针叶林〉农作物〉灌木〉草地、混交林〉农作物〉落叶阔叶林〉常绿针叶林〉灌木〉草地;与观测数据、MODIS NPP产品和统计数据进行对比,表明Biome-BGC模型可较好用于区域植被生产力的模拟,农作物模拟结果与统计数据的决定系数达到0.612 3,且模拟得到的黄淮海地区农作物NPP比MODIS NPP产品更接近统计值。%As two key variables to represent vegetation activities,the Net Ecosystem Production（NEP） and the Net Primary Productivity（NPP）played important roles in the study of global change and regional ecological environment evaluation.Biome-BGC was a biogeochemical cycles model,which could simulate the storage and fluxes of water,carbon and nitrogen within the vegetation and soil components of a terrestrial ecosystem.In this paper,in use of the series of MODIS LAI product and the meteorological data in 2004,we simulated the NEP and NPP in the Huang-Huai-Hai Region.Since there was no crop eco-physiological parameters in the Biome-BGC model,we simulated the crop by modifying the grass eco-physiological parameters,and adding the code of fertilizers,irrigation and harvest.The simulated results showed

Simulating economics and environmental impacts of beef and soybean systems in Brazil's Pamas and Amozon Biomes

Science.gov (United States)

Recent reductions in the deforestation of the Amazon biome have highlighted the need for the sustainable intensification of beef and commodity crop production in Brazil to increase agricultural productivity without accelerating adverse environmental impacts related to greenhouse gas emissions, eutro...

Diverging responses of tropical Andean biomes under future climate conditions.

Directory of Open Access Journals (Sweden)

Carolina Tovar

Full Text Available Observations and projections for mountain regions show a strong tendency towards upslope displacement of their biomes under future climate conditions. Because of their climatic and topographic heterogeneity, a more complex response is expected for biodiversity hotspots such as tropical mountain regions. This study analyzes potential changes in the distribution of biomes in the Tropical Andes and identifies target areas for conservation. Biome distribution models were developed using logistic regressions. These models were then coupled to an ensemble of 8 global climate models to project future distribution of the Andean biomes and their uncertainties. We analysed projected changes in extent and elevational range and identified regions most prone to change. Our results show a heterogeneous response to climate change. Although the wetter biomes exhibit an upslope displacement of both the upper and the lower boundaries as expected, most dry biomes tend to show downslope expansion. Despite important losses being projected for several biomes, projections suggest that between 74.8% and 83.1% of the current total Tropical Andes will remain stable, depending on the emission scenario and time horizon. Between 3.3% and 7.6% of the study area is projected to change, mostly towards an increase in vertical structure. For the remaining area (13.1%-17.4%, there is no agreement between model projections. These results challenge the common believe that climate change will lead to an upslope displacement of biome boundaries in mountain regions. Instead, our models project diverging responses, including downslope expansion and large areas projected to remain stable. Lastly, a significant part of the area expected to change is already affected by land use changes, which has important implications for management. This, and the inclusion of a comprehensive uncertainty analysis, will help to inform conservation strategies in the Tropical Andes, and to guide similar

Generality of leaf trait relationships: A test across six biomes

Energy Technology Data Exchange (ETDEWEB)

Reich, P.B. [Univ. of Minnesota, Saint Paul, MN (United States). Dept. of Forest Resources; Ellsworth, D.S. [Brookhaven National Lab., Upton, NY (United States). Dept. of Applied Science; Walters, M.B. [Michigan State Univ., East Lansing, MI (United States). Dept. of Forestry; Vose, J.M. [Forest Service, Otto, NC (United States). Coweeta Hydrological Lab.; Gresham, C. [Clemson Univ., Georgetown, SC (United States). Baruch Forest Inst.; Volin, J.C. [Florida Atlantic Univ., Davie, FL (United States). Div. of Science; Bowman, W.D. [Inst. of Arctic and Alpine Research, Boulder, CO (United States). Mountain Research Station]|[Univ. of Colorado, Boulder, CO (United States). Dept. of Evolutionary, Population, and Organismic Biology

1999-09-01

Convergence in interspecific leaf trait relationships across diverse taxonomic groups and biomes would have important evolutionary and ecological implications. Such convergence has been hypothesized to result from trade-offs that limit the combination of plant traits for any species. Here the authors address this issue by testing for biome differences in the slope and intercept of interspecific relationships among leaf traits: longevity, net photosynthetic capacity (A{sub max}), leaf diffusive conductance (G{sub S}), specific leaf area (SLA), and nitrogen (N) status, for more than 100 species in six distinct biomes of the Americas. The six biomes were: alpine tundra-subalpine forest ecotone, cold temperate forest-prairie ecotone, montane cool temperate forest, desert shrubland, subtropical forest, and tropical rain forest. Despite large differences in climate and evolutionary history, in all biomes mass-based leaf N (N{sub mass}), SLA, G{sub S}, and A{sub max} were positively related to one another and decreased with increasing leaf life span. The relationships between pairs of leaf traits exhibited similar slopes among biomes, suggesting a predictable set of scaling relationships among key leaf morphological, chemical, and metabolic traits that are replicated globally among terrestrial ecosystems regardless of biome or vegetation type. However, the intercept (i.e., the overall elevation of regression lines) of relationships between pairs of leaf traits usually differed among biomes. With increasing aridity across sites, species had greater A{sub max} for a given level of G{sub S} and lower SLA for any given leaf life span. Using principal components analysis, most variation among species was explained by an axis related to mass-based leaf traits (A{sub max}, N, and SLA) while a second axis reflected climate, G{sub S}, and other area-based leaf traits.

Remotely sensed vegetation phenology for describing and predicting the biomes of South Africa

CSIR Research Space (South Africa)

Wessels, Konrad J

2011-02-01

Full Text Available the distribution of the recently redefined biomes be predicted based on remotely sensed, phenology and productivity metrics? Ten-day, 1 km, NDVI AVHRR were analysed for the period 1985 to 2000. Phenological metrics such as start, end and length of the growing...

Guide to the literature on research in the grassland biome of South Africa

CSIR Research Space (South Africa)

Tainton, MN

1984-12-01

Full Text Available the development of an understanding of how these communities can best be managed to ensure their sustained producti¬vity, or indeed to increase their productivity. This publication serves to highlight the main work which has been undertaken in this biome...

The Brazilian Pampa: A Fragile Biome

Directory of Open Access Journals (Sweden)

Valdir Marcos Stefenon

2009-12-01

Full Text Available Biodiversity is one of the most fundamental properties of Nature. It underpins the stability of ecosystems, provides vast bioresources for economic use, and has important cultural significance for many people. The Pampa biome, located in the southernmost state of Brazil, Rio Grande do Sul, illustrates the direct and indirect interdependence of humans and biodiversity. The Brazilian Pampa lies within the South Temperate Zone where grasslands scattered with shrubs and trees are the dominant vegetation. The soil, originating from sedimentary rocks, often has an extremely sandy texture that makes them fragile—highly prone to water and wind erosion. Human activities have converted or degraded many areas of this biome. In this review we discuss our state-of-the-art knowledge of the diversity and the major biological features of this regions and the cultural factors that have shaped it. Our aim is to contribute toward a better understanding of the current status of this special biome and to describe how the interaction between human activities and environment affects the region, highlighting the fragility of the Brazilian Pampa.

Concluding remarks: overall impacts on biodiversity and future perspectives for conservation in the Pantanal biome

Directory of Open Access Journals (Sweden)

CJR. Alho

Full Text Available The Pantanal biome is characterised by seasonal flooding which determines specific ecosystem processes, with the occurrence of adapted plants and animals to the annual shrinking and expansion of habitats due to the seasonal hydrological regime. Biodiversity abundance varies during the dry and wet seasons. The Pantanal's biodiversity is a fundamental component of ecosystem services for human society, including nutrient cycling, fish production, ecotourism, carbon storage, flood control, among others, which are relevant to regional and global environmental consequences. The biome has been impacted by the conversion of natural vegetation into agricultural fields and pasture for cattle raising, with alteration and loss of natural habitats and biodiversity. Major negative impacts occur in uplands, with drastic deforestation of savanna vegetation, where main rivers feeding the Pantanal have their springs. This article discusses future needs and priorities for ecological research, in order to better understand the biome's natural system, to achieve conservation and sustainable use.

Concluding remarks: overall impacts on biodiversity and future perspectives for conservation in the Pantanal biome.

Science.gov (United States)

Alho, C J R

2011-04-01

The Pantanal biome is characterised by seasonal flooding which determines specific ecosystem processes, with the occurrence of adapted plants and animals to the annual shrinking and expansion of habitats due to the seasonal hydrological regime. Biodiversity abundance varies during the dry and wet seasons. The Pantanal's biodiversity is a fundamental component of ecosystem services for human society, including nutrient cycling, fish production, ecotourism, carbon storage, flood control, among others, which are relevant to regional and global environmental consequences. The biome has been impacted by the conversion of natural vegetation into agricultural fields and pasture for cattle raising, with alteration and loss of natural habitats and biodiversity. Major negative impacts occur in uplands, with drastic deforestation of savanna vegetation, where main rivers feeding the Pantanal have their springs. This article discusses future needs and priorities for ecological research, in order to better understand the biome's natural system, to achieve conservation and sustainable use.

biojs-io-biom, a BioJS component for handling data in Biological Observation Matrix (BIOM format [version 2; referees: 1 approved, 2 approved with reservations

Directory of Open Access Journals (Sweden)

Markus J. Ankenbrand

2017-01-01

Full Text Available The Biological Observation Matrix (BIOM format is widely used to store data from high-throughput studies. It aims at increasing interoperability of bioinformatic tools that process this data. However, due to multiple versions and implementation details, working with this format can be tricky. Currently, libraries in Python, R and Perl are available, whilst such for JavaScript are lacking. Here, we present a BioJS component for parsing BIOM data in all format versions. It supports import, modification, and export via a unified interface. This module aims to facilitate the development of web applications that use BIOM data. Finally, we demonstrate its usefulness by two applications that already use this component. Availability: https://github.com/molbiodiv/biojs-io-biom, https://dx.doi.org/10.5281/zenodo.218277

Nitrogen-containing bisphosphonate induces a newly discovered hematopoietic structure in the omentum of an anemic mouse model by stimulating G-CSF production.

Science.gov (United States)

Otsuka, Hirotada; Yagi, Hideki; Endo, Yasuo; Soeta, Satoshi; Nonaka, Naoko; Nakamura, Masanori

2017-02-01

We previously reported that the injection of nitrogen-containing bisphosphonate (NBP) induced the site of erythropoiesis to shift from the bone marrow (BM) to the spleen. Our previous study established a severely anemic mouse model that was treated with a combination of NBP with phenylhydrazine (PHZ), which induced newly discovered hematopoietic organs in the omentum. No reports have shown that new hematopoietic organs form under any condition. We characterized the structures and factors related to the formation of these new organs. Splenectomized mice were treated with NBP to inhibit erythropoiesis in the BM and then injected with PHZ to induce hemolytic anemia. The mice showed severe anemia and wine-colored structures appeared in the omentum. Some hematopoietic cells, including megakaryocytes, and well-developed sinuses were observed in these structures. Numerous TER119-positive erythroblasts were located with cells positive for PCNA, a cell proliferation marker. C-kit-positive cells were detected and mRNAs related to hematopoiesis were expressed in these structures. Moreover, TER119-positive erythroblasts emerged and formed clusters and hematopoiesis-related factors were detected in the omentum of mice treated with NBP and PHZ. The levels of G-CSF in the serum and hematopoietic progenitor cells (HPCs) in the peripheral blood were increased upon treatment with both NBP and PHZ. These results suggest that the induced hematopoietic structures act as the sites of erythropoiesis and that NBP-induced G-CSF production causes HPC mobilization, homing and colonization in the omentum because they constitutively express some factors, including SDF-1; thus, the newly discovered hematopoietic structure in this study might be formed.

A spatial implementation of the BIOME-BGC to model grassland GPP production and water budgets in the Ecuadorian Andean Region

Science.gov (United States)

Minaya, Veronica; Corzo, Gerald; van der Kwast, Johannes; Mynett, Arthur

2016-04-01

Many terrestrial biogeochemistry process models have been applied around the world at different scales and for a large range of ecosystems. Grasslands, and in particular the ones located in the Andean Region are essential ecosystems that sustain important ecological processes; however, just a few efforts have been made to estimate the gross primary production (GPP) and the hydrological budgets for this specific ecosystem along an altitudinal gradient. A previous study, which is one of the few available in the region, considered the heterogeneity of the main properties of the páramo vegetation and showed significant differences in plant functional types, site/soil parameters and daily meteorology. This study extends the work above mentioned and uses spatio-temporal analysis of the BIOME-BGC model results. This was done to simulate the GPP and the water fluxes in space and time, by applying altitudinal analysis. The catchment located at the southwestern slope of the Antisana volcano in Ecuador was selected as a representative area of the Andean páramos and its hydrological importance as one of the main sources of a water supply reservoir in the region. An accurate estimation of temporal changes in GPP in the region is important for carbon budget assessments, evaluation of the impact of climate change and biomass productivity. This complex and yet interesting problem was integrated by the ecosystem process model BIOME-BGC, the results were evaluated and associated to the land cover map where the growth forms of vegetation were identified. The responses of GPP and the water fluxes were not only dependent on the environmental drivers but also on the ecophysiology and the site specific parameters. The model estimated that the GPP at lower elevations doubles the amount estimated at higher elevations, which might have a large implication during extrapolations at larger spatio-temporal scales. The outcomes of the stand hydrological processes demonstrated a wrong

Modelling insights on the partition of evapotranspiration components across biomes

Science.gov (United States)

Fatichi, Simone; Pappas, Christoforos

2017-04-01

Recent studies using various methodologies have found a large variability (from 35 to 90%) in the ratio of transpiration to total evapotranspiration (denoted as T:ET) across biomes or even at the global scale. Concurrently, previous results suggest that T:ET is independent of mean precipitation and has a positive correlation with Leaf Area Index (LAI). We used the mechanistic ecohydrological model, T&C, with a refined process-based description of soil resistance and a detailed treatment of canopy biophysics and ecophysiology, to investigate T:ET across multiple biomes. Contrary to observation-based estimates, simulation results highlight a well-constrained range of mean T:ET across biomes that is also robust to perturbations of the most sensitive parameters. Simulated T:ET was confirmed to be independent of average precipitation, while it was found to be uncorrelated with LAI across biomes. Higher values of LAI increase evaporation from interception but suppress ground evaporation with the two effects largely cancelling each other in many sites. These results offer mechanistic, model-based, evidence to the ongoing research about the range of T:ET and the factors affecting its magnitude across biomes.

Updated estimate of carbon balance on Russian territory

Energy Technology Data Exchange (ETDEWEB)

Kurganova, I. N.; Kudeyarov, V. N.; Gerenyu, V. O. Lopes de (Institute of Physicochemical and Biological Problems in Soil Science, RAS, Pushchino (Russian Federation)), e-mail: ikurg@mail.ru

2010-11-15

The land use system in Russia changed considerably after 1990: 30.2 million ha of croplands were abandoned. Based on the own field investigations that were carried out in abandoned lands of different age (Luvic Phaeozems, deciduous forest zone; Moscow region, 54 deg 50' N, 37 deg 37' E), it has been shown that after 4.5 yr of abandonment, the former croplands acted as a stable sink of CO{sub 2}. The net ecosystem production (NEP) in the post-agrogenic ecosystems averaged 245 +- 73gCm-2 yr-1 for the first 15 yr after land use change that corresponds to an estimated 74 +- 22 Tg C yr-1 for the total area of abandoned lands in Russian Federation. Currently, the Russian territory acts as an absolute sink of atmospheric CO{sub 2} at a rate about 0.90 Pg C yr-1. Using three different approaches, it was demonstrated that after 1990, the carbon sequestration in Russian soils (0.20 cm layer) has averaged 34 +- 2.2 Tg C yr-1. This soil C forms net biome production (NBP) where carbon lifetime is much longer than in 'Kyoto forests'. Thus, the post-agrogenic ecosystems in Russia provide with the additional CO{sub 2} sink in NEP and NBP that could annually compensate about 25% of the current fossil fuel emissions in the Russian Federation

La prosodia como identificador biométrico

OpenAIRE

Farrús i Cabeceran, Mireia

2011-01-01

La biometría tiene como objetivo el reconocimiento de personas mediante uno o más identificadores biométricos como la voz, la cara o las huellas dactilares, entre otros. Gracias a la buena aceptación social y el poco intrusismo en los individuos, la voz ha sido, tradicionalmente, uno de los identificadores más utilizados en los sistemas biométricos. Estos sistemas de reconocimiento basados en la voz utilizan, habitualmente, características relacionadas con el espectro de la voz. No obstante, ...

On coupling global biome models with climate models

OpenAIRE

Claussen, M.

1994-01-01

The BIOME model of Prentice et al. (1992; J. Biogeogr. 19: 117-134), which predicts global vegetation patterns in equilibrium with climate, was coupled with the ECHAM climate model of the Max-Planck-Institut fiir Meteorologie, Hamburg, Germany. It was found that incorporation of the BIOME model into ECHAM, regardless at which frequency, does not enhance the simulated climate variability, expressed in terms of differences between global vegetation patterns. Strongest changes are seen only betw...

Improved simulation of poorly drained forests using Biome-BGC.

Science.gov (United States)

Bond-Lamberty, Ben; Gower, Stith T; Ahl, Douglas E

2007-05-01

Forested wetlands and peatlands are important in boreal and terrestrial biogeochemical cycling, but most general-purpose forest process models are designed and parameterized for upland systems. We describe changes made to Biome-BGC, an ecophysiological process model, that improve its ability to simulate poorly drained forests. Model changes allowed for: (1) lateral water inflow from a surrounding watershed, and variable surface and subsurface drainage; (2) adverse effects of anoxic soil on decomposition and nutrient mineralization; (3) closure of leaf stomata in flooded soils; and (4) growth of nonvascular plants (i.e., bryophytes). Bryophytes were treated as ectohydric broadleaf evergreen plants with zero stomatal conductance, whose cuticular conductance to CO(2) was dependent on plant water content. Individual model changes were parameterized with published data, and ecosystem-level model performance was assessed by comparing simulated output to field data from the northern BOREAS site in Manitoba, Canada. The simulation of the poorly drained forest model exhibited reduced decomposition and vascular plant growth (-90%) compared with that of the well-drained forest model; the integrated bryophyte photosynthetic response accorded well with published data. Simulated net primary production, biomass and soil carbon accumulation broadly agreed with field measurements, although simulated net primary production was higher than observed data in well-drained stands. Simulated net primary production in the poorly drained forest was most sensitive to oxygen restriction on soil processes, and secondarily to stomatal closure in flooded conditions. The modified Biome-BGC remains unable to simulate true wetlands that are subject to prolonged flooding, because it does not track organic soil formation, water table changes, soil redox potential or anaerobic processes.

Estimation of Carbon Flux of Forest Ecosystem over Qilian Mountains by BIOME-BGC Model

Science.gov (United States)

Yan, Min; Tian, Xin; Li, Zengyuan; Chen, Erxue; Li, Chunmei

2014-11-01

The gross primary production (GPP) and net ecosystem exchange (NEE) are important indicators for carbon fluxes. This study aims at evaluating the forest GPP and NEE over the Qilian Mountains using meteorological, remotely sensed and other ancillary data at large scale. To realize this, the widely used ecological-process-based model, Biome-BGC, and remote-sensing-based model, MODIS GPP algorithm, were selected for the simulation of the forest carbon fluxes. The combination of these two models was based on calibrating the Biome-BGC by the optimized MODIS GPP algorithm. The simulated GPP and NEE values were evaluated against the eddy covariance observed GPPs and NEEs, and the well agreements have been reached, with R2=0.76, 0.67 respectively.

Mid- to Late-Holocene pollen-based biome reconstructions for Colombia

NARCIS (Netherlands)

Marchant, R.; Behling, H.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Geel, van B.; Hammen, van der T.; Reenen, van T.; Wille, M.

2001-01-01

The assignment of Colombian pollen data to biomes allows the data to be synthesised at 10 `time windows' from the present-day to 6000 radiocarbon years before present (BP). The modern reconstructed biomes are compared to a map of modern potential vegetation to check the applicability of the method

Biosphere 2's Marsh Biome

Science.gov (United States)

Molnar, Jennifer; Goodridge, Kelven

1997-01-01

The Marsh Biome, which was modeled after the mangroves and marshes of southwest Florida, has an area of 441.2 sq m separated into three hydrologically independent sections: the Freshwater, Oligohaline and Salt Marshes. The divisions are made based on their salinity (approximately 0, 4, and 34 ppt. respectively), but they also contain different biological communities. The Freshwater and Oligohaline Marshes are mostly filled with various grasses and several trees, while the Salt Marsh houses regions of red, black, and white mangroves (Rhizophora mangle, Avicennia germinans, and Languncularia racemosa respectively). Overall, there are an estimated 80 species of plants within the biome. Water in the Salt Marsh follows a meandering stream from the algal turf scrubbers (apparatuses that clean the water of its nutrients and heavy metals while increasing dissolved oxygen levels) which have an outlet in the Salt Marsh section near sites 4 and 5 to the Fringing Red Mangrove section. The sections of the Salt Marsh are separated by walls of concrete with openings to allow the stream to flow through. Throughout this study, conducted through the months of June and July, many conditions within the biome remained fairly constant. The temperature was within a degree or two of 25 C, mostly depending on whether the sample site was in direct sunlight or shaded. The pH throughout the Salt Marsh was 8.0 +/- 0.2, and the lower salinity waters only dropped below this soon after rains. The water rdepth and dissolved oxygen varied, however, between sites.

A biome-scale assessment of the impact of invasive alien plants on ecosystem services in South Africa.

Science.gov (United States)

van Wilgen, B W; Reyers, B; Le Maitre, D C; Richardson, D M; Schonegevel, L

2008-12-01

This paper reports an assessment of the current and potential impacts of invasive alien plants on selected ecosystem services in South Africa. We used data on the current and potential future distribution of 56 invasive alien plant species to estimate their impact on four services (surface water runoff, groundwater recharge, livestock production and biodiversity) in five terrestrial biomes. The estimated reductions in surface water runoff as a result of current invasions were >3000 million m(3) (about 7% of the national total), most of which is from the fynbos (shrubland) and grassland biomes; the potential reductions would be more than eight times greater if invasive alien plants were to occupy the full extent of their potential range. Impacts on groundwater recharge would be less severe, potentially amounting to approximately 1.5% of the estimated maximum reductions in surface water runoff. Reductions in grazing capacity as a result of current levels of invasion amounted to just over 1% of the potential number of livestock that could be supported. However, future impacts could increase to 71%. A 'biodiversity intactness index' (the remaining proportion of pre-modern populations) ranged from 89% to 71% for the five biomes. With the exception of the fynbos biome, current invasions have almost no impact on biodiversity intactness. Under future levels of invasion, however, these intactness values decrease to around 30% for the savanna, fynbos and grassland biomes, but to even lower values (13% and 4%) for the two karoo biomes. Thus, while the current impacts of invasive alien plants are relatively low (with the exception of those on surface water runoff), the future impacts could be very high. While the errors in these estimates are likely to be substantial, the predicted impacts are sufficiently large to suggest that there is serious cause for concern.

Factors affecting ammonium uptake in streams - an inter-biome perspective

Science.gov (United States)

Jackson R Webster; Partick J. Mulholland; Jennifer L. Tanks; H. Maurice Valett; Walter K. Dodds; Bruce J. Peterson; William B. Bowden; Clifford N. Dahm; Stuart Findlay; Stanley V. Gregory; Nancy B. Grimm; Stephen K. Hamilton; Sherri L. Johnson; Eugenia Marti; William H. McDowell; Judy L. Meyer; Donna D. Morrall; Steven A. Thomas; Wilfred M. Wollhem

2003-01-01

1. The Lotic Intersite Nitrogen experiment (LINX) was a coordinated study of the relationships between North American biomes and factors governing ammonium uptake in streams. Our objective was to relate inter-biome variability of ammonium uptake to physical, chemical and biological processes. 2. Data were collected from 11 streams ranging from arctic to tropical and...

Conserving the Brazilian semiarid (Caatinga) biome under climate change

DEFF Research Database (Denmark)

Oliveira, Guilherme de; Bastos Araujo, Miguel; Rangel, Thiago Fernado

2012-01-01

to assess changes in climate suitability across individual species ranges, ensemble forecasting was used based on seven bioclimatic envelope models, three atmosphere–ocean general circulation models, and two greenhouse emission gas scenarios for 2020, 2050, and 2080. We found that most species will gain...... additional threats to the biome’s biodiversity. Here, we ask if the remnants of natural vegetation in Caatinga biome, where endemic terrestrial vertebrate species occur, are likely to retain more climatic suitability under climate change scenarios than other less pristine areas of the biome. In order......The Caatinga is a semiarid biome of the northeast of Brazil with only 1 % of its territory currently conserved. The biome’s biodiversity is highly threatened due to exposure to land conversion for agricultural and cattle ranch. Climate forecasts predict increases in aridity, which could pose...

Comparative Raman study of Weyl semimetals TaAs, NbAs, TaP and NbP

International Nuclear Information System (INIS)

Liu, H W; Richard, P; Zhao, L X; Chen, G-F; Ding, H

2016-01-01

We report a comparative polarized Raman study of Weyl semimetals TaAs, NbAs, TaP and NbP. The evolution of the phonon frequencies with the sample composition allows us to determine experimentally which atoms are mainly involved for each vibration mode. Our results confirm previous first-principles calculations indicating that the A 1 , B 1 (2), E(2) and E(3) modes involve mainly the As(P) atoms, the B 1 (1) mode is mainly related to Ta(Nb) atoms, and the E(1) mode involves both kinds of atoms. By comparing the energy of the different modes, we establish that the B 1 (1), B 1 (2), E(2) and E(3) become harder with increasing chemical pressure. This behaviour differs from our observation on the A 1 mode, which decreases in energy, in contrast to its behaviour under external pressure. (paper)

Description of the Fynbos Biome Project

CSIR Research Space (South Africa)

Kruger, FJ

1978-06-01

Full Text Available The objectives, organization and research programme of the Fynbos Biome Project being undertaken in the south-west and southern Cape are described. The project is a cooperative multi-disciplinary study of the ecological characteristics, structure...

Copula Multivariate analysis of Gross primary production and its hydro-environmental driver; A BIOME-BGC model applied to the Antisana páramos

Science.gov (United States)

Minaya, Veronica; Corzo, Gerald; van der Kwast, Johannes; Galarraga, Remigio; Mynett, Arthur

2014-05-01

Simulations of carbon cycling are prone to uncertainties from different sources, which in general are related to input data, parameters and the model representation capacities itself. The gross carbon uptake in the cycle is represented by the gross primary production (GPP), which deals with the spatio-temporal variability of the precipitation and the soil moisture dynamics. This variability associated with uncertainty of the parameters can be modelled by multivariate probabilistic distributions. Our study presents a novel methodology that uses multivariate Copulas analysis to assess the GPP. Multi-species and elevations variables are included in a first scenario of the analysis. Hydro-meteorological conditions that might generate a change in the next 50 or more years are included in a second scenario of this analysis. The biogeochemical model BIOME-BGC was applied in the Ecuadorian Andean region in elevations greater than 4000 masl with the presence of typical vegetation of páramo. The change of GPP over time is crucial for climate scenarios of the carbon cycling in this type of ecosystem. The results help to improve our understanding of the ecosystem function and clarify the dynamics and the relationship with the change of climate variables. Keywords: multivariate analysis, Copula, BIOME-BGC, NPP, páramos

Does a General Temperature-Dependent Q10 Model of Soil Respiration Exist at Biome and Global Scale?

Institute of Scientific and Technical Information of China (English)

Hua CHEN; Han-Qin TIAN

2005-01-01

Soil respiration (SR) is commonly modeled by a Q10 (an indicator of temperature sensitivity)function in ecosystem models. Q10is usually treated as a constant of 2 in these models, although Q10 value of SR often decreases with increasing temperatures. It remains unclear whether a general temperaturedependent Q10 model of SR exists at biome and global scale. In this paper, we have compiled the long-term Q10 data of 38 SR studies ranging from the Boreal, Temperate, to Tropical/Subtropical biome on four continents.Our analysis indicated that the general temperature-dependent biome Q10 models of SR existed, especially in the Boreal and Temperate biomes. A single-exponential model was better than a simple linear model in fitting the average Q10 values at the biome scale. Average soil temperature is a better predictor of Q10 value than average air temperature in these models, especially in the Boreal biome. Soil temperature alone could explain about 50% of the Q10 variations in both the Boreal and Temperate biome single-exponential Q10 model. Q10 value of SR decreased with increasing soil temperature but at quite different rates among the three biome Q10 models. The k values (Q10 decay rate constants) were 0.09, 0.07, and 0.02/℃ in the Boreal, Temperate, and Tropical/Subtropical biome, respectively, suggesting that Q10 value is the most sensitive to soil temperature change in the Boreal biome, the second in the Temperate biome, and the least sensitive in the Tropical/Subtropical biome. This also indirectly confirms that acclimation of SR in many soil warming experiments probably occurs. The k value in the "global" single-exponential Q10 model which combined both the Boreal and Temperate biome data set was 0.08/℃. However, the global general temperature-dependent Q10model developed using the data sets of the three biomes is not adequate for predicting Q10 values of SR globally.The existence of the general temperature-dependent Q10 models of SR in the Boreal and

The effect of heterogeneous landscape dynamics on ecotone types at two convergent semi-arid biomes

Science.gov (United States)

Landscapes in biome transition zones consist of a mosaic of patches dominated or codominated by species from adjacent biomes. Shifts in the vegetation composition and dynamics of a biome transition zone depend upon the underlying patch dynamics of the ecotones between these dominant species. Landsca...

Increasing atmospheric CO2 overrides the historical legacy of multiple stable biome states in Africa.

Science.gov (United States)

Moncrieff, Glenn R; Scheiter, Simon; Bond, William J; Higgins, Steven I

2014-02-01

The dominant vegetation over much of the global land surface is not predetermined by contemporary climate, but also influenced by past environmental conditions. This confounds attempts to predict current and future biome distributions, because even a perfect model would project multiple possible biomes without knowledge of the historical vegetation state. Here we compare the distribution of tree- and grass-dominated biomes across Africa simulated using a dynamic global vegetation model (DGVM). We explicitly evaluate where and under what conditions multiple stable biome states are possible for current and projected future climates. Our simulation results show that multiple stable biomes states are possible for vast areas of tropical and subtropical Africa under current conditions. Widespread loss of the potential for multiple stable biomes states is projected in the 21st Century, driven by increasing atmospheric CO2 . Many sites where currently both tree-dominated and grass-dominated biomes are possible become deterministically tree-dominated. Regions with multiple stable biome states are widespread and require consideration when attempting to predict future vegetation changes. Testing for behaviour characteristic of systems with multiple stable equilibria, such as hysteresis and dependence on historical conditions, and the resulting uncertainty in simulated vegetation, will lead to improved projections of global change impacts. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Use of BIOME-BGC to simulate water and carbon fluxes within Mediterranean macchia

OpenAIRE

Chiesi M; Chirici G; Corona P; Duce P; Salvati R; Spano D; Vaccari FP; Maselli F

2012-01-01

The biogeochemical model BIOME-BGC is capable to estimate the main ecophysiological processes characterising all terrestrial ecosystems. To this aim it needs to be properly adapted to reproduce the behaviour of each biome type through a calibration phase. The aim of this paper is to adapt BIOME-BGC to reproduce the evapotranspiration (ET) and photosynthesis (GPP) of Mediterranean macchia spread all over Italy. Ten different sites were selected in the Centre-South of Italy and their gross prim...

Shift of biome patterns due to simulated climate variability and climate change

International Nuclear Information System (INIS)

Claussen, M.

1993-01-01

The variability of simulated equilibrium-response patterns of biomes caused by simulated climate variability and climate shift is analysed. This investigation is based on various realisations of simulated present-day climate and climate shift. It has been found that the difference between biomes computed from three 10-year climatologies and from the corresponding 30-year climatology, simulated by the Hamburg climate model at T21 resolution, amounts to approximately 6% of the total land area, Antarctica excluded. This difference is mainly due to differences in annual moisture availability and winter temperatures. When intercomparing biomes from the 10-year climatologies a 10% difference is seen, but there is no unique difference pattern. In contrast to the interdecadal variability, the shift of conditions favorable for biomes due to a shift in climate in the next 100 years, caused by an increase in sea-surface temperatures and atmospheric CO 2 , reveals a unique trend pattern. It turns out that the strongest and most significant signal is the north-east shift of conditions for boreal biomes. This signal is caused by an increase of annual temperature sums as well as mean temperatures of the coldest and warmest months. Trends in annual moisture availability are of secondary importance globally. Regionally, a decrease in water availability affects biomes in Central and East Europe and an increase of water availability leads to a potential increase in tropical rain forest. In total, all differences amount to roughly 30% of the total land surface, Antarctica excluded. (orig./KW)

User's Guide to Biome Information from the United States International Biological Program (IBP). First Edition.

Science.gov (United States)

Hinckley, A. Dexter; Haug, Peter T.

This publication is a guide to the biome research conducted under the International Biological Program. The guide lists biome researchers by interest and by biome as well as a central list. A site list, map, information sources section reporting abstracts, bibliographies, journals, books, evaluations, and data books are also included. Three…

Forgotten forests--issues and prospects in biome mapping using Seasonally Dry Tropical Forests as a case study.

Science.gov (United States)

Särkinen, Tiina; Iganci, João R V; Linares-Palomino, Reynaldo; Simon, Marcelo F; Prado, Darién E

2011-11-24

South America is one of the most species diverse continents in the world. Within South America diversity is not distributed evenly at both local and continental scales and this has led to the recognition of various areas with unique species assemblages. Several schemes currently exist which divide the continental-level diversity into large species assemblages referred to as biomes. Here we review five currently available biome maps for South America, including the WWF Ecoregions, the Americas basemap, the Land Cover Map of South America, Morrone's Biogeographic regions of Latin America, and the Ecological Systems Map. The comparison is performed through a case study on the Seasonally Dry Tropical Forest (SDTF) biome using herbarium data of habitat specialist species. Current biome maps of South America perform poorly in depicting SDTF distribution. The poor performance of the maps can be attributed to two main factors: (1) poor spatial resolution, and (2) poor biome delimitation. Poor spatial resolution strongly limits the use of some of the maps in GIS applications, especially for areas with heterogeneous landscape such as the Andes. Whilst the Land Cover Map did not suffer from poor spatial resolution, it showed poor delimitation of biomes. The results highlight that delimiting structurally heterogeneous vegetation is difficult based on remote sensed data alone. A new refined working map of South American SDTF biome is proposed, derived using the Biome Distribution Modelling (BDM) approach where georeferenced herbarium data is used in conjunction with bioclimatic data. Georeferenced specimen data play potentially an important role in biome mapping. Our study shows that herbarium data could be used as a way of ground-truthing biome maps in silico. The results also illustrate that herbarium data can be used to model vegetation maps through predictive modelling. The BDM approach is a promising new method in biome mapping, and could be particularly useful for mapping

Climate change in Inner Mongolia from 1955 to 2005-trends at regional, biome and local scales

Energy Technology Data Exchange (ETDEWEB)

Lu, N; Wilske, B; John, R; Chen, J [Department of Environmental Sciences, University of Toledo, Toledo, OH 43606 (United States); Ni, J, E-mail: nan.lu@utoledo.ed, E-mail: burkhard.wilske@utoledo.ed, E-mail: jni@ibcas.ac.c, E-mail: ranjeet.john@utoledo.ed, E-mail: jiquan.chen@utoledo.ed [Alfred Wegener Institute for Polar and Marine Research, Telegrafenberg A43, D-14473 Potsdam (Germany)

2009-10-15

This study investigated the climate change in Inner Mongolia based on 51 meteorological stations from 1955 to 2005. The climate data was analyzed at the regional, biome (i.e. forest, grassland and desert) and station scales, with the biome scale as our primary focus. The climate records showed trends of warmer and drier conditions in the region. The annual daily mean, maximum and minimum temperature increased whereas the diurnal temperature range (DTR) decreased. The decreasing trend of annual precipitation was not significant. However, the vapor pressure deficit (VPD) increased significantly. On the decadal scale, the warming and drying trends were more significant in the last 30 years than the preceding 20 years. The climate change varied among biomes, with more pronounced changes in the grassland and the desert biomes than in the forest biome. DTR and VPD showed the clearest inter-biome gradient from the lowest rate of change in the forest biome to the highest rate of change in the desert biome. The rates of change also showed large variations among the individual stations. Our findings correspond with the IPCC predictions that the future climate will vary significantly by location and through time, suggesting that adaptation strategies also need to be spatially viable.

Climate change in Inner Mongolia from 1955 to 2005-trends at regional, biome and local scales

International Nuclear Information System (INIS)

Lu, N; Wilske, B; John, R; Chen, J; Ni, J

2009-01-01

This study investigated the climate change in Inner Mongolia based on 51 meteorological stations from 1955 to 2005. The climate data was analyzed at the regional, biome (i.e. forest, grassland and desert) and station scales, with the biome scale as our primary focus. The climate records showed trends of warmer and drier conditions in the region. The annual daily mean, maximum and minimum temperature increased whereas the diurnal temperature range (DTR) decreased. The decreasing trend of annual precipitation was not significant. However, the vapor pressure deficit (VPD) increased significantly. On the decadal scale, the warming and drying trends were more significant in the last 30 years than the preceding 20 years. The climate change varied among biomes, with more pronounced changes in the grassland and the desert biomes than in the forest biome. DTR and VPD showed the clearest inter-biome gradient from the lowest rate of change in the forest biome to the highest rate of change in the desert biome. The rates of change also showed large variations among the individual stations. Our findings correspond with the IPCC predictions that the future climate will vary significantly by location and through time, suggesting that adaptation strategies also need to be spatially viable.

Pressure tuning of the electrical transport properties of the Weyl semimetal NbP

Energy Technology Data Exchange (ETDEWEB)

Reis, Ricardo dos; Ajeesh, M.O.; Sun, Yan; Shekhar, Chandra; Schmidt, Marcus; Felser, Claudia; Yan, Binghai; Nicklas, Michael [Max Planck Institute for Chemical Physics of Solids, Dresden (Germany)

2016-07-01

Recently enormous attention has been given to a class of material called Weyl semimetal (WSM) due to the prediction of many exotic phenomena, in particular exceptional transport properties, making these systems not only interesting for fundamental research, but also promising materials for novel applications. WSM can be viewed as the hybrid of 3D graphene and topological insulators. The band crossing point, the so-called Weyl point, acts as a magnetic monopole (a singular point of Berry curvature) in momentum space, which always comes in a pairs. If the time-reversal and inversion symmetries are respected, a pair of Weyl points is degenerate in energy, forming another topological phase called Dirac semimetal. Owing this complex band structure the details of the electronic structure can play a significant role in the electrical transport properties of these materials. In this context, external pressure is an important control parameter to effectively tune lattice structures and the corresponding electronic states in a systematic fashion, avoiding the complexity brought by chemical doping. Here, we present a high pressure study of the magnetotransport properties of the Weyl semimetal NbP, which are particularly important to explore novel phenomena and understand the physics behind.

S2Biom database with logistical components of the biomass value chain

NARCIS (Netherlands)

Annevelink, E.; Groot, de H.L.E.; Shah, N.; Giarola, S.; Pantaleo, M.; Anttila, P.; Vis, Martijn; Raa, te Rik; Berg, van den Douwe; Gabrielle, B.

2015-01-01

The S2Biom project (www.s2biom.eu) - Delivery of sustainable supply of non-food biomass to support
a resource-efficient Bioeconomy in Europe - supports sustainable delivery chains of non-food biomass feedstock.
This poses a logistical challenge because the quality and handling

Expanding the global network of protected areas to save the imperiled mediterranean biome.

Science.gov (United States)

Underwood, Emma C; Klausmeyer, Kirk R; Cox, Robin L; Busby, Sylvia M; Morrison, Scott A; Shaw, M Rebecca

2009-02-01

: Global goals established by the Convention on Biological Diversity stipulate that 10% of the world's ecological regions must be effectively conserved by 2010. To meet that goal for the mediterranean biome, at least 5% more land must be formally protected over the next few years. Although global assessments identify the mediterranean biome as a priority, without biologically meaningful analysis units, finer-resolution data, and corresponding prioritization analysis, future conservation investments could lead to more area being protected without increasing the representation of unique mediterranean ecosystems. We used standardized analysis units and six potential natural vegetation types stratified by 3 elevation zones in a global gap analysis that systematically explored conservation priorities across the mediterranean biome. The highest levels of protection were in Australia, South Africa, and California-Baja California (from 9-11%), and the lowest levels of protection were in Chile and the mediterranean Basin (biome only one of the six vegetation types--mediterranean shrubland--exceeded 10% protection. The remaining vegetation types--grassland, scrub, succulent dominated, woodland, and forest--each had biome, we identified biodiversity assemblages with 30% conversion and suggest that these assemblages be elevated to high-priority status in future conservation efforts.

Forgotten forests - issues and prospects in biome mapping using Seasonally Dry Tropical Forests as a case study

Directory of Open Access Journals (Sweden)

Särkinen Tiina

2011-11-01

Full Text Available Abstract Background South America is one of the most species diverse continents in the world. Within South America diversity is not distributed evenly at both local and continental scales and this has led to the recognition of various areas with unique species assemblages. Several schemes currently exist which divide the continental-level diversity into large species assemblages referred to as biomes. Here we review five currently available biome maps for South America, including the WWF Ecoregions, the Americas basemap, the Land Cover Map of South America, Morrone's Biogeographic regions of Latin America, and the Ecological Systems Map. The comparison is performed through a case study on the Seasonally Dry Tropical Forest (SDTF biome using herbarium data of habitat specialist species. Results Current biome maps of South America perform poorly in depicting SDTF distribution. The poor performance of the maps can be attributed to two main factors: (1 poor spatial resolution, and (2 poor biome delimitation. Poor spatial resolution strongly limits the use of some of the maps in GIS applications, especially for areas with heterogeneous landscape such as the Andes. Whilst the Land Cover Map did not suffer from poor spatial resolution, it showed poor delimitation of biomes. The results highlight that delimiting structurally heterogeneous vegetation is difficult based on remote sensed data alone. A new refined working map of South American SDTF biome is proposed, derived using the Biome Distribution Modelling (BDM approach where georeferenced herbarium data is used in conjunction with bioclimatic data. Conclusions Georeferenced specimen data play potentially an important role in biome mapping. Our study shows that herbarium data could be used as a way of ground-truthing biome maps in silico. The results also illustrate that herbarium data can be used to model vegetation maps through predictive modelling. The BDM approach is a promising new method in

Forgotten forests - issues and prospects in biome mapping using Seasonally Dry Tropical Forests as a case study

Science.gov (United States)

2011-01-01

Background South America is one of the most species diverse continents in the world. Within South America diversity is not distributed evenly at both local and continental scales and this has led to the recognition of various areas with unique species assemblages. Several schemes currently exist which divide the continental-level diversity into large species assemblages referred to as biomes. Here we review five currently available biome maps for South America, including the WWF Ecoregions, the Americas basemap, the Land Cover Map of South America, Morrone's Biogeographic regions of Latin America, and the Ecological Systems Map. The comparison is performed through a case study on the Seasonally Dry Tropical Forest (SDTF) biome using herbarium data of habitat specialist species. Results Current biome maps of South America perform poorly in depicting SDTF distribution. The poor performance of the maps can be attributed to two main factors: (1) poor spatial resolution, and (2) poor biome delimitation. Poor spatial resolution strongly limits the use of some of the maps in GIS applications, especially for areas with heterogeneous landscape such as the Andes. Whilst the Land Cover Map did not suffer from poor spatial resolution, it showed poor delimitation of biomes. The results highlight that delimiting structurally heterogeneous vegetation is difficult based on remote sensed data alone. A new refined working map of South American SDTF biome is proposed, derived using the Biome Distribution Modelling (BDM) approach where georeferenced herbarium data is used in conjunction with bioclimatic data. Conclusions Georeferenced specimen data play potentially an important role in biome mapping. Our study shows that herbarium data could be used as a way of ground-truthing biome maps in silico. The results also illustrate that herbarium data can be used to model vegetation maps through predictive modelling. The BDM approach is a promising new method in biome mapping, and could be

The phylogeny and biogeography of Hakea (Proteaceae) reveals the role of biome shifts in a continental plant radiation.

Science.gov (United States)

Cardillo, Marcel; Weston, Peter H; Reynolds, Zoe K M; Olde, Peter M; Mast, Austin R; Lemmon, Emily M; Lemmon, Alan R; Bromham, Lindell

2017-08-01

The frequency of evolutionary biome shifts during diversification has important implications for our ability to explain geographic patterns of plant diversity. Recent studies present several examples of biome shifts, but whether frequencies of biome shifts closely reflect geographic proximity or environmental similarity of biomes remains poorly known. We explore this question by using phylogenomic methods to estimate the phylogeny of Hakea, a diverse Australian genus occupying a wide range of biomes. Model-based estimation of ancestral regions indicates that Hakea began diversifying in the Mediterranean biome of southern Australia in the Middle Eocene-Early Oligocene, and dispersed repeatedly into other biomes across the continent. We infer around 47 shifts between biomes. Frequencies of shifts between pairs of biomes are usually similar to those expected from their geographic connectedness or climatic similarity, but in some cases are substantially higher or lower than expected, perhaps reflecting how readily key physiological traits can be modified to adapt lineages to new environments. The history of frequent biome-shifting is reflected in the structure of present-day assemblages, which tend to be more phylogenetically diverse than null-model expectations. The case of Hakea demonstrates that the radiation of large plant clades across wide geographic areas need not be constrained by dispersal limitation or conserved adaptations to particular environments. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

The Use of Fire Radiative Power to Estimate the Biomass Consumption Coefficient for Temperate Grasslands in the Atlantic Forest Biome

Directory of Open Access Journals (Sweden)

Bibiana Salvador Cabral da Costa

Full Text Available Abstract Every year, many active fire spots are identified in the satellite images of the southern Brazilian grasslands in the Atlantic Forest biome and Pampa biome. Fire Radiative Power (FRP is a technique that uses remotely sensed data to quantify burned biomass. FRP measures the radiant energy released per time unit by burning vegetation. This study aims to use satellite and field data to estimate the biomass consumption rate and the biomass consumption coefficient for the southern Brazilian grasslands. Three fire points were identified in satellite FRP products. These data were combined with field data, collected through literature review, to calculate the biomass consumption coefficient. The type of vegetation is an important variable in the estimation of the biomass consumption coefficient. The biomass consumption rate was estimated to be 2.237 kg s-1 for the southern Brazilian grasslands in Atlantic Forest biome, and the biomass consumption coefficient was estimated to be 0.242 kg MJ-1.

Anthropogenic Biomes of the World, Version 2: 1700

Data.gov (United States)

National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1700 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

Anthropogenic Biomes of the World, Version 2: 1900

Data.gov (United States)

National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1900 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

Anthropogenic Biomes of the World, Version 2: 1800

Data.gov (United States)

National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 1800 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

Anthropogenic Biomes of the World, Version 2: 2000

Data.gov (United States)

National Aeronautics and Space Administration — The Anthropogenic Biomes of the World, Version 2: 2000 data set describes anthropogenic transformations within the terrestrial biosphere caused by sustained direct...

FIFE data analysis: Testing BIOME-BGC predictions for grasslands

Science.gov (United States)

Hunt, E. Raymond, Jr.

1994-01-01

The First International Satellite Land Surface Climatology Project (ISLSCP) Field Experiment (FIFE) was conducted in a 15 km by 15 km research area located 8 km south of Manhattan, Kansas. The site consists primarily of native tallgrass prairie mixed with gallery oak forests and croplands. The objectives of FIFE are to better understand the role of biology in controlling the interactions between the land and the atmosphere, and to determine the value of remotely sensed data for estimating climatological parameters. The goals of FIFE are twofold: the upscale integration of models, and algorithm development for satellite remote sensing. The specific objectives of the field campaigns carried out in 1987 and 1989 were the simultaneous acquisition of satellite, atmospheric, and surface data; and the understanding of the processes controlling surface energy and mass exchange. Collected data were used to study the dynamics of various ecosystem processes (photosynthesis, evaporation and transpiration, autotrophic and heterotrophic respiration, etc.). Modelling terrestrial ecosystems at scales larger than that of a homogeneous plot led to the development of simple, generalized models of biogeochemical cycles that can be accurately applied to different biomes through the use of remotely sensed data. A model was developed called BIOME-BGC (for BioGeochemical Cycles) from a coniferous forest ecosystem model, FOREST-BGC, where a biome is considered a combination of a life forms in a specified climate. A predominately C4-photosynthetic grassland is probably the most different from a coniferous forest possible, hence the FIFE site was an excellent study area for testing BIOME-BGC. The transition from an essentially one-dimensional calculation to three-dimensional, landscape scale simulations requires the introduction of such factors as meteorology, climatology, and geomorphology. By using remotely sensed geographic information data for important model inputs, process

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome.

Science.gov (United States)

McDonald, Daniel; Clemente, Jose C; Kuczynski, Justin; Rideout, Jai Ram; Stombaugh, Jesse; Wendel, Doug; Wilke, Andreas; Huse, Susan; Hufnagle, John; Meyer, Folker; Knight, Rob; Caporaso, J Gregory

2012-07-12

We present the Biological Observation Matrix (BIOM, pronounced "biome") format: a JSON-based file format for representing arbitrary observation by sample contingency tables with associated sample and observation metadata. As the number of categories of comparative omics data types (collectively, the "ome-ome") grows rapidly, a general format to represent and archive this data will facilitate the interoperability of existing bioinformatics tools and future meta-analyses. The BIOM file format is supported by an independent open-source software project (the biom-format project), which initially contains Python objects that support the use and manipulation of BIOM data in Python programs, and is intended to be an open development effort where developers can submit implementations of these objects in other programming languages. The BIOM file format and the biom-format project are steps toward reducing the "bioinformatics bottleneck" that is currently being experienced in diverse areas of biological sciences, and will help us move toward the next phase of comparative omics where basic science is translated into clinical and environmental applications. The BIOM file format is currently recognized as an Earth Microbiome Project Standard, and as a Candidate Standard by the Genomic Standards Consortium.

Constrained variability of modeled T:ET ratio across biomes

Science.gov (United States)

Fatichi, Simone; Pappas, Christoforos

2017-07-01

A large variability (35-90%) in the ratio of transpiration to total evapotranspiration (referred here as T:ET) across biomes or even at the global scale has been documented by a number of studies carried out with different methodologies. Previous empirical results also suggest that T:ET does not covary with mean precipitation and has a positive dependence on leaf area index (LAI). Here we use a mechanistic ecohydrological model, with a refined process-based description of evaporation from the soil surface, to investigate the variability of T:ET across biomes. Numerical results reveal a more constrained range and higher mean of T:ET (70 ± 9%, mean ± standard deviation) when compared to observation-based estimates. T:ET is confirmed to be independent from mean precipitation, while it is found to be correlated with LAI seasonally but uncorrelated across multiple sites. Larger LAI increases evaporation from interception but diminishes ground evaporation with the two effects largely compensating each other. These results offer mechanistic model-based evidence to the ongoing research about the patterns of T:ET and the factors influencing its magnitude across biomes.

Pollen-based biome reconstruction for southern Europe and Africa 18,000 yr BP

NARCIS (Netherlands)

Elenga, H; Peyron, O; Bonnefille, R; Jolly, D; Cheddadi, R; Guiot, J; Andrieu, [No Value; Bottema, S; Buchet, G; de Beaulieu, JL; Hamilton, AC; Maley, J; Marchant, R; Perez-Obiol, R; Reille, M; Riollet, G; Scott, L; Straka, H; Taylor, D; Van Campo, E; Vincens, A; Laarif, F; Jonson, H

Pollen data from 18,000 C-14 yr sp were compiled in order to reconstruct biome distributions at the last glacial maximum in southern Europe and Africa. Biome reconstructions were made using the objective biomization method applied to pollen counts using a complete list of dryland taxa wherever

Identification of biomes affected by marginal expansion of agricultural land use induced by increased crop consumption

DEFF Research Database (Denmark)

Kløverpris, Jesper Hedal

2009-01-01

to characterise these areas. The present study ascribes so-called biomes (natural potential vegetation) to the areas affected by agricultural expansion in order to provide a basis for assessing the environmental impacts from land use in the life cycle impact assessment (LCIA). The methodology builds...... on agricultural statistics and maps of global agricultural areas and the global distribution of biomes. The application of the method is illustrated with four examples. The results indicate that agricultural expansion on land suited for crop cultivation (cultivable land) typically affects forest biomes...... or potential grassland/steppe, whereas expansion on land suited for grazing but not for crop cultivation (grazable land) typically occurs on potential shrubland or a few other biomes depending on the region. Some uncertainty applies to the results but it is concluded that it is feasible to identify biomes...

改进Biome-BGC模型模拟哈佛森林地区水、碳通量%Simulation of water and carbon fluxes in Harvard forest area by using improved BiomeBGC model.

Institute of Scientific and Technical Information of China (English)

张廷龙; 孙睿; 胡波; 冯丽超; 张荣华

2011-01-01

Biome-BGC模型通过耦合植被、土壤与大气间的水分与CO2交换过程,实现植被生产力的模拟,但土壤水平衡模块的不够完善,导致在长时间无降水情况下植被生产力模拟存在较大误差.针对这一问题,本文对Biome-BGC模型中土壤水分胁迫气孔导度方程、蒸散计算公式及土壤水分流失过程等3方面进行了改进和调整,利用改进的Biome-BGC模型模拟美国哈佛森林地区蒸散、植被生产力,并与地面通量观测值进行了比较.结果表明,改进后模拟精度有明显的提高,蒸散、植被生态系统生产力(NEE)与观测值间的决定系数分别由0.483和0.658提高到0.617和O.813,蒸散逐年均方根误差平均下降了48.7％,NEE逐年误差平方和平均下降了39.8％.改进后的模型模拟结果更接近观测值.%Using Biome-BGC model can simulate vegetation productivity through the coupling of water and CO2 exchange processes between vegetation, soil and atmosphere, but the soil water balance module is not perfect enough, leading to a large deviation between simulated and observed values under condition of a long time no precipitation. Aiming at this problem, this paper improved and adjusted the equation of stomatal conductance stressed by soil water, the calculation formula of evapotranspiration, and the process of soil water loss in Biome-BGC model. Using this improved model, the evapotranspiration and vegetation productivity in Harvard Forest area were simulated, and compared with field observations. The accuracy of simulated results by the improved model enhanced obviously, with the evapotranspiration R between simulated and observed values increased from 0. 483 to 0. 617, NEE R2 increased from 0. 658 to 0. 813, root mean square error (RMSE) of annual evapotranspiration decreased averagely by 48. 7% , and annual sum squared error ( ASSE) of NEE decreased averagely by 39. 8% , which suggested that the simulated results by using the improved model

SENSITIVITY ANALYSIS OF BIOME-BGC MODEL FOR DRY TROPICAL FORESTS OF VINDHYAN HIGHLANDS, INDIA

OpenAIRE

M. Kumar; A. S. Raghubanshi

2012-01-01

A process-based model BIOME-BGC was run for sensitivity analysis to see the effect of ecophysiological parameters on net primary production (NPP) of dry tropical forest of India. The sensitivity test reveals that the forest NPP was highly sensitive to the following ecophysiological parameters: Canopy light extinction coefficient (k), Canopy average specific leaf area (SLA), New stem C : New leaf C (SC:LC), Maximum stomatal conductance (gs,max), C:N of fine roots (C:Nfr), All-sided to...

Consequences of biome depletion

International Nuclear Information System (INIS)

Salvucci, Emiliano

2013-01-01

The human microbiome is an integral part of the superorganism together with their host and they have co-evolved since the early days of the existence of the human species. The modification of the microbiome as a result changes in food and social habits of human beings throughout their life history has led to the emergence of many diseases. In contrast with the Darwinian view of nature of selfishness and competence, new holistic approaches are rising. Under these views, the reconstitution of the microbiome comes out as a fundamental therapy for emerging diseases related to biome depletion.

Structural characterization of vegetation in the fynbos biome

CSIR Research Space (South Africa)

Campbell, BM

1981-08-01

Full Text Available A proposed system for the standardization of descriptive terminology for structural characterization of vegetation in the Fynbos Biome is presented in tabular form. Specific applications of the system are described and illustrations of some...

Determining the resilience of carbon dynamics in semi-arid biomes of the Southwestern US to severe drought and altered rainfall patterns

Science.gov (United States)

Litvak, M. E.; Krofcheck, D. J.; Hilton, T. W.; Fox, A. M.; Osuna, J. L.

2011-12-01

Water is critically important for biotic processes in semi-arid ecosystems and 2011 is developing as one of the most severe drought years on record for many parts of the Southwestern US. To quantify the impact of this severe drought on regional carbon and energy balance, we need a more detailed understanding of how water limitation alters ecosystem processes across a range of semi-arid biomes. We quantified the impact of severe drought and changes in both the quantity and distribution of precipitation on ecosystem biotic structure and function across the range of biomes represented in the NM elevation gradient network (desert grassland, creosote shrubland, juniper savanna, piñon-juniper woodland, ponderosa pine forest and subalpine mixed conifer forest). We compared how daily, seasonal and annual carbon and energy balance and their components in each of these biomes respond to changes in rainfall patterns using continuous measurements of carbon, water and energy exchange and associated measurements in each of these biomes during a 5 year period (2006-2011) that included a severe drought, and large variability in both winter precipitation and the timing and intensity of the monsoon. To understand the underlying mechanisms, we used time series of radiation absorbed by vegetation, surface albedo, soil moisture storage, phenology, gross primary productivity (GPP), ecosystem respiration (Re), and WorldView-2 images acquired pre- and post-monsoon in each of these biomes. In all of the biomes except the desert grassland site, the strength and timing of both winter and monsoon precipitation are important controls over carbon and energy dynamics in this region, though we see site-specific sensitivities across the elevation gradient. Over the past 5 years, carbon dynamics in the desert grassland site appears to be decoupled from winter precipitation. In addition, carbon dynamics in disturbed grassland and pinon-juniper ecosystems were more sensitive to severe drought than

Climate and litter quality differently modulate the effects of soil fauna on litter decomposition across biomes.

Science.gov (United States)

García-Palacios, Pablo; Maestre, Fernando T; Kattge, Jens; Wall, Diana H

2013-08-01

Climate and litter quality have been identified as major drivers of litter decomposition at large spatial scales. However, the role played by soil fauna remains largely unknown, despite its importance for litter fragmentation and microbial activity. We synthesised litterbag studies to quantify the effect sizes of soil fauna on litter decomposition rates at the global and biome scales, and to assess how climate, litter quality and soil fauna interact to determine such rates. Soil fauna consistently enhanced litter decomposition at both global and biome scales (average increment ~ 37%). [corrected]. However, climate and litter quality differently modulated the effects of soil fauna on decomposition rates between biomes, from climate-driven biomes to those where climate effects were mediated by changes in litter quality. Our results advocate for the inclusion of biome-specific soil fauna effects on litter decomposition as a mean to reduce the unexplained variation in large-scale decomposition models. © 2013 John Wiley & Sons Ltd/CNRS.

Federal Conservation Units in Brazil: The Situation of Biomes and Regions

Directory of Open Access Journals (Sweden)

Eduardo Pacca Luna Mattar

2018-03-01

Full Text Available ABSTRACT Federal conservation units (FCU are areas legally established by the government, in order to meet the needs of protection and sustainable exploitation of biodiversity. A way to ensure the efficiency of public management is to systematize data. Therefore, the present study grouped and analyzed public data about FCU. Brazil has 309 federal conservation units, which represent 9.06% of the national territory and 45305 residents households. The Northern Region covers 84.80% of these families and 79.20% of its area belongs to FCU. The Amazônia biome has 14.57% of its territory occupied by FCU; on the other hand, Pantanal has only 0.98% of its area protected. There is a higher concentration of public agents in the FCU of the Southeastern region and in the Mata Atlântica biome. The analysis of this information reveals significant differences between the biomes and the federation units, a fact that reflects the importance of the organization of public data.

La filatelia biomédica

Directory of Open Access Journals (Sweden)

Emilio J.A. Roldán

2011-02-01

Full Text Available La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ayuda de las víctimas del terremoto de San Juan. Florentino Ameghino es el primer científico incluido en 1954, y en 1967 se edita un sello conmemorativo de la Dra. Cecilia Grierson. La filatelia argentina luego reconoce varios de nuestros científicos y médicos, congresos, universidades, campañas sanitarias, temas de odontología, farmacia, enfermería y otros, generando un amplio material filatélico en reconocimiento del valor social que la ciencia biomédica argentina ha logrado en el contexto propio e internacional. Posiblemente sea un científico, el Dr. Bernardo Houssay, uno de los argentinos más veces editado en distintos sellos postales de la filatelia mundial.

Simulating carbon and water fluxes at Arctic and boreal ecosystems in Alaska by optimizing the modified BIOME-BGC with eddy covariance data

Science.gov (United States)

Ueyama, M.; Kondo, M.; Ichii, K.; Iwata, H.; Euskirchen, E. S.; Zona, D.; Rocha, A. V.; Harazono, Y.; Nakai, T.; Oechel, W. C.

2013-12-01

To better predict carbon and water cycles in Arctic ecosystems, we modified a process-based ecosystem model, BIOME-BGC, by introducing new processes: change in active layer depth on permafrost and phenology of tundra vegetation. The modified BIOME-BGC was optimized using an optimization method. The model was constrained using gross primary productivity (GPP) and net ecosystem exchange (NEE) at 23 eddy covariance sites in Alaska, and vegetation/soil carbon from a literature survey. The model was used to simulate regional carbon and water fluxes of Alaska from 1900 to 2011. Simulated regional fluxes were validated with upscaled GPP, ecosystem respiration (RE), and NEE based on two methods: (1) a machine learning technique and (2) a top-down model. Our initial simulation suggests that the original BIOME-BGC with default ecophysiological parameters substantially underestimated GPP and RE for tundra and overestimated those fluxes for boreal forests. We will discuss how optimization using the eddy covariance data impacts the historical simulation by comparing the new version of the model with simulated results from the original BIOME-BGC with default ecophysiological parameters. This suggests that the incorporation of the active layer depth and plant phenology processes is important to include when simulating carbon and water fluxes in Arctic ecosystems.

Two New Species and New Occurrences of Syneches Walker for Brazilian Biome of Caatinga (Diptera: Hybotidae: Hybotinae).

Science.gov (United States)

Soares, M M M; Ale-Rocha, R

2018-03-13

Syneches from Brazilian biome of Caatinga were studied, two new species are described, Syneches atratus sp. nov. and Syneches limeirai sp. nov., and three species, Syneches annulipes Bezzi, 1909, Syneches moraballi Smith, 1963, and Syneches rafaeli Ale-Rocha & Vieira, 2008, are recorded for the biome. An identification key for the species of Syneches from Caatinga biome is provided.

Development of the BIOME-BGC model for the simulation of managed Moso bamboo forest ecosystems.

Science.gov (United States)

Mao, Fangjie; Li, Pingheng; Zhou, Guomo; Du, Huaqiang; Xu, Xiaojun; Shi, Yongjun; Mo, Lufeng; Zhou, Yufeng; Tu, Guoqing

2016-05-01

Numerical models are the most appropriate instrument for the analysis of the carbon balance of terrestrial ecosystems and their interactions with changing environmental conditions. The process-based model BIOME-BGC is widely used in simulation of carbon balance within vegetation, litter and soil of unmanaged ecosystems. For Moso bamboo forests, however, simulations with BIOME-BGC are inaccurate in terms of the growing season and the carbon allocation, due to the oversimplified representation of phenology. Our aim was to improve the applicability of BIOME-BGC for managed Moso bamboo forest ecosystem by implementing several new modules, including phenology, carbon allocation, and management. Instead of the simple phenology and carbon allocation representations in the original version, a periodic Moso bamboo phenology and carbon allocation module was implemented, which can handle the processes of Moso bamboo shooting and high growth during "on-year" and "off-year". Four management modules (digging bamboo shoots, selective cutting, obtruncation, fertilization) were integrated in order to quantify the functioning of managed ecosystems. The improved model was calibrated and validated using eddy covariance measurement data collected at a managed Moso bamboo forest site (Anji) during 2011-2013 years. As a result of these developments and calibrations, the performance of the model was substantially improved. Regarding the measured and modeled fluxes (gross primary production, total ecosystem respiration, net ecosystem exchange), relative errors were decreased by 42.23%, 103.02% and 18.67%, respectively. Copyright © 2015 Elsevier Ltd. All rights reserved.

BIOME: A scientific data archive search-and-order system using browser-aware, dynamic pages

Science.gov (United States)

Jennings, S. V.; Yow, T. G.; Ng, V. W.

1997-01-01

The Oak Ridge National Laboratory's (ORNL) Distributed Active Archive Center (DAAC) is a data archive and distribution center for the National Air and Space Administration's (NASA) Earth Observing System Data and Information System (EOSDIS). Both the Earth Observing System (EOS) and EOSDIS are components of NASA's contribution to the US Global Change Research Program through its Mission to Planet Earth Program. The ORNL DAAC provides access to data used in ecological and environmental research such as global change, global warming, and terrestrial ecology. Because of its large and diverse data holdings, the challenge for the ORNL DAAC is to help users find data of interest from the hundreds of thousands of files available at the DAAC without overwhelming them. Therefore, the ORNL DAAC has developed the Biogeochemical Information Ordering Management Environment (BIOME), a customized search and order system for the World Wide Web (WWW). BIOME is a public system located at http://www-eosdis. ornl.gov/BIOME/biome.html.

Biome Is Where the Art Is

Science.gov (United States)

Gooden, Kelly

2005-01-01

The author is surprised every year when fifth-grade students react to the study of biomes as if they've never given any thought to the differences across parts of the world. Sure, they've all heard of the tropical rain forest and the desert, but it seems as though they think the rest of the world is just some undefined area with climate, animals,…

Where do the treeless tundra areas of northern highlands fit in the global biome system: toward an ecologically natural subdivision of the tundra biome.

Science.gov (United States)

Virtanen, Risto; Oksanen, Lauri; Oksanen, Tarja; Cohen, Juval; Forbes, Bruce C; Johansen, Bernt; Käyhkö, Jukka; Olofsson, Johan; Pulliainen, Jouni; Tømmervik, Hans

2016-01-01

According to some treatises, arctic and alpine sub-biomes are ecologically similar, whereas others find them highly dissimilar. Most peculiarly, large areas of northern tundra highlands fall outside of the two recent subdivisions of the tundra biome. We seek an ecologically natural resolution to this long-standing and far-reaching problem. We studied broad-scale patterns in climate and vegetation along the gradient from Siberian tundra via northernmost Fennoscandia to the alpine habitats of European middle-latitude mountains, as well as explored those patterns within Fennoscandian tundra based on climate-vegetation patterns obtained from a fine-scale vegetation map. Our analyses reveal that ecologically meaningful January-February snow and thermal conditions differ between different types of tundra. High precipitation and mild winter temperatures prevail on middle-latitude mountains, low precipitation and usually cold winters prevail on high-latitude tundra, and Scandinavian mountains show intermediate conditions. Similarly, heath-like plant communities differ clearly between middle latitude mountains (alpine) and high-latitude tundra vegetation, including its altitudinal extension on Scandinavian mountains. Conversely, high abundance of snowbeds and large differences in the composition of dwarf shrub heaths distinguish the Scandinavian mountain tundra from its counterparts in Russia and the north Fennoscandian inland. The European tundra areas fall into three ecologically rather homogeneous categories: the arctic tundra, the oroarctic tundra of northern heights and mountains, and the genuinely alpine tundra of middle-latitude mountains. Attempts to divide the tundra into two sub-biomes have resulted in major discrepancies and confusions, as the oroarctic areas are included in the arctic tundra in some biogeographic maps and in the alpine tundra in others. Our analyses based on climate and vegetation criteria thus seem to resolve the long-standing biome

The Biological Observation Matrix (BIOM format or: how I learned to stop worrying and love the ome-ome

Directory of Open Access Journals (Sweden)

McDonald Daniel

2012-07-01

Full Text Available Abstract Background We present the Biological Observation Matrix (BIOM, pronounced “biome” format: a JSON-based file format for representing arbitrary observation by sample contingency tables with associated sample and observation metadata. As the number of categories of comparative omics data types (collectively, the “ome-ome” grows rapidly, a general format to represent and archive this data will facilitate the interoperability of existing bioinformatics tools and future meta-analyses. Findings The BIOM file format is supported by an independent open-source software project (the biom-format project, which initially contains Python objects that support the use and manipulation of BIOM data in Python programs, and is intended to be an open development effort where developers can submit implementations of these objects in other programming languages. Conclusions The BIOM file format and the biom-format project are steps toward reducing the “bioinformatics bottleneck” that is currently being experienced in diverse areas of biological sciences, and will help us move toward the next phase of comparative omics where basic science is translated into clinical and environmental applications. The BIOM file format is currently recognized as an Earth Microbiome Project Standard, and as a Candidate Standard by the Genomic Standards Consortium.

An intercomparison of biogenic emissions estimates from BEIS2 and BIOME: Reconciling the differences

Energy Technology Data Exchange (ETDEWEB)

Wilkinson, J.G. [Alpine Geophysics, Pittsburgh, PA (United States); Emigh, R.A. [Alpine Geophysics, Boulder, CO (United States); Pierce, T.E. [Atmospheric Characterization and Modeling Division/NOAA, Research Triangle Park, NC (United States)

1996-12-31

Biogenic emissions play a critical role in urban and regional air quality. For instance, biogenic emissions contribute upwards of 76% of the daily hydrocarbon emissions in the Atlanta, Georgia airshed. The Biogenic Emissions Inventory System-Version 2.0 (BEIS2) and the Biogenic Model for Emissions (BIOME) are two models that compute biogenic emissions estimates. BEIS2 is a FORTRAN-based system, and BIOME is an ARC/INFO{reg_sign} - and SAS{reg_sign}-based system. Although the technical formulations of the models are similar, the models produce different biogenic emissions estimates for what appear to be essentially the same inputs. The goals of our study are the following: (1) Determine why BIOME and BEIS2 produce different emissions estimates; (2) Attempt to understand the impacts that the differences have on the emissions estimates; (3) Reconcile the differences where possible; and (4) Present a framework for the use of BEIS2 and BIOME. In this study, we used the Coastal Oxidant Assessment for Southeast Texas (COAST) biogenics data which were supplied to us courtesy of the Texas Natural Resource Conservation Commission (TNRCC), and we extracted the BEIS2 data for the same domain. We compared the emissions estimates of the two models using their respective data sets BIOME Using TNRCC data and BEIS2 using BEIS2 data.

Effects of climate and lifeform on dry matter yield (epsilon) from simulations using BIOME BGC. [ecosystem process model for vegetation biomass production using daily absorbed photosynthetically active radiation

Science.gov (United States)

Hunt, E. R., Jr.; Running, Steven W.

1992-01-01

An ecosystem process simulation model, BIOME-BGC, is used in a sensitivity analysis to determine the factors that may cause the dry matter yield (epsilon) and annual net primary production to vary for different ecosystems. At continental scales, epsilon is strongly correlated with annual precipitation. At a single location, year-to-year variation in net primary production (NPP) and epsilon is correlated with either annual precipitation or minimum air temperatures. Simulations indicate that forests have lower epsilon than grasslands. The most sensitive parameter affecting forest epsilon is the total amount of living woody biomass, which affects NPP by increasing carbon loss by maintenance respiration. A global map of woody biomass should significantly improve estimates of global NPP using remote sensing.

Alendronate augments interleukin-1{beta} release from macrophages infected with periodontal pathogenic bacteria through activation of caspase-1

Energy Technology Data Exchange (ETDEWEB)

Xue, Deng; Tamai, Riyoko [Division of Oral Bacteriology, Department of Oral Medical Science, Ohu University School of Dentistry, 31-1 Misumido, Tomitamachi, Koriyama, Fukushima 963-8611 (Japan); Endo, Yasuo [Department of Molecular Regulation, Graduate School of Dentistry, Tohoku University, 4-1 Seiryo-machi, Aoba-ku, Sendai 980-8575 (Japan); Kiyoura, Yusuke [Division of Oral Bacteriology, Department of Oral Medical Science, Ohu University School of Dentistry, 31-1 Misumido, Tomitamachi, Koriyama, Fukushima 963-8611 (Japan)

2009-02-15

Nitrogen-containing bisphosphonates (NBPs) are anti-bone-resorptive drugs with inflammatory side effects that include osteomyelitis and osteonecrosis of the jaw. Oral bacteria have been considered to be a trigger for these NBP-associated jaw bone diseases. The present study examined the effects of alendronate (a typical NBP) and clodronate (a non-NBP) on the production of proinflammatory cytokines by macrophages infected with Porphyromonas gingivalis and Tannerella forsythia, which are important pathogens of periodontal diseases. Pretreatment with alendronate augmented IL-1{beta}, but not TNF{alpha}, production by macrophages infected with P. gingivalis or T. forsythia. This augmentation of IL-1{beta} production was inhibited by clodronate. Furthermore, caspase-1, a promoter of IL-1{beta} production, was activated by treatment with alendronate, and caspase-1 inhibitor reduced the production of IL-1{beta} induced by alendronate and P. gingivalis. These results suggest that NBPs augment periodontal pathogenic bacteria-induced IL-1{beta} release via caspase-1 activation, and this phenomenon may contribute to the development of NBP-associated inflammatory side effects including jaw osteomyelitis. Co-treatment with clodronate may prevent and/or reduce these inflammatory effects induced by NBPs.

Alendronate augments interleukin-1β release from macrophages infected with periodontal pathogenic bacteria through activation of caspase-1

International Nuclear Information System (INIS)

Deng Xue; Tamai, Riyoko; Endo, Yasuo; Kiyoura, Yusuke

2009-01-01

Nitrogen-containing bisphosphonates (NBPs) are anti-bone-resorptive drugs with inflammatory side effects that include osteomyelitis and osteonecrosis of the jaw. Oral bacteria have been considered to be a trigger for these NBP-associated jaw bone diseases. The present study examined the effects of alendronate (a typical NBP) and clodronate (a non-NBP) on the production of proinflammatory cytokines by macrophages infected with Porphyromonas gingivalis and Tannerella forsythia, which are important pathogens of periodontal diseases. Pretreatment with alendronate augmented IL-1β, but not TNFα, production by macrophages infected with P. gingivalis or T. forsythia. This augmentation of IL-1β production was inhibited by clodronate. Furthermore, caspase-1, a promoter of IL-1β production, was activated by treatment with alendronate, and caspase-1 inhibitor reduced the production of IL-1β induced by alendronate and P. gingivalis. These results suggest that NBPs augment periodontal pathogenic bacteria-induced IL-1β release via caspase-1 activation, and this phenomenon may contribute to the development of NBP-associated inflammatory side effects including jaw osteomyelitis. Co-treatment with clodronate may prevent and/or reduce these inflammatory effects induced by NBPs

Parameter sensitivity of simulating net primary productivity of Larix olgensis forest based on BIOME-BGC model%基于BIOME-BGC模型的长白落叶松林净初级生产力模拟参数敏感性

Institute of Scientific and Technical Information of China (English)

何丽鸿; 王海燕; 雷相东

2016-01-01

基于植被生理生态过程的模型包含较多参数,合理的参数取值能够极大地提高模型的模拟能力.参数敏感性分析可以全面分析模型参数对模拟结果的影响程度,在筛选模型敏感参数过程中起到重要作用.本研究以模拟吉林省汪清林业局长白落叶松林净初级生产力(NPP)为例,分析了BIOME-BGC模型的参数敏感性.首先利用样地实测NPP数据与模拟值进行对比分析,检验模型对长白落叶松林NPP的模拟能力;然后利用Morris法和EFAST法筛选出BIOME-BGC模型中对长白落叶松林NPP影响较大的敏感参数.在此基础上,通过EFAST法对所有筛选出的参数进行定量的敏感性分析,计算了敏感参数的全局敏感性指数、一阶敏感性指数和二阶敏感性指数.结果表明:BIOME-BGC模型能够较好地模拟研究区内长白落叶松林NPP的变化趋势;Morris法可以在样本量较少的情况下实现对BIOME-BGC模型敏感参数的筛选,面EFAST法可以定量分析BIOME-BGC模型中单个参数以及不同参数之间交互作用对模拟结果的影响程度;BIOME-BGC模型中对长白落叶松林NPP影响较大的敏感参数为新生茎与叶片的碳分配比和叶片碳氮比,且二者之间的交互作用明显大于其他参数之间的交互作用.

Overview on Environmental Comprehensive Management System Established in Imitation of Biome

Institute of Scientific and Technical Information of China (English)

李如燕; 孙可伟

2004-01-01

Environmental comprehensive management system, called "the bionic community", can be established in imitation of biome, which can transform the wastes generated in a certain field into the raw materials of other field. The establishment of the bionic community includes two aspects, i.e. , the matching technique and the management system. The main matching technique is the preparation of composite materials made of various wastes.This new kind of material can be divided into four types: polymer matrix, silicate matrix, metal matrix and carbon matrix (or ceramic matrix). The environmental comprehensive management system is formed by organizing a transtrades joint-management business entity with the products of composite material made of wastes at the core.

Evolutionary biology and anthropology suggest biome reconstitution as a necessary approach toward dealing with immune disorders.

Science.gov (United States)

Parker, William; Ollerton, Jeff

2013-01-01

Industrialized society currently faces a wide range of non-infectious, immune-related pandemics. These pandemics include a variety of autoimmune, inflammatory and allergic diseases that are often associated with common environmental triggers and with genetic predisposition, but that do not occur in developing societies. In this review, we briefly present the idea that these pandemics are due to a limited number of evolutionary mismatches, the most damaging being 'biome depletion'. This particular mismatch involves the loss of species from the ecosystem of the human body, the human biome, many of which have traditionally been classified as parasites, although some may actually be commensal or even mutualistic. This view, evolved from the 'hygiene hypothesis', encompasses a broad ecological and evolutionary perspective that considers host-symbiont relations as plastic, changing through ecological space and evolutionary time. Fortunately, this perspective provides a blueprint, termed 'biome reconstitution', for disease treatment and especially for disease prevention. Biome reconstitution includes the controlled and population-wide reintroduction (i.e. domestication) of selected species that have been all but eradicated from the human biome in industrialized society and holds great promise for the elimination of pandemics of allergic, inflammatory and autoimmune diseases.

Evolutionary history of a keystone pollinator parallels the biome occupancy of angiosperms in the Greater Cape Floristic Region.

Science.gov (United States)

de Jager, Marinus L; Ellis, Allan G

2017-02-01

The Greater Cape Floristic Region (GCFR) in South Africa has been extensively investigated for its phenomenal angiosperm diversity. A key emergent pattern is the occurrence of older plant lineages in the southern Fynbos biome and younger lineages in the northern Succulent Karoo biome. We know practically nothing, however, about the evolutionary history of the animals that pollinate this often highly-specialized flora. In this study, we explore the evolutionary history of an important GCFR fly pollinator, Megapalpus capensis, and ask whether it exhibits broadly congruent genetic structuring and timing of diversification to flowering plants within these biomes. We find that the oldest M. capensis lineages originated in Fynbos during the Miocene, while younger Succulent Karoo lineages diverged in the Pliocene and correspond to the proposed age of this recent biome. A strong signature of population expansion is also recovered for flies in this arid biome, consistent with recent colonization. Our first investigation into the evolutionary history of GCFR pollinators thus supports a recent origin of the SK biome, as inferred from angiosperm phylogenies, and suggests that plants and pollinators may have co-diverged within this remarkable area. Copyright © 2016 Elsevier Inc. All rights reserved.

Signatures of Fermi Arcs in the Quasiparticle Interferences of the Weyl Semimetals TaAs and NbP.

Science.gov (United States)

Chang, Guoqing; Xu, Su-Yang; Zheng, Hao; Lee, Chi-Cheng; Huang, Shin-Ming; Belopolski, Ilya; Sanchez, Daniel S; Bian, Guang; Alidoust, Nasser; Chang, Tay-Rong; Hsu, Chuang-Han; Jeng, Horng-Tay; Bansil, Arun; Lin, Hsin; Hasan, M Zahid

2016-02-12

The recent discovery of the first Weyl semimetal in TaAs provides the first observation of a Weyl fermion in nature. Such a topological semimetal features a novel type of anomalous surface state, the Fermi arc, which connects a pair of Weyl nodes through the boundary of the crystal. Here, we present theoretical calculations of the quasiparticle interference (QPI) patterns that arise from the surface states including the topological Fermi arcs in the Weyl semimetals TaAs and NbP. Most importantly, we discover that the QPI exhibits termination points that are fingerprints of the Weyl nodes in the interference pattern. Our results, for the first time, propose a universal interference signature of the topological Fermi arcs in TaAs, which is fundamental for scanning tunneling microscope (STM) measurements on this prototypical Weyl semimetal compound. More generally, our work provides critical guideline and methodology for STM studies on new Weyl semimetals. Further, the scattering channels revealed by our QPIs are broadly relevant to surface transport and device applications based on Weyl semimetals.

NDVI and meteorological data as indicators of the Pampa biome natural grasslands growth

Directory of Open Access Journals (Sweden)

Denise Cybis Fontana

2018-04-01

Full Text Available ABSTRACT The present study aimed to characterize the dynamics of NDVI and meteorological conditions, relating both to the annual dynamics of biomass accumulation in natural pastures of the Pampa biome as a way of subsidizing growth modeling. Forage accumulation rate data from a long-term experiment, NDVI data from the MODIS images, and meteorological data measured at the surface were used. We verify that the agrometeorological element associated to the accumulation of forage in the natural grasslands is different according to the season, which is typical of the subtropical climate. Winter is the critical season for livestock production due to the lower forage accumulation rate and lower values of NDVI, conditioned by the decrease of solar radiation and air temperature. In the summer, the limiting factor to forage accumulation is the hydric condition. It was also verified that the variability in the growth of grasslands can be associated with the ENSO phenomenon, being the El Niño favorable and the La Niña unfavorable, especially in the spring-summer period. Considering the verified associations, spectral indices combined with agrometeorological elements are recommended to the adjustment of models of forage accumulation in the Pampa biome natural grasslands.

Future changes in South American biomass distributions, biome distributions and plant trait spectra is dependent on applied atmospheric forcings.

Science.gov (United States)

Langan, Liam; Scheiter, Simon; Higgins, Steven

2017-04-01

It remains poorly understood why the position of the forest-savanna biome boundary, in a domain defined by precipitation and temperature, differs in South America, Africa and Australia. Process based Dynamic Global Vegetation Models (DGVMs) are a valuable tool to investigate the determinants of vegetation distributions, however, many DGVMs fail to predict the spatial distribution or indeed presence of the South American savanna biome. Evidence suggests fire plays a significant role in mediating forest-savanna biome boundaries, however, fire alone appear to be insufficient to predict these boundaries in South America. We hypothesize that interactions between precipitation, constraints on tree rooting depth and fire, affect the probability of savanna occurrence and the position of the savanna-forest boundary. We tested our hypotheses at tropical forest and savanna sites in Brazil and Venezuela using a novel DGVM, aDGVM2, which allows plant trait spectra, constrained by trade-offs between traits, to evolve in response to abiotic and biotic conditions. Plant hydraulics is represented by the cohesion-tension theory, this allowed us to explore how soil and plant hydraulics control biome distributions and plant traits. The resulting community trait distributions are emergent properties of model dynamics. We showed that across much of South America the biome state is not determined by climate alone. Interactions between tree rooting depth, fire and precipitation affected the probability of observing a given biome state and the emergent traits of plant communities. Simulations where plant rooting depth varied in space provided the best match to satellite derived biomass estimates and generated biome distributions that reproduced contemporary biome maps well. Future projections showed that biomass distributions, biome distributions and plant trait spectra will change, however, the magnitude of these changes are highly dependent on the applied atmospheric forcings.

Large-scale impact of climate change vs. land-use change on future biome shifts in Latin America.

Science.gov (United States)

Boit, Alice; Sakschewski, Boris; Boysen, Lena; Cano-Crespo, Ana; Clement, Jan; Garcia-Alaniz, Nashieli; Kok, Kasper; Kolb, Melanie; Langerwisch, Fanny; Rammig, Anja; Sachse, René; van Eupen, Michiel; von Bloh, Werner; Clara Zemp, Delphine; Thonicke, Kirsten

2016-11-01

Climate change and land-use change are two major drivers of biome shifts causing habitat and biodiversity loss. What is missing is a continental-scale future projection of the estimated relative impacts of both drivers on biome shifts over the course of this century. Here, we provide such a projection for the biodiverse region of Latin America under four socio-economic development scenarios. We find that across all scenarios 5-6% of the total area will undergo biome shifts that can be attributed to climate change until 2099. The relative impact of climate change on biome shifts may overtake land-use change even under an optimistic climate scenario, if land-use expansion is halted by the mid-century. We suggest that constraining land-use change and preserving the remaining natural vegetation early during this century creates opportunities to mitigate climate-change impacts during the second half of this century. Our results may guide the evaluation of socio-economic scenarios in terms of their potential for biome conservation under global change. © 2016 John Wiley & Sons Ltd.

Terrestrial ecosystem process model Biome-BGCMuSo v4.0: summary of improvements and new modeling possibilities

Science.gov (United States)

Hidy, Dóra; Barcza, Zoltán; Marjanović, Hrvoje; Zorana Ostrogović Sever, Maša; Dobor, Laura; Gelybó, Györgyi; Fodor, Nándor; Pintér, Krisztina; Churkina, Galina; Running, Steven; Thornton, Peter; Bellocchi, Gianni; Haszpra, László; Horváth, Ferenc; Suyker, Andrew; Nagy, Zoltán

2016-12-01

The process-based biogeochemical model Biome-BGC was enhanced to improve its ability to simulate carbon, nitrogen, and water cycles of various terrestrial ecosystems under contrasting management activities. Biome-BGC version 4.1.1 was used as a base model. Improvements included addition of new modules such as the multilayer soil module, implementation of processes related to soil moisture and nitrogen balance, soil-moisture-related plant senescence, and phenological development. Vegetation management modules with annually varying options were also implemented to simulate management practices of grasslands (mowing, grazing), croplands (ploughing, fertilizer application, planting, harvesting), and forests (thinning). New carbon and nitrogen pools have been defined to simulate yield and soft stem development of herbaceous ecosystems. The model version containing all developments is referred to as Biome-BGCMuSo (Biome-BGC with multilayer soil module; in this paper, Biome-BGCMuSo v4.0 is documented). Case studies on a managed forest, cropland, and grassland are presented to demonstrate the effect of model developments on the simulation of plant growth as well as on carbon and water balance.

Karoo biome: a preliminary sythesis. Part 1 - physical environment

CSIR Research Space (South Africa)

Cowling, RM

1986-01-01

Full Text Available . It is a multi-authored publication covering a wide range of topics. This first volume summarizes what is currently known on the physical environment of the biome; namely geology, soils, climate, hydrology, geohydrology and soil erosion. Other aspects...

La filatelia biomédica

OpenAIRE

Emilio J.A. Roldán; Claudio Zuckerberg

2011-01-01

La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ay...

Tropical rainforests dominate multi-decadal variability of the global carbon cycle

Science.gov (United States)

Zhang, X.; Wang, Y. P.; Peng, S.; Rayner, P. J.; Silver, J.; Ciais, P.; Piao, S.; Zhu, Z.; Lu, X.; Zheng, X.

2017-12-01

Recent studies find that inter-annual variability of global atmosphere-to-land CO2 uptake (NBP) is dominated by semi-arid ecosystems. However, the NBP variations at decadal to multi-decadal timescales are still not known. By developing a basic theory for the role of net primary production (NPP) and heterotrophic respiration (Rh) on NBP and applying it to 100-year simulations of terrestrial ecosystem models forced by observational climate, we find that tropical rainforests dominate the multi-decadal variability of global NBP (48%) rather than the semi-arid lands (35%). The NBP variation at inter-annual timescales is almost 90% contributed by NPP, but across longer timescales is progressively controlled by Rh that constitutes the response from the NPP-derived soil carbon input (40%) and the response of soil carbon turnover rates to climate variability (60%). The NBP variations of tropical rainforests is modulated by the ENSO and the PDO through their significant influences on temperature and precipitation at timescales of 2.5-7 and 25-50 years, respectively. This study highlights the importance of tropical rainforests on the multi-decadal variability of global carbon cycle, suggesting that we need to carefully differentiate the effect of NBP long-term fluctuations associated with ocean-related climate modes on the long-term trend in land sink.

Biome-BGC: Terrestrial Ecosystem Process Model, Version 4.1.1

Data.gov (United States)

National Aeronautics and Space Administration — ABSTRACT: Biome-BGC is a computer program that estimates fluxes and storage of energy, water, carbon, and nitrogen for the vegetation and soil components of...

Biome-BGC: Terrestrial Ecosystem Process Model, Version 4.1.1

Data.gov (United States)

National Aeronautics and Space Administration — Biome-BGC is a computer program that estimates fluxes and storage of energy, water, carbon, and nitrogen for the vegetation and soil components of terrestrial...

Anthropogenic biomes: a key contribution to earth-system science

Science.gov (United States)

Lilian Alessa; F. Stuart Chapin

2008-01-01

Human activities now dominate most of the ice-free terrestrial surface. A recent article presents a classification and global map of human-influenced biomes of the world that provides a novel and potentially appropriate framework for projecting changes in earth-system dynamics.

Structural development and web service based sensitivity analysis of the Biome-BGC MuSo model

Science.gov (United States)

Hidy, Dóra; Balogh, János; Churkina, Galina; Haszpra, László; Horváth, Ferenc; Ittzés, Péter; Ittzés, Dóra; Ma, Shaoxiu; Nagy, Zoltán; Pintér, Krisztina; Barcza, Zoltán

2014-05-01

Studying the greenhouse gas exchange, mainly the carbon dioxide sink and source character of ecosystems is still a highly relevant research topic in biogeochemistry. During the past few years research focused on managed ecosystems, because human intervention has an important role in the formation of the land surface through agricultural management, land use change, and other practices. In spite of considerable developments current biogeochemical models still have uncertainties to adequately quantify greenhouse gas exchange processes of managed ecosystem. Therefore, it is an important task to develop and test process-based biogeochemical models. Biome-BGC is a widely used, popular biogeochemical model that simulates the storage and flux of water, carbon, and nitrogen between the ecosystem and the atmosphere, and within the components of the terrestrial ecosystems. Biome-BGC was originally developed by the Numerical Terradynamic Simulation Group (NTSG) of University of Montana (http://www.ntsg.umt.edu/project/biome-bgc), and several other researchers used and modified it in the past. Our research group developed Biome-BGC version 4.1.1 to improve essentially the ability of the model to simulate carbon and water cycle in real managed ecosystems. The modifications included structural improvements of the model (e.g., implementation of multilayer soil module and drought related plant senescence; improved model phenology). Beside these improvements management modules and annually varying options were introduced and implemented (simulate mowing, grazing, planting, harvest, ploughing, application of fertilizers, forest thinning). Dynamic (annually varying) whole plant mortality was also enabled in the model to support more realistic simulation of forest stand development and natural disturbances. In the most recent model version separate pools have been defined for fruit. The model version which contains every former and new development is referred as Biome-BGC MuSo (Biome

Parameterisation of Biome BGC to assess forest ecosystems in Africa

Science.gov (United States)

Gautam, Sishir; Pietsch, Stephan A.

2010-05-01

African forest ecosystems are an important environmental and economic resource. Several studies show that tropical forests are critical to society as economic, environmental and societal resources. Tropical forests are carbon dense and thus play a key role in climate change mitigation. Unfortunately, the response of tropical forests to environmental change is largely unknown owing to insufficient spatially extensive observations. Developing regions like Africa where records of forest management for long periods are unavailable the process-based ecosystem simulation model - BIOME BGC could be a suitable tool to explain forest ecosystem dynamics. This ecosystem simulation model uses descriptive input parameters to establish the physiology, biochemistry, structure, and allocation patterns within vegetation functional types, or biomes. Undocumented parameters for larger-resolution simulations are currently the major limitations to regional modelling in African forest ecosystems. This study was conducted to document input parameters for BIOME-BGC for major natural tropical forests in the Congo basin. Based on available literature and field measurements updated values for turnover and mortality, allometry, carbon to nitrogen ratios, allocation of plant material to labile, cellulose, and lignin pools, tree morphology and other relevant factors were assigned. Daily climate input data for the model applications were generated using the statistical weather generator MarkSim. The forest was inventoried at various sites and soil samples of corresponding stands across Gabon were collected. Carbon and nitrogen in the collected soil samples were determined from soil analysis. The observed tree volume, soil carbon and soil nitrogen were then compared with the simulated model outputs to evaluate the model performance. Furthermore, the simulation using Congo Basin specific parameters and generalised BIOME BGC parameters for tropical evergreen broadleaved tree species were also

Improved clonality detection in B-cell lymphoma using a semi-nested modification of the BIOMED-2 PCR assay for IGH rearrangement: A paraffin-embedded tissue study.

Science.gov (United States)

Sakamoto, Yuma; Masaki, Ayako; Aoyama, Satsuki; Han, Shusen; Saida, Kosuke; Fujii, Kana; Takino, Hisashi; Murase, Takayuki; Iida, Shinsuke; Inagaki, Hiroshi

2017-09-01

The BIOMED-2 PCR protocol for targeting the IGH gene is widely employed for detecting clonality in B-cell malignancies. Unfortunately, the detection of clonality with this method is not very sensitive when paraffin sections are used as a DNA source. To increase the sensitivity, we devised a semi-nested modification of a JH consensus primer. The clonality detection rates of three assays were compared: the standard BIOMED-2, BIOMED-2 assay followed by BIOMED-2 re-amplification, and BIOMED-2 assay followed by semi-nested BIOMED-2. We tested more than 100 cases using paraffin-embedded tissues of various B-cell lymphomas, and found that the clonality detection rates with the above three assays were 63.9%, 79.6%, and 88.0%, respectively. While BIOMED-2 re-amplification was significantly more sensitive than the standard BIOMED-2, the semi-nested BIOMED-2 was significantly more sensitive than both the standard BIOMED-2 and BIOMED-2 re-amplification. An increase in sensitivity was observed in all lymphoma subtypes examined. In conclusion, tumor clonality may be detected in nearly 90% of B-cell lymphoma cases with semi-nested BIOMED-2. This ancillary assay may be useful when the standard BIOMED-2 fails to detect clonality in histopathologically suspected B-cell lymphomas. © 2017 Japanese Society of Pathology and John Wiley & Sons Australia, Ltd.

Importance of soil-water to the Caatinga biome, Brazil

NARCIS (Netherlands)

Alves Rodrigues Pinheiro, Everton; Metselaar, Klaas; Jong van Lier, de Quirijn; Araújo, de José Carlos

2016-01-01

Northeastern Brazil is hydrologically characterized by recurrent droughts leading to a highly vulnerable natural water resource system. The region contains the Caatinga biome, covering an area of approximately 800000km². To increase insight in water balance components for this sparsely

Aura-biomes are present in the water layer above coral reef benthic macro-organisms.

Science.gov (United States)

Walsh, Kevin; Haggerty, J Matthew; Doane, Michael P; Hansen, John J; Morris, Megan M; Moreira, Ana Paula B; de Oliveira, Louisi; Leomil, Luciana; Garcia, Gizele D; Thompson, Fabiano; Dinsdale, Elizabeth A

2017-01-01

As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1) the coral Mussismilia braziliensis , (2) fleshy macroalgae ( Stypopodium , Dictota and Canistrocarpus ), (3) turf algae, and (4) the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific "aura-biome". The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria , Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

Reforming and synthesis of dimethoxymethane and dimethyl ether for H2 production

International Nuclear Information System (INIS)

Sun, Q.

2007-07-01

This work is related to the subject 'Clean Energy'. Dimethoxymethane (DMM) is a suitable H 2 storage material for mobile application due to its high H 2 content and non-toxicity. It was found that DMM can be 100% reformed to produce H 2 on a complex catalyst composed of an acid component such as Nb 2 O 5 or niobium phosphate (NbP) combined with CuZnO/Al 2 O 3 catalyst. Moreover, V 2 O 5 /NbP and V 2 O 5 -TiO 2 -SO 4 2- catalysts were prepared and evaluated in the reaction of selective oxidation of methanol to DMM. The surface acidic and redox properties of V 2 O 5 -TiO 2 -SO 4 2- were correlated to the reactive performance of the catalysts. The adsorption properties of Nb 2 O 5 and NbP used in methanol dehydration reaction were also studied. (author)

BOREAS RSS-8 BIOME-BGC SSA Simulation of Annual Water and Carbon Fluxes

Science.gov (United States)

Hall, Forrest G. (Editor); Nickeson, Jaime (Editor); Kimball, John

2000-01-01

The BOREAS RSS-8 team performed research to evaluate the effect of seasonal weather and landcover heterogeneity on boreal forest regional water and carbon fluxes using a process-level ecosystem model, BIOME-BGC, coupled with remote sensing-derived parameter maps of key state variables. This data set contains derived maps of landcover type and crown and stem biomass as model inputs to determine annual evapotranspiration, gross primary production, autotrophic respiration, and net primary productivity within the BOREAS SSA-MSA, at a 30-m spatial resolution. Model runs were conducted over a 3-year period from 1994-1996; images are provided for each of those years. The data are stored in binary image format. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

Remote Sensing of the Urban Heat Island Effect Across Biomes in the Continental USA

Science.gov (United States)

Imhoff, Marc L.; Zhang, Ping; Wolfe, Robert E.; Bounoua, Lahouari

2010-01-01

Impervious surface area (ISA) from the Landsat TM-based NLCD 2001 dataset and land surface temperature (LST) from MODIS averaged over three annual cycles (2003-2005) are used in a spatial analysis to assess the urban heat island (UHI) skin temperature amplitude and its relationship to development intensity, size, and ecological setting for 38 of the most populous cities in the continental United States. Development intensity zones based on %ISA are defined for each urban area emanating outward from the urban core to the nonurban rural areas nearby and used to stratify sampling for land surface temperatures and NDVI. Sampling is further constrained by biome and elevation to insure objective intercomparisons between zones and between cities in different biomes permitting the definition of hierarchically ordered zones that are consistent across urban areas in different ecological setting and across scales. We find that ecological context significantly influences the amplitude of summer daytime UHI (urban-rural temperature difference) the largest (8 C average) observed for cities built in biomes dominated by temperate broadleaf and mixed forest. For all cities combined, ISA is the primary driver for increase in temperature explaining 70% of the total variance in LST. On a yearly average, urban areas are substantially warmer than the non-urban fringe by 2.9 C, except for urban areas in biomes with arid and semiarid climates. The average amplitude of the UHI is remarkably asymmetric with a 4.3 C temperature difference in summer and only 1.3 C in winter. In desert environments, the LST's response to ISA presents an uncharacteristic "U-shaped" horizontal gradient decreasing from the urban core to the outskirts of the city and then increasing again in the suburban to the rural zones. UHI's calculated for these cities point to a possible heat sink effect. These observational results show that the urban heat island amplitude both increases with city size and is seasonally

NEE and GPP dynamic evolution at two biomes in the upper Spanish plateau

Science.gov (United States)

Sánchez, María Luisa; Pardo, Nuria; Pérez, Isidro Alberto; García, Maria de los Angeles

2014-05-01

In order to assess the ability of dominant biomes to act as a CO2 sink, two eddy correlation stations close to each other in central Spain have been concurrently operational since March 2008 until the present. The land use of the first station, AC, is a rapeseed rotating crop consisting of annual rotation of non-irrigated rapeseed, barley, peas, rye, and sunflower, respectively. The land use of the second, CIBA, is a mixture of open shrubs/crops, with open shrubs being markedly dominant. The period of measurements covered variable general meteorological conditions. 2009 and 2012 were dominated by drought, whereas 2010 was the rainiest year. Annual rainfall during 2008 and 2009 was close to the historical averaged annual means. This paper presents the dynamic evolution of NEE-8d and GPP-8d observed at the AC station over five years and compares the results with those concurrently observed at the CIBA station. GGP 8-d estimates at both stations were determined using a Light Use Efficiency Model, LUE. Input data for the LUE model were the FPAR 8-d products supplied by MODIS, PAR in situ measurements, and a scalar f, varying between 0 and 1, to take account of the reduction in maximum PAR conversion efficiency, ɛ0, under limiting environmental conditions. f values were assumed to be dependent on air temperature and evaporative fraction, EF, which was considered a proxy of soil moisture. ɛ0, a key parameter, which depends on land use types, was derived through the results of a linear regression fit between the GPP 8-d eddy covariance composites observed and the LUE concurrent 8-d model estimates. Over the five-year study period, both biomes behaved as CO2 sinks. However, the ratio of the NEE-8d total accumulated at AC and CIBA, respectively, was close to a factor two, revealing the effectiveness of the studied crops as CO2 sinks. On an annual basis, accumulated NEE-8d exhibited major variability in both biomes. At CIBA, the results were largely dominated by the

Forest resilience to drought varies across biomes.

Science.gov (United States)

Gazol, Antonio; Camarero, Jesus Julio; Vicente-Serrano, Sergio M; Sánchez-Salguero, Raúl; Gutiérrez, Emilia; de Luis, Martin; Sangüesa-Barreda, Gabriel; Novak, Klemen; Rozas, Vicente; Tíscar, Pedro A; Linares, Juan C; Martín-Hernández, Natalia; Martínez Del Castillo, Edurne; Ribas, Montse; García-González, Ignacio; Silla, Fernando; Camisón, Alvaro; Génova, Mar; Olano, José M; Longares, Luis A; Hevia, Andrea; Tomás-Burguera, Miquel; Galván, J Diego

2018-05-01

Forecasted increase drought frequency and severity may drive worldwide declines in forest productivity. Species-level responses to a drier world are likely to be influenced by their functional traits. Here, we analyse forest resilience to drought using an extensive network of tree-ring width data and satellite imagery. We compiled proxies of forest growth and productivity (TRWi, absolutely dated ring-width indices; NDVI, Normalized Difference Vegetation Index) for 11 tree species and 502 forests in Spain corresponding to Mediterranean, temperate, and continental biomes. Four different components of forest resilience to drought were calculated based on TRWi and NDVI data before, during, and after four major droughts (1986, 1994-1995, 1999, and 2005), and pointed out that TRWi data were more sensitive metrics of forest resilience to drought than NDVI data. Resilience was related to both drought severity and forest composition. Evergreen gymnosperms dominating semi-arid Mediterranean forests showed the lowest resistance to drought, but higher recovery than deciduous angiosperms dominating humid temperate forests. Moreover, semi-arid gymnosperm forests presented a negative temporal trend in the resistance to drought, but this pattern was absent in continental and temperate forests. Although gymnosperms in dry Mediterranean forests showed a faster recovery after drought, their recovery potential could be constrained if droughts become more frequent. Conversely, angiosperms and gymnosperms inhabiting temperate and continental sites might have problems to recover after more intense droughts since they resist drought but are less able to recover afterwards. © 2018 John Wiley & Sons Ltd.

Extraction of minority carrier diffusion length of MWIR Type-II superlattice nBp detector

Science.gov (United States)

Taghipour, Zahra; Kazemi, Alireza; Myers, Stephen; Wijewarnasuriya, Priyalal; Mathews, Sen; Steenbergen, Elizabeth H.; Morath, Christian; Cowan, Vincent M.; Ariyawansa, Gamini; Scheihing, John; Krishna, Sanjay

2017-08-01

We present a model for the spectral external quantum efficiency (EQE) to extract the minority carrier diffusion length (Ln) of a unipolar nBp InAs/GaSb Type-II superlattice (T2SL) mid-wave infrared (MWIR) detector. The detector consists of a 4 μm thick p-doped 10ML InAs/10ML GaSb SL absorber with a 50% cut-off wavelength of 5 μm at 80 K and zero bias. The n-type doped InAs/AlSb SL barrier in the structure was included to reduce the GR dark current. By fitting the experimentally measured EQE data to the theoretically calculated QE based on the solution of the drift-diffusion equation, the p-type absorber was found the have Ln = 10 +/- 0.5 μm at 80K, and Ln = 12 +/- 0.5 μm at 120K and 150K. We performed the absorption coefficient measurement at different temperatures of interest. Also, we estimated the reduced background concentration and the built-in potential by utilizing a capacitance-voltage measurement technique. We used time-resolved-photoluminescence (TRPL) to determine the lifetime at 80K. With the result of the model and the lifetime measurement, we calculated the diffusion coefficient and the mobility in the T2SL detector at various temperatures. Also, we studied the behavior of different dark current mechanisms by fitting the experimentally measured and simulated dark current density under different operating temperatures and biases.

Reforming and synthesis of dimethoxymethane and dimethyl ether for H{sub 2} production; Reformage et synthese des dimethoxymethane et dimethylether pour la production d'hydrogene

Energy Technology Data Exchange (ETDEWEB)

Sun, Q

2007-07-15

This work is related to the subject 'Clean Energy'. Dimethoxymethane (DMM) is a suitable H{sub 2} storage material for mobile application due to its high H{sub 2} content and non-toxicity. It was found that DMM can be 100% reformed to produce H{sub 2} on a complex catalyst composed of an acid component such as Nb{sub 2}O{sub 5} or niobium phosphate (NbP) combined with CuZnO/Al{sub 2}O{sub 3} catalyst. Moreover, V{sub 2}O{sub 5}/NbP and V{sub 2}O{sub 5}-TiO{sub 2}-SO{sub 4}{sup 2-} catalysts were prepared and evaluated in the reaction of selective oxidation of methanol to DMM. The surface acidic and redox properties of V{sub 2}O{sub 5}-TiO{sub 2}-SO{sub 4}{sup 2-} were correlated to the reactive performance of the catalysts. The adsorption properties of Nb{sub 2}O{sub 5} and NbP used in methanol dehydration reaction were also studied. (author)

Large-scale impact of climate change vs. land-use change on future biome shifts in Latin America

NARCIS (Netherlands)

Boit, Alice; Sakschewski, Boris; Boysen, Lena; Cano-Crespo, Ana; Clement, Jan; Garcia-alaniz, Nashieli; Kok, Kasper; Kolb, Melanie; Langerwisch, Fanny; Rammig, Anja; Sachse, René; Eupen, van Michiel; Bloh, von Werner; Clara Zemp, Delphine; Thonicke, Kirsten

2016-01-01

Climate change and land-use change are two major drivers of biome shifts causing habitat and biodiversity loss. What is missing is a continental-scale future projection of the estimated relative impacts of both drivers on biome shifts over the course of this century. Here, we provide such a

Estimating 40 years of nitrogen deposition in global biomes using the SCIAMACHY NO2 column

Science.gov (United States)

Lu, Xuehe; Zhang, Xiuying; Liu, Jinxun; Jin, Jiaxin

2016-01-01

Owing to human activity, global nitrogen (N) cycles have been altered. In the past 100 years, global N deposition has increased. Currently, the monitoring and estimating of N deposition and the evaluation of its effects on global carbon budgets are the focus of many researchers. NO2 columns retrieved by space-borne sensors provide us with a new way of exploring global N cycles and these have the ability to estimate N deposition. However, the time range limitation of NO2 columns makes the estimation of long timescale N deposition difficult. In this study we used ground-based NOx emission data to expand the density of NO2columns, and 40 years of N deposition (1970–2009) was inverted using the multivariate linear model with expanded NO2 columns. The dynamic of N deposition was examined in both global and biome scales. The results show that the average N deposition was 0.34 g N m–2 year–1 in the 2000s, which was an increase of 38.4% compared with the 1970s’. The total N deposition in different biomes is unbalanced. N deposition is only 38.0% of the global total in forest biomes; this is made up of 25.9%, 11.3, and 0.7% in tropical, temperate, and boreal forests, respectively. As N-limited biomes, there was little increase of N deposition in boreal forests. However, N deposition has increased by a total of 59.6% in tropical forests and croplands, which are N-rich biomes. Such characteristics may influence the effects on global carbon budgets.

Ecological consequences of the expansion of N2-fixing plants in cold biomes

Science.gov (United States)

Hiltbrunner, Erika; Aerts, Rien; Bühlmann, Tobias; Huss-Danell, Kerstin; Magnusson, Borgthor; Myrold, David D.; Reed, Sasha C.; Sigurdsson, Bjarni D.; Körner, Christian

2014-01-01

Research in warm-climate biomes has shown that invasion by symbiotic dinitrogen (N2)-fixing plants can transform ecosystems in ways analogous to the transformations observed as a consequence of anthropogenic, atmospheric nitrogen (N) deposition: declines in biodiversity, soil acidification, and alterations to carbon and nutrient cycling, including increased N losses through nitrate leaching and emissions of the powerful greenhouse gas nitrous oxide (N2O). Here, we used literature review and case study approaches to assess the evidence for similar transformations in cold-climate ecosystems of the boreal, subarctic and upper montane-temperate life zones. Our assessment focuses on the plant genera Lupinus and Alnus, which have become invasive largely as a consequence of deliberate introductions and/or reduced land management. These cold biomes are commonly located in remote areas with low anthropogenic N inputs, and the environmental impacts of N2-fixer invasion appear to be as severe as those from anthropogenic N deposition in highly N polluted areas. Hence, inputs of N from N2 fixation can affect ecosystems as dramatically or even more strongly than N inputs from atmospheric deposition, and biomes in cold climates represent no exception with regard to the risk of being invaded by N2-fixing species. In particular, the cold biomes studied here show both a strong potential to be transformed by N2-fixing plants and a rapid subsequent saturation in the ecosystem’s capacity to retain N. Therefore, analogous to increases in N deposition, N2-fixing plant invasions must be deemed significant threats to biodiversity and to environmental quality.

Investigación biomédica, intereses económicos y divulgación periodística

Directory of Open Access Journals (Sweden)

Roberto Germán Zurriaráin

2017-01-01

Full Text Available Este artículo pretende afirmar que toda investigación, especialmente la biomédica, para que sea precisamente tal, tiene que poseer una dimensión ética. Y goza de esta dimensión siempre y cuando vaya en beneficio del propio ser humano. Sin ella no se puede hablar de progreso en la investigación biomédica. Luego, solamente se puede denominar “progreso” si hablamos de una investigación que vaya en beneficio de cada uno de los seres humanos. Así es, la investigación biomédica se tiene que traducir en un avanzar del ser humano en humanidad. Pero desgracia- damente muchas veces no ocurre esto. Se llama investigación biomédica a todo, independien- temente de que posea o no una dimensión ética, considerada esta como una instancia exterior. Esta dimensión, insertada en la propia investigación biomédica, es sustituida por otros intere- ses, sobre todo de carácter económico, especialmente en reproducción humana artificial. Así también, los medios de comunicación social hacen eco de este tipo de estudios en biomedicina. Pero muchas veces los medios buscan más las emociones del espectador que su responsabilidad por transmitir noticias con rigor y veracidad.

Sensitivity Analysis of Biome-Bgc Model for Dry Tropical Forests of Vindhyan Highlands, India

Science.gov (United States)

Kumar, M.; Raghubanshi, A. S.

2011-08-01

A process-based model BIOME-BGC was run for sensitivity analysis to see the effect of ecophysiological parameters on net primary production (NPP) of dry tropical forest of India. The sensitivity test reveals that the forest NPP was highly sensitive to the following ecophysiological parameters: Canopy light extinction coefficient (k), Canopy average specific leaf area (SLA), New stem C : New leaf C (SC:LC), Maximum stomatal conductance (gs,max), C:N of fine roots (C:Nfr), All-sided to projected leaf area ratio and Canopy water interception coefficient (Wint). Therefore, these parameters need more precision and attention during estimation and observation in the field studies.

Selection, isolation, and identification of fungi for bioherbicide production

Directory of Open Access Journals (Sweden)

Angélica Rossana Castro de Souza

Full Text Available Abstract Production of a bioherbicide for biological control of weeds requires a series of steps, from selection of a suitable microbial strain to final formulation. Thus, this study aimed to select fungi for production of secondary metabolites with herbicidal activity using biological resources of the Brazilian Pampa biome. Phytopathogenic fungi were isolated from infected tissues of weeds in the Pampa biome. A liquid synthetic culture medium was used for production of metabolites. The phytotoxicity of fungal metabolites was assessed via biological tests using the plant Cucumis sativus L., and the most promising strain was identified by molecular analysis. Thirty-nine fungi were isolated, and 28 presented some phytotoxic symptoms against the target plant. Fungus VP51 belonging to the genus Diaporthe showed the most pronounced herbicidal activity. The Brazilian Pampa biome is a potential resource for the development of new and sustainable chemical compounds for modern agriculture.

Pollen-based biome reconstructions for Colombia at 3000, 6000, 15 000 and 18 000 14C yr ago : Late Quaternary tropical vegetation dynamics

NARCIS (Netherlands)

Marchant, R.; Behling, H.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Schreve-Brinkman, E.; Geel, van B.; Hammen, van der T.; Reenen, van G.

2002-01-01

Colombian biomes are reconstructed at 45 sites from the modern period extending to the Last Glacial Maximum (LGM). The basis for our reconstruction is pollen data assigned to plant functional types and biomes at six 3000-yr intervals. A reconstruction of modern biomes is used to check the treatment

South African Red Data Book: Plants - fynbos and Karoo biomes

CSIR Research Space (South Africa)

Hall, AV

1985-01-01

Full Text Available In this report a list is given of 1 808 rare, threatened and recently extinct plants in the fynbos and karoo biomes in the Cape Province of South Africa. The area covers the south-western and southern Cape, Namaqualand and the Karoo. Following...

Climate control of terrestrial carbon exchange across biomes and continents

Czech Academy of Sciences Publication Activity Database

Yi, C.; Ricciuto, D.; Marek, Michal V.

2010-01-01

Roč. 5, č. 3 (2010), s. 034007 ISSN 1748-9326 Institutional research plan: CEZ:AV0Z60870520 Keywords : NEE * climate control * terrestrial carbon sequestration * temperature * dryness * eddy flux * biomes * photosynthesis * respiration * global carbon cycle Subject RIV: EH - Ecology, Behaviour Impact factor: 3.049, year: 2010

Ticks parasitizing bats (Mammalia: Chiroptera) in the Caatinga Biome, Brazil.

Science.gov (United States)

Luz, Hermes Ribeiro; Muñoz-Leal, Sebastián; Almeida, Juliana Cardoso de; Faccini, João Luiz Horacio; Labruna, Marcelo Bahia

2016-01-01

In this paper, the authors report ticks parasitizing bats from the Serra das Almas Natural Reserve (RPPN) located in the municipality of Crateús, state of Ceará, in the semiarid Caatinga biome of northeastern Brazil. The study was carried out during nine nights in the dry season (July 2012) and 10 nights in the rainy season (February 2013). Only bats of the Phyllostomidae and Mormoopidae families were parasitized by ticks. The species Artibeus planirostris and Carolia perspicillata were the most parasitized. A total of 409 larvae were collected and classified into three genera: Antricola (n = 1), Nothoaspis (n = 1) and Ornithodoros (n = 407). Four species were morphologically identified as Nothoaspis amazoniensis, Ornithodoros cavernicolous, Ornithodoros fonsecai, Ornithodoros hasei, and Ornithodoros marinkellei. Ornithodoros hasei was the most common tick associated with bats in the current study. The present study expand the distributional ranges of at least three soft ticks into the Caatinga biome, and highlight an unexpected richness of argasid ticks inhabiting this arid ecosystem.

Impacts of land-use and land-cover change on stream hydrochemistry in the Cerrado and Amazon biomes.

Science.gov (United States)

Nóbrega, Rodolfo L B; Guzha, Alphonce C; Lamparter, Gabriele; Amorim, Ricardo S S; Couto, Eduardo G; Hughes, Harold J; Jungkunst, Hermann F; Gerold, Gerhard

2018-04-14

Studies on the impacts of land-use and land-cover change on stream hydrochemistry in active deforestation zones of the Amazon agricultural frontier are limited and have often used low-temporal-resolution datasets. Moreover, these impacts are not concurrently assessed in well-established agricultural areas and new deforestations hotspots. We aimed to identify these impacts using an experimental setup to collect high-temporal-resolution hydrological and hydrochemical data in two pairs of low-order streams in catchments under contrasting land use and land cover (native vegetation vs. pasture) in the Amazon and Cerrado biomes. Our results indicate that the conversion of natural landscapes to pastures increases carbon and nutrient fluxes via streamflow in both biomes. These changes were the greatest in total inorganic carbon in the Amazon and in potassium in the Cerrado, representing a 5.0- and 5.5-fold increase in the fluxes of each biome, respectively. We found that stormflow, which is often neglected in studies on stream hydrochemistry in the tropics, plays a substantial role in the carbon and nutrient fluxes, especially in the Amazon biome, as its contributions to hydrochemical fluxes are mostly greater than the volumetric contribution to the total streamflow. These findings demonstrate that assessments of the impacts of deforestation in the Amazon and Cerrado biomes should also take into account rapid hydrological pathways; however, this can only be achieved through collection of high-temporal-resolution data. Copyright © 2018 Elsevier B.V. All rights reserved.

Climate control of terrestrial carbon exchange across biomes and continents

Science.gov (United States)

Chuixiang Yi; Daniel Ricciuto; Runze Li; John Wolbeck; Xiyan Xu; Mats Nilsson; John Frank; William J. Massman

2010-01-01

Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO2 exchange with the atmosphere across biomes...

Multiple nutrient stresses at intersecting Pacific Ocean biomes detected by protein biomarkers.

Science.gov (United States)

Saito, Mak A; McIlvin, Matthew R; Moran, Dawn M; Goepfert, Tyler J; DiTullio, Giacomo R; Post, Anton F; Lamborg, Carl H

2014-09-05

Marine primary productivity is strongly influenced by the scarcity of required nutrients, yet our understanding of these nutrient limitations is informed by experimental observations with sparse geographical coverage and methodological limitations. We developed a quantitative proteomic method to directly assess nutrient stress in high-light ecotypes of the abundant cyanobacterium Prochlorococcus across a meridional transect in the central Pacific Ocean. Multiple peptide biomarkers detected widespread and overlapping regions of nutritional stress for nitrogen and phosphorus in the North Pacific Subtropical Gyre and iron in the equatorial Pacific. Quantitative protein analyses demonstrated simultaneous stress for these nutrients at biome interfaces. This application of proteomic biomarkers to diagnose ocean metabolism demonstrated Prochlorococcus actively and simultaneously deploying multiple biochemical strategies for low-nutrient conditions in the oceans. Copyright © 2014, American Association for the Advancement of Science.

Modelling the carbon budget of intensive forest monitoring sites in Germany using the simulation model BIOME-BGC

OpenAIRE

Jochheim, H.; Puhlmann, M.; Beese, F.; Berthold, D.; Einert, P.; Kallweit, R.; Konopatzky, A.; Meesenburg, H.; Meiwes, K.-J.; Raspe, S.; Schulte-Bisping, H.; Schulz, C.

2008-01-01

It is shown that by calibrating the simulation model BIOME-BGC with mandatory and optional Level II data, within the ICP Forest programme, a well-founded calculation of the carbon budget of forest stands is achievable and, based on succeeded calibration, the modified BIOME-BGC model is a useful tool to assess the effect of climate change on forest ecosystems. peerReviewed

Negative magnetoresistance in Weyl semimetals NbAs and NbP: Intrinsic chiral anomaly and extrinsic effects

Science.gov (United States)

Li, Yupeng; Wang, Zhen; Li, Pengshan; Yang, Xiaojun; Shen, Zhixuan; Sheng, Feng; Li, Xiaodong; Lu, Yunhao; Zheng, Yi; Xu, Zhu-An

2017-06-01

Chiral anomaly-induced negative magnetoresistance (NMR) has been widely used as critical transport evidence for the existence of Weyl fermions in topological semimetals. In this mini-review, we discuss the general observation of NMR phenomena in non-centrosymmetric NbP and NbAs. We show that NMR can arise from the intrinsic chiral anomaly of Weyl fermions and/or extrinsic effects, such as the superimposition of Hall signals; field-dependent inhomogeneous current flow in the bulk, i.e., current jetting; and weak localization (WL) of coexistent trivial carriers. The WL-controlled NMR is heavily dependent on sample quality and is characterized by a pronounced crossover from positive to negative MR growth at elevated temperatures, resulting from the competition between the phase coherence time and the spin-orbital scattering constant of the bulk trivial pockets. Thus, the correlation between the NMR and the chiral anomaly need to be scrutinized without the support of complimentary techniques. Because of the lifting of spin degeneracy, the spin orientations of Weyl fermions are either parallel or antiparallel to the momentum, which is a unique physical property known as helicity. The conservation of helicity provides strong protection for the transport of Weyl fermions, which can only be effectively scattered by magnetic impurities. Chemical doping with magnetic and non-magnetic impurities is thus more convincing than the NMR method for detecting the existence of Weyl fermions.

Plant litter dynamics in the forest-stream interface: precipitation is a major control across tropical biomes.

Science.gov (United States)

Tonin, Alan M; Gonçalves, José F; Bambi, Paulino; Couceiro, Sheyla R M; Feitoza, Lorrane A M; Fontana, Lucas E; Hamada, Neusa; Hepp, Luiz U; Lezan-Kowalczuk, Vânia G; Leite, Gustavo F M; Lemes-Silva, Aurea L; Lisboa, Leonardo K; Loureiro, Rafael C; Martins, Renato T; Medeiros, Adriana O; Morais, Paula B; Moretto, Yara; Oliveria, Patrícia C A; Pereira, Evelyn B; Ferreira, Lidiane P; Pérez, Javier; Petrucio, Mauricio M; Reis, Deusiano F; S Rezende, Renan; Roque, Nadia; Santos, Luiz E P; Siegloch, Ana E; Tonello, Gabriela; Boyero, Luz

2017-09-07

Riparian plant litter is a major energy source for forested streams across the world and its decomposition has repercussions on nutrient cycling, food webs and ecosystem functioning. However, we know little about plant litter dynamics in tropical streams, even though the tropics occupy 40% of the Earth's land surface. Here we investigated spatial and temporal (along a year cycle) patterns of litter inputs and storage in multiple streams of three tropical biomes in Brazil (Atlantic forest, Amazon forest and Cerrado savanna), predicting major differences among biomes in relation to temperature and precipitation regimes. Precipitation explained most of litter inputs and storage, which were generally higher in more humid biomes (litterfall: 384, 422 and 308 g m -2 y -1 , storage: 55, 113 and 38 g m -2 , on average in Atlantic forest, Amazon and Cerrado, respectively). Temporal dynamics varied across biomes in relation to precipitation and temperature, with uniform litter inputs but seasonal storage in Atlantic forest streams, seasonal inputs in Amazon and Cerrado streams, and aseasonal storage in Amazon streams. Our findings suggest that litter dynamics vary greatly within the tropics, but point to the major role of precipitation, which contrasts with the main influence of temperature in temperate areas.

Aspectos biométricos do desenvolvimento testicular e corporal em cutias (Dasyprocta aguti criadas em cativeiros

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Antônio Chaves de Assis-Neto

2003-01-01

Full Text Available Analisou-se os dados biométricos do desenvolvimento testicular e peso corporal de 31 cutias (Dasyprocta aguti desde o nascimento até os 14 meses de idade. As correlações entre o peso corporal, idade e parâmetros testiculares apresentaram-se altamente significativas. O peso testicular, o volume testicular, assim como os demais parâmetros biométricos testiculares (comprimento, diâmetro e perímetro, evoluíram lenta e gradualmente até os 8 meses de idade. A partir dos 9 meses, o crescimento foi mais rápido. O desenvolvimento biométrico do testículo pode ser dividido em duas fases, de 0 - 8 meses e de 9 - 14 meses de idade, sendo 9 meses considerado ponto de corte em se tratando de desenvolvimento testicular de cutias criadas em cativeiro.

Evaluating fire danger in Brazilian biomes: present and future patterns

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Silva, Patrícia; Bastos, Ana; DaCamara, Carlos; Libonati, Renata

2017-04-01

Climate change is expected to have a significant impact on fire occurrence and activity, particularly in Brazil, a region known to be fire-prone [1]. The Brazilian savanna, commonly referred to as cerrado, is a fire-adapted biome covering more than 20% of the country's total area. It presents the highest numbers of fire events, making it particularly susceptible to changes in climate. It is thus essential to understand the present fire regimes in Brazilian biomes, in order to better evaluate future patterns. The CPTEC/INPE, the Brazilian Center for Weather Forecasting and Climate Research at the Brazilian National Institute of Space Research developed a fire danger index based on the occurrence of hundreds of thousands of fire events in the main Brazilian biomes [2]: the Meteorological Fire Danger Index (MFDI). This index indicates the predisposition of vegetation to be burned on a given day, for given climate conditions preceding that day. It relies on daily values of air temperature, relative humidity, accumulated precipitation and vegetation cover. In this study we aim to access the capability of the MFDI to accurately replicate present fire conditions for different biomes, with a special focus on cerrado. To this end, we assess the link between the MFDI as calculated by three different reanalysis (ERA-Interim, NCEP/DOE Reanalysis 2 and MERRA-2) and the observed burned area. We further calculate the validated MFDI using a regional climate model, the RCA4 as forced by EC-Earth from CORDEX, to understand the ability of the model to characterize present fire danger. Finally, the need to calibrate the model to better characterize future fire danger was also evaluated. This work was developed within the framework of the Brazilian Fire-Land-Atmosphere System (BrFLAS) Project financed by the Portuguese and Brazilian science foundations, FCT and FAPESP (project references FAPESP/1389/2014 and 2014/20042-2). [1] KRAWCHUK, M.A.; MORITZ, M.A.; PARISIEN, M.A.; VAN DORN, J

A Study on the Quality and Identity of Brazilian Pampa Biome Honey: Evidences for Its Beneficial Effects against Oxidative Stress and Hyperglycemia.

Science.gov (United States)

Cruz, L C; Batista, J E S; Zemolin, A P P; Nunes, M E M; Lippert, D B; Royes, L F F; Soares, F A; Pereira, A B; Posser, T; Franco, J L

2014-01-01

We characterized, for the first time, the quality and identity of Brazilian Pampa biome honey and its antioxidant properties in vitro (FRAP, DDPH and ABTS). The potential protective effect of honey against oxidative stress induced by iron (Fe) and paraquat, (PQ) in a Drosophila melanogaster model (in vivo) was also tested. The results indicated that all honey samples tested showed antioxidant activity in vitro. Flies treated with honey showed increased lifespan and were protected against oxidative stress induced by Fe and PQ. Despite the high concentration of sugars in honey (approximately 70-80%), our results demonstrate a hypoglycemic-like effect of honey in Drosophila. Thus, this study demonstrates the high quality of Brazilian Pampa biome honey as well as its significant antioxidant activity in vitro and in vivo, pointing to the potential use of this natural product as an alternative in the therapy of oxidative stress-associated diseases.

A remarkable finding that suggests the existence of a new groundwater biome based on chemoautotrophic resources, named

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Ştefan Negrea

2009-01-01

Full Text Available An important work of subterranean biology, signed by Francis Dov Por, Ophel: a groundwater biome based on chemoautotrophic resources. The global significance of the Ayyalon cave finds, Israel is presented and discussed in the present paper. The subject is a remarkable discovery suggesting the existence of a new aquatic subterranean biome autonomous energy based the author calls Ophel, the Hebrew word for “darkness” and “netherworld”. For F.D. Por, this biome links different marine chemosynthetic ecosystems in a global biospheric entity. Finally, F.D. POR hypothesizes on the existence of three overlapped biospheres: the bacteriosphere in the depths of the planet’s crust, which does not require light or oxygen; the aphotic, subterranean deuterobiosphere, formed of bacterial chemosynthesis based eukaryotes and limited-supplied dissolved oxygen from above-ground; the above-ground eubiosphere, based on aerobic photosynthesis. I would like to emphasize that, at my suggestion, Prof. Dr. F.D. Por participated at the 18th International Symposium of Biospeleology from Cluj-Napoca (Romania at 10th to 15th July 2006 where he mentioned for the first time orally some data on the Ayyalon Cave and the Ophel biome.

Modelling the impacts of reoccurring fires in tropical savannahs using Biome-BGC.

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Fletcher, Charlotte; Petritsch, Richard; Pietsch, Stephan

2010-05-01

Fires are a dominant feature of tropical savannahs and have occurred throughout history by natural as well as human-induced means. These fires have a profound influence on the landscape in terms of flux dynamics and vegetative species composition. This study attempts to understand the impacts of fire regimes on flux dynamics and vegetation composition in savannahs using the Biome-BGC model. The Batéké Plateau, Gabon - an area of savannah grasslands in the Congo basin, serves as a case-study. To achieve model validation for savannahs, data sets from stands with differing levels of past burning are used. It is hypothesised that the field measurements from those stands with lower-levels of past burning will correlate with the Biome-BGC model output, meaning that the model is validated for the savannah excluding fire regimes. However, in reality, fire is frequent in the savannah. Data on past fire events are available from the Moderate Resolution Imaging Spectroradiometer (MODIS) to provide the fire regimes of the model. As the field data-driven measurements of the burnt stands are influenced by fire in the savannah, this will therefore result in a Biome-BGC model validated for the impacts of fire on savannah ecology. The validated model can then be used to predict the savannah's flux dynamics under the fire scenarios expected with climate and/or human impact change.

Toward Understanding Dynamics in Shifting Biomes: An Individual Based Modeling Approach to Characterizing Drought and Mortality in Central Western Canada

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Armstrong, A. H.; Foster, A.; Rogers, B. M.; Hogg, T.; Michaelian, M.; Shuman, J. K.; Shugart, H. H., Jr.; Goetz, S. J.

2017-12-01

The Arctic-Boreal zone is known be warming at an accelerated rate relative to other biomes. Persistent warming has already affected the high northern latitudes, altering vegetation productivity, carbon sequestration, and many other ecosystem processes and services. The central-western Canadian boreal forests and aspen parkland are experiencing a decade long drought, and rainfall has been identified as a key factor controlling the location of the boundary between forest and prairie in this region. Shifting biome with related greening and browning trends are readily measureable with remote sensing, but the dynamics that create and result from them are not well understood. In this study, we use the University of Virginia Forest Model Enhanced (UVAFME), an individual-based forest model, to simulate the changes that are occurring across the southern boreal and parkland forests of west-central Canada. We present a parameterization of UVAFME for western central Canadian forests, validated with CIPHA data (Climate Change Impacts on the Productivity and Health of Aspen), and improved mortality. In order to gain a fine-scale understanding of how climate change and specifically drought will continue to affect the forests of this region, we simulated forest conditions following CMIP5 climate scenarios. UVAFME predictions were compared with statistical models and satellite observations of productivity across the landscape. Changes in forest cover, forest type, aboveground biomass, and mortality and recruitment dynamics are presented, highlighting the high vulnerability of this region to vegetation transitions associated with future droughts.

Biome depletion in conjunction with evolutionary mismatches could play a role in the etiology of neurofibromatosis 1.

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Beales, Donna L

2015-04-01

Neurofibromatosis 1 (NF1) arises de novo in a striking 30-50% of cases, pointing toward an environmental etiology, though none has been clearly identified. The Biome Depletion Theory posits that the absence of mutualistic and commensal organisms within the human body coupled with modern lifestyle alterations may have profoundly deleterious effects, inclusive of immunologic derangement that is thought to result in allergy, atopy, and numerous autoimmune diseases. Biome depletion has been implicated as a factor in the etiology of both multiple sclerosis and autism spectrum disorders; biome reconstitution, i.e. replenishment of the biome with certain keynote species, is being used in the treatment of these and other autoimmune states. Neurofibromatosis 1 has been associated with allergy, various autoimmune states, multiple sclerosis, and autism. Recent research has posited that NF1, multiple sclerosis and autism may all arise from disturbances in the neural crest during gestation. This paper hypothesizes that there is indirect evidence that a highly inflammatory uterine state may precipitate epigenetic changes in vulnerable NF-related genes in the course of fetal development. The etiology of NF1 may lie in the absence of immunomodulation by commensal and mutualistic species once ubiquitously present in the environment, as well as through adoption of a modern lifestyle that contributes to chronic inflammation. Replenishment of helminths and other missing organisms to the human biome prior to conception as well as addressing nutritional status, psychological stress, and environmental exposures may prevent the development of NF1. Copyright © 2015 Elsevier Ltd. All rights reserved.

Carbon storage in permafrost and soils of the mammoth tundra-steppe biome: role in the global carbon budget

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N.S. Zimov; S.A. Zimov; A.E. Zimova; G.M. Zimova; V.I. Chuprynin; F.S. Chapin

2009-01-01

During the Last Glacial Maximum (LGM), atmospheric CO2 concentration was 80-100 ppmv lower than in preindustrial times. At that time steppe-tundra was the most extensive biome on Earth. Some authors assume that C storage in that biome was very small, similar to today's deserts, and that the terrestrial carbon (C) reservoir increased at the...

Reactivity continuum modeling of leaf, root, and wood decomposition across biomes

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Koehler, Birgit; Tranvik, Lars J.

2015-07-01

Large carbon dioxide amounts are released to the atmosphere during organic matter decomposition. Yet the large-scale and long-term regulation of this critical process in global carbon cycling by litter chemistry and climate remains poorly understood. We used reactivity continuum (RC) modeling to analyze the decadal data set of the "Long-term Intersite Decomposition Experiment," in which fine litter and wood decomposition was studied in eight biome types (224 time series). In 32 and 46% of all sites the litter content of the acid-unhydrolyzable residue (AUR, formerly referred to as lignin) and the AUR/nitrogen ratio, respectively, retarded initial decomposition rates. This initial rate-retarding effect generally disappeared within the first year of decomposition, and rate-stimulating effects of nutrients and a rate-retarding effect of the carbon/nitrogen ratio became more prevalent. For needles and leaves/grasses, the influence of climate on decomposition decreased over time. For fine roots, the climatic influence was initially smaller but increased toward later-stage decomposition. The climate decomposition index was the strongest climatic predictor of decomposition. The similar variability in initial decomposition rates across litter categories as across biome types suggested that future changes in decomposition may be dominated by warming-induced changes in plant community composition. In general, the RC model parameters successfully predicted independent decomposition data for the different litter-biome combinations (196 time series). We argue that parameterization of large-scale decomposition models with RC model parameters, as opposed to the currently common discrete multiexponential models, could significantly improve their mechanistic foundation and predictive accuracy across climate zones and litter categories.

Ticks parasitizing bats (Mammalia: Chiroptera in the Caatinga Biome, Brazil

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Hermes Ribeiro Luz

Full Text Available Abstract In this paper, the authors report ticks parasitizing bats from the Serra das Almas Natural Reserve (RPPN located in the municipality of Crateús, state of Ceará, in the semiarid Caatinga biome of northeastern Brazil. The study was carried out during nine nights in the dry season (July 2012 and 10 nights in the rainy season (February 2013. Only bats of the Phyllostomidae and Mormoopidae families were parasitized by ticks. The species Artibeus planirostris and Carolia perspicillata were the most parasitized. A total of 409 larvae were collected and classified into three genera: Antricola (n = 1, Nothoaspis (n = 1 and Ornithodoros (n = 407. Four species were morphologically identified as Nothoaspis amazoniensis, Ornithodoros cavernicolous, Ornithodoros fonsecai, Ornithodoros hasei, and Ornithodoros marinkellei. Ornithodoros hasei was the most common tick associated with bats in the current study. The present study expand the distributional ranges of at least three soft ticks into the Caatinga biome, and highlight an unexpected richness of argasid ticks inhabiting this arid ecosystem.

Aura-biomes are present in the water layer above coral reef benthic macro-organisms

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Kevin Walsh

2017-08-01

Full Text Available As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in coral cover. Here we investigated how multiple reef organisms influence microbial communities in the surrounding water column. Our study consisted of a field assessment of microbial communities above replicate patches dominated by a single macro-organism. Metagenomes were constructed from 20 L of water above distinct macro-organisms, including (1 the coral Mussismilia braziliensis, (2 fleshy macroalgae (Stypopodium, Dictota and Canistrocarpus, (3 turf algae, and (4 the zoanthid Palythoa caribaeorum and were compared to the water microbes collected 3 m above the reef. Microbial genera and functional potential were annotated using MG-RAST and showed that the dominant benthic macro-organisms influence the taxa and functions of microbes in the water column surrounding them, developing a specific “aura-biome”. The coral aura-biome reflected the open water column, and was associated with Synechococcus and functions suggesting oligotrophic growth, while the fleshy macroalgae aura-biome was associated with Ruegeria, Pseudomonas, and microbial functions suggesting low oxygen conditions. The turf algae aura-biome was associated with Vibrio, Flavobacterium, and functions suggesting pathogenic activity, while zoanthids were associated with Alteromonas and functions suggesting a stressful environment. Because each benthic organism has a distinct aura-biome, a change in benthic cover will change the microbial community of the water, which may lead to either the stimulation or suppression of the recruitment of benthic organisms.

The Australian terrestrial carbon budget

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V. Haverd

2013-02-01

Full Text Available This paper reports a study of the full carbon (C-CO₂ budget of the Australian continent, focussing on 1990–2011 in the context of estimates over two centuries. The work is a contribution to the RECCAP (REgional Carbon Cycle Assessment and Processes project, as one of numerous regional studies. In constructing the budget, we estimate the following component carbon fluxes: net primary production (NPP; net ecosystem production (NEP; fire; land use change (LUC; riverine export; dust export; harvest (wood, crop and livestock and fossil fuel emissions (both territorial and non-territorial. Major biospheric fluxes were derived using BIOS2 (Haverd et al., 2012, a fine-spatial-resolution (0.05° offline modelling environment in which predictions of CABLE (Wang et al., 2011, a sophisticated land surface model with carbon cycle, are constrained by multiple observation types. The mean NEP reveals that climate variability and rising CO₂ contributed 12 ± 24 (1σ error on mean and 68 ± 15 TgC yr⁻¹, respectively. However these gains were partially offset by fire and LUC (along with other minor fluxes, which caused net losses of 26 ± 4 TgC yr⁻¹ and 18 ± 7 TgC yr⁻¹, respectively. The resultant net biome production (NBP is 36 ± 29 TgC yr⁻¹, in which the largest contributions to uncertainty are NEP, fire and LUC. This NBP offset fossil fuel emissions (95 ± 6 TgC yr⁻¹ by 38 ± 30%. The interannual variability (IAV in the Australian carbon budget exceeds Australia's total carbon emissions by fossil fuel combustion and is dominated by IAV in NEP. Territorial fossil fuel emissions are significantly smaller than the rapidly growing fossil fuel exports: in 2009–2010, Australia exported 2.5 times more carbon in fossil fuels than it emitted by burning fossil fuels.

Aquatic ecosystem responses to Holocene climate change and biome development in boreal, central Asia

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Mackay, Anson W.; Bezrukova, Elena V.; Leng, Melanie J.; Meaney, Miriam; Nunes, Ana; Piotrowska, Natalia; Self, Angela; Shchetnikov, Alexander; Shilland, Ewan; Tarasov, Pavel; Wang, Luo; White, Dustin

2012-05-01

Boreal ecosystems are highly vulnerable to climate change, and severe ecological impacts in the near future are virtually certain to occur. We undertook a multiproxy study on an alpine lake (ESM-1) at the modern tree-line in boreal, southern Siberia. Steppe and tundra biomes were extensive in eastern Sayan landscapes during the early Holocene. Boreal forest quickly expanded by 9.1 ka BP, and dominated the landscape until c 0.7 ka BP, when the greatest period of compositional turnover occurred. At this time, alpine meadow landscape expanded and Picea obovata colonised new habitats along river valleys and lake shorelines, because of prevailing cool, moist conditions. During the early Holocene, chironomid assemblages were dominated by cold stenotherms. Diatoms for much of the Holocene were dominated by alkaliphilous, fragilarioid taxa, up until 0.2 ka BP, when epiphytic species expanded, indicative of increased habitat availability. C/N mass ratios ranged between 9.5 and 13.5 (11.1-15.8 C/N atomic ratios), indicative of algal communities dominating organic matter contributions to bottom sediments with small, persistent contributions from vascular plants. However, δ13C values increased steadily from -34.9‰ during the early Holocene (9.3 ka BP) to -24.8‰ by 0.6 ka BP. This large shift in magnitude may be due to a number of factors, including increasing within-lake productivity, increasing disequilibrium between the isotopic balance of the lake with the atmosphere as the lake became isotopically ‘mature’, and declining soil respiration linked to small, but distinct retreat in forest biomes. The influence of climatic variables on landscape vegetation was assessed using redundancy analysis (RDA), a linear, direct ordination technique. Changes in July insolation at 60 °N significantly explained over one-fifth of the variation in species composition, while changes in estimates of northern hemisphere temperature and ice-rafted debris events in the North Atlantic

A Study on the Quality and Identity of Brazilian Pampa Biome Honey: Evidences for Its Beneficial Effects against Oxidative Stress and Hyperglycemia

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L. C. Cruz

2014-01-01

Full Text Available We characterized, for the first time, the quality and identity of Brazilian Pampa biome honey and its antioxidant properties in vitro (FRAP, DDPH and ABTS. The potential protective effect of honey against oxidative stress induced by iron (Fe and paraquat, (PQ in a Drosophila melanogaster model (in vivo was also tested. The results indicated that all honey samples tested showed antioxidant activity in vitro. Flies treated with honey showed increased lifespan and were protected against oxidative stress induced by Fe and PQ. Despite the high concentration of sugars in honey (approximately 70–80%, our results demonstrate a hypoglycemic-like effect of honey in Drosophila. Thus, this study demonstrates the high quality of Brazilian Pampa biome honey as well as its significant antioxidant activity in vitro and in vivo, pointing to the potential use of this natural product as an alternative in the therapy of oxidative stress-associated diseases.

Tropical rainforest biome of Biosphere 2. Structure, composition and results of the first 2 years of operation

Energy Technology Data Exchange (ETDEWEB)

Leigh, Linda S. [Systems Ecology and Energy Analysis Program, Department of Environmental Engineering Sciences, University of Florida, Gainesville, FL (United States); Burgess, Tony; Marino, Bruno D.V.; Wei, Yong Dan [Biosphere 2 Center, Inc. P.O. Box 689, Oracle, AZ (United States)

1999-06-01

The tropical rainforest biome in the Biosphere 2 mesocosm was managed with rainfall and temperature conditions to simulate a natural rainforest typical of the new world tropics. The establishment of the biome was based on the introduction of excessive numbers of species allowing self-organization of an ecologically unique rainforest. Over 282 species of plants from rainforest areas were planted within the topographically diverse rainforest biome (area of 1900 m{sup 2}, volume of 35,000 m{sup 3}), just before the Biosphere 2 closure in 1991. Approximately 61% of these species survived when counted in 1993, representing a plant species richness reduction to 172 species in 0.19 hectare. Rank order graphs show that a high diversity community resulted not unlike insular rainforests. The plants of the rainforest mesocosm, however, grew under anomalous conditions of soil (amended desert grassland soil), atmospheric composition (CO{sub 2} up to 4500 ppm by volume (ppmv)) and rainwater composition (high salinity and nutrients). Stem growth rates of a dominant canopy tree, Cecropia, were up to four times higher but had reduced diameter at breast height compared to natural counterparts. Human intervention in plant succession was also an important factor in shaping the ecology of the rainforest biome of Biosphere 2

Spatial Distribution of Aboveground Carbon Stock of the Arboreal Vegetation in Brazilian Biomes of Savanna, Atlantic Forest and Semi-Arid Woodland.

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Scolforo, Henrique Ferraco; Scolforo, Jose Roberto Soares; Mello, Carlos Rogerio; Mello, Jose Marcio; Ferraz Filho, Antonio Carlos

2015-01-01

The objective of this study was to map the spatial distribution of aboveground carbon stock (using Regression-kriging) of arboreal plants in the Atlantic Forest, Semi-arid woodland, and Savanna Biomes in Minas Gerais State, southeastern Brazil. The database used in this study was obtained from 163 forest fragments, totaling 4,146 plots of 1,000 m2 distributed in these Biomes. A geographical model for carbon stock estimation was parameterized as a function of Biome, latitude and altitude. This model was applied over the samples and the residuals generated were mapped based on geostatistical procedures, selecting the exponential semivariogram theoretical model for conducting ordinary Kriging. The aboveground carbon stock was found to have a greater concentration in the north of the State, where the largest contingent of native vegetation is located, mainly the Savanna Biome, with Wooded Savanna and Shrub Savanna phytophysiognomes. The largest weighted averages of carbon stock per hectare were found in the south-center region (48.6 Mg/ha) and in the southern part of the eastern region (48.4 Mg/ha) of Minas Gerais State, due to the greatest predominance of Atlantic Forest Biome forest fragments. The smallest weighted averages per hectare were found in the central (21.2 Mg/ha), northern (20.4 Mg/ha), and northwestern (20.7 Mg/ha) regions of Minas Gerais State, where Savanna Biome fragments are predominant, in the phytophysiognomes Wooded Savanna and Shrub Savanna.

The future distribution of the savannah biome: model-based and biogeographic contingency.

Science.gov (United States)

Moncrieff, Glenn R; Scheiter, Simon; Langan, Liam; Trabucco, Antonio; Higgins, Steven I

2016-09-19

The extent of the savannah biome is expected to be profoundly altered by climatic change and increasing atmospheric CO2 concentrations. Contrasting projections are given when using different modelling approaches to estimate future distributions. Furthermore, biogeographic variation within savannahs in plant function and structure is expected to lead to divergent responses to global change. Hence the use of a single model with a single savannah tree type will likely lead to biased projections. Here we compare and contrast projections of South American, African and Australian savannah distributions from the physiologically based Thornley transport resistance statistical distribution model (TTR-SDM)-and three versions of a dynamic vegetation model (DVM) designed and parametrized separately for specific continents. We show that attempting to extrapolate any continent-specific model globally biases projections. By 2070, all DVMs generally project a decrease in the extent of savannahs at their boundary with forests, whereas the TTR-SDM projects a decrease in savannahs at their boundary with aridlands and grasslands. This difference is driven by forest and woodland expansion in response to rising atmospheric CO2 concentrations in DVMs, unaccounted for by the TTR-SDM. We suggest that the most suitable models of the savannah biome for future development are individual-based dynamic vegetation models designed for specific biogeographic regions.This article is part of the themed issue 'Tropical grassy biomes: linking ecology, human use and conservation'. © 2016 The Author(s).

Magnetic resonance as a local probe for linear bands in the Weyl semimetals NbP and TaP

Energy Technology Data Exchange (ETDEWEB)

Baenitz, Michael; Yasuoka, Hiroshi; Majumder, Mayukh; Shekhar, Chandra; Yan, Binghai; Felser, Claudia; Schmidt, Marcus [MPI for Chemical Physics of Solids, Dresden (Germany)

2016-07-01

Some compensated d-electron semimetals, for example the monophosphites NbP and TaP, with non centrosymmetric structure and with sizable spin orbit coupling (SOC) form a new class of material: the Weyl semimetals (WSM). A unique linear crossing of valence- and conduction- band in a single point in reciprocal space defines the so called Weyl point where the fermion mass vanishes theoretically. In real materials the Fermi level E{sub F} does not exactly match the Weyl node and as a consequence residual very light fermions are found. Due to the SOC these Weyl fermions have a chirality (handedness) on their linear dispersive (E ∝k) bands and frequently a linear density of states (DOS) at the Fermi level E{sub F}. We use NMR as a probe for this linear d- electron bands. The shift provides the s- and d- electron contributions to the DOS at E{sub F}, whereas the spin lattice relaxation is governed by low energy excitations around E{sub F}. {sup 31}P (I = 1/2) - Fourier - transform - and {sup 95}Nb (I = 9/2) - broadline - sweep - NMR studies are performed. We investigated powder samples as well as single crystals on both systems. The angular dependence of the {sup 95}Nb- and {sup 31}P - NMR lines is discussed.

Site-level evaluation of satellite-based global terrestrial gross primary production and net primary production monitoring.

Science.gov (United States)

David P. Turner; William D. Ritts; Warren B. Cohen; Thomas K. Maeirsperger; Stith T. Gower; Al A. Kirschbaum; Steve W. Runnings; Maosheng Zhaos; Steven C. Wofsy; Allison L. Dunn; Beverly E. Law; John L. Campbell; Walter C. Oechel; Hyo Jung Kwon; Tilden P. Meyers; Eric E. Small; Shirley A. Kurc; John A. Gamon

2005-01-01

Operational monitoring of global terrestrial gross primary production (GPP) and net primary production (NPP) is now underway using imagery from the satellite-borne Moderate Resolution Imaging Spectroradiometer (MODIS) sensor. Evaluation of MODIS GPP and NPP products will require site-level studies across a range of biomes, with close attention to numerous scaling...

A hierarchical analysis of terrestrial ecosystem model Biome-BGC: Equilibrium analysis and model calibration

Energy Technology Data Exchange (ETDEWEB)

Thornton, Peter E [ORNL; Wang, Weile [ORNL; Law, Beverly E. [Oregon State University; Nemani, Ramakrishna R [NASA Ames Research Center

2009-01-01

The increasing complexity of ecosystem models represents a major difficulty in tuning model parameters and analyzing simulated results. To address this problem, this study develops a hierarchical scheme that simplifies the Biome-BGC model into three functionally cascaded tiers and analyzes them sequentially. The first-tier model focuses on leaf-level ecophysiological processes; it simulates evapotranspiration and photosynthesis with prescribed leaf area index (LAI). The restriction on LAI is then lifted in the following two model tiers, which analyze how carbon and nitrogen is cycled at the whole-plant level (the second tier) and in all litter/soil pools (the third tier) to dynamically support the prescribed canopy. In particular, this study analyzes the steady state of these two model tiers by a set of equilibrium equations that are derived from Biome-BGC algorithms and are based on the principle of mass balance. Instead of spinning-up the model for thousands of climate years, these equations are able to estimate carbon/nitrogen stocks and fluxes of the target (steady-state) ecosystem directly from the results obtained by the first-tier model. The model hierarchy is examined with model experiments at four AmeriFlux sites. The results indicate that the proposed scheme can effectively calibrate Biome-BGC to simulate observed fluxes of evapotranspiration and photosynthesis; and the carbon/nitrogen stocks estimated by the equilibrium analysis approach are highly consistent with the results of model simulations. Therefore, the scheme developed in this study may serve as a practical guide to calibrate/analyze Biome-BGC; it also provides an efficient way to solve the problem of model spin-up, especially for applications over large regions. The same methodology may help analyze other similar ecosystem models as well.

The Economics of Root Distributions of Terrestrial Biomes in Response to Elevated CO2

Science.gov (United States)

Lu, M.; Hedin, L. O. O.

2017-12-01

Belowground root distributions of terrestrial biomes are central to understanding soil biogeochemical processes and land carbon sink. Yet models are thus far not able to predict root distributions across plant functional groups and major biomes, limiting our ability to predict the response of land systems to elevated CO2 concentration. Of particular concern is the apparent lack of stimulation of the aboveground carbon sink despite 30% increase of atmospheric CO2 over the past half-century, and despite the clear acceleration of the land carbon sink over the same period. This apparent discrepancy in land ecosystem response has led to the proposition that changes in belowground root dynamics might be responsible for the overlooked land sink. We here present a new modeling approach for predicting the response of root biomass and soil carbon storage to increased CO2. Our approach considers the first-principle mechanisms and tradeoffs by which plants and plant roots invest carbon to gain belowground resources, in collaboration with distinct root symbioses. We allow plants to locally compete for nutrients, with the ability to allocate biomass at different depths in the soil profile. We parameterized our model using an unprecedented global dataset of root traits, and validated our biome-level predictions with a recently updated global root biomass database. Our results support the idea that plants "dig deeper" when exposed to increased CO2, and we offer an economic-based mechanism for predicting the plant root response across soil conditions, plant functional groups and major biomes. Our model also recreates the observed responses across a range of free-air CO2 enrichment experiments, including a distinct response between plants associated with ectomycorrhizal and arbuscular mycorrhizal fungi. Most broadly, our findings suggest that roots may be increasingly important in the land carbon sink, and call for a greater effort to quantify belowground responses to elevated

Sorbate-nitrite interactions: acetonitrile oxide as an alkylating agent.

Science.gov (United States)

Pérez-Prior, M Teresa; Gómez-Bombarelli, Rafael; González-Pérez, Marina; Manso, José A; García-Santos, M Pilar; Calle, Emilio; Casado, Julio

2009-07-01

Because chemical species with DNA-damaging and mutagenic activity are formed in sorbate-nitrite mixtures and because sorbic acid sometimes coexists with nitrite occurring naturally or incorporated as a food additive, the study of sorbate-nitrite interactions is important. Here, the alkylating potential of the products resulting from such interactions was investigated. Drawn were the following conclusions: (i) Acetonitrile oxide (ACNO) is the compound responsible for the alkylating capacity of sorbate-nitrite mixtures; (ii) ACNO alkylates 4-(p-nitrobenzyl)pyridine (NBP), a trap for alkylating agents with nucleophilic characteristics similar to those of DNA bases, forming an adduct (AD; epsilon = 1.4 x 10(4) M(-1) cm(-1); lambda = 519 nm); (iii) the NBP alkylation reaction complies with the rate equation, r = d[AD]/dt = k(alk)(ACNO)[ACNO][NBP]-k(hyd)(AD)[AD], k(alk)(ACNO) being the NBP alkylation rate constant for ACNO and k(hyd)(AD) the rate constant for the adduct hydrolysis reaction; (iv) the small fraction of ACNO forming the adduct with NBP, as well as the small magnitude of the quotient (k(alk) (ACNO)/k(hyd)(ACNO)) as compared with those reported for other alkylating agents, such as some lactones and N-alkyl-N-nitrosoureas, reveals the ACNO effective alkylating capacity to be less significant; (v) the low value of the NBP-ACNO adduct life (defined as the total amount of adduct present along the progression of the NBP alkylation per unit of alkylating agent concentration) points to the high instability of this adduct; and (vi) the obtained results are in accordance with the low carcinogenicity of ACNO.

Improved clonality detection in Hodgkin lymphoma using a semi-nested modification of the BIOMED-2 PCR assay for IGH and IGK rearrangements: A paraffin-embedded tissue study.

Science.gov (United States)

Han, Shusen; Masaki, Ayako; Sakamoto, Yuma; Takino, Hisashi; Murase, Takayuki; Iida, Shinsuke; Inagaki, Hiroshi

2018-05-01

The BIOMED-2 PCR protocols targeting IGH and IGK genes may be useful for detecting clonality in Hodgkin lymphoma (HL). The clonality detection rates, however, have not been very high with these methods using paraffin-embedded tumor sections. We previously described the usefulness of the semi-nested BIOMED-2 IGH assay in B-cell malignancies. In this study, we devised a novel semi-nested BIOMED-2 IGK assay. Employing 58 cases of classical HL, we carried out the standard BIOMED-2, BIOMED-2 followed by BIOMED-2 re-amplification, and BIOMED-2 followed by semi-nested BIOMED-2, all targeting IGH and IGK, using paraffin-embedded tissues. In both IGH and IGK assays, semi-nested assays yielded significantly higher clonality detection rates than the standard assays and re-amplification assays. Clonality was detected in 13/58 (22.4%) classical HL cases using the standard IGH/IGK assays while it was detected in 38/58 (65.5%) cases using semi-nested IGH/IGK assays. The detection rates were not associated with the HL subtypes, CD30-positive cell density, CD20-positive cell density, or Epstein-Barr virus (EBV) positivity. In conclusion, tumor clonality was detected in nearly two-thirds of classical HL cases using semi-nested BIOMED-2 IGH/IGK assays using paraffin tumor sections. These semi-nested assays may be useful when the standard IGH/IGK assays fail to detect clonality in histopathologically suspected HLs. © 2018 Japanese Society of Pathology and John Wiley & Sons Australia, Ltd.

Carbon isotope discrimination of arctic and boreal biomes inferred from remote atmospheric measurements and a biosphere-atmosphere model - art. no. 1028

Energy Technology Data Exchange (ETDEWEB)

Randerson, J.T.; Still, C.J.; Balle, J.J.; Fung, I.Y.; Doney, S.C.; Tans, P.P.; Conway, T.J.; White, J.W.C.; Vaughn, B.; Suits, N.; Denning, A.S. [CALTECH, Pasadena, CA (United States). Div. of Geology & Planetary Science

2002-07-01

Estimating discrimination against C-13 during photosynthesis at landscape, regional, and biome scales is difficult because of large-scale variability in plant stress, vegetation composition, and photosynthetic pathway. The authors present estimates of C-13 discrimination for northern biomes based on a biosphere-atmosphere model and on National Oceanic and Atmospheric Administration Climate Monitoring and Diagnostics Laboratory and Institute of Arctic and Alpine Research remote flask measurements. With the inversion approach, solutions were found for three ecophysiological parameters of the northern biosphere {delta}{sup 13}C discrimination, a net primary production light use efficiency, and a temperature sensitivity of heterotrophic respiration (a Q10 factor) that provided a best fit between modeled and observed {delta}{sup 13}C and CO{sub 2}. The analysis attempted to explicitly correct for fossil fuel emissions, remote C4 ecosystem fluxes, ocean exchange, and isotopic disequilibria of terrestrial heterotrophic respiration caused by the Suess effect. A photosynthetic discrimination was obtained for arctic and boreal biomes between 19.0 and 19.6%. The inversion analysis suggests that Q10 and light use efficiency values that minimize the cost function covary. The optimal light use efficiency was 0.47 gC MJ{sup -1} photosynthetically active radiation, and the optimal Q10 value was 1.52. Fossil fuel and ocean exchange contributed proportionally more to month-to-month changes in the atmospheric growth rate of {delta}{sup 13}C and CO{sub 2} during winter months, suggesting that remote atmospheric observations during the summer may yield more precise estimates of the isotopic composition of the biosphere.

Cities as Novel Biomes;Recognizing Urban Ecosystem Services as Anthropogenic

Directory of Open Access Journals (Sweden)

Stephanie ePincetl

2015-12-01

Full Text Available Urban Ecosystem Science is now an established science, arising along side the historic shift of humans to becoming in majority urban dwellers. In this Perspective I suggest there is a need to develop a new framework for UES as embedded in distinct urban biomes that can be classified by city-type and typologized. UES are largely the artifact of human decision making from what to plant where, to determining the urban infrastructure type in which UES will be placed. Developing urban typologies by climate zone, level of development, size and history will better enable the understanding of UES. I attempt to show the rise of the importance of nature, and of urban nature following the development of industrial city, and the importance of human intent in creating these urban ecosystems over time. If humans choose to manage cities through increasing UES, this will require coupled shifts, the shift in rules and regulations, goals and processes and shifts in urban form, infrastructure and function – socio-technical-ecological changes – driven by human decision-making. Such efforts will vary widely by city -- by urban biome.

Biogeographical distribution analysis of hydrocarbon degrading and biosurfactant producing genes suggests that near-equatorial biomes have higher abundance of genes with potential for bioremediation.

Science.gov (United States)

Oliveira, Jorge S; Araújo, Wydemberg J; Figueiredo, Ricardo M; Silva-Portela, Rita C B; de Brito Guerra, Alaine; da Silva Araújo, Sinara Carla; Minnicelli, Carolina; Carlos, Aline Cardoso; de Vasconcelos, Ana Tereza Ribeiro; Freitas, Ana Teresa; Agnez-Lima, Lucymara F

2017-07-27

Bacterial and Archaeal communities have a complex, symbiotic role in crude oil bioremediation. Their biosurfactants and degradation enzymes have been in the spotlight, mainly due to the awareness of ecosystem pollution caused by crude oil accidents and their use. Initially, the scientific community studied the role of individual microbial species by characterizing and optimizing their biosurfactant and oil degradation genes, studying their individual distribution. However, with the advances in genomics, in particular with the use of New-Generation-Sequencing and Metagenomics, it is now possible to have a macro view of the complex pathways related to the symbiotic degradation of hydrocarbons and surfactant production. It is now possible, although more challenging, to obtain the DNA information of an entire microbial community before automatically characterizing it. By characterizing and understanding the interconnected role of microorganisms and the role of degradation and biosurfactant genes in an ecosystem, it becomes possible to develop new biotechnological approaches for bioremediation use. This paper analyzes 46 different metagenome samples, spanning 20 biomes from different geographies obtained from different research projects. A metagenomics bioinformatics pipeline, focused on the biodegradation and biosurfactant-production pathways, genes and organisms, was applied. Our main results show that: (1) surfactation and degradation are correlated events, and therefore should be studied together; (2) terrestrial biomes present more degradation genes, especially cyclic compounds, and less surfactation genes, when compared to water biomes; and (3) latitude has a significant influence on the diversity of genes involved in biodegradation and biosurfactant production. This suggests that microbiomes found near the equator are richer in genes that have a role in these processes and thus have a higher biotechnological potential. In this work we have focused on the

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.

Science.gov (United States)

Angly, Florent E; Willner, Dana; Prieto-Davó, Alejandra; Edwards, Robert A; Schmieder, Robert; Vega-Thurber, Rebecca; Antonopoulos, Dionysios A; Barott, Katie; Cottrell, Matthew T; Desnues, Christelle; Dinsdale, Elizabeth A; Furlan, Mike; Haynes, Matthew; Henn, Matthew R; Hu, Yongfei; Kirchman, David L; McDole, Tracey; McPherson, John D; Meyer, Folker; Miller, R Michael; Mundt, Egbert; Naviaux, Robert K; Rodriguez-Mueller, Beltran; Stevens, Rick; Wegley, Linda; Zhang, Lixin; Zhu, Baoli; Rohwer, Forest

2009-12-01

Metagenomic studies characterize both the composition and diversity of uncultured viral and microbial communities. BLAST-based comparisons have typically been used for such analyses; however, sampling biases, high percentages of unknown sequences, and the use of arbitrary thresholds to find significant similarities can decrease the accuracy and validity of estimates. Here, we present Genome relative Abundance and Average Size (GAAS), a complete software package that provides improved estimates of community composition and average genome length for metagenomes in both textual and graphical formats. GAAS implements a novel methodology to control for sampling bias via length normalization, to adjust for multiple BLAST similarities by similarity weighting, and to select significant similarities using relative alignment lengths. In benchmark tests, the GAAS method was robust to both high percentages of unknown sequences and to variations in metagenomic sequence read lengths. Re-analysis of the Sargasso Sea virome using GAAS indicated that standard methodologies for metagenomic analysis may dramatically underestimate the abundance and importance of organisms with small genomes in environmental systems. Using GAAS, we conducted a meta-analysis of microbial and viral average genome lengths in over 150 metagenomes from four biomes to determine whether genome lengths vary consistently between and within biomes, and between microbial and viral communities from the same environment. Significant differences between biomes and within aquatic sub-biomes (oceans, hypersaline systems, freshwater, and microbialites) suggested that average genome length is a fundamental property of environments driven by factors at the sub-biome level. The behavior of paired viral and microbial metagenomes from the same environment indicated that microbial and viral average genome sizes are independent of each other, but indicative of community responses to stressors and environmental conditions.

Modeling impacts of human footprint and soil variability on the potential distribution of invasive plant species in different biomes

Science.gov (United States)

Wan, Ji-Zhong; Wang, Chun-Jing; Yu, Fei-Hai

2017-11-01

Human footprint and soil variability may be important in shaping the spread of invasive plant species (IPS). However, until now, there is little knowledge on how human footprint and soil variability affect the potential distribution of IPS in different biomes. We used Maxent modeling to project the potential distribution of 29 IPS with wide distributions and long introduction histories in China based on various combinations of climatic correlates, soil characteristics and human footprint. Then, we evaluated the relative importance of each type of environmental variables (climate, soil and human footprint) as well as the difference in range and similarity of the potential distribution of IPS between different biomes. Human footprint and soil variables contributed to the prediction of the potential distribution of IPS, and different types of biomes had varying responses and degrees of impacts from the tested variables. Human footprint and soil variability had the highest tendency to increase the potential distribution of IPS in Montane Grasslands and Shrublands. We propose to integrate the assessment in impacts of human footprint and soil variability on the potential distribution of IPS in different biomes into the prevention and control of plant invasion.

Vegetation of the Hantam-Tanqua-Roggeveld subregion, South Africa Part 2: Succulent Karoo Biome related vegetation

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Helga van der Merwe

2009-03-01

Full Text Available The Hantam-Tanqua-Roggeveld subregion lies within the Succulent Karoo Hotspot that stretches along the western side of the Republic of South Africa and Namibia. This project, carried out to document the botanical diversity in the Hantam-Tanqua-Roggeveld subregion, was part of a project identified as a priority during the SKEP (Succulent Karoo Ecosystem Programme initiative in this Hotspot. Botanical surveys were conducted in an area covering over three million hectares. Satellite images of the area and topocadastral, land type and geology maps were used to stratify the area into relatively homogeneous units. An analysis of the floristic data of 390 sample plots identified two major floristic units, i.e. the Fynbos Biome related vegetation and the Succulent Karoo Biome related vegetation. A description of the vegetation related to the Succulent Karoo Biome is presented in this article. Seven associations, 16 subassociations and several mosaic vegetation units, consisting of more than one vegetation unit, were identified and mapped. Various threats to the vegetation in the region were identified during the survey and are briefly discussed.

ANTIBACTERIAL POTENTIAL OF NATIVE PLANTS FROM THE CAATINGA BIOME AGAINST Staphylococcus spp. ISOLATES FROM SMALL RUMINANTS WITH MASTITIS

OpenAIRE

PEIXOTO, RODOLFO DE MORAES; SILVA, WELLINGTON ERASMO LIMA E; ALMEIDA, JACKSON ROBERTO GUEDES SILVA; BRANCO, ALEXSANDRO; COSTA, MATEUS MATIUZZI DA

2016-01-01

ABSTRACT The aim of the present study is to assess the antibacterial potential of plants from the Caatinga biome of the semi-arid region of Pernambuco, against Staphylococcus spp. isolates from cases of subclinical mastitis in small ruminants, such as goats and ewes. Ethanolic extracts of the following plants from the Caatinga biome were used: Encholirium spectabile Mart., Bromelia laciniosa Mart., Neoglaziovia variegata Mez., Amburana cearensis (Fr. Allem.) A. C. Smith, Hymenaea martiana Hay...

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.

Directory of Open Access Journals (Sweden)

Florent E Angly

2009-12-01

Full Text Available Metagenomic studies characterize both the composition and diversity of uncultured viral and microbial communities. BLAST-based comparisons have typically been used for such analyses; however, sampling biases, high percentages of unknown sequences, and the use of arbitrary thresholds to find significant similarities can decrease the accuracy and validity of estimates. Here, we present Genome relative Abundance and Average Size (GAAS, a complete software package that provides improved estimates of community composition and average genome length for metagenomes in both textual and graphical formats. GAAS implements a novel methodology to control for sampling bias via length normalization, to adjust for multiple BLAST similarities by similarity weighting, and to select significant similarities using relative alignment lengths. In benchmark tests, the GAAS method was robust to both high percentages of unknown sequences and to variations in metagenomic sequence read lengths. Re-analysis of the Sargasso Sea virome using GAAS indicated that standard methodologies for metagenomic analysis may dramatically underestimate the abundance and importance of organisms with small genomes in environmental systems. Using GAAS, we conducted a meta-analysis of microbial and viral average genome lengths in over 150 metagenomes from four biomes to determine whether genome lengths vary consistently between and within biomes, and between microbial and viral communities from the same environment. Significant differences between biomes and within aquatic sub-biomes (oceans, hypersaline systems, freshwater, and microbialites suggested that average genome length is a fundamental property of environments driven by factors at the sub-biome level. The behavior of paired viral and microbial metagenomes from the same environment indicated that microbial and viral average genome sizes are independent of each other, but indicative of community responses to stressors and

Softball Games Bring NCI and Leidos Biomed Employees Together | Poster

Science.gov (United States)

NCI and Leidos Biomed employees took to the fields at Nallin Pond for the third annual slow-pitch softball games on August 26. The series attracted 54 employees who were divided into four teams, Red, Blue, Gray, and White, and they were cheered on by about 40 enthusiastic spectators. In the first set of games, the Gray team defeated the Blue team, 15–8, and the White team

Are there consistent grazing indicators in Drylands? Testing plant functional types of various complexity in South Africa's Grassland and Savanna Biomes.

Science.gov (United States)

Linstädter, Anja; Schellberg, Jürgen; Brüser, Katharina; Moreno García, Cristian A; Oomen, Roelof J; du Preez, Chris C; Ruppert, Jan C; Ewert, Frank

2014-01-01

Despite our growing knowledge on plants' functional responses to grazing, there is no consensus if an optimum level of functional aggregation exists for detecting grazing effects in drylands. With a comparative approach we searched for plant functional types (PFTs) with a consistent response to grazing across two areas differing in climatic aridity, situated in South Africa's grassland and savanna biomes. We aggregated herbaceous species into PFTs, using hierarchical combinations of traits (from single- to three-trait PFTs). Traits relate to life history, growth form and leaf width. We first confirmed that soil and grazing gradients were largely independent from each other, and then searched in each biome for PFTs with a sensitive response to grazing, avoiding confounding with soil conditions. We found no response consistency, but biome-specific optimum aggregation levels. Three-trait PFTs (e.g. broad-leaved perennial grasses) and two-trait PFTs (e.g. perennial grasses) performed best as indicators of grazing effects in the semi-arid grassland and in the arid savanna biome, respectively. Some PFTs increased with grazing pressure in the grassland, but decreased in the savanna. We applied biome-specific grazing indicators to evaluate if differences in grazing management related to land tenure (communal versus freehold) had effects on vegetation. Tenure effects were small, which we mainly attributed to large variability in grazing pressure across farms. We conclude that the striking lack of generalizable PFT responses to grazing is due to a convergence of aridity and grazing effects, and unlikely to be overcome by more refined classification approaches. Hence, PFTs with an opposite response to grazing in the two biomes rather have a unimodal response along a gradient of additive forces of aridity and grazing. The study advocates for hierarchical trait combinations to identify localized indicator sets for grazing effects. Its methodological approach may also be useful

Expression cloning of camelid nanobodies specific for Xenopus embryonic antigens.

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Keiji Itoh

Full Text Available Developmental biology relies heavily on the use of conventional antibodies, but their production and maintenance involves significant effort. Here we use an expression cloning approach to identify variable regions of llama single domain antibodies (known as nanobodies, which recognize specific embryonic antigens. A nanobody cDNA library was prepared from lymphocytes of a llama immunized with Xenopus embryo lysates. Pools of bacterially expressed cDNAs were sib-selected for the ability to produce specific staining patterns in gastrula embryos. Three different nanobodies were isolated: NbP1 and NbP3 stained yolk granules, while the reactivity of NbP7 was predominantly restricted to the cytoplasm and the cortex. The isolated nanobodies recognized specific protein bands in immunoblot analysis. A reverse proteomic approach identified NbP1 target antigen as EP45/Seryp, a serine protease inhibitor. Given the unique stability of nanobodies and the ease of their expression in diverse systems, we propose that nanobody cDNA libraries represent a promising resource for molecular markers for developmental biology.

Seasonal patterns of horse fly richness and abundance in the Pampa biome of southern Brazil.

Science.gov (United States)

Krüger, Rodrigo Ferreira; Krolow, Tiago Kütter

2015-12-01

Fluctuations in seasonal patterns of horse fly populations were examined in rainforests of tropical South America, where the climate is seasonal. These patterns were evaluated with robust analytical models rather than identifying the main factors that influenced the fluctuations. We examined the seasonality of populations of horse flies in fields and lowland areas of the Pampa biome of southern Brazil with generalized linear models. We also investigated the diversity of these flies and the sampling effort of Malaise traps in this biome over two years. All of the 29 species had clear seasonality with regard to occurrence and abundance, but only seven species were identified as being influenced by temperature and humidity. The sampling was sufficient and the estimated diversity was 10% more than observed. Seasonal trends were synchronized across species and the populations were most abundant between September and March and nearly zero in other months. While previous studies demonstrated that seasonal patterns in population fluctuations are correlated with climatic conditions in horse fly assemblages in South America rainforests, we show a clear effect of each factor on richness and abundance and the seasonality in the prevalence of horse fly assemblages in localities of the Pampa biome. © 2015 The Society for Vector Ecology.

Temporal profiles of vegetation indices for characterizing grazing intensity on natural grasslands in Pampa biome

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Amanda Heemann Junges

2016-08-01

Full Text Available ABSTRACT The Pampa biome is an important ecosystem in Brazil that is highly relevant to livestock production. The objective of this study was to analyze the potential use of vegetation indices to discriminate grazing intensities on natural grasslands in the Pampa biome. Moderate Resolution Imaging Spectroradiometer (MODIS Normalized Difference Vegetation Index (NDVI and Enhanced Vegetation Index (EVI images from Jan to Dec, 2000 to 2013 series, were analyzed for natural grassland experimental units managed under high (forage allowance of 5 ± 2 % live weight – LW, moderate (13 ± 5 % LW and low grazing intensity (19 ± 7 % LW. Regardless of intensity, the temporal profiles showed lower NDVI and EVI during winter, increased values in spring because of summer species regrowth, slightly decreased values in summer, especially in years when there is a water deficit, and increased values in the fall associated with the beginning of winter forage development. The average temporal profiles of moderate grazing intensity exhibited greater vegetation index values compared with low and high grazing intensities. The temporal profiles of less vegetation index were associated with lower green biomass accumulation caused by the negative impact of stocking rates on the leaf area index under high grazing intensity and a floristic composition with a predominance of tussocks under low grazing intensity. Vegetation indices can be used for distinguishing moderate grazing intensity from low and high intensities. The average EVI values can discriminate moderate grazing intensity during any season, and the NDVI values can discriminate moderate grazing intensity during spring and winter.

Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years

Science.gov (United States)

Marchant, R.; Harrison, S.P.; Hooghiemstra, H.; Markgraf, Vera; Van Boxel, J. H.; Ager, T.; Almeida, L.; Anderson, R.; Baied, C.; Behling, H.; Berrio, J.C.; Burbridge, R.; Bjorck, S.; Byrne, R.; Bush, M.B.; Cleef, A.M.; Duivenvoorden, J.F.; Flenley, J.R.; De Oliveira, P.; Van Geel, B.; Graf, K.J.; Gosling, W.D.; Harbele, S.; Van Der Hammen, T.; Hansen, B.C.S.; Horn, S.P.; Islebe, G.A.; Kuhry, P.; Ledru, M.-P.; Mayle, F.E.; Leyden, B.W.; Lozano-Garcia, S.; Melief, A.B.M.; Moreno, P.; Moar, N.T.; Prieto, A.; Van Reenen, G. B.; Salgado-Labouriau, M. L.; Schasignbitz, F.; Schreve-Brinkman, E. J.; Wille, M.

2009-01-01

The biomisation method is used to reconstruct Latin American vegetation at 6000±500 and 18 000±1000 radiocarbon years before present (14C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000±500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000±500 14C yr BP reconstruction are comparatively small. Patterns of change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America also show a change in biome assignment to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucat??n peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000±1000 14C yr BP 61 samples from 34 sites record vegetation that reflects a generally cool and dry environment. Cool grass/shrubland prevalent in southeast Brazil, Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate

Improving Global Gross Primary Productivity Estimates by Computing Optimum Light Use Efficiencies Using Flux Tower Data

Science.gov (United States)

Madani, Nima; Kimball, John S.; Running, Steven W.

2017-11-01

In the light use efficiency (LUE) approach of estimating the gross primary productivity (GPP), plant productivity is linearly related to absorbed photosynthetically active radiation assuming that plants absorb and convert solar energy into biomass within a maximum LUE (LUEmax) rate, which is assumed to vary conservatively within a given biome type. However, it has been shown that photosynthetic efficiency can vary within biomes. In this study, we used 149 global CO2 flux towers to derive the optimum LUE (LUEopt) under prevailing climate conditions for each tower location, stratified according to model training and test sites. Unlike LUEmax, LUEopt varies according to heterogeneous landscape characteristics and species traits. The LUEopt data showed large spatial variability within and between biome types, so that a simple biome classification explained only 29% of LUEopt variability over 95 global tower training sites. The use of explanatory variables in a mixed effect regression model explained 62.2% of the spatial variability in tower LUEopt data. The resulting regression model was used for global extrapolation of the LUEopt data and GPP estimation. The GPP estimated using the new LUEopt map showed significant improvement relative to global tower data, including a 15% R2 increase and 34% root-mean-square error reduction relative to baseline GPP calculations derived from biome-specific LUEmax constants. The new global LUEopt map is expected to improve the performance of LUE-based GPP algorithms for better assessment and monitoring of global terrestrial productivity and carbon dynamics.

Himalayan uplift shaped biomes in Miocene temperate Asia: evidence from leguminous Caragana

Science.gov (United States)

Ming-Li Zhang; Xiao-Guo Xiang; Juan-Juan Xue; Stewart C. Sanderson; Peter W. Fritsch

2016-01-01

Caragana, with distinctive variation in leaf and rachis characters, exhibits three centers of geographic distribution, i.e., Central Asia, the Qinghai-Tibetan Plateau (QTP), and East Asia, corresponding to distinct biomes. Because Caragana species are often ecologically dominant components of the vegetation in these regions, it is regarded as a key taxon for...

Selection of native trees for intercropping with coffee in the Atlantic Rainforest biome

NARCIS (Netherlands)

Souza, de H.N.; Cardoso, I.M.; Fernandes, J.M.; Garcia, F.C.P.; Bonfim, V.R.; Santos, A.C.; Carvalho, A.F.; Mendonca, E.S.

2010-01-01

A challenge in establishing agroforestry systems is ensuring that farmers are interested in the tree species, and are aware of how to adequately manage these species. This challenge was tackled in the Atlantic Rainforest biome (Brazil), where a participatory trial with agroforestry coffee systems

Análisis comparativo de distintas toolkits para el reconocimiento biométrico de personas mediante voz

OpenAIRE

Ruíz, Silvia; Miranda, Ernesto; Herlein, Mauro; Etchart, Graciela; Alvez, Carlos E.

2017-01-01

El objetivo de este trabajo es realizar un análisis comparativo de distintas toolkits para el reconocimiento biométrico de personas mediante voz. Hoy en día los sistemas de identificación de personas se han convertido en una necesidad para la sociedad. A medida que avanza la tecnología y la aplicación de la misma en entornos tanto de ocio como de seguridad, la evolución en desarrollo biométrico es muy grande. Los sistemas de identificación o verificación tradicionales (tarjetas o claves) se h...

The role of plant functional trade-offs for biodiversity changes and biome shifts under scenarios of global climatic change

Directory of Open Access Journals (Sweden)

B. Reu

2011-05-01

Full Text Available The global geographic distribution of biodiversity and biomes is determined by species-specific physiological tolerances to climatic constraints. Current vegetation models employ empirical bioclimatic relationships to predict present-day vegetation patterns and to forecast biodiversity changes and biome shifts under climatic change. In this paper, we consider trade-offs in plant functioning and their responses under climatic changes to forecast and explain changes in plant functional richness and shifts in biome geographic distributions.

The Jena Diversity model (JeDi simulates plant survival according to essential plant functional trade-offs, including ecophysiological processes such as water uptake, photosynthesis, allocation, reproduction and phenology. We use JeDi to quantify changes in plant functional richness and biome shifts between present-day and a range of possible future climates from two SRES emission scenarios (A2 and B1 and seven global climate models using metrics of plant functional richness and functional identity.

Our results show (i a significant loss of plant functional richness in the tropics, (ii an increase in plant functional richness at mid and high latitudes, and (iii a pole-ward shift of biomes. While these results are consistent with the findings of empirical approaches, we are able to explain them in terms of the plant functional trade-offs involved in the allocation, metabolic and reproduction strategies of plants. We conclude that general aspects of plant physiological tolerances can be derived from functional trade-offs, which may provide a useful process- and trait-based alternative to bioclimatic relationships. Such a mechanistic approach may be particularly relevant when addressing vegetation responses to climatic changes that encounter novel combinations of climate parameters that do not exist under contemporary climate.

Convergence in the temperature response of leaf respiration across biomes and plant functional types.

Science.gov (United States)

Heskel, Mary A; O'Sullivan, Odhran S; Reich, Peter B; Tjoelker, Mark G; Weerasinghe, Lasantha K; Penillard, Aurore; Egerton, John J G; Creek, Danielle; Bloomfield, Keith J; Xiang, Jen; Sinca, Felipe; Stangl, Zsofia R; Martinez-de la Torre, Alberto; Griffin, Kevin L; Huntingford, Chris; Hurry, Vaughan; Meir, Patrick; Turnbull, Matthew H; Atkin, Owen K

2016-04-05

Plant respiration constitutes a massive carbon flux to the atmosphere, and a major control on the evolution of the global carbon cycle. It therefore has the potential to modulate levels of climate change due to the human burning of fossil fuels. Neither current physiological nor terrestrial biosphere models adequately describe its short-term temperature response, and even minor differences in the shape of the response curve can significantly impact estimates of ecosystem carbon release and/or storage. Given this, it is critical to establish whether there are predictable patterns in the shape of the respiration-temperature response curve, and thus in the intrinsic temperature sensitivity of respiration across the globe. Analyzing measurements in a comprehensive database for 231 species spanning 7 biomes, we demonstrate that temperature-dependent increases in leaf respiration do not follow a commonly used exponential function. Instead, we find a decelerating function as leaves warm, reflecting a declining sensitivity to higher temperatures that is remarkably uniform across all biomes and plant functional types. Such convergence in the temperature sensitivity of leaf respiration suggests that there are universally applicable controls on the temperature response of plant energy metabolism, such that a single new function can predict the temperature dependence of leaf respiration for global vegetation. This simple function enables straightforward description of plant respiration in the land-surface components of coupled earth system models. Our cross-biome analyses shows significant implications for such fluxes in cold climates, generally projecting lower values compared with previous estimates.

Grassland production under global change scenarios for New Zealand pastoral agriculture

Science.gov (United States)

Keller, E. D.; Baisden, W. T.; Timar, L.; Mullan, B.; Clark, A.

2014-10-01

We adapt and integrate the Biome-BGC and Land Use in Rural New Zealand models to simulate pastoral agriculture and to make land-use change, intensification of agricultural activity and climate change scenario projections of New Zealand's pasture production at time slices centred on 2020, 2050 and 2100, with comparison to a present-day baseline. Biome-BGC model parameters are optimised for pasture production in both dairy and sheep/beef farm systems, representing a new application of the Biome-BGC model. Results show up to a 10% increase in New Zealand's national pasture production in 2020 under intensification and a 1-2% increase by 2050 from economic factors driving land-use change. Climate change scenarios using statistically downscaled global climate models (GCMs) from the IPCC Fourth Assessment Report also show national increases of 1-2% in 2050, with significant regional variations. Projected out to 2100, however, these scenarios are more sensitive to the type of pasture system and the severity of warming: dairy systems show an increase in production of 4% under mild change but a decline of 1% under a more extreme case, whereas sheep/beef production declines in both cases by 3 and 13%, respectively. Our results suggest that high-fertility systems such as dairying could be more resilient under future change, with dairy production increasing or only slightly declining in all of our scenarios. These are the first national-scale estimates using a model to evaluate the joint effects of climate change, CO2 fertilisation and N-cycle feedbacks on New Zealand's unique pastoral production systems that dominate the nation's agriculture and economy. Model results emphasise that CO2 fertilisation and N-cycle feedback effects are responsible for meaningful differences in agricultural systems. More broadly, we demonstrate that our model output enables analysis of decoupled land-use change scenarios: the Biome-BGC data products at a national or regional level can be re

Identification of novel mammalian hosts and Brazilian biome geographic distribution of Trypanosoma cruzi TcIII and TcIV.

Science.gov (United States)

Barros, Juliana Helena S; Xavier, Samanta Cristina C; Bilac, Daniele; Lima, Valdirene Santos; Dario, Maria Augusta; Jansen, Ana Maria

2017-08-01

Trypanosoma cruzi is a parasitic protozoan responsible for Chagas disease. Seven different Discrete Typing Units (DTUs) of T. cruzi are currently identified in nature: TcI-TcVI, and TcBat whose distribution patterns in nature, hosts/reservoirs and eco-epidemiological importance are still little known. Here, we present novel data on the geographic distribution and diversity of mammalian hosts and vectors of T. cruzi DTUs TcIII and TcIV. In this study, we analyzed 61 T. cruzi isolates obtained from 18 species of mammals (five orders) and two Hemiptera genera. Samples were collected from five Brazilian biomes (Pantanal, Caatinga, Cerrado, Atlantic Rainforest, and Amazon) previously characterized as Z3 or mixed infection (TcI-Z3) by mini-exon gene PCR. To identify TcIII and TcIV genotypes, we applied restriction fragment length polymorphism analysis to the PCR-amplified histone 3 gene. DTUs TcIII and TcIV were identified in single and mixed infections from wide dispersion throughout five Brazilian biomes studied, with TcIV being the most common. Pantanal was the biome that displayed the largest number of samples characterized as TcIII and TcIV in single and mixed infections, followed by Atlantic Rainforest and Amazon. Species from the Didelphimorphia order displayed the highest frequency of infection and were found in all five biomes. We report, for the first time, the infection of a species of the Artiodactyla order by DTU TcIII. In addition, we describe new host species: five mammals (marsupials and rodents) and two genera of Hemiptera. Our data indicate that DTUs TcIII and TcIV are more widespread and infect a larger number of mammalian species than previously thought. In addition, they are transmitted in restricted foci and cycles, but in different microhabitats and areas with distinct ecological profiles. Finally, we show that DTUs TcIII and TcIV do not present any specific association with biomes or host species. Copyright © 2017. Published by Elsevier B.V.

Plant phylogeny as a window on the evolution of hyperdiversity in the tropical rainforest biome.

Science.gov (United States)

Eiserhardt, Wolf L; Couvreur, Thomas L P; Baker, William J

2017-06-01

I. II. III. IV. V. VI. VII. VIII. IX. References SUMMARY: Tropical rainforest (TRF) is the most species-rich terrestrial biome on Earth, harbouring just under half of the world's plant species in c. 7% of the land surface. Phylogenetic trees provide important insights into mechanisms underpinning TRF hyperdiversity that are complementary to those obtained from the fossil record. Phylogenetic studies of TRF plant diversity have mainly focused on whether this biome is an evolutionary 'cradle' or 'museum', emphasizing speciation and extinction rates. However, other explanations, such as biome age, immigration and ecological limits, must also be considered. We present a conceptual framework for addressing the drivers of TRF diversity, and review plant studies that have tested them with phylogenetic data. Although surprisingly few in number, these studies point to old age of TRF, low extinction and high speciation rates as credible drivers of TRF hyperdiversity. There is less evidence for immigration and ecological limits, but these cannot be dismissed owing to the limited number of studies. Rapid methodological developments in DNA sequencing, macroevolutionary analysis and the integration of phylogenetics with other disciplines may improve our grasp of TRF hyperdiversity in the future. However, such advances are critically dependent on fundamental systematic research, yielding numerous, additional, well-sampled phylogenies of TRF lineages. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Accounting for Forest Harvest and Wildfire in a Spatially-distributed Carbon Cycle Process Model

Science.gov (United States)

Turner, D. P.; Ritts, W.; Kennedy, R. E.; Yang, Z.; Law, B. E.

2009-12-01

Forests are subject to natural disturbances in the form of wildfire, as well as management-related disturbances in the form of timber harvest. These disturbance events have strong impacts on local and regional carbon budgets, but quantifying the associated carbon fluxes remains challenging. The ORCA Project aims to quantify regional net ecosystem production (NEP) and net biome production (NBP) in Oregon, California, and Washington, and we have adopted an integrated approach based on Landsat imagery and ecosystem modeling. To account for stand-level carbon fluxes, the Biome-BGC model has been adapted to simulate multiple severities of fire and harvest. New variables include snags, direct fire emissions, and harvest removals. New parameters include fire-intensity-specific combustion factors for each carbon pool (based on field measurements) and proportional removal rates for harvest events. To quantify regional fluxes, the model is applied in a spatially-distributed mode over the domain of interest, with disturbance history derived from a time series of Landsat images. In stand-level simulations, the post disturbance transition from negative (source) to positive (sink) NEP is delayed approximately a decade in the case of high severity fire compared to harvest. Simulated direct pyrogenic emissions range from 11 to 25 % of total non-soil ecosystem carbon. In spatial mode application over Oregon and California, the sum of annual pyrogenic emissions and harvest removals was generally less that half of total NEP, resulting in significant carbon sequestration on the land base. Spatially and temporally explicit simulation of disturbance-related carbon fluxes will contribute to our ability to evaluate effects of management on regional carbon flux, and in our ability to assess potential biospheric feedbacks to climate change mediated by changing disturbance regimes.

Are there consistent grazing indicators in Drylands? Testing plant functional types of various complexity in South Africa's Grassland and Savanna Biomes.

Directory of Open Access Journals (Sweden)

Anja Linstädter

Full Text Available Despite our growing knowledge on plants' functional responses to grazing, there is no consensus if an optimum level of functional aggregation exists for detecting grazing effects in drylands. With a comparative approach we searched for plant functional types (PFTs with a consistent response to grazing across two areas differing in climatic aridity, situated in South Africa's grassland and savanna biomes. We aggregated herbaceous species into PFTs, using hierarchical combinations of traits (from single- to three-trait PFTs. Traits relate to life history, growth form and leaf width. We first confirmed that soil and grazing gradients were largely independent from each other, and then searched in each biome for PFTs with a sensitive response to grazing, avoiding confounding with soil conditions. We found no response consistency, but biome-specific optimum aggregation levels. Three-trait PFTs (e.g. broad-leaved perennial grasses and two-trait PFTs (e.g. perennial grasses performed best as indicators of grazing effects in the semi-arid grassland and in the arid savanna biome, respectively. Some PFTs increased with grazing pressure in the grassland, but decreased in the savanna. We applied biome-specific grazing indicators to evaluate if differences in grazing management related to land tenure (communal versus freehold had effects on vegetation. Tenure effects were small, which we mainly attributed to large variability in grazing pressure across farms. We conclude that the striking lack of generalizable PFT responses to grazing is due to a convergence of aridity and grazing effects, and unlikely to be overcome by more refined classification approaches. Hence, PFTs with an opposite response to grazing in the two biomes rather have a unimodal response along a gradient of additive forces of aridity and grazing. The study advocates for hierarchical trait combinations to identify localized indicator sets for grazing effects. Its methodological approach may

The impact of the North American shale gas revolution on regional natural gas markets: Evidence from the regime-switching model

International Nuclear Information System (INIS)

Geng, Jiang-Bo; Ji, Qiang; Fan, Ying

2016-01-01

This paper investigates the impact of the North American shale gas revolution on price movement regimes in the North American and European gas markets, using the Markov regime-switching model. It then measures price spreads between oil and gas from 1998 to 2015 to identify the impact of the revolution on the relationship between oil and regional gas prices. The results show that the typical movement regime of Henry Hub prices changes from 'slightly upward' to 'sharply downward'. In addition, the clear seasonal effect of Henry Hub prices has disappeared after the shale gas revolution. The typical movement of national balancing point (NBP) prices has changed gradually from a 'sharply upward' regime to the alternative regimes between 'sharply downward' and 'slightly upward', tending to follow oil prices. This indicates that the shale gas revolution has had little impact on NBP price movement. Meanwhile, Henry Hub prices have decoupled from WTI prices, while NBP and Brent prices have continued to exhibit a long-term equilibrium level around which they have swung in the short time-frame since the shale gas revolution. Pertinent energy policy makers and energy market participants should pay attention to these changes and adjust their trade, production and investment strategies accordingly. - Highlights: •Impact of shale gas revolution on Henry Hub and NBP price movement regime is analysed. •Impact of revolution on relationship between oil and regional gas price is identified. •Revolution changes Henry Hub movement regime, having minor impact on NBP regime. •Clear seasonal fluctuation of Henry Hub prices has disappeared since the revolution. •Henry Hub has decoupled from WTI, while NBP and Brent exhibit long-term equilibrium.

Pollen-based biome reconstructions for Latin America at 0, 6000 and 18 000 radiocarbon years ago

Science.gov (United States)

Marchant, R.; Cleef, A.; Harrison, S.P.; Hooghiemstra, H.; Markgraf, Vera; Van Boxel, J.; Ager, T.; Almeida, L.; Anderson, R.; Baied, C.; Behling, H.; Berrio, J.C.; Burbridge, R.; Bjorck, S.; Byrne, R.; Bush, M.; Duivenvoorden, J.; Flenley, J.; De Oliveira, P.; Van Gee, B.; Graf, K.; Gosling, W.D.; Harbele, S.; Van Der Hammen, T.; Hansen, B.; Horn, S.; Kuhry, P.; Ledru, M.-P.; Mayle, F.; Leyden, B.; Lozano-Garcia, S.; Melief, A.M.; Moreno, P.; Moar, N.T.; Prieto, A.; Van Reenen, G.; Salgado-Labouriau, M.; Schabitz, F.; Schreve-Brinkman, E. J.; Wille, M.

2009-01-01

The biomisation method is used to reconstruct Latin American vegetation at 6000??500 and 18 000??1000 radiocarbon years before present ( 14C yr BP) from pollen data. Tests using modern pollen data from 381 samples derived from 287 locations broadly reproduce potential natural vegetation. The strong temperature gradient associated with the Andes is recorded by a transition from high altitude cool grass/shrubland and cool mixed forest to mid-altitude cool temperate rain forest, to tropical dry, seasonal and rain forest at low altitudes. Reconstructed biomes from a number of sites do not match the potential vegetation due to local factors such as human impact, methodological artefacts and mechanisms of pollen representivity of the parent vegetation. At 6000??500 14C yr BP 255 samples are analysed from 127 sites. Differences between the modern and the 6000??500 14C yr BP reconstruction are comparatively small; change relative to the modern reconstruction are mainly to biomes characteristic of drier climate in the north of the region with a slight more mesic shift in the south. Cool temperate rain forest remains dominant in western South America. In northwestern South America a number of sites record transitions from tropical seasonal forest to tropical dry forest and tropical rain forest to tropical seasonal forest. Sites in Central America show a change in biome assignment, but to more mesic vegetation, indicative of greater plant available moisture, e.g. on the Yucat??n peninsula sites record warm evergreen forest, replacing tropical dry forest and warm mixed forest presently recorded. At 18 000??1000 14C yr BP 61 samples from 34 sites record vegetation reflecting a generally cool and dry environment. Cool grass/shrubland is prevalent in southeast Brazil whereas Amazonian sites record tropical dry forest, warm temperate rain forest and tropical seasonal forest. Southernmost South America is dominated by cool grass/shrubland, a single site retains cool temperate rain

Biogeochemical cycling in terrestrial ecosystems of the Caatinga Biome.

Science.gov (United States)

Menezes, R S C; Sampaio, E V S B; Giongo, V; Pérez-Marin, A M

2012-08-01

The biogeochemical cycles of C, N, P and water, the impacts of land use in the stocks and flows of these elements and how they can affect the structure and functioning of Caatinga were reviewed. About half of this biome is still covered by native secondary vegetation. Soils are deficient in nutrients, especially N and P. Average concentrations of total soil P and C in the top layer (0-20 cm) are 196 mg kg(-1) and 9.3 g kg(-1), corresponding to C stocks around 23 Mg ha(-1). Aboveground biomass of native vegetation varies from 30 to 50 Mg ha(-1), and average root biomass from 3 to 12 Mg ha(-1). Average annual productivities and biomass accumulation in different land use systems vary from 1 to 7 Mg ha(-1) year(-1). Biological atmospheric N2 fixation is estimated to vary from 3 to 11 kg N ha(-1) year-1 and 21 to 26 kg N ha(-1) year(-1) in mature and secondary Caatinga, respectively. The main processes responsible for nutrient and water losses are fire, soil erosion, runoff and harvest of crops and animal products. Projected climate changes in the future point to higher temperatures and rainfall decreases. In face of the high intrinsic variability, actions to increase sustainability should improve resilience and stability of the ecosystems. Land use systems based on perennial species, as opposed to annual species, may be more stable and resilient, thus more adequate to face future potential increases in climate variability. Long-term studies to investigate the potential of the native biodiversity or adapted exotic species to design sustainable land use systems should be encouraged.

A new species of Andocaeculus (Acari, Caeculidae) from the Pampa biome, southern Brazil

OpenAIRE

Ana Paula Ott; Ricardo Ott

2014-01-01

A new caeculid species Andocaeculus caioi sp. nov. is described from Pampa biome in south Brazil. The species of this family are usually large and strong sclerotized mites with robust and spinulose legs I and II. Until now records of species for South America were known only from Chile and Argentina.

The freezer defrosting: global warming and litter decomposition rates in cold biomes. Essay review.

NARCIS (Netherlands)

Aerts, R.

2006-01-01

1 Decomposition of plant litter, a key component of the global carbon budget, is hierarchically controlled by the triad: climate > litter quality > soil organisms. Given the sensitivity of decomposition to temperature, especially in cold biomes, it has been hypothesized that global warming will lead

Candidatus Rickettsia andeanae, a spotted fever group agent infecting Amblyomma parvum ticks in two Brazilian biomes

Directory of Open Access Journals (Sweden)

Fernanda Aparecida Nieri-Bastos

2014-04-01

Full Text Available Adult ticks of the species Amblyomma parvum were collected from the vegetation in the Pantanal biome (state of Mato Grosso do Sul and from horses in the Cerrado biome (state of Piauí in Brazil. The ticks were individually tested for rickettsial infection via polymerase chain reaction (PCR targeting three rickettsial genes, gltA, ompA and ompB. Overall, 63.5% (40/63 and 66.7% (2/3 of A. parvum ticks from Pantanal and Cerrado, respectively, contained rickettsial DNA, which were all confirmed by DNA sequencing to be 100% identical to the corresponding fragments of the gltA, ompA and ompB genes of Candidatus Rickettsia andeanae. This report is the first to describe Ca. R. andeanae in Brazil.

Software quality assurance and software safety in the Biomed Control System

International Nuclear Information System (INIS)

Singh, R.P.; Chu, W.T.; Ludewigt, B.A.; Marks, K.M.; Nyman, M.A.; Renner, T.R.; Stradtner, R.

1989-01-01

The Biomed Control System is a hardware/software system used for the delivery, measurement and monitoring of heavy-ion beams in the patient treatment and biology experiment rooms in the Bevalac at the Lawrence Berkeley Laboratory (LBL). This paper describes some aspects of this system including historical background philosophy, configuration management, hardware features that facilitate software testing, software testing procedures, the release of new software quality assurance, safety and operator monitoring. 3 refs

Effects of feminine hygiene products on the vaginal mucosal biome

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Raina N. Fichorova

2013-02-01

Full Text Available Background: Over-the-counter (OTC feminine hygiene products come with little warning about possible side effects. This study evaluates in-vitro their effects on Lactobacillus crispatus, which is dominant in the normal vaginal microbiota and helps maintain a healthy mucosal barrier essential for normal reproductive function and prevention of sexually transmitted infections and gynecologic cancer. Methods: A feminine moisturizer (Vagisil, personal lubricant, and douche were purchased OTC. A topical spermicide (nonoxynol-9 known to alter the vaginal immune barrier was used as a control. L. crispatus was incubated with each product for 2 and 24h and then seeded on agar for colony forming units (CFU. Human vaginal epithelial cells were exposed to products in the presence or absence of L. crispatus for 24h, followed by epithelium-associated CFU enumeration. Interleukin-8 was immunoassayed and ANOVA was used for statistical evaluation. Results: Nonoxynol-9 and Vagisil suppressed Lactobacillus growth at 2h and killed all bacteria at 24h. The lubricant decreased bacterial growth insignificantly at 2h but killed all at 24h. The douche did not have a significant effect. At full strength, all products suppressed epithelial viability and all, except the douche, suppressed epithelial-associated CFU. When applied at non-toxic dose in the absence of bacteria, the douche and moisturizer induced an increase of IL-8, suggesting a potential to initiate inflammatory reaction. In the presence of L. crispatus, the proinflammatory effects of the douche and moisturizer were countered, and IL-8 production was inhibited in the presence of the other products. Conclusion: Some OTC vaginal products may be harmful to L. crispatus and alter the vaginal immune environment. Illustrated through these results, L. crispatus is essential in the preservation of the function of vaginal epithelial cells in the presence of some feminine hygiene products. More research should be invested

Beyond the climate envelope: using trait filtering models to predict biome boundaries from plant physiology.

Science.gov (United States)

Fisher, R.; Hoffmann, W. A.; Muszala, S.

2014-12-01

The introduction of second-generation dynamic vegetation models - which simulate the distribution of light resources between plant types along the vertical canopy profile, and therefore facilitate the representation of plant competition explicitly - is a large increase in the complexity and fidelity with which the terrestrial biosphere is abstracted into Earth System Models. In this new class of model, biome boundaries are predicted as the emergent properties of plant physiology, and are therefore sensitive to the high-dimensional parameterizations of plant functional traits. These new approaches offer the facility to quantitatively test ecophysiological hypotheses of plant distribution at large scales, a field which remains surprisingly under-developed. Here we describe experiments conducted with the Community Land Model Ecosystem Demography component, CLM(ED), in which we reduce the complexity of the problem by testing how individual plant functional trait changes to control the location of biome boundaries between functional types. Specifically, we investigate which physiological trade-offs determine the boundary between frequently burned savanna and forest biomes, and attempt to distinguish how each strategic life-history trade-off (carbon storage, bark investment, re-sprouting strategy) contributes towards the maintenance of sharp geographical gradients between fire adapted and typically inflammable closed canopy ecosystems. This study forms part of the planning for a model-inspired fire manipulation experiment at the cerrado-forest boundary in South-Eastern Brazil, and the results will be used to guide future data-collection and analysis strategies.

Biogeochemical modelling vs. tree-ring data - comparison of forest ecosystem productivity estimates

Science.gov (United States)

Zorana Ostrogović Sever, Maša; Barcza, Zoltán; Hidy, Dóra; Paladinić, Elvis; Kern, Anikó; Marjanović, Hrvoje

2017-04-01

Forest ecosystems are sensitive to environmental changes as well as human-induce disturbances, therefore process-based models with integrated management modules represent valuable tool for estimating and forecasting forest ecosystem productivity under changing conditions. Biogeochemical model Biome-BGC simulates carbon, nitrogen and water fluxes, and it is widely used for different terrestrial ecosystems. It was modified and parameterised by many researchers in the past to meet the specific local conditions. In this research, we used recently published improved version of the model Biome-BGCMuSo (BBGCMuSo), with multilayer soil module and integrated management module. The aim of our research is to validate modelling results of forest ecosystem productivity (NPP) from BBGCMuSo model with observed productivity estimated from an extensive dataset of tree-rings. The research was conducted in two distinct forest complexes of managed Pedunculate oak in SE Europe (Croatia), namely Pokupsko basin and Spačva basin. First, we parameterized BBGCMuSo model at a local level using eddy-covariance (EC) data from Jastrebarsko EC site. Parameterized model was used for the assessment of productivity on a larger scale. Results of NPP assessment with BBGCMuSo are compared with NPP estimated from tree ring data taken from trees on over 100 plots in both forest complexes. Keywords: Biome-BGCMuSo, forest productivity, model parameterization, NPP, Pedunculate oak

Are There Consistent Grazing Indicators in Drylands? Testing Plant Functional Types of Various Complexity in South Africa’s Grassland and Savanna Biomes

Science.gov (United States)

Linstädter, Anja; Schellberg, Jürgen; Brüser, Katharina; Moreno García, Cristian A.; Oomen, Roelof J.; du Preez, Chris C.; Ruppert, Jan C.; Ewert, Frank

2014-01-01

Despite our growing knowledge on plants’ functional responses to grazing, there is no consensus if an optimum level of functional aggregation exists for detecting grazing effects in drylands. With a comparative approach we searched for plant functional types (PFTs) with a consistent response to grazing across two areas differing in climatic aridity, situated in South Africa’s grassland and savanna biomes. We aggregated herbaceous species into PFTs, using hierarchical combinations of traits (from single- to three-trait PFTs). Traits relate to life history, growth form and leaf width. We first confirmed that soil and grazing gradients were largely independent from each other, and then searched in each biome for PFTs with a sensitive response to grazing, avoiding confounding with soil conditions. We found no response consistency, but biome-specific optimum aggregation levels. Three-trait PFTs (e.g. broad-leaved perennial grasses) and two-trait PFTs (e.g. perennial grasses) performed best as indicators of grazing effects in the semi-arid grassland and in the arid savanna biome, respectively. Some PFTs increased with grazing pressure in the grassland, but decreased in the savanna. We applied biome-specific grazing indicators to evaluate if differences in grazing management related to land tenure (communal versus freehold) had effects on vegetation. Tenure effects were small, which we mainly attributed to large variability in grazing pressure across farms. We conclude that the striking lack of generalizable PFT responses to grazing is due to a convergence of aridity and grazing effects, and unlikely to be overcome by more refined classification approaches. Hence, PFTs with an opposite response to grazing in the two biomes rather have a unimodal response along a gradient of additive forces of aridity and grazing. The study advocates for hierarchical trait combinations to identify localized indicator sets for grazing effects. Its methodological approach may also be

Water balance in paired watersheds with eucalyptus and degraded grassland in Pampa biome

Science.gov (United States)

Rangelands of the Pampa biome, which cover regions of Argentina, Uruguay and Brazil (176,496 km2 – 2.07% of Brazilian territory and 63% of Rio Grande do Sul State territory, southern region of Brazil) in South America (total area of 750,000 km2), are being substituted by crops and commercial eucalyp...

A reconstruction of Colombian biomes derived from modern pollen data along an altitude gradient

NARCIS (Netherlands)

Marchant, R.; Berrío, J.C.; Cleef, A.M.; Duivenvoorden, J.; Helmens, K.; Hooghiemstra, H.; Kuhry, P.; Melief, B.; Schreve-Brinkman, E.; Geel, van B.; Reenen, van G.; Hammen, van der T.

2001-01-01

Biomes are reconstructed in Colombia from modern (core-top) pollen data derived from 22 sites along an altitudinal gradient (2000–4100 m) that encompasses the tree line. The `biomization' methodology is described in a stepwise manner that details the reconstruction of vegetation along an altitudinal

A reconstruction of Colombian biomes derived from modern pollen data along an altitude gradient.

NARCIS (Netherlands)

Marchant, R.A.; Behling, H.; Berrio Mogollon, J.C.; Cleef, A.M.; Duivenvoorden, J.F.; van Geel, B.; van der Hammen, T.; Hooghiemstra, H.; Kuhry, P.; Melief, B.M.; van Reenen, G.B.A.; Wille, M.

2001-01-01

Biomes are reconstructed in Colombia from modern (core-top) pollen data derived from twenty-two sites along an altitudinal gradient (2000 to 4100 m) that encompasses the tree line. The 'biomization' methodology is described in a stepwise manner that details the reconstruction of vegetation along an

Contribution to the discussions on the origin of the cerrado biome: Brazilian savanna

Directory of Open Access Journals (Sweden)

MHO. Pinheiro

Full Text Available Theories that attempt to explain the origin of the cerrado biome are mostly based on the isolated action of three major factors: climate, fire and soil. Another factor that has been mentioned is that of human interference. We hypothesise that the evolutionary origin of this biome resulted from the complex interaction of climate, fire and soil, with climate being the triggering agent of this assumed interaction. Fire, as well as acid and dystrophic soils, would be factors involved in the selection of savanna species throughout climatic events, during the Tertiary and the Quaternary, e.g. Pliocene and Pleistocene. The genesis of the physiognomies that would give rise to cerrado sensu lato, rather than forest formations, could have occurred due to the strong pressure exerted by the reduction in water availability, and the selection of the species adapted to the new conditions imposed by the environment. The characteristics of cerrado sensu lato soil, originated from edaphic impoverishment caused by lixiviation and successive past fires, would remain, even after hydric availability increased following the Pleistocene glaciations.

Ética e pesquisa biomédica em sociedades indígenas no Brasil

Directory of Open Access Journals (Sweden)

Coimbra Jr. Carlos E. A.

1996-01-01

Full Text Available Este trabalho discute questões relativas à ética da investigação biomédica em populações indígenas brasileiras, em particular no que tange à obtenção de consentimento pós-informacional em pesquisas que envolvam a coleta de amostras biológicas. Enfatiza-se que nada há de específico na legislação atual com respeito à pesquisa biomédica nestas populações. A partir de uma perspectiva antropológica, os autores analisam algumas das dificuldades para a obtenção do consentimento "realmente" informado. Chama-se atenção para a importância das discussões sobre ética em pesquisa face a possibilidade de utilização comercial de amostras biológicas, como exemplificado pelo atual debate sobre patenteamento de material genético humano.

Global soil-climate-biome diagram: linking soil properties to climate and biota

Science.gov (United States)

Zhao, X.; Yang, Y.; Fang, J.

2017-12-01

As a critical component of the Earth system, soils interact strongly with both climate and biota and provide fundamental ecosystem services that maintain food, climate, and human security. Despite significant progress in digital soil mapping techniques and the rapidly growing quantity of observed soil information, quantitative linkages between soil properties, climate and biota at the global scale remain unclear. By compiling a large global soil database, we mapped seven major soil properties (bulk density [BD]; sand, silt and clay fractions; soil pH; soil organic carbon [SOC] density [SOCD]; and soil total nitrogen [STN] density [STND]) based on machine learning algorithms (regional random forest [RF] model) and quantitatively assessed the linkage between soil properties, climate and biota at the global scale. Our results demonstrated a global soil-climate-biome diagram, which improves our understanding of the strong correspondence between soils, climate and biomes. Soil pH decreased with greater mean annual precipitation (MAP) and lower mean annual temperature (MAT), and the critical MAP for the transition from alkaline to acidic soil pH decreased with decreasing MAT. Specifically, the critical MAP ranged from 400-500 mm when the MAT exceeded 10 °C but could decrease to 50-100 mm when the MAT was approximately 0 °C. SOCD and STND were tightly linked; both increased in accordance with lower MAT and higher MAP across terrestrial biomes. Global stocks of SOC and STN were estimated to be 788 ± 39.4 Pg (1015 g, or billion tons) and 63 ± 3.3 Pg in the upper 30-cm soil layer, respectively, but these values increased to 1654 ± 94.5 Pg and 133 ± 7.8 Pg in the upper 100-cm soil layer, respectively. These results reveal quantitative linkages between soil properties, climate and biota at the global scale, suggesting co-evolution of the soil, climate and biota under conditions of global environmental change.

Variation in decomposition rates in the fynbos biome, South Africa: the role of plant species and plant stoichiometry.

Science.gov (United States)

Bengtsson, Jan; Janion, Charlene; Chown, Steven L; Leinaas, Hans Petter

2011-01-01

Previous studies in the fynbos biome of the Western Cape, South Africa, have suggested that biological decomposition rates in the fynbos vegetation type, on poor soils, may be so low that fire is the main factor contributing to litter breakdown and nutrient release. However, the fynbos biome also comprises vegetation types on more fertile soils, such as the renosterveld. The latter is defined by the shrub Elytropappus rhinocerotis, while the shrub Galenia africana may become dominant in overgrazed areas. We examined decomposition of litter of these two species and the geophyte Watsonia borbonica in patches of renosterveld in an agricultural landscape. In particular, we sought to understand how plant species identity affects litter decomposition rates, especially through variation in litter stoichiometry. Decomposition (organic matter mass loss) varied greatly among the species, and was related to litter N and P content. G. africana, with highest nutrient content, lost 65% of its original mass after 180 days, while E. rhinocerotis had lost ca. 30%, and the very nutrient poor W. borbonica biome. Thus, biological decomposition has likely been underestimated and, along with small-scale variation in ecosystem processes, would repay further study.

Extensiones biométricas para bases de datos objeto- relacionales

OpenAIRE

Miranda, Ernesto; Ruíz, Silvia; Aguirre, Juan José; Herlein, Mauro; Etchart, Graciela; Alvez, Carlos E.

2017-01-01

La autenticación de personas basadas en rasgos biométricos se ha vuelto muy popular en los últimos años como consecuencia de la baja en los costos de los sensores requeridos, su inclusión en dispositivos de consumo masivo y el surgimiento de vulnerabilidades debido al uso de múltiples claves de acceso a diferentes sitios que requieren cierto nivel de seguridad como ser cuentas de correo, sitios de banca electrónica, sistemas corporativos, etc. De todos los rasgos utilizados en biometría, el i...

BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases.

Science.gov (United States)

Xu, Yanjun; Yang, Haixiu; Wu, Tan; Dong, Qun; Sun, Zeguo; Shang, Desi; Li, Feng; Xu, Yingqi; Su, Fei; Liu, Siyao; Zhang, Yunpeng; Li, Xia

2017-01-01

BioM2MetDisease is a manually curated database that aims to provide a comprehensive and experimentally supported resource of associations between metabolic diseases and various biomolecules. Recently, metabolic diseases such as diabetes have become one of the leading threats to people’s health. Metabolic disease associated with alterations of multiple types of biomolecules such as miRNAs and metabolites. An integrated and high-quality data source that collection of metabolic disease associated biomolecules is essential for exploring the underlying molecular mechanisms and discovering novel therapeutics. Here, we developed the BioM2MetDisease database, which currently documents 2681 entries of relationships between 1147 biomolecules (miRNAs, metabolites and small molecules/drugs) and 78 metabolic diseases across 14 species. Each entry includes biomolecule category, species, biomolecule name, disease name, dysregulation pattern, experimental technique, a brief description of metabolic disease-biomolecule relationships, the reference, additional annotation information etc. BioM2MetDisease provides a user-friendly interface to explore and retrieve all data conveniently. A submission page was also offered for researchers to submit new associations between biomolecules and metabolic diseases. BioM2MetDisease provides a comprehensive resource for studying biology molecules act in metabolic diseases, and it is helpful for understanding the molecular mechanisms and developing novel therapeutics for metabolic diseases. http://www.bio-bigdata.com/BioM2MetDisease/. © The Author(s) 2017. Published by Oxford University Press.

The Biome Project: Developing a Legitimate Parallel Curriculum for Physical Education and Life Sciences

Science.gov (United States)

Hastie, Peter Andrew

2013-01-01

The purpose of this article is to describe the outcomes of a parallel curriculum project between life sciences and physical education. Throughout a 6-week period, students in grades two through five became members of teams that represented different animal species and biomes, and concurrently participated in a season of gymnastics skills and…

Bladder function in 17β-estradiol-induced nonbacterial prostatitis model in Wistar rat.

Science.gov (United States)

Matsumoto, Seiji; Kawai, Yuko; Oka, Michiko; Oyama, Tatsuya; Hashizume, Kazumi; Wada, Naoki; Hori, Jun-ichi; Tamaki, Gaku; Kita, Masafumi; Iwata, Tatsuya; Kakizaki, Hidehiro

2013-06-01

To investigate bladder function in a model of nonbacterial prostatitis (NBP) induced in castrated rats by 17β-estradiol injection. Ten-month-old male Wistar rats were divided into two groups, sham and NBP (both N = 8). NBP was induced by castration followed by daily subcutaneous injection of 17β-estradiol for 30 days. On the 31st day after surgery, we investigated (1) voiding behavior, (2) bladder blood flow (BBF), (3) prostate and bladder weight, and proinflammatory cytokines (TNF-α and CXCL1) levels and (4) bladder contractile responses to electrical field stimulation (EFS), carbachol and KCl. (1) Voiding behavior (average micturition volume, total urine volume and number of micturitions) and (2) BBF were not significantly different between the sham and NBP groups. (3) NBP led to a significant decrease in prostatic weight and increase in proinflammatory cytokine levels in the prostate, but NBP did not cause a significant change in bladder weight or proinflammatory cytokine levels in the bladder. (4) Bladder contractile forces in response to EFS, carbachol and KCl were not significantly affected by NBP. In this rat model, NBP did not cause a significant change in the level of proinflammatory cytokines in the bladder and affect bladder function.

Evaluation of MODIS NPP and GPP products across multiple biomes.

Science.gov (United States)

David P. Turner; William D. Ritts; Warren B. Cohen; Stith T. Gower; Steve W. Running; Maosheng Zhao; Marcos H. Costa; Al A. Kirschbaum; Jay M. Ham; Scott R. Saleska; Douglas E. Ahl

2006-01-01

Estimates of daily gross primary production (GPP) and annual net primary production (NPP) at the 1 km spatial resolution are now produced operationally for the global terrestrial surface using imagery from the MODIS (Moderate Resolution Imaging Spectroradiometer) sensor. Ecosystem-level measurements of GPP at eddy covariance flux towers and plot-level measurements of...

BIOME: An Ecosystem Remote Sensor Based on Imaging Interferometry

Science.gov (United States)

Peterson, David L.; Hammer, Philip; Smith, William H.; Lawless, James G. (Technical Monitor)

1994-01-01

Until recent times, optical remote sensing of ecosystem properties from space has been limited to broad band multispectral scanners such as Landsat and AVHRR. While these sensor data can be used to derive important information about ecosystem parameters, they are very limited for measuring key biogeochemical cycling parameters such as the chemical content of plant canopies. Such parameters, for example the lignin and nitrogen contents, are potentially amenable to measurements by very high spectral resolution instruments using a spectroscopic approach. Airborne sensors based on grating imaging spectrometers gave the first promise of such potential but the recent decision not to deploy the space version has left the community without many alternatives. In the past few years, advancements in high performance deep well digital sensor arrays coupled with a patented design for a two-beam interferometer has produced an entirely new design for acquiring imaging spectroscopic data at the signal to noise levels necessary for quantitatively estimating chemical composition (1000:1 at 2 microns). This design has been assembled as a laboratory instrument and the principles demonstrated for acquiring remote scenes. An airborne instrument is in production and spaceborne sensors being proposed. The instrument is extremely promising because of its low cost, lower power requirements, very low weight, simplicity (no moving parts), and high performance. For these reasons, we have called it the first instrument optimized for ecosystem studies as part of a Biological Imaging and Observation Mission to Earth (BIOME).

Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa.

Science.gov (United States)

Corbelli, Julian Martin; Zurita, Gustavo Andres; Filloy, Julieta; Galvis, Juan Pablo; Vespa, Natalia Isabel; Bellocq, Isabel

2015-01-01

The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD), functional (FBD) and phylogenetic (PBD) facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools) and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants) from two contrasting biomes (subtropical forest and grassland) and land uses (tree plantations and cropfields) in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland), and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation.

Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa

Science.gov (United States)

Corbelli, Julian Martin; Zurita, Gustavo Andres; Filloy, Julieta; Galvis, Juan Pablo; Vespa, Natalia Isabel; Bellocq, Isabel

2015-01-01

The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD), functional (FBD) and phylogenetic (PBD) facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools) and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants) from two contrasting biomes (subtropical forest and grassland) and land uses (tree plantations and cropfields) in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland), and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation. PMID:25978319

Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa.

Directory of Open Access Journals (Sweden)

Julian Martin Corbelli

Full Text Available The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD, functional (FBD and phylogenetic (PBD facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants from two contrasting biomes (subtropical forest and grassland and land uses (tree plantations and cropfields in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland, and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation.

Modeling the Ecosystem Services Provided by Trees in Urban Ecosystems: Using Biome-BGC to Improve i-Tree Eco

Science.gov (United States)

Brown, Molly E.; McGroddy, Megan; Spence, Caitlin; Flake, Leah; Sarfraz, Amna; Nowak, David J.; Milesi, Cristina

2012-01-01

As the world becomes increasingly urban, the need to quantify the effect of trees in urban environments on energy usage, air pollution, local climate and nutrient run-off has increased. By identifying, quantifying and valuing the ecological activity that provides services in urban areas, stronger policies and improved quality of life for urban residents can be obtained. Here we focus on two radically different models that can be used to characterize urban forests. The i-Tree Eco model (formerly UFORE model) quantifies ecosystem services (e.g., air pollution removal, carbon storage) and values derived from urban trees based on field measurements of trees and local ancillary data sets. Biome-BGC (Biome BioGeoChemistry) is used to simulate the fluxes and storage of carbon, water, and nitrogen in natural environments. This paper compares i-Tree Eco's methods to those of Biome-BGC, which estimates the fluxes and storage of energy, carbon, water and nitrogen for vegetation and soil components of the ecosystem. We describe the two models and their differences in the way they calculate similar properties, with a focus on carbon and nitrogen. Finally, we discuss the implications of further integration of these two communities for land managers such as those in Maryland.

Assessment of water pollution in the Brazilian Pampa biome by means of stress biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii (Anura: Hylidae).

Science.gov (United States)

Santos, T G; Melo, R; Costa-Silva, D G; Nunes, Mem; Rodrigues, N R; Franco, J L

2015-01-01

The Brazilian Pampa biome is currently under constant threat due to increase of agriculture and improper management of urban effluents. Studies with a focus on the assessment of impacts caused by human activities in this biome are scarce. In the present study, we measured stress-related biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii, an endemic species to the Pampa biome, and tested its suitability as a bioindicator for the assessment of potential aquatic contamination in selected ponds (S1 and S2) nearby agricultural areas in comparison to a reference site. A significant decrease in acetylcholinesterase activity was observed in S2 when compared to S1 and reference. The levels of total-hydroperoxides were increased in S2 site. In parallel, increased activity of the antioxidant enzymes catalase, superoxide dismutase and glutathione S-transferase were observed in S2 when compared to S1 and reference. Further studies are necessary in order to correlate the changes observed here with different chemical stressors in water, as well as to elucidate mechanisms of toxicity induced by pesticides in amphibian species endemic to the Pampa biome. Nevertheless, our study validates Phyllomedusa iheringii as a valuable bioindicator in environmental studies.

Optimizing selective cutting strategies for maximum carbon stocks and yield of Moso bamboo forest using BIOME-BGC model.

Science.gov (United States)

Mao, Fangjie; Zhou, Guomo; Li, Pingheng; Du, Huaqiang; Xu, Xiaojun; Shi, Yongjun; Mo, Lufeng; Zhou, Yufeng; Tu, Guoqing

2017-04-15

The selective cutting method currently used in Moso bamboo forests has resulted in a reduction of stand productivity and carbon sequestration capacity. Given the time and labor expense involved in addressing this problem manually, simulation using an ecosystem model is the most suitable approach. The BIOME-BGC model was improved to suit managed Moso bamboo forests, which was adapted to include age structure, specific ecological processes and management measures of Moso bamboo forest. A field selective cutting experiment was done in nine plots with three cutting intensities (high-intensity, moderate-intensity and low-intensity) during 2010-2013, and biomass of these plots was measured for model validation. Then four selective cutting scenarios were simulated by the improved BIOME-BGC model to optimize the selective cutting timings, intervals, retained ages and intensities. The improved model matched the observed aboveground carbon density and yield of different plots, with a range of relative error from 9.83% to 15.74%. The results of different selective cutting scenarios suggested that the optimal selective cutting measure should be cutting 30% culms of age 6, 80% culms of age 7, and all culms thereafter (above age 8) in winter every other year. The vegetation carbon density and harvested carbon density of this selective cutting method can increase by 74.63% and 21.5%, respectively, compared with the current selective cutting measure. The optimized selective cutting measure developed in this study can significantly promote carbon density, yield, and carbon sink capacity in Moso bamboo forests. Copyright © 2017 Elsevier Ltd. All rights reserved.

Comparative patterns of plant invasions in the Mediterranean biome.

Science.gov (United States)

Arianoutsou, Margarita; Delipetrou, Pinelopi; Vilà, Montserrat; Dimitrakopoulos, Panayiotis G; Celesti-Grapow, Laura; Wardell-Johnson, Grant; Henderson, Lesley; Fuentes, Nicol; Ugarte-Mendes, Eduardo; Rundel, Philip W

2013-01-01

The objective of this work was to compare and contrast the patterns of alien plant invasions in the world's five mediterranean-climate regions (MCRs). We expected landscape age and disturbance history to have bearing on levels of invasion. We assembled a database on naturalized alien plant taxa occurring in natural and semi-natural terrestrial habitats of all five regions (specifically Spain, Italy, Greece and Cyprus from the Mediterranean Basin, California, central Chile, the Cape Region of South Africa and Southwestern - SW Australia). We used multivariate (hierarchical clustering and NMDS ordination) trait and habitat analysis to compare characteristics of regions, taxa and habitats across the mediterranean biome. Our database included 1627 naturalized species with an overall low taxonomic similarity among the five MCRs. Herbaceous perennials were the most frequent taxa, with SW Australia exhibiting both the highest numbers of naturalized species and the highest taxonomic similarity (homogenization) among habitats, and the Mediterranean Basin the lowest. Low stress and highly disturbed habitats had the highest frequency of invasion and homogenization in all regions, and high natural stress habitats the lowest, while taxonomic similarity was higher among different habitats in each region than among regions. Our analysis is the first to describe patterns of species characteristics and habitat vulnerability for a single biome. We have shown that a broad niche (i.e. more than one habitat) is typical of naturalized plant species, regardless of their geographical area of origin, leading to potential for high homogenization within each region. Habitats of the Mediterranean Basin are apparently the most resistant to plant invasion, possibly because their landscapes are generally of relatively recent origin, but with a more gradual exposure to human intervention over a longer period.

Autenticación mediante parámetros biométricos

OpenAIRE

Pastor Navarro, Ricard

2017-01-01

En les pàgines següents s’explicarà el procés seguit per la realització d’aquest treball de final de grau, en el que es pretén substituir, en un programa de gestió de contrasenyes, la contrasenya mestre per paràmetres biomètrics, concretament el reconeixement facial. Per a complir amb aquest objectiu s’utilitzaran alguns algoritmes de visió per computador extrets de les llibreries de OpenCV. El sistema final agafarà imatges de l’usuari i fent la comprovació del usuari decidint si ha de donar ...

Eastern deciduous forest biome progress report, September 1, 1975--August 31, 1976

International Nuclear Information System (INIS)

Burgess, R.L.; Tarr, N.E.

1978-09-01

The report concentrates on the six projects as well as results from synthesis activities at the Lake George, Lake Wingra, and Oak Ridge sites. The centralized analysis and modeling component and the Eastern Decidious Forest Biome Information Center progress during the past year are also addressed. The project on belowground dynamics of ecosystems is investigating the allocation of phytosynthetic products into fixed or labile storage pools. Root sampling, radioactive tracer techniques, and biochemical analyses are leading to an understanding of complete tree physioogy requisite for interpreting forest growth in different environments. The Role of Consumers project has begun to document the regulatory role of heterotrophs in an array of ecosystem niches. Decomposition of woody substrates, studies of the contribution of canopy and litter arthropods to material processing, and the flow and remineralization of phosphorus in lake systems are leading to a comprehensive understanding of the role of consumer organisms in ecosystem function. The Microdynamics of Detritus project continues its investigations of carbon and nitrogen dynamics in freshwater lakes. Examination of potential pathways of detritus processing is illustrating the parts that physical and biological processes play in the breakdown of organic materials

Preclinical pharmacokinetics, tissue distribution and plasma protein binding of sodium (±-5-bromo-2-(α-hydroxypentyl benzoate (BZP, an innovative potent anti-ischemic stroke agent

Directory of Open Access Journals (Sweden)

Xin Tian

2016-08-01

Full Text Available Sodium (±-5-bromo-2-(α-hydroxypentyl benzoate (BZP is a potential cardiovascular drug and exerts potent neuroprotective effect against transient and long-term ischemic stroke in rats. BZP could convert into 3-butyl-6-bromo-1(3H-isobenzofuranone (Br-NBP in vitro and in vivo. However, the pharmacokinetic profiles of BZP and Br-NBP still have not been evaluated. For the purpose of investigating the pharmacokinetic profiles, tissue distribution and plasma protein binding of BZP and Br-NBP, a rapid, sensitive and specific method based on liquid chromatography coupled to mass spectrometry (LC-MS/MS has been developed for determination of BZP and Br-NBP in biological samples. The results indicated that BZP and Br-NBP showed a short elimination half-life, and pharmacokinetic profile in rats (3, 6 and 12 mg/kg; i.v. and beagle dogs (1, 2 and 4 mg/kg; i.v.gtt were obtained after single dosing of BZP. After multiple dosing of BZP, there was no significant accumulation of BZP and Br-NBP in the plasma of rats and beagle dogs. Following i.v. single dose (6 mg/kg to rats, BZP and Br-NBP were distributed rapidly into all tissues examined, with the highest concentrations of BZP and Br-NBP in lung and kidney, respectively. The brain distribution of Br-NBP in middle cerebral artery occlusion (MCAO rats was more than in normal rats (P<0.05. The plasma protein binding degree of BZP at three concentrations (8000, 20000 and 80000 ng/mL from rat, beagle dog and human plasma were 98.1~98.7%, 88.9~92.7% and 74.8%~83.7% respectively. In conclusion, both BZP and Br-NBP showed short half-life, good dose-linear pharmacokinetic profile, wide tissue distribution and different degree protein binding to various species plasma. This was the first preclinical pharmacokinetic investigation of BZP and Br-NBP in both rats and beagle dogs, which provided vital guidance for further preclinical research and the subsequent clinical trials.

Serotype distribution in non-bacteremic pneumococcal pneumonia

DEFF Research Database (Denmark)

Benfield, Thomas Lars Vibe; Skovgaard, Marlene; Schønheyder, Henrik Carl

2013-01-01

There is limited knowledge of serotypes that cause non-bacteremic pneumococcal pneumonia (NBP). Here we report serotypes, their associated disease potential and coverage of pneumococcal conjugate vaccines (PCV) in adults with NBP and compare these to bacteremic pneumonia (BP).......There is limited knowledge of serotypes that cause non-bacteremic pneumococcal pneumonia (NBP). Here we report serotypes, their associated disease potential and coverage of pneumococcal conjugate vaccines (PCV) in adults with NBP and compare these to bacteremic pneumonia (BP)....

Morphofunctional diversity of equine of varied genetic compositions raised in the Pantanal biome of Brazil.

Science.gov (United States)

de Rezende, Marcos Paulo Gonçalves; de Souza, Julio Cesar; Carneiro, Paulo Luiz Souza; Bozzi, Riccardo; Jardim, Rodrigo Jose Delgado; Malhado, Carlos Henrique Mendes

2018-06-01

Evaluating phenotypic diversity makes it possible to identify discrepancies in aptitudes among animals of different genetic bases, which is an indicator of adaptive or selective differences between populations. The objective of this work was to evaluate the morphofunctional diversity of 452 male and female adult equines (Arabian, Quarter Mile, Pantaneiro, and Criollo breeds, and undefined crossbreeds of horses and mules) raised in the Pantanal biome (Brazil). Linear measurements were performed to estimate conformation indexes. Initially, a discriminant analysis was performed, regardless of the animal's size, followed by factor analysis. The factors were characterized and used as new variables. The diversity among equines and their relationship with the factors were evaluated using multivariate analysis. The factors were classified according to their decreasing importance: balance, rusticity, and robustness for the measurement factors; and load, ability, conformation, and equilibrium for the index factors. The genetic groups of equines have well-defined morphofunctional characteristics. The main differences are based on the rusticity and ability typologies in relation to those based on performance. Equines introduced to the Pantanal biome presented a more robust and compact body with good conformation. As a result, these horses may have superior athletic performance during equestrian activities when compared to the Pantaneiro local breed. However, this biotype may represent less rusticity (less adaptive capacity). Therefore, the regional breed can be equal or better in equestrian activities than breeds introduced to the Pantanal biome. Thus, breeders may cross horses from local breeds as an alternative to those introduced. Undefined crossbred male equines presented a different profile from the Pantaneiro breed, which may indicate little use of crossbreeds in breeding.

Clonality analysis of lymphoid proliferations using the BIOMED-2 clonality assays: a single institution experience

Science.gov (United States)

Kokovic, Ira; Novakovic, Barbara Jezersek; Cerkovnik, Petra; Novakovic, Srdjan

2014-01-01

Background Clonality determination in patients with lymphoproliferative disorders can improve the final diagnosis. The aim of our study was to evaluate the applicative value of standardized BIOMED-2 gene clonality assay protocols for the analysis of clonality of lymphocytes in a group of different lymphoid proliferations. Materials and methods. With this purpose, 121 specimens from 91 patients with suspected lymphoproliferations submitted for routine diagnostics from January to December 2011 were retrospectively analyzed. According to the final diagnosis, our series comprised 32 cases of B-cell lymphomas, 38 cases of non-Hodgkin’s T-cell lymphomas and 51 cases of reactive lymphoid proliferations. Clonality testing was performed using the BIOMED-2 clonality assays. Results The determined sensitivity of the TCR assay was 91.9%, while the sensitivity of the IGH assay was 74.2%. The determined specificity of the IGH assay was 73.3% in the group of lymphomas and 87.2% in the group of reactive lesions. The determined specificity of the TCR assay was 62.5% in the group of lymphomas and 54.3% in the group of reactive lesions. Conclusions In the present study, we confirmed the utility of standardized BIOMED-2 clonality assays for the detection of clonality in a routine diagnostical setting of non-Hodgkin’s lymphomas. Reactions for the detection of the complete IGH rearrangements and reactions for the detection of the TCR rearrangements are a good choice for clonality testing of a wide range of lymphoid proliferations and specimen types while the reactions for the detection of incomplete IGH rearrangements have not shown any additional diagnostic value. PMID:24991205

Birth of a biome: insights into the assembly and maintenance of the Australian arid zone biota.

Science.gov (United States)

Byrne, M; Yeates, D K; Joseph, L; Kearney, M; Bowler, J; Williams, M A J; Cooper, S; Donnellan, S C; Keogh, J S; Leys, R; Melville, J; Murphy, D J; Porch, N; Wyrwoll, K-H

2008-10-01

The integration of phylogenetics, phylogeography and palaeoenvironmental studies is providing major insights into the historical forces that have shaped the Earth's biomes. Yet our present view is biased towards arctic and temperate/tropical forest regions, with very little focus on the extensive arid regions of the planet. The Australian arid zone is one of the largest desert landform systems in the world, with a unique, diverse and relatively well-studied biota. With foci on palaeoenvironmental and molecular data, we here review what is known about the assembly and maintenance of this biome in the context of its physical history, and in comparison with other mesic biomes. Aridification of Australia began in the Mid-Miocene, around 15 million years, but fully arid landforms in central Australia appeared much later, around 1-4 million years. Dated molecular phylogenies of diverse taxa show the deepest divergences of arid-adapted taxa from the Mid-Miocene, consistent with the onset of desiccation. There is evidence of arid-adapted taxa evolving from mesic-adapted ancestors, and also of speciation within the arid zone. There is no evidence for an increase in speciation rate during the Pleistocene, and most arid-zone species lineages date to the Pliocene or earlier. The last 0.8 million years have seen major fluctuations of the arid zone, with large areas covered by mobile sand dunes during glacial maxima. Some large, vagile taxa show patterns of recent expansion and migration throughout the arid zone, in parallel with the ice sheet-imposed range shifts in Northern Hemisphere taxa. Yet other taxa show high lineage diversity and strong phylogeographical structure, indicating persistence in multiple localised refugia over several glacial maxima. Similar to the Northern Hemisphere, Pleistocene range shifts have produced suture zones, creating the opportunity for diversification and speciation through hybridisation, polyploidy and parthenogenesis. This review highlights

Reply: “Use of BIOME-BGC to simulate Mediterranean forest carbon stocks”

OpenAIRE

Maselli F; Salvati R; Barbati A; Chirici G; Chiesi M

2011-01-01

The current note responds to the critical contribution of Dr. Eastaugh on Chiesi et al. (Chiesi et al. 2011). That paper did not aim at applying BIOME-BGC to simulate stand growth, which requires a thorough modification of the model functions. In contrast, only a parameter setting was changed in order to adjust the predicted carbon storages during the simulation of quasi-equilibrium conditions. The adjustment was calibrated on volume statistics derived from the Tuscany forest inventory and is...

Genetic diversity of bats coronaviruses in the Atlantic Forest hotspot biome, Brazil.

Science.gov (United States)

Góes, Luiz Gustavo Bentim; Campos, Angélica Cristine de Almeida; Carvalho, Cristiano de; Ambar, Guilherme; Queiroz, Luzia Helena; Cruz-Neto, Ariovaldo Pereira; Munir, Muhammad; Durigon, Edison Luiz

2016-10-01

Bats are notorious reservoirs of genetically-diverse and high-profile pathogens, and are playing crucial roles in the emergence and re-emergence of viruses, both in human and in animals. In this report, we identified and characterized previously unknown and diverse genetic clusters of bat coronaviruses in the Atlantic Forest Biome, Brazil. These results highlight the virus richness of bats and their possible roles in the public health. Copyright © 2016 Elsevier B.V. All rights reserved.

Synthesis and Performance of a Biomimetic Indicator for Alkylating Agents.

Science.gov (United States)

Provencher, Philip A; Love, Jennifer A

2015-10-02

4-(4-Nitrobenzyl)pyridine (NBP) is a colorimetric indicator compound for many types of carcinogenic alkylating agents. Because of the similar reactivity of NBP and guanine in DNA, NBP serves as a DNA model. NBP assays are used in the toxicological screening of pharmaceutical compounds, detection of chemical warfare agents, environmental hygiene technology, preliminary toxicology tests, mutagenicity of medicinal compounds, and other chemical analyses. Nevertheless, the use of NBP as a DNA model suffers from the compound's low water solubility, its lack of reactive oxygen sites, and dissimilar steric encumbrance compared to DNA. We report herein the design and synthesis of NBP derivatives that address some of these issues. These derivatives have been tested in solution and found to be superior in the colorimetric assay of the alkylating anticancer drug cyclophosphamide. The derivatives have also been integrated into a polymeric silica material which changes color upon the exposure to dangerous alkylating agents, such as iodomethane vapor, without the need for an exogenous base. This material modernizes the NBP assay from a time-consuming laboratory analysis to a real-time solid state sensor, which requires neither solvent nor additional reagents and can detect both gas- and solution-phase alkylating agents.

Mechanistic study of oxidation of d-arabinose by N-bromophthalimide in presence of micro-amount of chloro-complex of Ru(III as a homogeneous catalyst

Directory of Open Access Journals (Sweden)

Neerja Sachdev

2017-11-01

Full Text Available The kinetics and mechanism of Ru(III-catalyzed oxidation of d-arabinose (d-Ara by N-bromophthalimide (NBP in a acidic medium were investigated using titrimetric method for the redox reaction in the temperature range of 303–323 K. The reaction was first order with respect to [NBP] and [Ru(III]. In both cases, the reaction followed identical kinetics with positive fractional order for [d-Ara] and [H+]. Negative effect with increase in [Cl−], [CH3COOH] and [acetonitrile] could also be observed. Erythronic acid and formic acid were identified as main oxidation products of the reaction. Reduced product of the oxidant i.e. phthalimide did not show significant effect on oxidation rate. Various activation parameters have also been evaluated. Finally a plausible mechanism has been proposed from the kinetic results, reaction stoichiometry and product analysis.

Global negative vegetation feedback to climate warming responses of leaf litter decomposition rates in cold biomes.

NARCIS (Netherlands)

Cornelissen, J.H.C.; van Bodegom, P.M.; Aerts, R.; Gallaghan, T.V.; van Logtestijn, R.S.P; Alatalo, J.; Chapin, F.S. III; Gerdol, R.; Gudmundsson, J.; Gwynn-Jones, D.; Hartley, A.E.; Hik, D.S.; Hofgaard, A.; Jonsdottir, I.S.; Karlsson, S.; Klein, J.A.; Laundre, J.; Magnusson, B.; Michelsel, A.; Molau, U.; Onipchenko, V.G.; Quested, H.M.; Sandvik, S.M.; Schmidt, I.K.; Shaver, G.R.; Solhleim, B.; Soudzilovskaia, N.A.; Stenstrom, A.; Tolvanen, A.; Totland, O.; Wada, N.; Welker, J.M.; Zhao, X.; Team, M.O.L.

2007-01-01

Whether climate change will turn cold biomes from large long-term carbon sinks into sources is hotly debated because of the great potential for ecosystem-mediated feedbacks to global climate. Critical are the direction, magnitude and generality of climate responses of plant litter decomposition.

Trans-biome diversity in Australian grass-specialist lizards (Diplodactylidae: Strophurus).

Science.gov (United States)

Laver, Rebecca J; Nielsen, Stuart V; Rosauer, Dan F; Oliver, Paul M

2017-10-01

Comparisons of biodiversity patterns within lineages that occur across major climate gradients and biomes, can provide insights into the relative roles that lineage history, landscape and climatic variation, and environmental change have played in shaping regional biotas. In Australia, while there has been extensive research into the origins and patterns of diversity in the Australian Arid Zone (AAZ), how diversity is distributed across this biome and the Australian Monsoonal Tropics (AMT) to the north, has been less studied. We compared the timing and patterns of diversification across this broad aridity gradient in a clade of lizards (Strophurus: phasmid geckos) that only occur in association with a unique Australian radiation of sclerophyllous grasses (Triodia: spinifex). Our results indicate that overall genetic diversity is much higher, older and more finely geographically structured within the AMT, including distantly related clades endemic to the sandstone escarpments of the Kimberley and Arnhem Plateau. Niche modelling analyses also suggest that the distribution of taxa in the AMT is more strongly correlated with variation in topographic relief than in the AAZ. The two broad patterns that we recovered - (i) lineage endemism increases as latitude decreases, and (ii) endemism is tightly correlated to rocky regions - parallel and corroborate other recent studies of habitat generalists and specialised saxicoline lineages occurring across these same regions. Early Miocene diversification estimates also suggest that, soon after Triodia grasses colonised Australia and began to diversify in the Miocene, phasmid geckos with Gondwanan ancestry shifted into these grasses, and have subsequently remained closely associated with this unique vegetation type. Copyright © 2017 Elsevier Inc. All rights reserved.

Indoor Positioning Using Nonparametric Belief Propagation Based on Spanning Trees

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Savic Vladimir

2010-01-01

Full Text Available Nonparametric belief propagation (NBP is one of the best-known methods for cooperative localization in sensor networks. It is capable of providing information about location estimation with appropriate uncertainty and to accommodate non-Gaussian distance measurement errors. However, the accuracy of NBP is questionable in loopy networks. Therefore, in this paper, we propose a novel approach, NBP based on spanning trees (NBP-ST created by breadth first search (BFS method. In addition, we propose a reliable indoor model based on obtained measurements in our lab. According to our simulation results, NBP-ST performs better than NBP in terms of accuracy and communication cost in the networks with high connectivity (i.e., highly loopy networks. Furthermore, the computational and communication costs are nearly constant with respect to the transmission radius. However, the drawbacks of proposed method are a little bit higher computational cost and poor performance in low-connected networks.

The deforestation story: testing for anthropogenic origins of Africa's flammable grassy biomes.

Science.gov (United States)

Bond, William; Zaloumis, Nicholas P

2016-06-05

Africa has the most extensive C4 grassy biomes of any continent. They are highly flammable accounting for greater than 70% of the world's burnt area. Much of Africa's savannas and grasslands occur in climates warm enough and wet enough to support closed forests. The combination of open grassy systems and the frequent fires they support have long been interpreted as anthropogenic artefacts caused by humans igniting frequent fires. True grasslands, it was believed, would be restricted to climates too dry or too cold to support closed woody vegetation. The idea that higher-rainfall savannas are anthropogenic and that fires are of human origin has led to initiatives to 'reforest' Africa's open grassy systems paid for by carbon credits under the assumption that the net effect of converting these system to forests would sequester carbon, reduce greenhouse gases and mitigate global warming. This paper reviews evidence for the antiquity of African grassy ecosystems and for the fires that they sustain. Africa's grassy biomes and the fires that maintain them are ancient and there is no support for the idea that humans caused large-scale deforestation. Indicators of old-growth grasslands are described. These can help distinguish secondary grasslands suitable for reforestation from ancient grasslands that should not be afforested.This article is part of the themed issue 'The interaction of fire and mankind'. © 2016 The Author(s).

Assessment of water pollution in the Brazilian Pampa biome by means of stress biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii (Anura: Hylidae

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TG Santos

2015-06-01

Full Text Available The Brazilian Pampa biome is currently under constant threat due to increase of agriculture and improper management of urban effluents. Studies with a focus on the assessment of impacts caused by human activities in this biome are scarce. In the present study, we measured stress-related biomarkers in tadpoles of the leaf frog Phyllomedusa iheringii, an endemic species to the Pampa biome, and tested its suitability as a bioindicator for the assessment of potential aquatic contamination in selected ponds (S1 and S2 nearby agricultural areas in comparison to a reference site. A significant decrease in acetylcholinesterase activity was observed in S2 when compared to S1 and reference. The levels of total-hydroperoxides were increased in S2 site. In parallel, increased activity of the antioxidant enzymes catalase, superoxide dismutase and glutathione S-transferase were observed in S2 when compared to S1 and reference. Further studies are necessary in order to correlate the changes observed here with different chemical stressors in water, as well as to elucidate mechanisms of toxicity induced by pesticides in amphibian species endemic to the Pampa biome. Nevertheless, our study validates Phyllomedusa iheringii as a valuable bioindicator in environmental studies.

La filatelia biomédica Biomedicine philately

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Emilio J.A. Roldán

2011-02-01

Full Text Available La temática biomédica es un capítulo extendido de la filatelia o coleccionismo de sellos postales. Inaugura la temática la imagen de la diosa Hygeia, en un sello de la isla Nevis de 1861. Los primeros médicos retratados en una estampilla son tres constitucionalistas americanos, en un ejemplar de 1869, pero recién en 1937 aparecen médicos holandeses en reconocimiento específico de sus aportes a la salud. En la Argentina la primera estampilla que oficialmente se ocupa del tema es de 1944, en ayuda de las víctimas del terremoto de San Juan. Florentino Ameghino es el primer científico incluido en 1954, y en 1967 se edita un sello conmemorativo de la Dra. Cecilia Grierson. La filatelia argentina luego reconoce varios de nuestros científicos y médicos, congresos, universidades, campañas sanitarias, temas de odontología, farmacia, enfermería y otros, generando un amplio material filatélico en reconocimiento del valor social que la ciencia biomédica argentina ha logrado en el contexto propio e internacional. Posiblemente sea un científico, el Dr. Bernardo Houssay, uno de los argentinos más veces editado en distintos sellos postales de la filatelia mundial.Biomedicine is a vast field in philately or stamp collecting. It opens the topic the image of the goddess Hygeia, issued in a stamp from Nevis Island dated 1861. The first physicians to appear printed in stamps, in 1869, were three American constitutionalists, but only in 1937 there appear Dutch physicians as an acknowledgement of their contribution to public health. In Argentina the first stamp officially related to the topic was issued in 1944, to raise funds for the victims of the San Juan earthquake. Florentino Ameghino was the first scientist included in 1954, and in 1967 a stamp was issued in honour of Dr. Cecilia Grierson. Afterwards, Argentinean philately has recognized several of our scientists and physicians, congresses, universities, health campaigns, dentistry topics

Montane plant environments in the Fynbos Biome

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B. M. Campbell

1983-12-01

Full Text Available Environmental data collected at 507 plots on 22 transects, and soil analytical data from 81 of these plots, have been used to describe the plant environments of the mountains in the Fynbos Biome. Two major regional gradients are recognized: a west-east gradient and a coast-interior gradient. Of particular consequence for fynbos-environment studies is the increase in the proportion of fine soil particles from west to east. At least some aspects of soil fertility also increase towards the east. The edaphic changes are paralleled by climatic changes: chiefly a decrease in the severity of summer drought towards the east. On the coast-interior gradient a major non-climatic variable in the gradient is rock cover. High rock cover is a feature of the interior ranges. Soils with organic horizons or with E horizons are a feature on the coastal mountains, but are generally lacking on the interior mountains. The other environmental gradients recognized occur on individual transects and all include edaphic variables. The rockiness-soil depth gradient, on which an increase in rockiness is associated with a decrease in soil depth and usually a decrease in clay content, tends to occur in three situations. Firstly, it is associated with local topographic variation; the shallow, rocky soils being a feature of the steeper slopes. Secondly, it is associated with the aspect gradient; the hot, dry northern aspects having shallow, rocky, less developed soils. Thirdly, it tends to be associated with the altitude-rainfall gradient: shallower soils being found at higher altitudes. It is also at higher altitudes that higher rainfall is found. Variation in oxidizable carbon is chiefly accounted for by the altitude-rainfall gradient. Whereas at a biome-wide level, aspects of soil fertility are related to soil texture, it appears that on individual transects fertility is linked to amounts of plant remains in the soil and to rainfall. Apart from these gradients, which are

Identification of priority conservation areas and potential corridors for jaguars in the Caatinga biome, Brazil.

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Morato, Ronaldo Gonçalves; Ferraz, Katia Maria Paschoaletto Micchi de Barros; de Paula, Rogério Cunha; de Campos, Cláudia Bueno

2014-01-01

The jaguar, Panthera onca, is a top predator with the extant population found within the Brazilian Caatinga biome now known to be on the brink of extinction. Designing new conservation units and potential corridors are therefore crucial for the long-term survival of the species within the Caatinga biome. Thus, our aims were: 1) to recognize suitable areas for jaguar occurrence, 2) to delineate areas for jaguar conservation (PJCUs), 3) to design corridors among priority areas, and 4) to prioritize PJCUs. A total of 62 points records of jaguar occurrence and 10 potential predictors were analyzed in a GIS environment. A predictive distributional map was obtained using Species Distribution Modeling (SDM) as performed by the Maximum Entropy (Maxent) algorithm. Areas equal to or higher than the median suitability value of 0.595 were selected as of high suitability for jaguar occurrence and named as Priority Jaguar Conservation Units (PJCU). Ten PJCUs with sizes varying from 23.6 km2 to 4,311.0 km2 were identified. Afterwards, we combined the response curve, as generated by SDM, and expert opinions to create a permeability matrix and to identify least cost corridors and buffer zones between each PJCU pair. Connectivity corridors and buffer zone for jaguar movement included an area of 8.884,26 km2 and the total corridor length is about 160.94 km. Prioritizing criteria indicated the PJCU representing c.a. 68.61% of the total PJCU area (PJCU # 1) as of high priority for conservation and connectivity with others PJCUs (PJCUs # 4, 5 and 7) desirable for the long term survival of the species. In conclusion, by using the jaguar as a focal species and combining SDM and expert opinion we were able to create a valid framework for practical conservation actions at the Caatinga biome. The same approach could be used for the conservation of other carnivores.

Environmental change and the carbon balance of Amazonian forests

International Nuclear Information System (INIS)

Aragao, Luiz E.O.C.; Poulter, Benjamin

2014-01-01

Extreme climatic events and land-use change are known to influence strongly the current carbon cycle of Amazonia, and have the potential to cause significant global climate impacts. This review intends to evaluate the effects of both climate and anthropogenic perturbations on the carbon balance of the Brazilian Amazon and to understand how they interact with each other. By analysing the outputs of the Intergovernmental Panel for Climate Change (IPCC) Assessment Report 4 (AR4) model ensemble, we demonstrate that Amazonian temperatures and water stress are both likely to increase over the 21. Century. Curbing deforestation in the Brazilian Amazon by 62% in 2010 relative to the 1990's mean decreased the Brazilian Amazon's deforestation contribution to global land use carbon emissions from 17% in the 1990's and early 2000's to 9% by 2010. Carbon sources in Amazonia are likely to be dominated by climatic impacts allied with forest fires (48.3% relative contribution) during extreme droughts. The current net carbon sink (net biome productivity, NBP) of +0.16 (ranging from +0.11 to +0.21) PgCyear-1 in the Brazilian Amazon, equivalent to 13.3% of global carbon emissions from land-use change for 2008, can be negated or reversed during drought years [NBP=-0.06 (-0.31 to +0.01) PgCyear -1 ]. Therefore, reducing forest fires, in addition to reducing deforestation, would be an important measure for minimizing future emissions. Conversely, doubling the current area of secondary forests and avoiding additional removal of primary forests would help the Amazonian gross forest sink to offset approximately 42% of global land-use change emissions. We conclude that a few strategic environmental policy measures are likely to strengthen the Amazonian net carbon sink with global implications. Moreover, these actions could increase the resilience of the net carbon sink to future increases in drought frequency. (authors)

Environmental change and the carbon balance of Amazonian forests.

Science.gov (United States)

Aragão, Luiz E O C; Poulter, Benjamin; Barlow, Jos B; Anderson, Liana O; Malhi, Yadvinder; Saatchi, Sassan; Phillips, Oliver L; Gloor, Emanuel

2014-11-01

Extreme climatic events and land-use change are known to influence strongly the current carbon cycle of Amazonia, and have the potential to cause significant global climate impacts. This review intends to evaluate the effects of both climate and anthropogenic perturbations on the carbon balance of the Brazilian Amazon and to understand how they interact with each other. By analysing the outputs of the Intergovernmental Panel for Climate Change (IPCC) Assessment Report 4 (AR4) model ensemble, we demonstrate that Amazonian temperatures and water stress are both likely to increase over the 21st Century. Curbing deforestation in the Brazilian Amazon by 62% in 2010 relative to the 1990s mean decreased the Brazilian Amazon's deforestation contribution to global land use carbon emissions from 17% in the 1990s and early 2000s to 9% by 2010. Carbon sources in Amazonia are likely to be dominated by climatic impacts allied with forest fires (48.3% relative contribution) during extreme droughts. The current net carbon sink (net biome productivity, NBP) of +0.16 (ranging from +0.11 to +0.21) Pg C year(-1) in the Brazilian Amazon, equivalent to 13.3% of global carbon emissions from land-use change for 2008, can be negated or reversed during drought years [NBP = -0.06 (-0.31 to +0.01) Pg C year(-1) ]. Therefore, reducing forest fires, in addition to reducing deforestation, would be an important measure for minimizing future emissions. Conversely, doubling the current area of secondary forests and avoiding additional removal of primary forests would help the Amazonian gross forest sink to offset approximately 42% of global land-use change emissions. We conclude that a few strategic environmental policy measures are likely to strengthen the Amazonian net carbon sink with global implications. Moreover, these actions could increase the resilience of the net carbon sink to future increases in drought frequency. © 2014 The Authors. Biological Reviews © 2014 Cambridge Philosophical

Linkages Among Water Vapor Flows, Food Production, and Terrestrial Ecosystem Services

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Johan Rockström

1999-12-01

Full Text Available Global freshwater assessments have not addressed the linkages among water vapor flows, agricultural food production, and terrestrial ecosystem services. We perform the first bottom-up estimate of continental water vapor flows, subdivided into the major terrestrial biomes, and arrive at a total continental water vapor flow of 70,000 km3/yr (ranging from 56,000 to 84,000 km3/yr. Of this flow, 90% is attributed to forests, including woodlands (40,000 km3/yr, wetlands (1400 km3/yr, grasslands (15,100 km3/yr, and croplands (6800 km3/yr. These terrestrial biomes sustain society with essential welfare-supporting ecosystem services, including food production. By analyzing the freshwater requirements of an increasing demand for food in the year 2025, we discover a critical trade-off between flows of water vapor for food production and for other welfare-supporting ecosystem services. To reduce the risk of unintentional welfare losses, this trade-off must become embedded in intentional ecohydrological landscape management.

The continuing quest for the 'Holy Braille' of tactile displays

Science.gov (United States)

Runyan, Noel H.; Blazie, Deane B.

2011-10-01

The Boston-based National Braille Press has established a Center for Braille Innovation (CBI), whose mission is to research and develop affordable braille literacy products. The primary focus has been to facilitate the development of dramatically lower cost electronic braille display devices, and the much-sought-after "Holy Braille" of a full-page electronic braille display. Developing affordable new braille technologies is crucial to improving the extremely low braille literacy rate (around 12%) of blind students. Our CBI team is working to aid developers of braille technology by focusing attention and resources on the development of the underlying braille actuator technologies. We are also developing braille-related information resources to aid braille display developers. The CBI braille requirements summary (available through the NBP website (http://www.nbp.org) is one of these resources. The braille specifications include braille dot dimensions, spacing, displacement, lifting force, and response time requirements. In addition, mentoring, helping to evaluate new braille display ideas, and openly sharing braille display technology are all part of the activities of the NBP braille innovation team. NBP has expanded the CBI project with domestic and international partners including the China Braille Press, World Braille Foundation, National Federation of the Blind, American Printing House for the Blind, American Foundation for the Blind, and many university and research partners.

Biophysical Properties of Cultivated Pastures in the Brazilian Savanna Biome: An Analysis in the Spatial-Temporal Domains Based on Ground and Satellite Data

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Fernando M. Araújo

2013-01-01

Full Text Available Brazil has the largest commercial beef cattle herd in the world, with cattle ranching being particularly prominent in the 200-million ha, Brazilian neotropical moist savanna biome, known as Cerrado, one of the world’s hotspots for biodiversity conservation. As decreasing productivity is a major concern affecting the Cerrado pasturelands, evaluation of pasture conditions through the determination of biophysical parameters is instrumental for more effective management practices and herd occupation strategies. Within this context, the primary goal of this study was the regional assessment of pasture biophysical properties, through the scaling of wet- and dry-season ground truth data (total biomass, green biomass, and % green cover via the combined use of high (Landsat-TM and moderate (MODIS spatial resolution vegetation index images. Based on the high correlation found between NDVI (normalized difference vegetation index and % green cover (r = 0.95, monthly MODIS-based % green cover images were derived for the 2009–2010 hydrological cycle, which were able to capture major regional patterns and differences in pasture biophysical responses, including the increasing greenness values towards the southern portions of the biome, due to both local conditions (e.g., more fertile soils and management practices. These results corroborate the development of biophysically-based landscape degradation indices, in support of improved land use governance and natural area conservation in the Cerrado.

Science framework for conservation and restoration of the sagebrush biome: Linking the Department of the Interior’s Integrated Rangeland Fire Management Strategy to long-term strategic conservation actions

Science.gov (United States)

J.C. Chambers; J.L. Beck; J.B. Bradford; J. Bybee; S. Campbell; J. Carlson; T.J. Christiansen; K.J. Clause; G. Collins; M.R. Crist; J.B. Dinkins; K.E. Doherty; F. Edwards; S. Espinosa; K.A. Griffin; P. Griffin; J.R. Haas; S.E. Hanser; D.W. Havlina; K.F. Henke; J.D. Hennig; L.A. Joyce; F.M. Kilkenny; S.M. Kulpa; L.L. Kurth; J.D. Maestas; M. Manning; K.E. Mayer; B.A. Mealor; C. McCarthy; M. Pellant; M.A. Perea; K.L. Prentice; D.A. Pyke; L.A. Wiechman; A. Wuenschel

2017-01-01

The Science Framework is intended to link the Department of the Interior’s Integrated Rangeland Fire Management Strategy with long-term strategic conservation actions in the sagebrush biome. The Science Framework provides a multiscale approach for prioritizing areas for management and determining effective management strategies within the sagebrush biome. The emphasis...

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes.

Science.gov (United States)

Fierer, Noah; Leff, Jonathan W; Adams, Byron J; Nielsen, Uffe N; Bates, Scott Thomas; Lauber, Christian L; Owens, Sarah; Gilbert, Jack A; Wall, Diana H; Caporaso, J Gregory

2012-12-26

For centuries ecologists have studied how the diversity and functional traits of plant and animal communities vary across biomes. In contrast, we have only just begun exploring similar questions for soil microbial communities despite soil microbes being the dominant engines of biogeochemical cycles and a major pool of living biomass in terrestrial ecosystems. We used metagenomic sequencing to compare the composition and functional attributes of 16 soil microbial communities collected from cold deserts, hot deserts, forests, grasslands, and tundra. Those communities found in plant-free cold desert soils typically had the lowest levels of functional diversity (diversity of protein-coding gene categories) and the lowest levels of phylogenetic and taxonomic diversity. Across all soils, functional beta diversity was strongly correlated with taxonomic and phylogenetic beta diversity; the desert microbial communities were clearly distinct from the nondesert communities regardless of the metric used. The desert communities had higher relative abundances of genes associated with osmoregulation and dormancy, but lower relative abundances of genes associated with nutrient cycling and the catabolism of plant-derived organic compounds. Antibiotic resistance genes were consistently threefold less abundant in the desert soils than in the nondesert soils, suggesting that abiotic conditions, not competitive interactions, are more important in shaping the desert microbial communities. As the most comprehensive survey of soil taxonomic, phylogenetic, and functional diversity to date, this study demonstrates that metagenomic approaches can be used to build a predictive understanding of how microbial diversity and function vary across terrestrial biomes.

Modeling distribution of Schinus molle L. in the Brazilian Pampa: insights on vegetation dynamics and conservation of the biome

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R.P.M. Lemos

2014-12-01

Full Text Available Natural establishment of forests in the Brazilian Pampa biome should occur due to soil, hydrology and climate conditions, although no significant forest expansion over grassland has been noticed, precluded mainly by human interference and lack of environmental management. In this study, we used niche-modeling distribution of the tree species Schinus molle L. based on climatic variables to access the vegetation dynamics of the Brazilian Pampa and to develop strategies that assure the conservation of this biome, concerning both grassland and forest formations. Here we show that a large area of the Brazilian Pampa is suitable for expansion of S. molle populations, supporting the forest expansion over grassland as a natural process in this biome. We propose that the current absence of tree species expansion over the grassland in these areas is a result of the resilience of the grassland and of human interferences through expansion of agriculture, ranching and forestry with exotic species. Therefore, conservationist actions should focus on establishing preservation unities that include forest populations and grassland, while environmental management should be applied just in farming areas with historical human interference. Such actions will respect the ecological dynamics of the Pampa and value the forest formations in this grassland-dominated environment.

Thresholds for boreal biome transitions.

Science.gov (United States)

Scheffer, Marten; Hirota, Marina; Holmgren, Milena; Van Nes, Egbert H; Chapin, F Stuart

2012-12-26

Although the boreal region is warming twice as fast as the global average, the way in which the vast boreal forests and tundras may respond is poorly understood. Using satellite data, we reveal marked alternative modes in the frequency distributions of boreal tree cover. At the northern end and at the dry continental southern extremes, treeless tundra and steppe, respectively, are the only possible states. However, over a broad intermediate temperature range, these treeless states coexist with boreal forest (∼75% tree cover) and with two more open woodland states (∼20% and ∼45% tree cover). Intermediate tree covers (e.g., ∼10%, ∼30%, and ∼60% tree cover) between these distinct states are relatively rare, suggesting that they may represent unstable states where the system dwells only transiently. Mechanisms for such instabilities remain to be unraveled, but our results have important implications for the anticipated response of these ecosystems to climatic change. The data reveal that boreal forest shows no gradual decline in tree cover toward its limits. Instead, our analysis suggests that it becomes less resilient in the sense that it may more easily shift into a sparse woodland or treeless state. Similarly, the relative scarcity of the intermediate ∼10% tree cover suggests that tundra may shift relatively abruptly to a more abundant tree cover. If our inferences are correct, climate change may invoke massive nonlinear shifts in boreal biomes.

Fabricación y propiedades del carburo de silicio biomórfico: maderas cerámicas

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Varela Feria, F. M.

2002-08-01

Full Text Available There is an increasing interest in the fabrication of materials with biomorphic microstructure. In particular, the fabrication of biomorphic ceramics would be of high interest because its high-temperature structural applications. The ceramics presented in this research were fabricated by the pyrolysis and infiltration with molten silicon of wood preforms. The final product is SiC with the same microstructure of the wood precursor. Wood is a natural composite that present an anisotropic porous microstructure with excellent elasticity, strength, and damage tolerance. Some of this properties will remain improved in the ceramic product. Biomorphic ceramics reach high strengths (700 MPa at 1150 oC for biomorphic SiC made from eucalyptus wood. The influence of the wood precursor and fabrication process in the mechanical and microstructural properties has been studied. The correlation microstructure-mechanical properties is discussed, as well as the application of the cellular theory of solids.

En los últimos años se ha puesto de manifiesto un considerable interés en la fabricación y optimización de materiales de microestructura biomórfica. En particular, la fabricación de cerámicas biomórficas es especialmente importante ya que éstas pueden ser utilizadas en aplicaciones estructurales a temperaturas elevadas. Los materiales objeto de esta investigación se fabrican mediante la pirólisis e infiltración de silicio fundido en preformas de madera. El resultado final es SiC con la misma microestructura que la madera precursora. La madera es un material natural compuesto que presenta una morfología porosa anisotrópica con una excelente elasticidad, resistencia y tolerancia al daño; algunas de estas propiedades se trasladarán y amplificarán al pasar a la cerámica que se elabora a partir de la misma. Se ha estudiado la influencia de la madera seleccionada y el proceso de fabricación en las propiedades mecánicas y microestructurales

Temporal evolution of carbon budgets of the Appalachian forests in the U.S. from 1972 to 2000

Science.gov (United States)

Liu, J.; Liu, S.; Loveland, Thomas R.

2006-01-01

Estimating dynamic terrestrial ecosystem carbon (C) sources and sinks over large areas is difficult. The scaling of C sources and sinks from the field level to the regional level has been challenging due to the variations of climate, soil, vegetation, and disturbances. As part of an effort to estimate the spatial, temporal, and sectional dimensions of the United States C sources and sinks (the U.S. Carbon Trends Project), this study estimated the forest ecosystem C sequestration of the Appalachian region (186,000 km2) for the period of 1972–2000 using the General Ensemble Biogeochemical Modeling System (GEMS) that has a strong capability of assimilating land use and land cover change (LUCC) data. On 82 sampling blocks in the Appalachian region, GEMS used sequential 60 m resolution land cover change maps to capture forest stand-replacing events and used forest inventory data to estimate non-stand-replacing changes. GEMS also used Monte Carlo approaches to deal with spatial scaling issues such as initialization of forest age and soil properties. Ensemble simulations were performed to incorporate the uncertainties of input data. Simulated results show that from 1972 to 2000 the net primary productivity (NPP), net ecosystem productivity (NEP), and net biome productivity (NBP) averaged 6.2 Mg C ha−1 y−1 (±1.1), 2.2 Mg C ha−1 y−1 (±0.6), and 1.8 Mg C ha−1 y−1(±0.6), respectively. The inter-annual variability was driven mostly by climate. Detailed C budgets for the year 2000 were also calculated. Within a total 148,000 km2 forested area, average forest ecosystem C density was estimated to be 186 Mg C ha−1 (±20), of which 98 Mg C ha−1 (±12) was in biomass and 88 Mg C ha−1 (±13) was in litter and soil. The total simulated C stock of the Appalachian forests was estimated to be 2751 Tg C (±296), including 1454 Tg C (±178) in living biomass and 1297 Tg C (±192) in litter and soil. The total net C sequestration (i

Biogeography of photoautotrophs in the high polar biome

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Stephen Brian Pointing

2015-09-01

Full Text Available The global latitudinal gradient in biodiversity weakens in the high polar biome and so an alternative explanation for distribution of Arctic and Antarctic photoautotrophs is required. Here we identify how temporal, microclimate and evolutionary drivers of biogeography are important, rather than the macroclimate features that drive plant diversity patterns elsewhere. High polar ecosystems are biologically unique, with a more central role for bryophytes, lichens and microbial photoautotrophs over that of vascular plants. Constraints on vascular plants arise mainly due to stature and ontogenetic barriers. Conversely non-vascular plant and microbial photoautotroph distribution is correlated with favourable microclimates and the capacity for poikilohydric dormancy. Contemporary distribution also depends on evolutionary history, with adaptive and dispersal traits as well as legacy influencing biogeography. We highlight the relevance of these findings to predicting future impacts on polar plant diversity and to the current status of plants in Arctic and Antarctic conservation policy frameworks.

Detection of wild animals as carriers of Leptospira by PCR in the Pantanal biome, Brazil.

Science.gov (United States)

Vieira, Anahi S; Narduche, Lorena; Martins, Gabriel; Schabib Péres, Igor A H F; Zimmermann, Namor P; Juliano, Raquel S; Pellegrin, Aiesca O; Lilenbaum, Walter

2016-11-01

Leptospiral infection is widespread in wildlife. In this context, wild ecosystems in tropical countries hold a vast biodiversity, including several species that may act as potential reservoirs of leptospires. The Pantanal biome presents highly favorable environmental conditions for the occurrence of leptospirosis, such as high temperatures, constant flooding, and high biodiversity. The purpose of this study was to detect wild animals as carriers of Leptospira sp. using direct methods (PCR and culture) in the Pantanal biome, Brazil. A total of 35 animals were studied, namely Cerdocyon thous, Nasua nasua, Ozotoceros bezoarticus, and Sus scrofa species. Blood for serology (MAT) and urine for bacteriological culturing and PCR was sampled. The most prevalent serogroups were Javanica and Djasiman. Additionally, 40.6% of these animals presented PCR positive reactions. Seroreactivity associated with the high frequency of leptospiral carriers among the different studied species suggests a high level of exposure of the studied animals to pathogenic Leptospira strains. Our results are still limited and the actual role of the studied animals in the epidemiology of leptospirosis in the Pantanal region remains to be elucidated. Copyright © 2016 Elsevier B.V. All rights reserved.

Physiology of Saccharomyces cerevisiae strains isolated from Brazilian biomes: new insights into biodiversity and industrial applications

DEFF Research Database (Denmark)

Beato, Felipe B.; Bergdahl, Basti; Rosa, Carlos A.

2016-01-01

Fourteen indigenous Saccharomyces cerevisiae strains isolated from the barks of three tree species located in the Atlantic Rain Forest and Cerrado biomes in Brazil were genetically and physiologically compared to laboratory strains and to strains from the Brazilian fuel ethanol industry. Although...

Estimating carbon flux phenology with satellite-derived land surface phenology and climate drivers for different biomes: a synthesis of AmeriFlux observations.

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Wenquan Zhu

Full Text Available Carbon Flux Phenology (CFP can affect the interannual variation in Net Ecosystem Exchange (NEE of carbon between terrestrial ecosystems and the atmosphere. In this study, we proposed a methodology to estimate CFP metrics with satellite-derived Land Surface Phenology (LSP metrics and climate drivers for 4 biomes (i.e., deciduous broadleaf forest, evergreen needleleaf forest, grasslands and croplands, using 159 site-years of NEE and climate data from 32 AmeriFlux sites and MODIS vegetation index time-series data. LSP metrics combined with optimal climate drivers can explain the variability in Start of Carbon Uptake (SCU by more than 70% and End of Carbon Uptake (ECU by more than 60%. The Root Mean Square Error (RMSE of the estimations was within 8.5 days for both SCU and ECU. The estimation performance for this methodology was primarily dependent on the optimal combination of the LSP retrieval methods, the explanatory climate drivers, the biome types, and the specific CFP metric. This methodology has a potential for allowing extrapolation of CFP metrics for biomes with a distinct and detectable seasonal cycle over large areas, based on synoptic multi-temporal optical satellite data and climate data.

Climate sensitivity of shrub growth across the tundra biome

DEFF Research Database (Denmark)

Myers-Smith, Isla H.; Elmendorf, Sarah C.; Beck, Pieter S.A.

2015-01-01

Rapid climate warming in the tundra biome has been linked to increasing shrub dominance1–4. Shrub expansion can modify climate by altering surface albedo, energy and water balance, and permafrost2,5–8, yet the drivers of shrub growth remain poorly understood. Dendroecological data consisting...... of multi-decadal time series of annual shrub growth provide an underused resource to explore climate–growth relationships. Here, we analyse circumpolar data from 37 Arctic and alpine sites in 9 countries, including 25 species, and 42,000 annual growth records from 1,821 individuals. Our analyses...... demonstrate that the sensitivity of shrub growth to climate was: (1) heterogeneous, with European sites showing greater summer temperature sensitivity than North American sites, and (2) higher at sites with greater soil moisture and for taller shrubs (for example, alders and willows) growing at their northern...

Dl-3-n-Butylphthalide Treatment Enhances Hemodynamics and Ameliorates Memory Deficits in Rats with Chronic Cerebral Hypoperfusion

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Zhilin Xiong

2017-07-01

Full Text Available Our previous study has revealed that chronic cerebral hypoperfusion (CCH activates a compensatory vascular mechanism attempting to maintain an optimal cerebral blood flow (CBF. However, this compensation fails to prevent neuronal death and cognitive impairment because neurons die prior to the restoration of normal CBF. Therefore, pharmacological invention may be critical to enhance the CBF for reducing neurodegeneration and memory deficit. Dl-3-n-butylphthalide (NBP is a compound isolated from the seeds of Chinese celery and has been proven to be able to prevent neuronal loss, reduce inflammation and ameliorate memory deficits in acute ischemic animal models and stroke patients. In the present study, we used magnetic resonance imaging (MRI techniques, immunohistochemistry and Morris water maze (MWM to investigate whether NBP can accelerate CBF recovery, reduce neuronal death and improve cognitive deficits in CCH rats after permanent bilateral common carotid artery occlusion (BCCAO. Rats were intravenously injected with NBP (5 mg/kg daily for 14 days beginning the first day after BCCAO. The results showed that NBP shortened recovery time of CBF to pre-occlusion levels at 2 weeks following BCCAO, compared to 4 weeks in the vehicle group, and enhanced hemodynamic compensation through dilation of the vertebral arteries (VAs and increase in angiogenesis. NBP treatment also markedly reduced reactive astrogliosis and cell apoptosis and protected hippocampal neurons against ischemic injury. The escape latency of CCH rats in the MWM was also reduced in response to NBP treatment. These findings demonstrate that NBP can accelerate the recovery of CBF and improve cognitive function in a rat model of CCH, suggesting that NBP is a promising therapy for CCH patients or vascular dementia.

Identification of priority conservation areas and potential corridors for jaguars in the Caatinga biome, Brazil.

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Ronaldo Gonçalves Morato

Full Text Available The jaguar, Panthera onca, is a top predator with the extant population found within the Brazilian Caatinga biome now known to be on the brink of extinction. Designing new conservation units and potential corridors are therefore crucial for the long-term survival of the species within the Caatinga biome. Thus, our aims were: 1 to recognize suitable areas for jaguar occurrence, 2 to delineate areas for jaguar conservation (PJCUs, 3 to design corridors among priority areas, and 4 to prioritize PJCUs. A total of 62 points records of jaguar occurrence and 10 potential predictors were analyzed in a GIS environment. A predictive distributional map was obtained using Species Distribution Modeling (SDM as performed by the Maximum Entropy (Maxent algorithm. Areas equal to or higher than the median suitability value of 0.595 were selected as of high suitability for jaguar occurrence and named as Priority Jaguar Conservation Units (PJCU. Ten PJCUs with sizes varying from 23.6 km2 to 4,311.0 km2 were identified. Afterwards, we combined the response curve, as generated by SDM, and expert opinions to create a permeability matrix and to identify least cost corridors and buffer zones between each PJCU pair. Connectivity corridors and buffer zone for jaguar movement included an area of 8.884,26 km2 and the total corridor length is about 160.94 km. Prioritizing criteria indicated the PJCU representing c.a. 68.61% of the total PJCU area (PJCU # 1 as of high priority for conservation and connectivity with others PJCUs (PJCUs # 4, 5 and 7 desirable for the long term survival of the species. In conclusion, by using the jaguar as a focal species and combining SDM and expert opinion we were able to create a valid framework for practical conservation actions at the Caatinga biome. The same approach could be used for the conservation of other carnivores.

Comparison and Validation of Long Time Serial Global GEOV1 and Regional Australian MODIS Fractional Vegetation Cover Products Over the Australian Continent

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Yanling Ding

2015-05-01

Full Text Available Fractional vegetation cover (FVC is one of the most critical parameters in monitoring vegetation status. Comprehensive assessment of the FVC products is critical for their improvement and use in land surface models. This study investigates the performances of two major long time serial FVC products: GEOV1 and Australian MODIS. The spatial and temporal consistencies of these products were compared during the 2000–2012 period over the main biome types across the Australian continent. Their accuracies were validated by 443 FVC in-situ measurements during the 2011–2012 period. Our results show that there are strong correlations between the GEOV1 and Australian MODIS FVC products over the main Australian continent while they exhibit large differences and uncertainties in the coastal regions covered by dense forests. GEOV1 and Australian MODIS describe similar seasonal variations over the main biome types with differences in magnitude, while Australian MODIS exhibit unstable temporal variations over grasslands and shifted seasonal variations over evergreen broadleaf forests. The GEOV1 and Australian MODIS products overestimate FVC values over the biome types with high vegetation density and underestimate FVC in sparsely vegetated areas and grasslands. Overall, the GEOV1 and Australian MODIS FVC products agree with in-situ FVC values with a RMSE around 0.10 over the Australian continent.

L-3-n-Butylphthalide Regulates Proliferation, Migration, and Differentiation of Neural Stem Cell In Vitro and Promotes Neurogenesis in APP/PS1 Mouse Model by Regulating BDNF/TrkB/CREB/Akt Pathway.

Science.gov (United States)

Lei, Hui; Zhang, Yu; Huang, Longjian; Xu, Shaofeng; Li, Jiang; Yang, Lichao; Wang, Ling; Xing, Changhong; Wang, Xiaoliang; Peng, Ying

2018-05-04

Alzheimer's disease (AD) is characterized by extracellular accumulation of β-amyloid peptides (Aβ) and intracellular neurofibrillary tangles, along with cognitive decline and neurodegeneration. The cognitive deficit is considered to be due to the dysfunction of hippocampal neurogenesis. Although L-3-n-butylphthalide (L-NBP) has been shown beneficial effects in multiple AD animal models, the underlying molecular mechanisms are still elusive. In this study, we investigated the effects of L-NBP on neurogenesis both in vitro and in vivo. L-NBP promoted proliferation and migration of neural stem cells and induced neuronal differentiation in vitro. In APP/PS1 mice, L-NBP induced neurogenesis in the dentate gyrus and improved cognitive functions. In addition, L-NBP significantly increased the expressions of BDNF and NGF, tyrosine phosphorylation of its cognate receptor, and phosphorylation of Akt as well as CREB at Ser133 in the hippocampus of APP/PS1 mice. These results indicated that L-NBP might stimulate the proliferation, migration, and differentiation of hippocampal neural stem cells and reversed cognitive deficits in APP/PS1 mice. BDNF/TrkB/CREB/Akt signaling pathway might be involved.

Biométria de frutos e sementes de Luetzelburgia auriculata (Allemão Ducke

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Roberto Ferreira Barroso

2016-12-01

Full Text Available A Caatinga apresenta uma grande diversidade de espécies vegetais, dentre elas Luetzelburgia auriculata é uma das espécies predominantes no bioma, desempenhando papel fundamental para o ecossistema local. Este trabalho objetivou descrever as características biométricas de frutos e sementes de Luetzelburgia auriculata.  Para a descrição das características da semente foram coletados 200 frutos e 200 sementes de plantas nativas do município de Santa Helena, Paraíba. As amostras foram encaminhadas ao Laboratório de Nutrição Mineral de Plantas do Centro de Saúde e Tecnologia Rural de Universidade Federal de Campina Grande para a realização das devidas aferições biométricas. Os frutos foram analisado pelo comprimento, espessura superior, mediana e inferior; largura superior, mediana e inferior. Para as sementes, foram analisados comprimento, espessura e a largura. Verificou-se que o comprimento dos frutos variou de 50,7 a 98,2 cm, a espessura de 6,00 a 17 mm e largura variando de 12,4 a 21,8 mm. Em relação às sementes, 46% se enquadraram na classe de comprimento com intervalo de 19,9 a 20,8 mm. A espécie Luetzelburgia auriculata apresentam variabilidade nas características biométricas de frutos e sementesBiometrics of fruit and seeds of Luetzelburgia auriculata (Allemão DuckeAbstract: The Caatinga presents a great diversity of plant species, among them the woodpecker (Luetzelburgia auriculata (Allemao Ducke. is one of the predominant species in the biome, playing a fundament al role for the local ecosystem. This work aimed to describe the biometric characteristics of fruits and seeds of Pau de Pedra. For the description of the characteristics of the Luetzelburgia auriculata (Allemão Ducke seed, 200 fruits and 200 seeds of native plants of the municipality of Santa Helena, Paraíba state were collected for biometry and seed mass. Afterwards they were packed in plastic bags and properly identified and taken to Laboratório de

Biome-scale nitrogen fixation strategies selected by climatic constraints on nitrogen cycle.

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Sheffer, Efrat; Batterman, Sarah A; Levin, Simon A; Hedin, Lars O

2015-11-23

Dinitrogen fixation by plants (in symbiosis with root bacteria) is a major source of new nitrogen for land ecosystems(1). A long-standing puzzle(2) is that trees capable of nitrogen fixation are abundant in nitrogen-rich tropical forests, but absent or restricted to early successional stages in nitrogen-poor extra-tropical forests. This biome-scale pattern presents an evolutionary paradox(3), given that the physiological cost(4) of nitrogen fixation predicts the opposite pattern: fixers should be out-competed by non-fixers in nitrogen-rich conditions, but competitively superior in nitrogen-poor soils. Here we evaluate whether this paradox can be explained by the existence of different fixation strategies in tropical versus extra-tropical trees: facultative fixers (capable of downregulating fixation(5,6) by sanctioning mutualistic bacteria(7)) are common in the tropics, whereas obligate fixers (less able to downregulate fixation) dominate at higher latitudes. Using a game-theoretic approach, we assess the ecological and evolutionary conditions under which these fixation strategies emerge, and examine their dependence on climate-driven differences in the nitrogen cycle. We show that in the tropics, transient soil nitrogen deficits following disturbance and rapid tree growth favour a facultative strategy and the coexistence of fixers and non-fixers. In contrast, sustained nitrogen deficits following disturbance in extra-tropical forests favour an obligate fixation strategy, and cause fixers to be excluded in late successional stages. We conclude that biome-scale differences in the abundance of nitrogen fixers can be explained by the interaction between individual plant strategies and climatic constraints on the nitrogen cycle over evolutionary time.

Characterizing forest carbon stocks at tropical biome and landscape level in Mount Apo National Park, Philippines

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Rubas, L. C.

2012-12-01

Forest resources sequester and store carbon, and serve as a natural brake on climate change. In the tropics, the largest source of greenhouse emission is from deforestation and forest degradation (Gibbs et al 2007). This paper attempts to compile sixty (60) existing studies on using remote sensing to measure key environmental forest indicators at two levels of scales: biome and landscape level. At the tropical forest biome level, there is not as much remote sensing studies that have been done as compared to other forest biomes. Also, existing studies on tropical Asia is still sparse compared to other tropical regions in Latin America and Africa. Biomass map is also produced for the tropical biome using keyhole macro language (KML) which is projected on Google Earth. The compiled studies showed there are four indicators being measured using remote sensors in tropical forest. These are biomass, landcover classification, deforestation and cloud cover. The landscape level will focus on Mount Apo National Park in the Philippines which is encompassing a total area of 54,974.87 hectares. It is one of the ten priority sites targeted in the World Bank-assisted Biodiversity Conservation Program. This park serves as the major watershed for the three provinces with 19 major rivers emanating from the montane formations. Only a small fraction of the natural forest that once covered the country remains. In spite of different policies that aim to reduce logging recent commercial deforestation, illegal logging and agricultural expansion pose an important threat to the remaining forest areas. In some locations in the country, these hotspots of deforestation overlap with the protected areas (Verburg et al 2006). The study site was clipped using ArcGIS from the forest biomass carbon density map produced by Gibbs and Brown (2007). Characterization on this national park using vegetation density, elevation, slope, land cover and precipitation will be conducted to determine factors that

The role of non-thermal atmospheric pressure biocompatible plasma in the differentiation of osteoblastic precursor cells, MC3T3-E1.

Science.gov (United States)

Han, Ihn; Choi, Eun Ha

2017-05-30

Non-thermal atmospheric pressure plasma is ionized matter, composed of highly reactive species that include positive ions, negative ions, free radicals, neutral atoms, and molecules. Recent reports have suggested that non-thermal biocompatible plasma (NBP) can selectively kill a variety of cancer cells, and promote stem cell differentiation. However as of yet, the regulation of proliferation and differentiation potential of NBP has been poorly understood.Here, we investigated the effects of NBP on the osteogenic differentiation of precursor cell lines of osteoblasts, MC3T3 E1 and SaOS-2. For in vitro osteogenic differentiation, precursor cell lines were treated with NBP, and cultured with osteogenic induction medium. After 10 days of treatment, the NBP was shown to be effective in osteogenic differentiation in MC3T3 E1 cells by von Kossa and Alizarin Red S staining assay. Real-time PCR was then performed to investigate the expression of osteogenic specific genes, Runx2, OCN, COL1, ALP and osterix in MC3T3 E1 cells after treatment with NBP for 4 days. Furthermore, analysis of the protein expression showed that NBP treatment significantly reduced PI3K/AKT signaling and MAPK family signaling. However, p38 controlled phosphorylation of transcription factor forkhead box O1 (FoxO1) that related to cell differentiation with increased phosphorylated p38. These results suggest that non-thermal atmospheric pressure plasma can induce osteogenic differentiation, and enhance bone formation.

Above- and Belowground Biomass Allocation in Shrub Biomes across the Northeast Tibetan Plateau

Science.gov (United States)

Yang, Yuanhe; Yang, Lucun; Zhou, Guoying

2016-01-01

Biomass partitioning has been explored across various biomes. However, the strategies of allocation in plants still remain contentious. This study investigated allocation patterns of above- and belowground biomass at the community level, using biomass survey from the Tibetan Plateau. We explored above- and belowground biomass by conducting three consecutive sampling campaigns across shrub biomes on the northeast Tibetan Plateau during 2011–2013. We then documented the above-ground biomass (AGB), below-ground biomass (BGB) and root: shoot ratio (R/S) and the relationships between R/S and environment factors using data from 201 plots surveyed from 67 sites. We further examined relationships between above-ground and below-ground biomass across various shrub types. Our results indicated that the median values of AGB, BGB, and R/S in Tibetan shrub were 1102.55, 874.91 g m-2, and 0.85, respectively. R/S showed significant trend with mean annual precipitation (MAP), while decreased with mean annual temperature (MAT). Reduced major axis analysis indicated that the slope of the log-log relationship between above- and belowground biomass revealed a significant difference from 1.0 over space, supporting the optimal hypothesis. Interestingly, the slopes of the allometric relationship between log AGB and log BGB differed significantly between alpine and desert shrub. Our findings supported the optimal theory of above- and belowground biomass partitioning in Tibetan shrub, while the isometric hypothesis for alpine shrub at the community level. PMID:27119379

Relationships of leaf dark respiration to leaf nitrogen, specific leaf area and leaf life-span: a test across biomes and functional groups.

Science.gov (United States)

Reich, Peter B; Walters, Michael B; Ellsworth, David S; Vose, James M; Volin, John C; Gresham, Charles; Bowman, William D

1998-05-01

Based on prior evidence of coordinated multiple leaf trait scaling, we hypothesized that variation among species in leaf dark respiration rate (R d ) should scale with variation in traits such as leaf nitrogen (N), leaf life-span, specific leaf area (SLA), and net photosynthetic capacity (A max ). However, it is not known whether such scaling, if it exists, is similar among disparate biomes and plant functional types. We tested this idea by examining the interspecific relationships between R d measured at a standard temperature and leaf life-span, N, SLA and A max for 69 species from four functional groups (forbs, broad-leafed trees and shrubs, and needle-leafed conifers) in six biomes traversing the Americas: alpine tundra/subalpine forest, Colorado; cold temperate forest/grassland, Wisconsin; cool temperate forest, North Carolina; desert/shrubland, New Mexico; subtropical forest, South Carolina; and tropical rain forest, Amazonas, Venezuela. Area-based R d was positively related to area-based leaf N within functional groups and for all species pooled, but not when comparing among species within any site. At all sites, mass-based R d (R d-mass ) decreased sharply with increasing leaf life-span and was positively related to SLA and mass-based A max and leaf N (leaf N mass ). These intra-biome relationships were similar in shape and slope among sites, where in each case we compared species belonging to different plant functional groups. Significant R d-mass -N mass relationships were observed in all functional groups (pooled across sites), but the relationships differed, with higher R d at any given leaf N in functional groups (such as forbs) with higher SLA and shorter leaf life-span. Regardless of biome or functional group, R d-mass was well predicted by all combinations of leaf life-span, N mass and/or SLA (r 2 ≥ 0.79, P morphological, chemical and metabolic traits.

Stormflow influence on nutrient dynamics in micro-catchments under contrasting land use in the Cerrado and Amazon Biomes, Brazil

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Edelmann, Katharina; Nóbrega, Rodolfo L. B.; Gerold, Gerhard

2017-04-01

The Amazon and Cerrado biomes in Brazil have been under intense land-use change during the past few decades. The conversion of native vegetation to pastures and croplands has caused impacts on hydrological processes in these biomes, resulting in increased streamflow and nutrient fluxes. Our aim was to compare the nutrient dynamics during stormflow events in two pairs of adjacent micro-catchments with similar physical characteristics under contrasting land use, i.e. native vegetation (rainforest or cerrado) and pasture. One pair of catchments was located in the Amazon and the other in the Cerrado, both on the Amazon Agricultural Frontier in the Brazilian states of Mato Grosso and Pará. We collected hydrological and hydrochemical data on 50 stormflow events on a sub-hourly resolution during the wet seasons of 2013 and 2014. We compared the dynamics of total inorganic carbon (TIC), total organic carbon (TOC), dissolved organic carbon (DOC), nitrate (NO3), calcium (Ca), potassium (K), and magnesium (Mg) in different hydrograph parts, i.e. rising limb, peak and recession limb, between the catchments within the same biome. For the Cerrado biome, our findings show that the nutrient concentrations in the stormflows were higher in the pasture catchment than in the cerrado catchment. In the Amazon biome, we found an inverse relationship with higher concentrations in the forest catchment than in the pasture catchment, except for TIC and K. Most nutrients in the cerrado catchment had the highest concentrations in the rising limb. Mg, however, reached highest concentrations during peak discharge, and lowest in the recession limb. In the adjacent pasture catchment, in contrast, the highest nutrient concentrations were observed during the peak discharge (TIC, TOC, Ca) or the recession limb (DOC, NO3, K, Mg) with lowest in the rising limb, except for NO3, which showed the lowest concentrations during peak discharge. In the Amazon forest catchment, the peak discharge showed the

Callus production and regeneration of the medicinal plant Papaver ...

African Journals Online (AJOL)

Administrator

2011-09-19

Sep 19, 2011 ... and morphinan alkaloids production in two species of opium poppy. Biomed. Biotechnol. 1(2): 70-78. Murashige T, Skoog F (1962). A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol. Plant, 15: 473-497. Rao AQ, Hussain SS, Shahzad MS, Bokhari SYA, Raza MH, Rakha ...

Modeling the grazing effect on dry grassland carbon cycling with modified Biome-BGC grazing model

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Luo, Geping; Han, Qifei; Li, Chaofan; Yang, Liao

2014-05-01

Identifying the factors that determine the carbon source/sink strength of ecosystems is important for reducing uncertainty in the global carbon cycle. Arid grassland ecosystems are a widely distributed biome type in Xinjiang, Northwest China, covering approximately one-fourth the country's land surface. These grasslands are the habitat for many endemic and rare plant and animal species and are also used as pastoral land for livestock. Using the modified Biome-BGC grazing model, we modeled carbon dynamics in Xinjiang for grasslands that varied in grazing intensity. In general, this regional simulation estimated that the grassland ecosystems in Xinjiang acted as a net carbon source, with a value of 0.38 Pg C over the period 1979-2007. There were significant effects of grazing on carbon dynamics. An over-compensatory effect in net primary productivity (NPP) and vegetation carbon (C) stock was observed when grazing intensity was lower than 0.40 head/ha. Grazing resulted in a net carbon source of 23.45 g C m-2 yr-1, which equaled 0.37 Pg in Xinjiang in the last 29 years. In general, grazing decreased vegetation C stock, while an increasing trend was observed with low grazing intensity. The soil C increased significantly (17%) with long-term grazing, while the soil C stock exhibited a steady trend without grazing. These findings have implications for grassland ecosystem management as it relates to carbon sequestration and climate change mitigation, e.g., removal of grazing should be considered in strategies that aim to increase terrestrial carbon sequestrations at local and regional scales. One of the greatest limitations in quantifying the effects of herbivores on carbon cycling is identifying the grazing systems and intensities within a given region. We hope our study emphasizes the need for large-scale assessments of how grazing impacts carbon cycling. Most terrestrial ecosystems in Xinjiang have been affected by disturbances to a greater or lesser extent in the past

Feedbacks between land cover and climate changes in the Brazilian Amazon and Cerrado biomes

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Coe, M. T.; Silverio, D. V.; Bustamante, M.; Macedo, M.; Shimbo, J.; Brando, P. M.

2016-12-01

An estimated 20% of Amazon forests and 45% of Cerrado savannas have been cleared to make way for the expansion of croplands and pasturelands in Brazil. Although deforestation rates have decreased or remained steady over the last decade, the cumulative area deforested continues to grow in both biomes. These land-use transitions are expected to influence regional climate by reducing evapotranspiration (ET), increasing land surface temperatures (LST), and ultimately reducing regional precipitation. Here we present results from spatial analyses to quantify the impact of land-use transitions on the regional climate of the Amazon-Cerrado agricultural frontier. The analyses combine satellite observations and model outputs from the MODIS dataset. Results from the southeastern Amazon indicate that transitions from forest to pasture or cropland decreased mean annual ET (by 24% and 32%, respectively) and increased LST (by 4.2°C and 6.4°C). Preliminary results from the Cerrado indicate that transitions from woody savannas to pasture or cropland also result in substantial reductions in mean annual ET (23% and 20%, respectively) and increases in LST (by 1.6°C in both cases). These results reinforce the need to better understand how land-use change at regional scales may alter climate by changing ecosystem properties (beyond carbon stocks and fluxes). It is important to evaluate these responses across different biomes, particularly in tropical regions under increasing deforestation pressure.

Use of placental vascularization indices and uterine artery peak systolic velocity in early detection of pregnancies complicated by gestational diabetes, chronic or gestational hypertension, and preeclampsia at risk.

Science.gov (United States)

Altorjay, Ábel T; Surányi, Andrea; Nyári, Tibor; Németh, Gábor

2017-04-14

We aimed to investigate correlations between uterine artery peak systolic velocity (AUtPSV), and placental vascularization in groups of normal blood pressure (NBP) and hypertensive disorders of pregnancy (chronic hypertension (CHT), gestational hypertension (GHT) and preeclampsia (PE)) alone or in combination with gestational diabetes mellitus (GDM), and hypothesized that AUtPSV rises when GDM complicates pregnancy hypertension. Placental 3-dimensional power Doppler indices, such as vascularization index (VI), flow index (FI), and vascularization-flow index (VFI), and uterine artery peak systolic velocity (AUtPSV) were measured in CHT (N=43), CHT+GDM (N=15), GHT (N=57), GHT+GDM (N=23) and PE (N=17) pregnancies, and compared to NBP (N=109). Correlations were analyzed between vascularization indices, AUtPSV, pregestational BMI and adverse pregnancy outcome rates. In our results VI was higher in CHT (P=0.010), while FI was lower in CHT (P=0.009), GHT and PE (P=0.001) compared to NBP. In case of VFI, significant difference was found between CHT and GHT (P=0.002), and NBP and PE (P=0.001). FI was found prognostic for umbilical pH and neonatal birth weight. Pre-gestational BMI was significantly higher in GHT+GDM compared to GHT, and in CHT+GDM compared to the CHT group. As for AUtPSV, significant difference was found between NBP and CHT (P=0.012), NBP and CHT+GDM (P=0.045), NBP and GHT+GDM (P=0.007), NBP and PE (P=0.032), and GHT and GHT+GDM (P=0.048) groups. Our study revealed that vascularization indices and AUtPSV show significant differences due to gestational pathology, and can be useful in detection of pregnancies at risk.

Assessing MODIS GPP in Non-Forested Biomes in Water Limited Areas Using EC Tower Data

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Flor Álvarez-Taboada

2015-03-01

Full Text Available Although shrublands, savannas and grasslands account for 37% of the world’s terrestrial area, not many studies have analysed the role of these ecosystems in the global carbon cycle at a regional scale. The MODIS Gross Primary Production (GPP product is used here to help bridge this gap. In this study, the agreement between the MODIS GPP product (GPPm and the GPP Eddy Covariance tower data (GPPec was tested for six different sites in temperate and dry climatic regions (three grasslands, two shrublands and one evergreen forest. Results of this study show that for the non-forest sites in water-limited areas, GPPm is well correlated with GPPec at annual scales (r2 = 0.77, n = 12; SEE = 149.26 g C∙m−2∙year−1, although it tends to overestimate GPP and it is less accurate in the sites with permanent water restrictions. The use of biome-specific models based on precipitation measurements at a finer spatial resolution than the Data Assimilation Office (DAO values can increase the accuracy of these estimations. The seasonal dynamics and the beginning and end of the growing season were well captured by GPPm for the sites where (i the productivity was low throughout the year or (ii the changes in the flux trend were abrupt, usually due to the restrictions in water availability. The agreement between GPPec and GPPm in non-forested sites was lower on a weekly basis than at an annual scale (0.44 ≤ r2 ≤ 0.49, but these results were improved by including meteorological data at a finer spatial scale, and soil water content and temperature measurements in the model developed to predict GPPec (0.52 ≤ r2 ≤ 0.65.

Record of the Buff-fronted Owl (Aegolius harrisii in the Pampa Biome, southern Brazil

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Marluci Müller Rebelato

2011-02-01

Full Text Available We present the second record of the Buff-fronted Owl (Aegolius harrisii in the Pampa Biome, South Brazil. On 17 January 2010 an adult male was found dead at the roadside along the BR-290, São Gabriel municipality, center-east of Rio Grande do Sul state. The specimen probably collided with a car when using the area for foraging. The record reported here agrees with the suggestion that A. harrisii can use disturbed and open areas.

Estimating California ecosystem carbon change using process model and land cover disturbance data: 1951-2000

Science.gov (United States)

Liu, Jinxun; Vogelmann, James E.; Zhu, Zhiliang; Key, Carl H.; Sleeter, Benjamin M.; Price, D.T.; Chen, Jing M.; Cochrane, Mark A.; Eidenshink, Jeffery C.; Howard, Stephen M.; Bliss, Norman B.; Jiang, Hong

2011-01-01

Land use change, natural disturbance, and climate change directly alter ecosystem productivity and carbon stock level. The estimation of ecosystem carbon dynamics depends on the quality of land cover change data and the effectiveness of the ecosystem models that represent the vegetation growth processes and disturbance effects. We used the Integrated Biosphere Simulator (IBIS) and a set of 30- to 60-m resolution fire and land cover change data to examine the carbon changes of California's forests, shrublands, and grasslands. Simulation results indicate that during 1951–2000, the net primary productivity (NPP) increased by 7%, from 72.2 to 77.1 Tg C yr−1 (1 teragram = 1012 g), mainly due to CO2 fertilization, since the climate hardly changed during this period. Similarly, heterotrophic respiration increased by 5%, from 69.4 to 73.1 Tg C yr−1, mainly due to increased forest soil carbon and temperature. Net ecosystem production (NEP) was highly variable in the 50-year period but on average equalled 3.0 Tg C yr−1 (total of 149 Tg C). As with NEP, the net biome production (NBP) was also highly variable but averaged −0.55 Tg C yr−1 (total of –27.3 Tg C) because NBP in the 1980s was very low (–5.34 Tg C yr−1). During the study period, a total of 126 Tg carbon were removed by logging and land use change, and 50 Tg carbon were directly removed by wildland fires. For carbon pools, the estimated total living upper canopy (tree) biomass decreased from 928 to 834 Tg C, and the understory (including shrub and grass) biomass increased from 59 to 63 Tg C. Soil carbon and dead biomass carbon increased from 1136 to 1197 Tg C.Our analyses suggest that both natural and human processes have significant influence on the carbon change in California. During 1951–2000, climate interannual variability was the key driving force for the large interannual changes of ecosystem carbon source and sink at the state level, while logging and fire

A method to determine warm and cool steppe biomes from pollen data; application to the Mediterranean and Kazakhstan regions

NARCIS (Netherlands)

Tarasov, PE; Cheddadi, R; Guiot, J; Bottema, S; Peyron, O; Belmonte, J; Ruiz-Sanchez, [No Value; Saadi, F; Brewer, S

1998-01-01

An objective method for the assignment of pollen spectra to appropriate biomes has been published recently. The aim of this paper is to improve the distinction between warm and cool steppes, thus refining vegetation and climate reconstruction, particularly during the Last Glacial Maximum. A set of

Microbial quality of soil from the Pampa biome in response to different grazing pressures

Directory of Open Access Journals (Sweden)

Rafael S. Vargas

2015-06-01

Full Text Available The aim of this study was to evaluate the impact of different grazing pressures on the activity and diversity of soil bacteria. We performed a long-term experiment in Eldorado do Sul, southern Brazil, that assessed three levels of grazing pressure: high pressure (HP, with 4% herbage allowance (HA, moderate pressure (MP, with 12% HA, and low pressure (LP, with 16% HA. Two reference areas were also assessed, one of never-grazed native vegetation (NG and another of regenerated vegetation after two years of grazing (RG. Soil samples were evaluated for microbial biomass and enzymatic (β-glucosidase, arylsulfatase and urease activities. The structure of the bacterial community and the population of diazotrophic bacteria were evaluated by RFLP of the 16S rRNA and nifH genes, respectively. The diversity of diazotrophic bacteria was assessed by partial sequencing of the 16S rDNA gene. The presence of grazing animals increased soil microbial biomass in MP and HP. The structures of the bacterial community and the populations of diazotrophic bacteria were altered by the different grazing managements, with a greater diversity of diazotrophic bacteria in the LP treatment. Based on the characteristics evaluated, the MP treatment was the most appropriate for animal production and conservation of the Pampa biome.

Effect of postharvest practices including degreening on citrus carpoplane microbial biomes.

Science.gov (United States)

Gomba, A; Chidamba, L; Korsten, L

2017-04-01

To investigate the effect of commercial citrus packhouse processing steps on the fruit surface microbiome of Clementines and Palmer navel oranges. Viable bacteria, yeast and fungi counts, and the pyrosequencing analysis of the 16S rRNA and ITS were used to evaluate the community structure and population dynamics of phylloepiphytic bacteria and fungi associated with commercial postharvest processing. Drenching significantly reduced microbial counts in all cases except for yeasts on navels, while the extent of degreening effects varied between the citrus varieties. Pyrosequencing analysis showed a total of 4409 bacteria and 5792 fungi nonchimeric unique sequences with an average of 1102 bacteria and 1448 fungi reads per sample. Dominant phyla on the citrus carpoplane were Proteobacteria (53·5%), Actinobacteria (19·9%), Bacteroidetes (5·6%) and Deinococcus-Thermus (5·4%) for bacteria and Ascomycota (80·5%) and Basidiomycota (9·8%) for fungi. Beginning with freshly harvested fruit fungal diversity declined significantly after drenching, but had little effect on bacteria and populations recovered during degreening treatments, including those for Penicillium sp. Packhouse processing greatly influences microbial communities on the citrus carpoplane. A broad orange biome was described with pyrosequencing and gave insight into the likely survival and persistence of pathogens, especially as they may affect the quality and safety of the packed product. A close examination of the microbiota of fruit and the impact of intervention strategies on the ecological balance may provide a more durable approach to reduce losses and spoilage. © 2017 The Society for Applied Microbiology.

Retrieval of daily gross primary production over Europe and Africa from an ensemble of SEVIRI/MSG products

Science.gov (United States)

Martínez, B.; Sanchez-Ruiz, S.; Gilabert, M. A.; Moreno, A.; Campos-Taberner, M.; García-Haro, F. J.; Trigo, I. F.; Aurela, M.; Brümmer, C.; Carrara, A.; De Ligne, A.; Gianelle, D.; Grünwald, T.; Limousin, J. M.; Lohila, A.; Mammarella, I.; Sottocornola, M.; Steinbrecher, R.; Tagesson, T.

2018-03-01

The main goal of this paper is to derive a method for a daily gross primary production (GPP) product over Europe and Africa taking the full advantage of the SEVIRI/MSG satellite products from the European Organization for the Exploitation of Meteorological Satellites (EUMETSAT) sensors delivered from the Satellite Application Facility for Land Surface Analysis (LSA SAF) system. Special attention is paid to model the daily GPP response from an optimized Montheith's light use efficiency model under dry conditions by controlling water shortage limitations from the actual evapotranspiration and the potential evapotranspiration (PET). The PET was parameterized using the mean daily air temperature at 2 m (Ta) from ERA-Interim data. The GPP product (MSG GPP) was produced for 2012 and assessed by direct site-level comparison with GPP from eddy covariance data (EC GPP). MSG GPP presents relative bias errors lower than 40% for the most forest vegetation types with a high agreement (r > 0.7) when compared with EC GPP. For drylands, MSG GPP reproduces the seasonal variations related to water limitation in a good agreement with site level GPP estimates (RMSE = 2.11 g m-2 day-1; MBE = -0.63 g m-2 day-1), especially for the dry season. A consistency analysis against other GPP satellite products (MOD17A2 and FLUXCOM) reveals a high consistency among products (RMSD Africa. The major GPP disagreement arises over moist biomes in central Africa (RMSD > 3.0 g m-2 day-1) and over dry biomes with MSG GPP estimates lower than FLUXCOM (MBD up to -3.0 g m-2 day-1). This newly derived product has the potential for analysing spatial patterns and temporal dynamics of GPP at the MSG spatial resolutions on a daily basis allowing to better capture the GPP dynamics and magnitude.

Climate Change Impacts for the Conterminous USA. An Integrated Assessment. Part 6. Distribution and Productivity of Unmanaged Ecosystems

Energy Technology Data Exchange (ETDEWEB)

Izaurralde, R.C.; Thomson, A.M.; Rosenberg, N.J. [The Joint Global Change Research Institute, 8400 Baltimore Avenue, Suite 201, College Park, Maryland, 20740-2496 (United States); Brown, R.A. [Independent Project Analysis, 11150 Sunset Hills Rd., Suite 3, Reston, Virginia, 20190 (United States)

2005-03-01

Human activities have altered the distribution and quality of terrestrial ecosystems. Future demands for goods and services from terrestrial ecosystems will occur in a world experiencing human-induced climate change. In this study, we characterize the range in response of unmanaged ecosystems in the conterminous U.S. to 12 climate change scenarios. We obtained this response by simulating the climatically induced shifts in net primary productivity and geographical distribution of major biomes in the conterminous U.S. with the BIOME 3 model. BIOME 3 captured well the potential distribution of major biomes across the U.S. under baseline (current) climate. BIOME 3 also reproduced the general trends of observed net primary production (NPP) acceptably. The NPP projections were reasonable for forests, but not for grasslands where the simulated values were always greater than those observed. Changes in NPP would be most severe under the BMRC climate change scenario in which severe changes in regional temperatures are projected. Under the UIUC and UIUC + Sulfate scenarios, NPP generally increases, especially in the West where increases in precipitation are projected to be greatest. A CO2-fertilization effect either amplified increases or alleviated losses in modeled NPP. Changes in NPP were also associated with changes in the geographic distribution of major biomes. Temperate/boreal mixed forests would cover less land in the U.S. under most of the climate change scenarios examined. Conversely, the temperate conifer and temperate deciduous forests would increase in areal extent under the UIUC and UIUC + Sulfate scenarios. The Arid Shrubland/Steppe would spread significantly across the southwest U.S. under the BMRC scenario. A map overlay of the simulated regions that would lose or gain capacity to produce corn and wheat on top of the projected distribution of natural ecosystems under the BMRC and UIUC scenarios (Global mean temperature increase of +2.5C, no CO2 effect

The genetic structure of the mountain forest butterfly Erebia euryale unravels the late Pleistocene and postglacial history of the mountain coniferous forest biome in Europe.

Science.gov (United States)

Schmitt, Thomas; Haubrich, Karola

2008-05-01

The distribution of the mountain coniferous forest biome in Europe throughout time is not sufficiently understood. One character species of this habitat type is the large ringlet, Erebia euryale well reflecting the extension of this biome today, and the genetic differentiation of this species among and within mountain systems may unravel the late Pleistocene history of this habitat type. We therefore analysed the allozyme pattern of 381 E. euryale individuals from 11 populations in four different European mountain systems (Pyrenees, Alps, Carpathians, Rila). All loci analysed were polymorphic. The mean F(ST) over all samples was high (20%). Furthermore, the mean genetic distance among samples was quite high (0.049). We found four different groups well supported by cluster analyses, bootstraps and hierarchical variance analyses: Pyrenees, western Alps, eastern Alps and southeastern Europe (Carpathians and Rila). The genetic diversity of the populations was highest in the southeastern European group and stepwise decreased westwards. Interestingly, the populations from Bulgaria and Romania were almost identical; therefore, we assume that they were not separated by the Danube Valley, at least during the last ice age. On the contrary, the differentiation among the three western Alps populations was considerable. For all these reasons, we assume that (i) the most important refugial area for the coniferous mountain forest biome in Europe has been located in southeastern Europe including at least parts of the Carpathians and the Bulgarian mountains; (ii) important refugial areas for this biome existed at the southeastern edge of the Alps; (iii) fragments of this habitat types survived along the southwestern Alps, but in a more scattered distribution; and (iv) relatively small relicts have persisted somewhere at the foothills of the Pyrenees.

Dl-3-n-Butylphthalide Inhibits NLRP3 Inflammasome and Mitigates Alzheimer's-Like Pathology via Nrf2-TXNIP-TrX Axis.

Science.gov (United States)

Wang, Chun-Yan; Xu, Ye; Wang, Xu; Guo, Chuang; Wang, Tao; Wang, Zhan-You

2018-04-25

Oxidative stress and neuroinflammation play important roles in the pathology of Alzheimer's disease (AD). Thioredoxin-interacting protein (TXNIP), an endogenous inhibitor of antioxidant thioredoxin, is suspected to be an important modulator of oxidative stress and inflammation. However, the underlying mechanism involved in the abnormal homeostasis of TXNIP-thioredoxin (TrX) in AD pathogenesis remains unclear. Using the Swedish mutant form of APP (APPswe)/PSEN1dE9 transgenic mouse (APP/PS1) and human-derived neuronal cells as model systems, we disclosed the impairment of the nuclear factor erythroid 2-related factor 2 (Nrf2)-TXNIP-TrX signaling in Alzheimer's-like pathology. We observed that the immune staining of TXNIP was increased in postmortem AD brain. The chronic accumulation of inflammatory mediator in neuronal cells facilitates interactions of TXNIP-nucleotide binding oligomerization domain-like receptor family, pyrin domain containing 3 (NLRP3) and NLRP3-ASC, which increases β-amyloid (Aβ) secretion. The antioxidant Dl-3-n-butylphthalide (Dl-NBP) is commonly used for cerebral ischemia treatment. In our study, we elucidated for new mechanisms by which Dl-NBP enhanced TrX activity, suppressed TXNIP, and ameliorated neuronal apoptosis in the APP/PS1 mouse brains. In human glioblastoma A172 cells and neuroblastoma SH-SY5Y cells, we delineated the Dl-NBP-mediated signaling pathways by which Dl-NBP-dependent upregulation of Nrf2 mediated the reciprocal regulation of reducing proinflammatory cytokine and inhibiting Aβ production in the glial and neuronal cells overexpressing APPswe. Our data provide a novel insight into the molecular mechanism that impairments of Nrf2-TXNIP-TrX system may be involved in the imbalance of cellular redox homeostasis and inflammatory damage in the AD brain. Dl-NBP treatment could suppress TXNIP-NLRP3 interaction and inhibit NLRP3 inflammasome activation via upregulating Nrf2. These findings may provide an instrumental therapeutic

Diseño curricular para el proceso de enseñanza-aprendizaje acelerado del español como lengua extranjera en las ciencias biomédicas

OpenAIRE

Herrera Santana, Diana Josefa

2009-01-01

El prestigio alcanzado por la medicina cubana ha suscitado un gran incremento en la matrícula de estudiantes extranjeros que vienen a Cuba a cursar estudios en las ciencias biomédicas, tanto en el pregrado como en el postgrado. Antes tales demandas, el Ministerio de Salud Pública, en el año 1996, asumió la preparación idiomática en idioma español de los estudiantes extranjeros que decidían estudiar en Cuba alguna de las ramas de las ciencias biomédicas. En el presente informe se exponen los p...

Análisis bibliométrico de las publicaciones sobre síndrome metabólico en dos revistas biomédicas colombianas de alto impacto

OpenAIRE

María Alejandra Recio; Nathalie Yepes; Freddy Moreno

2017-01-01

Objetivo: Realizar un análisis bibliométrico de las publicaciones sobre síndrome metabólico (SM) en las dos revistas biomédicas colombianas de mayor impacto. Materiales y métodos: Estudio descriptivo documental que realizó un análisis bibliométrico de las publicaciones sobre SM en las revistas Biomédica y Colombia Médica. Para el análisis se emplearon indicadores bibliométricos (tipo de artículo, año de publicación, información de los autores, universidad, tipo de universidad, ciudad, país, á...

Correlation of Noninvasive Blood Pressure and Invasive Intra-arterial Blood Pressure in Patients Treated with Vasoactive Medications in a Neurocritical Care Unit.

Science.gov (United States)

Saherwala, Ali A; Stutzman, Sonja E; Osman, Mohamed; Kalia, Junaid; Figueroa, Stephen A; Olson, DaiWai M; Aiyagari, Venkatesh

2018-03-22

The correlation between noninvasive (oscillometric) blood pressure (NBP) and intra-arterial blood pressure (IAP) in critically ill patients receiving vasoactive medications in a Neurocritical Care Unit has not been systematically studied. The purpose of this study is to examine the relationship between simultaneously measured NBP and IAP recordings in these patients. Prospective observational study of patients (N = 70) admitted to a neurocritical care unit receiving continuous vasopressor or antihypertensive infusions. Paired NBP/IAP observations along with covariate and demographic data were abstracted via chart audit. Analysis was performed using SAS v9.4. A total of 2177 paired NBP/IAP observations from 70 subjects (49% male, 63% white, mean age 59 years) receiving vasopressors (n = 21) or antihypertensive agents (n = 49) were collected. Paired t test analysis showed significant differences between NBP versus IAP readings: ([systolic blood pressure (SBP): mean = 136 vs. 140 mmHg; p blood pressure (DBP): mean = 70 vs. 68 mmHg, p blood pressure (MAP): mean = 86 vs. 90 mmHg, p blood pressures. Pearson correlation coefficients show strong positive correlations for paired MAP (r = 0.82), SBP (r = 0.84), and DBP (r = 0.73) recordings. An absolute NBP-IAP SBP difference of > 20 mmHg was seen in ~ 20% of observations of nicardipine, ~ 25% of observations of norepinephrine, and ~ 35% of observations of phenylephrine. For MAP, the corresponding numbers were ~ 10, 15, and 25% for nicardipine, norepinephrine, and phenylephrine, respectively. Despite overall strong positive correlations between paired NBP and IAP readings of MAP and SBP, clinically relevant differences in blood pressure are frequent. When treating with vasoactive infusions targeted to a specific BP goal, it is important to keep in mind that NBP and IAP values are not interchangeable.

Carbon emission as a function of energy generation in hydroelectric reservoirs in Brazilian dry tropical biome

International Nuclear Information System (INIS)

Ometto, Jean P.; Cimbleris, André C.P.; Santos, Marco A. dos; Rosa, Luiz P.; Abe, Donato; Tundisi, José G.; Stech, José L.; Barros, Nathan; Roland, Fábio

2013-01-01

Most energy generation globally is fueled by coal and oil, raising concerns about greenhouse gas emissions. Hydroelectric reservoirs are anthropogenic aquatic systems that occur across a wide geographical extent, and, in addition to their importance for energy production, they have the potential to release two important greenhouse gases (GHGs), carbon dioxide and methane. We report results from an extensive study of eight hydroelectric reservoirs located in central and southeastern tropical Brazil. In the Brazilian dry tropical biome reservoirs, emissions (in tons of CO 2 Eq. per MW h) varied from 0.01 to 0.55, and decreased with reservoir age. Total emissions were higher in the reservoir lake when compared to the river downstream the dam; however, emissions per unit area, in the first kilometer of the river after the dam, were higher than that in the reservoir. The results showed, despite higher carbon emissions per energy production in the youngest reservoirs, lower emission from hydroelectric reservoirs from the studied region in relation to thermo electrical supply, fueled by coal or fossil fuel. The ratio emission of GHG per MWh produced is an important parameter in evaluating the service provided by hydroelectric reservoir and for energy planning policies. - Highlights: ► Hydroelectric reservoirs construction is growing worldwide. ► The effect of hydropower reservoir in the carbon cycle is dependent on environment characteristics. ► Carbon emissions per energy production are higher in the youngest tropical savannah reservoirs. ► Methane emissions decrease with reservoir age in tropical savannah reservoirs. ► In general, the effect of hydropower in the carbon cycle is lower than other energy sources

Brachial plexopathy: recurrent cancer or radiation

International Nuclear Information System (INIS)

Lederman, R.J.; Wilbourn, A.J.

1984-01-01

We reviewed clinical and electrodiagnostic features of 16 patients with neoplastic brachial plexopathy (NBP) and 17 patients with radiation-induced plexopathy (RBP). The groups were similar in symptom-free interval after cancer diagnosis and location of the plexus lesions. NBP patients had pain and Horner's syndrome; RBP patients had paresthesias, but rarely Horner's. NBP patients presented earlier after symptom onset and had a shorter course. RBP patients more frequently had abnormal sensory and normal motor nerve conduction studies and characteristically had fasciculations or myokymia on EMG

Environmental history of the dry forest biome of Guerrero, Mexico, and human impact during the last c. 2700 years

NARCIS (Netherlands)

Berrio, J.C.; Hooghiemstra, H.; van Geel, B.; Ludlow-Wiegers, B.

2006-01-01

Two lake sediment cores from Madre del Sur mountain range, Guerrero State, west-central Mexico were studied to examine the past dynamics of the dry forest biome. Pollen, spores of coprophilous fungi, cyanobacteria and lithological changes are presented. The 390-cm Tixtla core (17°30′N, 99°24′W, 1400

Using P-Stat, BMDP and SPSS for a cross-products factor analysis.

Science.gov (United States)

Tanner, B A; Leiman, J M

1983-06-01

The major disadvantage of the Q factor analysis with Euclidean distances described by Tanner and Koning [Comput. Progr. Biomed. 12 (1980) 201-202] is the considerable editing required. An alternative procedure with commercially distributed software, and with cross-products in place of Euclidean distances is described. This procedure does not require any editing.

Microbial Community Profile and Water Quality in a Protected Area of the Caatinga Biome.

Science.gov (United States)

Lopes, Fabyano Alvares Cardoso; Catão, Elisa Caldeira Pires; Santana, Renata Henrique; Cabral, Anderson de Souza; Paranhos, Rodolfo; Rangel, Thiago Pessanha; de Rezende, Carlos Eduardo; Edwards, Robert A; Thompson, Cristiane C; Thompson, Fabiano L; Kruger, Ricardo Henrique

2016-01-01

The Caatinga is a semi-arid biome in northeast Brazil. The Paraguaçú River is located in the Caatinga biome, and part of its course is protected by the National Park of Chapada Diamantina (PNCD). In this study we evaluated the effect of PNCD protection on the water quality and microbial community diversity of this river by analyzing water samples obtained from points located inside and outside the PNCD in both wet and dry seasons. Results of water quality analysis showed higher levels of silicate, ammonia, particulate organic carbon, and nitrite in samples from the unprotected area compared with those from protected areas. Pyrosequencing of the 16S rRNA genes revealed that Burkholderiales was abundant in samples from all three sites during both seasons and was represented primarily by the genus Polynucleobacter and members of the Comamonadaceae family (e.g., genus Limnohabitans). During the dry season, the unprotected area showed a higher abundance of Flavobacterium sp. and Arthrobacter sp., which are frequently associated with the presence and/or degradation of arsenic and pesticide compounds. In addition, genes that appear to be related to agricultural impacts on the environment, as well as those involved in arsenic and cadmium resistance, copper homeostasis, and propanediol utilization, were detected in the unprotected areas by metagenomic sequencing. Although PNCD protection improves water quality, agricultural activities around the park may affect water quality within the park and may account for the presence of bacteria capable of pesticide degradation and assimilation, evidencing possible anthropogenic impacts on the Caatinga.

USING LUDIC ACTIVITIES TO EXPLAIN THE BIOME CONCEPT

Directory of Open Access Journals (Sweden)

Aline Riccioni de Melos

2015-12-01

Full Text Available This paper contributes to research on the role of ludic activities in teaching and learning physical geography content during the last four years of primary school. We question the discourse that identifies students’ lack of interest as the obstacle to teaching physical geography. This study contributes by questioning this obstacle. We note that few studies exist on this topic, according to the CAPES (Coordination for higher Education Staff Development dissertation database, in 2011 only five were completed. The theoretical basis for the study considers work by Graciolli (2009, Silva et al. (2010, Rupel (2011 and Freitas and Salvi (2011, authors who defend the use of ludic activities in teaching methodology. In 2010, the “Biome Game” for 6th year students was developed based on this theoretical framework as part of the required course “Supervised Practice”. The goal of the activity was to think about how the concept of biome was created, and the methodology used valued recreational approaches. The empirical results of this experiment, which involved developing and implementing the game during the Supervised Practice course, demonstrate the importance of ludic pedagogical strategies for teaching physical geography in Brazilian primary education. O presente artigo traz contribuições de pesquisa sobre a função da ludicidade no ensino-aprendizagem de conteúdos da geografia física, no segundo segmento do ensino fundamental. Tal questão problematiza o discurso sobre o desinteresse dos alunos, como significativo obstáculo para a didática da geografia física. A pertinência do presente estudo está em reconhecer esta questão, tendo em vista que existem poucos estudos na área, totalizando em 2011, segundo o banco de dissertações da CAPES, somente cinco trabalhos concluídos. Nossa investigação dialoga com Graciolli (2009, Silva et al. (2010, Rupel (2011 e Freitas e Salvi (2011, autores dedicados à defesa da utilização de

Plant litter dynamics in the forest-stream interface: precipitation is a major control across tropical biomes

OpenAIRE

Tonin, Alan M.; Gon?alves, Jos? F.; Bambi, Paulino; Couceiro, Sheyla R. M.; Feitoza, Lorrane A. M.; Fontana, Lucas E.; Hamada, Neusa; Hepp, Luiz U.; Lezan-Kowalczuk, V?nia G.; Leite, Gustavo F. M.; Lemes-Silva, Aurea L.; Lisboa, Leonardo K.; Loureiro, Rafael C.; Martins, Renato T.; Medeiros, Adriana O.

2017-01-01

Riparian plant litter is a major energy source for forested streams across the world and its decomposition has repercussions on nutrient cycling, food webs and ecosystem functioning. However, we know little about plant litter dynamics in tropical streams, even?though the tropics occupy 40% of the Earth?s land surface. Here we investigated spatial and temporal (along a year cycle) patterns of litter inputs and storage in multiple streams of three tropical biomes in Brazil (Atlantic forest, Ama...

Microestructura y propiedades mecánicas del SiC biomórfico obtenido a partir de eucalipto

Directory of Open Access Journals (Sweden)

Presas, M.

2005-12-01

Full Text Available The development of cellular ceramics with a biological structure, like bones and wood, has been a matter of interest in recent years. A low density highly interconnected structure, perfected by evolution, rises as the principal advantage of these materials. In the case of biomimetic SiC (biomorphic SiC, or bioSiC, the fabrication process technique is quite simple: a piece of wood is pyrolysed and is infiltrated with molten silicon after, the final product is a composite Si/SiC, which replicates the wood anisotropic microstructure This work focus on the mechanical properties of bioSiC fabricated using eucalyptus wood as precursor (hard wood with a bimodal channel distribution. It has been studied the mechanical behavior of this bioSiC (compression strength, flexure strength, fracture toughness and elastic modulus between 25 and 1350 oC. It is also discussed the relationship between mechanical behavior of the material and its microstructure.

El desarrollo de materiales cerámicos con una estructura de tipo celular, similar a la del hueso o la madera, ha sido una cuestión que ha suscitado un gran interés en los últimos años. Su atractivo se debe al hecho de poseer una estructura porosa altamente interconectada de baja densidad, perfeccionada por la evolución. En el caso del SiC biomórfico (bio-SiC el proceso de fabricación es sencillo: se piroliza una pieza de madera y a continuación se inyecta con silicio líquido, el material así obtenido es un compuesto Si/SiC en el que el SiC mimetiza la estructura de la madera original. En este trabajo se estudian las propiedades mecánicas del SiC biomórfico fabricado a partir de eucalipto (madera dura con una distribución bimodal de poros. Se ha estudiado el comportamiento mecánico del mismo (resistencia a compresión, resistencia a flexión, tenacidad de fractura y módulo de elasticidad entre 25 y 1350 oC. Asimismo, se discute la relación entre el comportamiento mecánico del material y

Techno-Economic Assessment of Micro-Algae Production Systems

OpenAIRE

Hoffman, Justin

2016-01-01

Global oil consumption is rising at an unprecedented rate renewing interest in alternative fuels. Micro-algae represents a promising feedstock due to inherent advantages such as high solar energy efficiencies, large lipid fractions, and utilization of various waste streams including industrial flue gas. Current technological challenges have limited the commercial viability of microalgae based biofuel production systems. This study directly evaluates and compares the economic viability of biom...

Design and standardization of PCR primers and protocols for detection of clonal immunoglobulin and T-cell receptor gene recombinations in suspect lymphoproliferations: Report of the BIOMED-2 Concerted Action BMH4-CT98-3936 : Report of the BIOMED-2 Concerted Action BMH4-CT98-3936

NARCIS (Netherlands)

van Dongen, J.J.M.; Langerak, A.W.; Bruggemann, M.; Evans, P.A.S.; Hummel, M.; Lavender, F.L.; Delabesse, E.; Davi, F.; Schuuring, E.; Garcia-Sanz, R.; Van Krieken, J.H.J.M.; Droese, J.; Gonzalez, D.; Bastard, C.; White, H.E.; Spaargaren, M.; Gonzalez, M.; Parreira, A.; Smith, J.L.; Morgan, G.J.; Kneba, M.; Macintyre, E.A.

2003-01-01

In a European BIOMED-2 collaborative study, multiplex PCR assays have successfully been developed and standardized for the detection of clonally rearranged immunoglobulin (Ig) and T-cell receptor (TCR) genes and the chromosome aberrations t(11; 14) and t(14; 18). This has resulted in 107 different

Land-use change and soil type are drivers of fungal and archaeal communities in the Pampa biome.

Science.gov (United States)

Lupatini, Manoeli; Jacques, Rodrigo Josemar Seminoti; Antoniolli, Zaida Inês; Suleiman, Afnan Khalil Ahmad; Fulthorpe, Roberta R; Roesch, Luiz Fernando Würdig

2013-02-01

The current study aimed to test the hypothesis that both land-use change and soil type are responsible for the major changes in the fungal and archaeal community structure and functioning of the soil microbial community in Brazilian Pampa biome. Soil samples were collected at sites with different land-uses (native grassland, native forest, Eucalyptus and Acacia plantation, soybean and watermelon field) and in a typical toposequence in Pampa biome formed by Paleudult, Albaqualf and alluvial soils. The structure of soil microbial community (archaeal and fungal) was evaluated by ribosomal intergenic spacer analysis and soil functional capabilities were measured by microbial biomass carbon and metabolic quotient. We detected different patterns in microbial community driven by land-use change and soil type, showing that both factors are significant drivers of fungal and archaeal community structure and biomass and microbial activity. Fungal community structure was more affected by land-use and archaeal community was more affected by soil type. Irrespective of the land-use or soil type, a large percentage of operational taxonomic unit were shared among the soils. We accepted the hypothesis that both land-use change and soil type are drivers of archaeal and fungal community structure and soil functional capabilities. Moreover, we also suggest the existence of a soil microbial core.

Nitrogen Fertilizer Deep Placement for Increased Grain Yield and Nitrogen Recovery Efficiency in Rice Grown in Subtropical China

Directory of Open Access Journals (Sweden)

Meng Wu

2017-07-01

Full Text Available Field plot experiments were conducted over 3 years (from April 2014 to November 2016 in a double-rice (Oryza sativa L. cropping system in subtropical China to evaluate the effects of N fertilizer placement on grain yield and N recovery efficiency (NRE. Different N application methods included: no N application (CK; N broadcast application (NBP; N and NPK deep placement (NDP and NPKDP, respectively. Results showed that grain yield and apparent NRE significantly increased for NDP and NPKDP as compared to NBP. The main reason was that N deep placement (NDP increased the number of productive panicle per m-2. To further evaluate the increase, a pot experiment was conducted to understand the N supply in different soil layers in NDP during the whole rice growing stage and a 15N tracing technique was used in a field experiment to investigate the fate of urea-15N in the rice–soil system during rice growth and at maturity. The pot experiment indicated that NDP could maintain a higher N supply in deep soil layers than N broadcast for 52 days during rice growth. The 15N tracing study showed that NDP could maintain much higher fertilizer N in the 5–20 cm soil layer during rice growth and could induce plant to absorb more N from fertilizer and soil than NBP, which led to higher NRE. One important finding was that NDP and NPKDP significantly increased fertilizer NRE but did not lead to N declined in soil compared to NBP. Compared to NPK, NPKDP induced rice plants to absorb more fertilizer N rather than soil N.

Towards reconstructing herbaceous biome dynamics and associated precipitation in Africa: insights from the classification of grass morphological traits

Science.gov (United States)

Pasturel, Marine; Alexandre, Anne; Novello, Alice; Moctar Dieye, Amadou; Wele, Abdoulaye; Paradis, Laure; Hely, Christelle

2014-05-01

Inter-tropical herbaceous ecosystems occupy a 1/5th of terrestrial surface, a half of the African continent, and are expected to extend in the next decades. Dynamic of these ecosystems is simulated with poor accuracy by Dynamic Global Vegetation Models (DGVMs). One of the bias results from the fact that the diversity of the grass layer dominating these herbaceous ecosystems is poorly taken into account. Mean annual precipitation and the length of the dry season are the main constrains of the dynamics of these ecosystems. Conversely, changes in vegetation affect the water cycle. Inaccuracy in herbaceous ecosystem simulation thus impacts simulations of the water cycle (including precipitation) and vice versa. In order to increase our knowledge of the relationships between grass morphological traits, taxonomy, biomes and climatic niches in Western and South Africa, a 3-step methodology was followed: i) values of culm height, leaf length and width of dominant grass species from Senegal were gathered from flora and clustered using the Partition Around Medoids (PAM) method; ii) trait group ability to sign climatic domains and biomes was assessed using Kruskal-Wallis tests; iii) genericity and robustness of the trait groups were evaluated through their application to Chadian and South African botanical datasets. Results show that 8 grass trait groups are present either in Senegal, Chad or South Africa. These 8 trait groups are distributed along mean annual precipitation and dry season length gradients. The combination of three of them allow to discriminate mean annual precipitation domains (1000 mm) and herbaceous biomes (steppes, savannas, South African grasslands and Nama-Karoo). With these results in hand, grass Plant Functional Types (PFTs) of the DGMV LPJ-GUESS will be re-parameterized and particular attention will be given to the herbaceous biomass assigned to each grass trait group. Simultaneously, relationships between grass trait groups and phytolith vegetation

Land use influence in the Cerrado biome water quality: a comparative study between watersheds in the Goiás State, Brazil

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Luis Fernando Stone

2009-08-01

Full Text Available Based on the assumption that the water quality in a watershed is directly related to the degree of equilibrium between the natural and anthropic factors, in this paper we examined the effects of the land cover changes in areas of savanna (Cerrado biome over the watersheds ecological viability (expressed here as Water Quality Index. Thus, we analyzed two middle-sized basins located in the Goiás State (a representative area of this biome, with different characteristics regarding both the physical aspects (soil, topography and remnant vegetation and human aspects (environmental degradation level and economic development index: (1 João Leite basin, located in the Center-South State (anthropic level = 88%, and (2 São Domingos basin, in the Northern State (anthropic level = 25%. Chemical analyses have indicated that the water in the São Domingos basin presents, in general, a better quality for human consumption and for the ecosystem maintaining, reflecting the high conservation state of this basin as well.

Importance of bee pollination for cotton production in conventional and organic farms in Brazil

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Viviane C. Pires

2014-08-01

Full Text Available This study aimed to evaluate the importance of wild bee and feral honeybee visits for cotton production on conventional and organic farms. Experiments were conducted in Brazil, on a conventional cotton farm in Mato Grosso state in the Amazon biome and on an organic farm in Paraíba state in the Caatinga biome. On the conventional farm, bee assemblage and cotton production were measured near to and far from natural vegetation. Bee richness, fibre fraction, seed number and yield (Kg/ha were higher by 57.14, 1.95, 17.77 and 18.44% respectively in plots near natural vegetation, but bee abundance did not vary with distance to natural vegetation. On the organic farm, because the cropping area is surrounded by natural vegetation, pollination deficit was evaluated using an exclusion experiment where cotton production of flowers bagged to prevent bee visitation (spontaneous self-pollination was compared to production of flowers open to bee visitation (open pollination. Open pollinated flowers had higher average boll weight, fibre weight and seed number. Although cotton is not directly dependent on bee pollination, bees increased cotton production on the organic farm by more than 12% for fibre weight and over 17% for seed number. Our data confirm the importance of maintaining communities of pollinators on cotton farms, especially for organic production.

[Temporal and spatial heterogeneity analysis of optimal value of sensitive parameters in ecological process model: The BIOME-BGC model as an example.

Science.gov (United States)

Li, Yi Zhe; Zhang, Ting Long; Liu, Qiu Yu; Li, Ying

2018-01-01

The ecological process models are powerful tools for studying terrestrial ecosystem water and carbon cycle at present. However, there are many parameters for these models, and weather the reasonable values of these parameters were taken, have important impact on the models simulation results. In the past, the sensitivity and the optimization of model parameters were analyzed and discussed in many researches. But the temporal and spatial heterogeneity of the optimal parameters is less concerned. In this paper, the BIOME-BGC model was used as an example. In the evergreen broad-leaved forest, deciduous broad-leaved forest and C3 grassland, the sensitive parameters of the model were selected by constructing the sensitivity judgment index with two experimental sites selected under each vegetation type. The objective function was constructed by using the simulated annealing algorithm combined with the flux data to obtain the monthly optimal values of the sensitive parameters at each site. Then we constructed the temporal heterogeneity judgment index, the spatial heterogeneity judgment index and the temporal and spatial heterogeneity judgment index to quantitatively analyze the temporal and spatial heterogeneity of the optimal values of the model sensitive parameters. The results showed that the sensitivity of BIOME-BGC model parameters was different under different vegetation types, but the selected sensitive parameters were mostly consistent. The optimal values of the sensitive parameters of BIOME-BGC model mostly presented time-space heterogeneity to different degrees which varied with vegetation types. The sensitive parameters related to vegetation physiology and ecology had relatively little temporal and spatial heterogeneity while those related to environment and phenology had generally larger temporal and spatial heterogeneity. In addition, the temporal heterogeneity of the optimal values of the model sensitive parameters showed a significant linear correlation

The Intestinal Eukaryotic and Bacterial Biome of Spotted Hyenas: The Impact of Social Status and Age on Diversity and Composition.

Science.gov (United States)

Heitlinger, Emanuel; Ferreira, Susana C M; Thierer, Dagmar; Hofer, Heribert; East, Marion L

2017-01-01

In mammals, two factors likely to affect the diversity and composition of intestinal bacteria (bacterial microbiome) and eukaryotes (eukaryome) are social status and age. In species in which social status determines access to resources, socially dominant animals maintain better immune processes and health status than subordinates. As high species diversity is an index of ecosystem health, the intestinal biome of healthier, socially dominant animals should be more diverse than those of subordinates. Gradual colonization of the juvenile intestine after birth predicts lower intestinal biome diversity in juveniles than adults. We tested these predictions on the effect of: (1) age (juvenile/adult) and (2) social status (low/high) on bacterial microbiome and eukaryome diversity and composition in the spotted hyena ( Crocuta crocuta ), a highly social, female-dominated carnivore in which social status determines access to resources. We comprehensively screened feces from 35 individually known adult females and 7 juveniles in the Serengeti ecosystem for bacteria and eukaryotes, using a set of 48 different amplicons (4 for bacterial 16S, 44 for eukaryote 18S) in a multi-amplicon sequencing approach. We compared sequence abundances to classical coprological egg or oocyst counts. For all parasite taxa detected in more than six samples, the number of sequence reads significantly predicted the number of eggs or oocysts counted, underscoring the value of an amplicon sequencing approach for quantitative measurements of parasite load. In line with our predictions, our results revealed a significantly less diverse microbiome in juveniles than adults and a significantly higher diversity of eukaryotes in high-ranking than low-ranking animals. We propose that free-ranging wildlife can provide an intriguing model system to assess the adaptive value of intestinal biome diversity for both bacteria and eukaryotes.

Comment on Chiesi et al. (2011): “Use of BIOME-BGC to simulate Mediterranean forest carbon stocks”

OpenAIRE

Eastaugh CS

2011-01-01

The mechanistic forest growth model BIOME-BGC utilizes a “spin-up” procedure to estimate site parameters for forests in a steady-state condition, as they may have been expected to be prior to anthropogenic influence. Forests in this condition have no net growth, as living biomass accumulation is balanced by mortality. To simulate current ecosystems it is necessary to reset the model to reflect a forest of the correct development stage. The alternative approach of simply post-adjus...

Using simulated annealing algorithm to optimize the parameters of Biome-BGC model%利用模拟退火算法优化Biome-BGC模型参数

Institute of Scientific and Technical Information of China (English)

张廷龙; 孙睿; 胡波; 冯丽超

2011-01-01

生态过程模型建立在明确的机理之上,能够较好地模拟陆地生态系统的行为和特征,但模型众多的参数,成为模型具体应用的瓶颈.本文以Biome-BGC模型为例,采用模拟退火算法,对其生理、生态参数进行优化.在优化过程中,先对待优化参数进行了选择,然后采取逐步优化的方法进行优化.结果表明,使用优化后的参数,模型模拟结果与实际观测更为接近,参数优化能有效地降低模型模拟的不确定性.文中参数优化的过程和方法,可为生态模型的参数识别和优化提供一种实例和思路,有助于生态模型应用区域的扩展.%Ecological process model based on defined mechanism can well simulate the dynamic behaviors and features of terrestrial ecosystem, but could become a bottleneck in application because of numerous parameters needed to be confirmed. In this paper, simulated annealing algorithm was used to optimize the physiological and ecological parameters of Biome-BGC model. The first step was to choose some of these parameters to optimize, and then, gradually optimized these parameters. By using the optimized parameters, the model simulation results were much more close to the observed data, and the parameter optimization could effectively reduce the uncertainty of model simulation. The parameter optimization method used in this paper could provide a case and an idea for the parameter identification and optimization of ecological process models,and also, help to expand the application area of the models.

Análisis de eficacia, seguridad y racionalidad de la combinación a dosis fija (CDF) de dos hipoglicemiantes orales (Metformina* Glimepirida) en publicaciones biomédicas,2000-2012

OpenAIRE

Figueroa Salvador, Linder Juanito

2014-01-01

Difusión Total de la Tesis Objetivo: Analizar los resultados de eficacia, seguridad y racionalidad de la combinación a dosis fija (CDF) de dos hipoglicemiantes orales (metformina + glimepirida) en publicaciones biomédicas, 2000-2012. Método: Se usó un estudio cuantitativo, revisión documental y retrospectivo, en el cual la unidad de análisis y la muestra fueron los estudios clínicos controlados aleatorizados (ECCA) y número total de publicaciones biomédicas desde el 2000 – 2012 respectivam...

Biométrica, normalización de los cuerpos y control de fronteras en la Unión Europea

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Estela Schindel

2018-03-01

Full Text Available Las tecnologías biométricas de control de fronteras están siendo crecientemente investigadas y empleadas por la Unión Europea. La combinación de información digitalizada proveniente de diversas fuentes corporales (iris, huellas dactilares, reconocimiento facial entre otras así como de potenciales indicadores conductuales plantean una serie de preguntas en términos del derecho a la privacidad y la protección de la integridad individual. Más allá de estas cuestiones, sin embargo, la biometría plantea interrogantes complejos en relación al estatuto mismo del cuerpo y de lo humano. Las llamadas “anomalías de registro” en la captura de datos biométricos revelan una construcción del cuerpo humano “normal”, mientras que otros son producidos como menos compatibles tecnológicamente. Esta construcción reproduce supuestos fuertemente asentados en el imaginario eurocéntrico, que construyen al otro no europeo como un ser cercano a la naturaleza. Al mismo tiempo, señala el ámbito al que se desplazan las disputas y desobediencias futuras, que es el del cuerpo mismo.

Climate induced changes in biome distribution, NPP and hydrology for potential vegetation of the Upper Midwest U.S

Science.gov (United States)

Motew, M.; Kucharik, C. J.

2011-12-01

While much attention is focused on future impacts of climate change on ecosystems, much can be learned about the previous interactions of ecosystems with recent climate change. In this study, we investigated the impacts of climate change on potential vegetation distributions (i.e. grasses, trees, and shrubs) and carbon and water cycling across the Upper Midwest USA from 1948-2007 using the Agro-IBIS dynamic vegetation model. We drove the model using a historical, gridded daily climate data set (temperature, precipitation, humidity, solar radiation, and wind speed) at a spatial resolution of 5 min x 5 min. While trends in climate variables exhibited heterogeneous spatial patterns over the study period, the overall impact of climate change on vegetation productivity was positive. We observed total increases in net primary productivity (NPP) ranging from 20-150 g C m-2, based on linear regression analysis. We determined that increased summer relative humidity, increased annual precipitation and decreased mean maximum summer temperatures were key variables contributing to these positive trends, likely through a reduction in soil moisture stress (e.g., increased available water) and heat stress. Model simulations also illustrated an increase in annual drainage throughout the region of 20-140 mm yr-1, driven by substantial increases in annual precipitation. Evapotranspiration had a highly variable spatial trend over the 60-year period, with total change over the study period ranging between -100 and +100 mm yr-1. We also analyzed potential changes in plant functional type (PFT) distributions at the biome level, but hypothesize that the model may be unable to adequately capture competitive interactions among PFTs as well as the dynamics between upper and lower canopies consisting of trees, grasses and shrubs. An analysis of the bioclimatic envelopes for PFTs common to the region revealed no significant change to the boreal conifer tree climatic domain over the study

Uso da rugoscopia palatina como ferramenta biométrica: um estudo populacional em Niterói-RJ, Brasil

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Igor Iuco CASTRO-SILVA

Full Text Available Introdução: Pesquisas por métodos biométricos auxiliares em perícias têm crescido na Odontologia Legal. Objetivo: Este estudo avaliou a eficácia da rugoscopia palatina na identificação humana. Material e método: Foram utilizados 184 modelos de gesso de estudantes voluntários em Niterói-RJ, para delineamento de suas rugosidades palatinas, sendo classificadas segundo quantidade, direção (sistema de Carrea e formato individual (sistema de Silva, e comparadas às variáveis demográficas sexo, cor da pele e idade. A análise estatística foi realizada com o teste qui-quadrado para amostras independentes, considerando-se p<0,05. Resultado: Houve maior prevalência de 2-7 rugas em homens. O tipo IV de Carrea e o tipo 1 de Silva foram mais evidentes, porém sem diferenças intergrupos significativas, de acordo com as variáveis propostas. Conclusão: A rugoscopia palatina é uma ferramenta biométrica viável e fornece informações morfológicas individuais relevantes, embora sua análise cega e em tempo único não exiba acurácia na estratificação populacional.

Cartas al editor publicadas en revistas biomédicas peruanas indizadas en SciELO-Perú 2006-2013

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Juan José Montenegro-Idrogo

Full Text Available Estudio bibliométrico que describe las características de cartas al editor publicadas en el período 2006-2013 en revistas biomédicas indizadas a SciELO-Perú. Se recopilaron 253 cartas (10,3% del total de publicaciones, el mayor número de cartas (139 fue de la Revista Peruana de Medicina Experimental y Salud Pública, con notorio aumento por años. El 25% de cartas presentaron participación médico-estudiantil. El 14% de cartas presentaron autores con filiación internacional y 27% de cartas con filiación endogénica - frecuente en revistas universitarias (AFM, RMH. Los criterios habituales que justifican la publicación de cartas fueron: opinión sobre hecho médico o de dominio público (35,6% y discusión de resultados, defectos metodológicos o de interpretación (22,9%. En revistas biomédicas indizadas a SciELO-Perú las cartas al editor constituyen un porcentaje de publicaciones que ha aumentado en los últimos años, con baja la publicación de cartas de hallazgos o datos propios, en comparación con criterios de opinión o crítica

Hydrology of a Water‐Limited Forest under Climate Change Scenarios: The Case of the Caatinga Biome, Brazil

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Everton Alves Rodrigues Pinheiro

2017-02-01

Full Text Available Given the strong interactions between climate and vegetation, climate change effects on natural and agricultural ecosystems are common objects of research. Reduced water availability is predicted to take place across large regions of the globe, including Northeastern Brazil. The Caatinga, a complex tropical water‐limited ecosystem and the only exclusively Brazilian biome, prevails as the main natural forest of this region. The aim of this study was to examine the soil‐water balance for this biome under a climate‐warming scenario and with reduced rainfall. Climate change projections were assessed from regional circulation models earlier applied to the Brazilian territory. A statistical climate data generator was used to compose a synthetic weather dataset, which was later integrated into a hydrological model. Compared to simulations with current climate for the same site, under the scenario with climate change, transpiration was enhanced by 36%, and soilwater evaporation and interception were reduced by 16% and 34%, respectively. The greatest change in soil‐water components was observed for deep drainage, accounting only for 2% of the annual rainfall. Soil‐plant‐atmosphere fluxes seem to be controlled by the top layer (0.0-0.2 m, which provides 80% of the total transpiration, suggesting that the Caatinga forest may become completely soil‐water pulse dominated under scenarios of reduced water availability.

Environmental and ice volume changes based on seismic stratigraphy in Sabrina Coast, East Antarctica: Preliminary results from NBP1402

Science.gov (United States)

Gulick, S. P. S.; Fernandez-Vasquez, R. A.; Frederick, B.; Saustrup, S., Sr.; Domack, E. W.; Lavoie, C.; Shevenell, A.; Blankenship, D. D.; Leventer, A.

2014-12-01

In 2014, the R/V Nathaniel B. Palmer (NBP1402) sailed to a virtually unexplored continental shelf along the Sabrina Coast, East Antarctica. The shelf contains the sedimentary record of environmental and ice volume changes within the Aurora Subglacial Basin (ASB), which is presently occupied by ~7 m sea level-rise equivalent of ice. We acquired 750 km of high-resolution seismic data proximal to the Reynolds Trough and Moscow University Ice Shelf glacial systems west of the Dalton Ice Tongue using dual 45/45 cu. in. G.I. guns and a 24 ch. streamer with 3.125 m groups providing a vertical resolution of ~3 m simultaneously with CHIRP data. These are the first images of this margin acquired and show a remarkable set of sequence stratigraphic transitions. Crystalline basement is at the seafloor landward and buried seaward with a transition to smoother reflection interface. Reflective sedimentary strata overlie the basement, dip seaward, and are capped by a landward-dipping regional angular unconformity. Above this are a series of transparent seismic facies that, along with the middle to outer shelf seafloor, dip landward towards a shelf-oblique glacial trough. The older, seaward-dipping strata include a deeper series of units that display at least three stratal architectures interpreted to be shelf deltas implying a pre-glacial, fluvial environment within the drainage basin. Above these sequences, the seismic facies transition to surfaces exhibiting significant erosion, small u-shaped valleys, and channel fill sequences, all of which are reminiscent of temperate glacial features. We interpret these sequences as including sub-ice tunnel valleys and grounding zone wedges with interspersed non-glacial to pro-glacial deposits. Increasing glaciogenic facies upsection suggests a gradual fluvial to glacial transition and increasing glacial extent with time. The subsequent transition to ice sheets is marked by erosion to basement landward and the angular unconformity seaward

The global extent and determinants of savanna and forest as alternative biome states.

Science.gov (United States)

Staver, A Carla; Archibald, Sally; Levin, Simon A

2011-10-14

Theoretically, fire-tree cover feedbacks can maintain savanna and forest as alternative stable states. However, the global extent of fire-driven discontinuities in tree cover is unknown, especially accounting for seasonality and soils. We use tree cover, climate, fire, and soils data sets to show that tree cover is globally discontinuous. Climate influences tree cover globally but, at intermediate rainfall (1000 to 2500 millimeters) with mild seasonality (less than 7 months), tree cover is bimodal, and only fire differentiates between savanna and forest. These may be alternative states over large areas, including parts of Amazonia and the Congo. Changes in biome distributions, whether at the cost of savanna (due to fragmentation) or forest (due to climate), will be neither smooth nor easily reversible.

Tundra biome research in Alaska: the structure and function of cold-dominated ecosystems

Energy Technology Data Exchange (ETDEWEB)

Brown, J.; West, G.C.

1970-11-01

The objective of the Tundra Biome Program is to acquire a basic understanding of tundra, both alpine and arctic, and taiga. Collectively these are referred to as the cold-dominated ecosystems. The program's broad objectives are threefold: To develop a predictive understanding of how the wet arctic tundra ecosystem operates, particularly as exemplified in the Barrow, Alaska, area; to obtain the necessary data base from the variety of cold-dominated ecosystem types represented in the United States, so that their behavior can be modeled and simulated, and the results compared with similar studies underway in other circumpolar countries; to bring basic environmental knowledge to bear on problems of degradation, maintenance, and restoration of the temperature-sensitive and cold-dominated tundra/taiga ecosystems. (GRA)

Classification and multivariate analysis of differences in gross primary production at different elevations using biome-bgc in the páramos, ecuadorian andean region

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Veronica Minaya

2015-08-01

Full Text Available Gross primary production (GPP in climate change studies with multi- species and elevation variables are difficult to measure and simulate. Models tend to provide a representation of dynamic process through long-term analysis by using generalized parameterizations. Even, current approaches of modelling do not contemplate easily the variation of GPP at different elevations for different vegetation types in regions like páramos, mainly due to data unavailability. In these models information from cells is commonly averaged, and therefore average elevation, ecophysiology of vegetation, as well as other parameters is generalized. The vegetation model BIOME- BGC was applied to the Ecuadorian Andean region for elevations greater than 4000 masl with the presence of typical vegetation of páramo for 10 years of simulation (period 2000-2009. An estimation of the difference of GPP obtained using a generalized altitude and predominant type of vegetation could lead to a better estimation of the uncertainty in the magnitude of the errors in global climate models. This research explores GPP from 3 different altitudes and 3 vegetation types against 2 main climate drivers (Short Wave Radiation and Vapor Pressure Deficit. Since it is important to measure the possible errors or difference in the use of averaged meteorological and ecophysiological data, here we present a multivariate analysis of the dynamic difference of GPP in time, relative to an altitude and type of vegetation. A copula multivariable model allows us to identify and classify the changes in GPP per type of vegetation and altitude. The Frank copula model of joint distributions was our best fit between GPP and climate drivers and it allowed us to understand better the dependency of the variables. These results can explore extreme situations where averaged simplified approaches could mislead. The change of GPP over time is essential for future climate scenarios of the ecosystem storage and release

Modeling of Carbon Sequestration on Eucalyptus Plantation in Brazililian Cerrado Region for Better Characterization of Net Primary Productivity

Science.gov (United States)

Echeverri, J. D.; Siqueira, M. B.

2013-05-01

Managed Forests have important roles in climate change due to their contribution to CO2 sequestration stored in their biomass, soils and products therefrom. Terrestrial net primary production (NPP, kgC/m2), equal to gross primary production minus autotrophic respiration, represents the carbon available for plant allocation to leaves, stems, roots, defensive compounds, and reproduction and is the basic measure of biological productivity. Tree growth, food production, fossil fuel production, and atmospheric CO2 levels are all strongly controlled by NPP. Accurate quantification of NPP at local to global scales is therefore central topic for carbon cycle researchers, foresters, land and resource managers, and politicians. For recent or current NPP estimates, satellite remote sensing can be used but for future climate scenarios, simulation models are required. There is an increasing trend to displace natural Brazilian Cerrado to Eucalyptus for paper mills and energy conversion from biomass. The objective of this research exercise is to characterize NPP from managed Eucalyptus plantation in the Brazilian Cerrado. The models selected for this study were the 3-PG and Biome-BGC. The selection of these models aims to cover a range of complexity that allow the evaluation of the processes modeled as to its relevance to a best estimate of productivity in eucalyptus forests. 3-PG model is the simplest of the models chosen for this exercise. Its main purpose is to estimate productivity of forests in timber production. The model uses the relationship of quantum efficiency in the transformation of light energy into biomass for vegetative growth calculations in steps in time of one month. Adverse weather conditions are treated with reduction factors applied in the top efficiency. The second model is the Biome-BGC that uses biology and geochemistry principles to estimate leaf-level photosynthesis based on limiting factors such as availability of light and nutrient constraints. The

Pre-Launch Tasks Proposed in our Contract of December 1991

Science.gov (United States)

1998-01-01

We propose, during the pre-EOS phase to: (1) develop, with other MODIS Team Members, a means of discriminating different major biome types with NDVI and other AVHRR-based data; (2) develop a simple ecosystem process model for each of these biomes, BIOME-BGC; (3) relate the seasonal trend of weekly composite NDVI to vegetation phenology and temperature limits to develop a satellite defined growing season for vegetation; and (4) define physiologically based energy to mass conversion factors for carbon and water for each biome. Our final core at-launch product will be simplified, completely satellite driven biome specific models for net primary production. We will build these biome specific satellite driven algorithms using a family of simple ecosystem process models as calibration models, collectively called BIOME-BGC, and establish coordination with an existing network of ecological study sites in order to test and validate these products. Field datasets will then be available for both BIOME-BGC development and testing, use for algorithm developments of other MODIS Team Members, and ultimately be our first test point for MODIS land vegetation products upon launch. We will use field sites from the National Science Foundation Long-Term Ecological Research network, and develop Glacier National Park as a major site for intensive validation.

Production, purification and oxidative folding of the mouse recombinant prion protein

Czech Academy of Sciences Publication Activity Database

Pavlíček, A.; Bednárová, Lucie; Holada, K.

2007-01-01

Roč. 52, č. 4 (2007), s. 391-397 ISSN 0015-5632 R&D Projects: GA ČR GD310/05/H533 Grant - others:GA ČR(CZ) GA310/04/0419 Institutional research plan: CEZ:AV0Z40550506 Keywords : recombinant prion protein * production * purification * folding Subject RIV: CE - Biochemistry Impact factor: 0.989, year: 2007 http://www.biomed.cas.cz/mbu/folia/

Woodland expansion in South African grassy biomes based on satellite observations (1990-2013): general patterns and potential drivers.

Science.gov (United States)

Skowno, Andrew L; Thompson, Mark W; Hiestermann, Jens; Ripley, Brad; West, Adam G; Bond, William J

2017-06-01

Increases in woody plant cover in savanna grassland environments have been reported on globally for over 50 years and are generally perceived as a threat to rangeland productivity and biodiversity. Despite this, few attempts have been made to estimate the extent of woodland increase at a national scale, principally due to technical constraints such as availability of appropriate remote sensing products. In this study, we aimed to measure the extent to which woodlands have replaced grasslands in South Africa's grassy biomes. We use multiseason Landsat data in conjunction with satellite L-band radar backscatter data to estimate the extent of woodlands and grasslands in 1990 and 2013. The method employed allows for a unique, nationwide measurement of transitions between grassland and woodland classes in recent decades. We estimate that during the 23-year study period, woodlands have replaced grasslands over ~57 000 km 2 and conversely that grasslands have replaced woodlands over ~30 000 km 2 , a net increase in the extent of woodland of ~27 000 km 2 and an annual increase of 0.22%. The changes varied markedly across the country; areas receiving over 500 mm mean annual precipitation showed higher rates of woodland expansion than regions receiving 0.19% yr -1 ). The woodland change map presented here provides a unique opportunity to test the numerous models of woody plant encroachment at a national/regional scale. © 2016 John Wiley & Sons Ltd.

Modeling transient luminous events produced by cloud to ground lightning and narrow bipolar pulses: detailed spectra and chemical impact

Science.gov (United States)

Perez-Invernon, F. J.; Luque, A.; Gordillo-Vazquez, F. J.

2017-12-01

The electromagnetic field generated by lightning discharges can produce Transient Luminous Events (TLEs) in the lower ionosphere, as previously investigated by many authors. Some recent studies suggest that narrow bipolar pulses (NBP), an impulsive and not well-established type of atmospheric electrical discharge, could also produce TLEs. The characterization and observation of such TLEs could be a source of information about the physics underlying NBP. In this work, we develop two different electrodynamical models to study the impact of lightning-driven electromagnetic fields in the lower ionosphere. The first model calculates the quasi-electrostatic field produced by a single cloud to ground lightning in the terrestrial atmosphere and its influence in the electron transport. This scheme allows us to study halos, a relatively frequent type of TLE. The second model solves the Maxwell equations for the electromagnetic field produced by a lightning discharge coupled with the Langevin's equation for the induced currents in the ionosphere. This model is useful to investigate elves, a fast TLE produced by lightning or by NBP. In addition, both models are coupled with a detailed chemistry of the electronically and vibrationally excited states of molecular nitrogen, allowing us to calculate synthetic spectra of both halos and elves. The models also include a detailed set of kinetic reactions to calculate the temporal evolution of other species. Our results suggest an important enhancement of some molecular species produced by halos, as NOx , N2 O and other metastable species. The quantification of their production could be useful to understand the role of thunderstorms in the climate of our planet. In the case of TLEs produced by NBP, our model confirms the appearance of double elves and allows us to compute their spectral characteristics.

Mutual augmentation of the induction of the histamine-forming enzyme, histidine decarboxylase, between alendronate and immuno-stimulants (IL-1, TNF, and LPS), and its prevention by clodronate

International Nuclear Information System (INIS)

Deng Xue; Yu Zhiqian; Funayama, Hiromi; Shoji, Noriaki; Sasano, Takashi; Iwakura, Yoichiro; Sugawara, Shunji; Endo, Yasuo

2006-01-01

Nitrogen-containing bisphosphonates (N-BPs), powerful anti-bone-resorptive drugs, have inflammatory side effects, while histamine is not only an inflammatory mediator, but also an immuno-modifier. In murine models, a single intraperitoneal injection of an N-BP induces various inflammatory reactions, including the induction of the histamine-forming enzyme histidine decarboxylase (HDC) in tissues important in immune responses (such as liver, lungs, spleen, and bone marrow). Lipopolysaccharide (LPS) and the proinflammatory cytokines IL-1 and TNF are also capable of inducing HDC. We reported previously that in mice (i) the inflammatory actions of N-BPs depend on IL-1 (ii) N-BP pretreatment augments both LPS-stimulated IL-1 production and HDC induction, and (iii) the co-administration of clodronate (a non-N-BP) with an N-BP inhibits the latter's inflammatory actions (including HDC induction). Here, we add the new findings that (a) pretreatment with alendronate (a typical N-BP) augments both IL-1- and TNF-induced HDC elevations, (b) LPS pretreatment augments the alendronate-induced HDC elevation, (c) co-administration of clodronate with alendronate abolishes these augmentations, (d) alendronate does not induce HDC in IL-1-deficient mice even if they are pretreated with LPS, and (e) alendronate increases IL-1β in all tissues tested, but not in the serum. These results suggest that (1) there are mutual augmentations between alendronate and immuno-stimulants (IL-1, TNF, and LPS) in HDC induction, (2) tissue IL-1β is important in alendronate-stimulated HDC induction, and (3) combination use of clodronate may have the potential to reduce the inflammatory effects of alendronate (we previously found that clodronate, conveniently, does not inhibit the anti-bone-resorptive activity of alendronate)

[Responses of Pinus tabulaeformis forest ecosystem in North China to climate change and elevated CO2: a simulation based on BIOME-BGC model and tree-ring data].

Science.gov (United States)

He, Jun-Jie; Peng, Xing-Yuan; Chen, Zhen-Ju; Cui, Ming-Xing; Zhang, Xian-Liang; Zhou, Chang-Hong

2012-07-01

Based on BIOME-BGC model and tree-ring data, a modeling study was conducted to estimate the dynamic changes of the net primary productivity (NPP) of Pinus tabulaeformis forest ecosystem in North China in 1952-2008, and explore the responses of the radial growth and NPP to regional climate warming as well as the dynamics of the NPP in the future climate change scenarios. The simulation results indicated the annual NPP of the P. tabulaeformis ecosystem in 1952-2008 fluctuated from 244.12 to 645.31 g C x m(-2) x a(-1), with a mean value of 418.6 g C x m(-2) x a(-1) The mean air temperature in May-June and the precipitation from previous August to current July were the main factors limiting the radial growth of P. tabulaeformis and the NPP of P. tabulaeformis ecosystem. In the study period, both the radial growth and the NPP presented a decreasing trend due to the regional warming and drying climate condition. In the future climate scenarios, the NPP would have positive responses to the increase of air temperature, precipitation, and their combination. The elevated CO2 would benefit the increase of the NPP, and the increment would be about 16.1% due to the CO2 fertilization. At both ecosystem and regional scales, the tree-ring data would be an ideal proxy to predict the ecosystem dynamic change, and could be used to validate and calibrate the process-based ecosystem models including BIOME-BGC.

Impacto de la inclusión de artículos escritos en inglés en revistas biomédicas españolas de edición multilingüe

OpenAIRE

R. Cremades Pallas; P. Burbano; M.A. Valcárcel de La Iglesia; G. Burillo-Putze; F.J. Martín-Sánchez; Ò. Miró

2013-01-01

Objetivos: Analizar el impacto que tienen los artículos publicados en inglés, en comparación con los publicados en castellano, por revistas biomédicas españolas de edición multilingüe. Metodología: De los artículos publicados entre 2008-2012 en 5 revistas españolas biomédicas multilingües, se analizó el idioma, el número de originales, la nacionalidad de la autoría, las citas recibidas, los artículos citantes y la nacionalidad de los autores citantes. Resultados: Se incluyeron 4.296 documento...

Identification of beef production farms in the Pampas and Campos area that stand out in economic and environmental performance

NARCIS (Netherlands)

Modernel, P.; Dogliotti, S.; Alvarez, S.; Corbeels, M.; Picasso, V.; Tittonell, P.; Rossing, W.A.H.

2018-01-01

Worldwide, native grasslands are being converted to non-native pastures and cropland. This process threatens local grassland biomes as well as the livelihoods of farm families that utilize these grasslands. In the Río de la Plata grasslands region meat production and multispecies native grasslands

Mother-Child Relationship Quality and Effective Discipline as Mediators of the 6-Year Effects of the New Beginnings Program for Children from Divorced Families

Science.gov (United States)

Zhou, Qing; Sandler, Irwin N.; Millsap, Roger E.; Wolchik, Sharlene A.; Dawson-McClure, Spring R.

2008-01-01

This study examines whether program effects on mother-child relationship quality and effective discipline mediated the 6-year longitudinal effects of the New Beginnings Program (NBP) to improve mental health and competence outcomes in 218 adolescents from divorced families in a randomized experimental trial. The NBP is a theory-based and…

Análisis bibliométrico de las publicaciones sobre síndrome metabólico en dos revistas biomédicas colombianas de alto impacto

Directory of Open Access Journals (Sweden)

María Alejandra Recio

2017-06-01

Full Text Available Objetivo: Realizar un análisis bibliométrico de las publicaciones sobre síndrome metabólico (SM en las dos revistas biomédicas colombianas de mayor impacto. Materiales y métodos: Estudio descriptivo documental que realizó un análisis bibliométrico de las publicaciones sobre SM en las revistas Biomédica y Colombia Médica. Para el análisis se emplearon indicadores bibliométricos (tipo de artículo, año de publicación, información de los autores, universidad, tipo de universidad, ciudad, país, área temática y financiamiento obtenidos de los artículos. Resultados: Se encontraron un total de 108 artículos (76 en Biomédica y 32 en Colombia Médica que cumplieron con los criterios de inclusión y que fueron publicados entre 1983 y 2016 (mes de marzo. Se identificaron 80 artículos originales derivados de investigación. El 57,4% de los artículos son de instituciones públicas de los sectores de educación y salud. Los artículos con procedencia colombiana son de Bogotá (21,7%, Cali (19,1% y Medellín (14,8%. El contenido científico de los artículos fue hipertensión secundaria (31,3%, diabetes mellitus tipo II (28,7% y obesidad (22,6%. El 56,5% de los artículos pertenece proyectos de investigación financiados por convocatorias internas (20,9%, Colciencias (12,2% y recursos propios de los investigadores (7,0%. Conclusiones: El análisis bibliométrico de las dos revistas biomédicas colombianas de mayor impacto evidencia que el número de publicaciones sobre SM ha aumentado en los últimos ocho años, coherente con el plan de desarrollo nacional en términos de las dimensiones prioritarias en salud pública, los problemas prioritarios en salud y las prioridades de investigación en salud.

The biogeographic origin of a radiation of trees in Madagascar: implications for the assembly of a tropical forest biome.

Science.gov (United States)

Federman, Sarah; Dornburg, Alex; Downie, Alexander; Richard, Alison F; Daly, Douglas C; Donoghue, Michael J

2015-10-05

Madagascar's rain forests are characterized by extreme and uneven patterns of species richness and endemicity, the biogeographic and evolutionary origins of which are poorly understood. Here we use a time-calibrated phylogeny of a dominant group of trees in Madagascar's eastern rain forests, Canarium, and related Burseraceae (Canarieae), to test biogeographic hypotheses regarding the origin and radiation of the flora of this unique biome. Our findings strongly support the monophyly of Malagasy Canarium, suggesting that this clade represents a previously undocumented in situ radiation. Contrary to expectations of dispersal from Africa during the Oligocene, concurrent with the formation of Madagascar's rain forest biome, our analyses support a late Miocene origin for Malagasy Canarium, probably by long distance dispersal from Southeast Asia. Our study illustrates the importance of considering long distance dispersal as a viable explanation for clades with pantropical distributions diversifying subsequent to the Oligocene, and it highlights the formation of the Indo-Australian Archipelago and associated fast-moving equatorial surface currents, suggesting an under-appreciated evolutionary link among tropical centers of endemism. We postulate that the relatively recent establishment and radiation of Canarium in Madagascar may have been facilitated by the highly stochastic climates associated with these forest ecosystems.

Optimized estimation and its uncertainties of gross primary production over oasis-desert ecosystems in an arid region of China

Science.gov (United States)

Wang, H.; Li, X.; Xiao, J.; Ma, M.

2017-12-01

Arid and semi-arid ecosystems cover more than one-third of the Earth's land surface, it is of great important to the global carbon cycle. However, the magnitude of carbon sequestration and its contribution to global atmospheric carbon cycle is poorly understood due to the worldwide paucity of measurements of carbon exchange in the arid ecosystems. Accurate and continuous monitoring the production of arid ecosystem is of great importance for regional carbon cycle estimation. The MOD17A2 product provides high frequency observations of terrestrial Gross Primary Productivity (GPP) over the world. Although there have been plenty of studies to validate the MODIS GPP products with ground based measurements over a range of biome types, few have comprehensively validated the performance of MODIS estimates in arid and semi-arid ecosystems. Thus, this study examined the performance of the MODIS-derived GPP comparing with the EC observed GPP at different timescales for the main arid ecosystems in the arid and semi-arid ecosystems in China, and optimized the performance of the MODIS GPP calculations by using the in-situ metrological forcing data, and optimization of biome-specific parameters with the Bayesian approach. Our result revealed that the MOD17 algorithm could capture the broad trends of GPP at 8-day time scales for all investigated sites on the whole. However, the GPP product was underestimated in most ecosystems in the arid region, especially the irrigated cropland and forest ecosystems, while the desert ecosystem was overestimated in the arid region. On the annual time scale, the best performance was observed in grassland and cropland, followed by forest and desert ecosystems. On the 8-day timescale, the RMSE between MOD17 products and in-situ flux observations of all sites was 2.22 gC/m2/d, and R2 was 0.69. By using the in-situ metrological data driven, optimizing the biome-based parameters of the algorithm, we improved the performances of the MODIS GPP calculation

Ecosystem-scale carbon monoxide exchange and partitioning across major biomes in Europe

Science.gov (United States)

Hammerle, Albin; Spielmann, Felix; Kitz, Florian; Ibrom, Andreas; Migliavacca, Mirco; Noe, Steffen; Kolle, Olaf; Moreno, Gerardo; Wohlfahrt, Georg

2017-04-01

With an average mole fraction of 100 ppb carbon monoxide (CO) plays a critical role in atmospheric chemistry and has an indirect global warming potential. While sources/sinks of CO on land at least partially cancel out each other and their magnitude is very likely lower compared to other sinks and sources, the magnitude of CO sources and sinks is highly uncertain. Thus it may be premature to neglect any direct contributions of land ecosystems to the CO budget. In addition, changes in global climate and resulting changes in global productivity may require re-evaluating older data and assumptions. One major reason for the large uncertainty is a general scarcity of empirical data. Here we present data on continuous eddy covariance measurements of CO-fluxes above different biomes in Europe in combination with soil-chamber flux measurements. Eddy covariance and soil-chamber measurements were conducted during the vegetation periods in 2015 and 2016 at a temperate grassland (AUT), a Mediterranean savanna (ESP), a temperate mixed deciduous (DEN) and a hemi-boreal forest (EST). While a clear diel pattern in ecosystem-scale CO-fluxes could be observed at the two grassland sites, with comparatively high emission rates at daytime conditions and fluxes around zero at night, no such pattern could be found for the two forest sites. Soil-chamber measurements mimicked the ecosystem-scale fluxes with CO-emissions during the day at the grassland ecosystems and slightly negative fluxes at night. Applying different treatments the influence of radiation and the availability of litter on these fluxes could be shown. Furthermore, a two-month rainout experiment revealed hardly any differences in CO soil fluxes between rainout- and control-plots at the grassland site (AUT), unless extremely dry conditions were reached.

Sarchophagid flies (Insecta, Diptera from pig carcasses in Minas Gerais, Brazil, with nine new records from the Cerrado, a threatened Neotropical biome

Directory of Open Access Journals (Sweden)

Cátia A. Mello-Patiu

2014-06-01

Full Text Available Sarchophagid flies (Insecta, Diptera from pig carcasses in Minas Gerais, Brazil, with nine new records from the Cerrado, a threatened Neotropical biome. The diversity of the Sarcophagidae fauna of the Cerrado biome, also know as the Brazilian Savanna, is still underestimated. In this research we collected flies in the state of Minas Gerais, Brazil, during a Forensic Entomology experiment. Samples were collected throughout the decomposition process of domestic pig (Sus scrofa Linnaeus carcasses, and the experiments were conducted in areas of pasture and semideciduous forest. A total of 85,694 adult flesh flies belonging to 57 species were collected from all carcasses. New records for nine species of Sarcophaginae are provided, including the first record of Blaesoxipha (Acridiophaga caridei (Brèthes, 1906 to Brazil, and new occurrences of the following species for the Cerrado and/or for the state of Minas Gerais: Blaesoxipha (Acanthodotheca acridiophagoides (Lopes & Downs, 1951, Malacophagomyia filamenta (Dodge, 1964, Nephochaetopteryx orbitalis (Curran & Walley, 1934, Nephochaetopteryx cyaneiventris Lopes, 1936, Nephochaetopteryx pallidiventris Townsend, 1934, Oxysarcodexia occulta Lopes, 1946, Ravinia effrenata (Walker, 1861 and Sarcophaga (Neobellieria polistensis (Hall, 1933.

Simulations and Analysis of Net Primary Productivity in Quercus liaotungensis Forest of Donglingshan Mountain Range in Response to Different Climate Change Scenarios%辽东栎林净初级生产力对气候变化情景响应的模拟与分析

Institute of Scientific and Technical Information of China (English)

苏宏新; 桑卫国

2004-01-01

An ecosystem process model, BIOME-BGC, was used to explore the sensitivity of net primary productivity (NPP) of an oak (Quercus liaotungensis Koidz) forest ecosystem in Beijing area to global climate changes caused by increasing atmospheric CO2 concentrations. Firstly we tested the model, and validated the modeled outputs using observational data; the outputs of BIOME-BGC model were consistent with observed soil water content and annual NPP. Secondly the potential impacts of climate change on the oak forest ecosystem were predicted with BIOME-BGC model. We found that the simulated NPP was much more sensitive to a 20% precipitation increase or a doubling of atmospheric CO2 from 355 to 710 μmol/mol than to a 2 ℃ temperature increase. Our results also indicated that the effects of elevated CO2 and climate change on the response of NPP were not interactive.%利用生态系统模型BIOME-BGC模拟北京东灵山地区辽东栎(Suercus liaotungensis Koidz)林生态系统净初级生产力(net primary productivity,NPP)对全球气候变化潜在响应.首先,BIOME-BGC模型模拟的土壤含水量和NPP与该地区实际测量结果、其他模型模拟研究进行比较分析,结果显示BIOME-BGC能较好的模拟辽东栎林生态系统净生产力.然后,利用BIOME-BGC模拟辽东栎林生态系统NPP对不同气候变化的响应.结果表明:(1)NPP对温度变化不敏感,而对降水和CO2变化极为敏感;(2)温度、降水和CO2对NPP的影响并没有显示出交互作用.

First parasitological, histopathological and molecular characterization of Echinococcus vogeli Rausch and Bernstein, 1972 from Cuniculus paca Linnaeus, 1766 in the Cerrado biome (Mato Grosso do Sul, Brazil).

Science.gov (United States)

Bittencourt-Oliveira, Fernanda; Teixeira, Paulo; Alencar, Alba; Menezes, Rodrigo; Corrêa, Christiane; Neves, Leandro; Almeida, Fernanda; Daipert-Garcia, Daniel; Machado-Silva, José Roberto; Rodrigues-Silva, Rosângela

2018-01-30

Polycystic echinococcosis (PE) is caused by Echinococcus vogeli metacestodes (larval stage) in Neotropical countries. E. vogeli is trophically-transmitted between predators bush dogs (Speothos venaticus) and prey pacas (Cuniculus paca). In Brazil, reported PE cases are restricted to the Amazon biome. In this study, metacestodes from a paca hunted in Mato Grosso do Sul state (Cerrado biome) were identified morphological and histopathological techniques and further confirmed by molecular testing (sequencing of cytochrome C oxidase subunit I (cox1) gene) for the first time. Images of the whole liver showed superficial bubble-like hepatic masses. The parasitological analysis revealed large hooks (41.3 ± 1.2 μm length/12.8 ± 0.8 μm width) and small hooks (33.0 ± 1.5 μm length/11.1 ± 1.2 μm width), consistent with E. vogeli. Microscopically, the liver showed protoscoleces, a thick laminated layer, fibrosis, and inflammatory infiltrate in the adventitial layer. The DNA sequencing confirmed E. vogeli with 99% homology with sequences deposited in the GenBank. In addition, this finding greatly extends the geographic range of animal polycystic echinococcosis into the Cerrado. It is likely to occur in new biomes, where bush dogs and pacas share a given area in a trophic relationship. Copyright © 2017 Elsevier B.V. All rights reserved.

Estimating climate change effects on net primary production of rangelands in the United States

Science.gov (United States)

Matthew C. Reeves; Adam L. Moreno; Karen E. Bagne; Steven W. Running

2014-01-01

The potential effects of climate change on net primary productivity (NPP) of U.S. rangelands were evaluated using estimated climate regimes from the A1B, A2 and B2 global change scenarios imposed on the biogeochemical cycling model, Biome-BGC from 2001 to 2100. Temperature, precipitation, vapor pressure deficit, day length, solar radiation, CO2 enrichment and nitrogen...

Biodigester User Survey 2009-2010. Draft report

Energy Technology Data Exchange (ETDEWEB)

Van Mansvelt, R.

2011-02-15

The Ministry of Agriculture, Forestry and Fisheries of the Kingdom of Cambodia (MAFF) and The Netherlands Development Organisation (SNV-Cambodia) have agreed on cooperating in the set-up and implementation of a National Biogas Programme. The programme officially started after the launching ceremony in March 2006. The objective the National Biodigester Programme (NBP) is 'The dissemination of domestic biodigesters as an indigenous, sustainable energy source through the development of a commercial, market oriented, biodigester sector in selected provinces of Cambodia'. To evaluate the effectiveness of the NBP a Biodigester User Survey has been undertaken with two specific objectives, being: (1) To evaluate the effect of domestic biodigester installations, as perceived by the user, by conducting a representative quantitative random survey of 120 households constructed till 31/08/2010 under the NBP in 8 provinces in Cambodia as well as how the users have experienced the programme activities such as promotion, construction, quality assurance, training and after-sales service; and (2) To evaluate the impact of the program on sustainable development and on a number of GHG emission causing activities, such as fossil and fuel wood consumption and manure management practices. The results of which are presented in this report. Since the beginning of 2006 the National Biodigester Programme (NBP) has supported the construction of over 8,000 biodigesters by July 2010. This Biodigester User Survey (BUS) aimed to evaluate the effect of domestic biodigester installations by conducting research with selected representatives to obtain a sample with a confidence level of 95%. The sample size was 120 with a two-step random selection, the selection was made from households in the NBP database. First, 12 out of 82 districts with were randomly selected, and secondly 120 households were randomly selected from these 12 districts, which cover 7 of the 8 provinces in which NBP supported the

Biodigester User Survey 2009-2010. Draft report

Energy Technology Data Exchange (ETDEWEB)

Van Mansvelt, R.

2011-02-15

The Ministry of Agriculture, Forestry and Fisheries of the Kingdom of Cambodia (MAFF) and The Netherlands Development Organisation (SNV-Cambodia) have agreed on cooperating in the set-up and implementation of a National Biogas Programme. The programme officially started after the launching ceremony in March 2006. The objective the National Biodigester Programme (NBP) is 'The dissemination of domestic biodigesters as an indigenous, sustainable energy source through the development of a commercial, market oriented, biodigester sector in selected provinces of Cambodia'. To evaluate the effectiveness of the NBP a Biodigester User Survey has been undertaken with two specific objectives, being: (1) To evaluate the effect of domestic biodigester installations, as perceived by the user, by conducting a representative quantitative random survey of 120 households constructed till 31/08/2010 under the NBP in 8 provinces in Cambodia as well as how the users have experienced the programme activities such as promotion, construction, quality assurance, training and after-sales service; and (2) To evaluate the impact of the program on sustainable development and on a number of GHG emission causing activities, such as fossil and fuel wood consumption and manure management practices. The results of which are presented in this report. Since the beginning of 2006 the National Biodigester Programme (NBP) has supported the construction of over 8,000 biodigesters by July 2010. This Biodigester User Survey (BUS) aimed to evaluate the effect of domestic biodigester installations by conducting research with selected representatives to obtain a sample with a confidence level of 95%. The sample size was 120 with a two-step random selection, the selection was made from households in the NBP database. First, 12 out of 82 districts with were randomly selected, and secondly 120 households were randomly selected from these 12 districts, which cover 7 of the 8 provinces in which NBP

Climate control of terrestrial carbon exchange across biomes and continents

Energy Technology Data Exchange (ETDEWEB)

Yi Chuixiang; Wolbeck, John; Xu Xiyan [School of Earth and Environmental Sciences, Queens College, City University of New York, NY 11367 (United States); Ricciuto, Daniel [Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 (United States); Li Runze [Department of Statistics, Pennsylvania State University, University Park, PA 16802 (United States); Nilsson, Mats [Department of Forest Ecology, Swedish University of Agricultural Sciences, SE-901 83 Umeaa (Sweden); Aires, Luis [CESAM and Department of Environmental Engineering, School of Technology and Management, Polytechnic Institute of Leiria (Portugal); Albertson, John D [Department of Civil and Environmental Engineering, Duke University, Durham, NC 22708-0287 (United States); Ammann, Christof [Federal Research Station Agroscope Reckenholz-Taenikon, Reckenholzstrasse 191, 8046 Zuerich (Switzerland); Arain, M Altaf [School of Geography and Earth Sciences, McMaster University, Hamilton, ON, L8S 4K1 (Canada); De Araujo, Alessandro C [Instituto Nacional de Pesquisas da Amazonia, Programa LBA, Campus-II, Manaus-Amazonas 69060 (Brazil); Aubinet, Marc [University of Liege, Gembloux Agro-Bio Tech, Unit of Biosystem Physics, 2 Passage des Deportes, 5030 Gembloux (Belgium); Aurela, Mika [Finnish Meteorological Institute, Climate Change Research, FI-00101 Helsinki (Finland); Barcza, Zoltan [Department of Meteorology, Eoetvoes Lorand University, H-1117 Budapest, Pazmany setany 1/A (Hungary); Barr, Alan [Climate Research Division, Environment Canada, Saskatoon, SK, S7N 3H5 (Canada); Berbigier, Paul [INRA, UR1263 EPHYSE, Villenave d' Ornon F-33883 (France); Beringer, Jason [School of Geography and Environmental Science, Monash University, Clayton, Victoria 3800 (Australia); Bernhofer, Christian [Institute of Hydrology and Meteorology, Dresden University of Technology, Pienner Strasse 23, D-01737, Tharandt (Germany)

2010-07-15

Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO{sub 2} exchange with the atmosphere across biomes and continents are lacking. Here we present data describing the relationships between net ecosystem exchange of carbon (NEE) and climate factors as measured using the eddy covariance method at 125 unique sites in various ecosystems over six continents with a total of 559 site-years. We find that NEE observed at eddy covariance sites is (1) a strong function of mean annual temperature at mid- and high-latitudes, (2) a strong function of dryness at mid- and low-latitudes, and (3) a function of both temperature and dryness around the mid-latitudinal belt (45 deg. N). The sensitivity of NEE to mean annual temperature breaks down at {approx} 16 deg. C (a threshold value of mean annual temperature), above which no further increase of CO{sub 2} uptake with temperature was observed and dryness influence overrules temperature influence.

Climate control of terrestrial carbon exchange across biomes and continents

International Nuclear Information System (INIS)

Yi Chuixiang; Wolbeck, John; Xu Xiyan; Ricciuto, Daniel; Li Runze; Nilsson, Mats; Aires, Luis; Albertson, John D; Ammann, Christof; Arain, M Altaf; De Araujo, Alessandro C; Aubinet, Marc; Aurela, Mika; Barcza, Zoltan; Barr, Alan; Berbigier, Paul; Beringer, Jason; Bernhofer, Christian

2010-01-01

Understanding the relationships between climate and carbon exchange by terrestrial ecosystems is critical to predict future levels of atmospheric carbon dioxide because of the potential accelerating effects of positive climate-carbon cycle feedbacks. However, directly observed relationships between climate and terrestrial CO 2 exchange with the atmosphere across biomes and continents are lacking. Here we present data describing the relationships between net ecosystem exchange of carbon (NEE) and climate factors as measured using the eddy covariance method at 125 unique sites in various ecosystems over six continents with a total of 559 site-years. We find that NEE observed at eddy covariance sites is (1) a strong function of mean annual temperature at mid- and high-latitudes, (2) a strong function of dryness at mid- and low-latitudes, and (3) a function of both temperature and dryness around the mid-latitudinal belt (45 deg. N). The sensitivity of NEE to mean annual temperature breaks down at ∼ 16 deg. C (a threshold value of mean annual temperature), above which no further increase of CO 2 uptake with temperature was observed and dryness influence overrules temperature influence.

A Comparative Study of Basic, Amphoteric, and Acidic Catalysts in the Oxidative Coupling of Methanol and Ethanol for Acrolein Production.

Science.gov (United States)

Lilić, Aleksandra; Wei, Tiantian; Bennici, Simona; Devaux, Jean-François; Dubois, Jean-Luc; Auroux, Aline

2017-09-11

The impact of acid/base properties (determined by adsorption microcalorimetry) of various catalysts on the cross-aldolization of acetaldehyde and formaldehyde leading to acrolein was methodically studied in oxidizing conditions starting from a mixture of methanol and ethanol. The aldol condensation and further dehydration to acrolein were carried out on catalysts presenting various acid/base properties (MgO, Mg-Al oxides, Mg/SiO 2 , NbP, and heteropolyanions on silica, HPA/SiO 2 ). Thermodynamic calculations revealed that cross-aldolization is always favored compared with self-aldolization of acetaldehyde, which leads to crotonaldehyde formation. The presence of strong basic sites is shown to be necessary, but a too high amount drastically increases CO x production. On strong acid sites, production of acrolein and carbon oxides (CO x ) does not increase with temperature. The optimal catalyst for this process should be amphoteric with a balanced acid/base cooperation of medium strength sites and a small amount (150 kJ mol -1 ). © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Primer Programa Universitario de diplomado virtual y Maestría en Informática Biomédica en el Perú

Directory of Open Access Journals (Sweden)

Patricia J García

Full Text Available El entrenamiento en Informática Biomédica es fundamental para enfrentar los desafíos de un mundo globalizado. Sin embargo, el desarrollo de programas de entrenamiento e investigación en posgrado en esta área son escasos en América Latina. A través del QUIPU: Centro Andino de Investigación y Entrenamiento en Informática para la Salud Global, se ha desarrollado el primer programa de Diplomado y Maestría en Informática Biomédica en la Región Andina. El objetivo de este artículo es describir la experiencia del programa. A la fecha han participado 51 alumnos de Perú, Chile, Ecuador, Colombia y Venezuela; procedentes de ministerios de salud, hospitales, universidades, centros de investigación, colegios profesionales y empresas privadas. Diecisiete cursos se impartieron con la participación presencial y virtual de profesores de Argentina, Chile, Colombia, Estados Unidos, México y Perú. Este programa está ya institucionalizado en la Facultad de Salud Pública y Administración de la Universidad Peruana Cayetano Heredia

AATSR land surface temperature product algorithm verification over a WATERMED site

Science.gov (United States)

Noyes, E. J.; Sòria, G.; Sobrino, J. A.; Remedios, J. J.; Llewellyn-Jones, D. T.; Corlett, G. K.

A new operational Land Surface Temperature (LST) product generated from data acquired by the Advanced Along-Track Scanning Radiometer (AATSR) provides the opportunity to measure LST on a global scale with a spatial resolution of 1 km2. The target accuracy of the product, which utilises nadir data from the AATSR thermal channels at 11 and 12 μm, is 2.5 K for daytime retrievals and 1.0 K at night. We present the results of an experiment where the performance of the algorithm has been assessed for one daytime and one night time overpass occurring over the WATERMED field site near Marrakech, Morocco, on 05 March 2003. Top of atmosphere (TOA) brightness temperatures (BTs) are simulated for 12 pixels from each overpass using a radiative transfer model, with the LST product and independent emissivity values and atmospheric data as inputs. We have estimated the error in the LST product over this biome for this set of conditions by applying the operational AATSR LST retrieval algorithm to the modelled BTs and comparing the results with the original AATSR LSTs input into the model. An average bias of -1.00 K (standard deviation 0.07 K) for the daytime data, and -1.74 K (standard deviation 0.02 K) for the night time data is obtained, which indicates that the algorithm is yielding an LST that is too cold under these conditions. While these results are within specification for daytime retrievals, this suggests that the target accuracy of 1.0 K at night is not being met within this biome.

Soil, water, and nutrient losses from management alternatives for degraded pasture in Brazilian Atlantic Rainforest biome.

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Rocha Junior, Paulo Roberto da; Andrade, Felipe Vaz; Mendonça, Eduardo de Sá; Donagemma, Guilherme Kangussú; Fernandes, Raphael Bragança Alves; Bhattharai, Rabin; Kalita, Prasanta Kumar

2017-04-01

The objective of this study was to evaluate sediment, water and nutrient losses from different pasture managements in the Atlantic Rainforest biome. A field study was carried out in Alegre Espiríto Santo, Brazil, on a Xanthic Ferralsol cultivated with braquiaria (Brachiaria brizantha). The six pasture managements studied were: control (CON), chisel (CHI), fertilizer (FER), burned (BUR), plowing and harrowing (PH), and integrated crop-livestock (iCL). Runoff and sediment samples were collected and analyzed for calcium (Ca), magnesium (Mg), potassium (K), phosphorus (P) and organic carbon contents. Soil physical attributes and above and below biomass were also evaluated. The results indicated that higher water loss was observed for iCL (129.90mm) and CON (123.25mm) managements, and the sediment losses were higher for CON (10.24tha -1 ) and BUR (5.20tha -1 ) managements when compared to the other managements. Majority of the nutrients losses occurred in dissolved fraction (99% of Ca, 99% of Mg, 96% of K, and 65% of P), whereas a significant fraction of organic carbon (80%) loss occurred in a particulate form. Except for P, other nutrients (Ca, Mg and K) and organic carbon losses were higher in coarse sediment compared to fine sediment. The greater losses of sediment, organic carbon, and nutrients were observed for CON followed by BUR management (plosses from various practices, to reduce pasture degradation, farmers should adopt edaphic practices by applying lime and fertilize to improve pasture growth and soil cover, and reducing soil erosion in the hilly Brazilian Atlantic Rainforest biome. Copyright © 2016. Published by Elsevier B.V.

Interpreting forest biome productivity and cover utilizing nested scales of image resolution and biogeographical analysis

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Iverson, Louis R.; Cook, Elizabeth A.; Graham, Robin L.; Olson, Jerry S.; Frank, Thomas D.; Ying, KE

1988-01-01

The objective was to relate spectral imagery of varying resolution with ground-based data on forest productivity and cover, and to create models to predict regional estimates of forest productivity and cover with a quantifiable degree of accuracy. A three stage approach was outlined. In the first stage, a model was developed relating forest cover or productivity to TM surface reflectance values (TM/FOREST models). The TM/FOREST models were more accurate when biogeographic information regarding the landscape was either used to stratigy the landscape into more homogeneous units or incorporated directly into the TM/FOREST model. In the second stage, AVHRR/FOREST models that predicted forest cover and productivity on the basis of AVHRR band values were developed. The AVHRR/FOREST models had statistical properties similar to or better than those of the TM/FOREST models. In the third stage, the regional predictions were compared with the independent U.S. Forest Service (USFS) data. To do this regional forest cover and forest productivity maps were created using AVHRR scenes and the AVHRR/FOREST models. From the maps the county values of forest productivity and cover were calculated. It is apparent that the landscape has a strong influence on the success of the approach. An approach of using nested scales of imagery in conjunction with ground-based data can be successful in generating regional estimates of variables that are functionally related to some variable a sensor can detect.

Interpreting forest and grassland biome productivity utilizing nested scales of image resolution and biogeographical analysis

Science.gov (United States)

Iverson, Louis R.; Cook, Elizabeth A.; Graham, Robin L.; Olson, Jerry S.; Frank, Thomas; Ke, Ying; Treworgy, Colin; Risser, Paul G.

1987-01-01

This report summarizes progress made in our investigation of forest productivity assessment using TM and other biogeographical data during the third six-month period of the grant. Data acquisition and methodology hurdles are largely complete. Four study areas for which the appropriate TM and ancillary data were available are currently being intensively analyzed. Significant relationships have been found on a site by site basis to suggest that forest productivity can be qualitatively assessed using TM band values and site characteristics. Perhaps the most promising results relate TM unsupervised classes to forest productivity, with enhancement from elevation data. During the final phases of the research, multi-temporal and regional comparisons of results will be addressed, as well as the predictability of forest productivity patterns over a large region using TM data and/or TM nested within AVHRR data.

Variance-based sensitivity analysis of BIOME-BGC for gross and net primary production

NARCIS (Netherlands)

Raj, R.; Hamm, N.A.S.; van der Tol, C.; Stein, A.

2014-01-01

Parameterization and calibration of a process-based simulator (PBS) is a major challenge when simulating gross and net primary production (GPP and NPP). The large number of parameters makes the calibration computationally expensive and is complicated by the dependence of several parameters on other

Future projections of fire danger in Brazilian biomes in the 21st century

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Libonati, Renata; Silva, Patrícia; DaCamara, Carlos; Bastos, Ana

2016-04-01

In the global context, Brazil is one of the regions more severely affected by fire occurrences, with important consequences in the global CO2 balance, the state of the Amazon forest and the ecological diversity of the region. Brazil is also one of the few regions experiencing a raise in annual mean temperature above 2.5o during the 20th century, which may further increase between 2o and 7o until 2100 and, likely, be accompanied by a decrease in precipitation [1]. As the fire occurrence and severity largely depends on these two variables, it is worth assessing the evolution of fire danger for the coming decades. In order to obtain a detailed characterization of the future fire patterns in the different biomes of Brazil, we use outputs from a regional-downscaling of the EC-Earth climate model at 0.44 degrees spatial resolution for two future scenarios, an intermediate (RCP4.5) and a more severe (RCP8.5) one. We use a fire danger index specifically developed for the Brazilian climate and biome characteristics, the IFR from INPE. This index relies on values of maximum temperature, accumulated precipitation over different periods, minimum relative humidity and vegetation cover to estimate the likelihood of fire occurrence. We find a systematic increase of the days with critical fire risk, which is more pronounced in RCP8.5 and mostly affects months when fire activity takes place. Temperature increase is the most determinant factor for the increase in fire danger in the dry regions of savannah and shrubland, a result to be expected as fuel is already very dry. [1] Collins, M., R. Knutti, J. Arblaster, J.-L. Dufresne, T. Fichefet, P. Friedlingstein, X. Gao, W.J. Gutowski, T. Johns, G. Krinner, M. Shongwe, C. Tebaldi, A.J. Weaver and M. Wehner, 2013: Long-term Climate Change: Projections, Commitments and Irreversibility. In: Climate Change 2013: The Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on

Pennsylvanian coniferopsid forests in sabkha facies reveal the nature of seasonal tropical biome

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Falcon-Lang, H. J.; Jud, N.A.; John, Nelson W.; DiMichele, W.A.; Chaney, D.S.; Lucas, S.G.

2011-01-01

Pennsylvanian fossil forests are known from hundreds of sites across tropical Pangea, but nearly all comprise remains of humid Coal Forests. Here we report a unique occurrence of seasonally dry vegetation, preserved in growth position along >5 km of strike, in the Pennsylvanian (early Kasimovian, Missourian) of New Mexico (United States). Analyses of stump anatomy, diameter, and spatial density, coupled with observations of vascular traces and associated megaflora, show that this was a deciduous, mixed-age, coniferopsid woodland (~100 trees per hectare) with an open canopy. The coniferopsids colonized coastal sabkha facies and show tree rings, confirming growth under seasonally dry conditions. Such woodlands probably served as the source of coniferopsids that replaced Coal Forests farther east in central Pangea during drier climate phases. Thus, the newly discovered woodland helps unravel biome-scale vegetation dynamics and allows calibration of climate models. ?? 2011 Geological Society of America.

长白山阔叶红松林净初级生产力对气候变化的响应:基于BIOME-BGC模型的分析%Response of Broad-Leaved Korean Pine Forest Productivity of Mt.Changbai to Climate Change: An Analysis Based on BIOME-BGC Modeling

Institute of Scientific and Technical Information of China (English)

吴玉莲; 王襄平; 李巧燕; 孙阎

2014-01-01

为了分析气候变化和大气CO2浓度增加对长白山阔叶红松林净初级生产力(NPP)的影响,运用本地参数化后的BIOME-BGC模型进行模拟,并以实测NPP和增强型植被指数(EVI)进行验证.模拟结果表明,长白山阔叶红松林NPP均值为611.71 gC/(m2·a),1960-2011年年际间的波动范围是473.28～703.44 gC/(m2·a).模拟结果与基于样地实测的NPP(均值为594.66 gC/(m2·a))相似;同时,BIOME-BGC模型模拟的NPP年际间变化趋势与EVI的波动趋势相似,二者间存在显著的相关关系,表明模型能较好地模拟生产力的时间动态.模拟表明,红松的NPP与降水关系更为密切,而阔叶树NPP与温度、降水都呈显著的正相关.模型预测,在未来CO2浓度加倍和温度、降水同时增加的场景下,长白山阔叶红松林NPP将显著增加,其中阔叶树和红松的NPP将分别增加27.87％和23.96％.单独增加温度(2℃)或单独增加降水(12％)都能促进阔叶树和红松NPP的增加,其中降水的作用弱于温度的作用,而单独CO2浓度的倍增对阔叶树和红松的NPP没有明显的影响.

Biome specificity of distinct genetic lineages within the four-striped mouse Rhabdomys pumilio (Rodentia: Muridae) from southern Africa with implications for taxonomy.

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du Toit, Nina; van Vuuren, Bettine Jansen; Matthee, Sonja; Matthee, Conrad A

2012-10-01

Within southern Africa, a link between past climatic changes and faunal diversification has been hypothesized for a diversity of taxa. To test the hypothesis that evolutionary divergences may be correlated to vegetation changes (induced by changes in climate), we selected the widely distributed four-striped mouse, Rhabdomys, as a model. Two species are currently recognized, the mesic-adapted R. dilectus and arid-adapted R. pumilio. However, the morphology-based taxonomy and the distribution boundaries of previously described subspecies remain poorly defined. The current study, which spans seven biomes, focuses on the spatial genetic structure of the arid-adapted R. pumilio (521 specimens from 31 localities), but also includes limited sampling of the mesic-adapted R. dilectus (33 specimens from 10 localities) to act as a reference for interspecific variation within the genus. The mitochondrial COI gene and four nuclear introns (Eef1a1, MGF, SPTBN1, Bfib7) were used for the construction of gene trees. Mitochondrial DNA analyses indicate that Rhabdomys consists of four reciprocally monophyletic, geographically structured clades, with three distinct lineages present within the arid-adapted R. pumilio. These monophyletic lineages differ by at least 7.9% (±0.3) and these results are partly confirmed by a multilocus network of the combined nuclear intron dataset. Ecological niche modeling in MaxEnt supports a strong correlation between regional biomes and the distribution of distinct evolutionary lineages of Rhabdomys. A Bayesian relaxed molecular clock suggests that the geographic clades diverged between 3.09 and 4.30Ma, supporting the hypothesis that the radiation within the genus coincides with paleoclimatic changes (and the establishment of the biomes) characterizing the Miocene-Pliocene boundary. Marked genetic divergence at the mitochondrial DNA level, coupled with strong nuclear and mtDNA signals of non-monophyly of R. pumilio, support the notion that a taxonomic

A dated phylogeny and collection records reveal repeated biome shifts in the African genus Coccinia (Cucurbitaceae).

Science.gov (United States)

Holstein, Norbert; Renner, Susanne S

2011-01-26

Conservatism in climatic tolerance may limit geographic range expansion and should enhance the effects of habitat fragmentation on population subdivision. Here we study the effects of historical climate change, and the associated habitat fragmentation, on diversification in the mostly sub-Saharan cucurbit genus Coccinia, which has 27 species in a broad range of biota from semi-arid habitats to mist forests. Species limits were inferred from morphology, and nuclear and plastid DNA sequence data, using multiple individuals for the widespread species. Climatic tolerances were assessed from the occurrences of 1189 geo-referenced collections and WorldClim variables. Nuclear and plastid gene trees included 35 or 65 accessions, representing up to 25 species. The data revealed four species groups, one in southern Africa, one in Central and West African rain forest, one widespread but absent from Central and West African rain forest, and one that occurs from East Africa to southern Africa. A few individuals are differently placed in the plastid and nuclear (LFY) trees or contain two ITS sequence types, indicating hybridization. A molecular clock suggests that the diversification of Coccinia began about 6.9 Ma ago, with most of the extant species diversity dating to the Pliocene. Ancestral biome reconstruction reveals six switches between semi-arid habitats, woodland, and forest, and members of several species pairs differ significantly in their tolerance of different precipitation regimes. The most surprising findings of this study are the frequent biome shifts (in a relatively small clade) over just 6 - 7 million years and the limited diversification during and since the Pleistocene. Pleistocene climate oscillations may have been too rapid or too shallow for full reproductive barriers to develop among fragmented populations of Coccinia, which would explain the apparently still ongoing hybridization between certain species. Steeper ecological gradients in East Africa and

Monetary policy change of the Central bank of Poland

Directory of Open Access Journals (Sweden)

Kraś Ireneusz

2015-07-01

Full Text Available The National Bank of Poland is an institution which, in conjunction with the government is responsible for the implementation of country’s economic policy reinforces its democratic character. Provisions of its operation are governed by the Constitution of The Republic of Poland and by the Act on the National Bank of Poland. To this end, the objective of the present research is to analyse the proposed amendments in the Act on the NBP. The latter concerns the amendment procedures, term of office and the rotations and numbers of Monetary Policy Council. The remaining part of the analyses is dedicated to the issue of dismissal of a MPC’s member in conjunction with the prohibition of occupying other positions, the adoption of the NBP’s financial statements and the separation of instruments of monetary policy’s instruments for stability of domestic financial system. Introduced changes in the proposed draft reduce the independence of the NBP while making it more subject to the Cabinet. Following the result of further consultations on the draft of Act on the NBP, provisions which reduce the independence of the NBP shall be partially removed.

Modeling gross primary production of agro-forestry ecosystems by assimilation of satellite-derived information in a process-based model.

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Migliavacca, Mirco; Meroni, Michele; Busetto, Lorenzo; Colombo, Roberto; Zenone, Terenzio; Matteucci, Giorgio; Manca, Giovanni; Seufert, Guenther

2009-01-01

In this paper we present results obtained in the framework of a regional-scale analysis of the carbon budget of poplar plantations in Northern Italy. We explored the ability of the process-based model BIOME-BGC to estimate the gross primary production (GPP) using an inverse modeling approach exploiting eddy covariance and satellite data. We firstly present a version of BIOME-BGC coupled with the radiative transfer models PROSPECT and SAILH (named PROSAILH-BGC) with the aims of i) improving the BIOME-BGC description of the radiative transfer regime within the canopy and ii) allowing the assimilation of remotely-sensed vegetation index time series, such as MODIS NDVI, into the model. Secondly, we present a two-step model inversion for optimization of model parameters. In the first step, some key ecophysiological parameters were optimized against data collected by an eddy covariance flux tower. In the second step, important information about phenological dates and about standing biomass were optimized against MODIS NDVI. Results obtained showed that the PROSAILH-BGC allowed simulation of MODIS NDVI with good accuracy and that we described better the canopy radiation regime. The inverse modeling approach was demonstrated to be useful for the optimization of ecophysiological model parameters, phenological dates and parameters related to the standing biomass, allowing good accuracy of daily and annual GPP predictions. In summary, this study showed that assimilation of eddy covariance and remote sensing data in a process model may provide important information for modeling gross primary production at regional scale.

Modeling Gross Primary Production of Agro-Forestry Ecosystems by Assimilation of Satellite-Derived Information in a Process-Based Model

Directory of Open Access Journals (Sweden)

Guenther Seufert

2009-02-01

Full Text Available In this paper we present results obtained in the framework of a regional-scale analysis of the carbon budget of poplar plantations in Northern Italy. We explored the ability of the process-based model BIOME-BGC to estimate the gross primary production (GPP using an inverse modeling approach exploiting eddy covariance and satellite data. We firstly present a version of BIOME-BGC coupled with the radiative transfer models PROSPECT and SAILH (named PROSAILH-BGC with the aims of i improving the BIOME-BGC description of the radiative transfer regime within the canopy and ii allowing the assimilation of remotely-sensed vegetation index time series, such as MODIS NDVI, into the model. Secondly, we present a two-step model inversion for optimization of model parameters. In the first step, some key ecophysiological parameters were optimized against data collected by an eddy covariance flux tower. In the second step, important information about phenological dates and about standing biomass were optimized against MODIS NDVI. Results obtained showed that the PROSAILH-BGC allowed simulation of MODIS NDVI with good accuracy and that we described better the canopy radiation regime. The inverse modeling approach was demonstrated to be useful for the optimization of ecophysiological model parameters, phenological dates and parameters related to the standing biomass, allowing good accuracy of daily and annual GPP predictions. In summary, this study showed that assimilation of eddy covariance and remote sensing data in a process model may provide important information for modeling gross primary production at regional scale.

Biomédica, 2012: diez años en el Index Medicus y cinco en el Science Citation Index

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Comité Editorial Biomédica

2012-06-01

Full Text Available La revista Biomédica del Instituto Nacional de Salud es una publicación trimestral, eminentemente científica, en la que se publican gratuitamente y con acceso abierto, los resultados de las investigaciones en salud y biomedicina del Instituto y de otras instituciones públicas y privadas a nivel nacional e internacional, luego de un exhaustivo proceso editorial que incluye, necesariamente, las rigurosas evaluaciones por pares de la comunidad científica, reconocidos expertos nacionales e internacionales en las diferentes áreas del conocimiento. El cumplir diez años de haber sido incluida en el Index Medicus y cinco en el Science Citation Index –los índices internacionales más importantes para las revistas de ciencias de la salud– es un acontecimiento significativo para la revista. Sin duda alguna, es un momento que marca la madurez de la revista y, a la vez, una oportunidad para reflexionar sobre los logros obtenidos, analizar los desafíos que debe enfrentar y planear la mejor forma de resolverlos. La primera edición de Biomédica se publicó en 1981 y, desde entonces, los miembros de los diferentes comités editoriales siempre han estado atentos a la adopción de los lineamientos internacionales para el mejoramiento de este tipo de publicaciones científicas. Como resultado de ello, la revista ha alcanzado los más altos estándares de edición, como los recomendados por el International Committee of Medical Journal Editors (1. Además de mantener los criterios de objetividad y calidad del material enviado para publicación, la revista implementó un proceso editorial propio que incluye revisiones editoriales iniciales, intermedias y finales por miembros del Comité Editorial o Científico, evaluación por pares y estricta corrección de estilo por expertos en el idioma español e inglés, además de comunicación continua y directa con los autores, diagramación pulcra y dinámica, publicación impresa oportuna y de calidad, y

Positive biodiversity-productivity relationship predominant in global forests.

Science.gov (United States)

Liang, Jingjing; Crowther, Thomas W; Picard, Nicolas; Wiser, Susan; Zhou, Mo; Alberti, Giorgio; Schulze, Ernst-Detlef; McGuire, A David; Bozzato, Fabio; Pretzsch, Hans; de-Miguel, Sergio; Paquette, Alain; Hérault, Bruno; Scherer-Lorenzen, Michael; Barrett, Christopher B; Glick, Henry B; Hengeveld, Geerten M; Nabuurs, Gert-Jan; Pfautsch, Sebastian; Viana, Helder; Vibrans, Alexander C; Ammer, Christian; Schall, Peter; Verbyla, David; Tchebakova, Nadja; Fischer, Markus; Watson, James V; Chen, Han Y H; Lei, Xiangdong; Schelhaas, Mart-Jan; Lu, Huicui; Gianelle, Damiano; Parfenova, Elena I; Salas, Christian; Lee, Eungul; Lee, Boknam; Kim, Hyun Seok; Bruelheide, Helge; Coomes, David A; Piotto, Daniel; Sunderland, Terry; Schmid, Bernhard; Gourlet-Fleury, Sylvie; Sonké, Bonaventure; Tavani, Rebecca; Zhu, Jun; Brandl, Susanne; Vayreda, Jordi; Kitahara, Fumiaki; Searle, Eric B; Neldner, Victor J; Ngugi, Michael R; Baraloto, Christopher; Frizzera, Lorenzo; Bałazy, Radomir; Oleksyn, Jacek; Zawiła-Niedźwiecki, Tomasz; Bouriaud, Olivier; Bussotti, Filippo; Finér, Leena; Jaroszewicz, Bogdan; Jucker, Tommaso; Valladares, Fernando; Jagodzinski, Andrzej M; Peri, Pablo L; Gonmadje, Christelle; Marthy, William; O'Brien, Timothy; Martin, Emanuel H; Marshall, Andrew R; Rovero, Francesco; Bitariho, Robert; Niklaus, Pascal A; Alvarez-Loayza, Patricia; Chamuya, Nurdin; Valencia, Renato; Mortier, Frédéric; Wortel, Verginia; Engone-Obiang, Nestor L; Ferreira, Leandro V; Odeke, David E; Vasquez, Rodolfo M; Lewis, Simon L; Reich, Peter B

2016-10-14

The biodiversity-productivity relationship (BPR) is foundational to our understanding of the global extinction crisis and its impacts on ecosystem functioning. Understanding BPR is critical for the accurate valuation and effective conservation of biodiversity. Using ground-sourced data from 777,126 permanent plots, spanning 44 countries and most terrestrial biomes, we reveal a globally consistent positive concave-down BPR, showing that continued biodiversity loss would result in an accelerating decline in forest productivity worldwide. The value of biodiversity in maintaining commercial forest productivity alone-US$166 billion to 490 billion per year according to our estimation-is more than twice what it would cost to implement effective global conservation. This highlights the need for a worldwide reassessment of biodiversity values, forest management strategies, and conservation priorities. Copyright © 2016, American Association for the Advancement of Science.

High risk for obesity in children with a subtype of developmental coordination disorder.

Science.gov (United States)

Zhu, Yi-Ching; Cairney, John; Li, Yao-Chuen; Chen, Wei-Ying; Chen, Fu-Chen; Wu, Sheng K

2014-07-01

The purpose of this study was to compare the prevalence of overweight and obesity in typically developing (TD) children, children with developmental coordination disorder (DCD) and balance problems (DCD-BP), and children with DCD without balance problems (DCD-NBP). Two thousand and fifty-seven children (1095 boys, 962 girls) ages 9-12 years were recruited from 18 elementary schools in Taiwan. The Movement Assessment Battery for Children was used to assess motor coordination ability. International cut-off points for body mass index were used to classify participants into the following groups: normal-weight, overweight or obese. Compared with TD children, children in the DCD-BP group were more than twice as likely to be obese (OR=2.28; 95% CI=1.41-3.68). DCD-BP children were also more likely to be obese compared to DCD-NBP children (OR=1.79; 95% CI=1.02-3.16). Boys in the DCD-BP group were more likely to be obese when compared to DCD-BP girls (OR=3.12; 95% CI=1.28-7.57). Similarly, DCD-NBP boys were more likely to be obese when compared to DCD-NBP girls (OR=2.67; 95% CI=1.21-5.89). Children with both DCD and BP were significantly more likely to be obese when compared to TD and DCD-NBP children. From an intervention perspective, the inclusion of regular physical activity, including activities that encourage development of both balance and energy expenditure, may be required to prevent obesity in this population. Copyright © 2014 Elsevier Ltd. All rights reserved.

Terrestrial Macrofungal Diversity from the Tropical Dry Evergreen Biome of Southern India and Its Potential Role in Aerobiology.

Science.gov (United States)

Priyamvada, Hema; Akila, M; Singh, Raj Kamal; Ravikrishna, R; Verma, R S; Philip, Ligy; Marathe, R R; Sahu, L K; Sudheer, K P; Gunthe, S S

2017-01-01

Macrofungi have long been investigated for various scientific purposes including their food and medicinal characteristics. Their role in aerobiology as a fraction of the primary biological aerosol particles (PBAPs), however, has been poorly studied. In this study, we present a source of macrofungi with two different but interdependent objectives: (i) to characterize the macrofungi from a tropical dry evergreen biome in southern India using advanced molecular techniques to enrich the database from this region, and (ii) to assess whether identified species of macrofungi are a potential source of atmospheric PBAPs. From the DNA analysis, we report the diversity of the terrestrial macrofungi from a tropical dry evergreen biome robustly supported by the statistical analyses for diversity conclusions. A total of 113 macrofungal species belonging to 54 genera and 23 families were recorded, with Basidiomycota and Ascomycota constituting 96% and 4% of the species, respectively. The highest species richness was found in the family Agaricaceae (25.3%) followed by Polyporaceae (15.3%) and Marasmiaceae (10.8%). The difference in the distribution of commonly observed macrofungal families over this location was compared with other locations in India (Karnataka, Kerala, Maharashtra, and West Bengal) using two statistical tests. The distributions of the terrestrial macrofungi were distinctly different in each ecosystem. We further attempted to demonstrate the potential role of terrestrial macrofungi as a source of PBAPs in ambient air. In our opinion, the findings from this ecosystem of India will enhance our understanding of the distribution, diversity, ecology, and biological prospects of terrestrial macrofungi as well as their potential to contribute to airborne fungal aerosols.

Scale and the isotopic record of C4 plants in pedogenic carbonate: from the biome to the rhizospere.

Energy Technology Data Exchange (ETDEWEB)

Monger, Dr. H Curtis [New Mexico State University, Las Cruces; Cole, David R [ORNL; Buck, Dr. Brenda [University of Nevada, Las Vegas; Gallegos, Robert [Sant fe Water Division

2009-01-01

The 13C/12C ratio in pedogenic carbonate (i.e., CaCO3 formed in soil) is a significant tool for investigating C4 biomes of the past. However, the paleoecological meaning of d13C values in pedogenic carbonate can change with the scale at which one considers the data. We describe studies of modern soils, fossil soils, and vegetation change in the Chihuahuan Desert of North America and elsewhere that reveal four scales important for paleoecologic interpretations. (1) At the broadest scale, the biome scale (hundreds to millions of km2), an isotopic record interpreted as C3 vegetation replacing C4 grasslands may indicate invading C3 woody shrubs instead of expanding C3 forests (a common interpretation). (2) At the landscape scale (several tens of m2 to hundreds of km2), the accuracy of scaling up paleoclimatic interpretations to a regional level is affected by the landform containing the isotopic record. (3) At the soil-profile scale (cm2 to m2), soil profiles with multiple generations of carbonate mixed together have a lower-resolution paleoecologic record than soil profiles repeatedly buried. (4) At the rhizosphere scale (lm2 to cm2), carbonate formed on roots lack the 14 17 enrichment observed at broader scales, revealing different fractionation processes at different scales. A multi-scale approach in dealing with d13C in pedogenic carbonate will increase the accuracy of paleoecologic interpretations and understanding of soil geomorphic climatic interactions that affect boundaries between C4 and C3 vegetation.

Scale and the isotopic record of C4 plants in pedogenic carbonate: from the biome to the rhizosphere

Energy Technology Data Exchange (ETDEWEB)

Monger, Dr. H Curtis [New Mexico State University, Las Cruces; Cole, David [Ohio State University; Buck, Dr. Brenda [University of Nevada, Las Vegas; Gallegos, Robert [Sant fe Water Division

2009-01-01

The 13C/12C ratio in pedogenic carbonate (i.e., CaCO3 formed in soil) is a significant tool for investigating C4 biomes of the past. However, the paleoecological meaning of d13C values in pedogenic carbonate can change with the scale at which one considers the data. We describe studies of modern soils, fossil soils, and vegetation change in the Chihuahuan Desert of North America and elsewhere that reveal four scales important for paleoecologic interpretations. (1) At the broadest scale, the biome scale (hundreds to millions of km2), an isotopic record interpreted as C3 vegetation replacing C4 grasslands may indicate invading C3 woody shrubs instead of expanding C3 forests (a common interpretation). (2) At the landscape scale (several tens of m2 to hundreds of km2), the accuracy of scaling up paleoclimatic interpretations to a regional level is affected by the landform containing the isotopic record. (3) At the soil-profile scale (cm2 to m2), soil profiles with multiple generations of carbonate mixed together have a lower-resolution paleoecologic record than soil profiles repeatedly buried. (4) At the rhizosphere scale (lm2 to cm2), carbonate formed on roots lack the 14 17 enrichment observed at broader scales, revealing different fractionation processes at different scales. A multi-scale approach in dealing with d13C in pedogenic carbonate will increase the accuracy of paleoecologic interpretations and understanding of soil geomorphic climatic interactions that affect boundaries between C4 and C3 vegetation.

NASA Standards Inform Comfortable Car Seats

Science.gov (United States)

2014-01-01

NASA developed standards, which included the neutral body posture (NBP), to specify ways to design flight systems that support human health and safety. Nissan Motor Company, with US offices in Franklin, Tennessee, turned to NASA's NBP research for the development of a new driver's seat. The 2013 Altima now features the new seat, and the company plans to incorporate the seats in upcoming vehicles.

Programs to Provide Diagnostic Capabilities for ASTRAL,

Science.gov (United States)

1982-02-01

detailed ray trace front end are contained in arrays BRANGE and DEPTH found in labeled common - /BOTTOM/. The remainder of the range/depth pairs are found...in arrays RENV and DEP. DO 300 J = 1, NBP 4-3 17 IC -KM V "WNW 06 300 WRITE(3) BRANGE (J), DEPTH(J) DO 301 J = 2, NENV i IF (RENV(J).LE.BRANGE(NBP

Produção de mel nos biomas Amazônia, Cerrado e Pantanal, em Mato Grosso, no período de 2002 a 2011

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Jennifer Oberger Ferreira

2016-12-01

Full Text Available Beekeeping is an economic activity that uses the natural environment without forest degradation and promotes the service of pollination of the species cultivated in an anthropic environment. The purpose of this study was to analyze honey production in Mato Grosso biomes of the Amazon, Cerrado (Bushlands and Pantanal (Swamplands from 2002 to 2011. Information on the production of honey by each municipality was obtained from the Brazilian Institute of Geography and Statistics database (IBGE. The delimitation of the municipalities for each biome was defined according to IBGE. The production of honey was the greatest in the Amazon, with 46.88% of the State production and the participation of 58 municipalities from this biome; Cerrado (Bushlands produced 42% of the State’s honey with the participation of 50 producing municipalities, and Pantanal (Swamplands produced 10.82% of the honey with 8 municipalities. We conclude that the Mato Grosso biomes showed beekeeping potential, with greater productive capacity in Pantanal (Swamplands due to its higher productivity rate.

Procedimiento para la obtención de células madre mesenquimales para uso biomédico

OpenAIRE

Menéndez, Pablo; Ligero, G.; Sánchez, L.; Gutiérrez-Aranda, I.; Rodríguez-González, René; Rubio-Amador, Ruth; Bueno, C.; Ramos-Mejía, Verónica; Delgado, M.

2010-01-01

[ES] Procedimiento de obtención de células madre mesenquimales para uso biomédico. La presente invención describe un procedimiento de obtención de CMMs a partir de cultivos de PSC, mediante la inhibición de la via de señalización SMAD2/3, preferentemente con el inhibidor quimico 4-[4-(1,3- Benzodioxol-5-il)-5-(2-piridinil)-1 H-imidazol-2-il] benzamida. Las PSCCMMs descritas en la presente invención, son capaces de diferenciarse a células de la línea osteogénica, condrogénica y adi...

Biomateriales para implantes intraóseos: contribución y desafío en el área biomédica

OpenAIRE

Guglielmotti, Maria Beatriz; Cabrini, R. L.; Olmedo, Daniel Gustavo; Universidad de Buenos Aires. Facultad de Odontología. Cátedra de Anatomía Patológica

2017-01-01

Los biomateriales son aquellos materiales diseñados para ser implantados o incorporados dentro del sistema vivo con el fin de sustituir o regenerar tejidos y sus funciones. Williams los define como aquellos materiales utilizados en dispositivos de uso biomédico diseñados para interactuar con los sistemas biológicos. Clásicamente los biomateriales se dividen en cuatro grupos: polímeros, metales, cerámicos y naturales. Cuando se combinan dos materiales diferentes se obtiene un material compuest...

La libertad de creación y producción científica : especial referencia a la ley de investigación biomédica

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Yolanda Gómez Sanchez

2009-05-01

Full Text Available No hay en la Constitución española una referencia directa y explícita a la investigación biomédica ni encontramos tampoco en el Texto Fundamental referencias a otros problemas derivados de estas nuevas tecnologías. Sí contiene la Constitución, sin embargo, referencias directas a la investigación en general (arts. 44.2, 148.1.17 y 149.1.15; y ha reconocido, como derecho fundamental, la producción y creación científica en el artículo 20.1b. En este artículo se defiende que la libertad de investigación forma parte del contenido esencial del derecho fundamental a la producción y creación científica. Se analizan también los principios que integra la Ley de Investigación Biomédica y se cuestiona la ausencia en esta Ley de referencias explícitas al dereco a la libertad y a la igualdad

Structure of Drosophilidae Assemblage (Insecta, Diptera in Pampa Biome (São Luiz Gonzaga, RS

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Jean Lucas Poppe

2012-01-01

Full Text Available The Brazilian Pampa (the southernmost end of the country is currently a highly modified environment because of increasing agricultural activities. In many places, only small parts of grasslands remain inside an agricultural landscape. Drosophilidae (Diptera have been widely used as a potential bioindicators to monitor the effects of anthropogenic changes in natural environments. However, the fauna of Drosophilidae in the Pampa Biome from natural and disturbed environments, still remains largely unknown. The present study represents one of the first attempts to fill this gap, showing results from monthly collections in the municipality of São Luiz Gonzaga (28º24'28"S, 54º57'39"W, in the Brazilian Pampa. A species inventory was carried out in two contrasting environments, an urban zone and a forest remnant (rural zone. In both areas banana-baited traps were used to capture adult drosophilids. The identification was made using external morphology and male terminalia. In total, 13,379 drosophilids were analyzed (rural zone: N = 8,812 and Sobs = 25; urban zone: N = 4,567 and Sobs = 16. In the present study, 16 (60% out of 26 species were found exclusively or preferentially in the forest. The period of highest richness was between the months of June to November (roughly winter and spring, and the period of lowest richness was from December to May (roughly summer and autumn. An analysis of cluster by the Coefficient of Jaccard showed that species composition slightly changes when the period of the year with higher temperatures (from January to May is compared with the period with lower temperatures (from June to October. The species abundances were also highly affected by seasonality, as revealed by the Morisita Index, since the samples clustered into similar groups in consecutive periods and in the same season, showing the seasonal preference of some species. The time component was a determinant in the diversity of the assemblage, surpassing the

Developing a Data Driven Process-Based Model for Remote Sensing of Ecosystem Production

Science.gov (United States)

Elmasri, B.; Rahman, A. F.

2010-12-01

Estimating ecosystem carbon fluxes at various spatial and temporal scales is essential for quantifying the global carbon cycle. Numerous models have been developed for this purpose using several environmental variables as well as vegetation indices derived from remotely sensed data. Here we present a data driven modeling approach for gross primary production (GPP) that is based on a process based model BIOME-BGC. The proposed model was run using available remote sensing data and it does not depend on look-up tables. Furthermore, this approach combines the merits of both empirical and process models, and empirical models were used to estimate certain input variables such as light use efficiency (LUE). This was achieved by using remotely sensed data to the mathematical equations that represent biophysical photosynthesis processes in the BIOME-BGC model. Moreover, a new spectral index for estimating maximum photosynthetic activity, maximum photosynthetic rate index (MPRI), is also developed and presented here. This new index is based on the ratio between the near infrared and the green bands (ρ858.5/ρ555). The model was tested and validated against MODIS GPP product and flux measurements from two eddy covariance flux towers located at Morgan Monroe State Forest (MMSF) in Indiana and Harvard Forest in Massachusetts. Satellite data acquired by the Advanced Microwave Scanning Radiometer (AMSR-E) and MODIS were used. The data driven model showed a strong correlation between the predicted and measured GPP at the two eddy covariance flux towers sites. This methodology produced better predictions of GPP than did the MODIS GPP product. Moreover, the proportion of error in the predicted GPP for MMSF and Harvard forest was dominated by unsystematic errors suggesting that the results are unbiased. The analysis indicated that maintenance respiration is one of the main factors that dominate the overall model outcome errors and improvement in maintenance respiration estimation

La asignación de recursos y la investigación biomédica

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Artells Herrero, Juan José

2001-10-01

Full Text Available Not available

Nadie parece cuestionar, al menos desde el punto de vista teórico, que la Investigación junto con la Docencia, son compañeros inseparables del objetivo último de un Sistema Sanitario moderno y consolidado, que no es otro que el de dar respuesta eficiente a las expectativas de salud de las personas. Aspectos como asignación de recursos, priorización, cadena de valor, coste de oportunidad, necesidad, contrato programa, producción conjunta, bien público, reputación, riesgo y especificidad de activos, se tratan a lo largo del artículo. Los recursos que a tal fin se asignen, la valoración de prioridades y el análisis conceptual de lo que cabe considerar como investigación biomédica, son objeto de tratamiento en esta exposición.

Population Genetic Structure of Cnesterodon decemmaculatus (Poeciliidae): A Freshwater Look at the Pampa Biome in Southern South America.

Science.gov (United States)

Ramos-Fregonezi, Aline M C; Malabarba, Luiz R; Fagundes, Nelson J R

2017-01-01

The Pampas is a Neotropical biome formed primarily by low altitude grasslands and encompasses the southernmost portion of Brazil, Uruguay, and part of Argentina. Despite the high level of endemism, and its significant environmental heterogeneity, Pampean species are underrepresented in phylogeographic studies, especially aquatic organisms. The Pampean hydrological system resulted from a long history of tectonism, climate, and sea level changes since the Neogene. In this study, we examined the population genetic structure of Cnesterodon decemmaculatus , a freshwater fish species that occurs throughout most of the Pampa biome. We characterized mitochondrial and autosomal genetic lineages in populations sampled from Southern Brazil and Uruguay to investigate (1) the correspondence between current drainage systems and evolutionary lineages, (2) the demographic history for each genetic lineage, and (3) the temporal depth of these lineages. Overall, we found that the major evolutionary lineages in this species are strongly related to the main Pampean drainage systems, even though stream capture events may have affected the distribution of genetic lineages among drainages. There was evidence for recent population growth in the lineages occupying drainages closest to the shore, which may indicate the effect of quaternary sea-level changes. In general, divergence time estimates among evolutionary lineages were shallow, ranging from 20,000 to 800,000 years before present, indicating a geologically recent history for this group, as previously reported in other Pampean species. A Bayesian phylogeographical reconstruction suggested that an ancestral lineage probably colonized the Uruguay River Basin, and then expanded throughout the Pampas. This evolutionary scenario may represent useful starting models for other freshwater species having a similar distribution.

Population Genetic Structure of Cnesterodon decemmaculatus (Poeciliidae: A Freshwater Look at the Pampa Biome in Southern South America

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Aline M. C. Ramos-Fregonezi

2017-12-01

Full Text Available The Pampas is a Neotropical biome formed primarily by low altitude grasslands and encompasses the southernmost portion of Brazil, Uruguay, and part of Argentina. Despite the high level of endemism, and its significant environmental heterogeneity, Pampean species are underrepresented in phylogeographic studies, especially aquatic organisms. The Pampean hydrological system resulted from a long history of tectonism, climate, and sea level changes since the Neogene. In this study, we examined the population genetic structure of Cnesterodon decemmaculatus, a freshwater fish species that occurs throughout most of the Pampa biome. We characterized mitochondrial and autosomal genetic lineages in populations sampled from Southern Brazil and Uruguay to investigate (1 the correspondence between current drainage systems and evolutionary lineages, (2 the demographic history for each genetic lineage, and (3 the temporal depth of these lineages. Overall, we found that the major evolutionary lineages in this species are strongly related to the main Pampean drainage systems, even though stream capture events may have affected the distribution of genetic lineages among drainages. There was evidence for recent population growth in the lineages occupying drainages closest to the shore, which may indicate the effect of quaternary sea-level changes. In general, divergence time estimates among evolutionary lineages were shallow, ranging from 20,000 to 800,000 years before present, indicating a geologically recent history for this group, as previously reported in other Pampean species. A Bayesian phylogeographical reconstruction suggested that an ancestral lineage probably colonized the Uruguay River Basin, and then expanded throughout the Pampas. This evolutionary scenario may represent useful starting models for other freshwater species having a similar distribution.

Long-term effects of a parenting preventive intervention on young adults' painful feelings about divorce.

Science.gov (United States)

Christopher, Caroline; Wolchik, Sharlene; Tein, Jenn-Yun; Carr, Colleen; Mahrer, Nicole E; Sandler, Irwin

2017-10-01

This study examined whether the New Beginnings Program (NBP), a parenting preventive intervention for divorced mothers that was designed to reduce children's postdivorce mental health problems, reduced painful feelings about divorce in young adults whose families had participated 15 years earlier. This study also explored whether NBP participation reduced the relations between young adults' painful feelings about divorce and their concurrent internalizing, externalizing, and substance use problems. Participants (M = 25.6 years; 50% female; 88% Caucasian) were from 240 families that had been recruited into a randomized experimental trial (NBP vs. literature control). Data from the pretest and 15-year follow-up were used. NBP participants reported less feelings of seeing life through a filter of divorce (e.g., thinking about how the divorce causes continued struggles for them) than those in the control condition. Program effects on maternal blame and acceptance of the divorce were moderated by pretest risk, a composite of divorce-related stressors and externalizing problems. NBP participants with elevated risk at program entry had lower levels of maternal blame. Program participation was associated with higher acceptance for those with elevated risk at program entry but lower acceptance for those with low risk at program entry. Program participation decreased the relations between maternal blame, acceptance of the divorce and filter of divorce and some, but not all, of the adjustment outcomes. These findings suggest that programs designed to help families after divorce have benefits in terms of long-term feelings about parental divorce as well as their relations with adjustment problems. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

Design of InAs/GaSb superlattice infrared barrier detectors

Science.gov (United States)

Delmas, M.; Rossignol, R.; Rodriguez, J. B.; Christol, P.

2017-04-01

Design of InAs/GaSb type-II superlattice (T2SL) infrared barrier detectors is theoretically investigated. Each part of the barrier structures is studied in order to achieve optimal device operation at 150 K and 77 K, in the midwave and longwave infrared domain, respectively. Whatever the spectral domain, nBp structure with a p-type absorbing zone and an n-type contact layer is found to be the most favourable detector architecture allowing a reduction of the dark-current associated with generation-recombination processes. The nBp structures are then compared to pin photodiodes. The MWIR nBp detector with 5 μm cut-off wavelength can operate up to 120 K, resulting in an improvement of 20 K on the operating temperature compared to the pin device. The dark-current density of the LWIR nBp device at 77 K is expected to be as low as 3.5 × 10-4 A/cm2 at 50 mV reverse bias, more than one decade lower than the usual T2SL photodiode. This result, for a device having cut-off wavelength at 12 μm, is at the state of the art compared to the well-known MCT 'rule 07'.

A Review of Recent Advances in Neuroprotective Potential of 3-N-Butylphthalide and Its Derivatives

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Idriss Ali Abdoulaye

2016-01-01

Full Text Available The research of alternative treatment for ischemic stroke and degenerative diseases has always been a priority in neurology. 3-N-Butylphthalide (NBP, a family of compounds initially isolated from the seeds of Apium graveolens Linn., has shown significant neuroprotective effects. Previous extensive studies have demonstrated that NBP promotes a better poststroke outcome and exerts a multitargeted action on several mechanisms, from oxidative stress to mitochondrial dysfunction to apoptosis to inflammation. Additionally, recent findings on several neurological disorders have shown that NBP’s beneficial effects extend beyond the management of stroke. However, despite the increasing number of studies toward a better understanding and the rapid advances made in therapeutic options, to date, dl-3-N-butylphthalide, a synthetic variation of l-3-N-butylphthalide, remains the only clinically approved anti-ischemic agent in China, stressing the difficulties for a viable and effective transition from experimental to clinical practice. Events indicate that NBP, due to its multitargeted effect and the adaptability of its basic structure, can be an important game changer and a precursor to a whole new therapeutic approach to several neurological conditions. The present review discusses recent advances pertaining to the neuroprotective mechanisms of NBP-derived compounds and the possibility of their clinical implementation in the management of various neurological conditions.

The responses of net primary production (NPP) and total carbon storage for the continental United States to changes in atmospheric CO{sub 2}, climate, and vegetation

Energy Technology Data Exchange (ETDEWEB)

McGuire, D.A. [Marine Biological Lab., Woods Hole, MA (United States)

1995-06-01

We extrapolated 3 biogeochemistry models (BIOME-BGC, CENTURY, and TEM) across the continental US with the vegetation distributions of 3 biogeography models (BIOME2, DOLY, and MAPSS) for contemporary climate at 355 ppmv CO{sub 2} and each of 3 GCM climate scenarios at 710 ppmv. For contemporary conditions, continental NPP ranges from 3132 to 3854 TgC/yr and total carbon storage ranges from 109 to 125 PgC. The responses of NPP range from no response (BIOME-BGC with DOLY or MAPSS vegetations for UKMO climate) to increases of 53% and 56% (TEM with BIOME2 vegetations for GFDL and OSU climates). The responses of total carbon storage vary from a decrease of 39% (BIOME-BGC with MAPSS vegetation for UKMO climate) to increases of 52% and 56% (TEM with BIOME2 vegetations for OSU and GFDL climates). The UKMO responses of BIOME-BGC with MAPSS vegetation are caused by both decreased forest area (from 44% to 38%) and photosynthetic water stress. The OSU and GFDL responses of TEM with BIOME2 vegetations are caused by forest expansion (from 46% to 67% for OSU and to 75% for GFDL) and increased nitrogen cycling.

Voltammetric Determination of Carcinogenic Nitrobiphenyls at a Hanging Mercury Drop Electrode

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Jiří Zima

2003-02-01

Full Text Available Differential pulse voltammetry (DPV and adsorptive stripping voltammetry (AdSV at a hanging mercury drop electrode (HMDE was used for the determination of trace amounts of carcinogenic nitrobiphenyls, namely 2-nitrobiphenyl (2-NBP, 3-nitrobiphenyl (3-NBP and 4-nitrobiphenyl (4-NBP within the concentration range from 2.10-8 to 1.10-5 mol⋅L-1 for DPV and from 2.10-9 to 1.10-7 mol⋅L-1 for AdSV using a Britton-Robinson buffer – methanol (1:1 mixture with resulting pH 12 as a base electrolyte. The practical applicability of newly developed methods was verified using model samples of drinking and river water and liquid-liquid extraction for a preliminary separation and preconcentration.

Plants of the fynbos biome harbour host species-specific bacterial communities.

Science.gov (United States)

Miyambo, Tsakani; Makhalanyane, Thulani P; Cowan, Don A; Valverde, Angel

2016-08-01

The fynbos biome in South Africa is globally recognised as a plant biodiversity hotspot. However, very little is known about the bacterial communities associated with fynbos plants, despite interactions between primary producers and bacteria having an impact on the physiology of both partners and shaping ecosystem diversity. This study reports on the structure, phylogenetic composition and potential roles of the endophytic bacterial communities located in the stems of three fynbos plants (Erepsia anceps, Phaenocoma prolifera and Leucadendron laureolum). Using Illumina MiSeq 16S rRNA sequencing we found that different subpopulations of Deinococcus-Thermus, Alphaproteobacteria, Acidobacteria and Firmicutes dominated the endophytic bacterial communities. Alphaproteobacteria and Actinobacteria were prevalent in P. prolifera, whereas Deinococcus-Thermus dominated in L. laureolum, revealing species-specific host-bacteria associations. Although a high degree of variability in the endophytic bacterial communities within hosts was observed, we also detected a core microbiome across the stems of the three plant species, which accounted for 72% of the sequences. Altogether, it seems that both deterministic and stochastic processes shaped microbial communities. Endophytic bacterial communities harboured putative plant growth-promoting bacteria, thus having the potential to influence host health and growth. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

A dated phylogeny and collection records reveal repeated biome shifts in the African genus Coccinia (Cucurbitaceae

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Renner Susanne S

2011-01-01

Full Text Available Abstract Background Conservatism in climatic tolerance may limit geographic range expansion and should enhance the effects of habitat fragmentation on population subdivision. Here we study the effects of historical climate change, and the associated habitat fragmentation, on diversification in the mostly sub-Saharan cucurbit genus Coccinia, which has 27 species in a broad range of biota from semi-arid habitats to mist forests. Species limits were inferred from morphology, and nuclear and plastid DNA sequence data, using multiple individuals for the widespread species. Climatic tolerances were assessed from the occurrences of 1189 geo-referenced collections and WorldClim variables. Results Nuclear and plastid gene trees included 35 or 65 accessions, representing up to 25 species. The data revealed four species groups, one in southern Africa, one in Central and West African rain forest, one widespread but absent from Central and West African rain forest, and one that occurs from East Africa to southern Africa. A few individuals are differently placed in the plastid and nuclear (LFY trees or contain two ITS sequence types, indicating hybridization. A molecular clock suggests that the diversification of Coccinia began about 6.9 Ma ago, with most of the extant species diversity dating to the Pliocene. Ancestral biome reconstruction reveals six switches between semi-arid habitats, woodland, and forest, and members of several species pairs differ significantly in their tolerance of different precipitation regimes. Conclusions The most surprising findings of this study are the frequent biome shifts (in a relatively small clade over just 6 - 7 million years and the limited diversification during and since the Pleistocene. Pleistocene climate oscillations may have been too rapid or too shallow for full reproductive barriers to develop among fragmented populations of Coccinia, which would explain the apparently still ongoing hybridization between certain

Ornamental Eudicotyledons from grasslands of Pampa biome in Rio Grande do Sul

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Ana De Araújo Carrion

2012-10-01

Full Text Available The present study aims at investigating the group of Eudicotyledons native plants with ornamental potential of grasslands from the Pampa biome in the south of Brazil. The Pampa presents a high level of biodiversity; however, it requires studies related to the richness of vascular plants and its biological and ecological knowledge. The purpose of this work is to elaborate a preliminary inventory of this group of plants, analyzing the ornamental potential of each specie and indicating those that could be considered as being priorities for the purpose of sustainable use with this objective. Some grassland species were selected through the search for information in herbarium registers, national and international works about decorative plants, floristic surveys, besides the authors´ practical knowledge. Some parameters and values were associated, aiming at reducing the subjectivity of the choice. The survey resulted in a list of 177 species distributed in 36 families and 101 genera. Among these species, ten presented high ornamental potential. These data show that the richness of the grassland native ornamental flora is high, even though its use is poorly known. The use of these plants, if in a sustainable manner, can produce economic and ecological benefits.

Genetic Divergence in Eucalyptus camaldulensis Progenies in the Savanna Biome in Mato Grosso, Brazil.

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Reginaldo Brito da Costa

Full Text Available Assessing the parental genetic differences and their subsequent prediction of progeny performance is an important first step to assure the efficiency of any breeding program. In this study, we estimate the genetic divergence in Eucalyptus camaldulensis based on the morphological traits of 132 progenies grown in a savanna biome. Thus, a field experiment was performed using a randomized block design and five replications to compare divergences in total height, commercial height, diameter at breast height, stem form and survival rate at 48 months. Tocher's clustering method was performed using the Mahalanobis and Euclidian distances. The Mahalanobis distance seemed more reliable for the assessed parameters and clustered all of the progenies into fourteen major groups. The most similar progenies (86 accessions were clustered into Group I, while the most dissimilar (1 progeny represented Group XIV. The divergence analysis indicated that promising crosses could be made between progenies allocated in different groups for high genetic divergence and for favorable morphological traits.

Seleção de caramboleiras pelas características biométricas e físico-químicas dos frutos

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Araújo Paulo Sérgio Rodrigues de

2001-01-01

Full Text Available Caracterizaram-se caramboleiras relacionando as características biométricas e físico-químicas dos frutos. Foram utilizadas 15 caramboleiras de pomar comercial, em Mirandópolis-SP. Procederam-se seis coletas de 50 frutos por planta, no período entre 1997 e 1999, para avaliações biométricas de comprimento, diâmetro, massa, número de gomos e sementes. Nas referidas coletas para avaliação dos parâmetros físico-químicos, utilizaram-se três frutos por planta, sendo analisados: sólidos solúveis totais (SST, acidez total titulável (ATT, "ratio", firmeza de polpa, pH e coloração externa. Duas plantas foram superiores às demais em relação ao comprimento e massa dos frutos, apresentando elevados teores de SST e "ratio", entretanto, baixa ATT, características interessantes para o consumo fresco. Contudo, foi limitante o grande número de sementes de uma planta em relação à outra. Como opção para porta-enxerto, devido ao elevado número de sementes nos frutos, destacaram-se três plantas. Com potencial para processamento foi selecionada uma planta, decorrente da elevada ATT, baixo número de sementes e tamanho do fruto entre médio e grande.

Strategies to increase cellulase production with submerged fermentation using fungi isolated from the Brazilian biome

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Genilton da Silva Faheina Junior

2015-03-01

Full Text Available Studies on new microbial sources of cellulase and accurate assessment of the steps that increase cellulase production are essential strategies to reduce costs of various processes using such enzymes. This study aimed at the selection of cellulase-producing filamentous fungi, and at the research of parameters involving cellulase production by submerged fermentation. The first test consisted of selecting the best cellulase-producing microorganisms (FPase in Erlenmeyer flasks containing 200 mL of specific growth medium. The next test was designed to further investigate the enzyme production in fermentation with four types of soluble sugars: glucose, lactose, sucrose and xylose. In bioreactor tests, three different inoculation strategies were analyzed. The best FPase activity was presented by the strain Trichoderma sp. CMIAT 041 (49.9 FPU L-1 and CMCase by the fungus Lasiodiplodia theobromae CMIAT 096 (350.0 U L-1. Sucrose proved to be the best option among the soluble sugars tested, with higher rates of FPase activity (49.9 FPU L-1 and CMCase (119.7 U L-1. The best inoculation strategy for the bioreactor was a spore suspension obtained from a semi-solid state fermentation of wheat bran for 72h.

Blanching improves anthocyanin absorption from highbush blueberry ( Vaccinium corymbosum L.) purée in healthy human volunteers: a pilot study.

Science.gov (United States)

Del Bo', Cristian; Riso, Patrizia; Brambilla, Ada; Gardana, Claudio; Rizzolo, Anna; Simonetti, Paolo; Bertolo, Gianni; Klimis-Zacas, Dorothy; Porrini, Marisa

2012-09-12

Blueberries ( Vaccinium corymbosum L.) are rich sources of phenolics and anthocyanins (ACNs). We investigated the absorption of ACNs after consumption of one portion (300 g) of minimally processed blueberry purée (P) obtained from blanched (BL) or unblanched (NB) berries. A repeated-measures, crossover design study was conducted on healthy human volunteers. Blood was drawn between baseline and 24 h after BL-P or NB-P consumption, while urine were collected from the day before the experiment up to 48 h. Total plasma ACN content was not significantly different, while phenolics content was higher in BL-P with respect to NB-P. The maximum ACN absorption in plasma was observed after 1.5 h from the intake of the purées and was significantly higher (p ≤ 0.05) after the intake of BL-P. Both products increased the excretion of hippuric acid in urine. In conclusion, blanching had no significant effect on total ACN content and enhanced their absorption from minimally processed purées.

JPRS Report Supplement, East Europe, Poland: Recent Legislation.

Science.gov (United States)

1990-05-10

hereto- 3) protection of the health of animals, production of fore the parent agency had been the Minister of Agricul- veterinary medicines , and...sanitary- veterinary supervi- ture, Forestry, and Food Industries. sion of foods of animal origin; 4) fishery in inland waters; Article 8. In the Decree of...of the state’schairman of the NBP.Aril17ThNPdrfsasmtosftesaes monetary policy that specify in particular the evolution of Article 11. 1. Counterfeit

A spatial assessment of Brassica napus gene flow potential to wild and weedy relatives in the Fynbos Biome

Directory of Open Access Journals (Sweden)

J. M. Kalwij

2010-01-01

Full Text Available Gene flow between related plant species, and between transgenic and non-transgenic crop varieties, may be considered a form of biological invasion. Brassica napus (oilseed rape or canola and its relatives are well known for intra- and inter-specific gene flow, hybridisation and weediness. Gene flow associated with B. napus poses a potential ecological risk in the Fynbos Biome of South Africa, because of the existence of both naturalised (alien, weedy and native relatives in this region. This risk is particularly pertinent given the proposed use of B. napus for biofuel and the potential future introduction of herbicide-tolerant transgenic B. napus. Here we quantify the presence and co-occurrence of B. napus and its wild and weedy relatives in the Fynbos Biome, as a first step in the ecological risk assessment for this crop. Several alien and at least one native relative of B. napus were found to be prevalent in the region, and to be spatially congruent with B. napus fields. The first requirement for potential gene flow to occur has thus been met. In addition, a number of these species have elsewhere been found to be reproductively compatible with B. napus. Further assessment of the potential ecological risks associated with B. napus in South Africa is constrained by uncertainties in the phylogeny of the Brassicaceae, difficulties with morphology-based identification, and poor knowledge of the biology of several of the species involved, particularly under South African conditions.

investigating the production ting the production of biodiesel from ...

African Journals Online (AJOL)

eobe

reaction temperature, time of reaction and oil to m preliminary investigation of ... Biodiesel fuel is one example of biom energy and it is generally ..... Table 2: Percentage FFA of the Mango Seed Oil before. Esterification. Table 3: Percentage FFA of the Mango Seed Oil after. Esterification. Properties First titre value. (Average).

Sequential optimization of a terrestrial biosphere model constrained by multiple satellite based products

Science.gov (United States)

Ichii, K.; Kondo, M.; Wang, W.; Hashimoto, H.; Nemani, R. R.

2012-12-01

Various satellite-based spatial products such as evapotranspiration (ET) and gross primary productivity (GPP) are now produced by integration of ground and satellite observations. Effective use of these multiple satellite-based products in terrestrial biosphere models is an important step toward better understanding of terrestrial carbon and water cycles. However, due to the complexity of terrestrial biosphere models with large number of model parameters, the application of these spatial data sets in terrestrial biosphere models is difficult. In this study, we established an effective but simple framework to refine a terrestrial biosphere model, Biome-BGC, using multiple satellite-based products as constraints. We tested the framework in the monsoon Asia region covered by AsiaFlux observations. The framework is based on the hierarchical analysis (Wang et al. 2009) with model parameter optimization constrained by satellite-based spatial data. The Biome-BGC model is separated into several tiers to minimize the freedom of model parameter selections and maximize the independency from the whole model. For example, the snow sub-model is first optimized using MODIS snow cover product, followed by soil water sub-model optimized by satellite-based ET (estimated by an empirical upscaling method; Support Vector Regression (SVR) method; Yang et al. 2007), photosynthesis model optimized by satellite-based GPP (based on SVR method), and respiration and residual carbon cycle models optimized by biomass data. As a result of initial assessment, we found that most of default sub-models (e.g. snow, water cycle and carbon cycle) showed large deviations from remote sensing observations. However, these biases were removed by applying the proposed framework. For example, gross primary productivities were initially underestimated in boreal and temperate forest and overestimated in tropical forests. However, the parameter optimization scheme successfully reduced these biases. Our analysis

Henry Hub and national balancing point prices: what will be the international gas price reference?

International Nuclear Information System (INIS)

Mazighi, A.E.H.

2005-01-01

One of the lessons in the history of international trade in commodities is the emergence - sooner or later - of an international price reference, most commonly known as an international marker price. In the area of oil, West Texas Intermediate (WTI) plays the role of a marker for sour crudes traded in the Atlantic basin. Brent oil fulfils this function for sweet crudes traded in Europe. Another important aspect in the area of global commodities is that the emergence of a marker price is not always necessarily related to the relative share of production of exports of the commodity, but primarily to the existence of an organized market for this commodity. Today, while international gas trade is intensifying, we still lack an international price reference for this commodity. This is due to the fact that the international trade of natural gas is still highly regionalized. It is also due to the fact that most gas markets are still regulated. Nevertheless, deregulation efforts have been implemented in both developed (the United States, the United Kingdom, continental Europe, Korea) and developing countries (Brazil, Chile) and have led to new market structures based on more competition in all segments of the gas chain, except transportation. In the meantime, price structures based on supply and demand principles are supposed to have emerged in the US and UK markets in the 1990s as a result of the implementation of deregulation measures. Today, the US gas market, which represents more than 660 billion cubic metres per year of consumption and the UK gas market, which is close to 100 bcm annually, are considered mature enough to make the principles of supply and demand operate inside these markets. In fact, the Henry Hub (HH) price, which is determined at a physical location in Louisiana, US, and the national balancing point (NBP) price, which is determined somewhere inside the national transmission system (NTS), without any precise location, are considered as potential

Recombination and horizontal transfer of nodulation and ACC deaminase (acdS) genes within Alpha- and Betaproteobacteria nodulating legumes of the Cape Fynbos biome.

Science.gov (United States)

Lemaire, Benny; Van Cauwenberghe, Jannick; Chimphango, Samson; Stirton, Charles; Honnay, Olivier; Smets, Erik; Muasya, A Muthama

2015-11-01

The goal of this work is to study the evolution and the degree of horizontal gene transfer (HGT) within rhizobial genera of both Alphaproteobacteria (Mesorhizobium, Rhizobium) and Betaproteobacteria (Burkholderia), originating from South African Fynbos legumes. By using a phylogenetic approach and comparing multiple chromosomal and symbiosis genes, we revealed conclusive evidence of high degrees of horizontal transfer of nodulation genes among closely related species of both groups of rhizobia, but also among species with distant genetic backgrounds (Rhizobium and Mesorhizobium), underscoring the importance of lateral transfer of symbiosis traits as an important evolutionary force among rhizobia of the Cape Fynbos biome. The extensive exchange of symbiosis genes in the Fynbos is in contrast with a lack of significant events of HGT among Burkholderia symbionts from the South American Cerrado and Caatinga biome. Furthermore, homologous recombination among selected housekeeping genes had a substantial impact on sequence evolution within Burkholderia and Mesorhizobium. Finally, phylogenetic analyses of the non-symbiosis acdS gene in Mesorhizobium, a gene often located on symbiosis islands, revealed distinct relationships compared to the chromosomal and symbiosis genes, suggesting a different evolutionary history and independent events of gene transfer. The observed events of HGT and incongruence between different genes necessitate caution in interpreting topologies from individual data types. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Caracterização biométrica, física e química de frutos da palmeira bocaiuva Acrocomia aculeata (Jacq Lodd

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Eliana Janet Sanjinez-Argandoña

2011-09-01

Full Text Available Frutos de palmeira bocaiuva (Acrocomia aculeata (Jacq. Lodd., coletados em Dourados (MS e Presidente Epitácio (SP, foram analisados quanto ao aspecto biométrico, a composição química e as características físicas, visando a avaliar seu potencial alimentício. Os frutos de bocaiuva das regiões de procedência não apresentaram diferenças significativas entre si nas características biométricas. O rendimento médio da polpa foi de 42% em relação ao fruto inteiro, sendo superior ao encontrado na literatura para outros frutos de palmeiras. As determinações físicas e químicas da polpa dos frutos das regiões de Mato Grosso do Sul e São Paulo caracterizam a polpa como sendo pouco ácida (pH 5,70 a 6,29. As amostras de Dourados - MS, foram consideradas mais doces (14,53% de açúcares redutores totais e com maior teor de vitamina C (34,57 mg.100 g-1 em relação às amostras de Presidente Epitácio-SP (11,46 mg.100 g-1. Porém, a intensidade da cor amarelo-laranja foi maior na polpa dos frutos de Presidente Epitácio (SP, sugerindo maior conteúdo de carotenoides.

基于Biome-BGC模型的西双版纳橡胶林碳收支模拟%Simulation of carbon budget in rubber plantations in Xishuangbanna based on the Biome-BGC model

Institute of Scientific and Technical Information of China (English)

孙燕瓷; 马友鑫; 曹坤芳; 沈金祥; 张一平; 梅岑岑; 刘文俊

2017-01-01

以西双版纳橡胶适宜种植区(海拔550-600m)的橡胶林(Hevea brasiliensis)为研究对象,应用参数同化后的Biome-BGC模型模拟了1959-2012年橡胶林的碳循环.结果表明,(1)与涡度相关监测结果相比,橡胶林年总初级生产力(Gross Primary Productivity,GPP)、年总呼吸(Total Respiration,Rt)的模拟精度分别为98.37％和90％.由于对年GPP的过低估计和对年Rt的过高估计,年净生态系统交换量(Net Ecosystem Exchange,NEE)的模拟值比实测值低157.35 g C m-2 a-1.但若考虑干胶碳(139gCm-2a-1),模拟值与实测值十分接近;(2)橡胶林在模拟进行的前8年里因异养呼吸较高,以碳排放为主,NEE平均约357 gC m-2a-1;之后转为以碳固定为主,NEE平均约-146 g C m-2a-1;(3)橡胶林在40年的更新周期中可固定碳1835 g C m-2,是一个弱的碳汇.但与热带雨林相同周期固碳6720 g C m-2相比,仍为碳源.以上结果为深入了解橡胶种植对区域碳循环的影响提供了科学依据,建议当地政府一方面要有计划的对老胶林进行更新,以维持当前橡胶林生态系统中的碳平衡;另一方面要注重对热带雨林的保护,从而实现区域经济和生态环境保护的协调发展.%The carbon (C) cycle in rubber plantations,which are located in a suitable planting region (altitude 550-600 m) in Xishuangbanna,was simulated using the Biome-BGC model for the period 1959-2012.We obtained the following results.(1) Compared with the actual measurements,the accuracy was 98.37％ and 90％ for the simulated annual gross primary productivity (GPP) and total respiration (Rt),respectively.Because of an underestimate of GPP and an overestimate of Rt,the simulated annual net ecosystem exchange (NEE) was 157.35 g C m-2 a-1 lower than the measured value.However,the accuracy was greatly enhanced when dry rubber C stock (139 g C m-2 a-1) was taken into account.(2) During the initial 8 years,rubber plantation acted as a C source because of the higher

An estimate of the terrestrial carbon budget of Russia using inventory-based, eddy covariance and inversion methods

Directory of Open Access Journals (Sweden)

A. J. Dolman

2012-12-01

Full Text Available We determine the net land to atmosphere flux of carbon in Russia, including Ukraine, Belarus and Kazakhstan, using inventory-based, eddy covariance, and inversion methods. Our high boundary estimate is −342 Tg C yr⁻¹ from the eddy covariance method, and this is close to the upper bounds of the inventory-based Land Ecosystem Assessment and inverse models estimates. A lower boundary estimate is provided at −1350 Tg C yr⁻¹ from the inversion models. The average of the three methods is −613.5 Tg C yr⁻¹. The methane emission is estimated separately at 41.4 Tg C yr⁻¹.

These three methods agree well within their respective error bounds. There is thus good consistency between bottom-up and top-down methods. The forests of Russia primarily cause the net atmosphere to land flux (−692 Tg C yr⁻¹ from the LEA. It remains however remarkable that the three methods provide such close estimates (−615, −662, −554 Tg C yr^–1 for net biome production (NBP, given the inherent uncertainties in all of the approaches. The lack of recent forest inventories, the few eddy covariance sites and associated uncertainty with upscaling and undersampling of concentrations for the inversions are among the prime causes of the uncertainty. The dynamic global vegetation models (DGVMs suggest a much lower uptake at −91 Tg C yr⁻¹, and we argue that this is caused by a high estimate of heterotrophic respiration compared to other methods.

A multi-biome gap in understanding of crop and ecosystem responses to elevated CO2.

Science.gov (United States)

Leakey, Andrew D B; Bishop, Kristen A; Ainsworth, Elizabeth A

2012-06-01

A key finding from elevated [CO(2)] field experiments is that the impact of elevated [CO(2)] on plant and ecosystem function is highly dependent upon other environmental conditions, namely temperature and the availability of nutrients and soil moisture. In addition, there is significant variation in the response to elevated [CO(2)] among plant functional types, species and crop varieties. However, experimental data on plant and ecosystem responses to elevated [CO(2)] are strongly biased to economically and ecologically important systems in the temperate zone. There is a multi-biome gap in experimental data that is most severe in the tropics and subtropics, but also includes high latitudes. Physiological understanding of the environmental conditions and species found at high and low latitudes suggest they may respond differently to elevated [CO(2)] than well-studied temperate systems. Addressing this knowledge gap should be a high priority as it is vital to understanding 21st century food supply and ecosystem feedbacks on climate change. Published by Elsevier Ltd.

Evolution in Australia's mesic biome under past and future climates: Insights from a phylogenetic study of the Australian Rock Orchids (Dendrobium speciosum complex, Orchidaceae).

Science.gov (United States)

Simpson, Lalita; Clements, Mark A; Crayn, Darren M; Nargar, Katharina

2018-01-01

The Australian mesic biome spans c. 33° of latitude along Australia's east coast and ranges and is dissected by historical and contemporary biogeographical barriers. To investigate the impact of these barriers on evolutionary diversification and to predict the impact of future climate change on the distribution of species and genetic diversity within this biome, we inferred phylogenetic relationships within the Dendrobium speciosum complex (Orchidaceae) across its distribution and undertook environmental niche modelling (ENM) under past, contemporary and projected future climates. Neighbor Joining tree inference, NeighborNet and Structure analyses of Amplified Fragment Length Polymorphism (AFLP) profiles for D. speciosum sampled from across its distribution showed that the complex consists of two highly supported main groups that are geographically separated by the St. Lawrence gap, an area of dry sclerophyll forest and woodland. The presence of several highly admixed individuals identified by the Structure analysis provided evidence of genetic exchange between the two groups across this gap. Whereas previous treatments have recognised between one to eleven species, the molecular results support the taxonomic treatment of the complex as a single species with two subspecies. The ENM analysis supported the hypothesis that lineage divergence within the complex was driven by past climatic changes. The St. Lawrence gap represented a stronger biogeographic barrier for the D. speciosum complex during the cool and dry glacial climatic conditions of the Pleistocene than under today's interglacial conditions. Shallow genetic divergence was found within the two lineages, which mainly corresponded to three other biogeographic barriers: the Black Mountain Corridor, Glass House Mountains and the Hunter Valley. Our ENM analyses provide further support for the hypothesis that biogeographic barriers along Australia's east coast were somewhat permeable to genetic exchange due to

Oxidative stress markers in fish (Astyanax sp. and Danio rerio) exposed to urban and agricultural effluents in the Brazilian Pampa biome.

Science.gov (United States)

Costa-Silva, D G; Nunes, M E M; Wallau, G L; Martins, I K; Zemolin, A P P; Cruz, L C; Rodrigues, N R; Lopes, A R; Posser, T; Franco, J L

2015-10-01

Aquatic ecosystems are under constant risk due to industrial, agricultural, and urban activities, compromising water quality and preservation of aquatic biota. The assessment of toxicological impacts caused by pollutants to aquatic environment using biomarker measurements in fish can provide reliable data to estimate sublethal effects posed by chemicals in contaminated areas. In this study, fish (Astyanax sp. and Danio rerio) exposed to agricultural and urban effluents at the Vacacaí River, Brazil, were tested for potential signs of aquatic contamination. This river comprehends one of the main watercourses of the Brazilian Pampa, a biome with a large biodiversity that has been neglected in terms of environmental and social-economic development. Sites S1 and S2 were chosen by their proximity to crops and wastewater discharge points, while reference site was located upstream of S1 and S2, in an apparently non-degraded area. Fish muscle and brain tissues were processed for determination of acetylcholinesterase as well as oxidative stress-related biomarkers. The results showed signs of environmental contamination, hallmarked by significant changes in cholinesterase activity, expression of metallothionein, antioxidant enzymes, glutathione levels, and activation of antioxidant/cell stress response signaling pathways in fish exposed to contaminated sites when compared to reference. Based on these results, it is evidenced that urban and agricultural activities are posing risk to the environmental quality of water resources at the studied area. It is also demonstrated that cell stress biomarkers may serve as important tools for biomonitoring and development of risk assessment protocols in the Pampa biome.

Diversity of herbaceous plants and bacterial communities regulates soil resistome across forest biomes.

Science.gov (United States)

Hu, Hang-Wei; Wang, Jun-Tao; Singh, Brajesh K; Liu, Yu-Rong; Chen, Yong-Liang; Zhang, Yu-Jing; He, Ji-Zheng

2018-04-24

Antibiotic resistance is ancient and prevalent in natural ecosystems and evolved long before the utilization of synthetic antibiotics started, but factors influencing the large-scale distribution patterns of natural antibiotic resistance genes (ARGs) remain largely unknown. Here, a large-scale investigation over 4000 km was performed to profile soil ARGs, plant communities and bacterial communities from 300 quadrats across five forest biomes with minimal human impact. We detected diverse and abundant ARGs in forests, including over 160 genes conferring resistance to eight major categories of antibiotics. The diversity of ARGs was strongly and positively correlated with the diversity of bacteria, herbaceous plants and mobile genetic elements (MGEs). The ARG composition was strongly correlated with the taxonomic structure of bacteria and herbs. Consistent with this strong correlation, structural equation modelling demonstrated that the positive effects of bacterial and herb communities on ARG patterns were maintained even when simultaneously accounting for multiple drivers (climate, spatial predictors and edaphic factors). These findings suggest a paradigm that the interactions between aboveground and belowground communities shape the large-scale distribution of soil resistomes, providing new knowledge for tackling the emerging environmental antibiotic resistance. © 2018 Society for Applied Microbiology and John Wiley & Sons Ltd.

An assessment of leaf-litter and epigaeic ants (Hymenoptera: Formicidae living in different landscapes of the Atlantic Forest Biome in the State of Bahia, Brazil

Directory of Open Access Journals (Sweden)

Roberta de Jesus Santos

2017-11-01

Full Text Available The Brazilian Atlantic Forest has a rich biodiversity increasingly threatened by human activities. Since the colonial period, the coast of the state of Bahia is among the most affected regions of Brazil by anthropic pressure. Bahia encloses Atlantic Forest remnants distributed in an area reaching 100-200 km along the east-west axis, by 1,000 km along the north-south axis, parallel to the coast of the Atlantic Ocean. We report hereafter the results of an intensive field survey of leaf litter and epigaeic ants realized in forest remnants of the Atlantic Forest landscapes within the original extension of the biome in 11 localities distributed along four degrees of latitude in the state of Bahia. In each site, 16 plots were collected using pitfall and eight using Winkler traps. We identified 391 ant species belonging to 71 genera and nine subfamilies. Among all species recorded, 21 were common to the whole 11 localities, while 98 species were recorded in a single locality. This study highlights the richness and diversity of epigaeic and leaf-litter ants living in the northern part of the Brazilian Atlantic Forest, and is one of the most representative soil ants’ inventories ever done in this biome for a single state of Brazil.

Comparison of modeling approaches for carbon partitioning: Impact on estimates of global net primary production and equilibrium biomass of woody vegetation from MODIS GPP

Science.gov (United States)

Ise, Takeshi; Litton, Creighton M.; Giardina, Christian P.; Ito, Akihiko

2010-12-01

Partitioning of gross primary production (GPP) to aboveground versus belowground, to growth versus respiration, and to short versus long-lived tissues exerts a strong influence on ecosystem structure and function, with potentially large implications for the global carbon budget. A recent meta-analysis of forest ecosystems suggests that carbon partitioning to leaves, stems, and roots varies consistently with GPP and that the ratio of net primary production (NPP) to GPP is conservative across environmental gradients. To examine influences of carbon partitioning schemes employed by global ecosystem models, we used this meta-analysis-based model and a satellite-based (MODIS) terrestrial GPP data set to estimate global woody NPP and equilibrium biomass, and then compared it to two process-based ecosystem models (Biome-BGC and VISIT) using the same GPP data set. We hypothesized that different carbon partitioning schemes would result in large differences in global estimates of woody NPP and equilibrium biomass. Woody NPP estimated by Biome-BGC and VISIT was 25% and 29% higher than the meta-analysis-based model for boreal forests, with smaller differences in temperate and tropics. Global equilibrium woody biomass, calculated from model-specific NPP estimates and a single set of tissue turnover rates, was 48 and 226 Pg C higher for Biome-BGC and VISIT compared to the meta-analysis-based model, reflecting differences in carbon partitioning to structural versus metabolically active tissues. In summary, we found that different carbon partitioning schemes resulted in large variations in estimates of global woody carbon flux and storage, indicating that stand-level controls on carbon partitioning are not yet accurately represented in ecosystem models.

华北地区油松林生态系统对气候变化和CO2浓度升高的响应——基于BIOME-BGC模型和树木年轮的模拟%Responses of Pinus tabulaeformis forest ecosystem in North China to climate change and elevated CO2 :A simulation based on BIOME-BGC model and tree-ring data

Institute of Scientific and Technical Information of China (English)

彭俊杰; 何兴元; 陈振举; 崔明星; 张先亮; 周长虹

2012-01-01

应用BIOME-BGC模型和树木年轮数据模拟1952-2008年华北地区典型油松林生态系统净初级生产力(NPP)动态,探究了树木径向生长和NPP对区域气候变暖的响应以及未来气候情景下油松林生态系统NPP动态变化.结果表明:1952-2008年,研究区油松林生态系统NPP波动于244.12 ～645.31 g C·m-2·a-1,平均值为418.6 g C·m-2·a-1.5-6月的平均温度和上年8月至当年7月的降水是限制该地区油松径向生长和油松林生态系统NPP的主要因子.研究期间,随着区域暖干化趋势的加强,树木径向生长和生态系统NPP均呈下降趋势.未来气候情景下,NPP对温度和降水的单独和复合变化的响应为正向.CO2浓度升高有利于油松林生态系统NPP的增加,CO2的施肥效应使NPP增加16.1％.在生态系统和区域水平,树木年轮是一种理想的指示生态系统动态变化的代用资料,可以检验和校正包括BIOME-BGC模型在内的各种生态系统过程模型.%Based on BIOME-BGC model and tree-ring data, a modeling study was conducted to estimate the dynamic changes of the net primary productivity ( NPP) of Pinus tabulaeformis forest ecosystem in North China in 1952-2008, and explore the responses of the radial growth and NPP to regional climate warming as well as the dynamics of the NPP in the future climate change scenarios. The simulation results indicated the annual NPP of the P. tabulaeformis ecosystem in 1952-2008 fluctuated from 244. 12 to 645. 31 g C · m-2 · a-1, with a mean value of 418. 6 g C · m-2 · a-1. The mean air temperature in May-June and the precipitation from previous August to current July were the main factors limiting the radial growth of P. tabulaeformis and the NPP of P. tabulaeformis ecosystem. In the study period, both the radial growth and the NPP presented a decreasing trend due to the regional warming and drying climate condition. In the future climate scenarios, the NPP would have positive responses to the

Genetic structure of Pilosocereus gounellei (Cactaceae) as revealed by AFLP marker to guide proposals for improvement and restoration of degraded areas in Caatinga biome.

Science.gov (United States)

Monteiro, E R; Strioto, D K; Meirelles, A C S; Mangolin, C A; Machado, M F P S

2015-12-15

Amplified fragment length polymorphism (AFLP) analysis was used to evaluate DNA polymorphism in Pilosocereus gounellei with the aim of differentiating samples grown in different Brazilian semiarid regions. Seven primer pairs were used to amplify 703 AFLP markers, of which 700 (99.21%) markers were polymorphic. The percentage of polymorphic markers ranged from 95.3% for the primer combination E-AAG/M-CTT to 100% for E-ACC/M-CAT, E-ACC/M-CAA, E-AGC/M-CAG, E-ACT/M-CTA, and E-AGG/M-CTG. The largest number of informative markers (126) was detected using the primer combination E-AAC/M-CTA. Polymorphism of the amplified DNA fragments ranged from 72.55% (in sample from Piauí State) to 82.79% (in samples from Rio Grande Norte State), with an average of 75.39%. Despite the high genetic diversity of AFLP markers in xiquexique, analysis using the STRUCTURE software identified relatively homogeneous clusters of xiquexique from the same location, indicating a differentiation at the molecular level, among the plant samples from different regions of the Caatinga biome. The AFLP methodology identified genetically homogeneous and contrasting plants, as well as plants from different regions with common DNA markers. Seeds from such plants can be used for further propagation of plants for establishment of biodiversity conservation units and restoration of degraded areas of the Caatinga biome.

Temporal and spatial heterogeneity analysis of optimal value of sensitive parameters in ecological process model: The BIOME-BGC model as an example%生态过程模型敏感参数最优取值的时空异质性分析——以BIOME-BGC模型为例

Institute of Scientific and Technical Information of China (English)

李一哲; 张廷龙; 刘秋雨; 李英

2018-01-01

The ecological process models are powerful tools for studying terrestrial ecosystem water and carbon cycle at present.However,there are many parameters for these models,and weather the reasonable values of these parameters were taken,have important impact on the models simulation results.In the past,the sensitivity and the optimization of model parameters were analyzed and discussed in many researches.But the temporal and spatial heterogeneity of the optimal parameters is less concerned.In this paper,the BIOME-BGC model was used as an example.In the evergreen broad-leaved forest,deciduous broad-leaved forest and C3 grassland,the sensitive parameters of the model were selected by constructing the sensitivity judgment index with two experimental sites selected under each vegetation type.The objective function was constructed by using the simulated annealing algorithm combined with the flux data to obtain the monthly optimal values of the sensitive parameters at each site.Then we constructed the temporal heterogeneity judgment index,the spatial heterogeneity judgment index and the temporal and spatial heterogeneity judgment index to quantitatively analyze the temporal and spatial heterogeneity of the optimal values of the model sensitive parameters.The results showed that the sensitivity of BIOME-BGC model parameters was different under different vegetation types,but the selected sensitive parameters were mostly consistent.The optimal values of the sensitive parameters of BIOME-BGC model mostly presented time-space heterogeneity to different degrees which varied with vegetation types.The sensitive parameters related to vegetation physiology and ecology had relatively little temporal and spatial heterogeneity while those related to environment and phenology had generally larger temporal and spatial heterogeneity.In addition,the temporal heterogeneity of the optimal values of the model sensitive parameters showed a significant linear correlation with the spatial

[The effect of finoptin on the metabolism and pharmacological action of cyclophosphane in vivo and in vitro].

Science.gov (United States)

Donenko, F V; Chikvashvili, B Sh; Borovkova, N B; Devichenskiĭ, V M; Kabieva, A O; Korneva, E N; Telegin, L Iu; Shcherbakov, V M; Letiagin, V P; Moroz, L V

1991-03-01

Phynoptin (Ph) and cyclophosphamide (CP) gave rise to a type I spectral changes with liver microsomal fraction. KS were 15 microM and 2150 microM, respectively. Ph increases the concentration of NBP product(s) of CP and acrolein in the blood plasma of animals. Ph increases a toxicity of CP. LD50 was 388.0 +/- 13.9 mg/kg for CP and LD50 was 342.8 +/- 16.9 mg/kg for CP in combination with Ph. Ph changes a therapeutic action of CP in mice with hemocytoblastosis La. Pharmacokinetic interactions have been demonstrated between calcium antagonists Ph and CP.

L-3-n-Butylphthalide Protects HSPB8 K141N Mutation-Induced Oxidative Stress by Modulating the Mitochondrial Apoptotic and Nrf2 Pathways

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Xiao-Dong Yang

2017-07-01

Full Text Available Charcot–Marie–Tooth disease (CMT, also known as hereditary motor and sensory neuropathy, is the most common inherited peripheral nerve disorder. Missense mutations, such as K141N, in the small heat shock protein HSPB8 are known to cause distal hereditary motor neuropathy 2A (dHMN2A or Charcot-Marie-Tooth neuropathy type 2L (CMT2L. However, of critical clinical significance, very few specific therapies for this disease exist. In the present study, we investigated the impact of mutant K141N HSPB8 on mitochondrial distribution and function in a cellular model of CMT2L. Our results indicate that K141N HSPB8 induced mitochondrial aggregation and caused increased oxidative stress injury. As an extraction from Chinese celery Apium graveolens Linn seeds, L-3-n-Butylphthalide (NBP, has been reported to exert many neuroprotective effects, we interrogated whether NBP could elicit a protective effect on the cell injury typically caused by HSPB8 K141N mutations. We found NBP could reverse the pathological processes induced by HSPB8 K141N mutation via an antioxidant effect, modulation of the Bax/Bcl-2 mitochondrial apoptotic and Nrf2 pathways. We propose a novel function of HSPB8, highlighting the consequence of the K141N pathogenic mutation. Furthermore, we suggest NBP may have promising therapeutic potential in the treatment of CMT2L.

PERMANENCE OF WATER EFFECTIVENESS IN THE ROOT ZONE OF THE CAATINGA BIOME

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CARLOS ALEXANDRE GOMES COSTA

2016-01-01

Full Text Available Soil is an important water compartment into a watershed scale, mainly due to its role in providing water to plants and to the influence of antecedent moisture on the runoff initiation. The aim of this research is to assess the permanence of water effectiveness in the soil under preserved-vegetation constraints in the Caatinga biome, in the semiarid northeastern Brazil. For this purpose, hourly soil moisture measurements were collected with TDR and analyzed between 2003 and 2010 for three soil-vegetation associations in the Aiuaba Experimental Basin. The results showed that in nine months per year soil moisture was below wilting point for two associations, whose soils are Chromic Luvisol and Haplic Lixisol (Abruptic. In the third association, where the shallow soil Lithic Leptosol prevails, water was found non-effective four months per year. A possible reason for the high water permanence in the shallowest soil is the percolation process, generating sub-surface flow, which barely occurs in the deeper soils. In situ observations indicates that the long period of soil moisture below the wilting point was not enough to avoid the blooming season of the Caatinga vegetation during the rainy periods. Indeed, after the beginning of each rainy season, there is a growth of dense green vegetation, regardless of the long period under water shortage.

Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study.

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Crowther, Thomas W; Maynard, Daniel S; Leff, Jonathan W; Oldfield, Emily E; McCulley, Rebecca L; Fierer, Noah; Bradford, Mark A

2014-09-01

The consequences of deforestation for aboveground biodiversity have been a scientific and political concern for decades. In contrast, despite being a dominant component of biodiversity that is essential to the functioning of ecosystems, the responses of belowground biodiversity to forest removal have received less attention. Single-site studies suggest that soil microbes can be highly responsive to forest removal, but responses are highly variable, with negligible effects in some regions. Using high throughput sequencing, we characterize the effects of deforestation on microbial communities across multiple biomes and explore what determines the vulnerability of microbial communities to this vegetative change. We reveal consistent directional trends in the microbial community response, yet the magnitude of this vegetation effect varied between sites, and was explained strongly by soil texture. In sandy sites, the difference in vegetation type caused shifts in a suite of edaphic characteristics, driving substantial differences in microbial community composition. In contrast, fine-textured soil buffered microbes against these effects and there were minimal differences between communities in forest and grassland soil. These microbial community changes were associated with distinct changes in the microbial catabolic profile, placing community changes in an ecosystem functioning context. The universal nature of these patterns allows us to predict where deforestation will have the strongest effects on soil biodiversity, and how these effects could be mitigated. © 2014 John Wiley & Sons Ltd.

Desempenho e medidas biométricas de caprinos de diferentes grupos raciais Performance and body measurements of purebred and crossbred goat kids at different ages

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Jakilane Jacque Leal de Menezes

2007-06-01

Full Text Available Objetivou-se avaliar o desempenho de cabritos de três grupos raciais. Foram considerados nas avaliações o peso, o ganho de peso, as medidas biométricas, a conversão alimentar e o custo de produção relativo à alimentação. Utilizaram-se 41 cabritos, machos e fêmeas, de três grupos raciais (A - Alpino; ½ BA - ½ Boer + ½ Alpino; e ¾ BA - ¾ Boer + ¼ Alpino, avaliados aos 60, 90 e 120 dias em sistema de confinamento. As médias foram comparadas por análise de variância utilizando-se o teste Tukey. O desempenho não diferiu entre os grupos raciais. O escore corporal foi maior nos animais ¾ BA, o que pode representar vantagem econômica ao produtor se esses animais forem comercializados vivos. Com o avanço da idade, houve aumento do comprimento corporal, da altura anterior, da altura posterior, do perímetro torácico, do perímetro da perna, da largura da garupa e da largura do peito. Os machos foram superiores às fêmeas quanto às medidas biométricas e quanto ao peso ao nascimento, aos 60 e aos 90 dias. Os machos Alpinos foram mais pesados aos 120 dias e apresentaram, ainda, maior ganho de peso no intervalo dos 30 aos 60 dias. O menor custo de produção relativo à alimentação por quilograma de cabrito produzido foi observado aos 90 dias de idade.The objective of this trial was to evaluate performance (weight and weight gain, body measurements, feed conversion, and production costs of purebred (Alpine and crossbred [½ Boer + ½ Alpine (½ BA and ¾ Boer + ¼ Alpine (¾ BA] goat kids at different ages (60, 90 and 120 days. Therefore, 41 kids in a feedlot system were used in this study. Data were submitted to analysis of variance using the Tukey test for comparison of means. No difference in performance was observed among the three different groups of animals (Alpine, ½ BA, and ¾ BA. Body condition score was greatest in ¾ BA kids, which may represent additional profit to producers if animals are sold alive. As expected

Spatially Explicit Estimation of Optimal Light Use Efficiency for Improved Satellite Data Driven Ecosystem Productivity Modeling

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Madani, N.; Kimball, J. S.; Running, S. W.

2014-12-01

Remote sensing based light use efficiency (LUE) models, including the MODIS (MODerate resolution Imaging Spectroradiometer) MOD17 algorithm are commonly used for regional estimation and monitoring of vegetation gross primary production (GPP) and photosynthetic carbon (CO2) uptake. A common model assumption is that plants in a biome matrix operate at their photosynthetic capacity under optimal climatic conditions. A prescribed biome maximum light use efficiency parameter defines the maximum photosynthetic carbon conversion rate under prevailing climate conditions and is a large source of model uncertainty. Here, we used tower (FLUXNET) eddy covariance measurement based carbon flux data for estimating optimal LUE (LUEopt) over a North American domain. LUEopt was first estimated using tower observed daily carbon fluxes, meteorology and satellite (MODIS) observed fraction of photosynthetically active radiation (FPAR). LUEopt was then spatially interpolated over the domain using empirical models derived from independent geospatial data including global plant traits, surface soil moisture, terrain aspect, land cover type and percent tree cover. The derived LUEopt maps were then used as primary inputs to the MOD17 LUE algorithm for regional GPP estimation; these results were evaluated against tower observations and alternate MOD17 GPP estimates determined using Biome-specific LUEopt constants. Estimated LUEopt shows large spatial variability within and among different land cover classes indicated from a sparse North American tower network. Leaf nitrogen content and soil moisture are two important factors explaining LUEopt spatial variability. GPP estimated from spatially explicit LUEopt inputs shows significantly improved model accuracy against independent tower observations (R2 = 0.76; Mean RMSE plant trait information can explain spatial heterogeneity in LUEopt, leading to improved GPP estimates from satellite based LUE models.

Assessing Effect of Manure and Chemical Fertilizer on Net Primary Production, Soil Respiration and Carbon Budget in Winter Wheat (Triticum aestivum L. Ecosystem under Mashhad Climatic Condition

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Y alizade

2018-02-01

F2 and the lowest was observed in control plot with 5.1 and 5.2 for first and second years, respectively. The trend of CO2 flux as 250, 220, 200, 170, 160 and 155 mg C m-2 h-1 was gained in the F-M, M, F2, F1 and root-excluded plots, respectively. In general, manure treatments had the highest heterotrophic respiration. The highest of annual soil respiration and heterotrophic respiration were also in M-F treatment with 3257 and 1150 kgC ha-1 for the first year and 3310, 1250 kgC ha-1 in second year, respectively. The annual NPP was 5000 and 5000 kgC ha-1 year-1 for M-F, 5077 and 5100 kgC ha-1 year-1 in F1 and 2065 and 1865 kgC ha-1 year-1 for the control treatment in 2010 and 2011, respectively. The range of annual net biome production (NBP in the fertilizer and control treatments ranged from -400 to -150 kg C ha-1 year-1, suggesting the loss of carbon in the field. On the other hand, NBP in the M was 1400 and 1200 kgC ha-1 year-1 in 2010 and 2011, respectively and the M-F was 1300 and 1100 kgC ha-1 year-1 in 2010 and 2011, respectively. Conclusion The results of this experiment showed that in the wheat ecosystem, the carbon emission is higher than the carbon entry into the soil. The results also indicated that manure application in agro-ecosystems is a necessary approach to mitigate carbon losses in the winter wheat ecosystem and the results indicated a high correlation (> 0.9 between soil temperature and CO2 flux which was positive and exponential. Soil respiration increased under the influence of fertilizer treatments (both chemical fertilizer and manure but, the main reason for the increased soil respiration under application of chemical fertilizers was autotrophic respiration. While both respiration of autotrophic and heterotrophic increased in manure treatment.

A mesic maximum in biological water use demarcates biome sensitivity to aridity shifts.

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Good, Stephen P; Moore, Georgianne W; Miralles, Diego G

2017-12-01

Biome function is largely governed by how efficiently available resources can be used and yet for water, the ratio of direct biological resource use (transpiration, E T ) to total supply (annual precipitation, P) at ecosystem scales remains poorly characterized. Here, we synthesize field, remote sensing and ecohydrological modelling estimates to show that the biological water use fraction (E T /P) reaches a maximum under mesic conditions; that is, when evaporative demand (potential evapotranspiration, E P ) slightly exceeds supplied precipitation. We estimate that this mesic maximum in E T /P occurs at an aridity index (defined as E P /P) between 1.3 and 1.9. The observed global average aridity of 1.8 falls within this range, suggesting that the biosphere is, on average, configured to transpire the largest possible fraction of global precipitation for the current climate. A unimodal E T /P distribution indicates that both dry regions subjected to increasing aridity and humid regions subjected to decreasing aridity will suffer declines in the fraction of precipitation that plants transpire for growth and metabolism. Given the uncertainties in the prediction of future biogeography, this framework provides a clear and concise determination of ecosystems' sensitivity to climatic shifts, as well as expected patterns in the amount of precipitation that ecosystems can effectively use.

SOIL ORGANIC MATTER FRACTIONS IN PRESERVED AND DISTURBED WETLANDS OF THE CERRADO BIOME

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Ricardo Fernandes de Sousa

2015-02-01

Full Text Available Veredas are humid tropical ecosystems, generally associated to hydromorphic soils and a shallow water table. The soils of these ecosystems are affected by the use of the areas around these veredas. The objective of this study was to determine soil organic matter (SOM fractions in veredas adjacent to preserved (native savanna and disturbed environments (agricultural areas and pastures in the Cerrado biome. Soil samples were collected from the 0-10 and 10-20 cm layers along reference lines drawn along the relief following the upper, middle and lower positions of one of the slopes, in the direction of the draining line of the vereda. The soil analysis determined: total soil OC, total nitrogen and C:N ratio; C and N contents and C:N ratio in particulate and mineral-associated fractions (of SOM; fulvic acids, humic acids and humin fractions and ratio between humic and fulvic acids. The agricultural use around the veredas induced changes in the SOM fractions, more pronounced in the lower part of the slope. In the soil surface of this part, the OC levels in the humic substances and the particulate fraction of SOM, as well as total soil OC were reduced in the vereda next to crop fields.

Soil Loss Vulnerability in an Agricultural Catchment in the Atlantic Forest Biome in Southern Brazil

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Rafael Gotardo

2016-11-01

Full Text Available This study estimates soil loss vulnerability using field samples and spatial data in a 30 km² area in the Atlantic forest biome in southern Brazil. The anthropogenic part of the landscape consists mainly of small agricultural properties. Soil loss vulnerability was calculated using adaptations of the universal soil loss equation. The results were compared to sediment data collected during field surveys. Spatial analysis was performed using a geographical information system (GIS and fine resolution data (1 m. Both field and spatial analyses produced similar results, 5.390 tons of soil loss per year using field data and 5.691 tons per year using GIS. Using soil loss and sediment data related to the Concordia River, we estimate that of all the exported sediment 25% of the lost soil reaches the river. These data are an effective source of information for municipal administrators of the region, which consists of small agricultural catchments (dominated by small properties that comprise the regional economy. A thematic map was used to determine sub-drainage priority as information for public managers.

Estudio biométrico ocular en una población adulta del estado de Sinaloa

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Juliana Marcela Morales Avalos

2016-01-01

Resultados: Se incluyeron 304 ojos con un rango de edad de 29-98 años con una media de 68 años. La distribución por género fue del 53.94% (164 ojos para el género femenino y del 46.05% (140 ojos para el género masculino. El 51.31% (156 ojos fueron derechos y el 48.68% (148 ojos fueron izquierdo. Los resultados de los valores biométricos fueron: profundidad de cámara anterior, rango 2.39-4.6 con promedio de 3.14 mm; espesor de cristalino, rango 2.49-5.42 con promedio de 3.65 mm; profundidad de cámara vítrea, rango de 13.69-19.59 con promedio de 16.28 mm; y la longitud anteroposterior con rango 20.18-27.3 con promedio de 23.09 mm; el promedio del poder dióptrico deseado para emetropía del lente intraocular es de 22.40 dioptrías.

Regional Atmospheric CO2 Inversion Reveals Seasonal and Geographic Differences in Amazon Net Biome Exchange

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Alden, Caroline B.; Miller, John B.; Gatti, Luciana V.; Gloor, Manuel M.; Guan, Kaiyu; Michalak, Anna M.; van der Laan-Luijkx, Ingrid; Touma, Danielle; Andrews, Arlyn; Basso, Luana G.;

Utilização de medidas biométricas para predizer características da carcaça de cabritos Saanen Utilization of biometric measures for prediction of Saanen goats carcass traits

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Enrique Alejandro Yáñez

2004-12-01

Full Text Available Foram determinadas medidas biométricas de caprinos leiteiros com o objetivo de estimar equações que permitam predizer o peso e as características da carcaça de animais sob diferentes condições nutricionais. Realizou-se um experimento em duas fases, utilizando-se 27 cabritos machos da raça Saanen em cada uma, distribuídos nos tratamentos: alimentação à vontade, 30 e 60% de restrição. O peso vivo (PV inicial foi de 5 kg na Fase 1 e 20 kg na Fase 2, abatendo-se os animais ao atingirem 20 e 35 kg de PV, respectivamente. Foram determinadas as medidas biométricas e avaliada a condição corporal no animal vivo e, após o abate e resfriamento de 24 horas, as medidas da carcaça. Estimaram-se o peso em jejum (PJ, o peso da carcaça fria (PCF e a compacidade da carcaça, em função das medidas biométricas. O perímetro torácico e o comprimento corporal foram as medidas biométricas que apresentaram melhor ajuste para estimar o PJ, o PCF e a compacidade da carcaça e, por isso, são recomendados, por serem precisos, práticos e de fácil execução.Biometric measures of dairy goats were taken to estimate equations for prediction of weight and carcass characteristics of animals with different nutritional conditions. An experiment was carried out into two phases, with 27 male Saanen goats at each one. The animals were assigned to the following feeding groups: ad libitum, 30 and 60% of restriction. The initial live weight (LW was 5 kg at the Phase 1 and 20 kg at the Phase 2, the animals were slaughtered when they reached 20 and 35 kg of LW, respectively. The biometric measurements and body conditions were determined when the animals were alive. After the slaughter and 24 hours of chilling, were evaluated the carcass characteristics. The fasted live weight (FLW, cold carcass weight (CCW and carcass compactness were estimated in function of the biometric measurements. Among the biometric measurements, thoracic perimeter and body length showed

Application of theory-based evaluation for the critical analysis of national biofuel policy: A case study in Malaysia.

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Abdul-Manan, Amir F N; Baharuddin, Azizan; Chang, Lee Wei

2015-10-01

Theory-based evaluation (TBE) is an effectiveness assessment technique that critically analyses the theory underlying an intervention. Whilst its use has been widely reported in the area of social programmes, it is less applied in the field of energy and climate change policy evaluations. This paper reports a recent study that has evaluated the effectiveness of the national biofuel policy (NBP) for the transport sector in Malaysia by adapting a TBE approach. Three evaluation criteria were derived from the official goals of the NBP, those are (i) improve sustainability and environmental friendliness, (ii) reduce fossil fuel dependency, and (iii) enhance stakeholders' welfare. The policy theory underlying the NBP has been reconstructed through critical examination of the policy and regulatory documents followed by a rigorous appraisal of the causal link within the policy theory through the application of scientific knowledge. This study has identified several weaknesses in the policy framework that may engender the policy to be ineffective. Experiences with the use of a TBE approach for policy evaluations are also shared in this report. Copyright © 2015 Elsevier Ltd. All rights reserved.

Adapting a rapid assessment protocol to environmentally assess palm swamp (Veredas) springs in the Cerrado biome, Brazil.

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Guimarães, Ariane; de Lima Rodrigues, Aline Sueli; Malafaia, Guilherme

2017-10-30

The exploitation and degradation of natural environments exert intense pressure on important ecosystems worldwide. Thus, it is necessary developing or adapting assessment methods to monitor environmental changes and to generate results to be applied to environmental management programs. The Brazilian Veredas (phytophysiognomies typical to the Cerrado biome) are threatened by several human activities; thus, the aim of the present study is to adapt a rapid assessment protocol (RAP) to be applied to Veredas springs, by using the upper course of the Vai-e-Vem stream watershed (Ipameri County, Goiás State, Brazil). Therefore, several springs in the study site were visited and 11 of them were considered Veredas springs. After the RAP was adapted, the instrument was validated and used to environmentally assess the springs in order to demonstrate its applicability. The present study has provided an instrument of option to monitor Veredas springs.

Circulation of canine parvovirus among dogs living in human-wildlife interface in the Atlantic forest biome, Brazil

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Flávia V. Vieira

2017-12-01

Full Text Available Despite of the role of domestic dogs as reservoirs for threatening viral diseases for wild carnivores, few studies have focused to identify circulation of viruses among dogs living in human/wildlife interfaces. To identify canine parvovirus (CPV types circulating in dogs living in an Atlantic forest biome, faecal samples (n = 100 were collected at the same period (one week corresponding to each of four areas, during 2014 to 2016 and corresponded to 100 different individuals. CPV was isolated in cell culture from 67 out 100 (67% samples from healthy dogs. Cytopathic effects were characterized by total or partial cell culture lysis. Genome sequences of CPV-2a (10%, CPV-2b (7% and CPV-2c (50% were concomitantly detected by PCR and nucleotide sequencing. The current study addresses the importance of monitoring CPV circulation among dogs presenting potential contact with wildlife species.

Níveis de alumínio e o desenvolvimento de porta-enxertos cítricos em cultivo hidropônico: I. Parâmetros biométricos

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Santos Carlos Henrique dos

1999-01-01

Full Text Available O presente trabalho teve como objetivo avaliar a influência de diferentes níveis de alumínio nos parâmetros biométricos dos porta-enxertos cítricos limoeiro Cravo e citrumeleiro Swingle em cultivo hidropônico. O experimento foi instalado em casa de vegetação em Botucatu, SP. Os tratamentos seguiram o delineamento estatístico inteiramente casualizado, com 3 repetições, em parcelas subdivididas. Os níveis de alumínio utilizados foram: 0; 7,5; 15; 22,5 e 30 mg L-1, na forma de AlCl3 6.H2O em solução nutritiva. Foram avaliados os parâmetros biométricos altura, número de folhas, diâmetro do caule, área foliar, comprimento e volume de raízes. De acordo com os resultados obtidos, conclui-se que o citrumeleiro Swingle apresentou-se mais sensível ao alumínio, sendo que, a partir de 7,5 mg L-1 houve redução nos valores destes parâmetros, enquanto que o limoeiro Cravo mostrou-se mais tolerante aos níveis de alumínio.

FLUXAPYROXAD IN THE ASIAN SOYBEAN RUST CONTROL IN THE CERRADO BIOME

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RAFAEL MENEZES SILVA DE FREITAS

2016-01-01

Full Text Available The etiologic agent of the Asian soybean rust is the Phakopsora pachyrhizi, which causes a reduction in the photosynthetic leaf area and, consequently, in the crop yield. Chemical control is one of the main measures for its management. The objective of this work was to evaluate the efficacy and selectivity of the fluxapyroxad fungicide on controlling the Asian soybean rust, under the edaphoclimatic conditions of the Cerrado biome. The experiment was conducted in an area under no-tillage system, in the Agricultural Research Center, Rio Verde, Goias, Brazil, during the 2012/2013 crop season, using the cultivar NA7337. A randomized block experimental design was used, with twelve treatments and four replications. The treatments consisted of applications of fluxapyroxad (FX, pyraclostrobin (PT, epoxiconazole (EX and metconazole (MZ. The average severity of the disease in the plants reached 37% in the Control. All treatments with fungicides differed from the Control. Treatments 9, 10, 11 and 12 provided the greatest rates of soybean rust control. The treatments 10, 11 and 12 had the highest thousand grain weights, and the yields of the treatments 2, 3 and 11, despite higher than the Control, were lower than the treatments 4, 5, 6, 7, 8, 9, 10 and 12, which had statistically equal yields. The increasing in yield, compared to the Control, ranged from 10.05% (pyraclostrobin, epoxiconazole + pyraclostrobin + mineral oil to 30.55% (pyraclostrobin, pyraclostrobin + fluxapyroxad + mineral oil and pyraclostrobin + metconazole + mineral oil. The highest rates of soybean rust control were presented by fungicides containing fluxapyroxad.

Land use changes after the period commodities rising price in the Rio Grande do Sul State, Brazil

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Vicente Celestino Pires Silveira

Full Text Available ABSTRACT: At the end of the 20th and early 21st century, agricultural systems incorporated definitively a new mission: to generate goods for a world population that continues to grow and whose way of life demand food with low environmental impact. Soybean is the main raw material for the production of biodiesel in Brazil, accountably responsible for 82.4% of the total produced between 2006 and 2013. The Brazilian state of Rio Grande do Sul (RS, which is formed by the Pampa and the Atlantic forest biomes, was responsible for 35.7% of the country's biodiesel production in the referred period. The aim of this paper was to verify the impact of the increased area of soybean cultivation in land use in Rio Grande do Sul State, in the period between 1990 and 2015, considering separately its two biomes (Pampa and Atlantic Forest original areas, using both census dataset and satellite images. We used the period from 1990 to 2000 as before commodity rising price (BCRP and the period from 2000 to 2013 as commodity rising price (CRP. The 505,162 ha from Atlantic Forest biome and 1,192,115ha from Pampa biome were added to soybean production in the CRP period. In the Atlantic Forest, this enlargement occurred in the border of the main production area, while in Pampa biome conversion of natural grassland to crop land was the main reason for the large increment in the cultivated area.

Biomímesis: una propuesta ética y técnica para reorientar la ingeniería por los senderos de la sustentabilidad

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Nicolás Jiménez Iguarán

2016-01-01

Full Text Available Nos encontramos en lo que el intelectual español Jorge Riechmann denomina “el siglo de la gran prueba”. La actual crisis ambiental, cuyos síntomas no dejan de aparecer, nos impone retos en todos los niveles de nuestra vida. El presente trabajo tiene el propósito de explorar las potencialidades que tiene la ingeniería para superar esta crisis (o “prueba”, a la luz de la categoría biomímesis. Para esto, partimos de una reflexión central sobre la correspondencia entre el saber técnico ingenieril, los límites de la naturaleza y la noción de progreso para, a partir de ella, realizar una crítica propositiva a la ingeniería e inferir algunos elementos éticos que encaminen su desarrollo. Como ciencia aplicada, la ingeniería forma parte de nuestras vidas así no seamos plenamente conscientes de ello. En su desarrollo y evolución ha contribuido a producir sobrecargas significativas en la biósfera. La ética ambiental ha venido insistiendo, durante más de cinco décadas, en la necesidad de reconducir nuestra civilización hacia técnicas aplicadas que aprendan de la naturaleza en lugar de degradarla. La biomímesis, al recordar que los resultados de la ingeniería deben estar asociados a un objetivo social colectivo, se presenta como un camino para superar esta compleja realidad.

Design and standardization of PCR primers and protocols for detection of clonal immunoglobulin and T-cell receptor gene recombinations in suspect lymphoproliferations: Report of the BIOMED-2 Concerted Action BMH4-CT98-3936

NARCIS (Netherlands)

van Dongen, J. J. M.; Langerak, A. W.; Brüggemann, M.; Evans, P. A. S.; Hummel, M.; Lavender, F. L.; Delabesse, E.; Davi, F.; Schuuring, E.; García-Sanz, R.; van Krieken, J. H. J. M.; Droese, J.; González, D.; Bastard, C.; White, H. E.; Spaargaren, M.; González, M.; Parreira, A.; Smith, J. L.; Morgan, G. J.; Kneba, M.; Macintyre, E. A.

2003-01-01

In a European BIOMED-2 collaborative study, multiplex PCR assays have successfully been developed and standardized for the detection of clonally rearranged immunoglobulin (Ig) and T-cell receptor (TCR) genes and the chromosome aberrations t(11; 14) and t(14; 18). This has resulted in 107 different

Design and standardization of PCR primers and protocols for detection of clonal immunoglobulin and T-cell receptor gene recombinations in suspect lymphoproliferations: report of the BIOMED-2 Concerted Action BMH4-CT98-3936.

NARCIS (Netherlands)

Dongen, J.J.M. van; Langerak, A.W.; Bruggemann, M.; Evans, P.; Hummel, M.; Lavender, F.L.; Delabesse, E.; Davi, F.; Schuuring, E.; Garcia-Sanz, R.; Krieken, J.H.J.M. van; Droese, J.; Gonzalez, D.; Bastard, C.; White, H.E.; Spaargaren, M.C.; Gonzalez, M.; Parreira, A.; Smith, J.L.; Morgan, G.J.; Kneba, M.; Macintyre, E.A.

2003-01-01

In a European BIOMED-2 collaborative study, multiplex PCR assays have successfully been developed and standardized for the detection of clonally rearranged immunoglobulin (Ig) and T-cell receptor (TCR) genes and the chromosome aberrations t(11;14) and t(14;18). This has resulted in 107 different

Deficiência, incapacidade e vulnerabilidade: do capacitismo ou a preeminência capacitista e biomédica do Comitê de Ética em Pesquisa da UFSC

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Anahi Guedes de Mello

Full Text Available Resumo A Antropologia cada vez mais tem questionado a hegemonia dos saberes biomédicos nos processos de revisão ética de projetos de pesquisa social atualmente vigente no Brasil, regulado pelo Comitê de Ética em Pesquisa com Seres Humanos de cada instituição sob os auspícios da Comissão Nacional de Ética em Pesquisa (CONEP, através da Resolução nº 196/1996 até então vigente no momento dessa pesquisa de campo. O objetivo deste trabalho é relatar e refletir sobre os percalços enfrentados para conseguir a aprovação, durante o ano de 2012, de meu projeto de pesquisa de mestrado pelo Comitê de Ética em Pesquisa com Seres Humanos da Universidade Federal de Santa Catarina (CEP/UFSC, em Florianópolis. Nessa experiência etnográfica observei, à luz da teoria crip, como se articulam as categorias ‘deficiência’, ‘vulnerabilidade’ e ‘incapacidade’ para revelar o capacitismo e a primazia do modelo biomédico dessa instância local reguladora da ética em pesquisa na UFSC quanto à participação e capacidade legal das pessoas com deficiência como sujeitos da pesquisa.

Main aspects of sunflower production in Brazil

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Castro Cesar

2018-01-01

Full Text Available Sunflower is one of the most important oilseed crops in the world, since its grains have high oil content (38% to 50%, primarily used for the production of high quality oil. The production of sunflower increases the supply of protein meal for animal feeding, which enables the increase of protein production, more specifically meat, eggs and milk. Grain production systems in Brazil have peculiarities, since two to three different crops are grown in a special arrangement, in the same area and year. Notwithstanding the small cultivated area in Brazil of 62.3 thousand hectares, sunflower is used in succession or rotation with other grain crops such as soybean or maize, showing an enormous potential for expansion and can be cultivated from latitudes 33°S to 5°N, especially in the Brazilian Cerrado biome. Sunflower cultivation in succession to soybean as a second summer crop can also reduce environmental impacts because of the more efficient usage of production factors, such as land and sharing of agricultural inputs, machinery, infrastructure and workforce. The success of establishing the sunflower is associated with the adequate management of soil fertility, use of cultivars adapted to different environments, plant arrangement, seed quality and adequate phytosanitary management, among other factors. It also needs strategic actions, planning and, long-term research and technology diffusion.

A QSPR STUDY OF NORMAL BOILING POINT OF ORGANIC COMPOUNDS (ALIPHATIC ALKANES USING MOLECULAR DESCRIPTORS

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B. Souyei

2013-12-01

Full Text Available A quantitative structure–property relationship (QSPR study is carried out to develop correlations that relate the molecular structures of organic compounds (Aliphatic Alkanes to their normal boiling point (NBP and two correlations were proposed for constitutionals and connectivity indices Models. The correlations are simple in application with good accuracy, which provide an easy, direct and relatively accurate way to calculate NBP. Such calculation gives us a model that gives results in remarkable correlations with the descriptors of blokes constitutionals (CON, and connectivity indices (CI (R2 = 0.950, δ = 0.766 (R2 = 0.969, δ = 0.782 respectively.

Global land-surface primary productivity based upon Nimbus-7 37 GHz data

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Choudhury, B. J.

1988-01-01

Accumulation and renewal of organic matter as quantified through net primary productivity (NPP) is considered a very major function of the biosphere, and its estimation is crucial in understanding the carbon cycle. A physically-based model relating NPP to the difference of vertically and horizontally polarized brightness temperatures (Delta T) observed at 37 GHz frequency of the scanning multichannel microwave radiometer on board the Nimbus-7 satellite is used for fitting areally averaged values of NPP and Delta T for five biomes. The land-surface NPP within 80 deg N to 55 deg S is then calculated using the Delta T data and compared with other estimates.

Requisitos uniformes para preparar los manuscritos enviados a revistas biomédicas

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1998-01-01

Full Text Available En 1978, un reducido grupo de directores de revistas médicas generales que se publican en inglés se reunió de manera informal en Vancouver (Canadá a fin de fijar normas con respecto al formato que deberían adoptar los manuscritos enviados a esas publicaciones. Este fue el inicio de lo que con el tiempo llegó a conocerse como el Grupo de Vancouver. Sus requisitos para la preparación de manuscritos, que incluían el formato de las referencias bibliográficas creado por la Biblioteca Nacional de Medicina de los Estados Unidos, se publicaron por vez primera en 1979. Con el paso del tiempo el Grupo de Vancouver creció y se convirtió en el Comité Internacional de Directores de Revistas Médicas (CIDRM, que se reúne una vez al año y que gradualmente ha venido ampliando los temas que le conciernen. El Comité ha producido cinco ediciones de los requisitos uniformes para preparar los manuscritos enviados a revistas biomédicas. A lo largo de los años han surgido asuntos que van más allá de la preparación del manuscrito. Algunos de esos asuntos se han incorporado a los requisitos uniformes, mientras que otros se tratan en declaraciones por separado. Cada declaración se ha publicado en una revista científica.

Social wasps (Polistinae from Pampa Biome: South Brazil, Northeastern Argentina and Uruguay

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Alexandre Somavilla

2017-08-01

Full Text Available Abstract. This study aimed to determine social wasps’ species from Pampa Biome. Were examined samples of social wasps from south-central of Rio Grande do Sul state (Brazil, parts of Buenos Aires, Entre Rios, Corrientes, Cordoba, Santa Fé and La Pampa provinces (Argentina and in Uruguay maintained in the Coleção Entomológica de Santa Cruz do Sul (Santa Cruz do Sul-Brazil, American Museum of Natural History (USA, Natural History Museum (London-United Kingdom and Muséum National d’Histoire Naturelle (Paris-France. Thirty species were recorded: Agelaia (01, Brachygastra (01, Mischocyttarus (04, Polistes (15, Polybia (08 and Protonectarina (01. Vespas sociais do Bioma Pampa: sul do Brasil, nordeste da Argentina e Uruguai. Resumo. Este estudo objetivou determinar as espécies de vespas sociais provenientes do Bioma Pampa. Foram examinadas vespas sociais provenientes de coletas da região centro-sul do Rio Grande do Sul (Brasil, parte das províncias de Buenos Aires, Entre Rios, Corrientes, Cordoba, Santa Fé e La Pampa (Argentina e Uruguai depositadas na Coleção Entomológica de Santa Cruz do Sul (Santa Cruz do Sul-Brasil, American Museum of Natural History (Nova Iorque-USA, Natural History Museum (Londres-Reino Unido e Muséum National d’Histoire Naturelle (Paris-França. Trinta espécies foram registradas: Agelaia (01, Brachygastra (01, Mischocyttarus (04, Polistes (15, Polybia (08 e Protonectarina (01.

On the causes of trends in the seasonal amplitude of atmospheric CO2.

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Piao, Shilong; Liu, Zhuo; Wang, Yilong; Ciais, Philippe; Yao, Yitong; Peng, Shushi; Chevallier, Frédéric; Friedlingstein, Pierre; Janssens, Ivan A; Peñuelas, Josep; Sitch, Stephen; Wang, Tao

2018-02-01

No consensus has yet been reached on the major factors driving the observed increase in the seasonal amplitude of atmospheric CO 2 in the northern latitudes. In this study, we used atmospheric CO 2 records from 26 northern hemisphere stations with a temporal coverage longer than 15 years, and an atmospheric transport model prescribed with net biome productivity (NBP) from an ensemble of nine terrestrial ecosystem models, to attribute change in the seasonal amplitude of atmospheric CO 2 . We found significant (p 50°N), consistent with previous observations that the amplitude increased faster at Barrow (Arctic) than at Mauna Loa (subtropics). The multi-model ensemble mean (MMEM) shows that the response of ecosystem carbon cycling to rising CO 2 concentration (eCO 2 ) and climate change are dominant drivers of the increase in AMP P -T and AMP T -P in the high latitudes. At the Barrow station, the observed increase of AMP P -T and AMP T -P over the last 33 years is explained by eCO 2 (39% and 42%) almost equally than by climate change (32% and 35%). The increased carbon losses during the months with a net carbon release in response to eCO 2 are associated with higher ecosystem respiration due to the increase in carbon storage caused by eCO 2 during carbon uptake period. Air-sea CO 2 fluxes (10% for AMP P -T and 11% for AMP T -P ) and the impacts of land-use change (marginally significant 3% for AMP P -T and 4% for AMP T -P ) also contributed to the CO 2 measured at Barrow, highlighting the role of these factors in regulating seasonal changes in the global carbon cycle. © 2017 John Wiley & Sons Ltd.

Responses of plant available water and forest productivity to variably layered coarse textured soils

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Huang, Mingbin; Barbour, Lee; Elshorbagy, Amin; Si, Bing; Zettl, Julie

2010-05-01

Reforestation is a primary end use for reconstructed soils following oil sands mining in northern Alberta, Canada. Limited soil water conditions strongly restrict plant growth. Previous research has shown that layering of sandy soils can produce enhanced water availability for plant growth; however, the effect of gradation on these enhancements is not well defined. The objective of this study was to evaluate the effect of soil texture (gradation and layering) on plant available water and consequently on forest productivity for reclaimed coarse textured soils. A previously validated system dynamics (SD) model of soil moisture dynamics was coupled with ecophysiological and biogeochemical processes model, Biome-BGC-SD, to simulate forest dynamics for different soil profiles. These profiles included contrasting 50 cm textural layers of finer sand overlying coarser sand in which the sand layers had either a well graded or uniform soil texture. These profiles were compared to uniform profiles of the same sands. Three tree species of jack pine (Pinus banksiana Lamb.), white spruce (Picea glauce Voss.), and trembling aspen (Populus tremuloides Michx.) were simulated using a 50 year climatic data base from northern Alberta. Available water holding capacity (AWHC) was used to identify soil moisture regime, and leaf area index (LAI) and net primary production (NPP) were used as indices of forest productivity. Published physiological parameters were used in the Biome-BGC-SD model. Relative productivity was assessed by comparing model predictions to the measured above-ground biomass dynamics for the three tree species, and was then used to study the responses of forest leaf area index and potential productivity to AWHC on different soil profiles. Simulated results indicated soil layering could significantly increase AWHC in the 1-m profile for coarse textured soils. This enhanced AWHC could result in an increase in forest LAI and NPP. The increased extent varied with soil

Sensibility and time heterogeneity of Biome-BGC model parameters%Biome-BGC模型参数的敏感性和时间异质性

Institute of Scientific and Technical Information of China (English)

刘秋雨; 张廷龙; 孙睿; 王博闻; 叶欣欣; 李一哲

2017-01-01

生态过程模型为研究陆表生态系统水、碳、氮等物质的循环提供了一种有效的手段.模型与数据同化结合可建立模拟与观测之间的桥梁,同时提高模型与观测两种方法揭示地表真实状况的有效性.但模型参数的特性,将直接影响到模型模拟及数据同化的精度.传统观念认为,生态过程模型参数在相同植被类型条件下是固定不变的,但近期研究已开始关注其时空异质性.本文以Biome-BGC模型为例,利用美国哈佛森林Environmental Monitoring Site (EMS)通量观测站的相关数据,对哈佛森林地区水、碳通量进行模拟.首先对模型参数进行敏感性分析;然后应用模拟退火算法,构造目标函数,使待优化的敏感参数在合理阈值范围内不断变动反复迭代,获取逐月的最优参数值;通过引入变异系数,对敏感参数的时间异质性进行分析.结果表明:生态过程模型参数最优值并非常量,而会随时间表现出异质性,而且各参数时间异质性大小差异显著.文中对Biome-BGC模型的敏感参数按时间异质性大小划分了相应的等级.研究结果有助于加深对生态过程模型参数特性的认识,为参数的合理取值及动态优化提供思路与依据,有助于进一步提高模型模拟和数据同化的精度与效率.%Ecological process model provides an effective way for studying water,carbon and nitrogen cycles of terrestrial ecosystem.The combination of the model and data assimilation could build a link between observation and simulation,which improves the effectiveness of model and observation methods to reveal the real state of land surface,but the accuracy of simulation and assimilation is directly affected by model parameters.Parameters are constants in traditional opinion;however,some current studies have focused on the time-space heterogeneity of parameters.In this paper,we used Harvard Forest Environmental Monitoring Site (EMS) data to simulate

Effects of a Program to Promote High Quality Parenting by Divorced and Separated Fathers.

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Sandler, Irwin; Gunn, Heather; Mazza, Gina; Tein, Jenn-Yun; Wolchik, Sharlene; Berkel, Cady; Jones, Sarah; Porter, Michele

2018-05-01

This paper reports on the effects on parenting and on children's mental health problems and competencies from a randomized trial of a parenting program for divorced and separated fathers. The program, New Beginnings Program-Dads (NBP-Dads), includes ten group sessions (plus two phone sessions) which promote parenting skills to increase positive interactions with children, improve father-child communication, use of effective discipline strategies, and skills to protect children from exposure to interparental conflict. The program was adapted from the New Beginnings Program, which has been tested in two randomized trials with divorced mothers and shown to strengthen mothers' parenting and improve long-term outcomes for children (Wolchik et al. 2007). Fathers were randomly assigned to receive either NBP-Dads or a 2-session active comparison program. The sample consisted of 384 fathers (201 NBP-Dads, 183 comparisons) and their children. Assessments using father, youth, and teacher reports were conducted at pretest, posttest, and 10-month follow-up. Results indicated positive effects of NBP-Dads to strengthen parenting as reported by fathers and youth at posttest and 10-month follow-up. Program effects to reduce child internalizing problems and increase social competence were found at 10 months. Many of the program effects were moderated by baseline level of the variable, child age, gender, and father ethnicity. This is the first randomized trial to find significant effects to strengthen father parenting following divorce. In view of recent changes in family courts to allot fathers increasing amounts of parenting time following divorce, the results have significant implications for improving outcomes for children from divorced families.

The anti-inflammatory effect of montelukast, a cysteinyl leukotriene receptor-1 antagonist, against estradiol-induced nonbacterial inflammation in the rat prostate.

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Said, Mahmoud M; Bosland, Maarten C

2017-02-01

There is no standard treatment of chronic nonbacterial prostatitis in humans. The current study was aimed to investigate the effect of montelukast, an antagonist of cysteinyl leukotriene receptor-1, against estrogen-induced, nonbacterial lateral lobe-specific prostate inflammation in rats. Male Wistar rats were randomized into five groups of six rats, including sham controls (group 1) and castrated rats (group 2), whereas nonbacterial prostatitis (NBP) was induced in groups 3-5 by castration followed by a daily subcutaneous injection of estradiol (0.25 mg/kg body weight) for 30 days. The rats were left otherwise untreated (group 3) or received a daily oral administration of montelukast (1 and 10 mg/kg body weight for groups 4 and 5, respectively) from the 17th day after castration for two consecutive weeks. Compared with sham controls, induction of NBP led to a significant increase in serum leukotriene B 4 (LTB4), tumor necrosis factor alpha (TNF-α), and interleukin 6 (IL-6) levels, along with a significant upregulation in the transcript level of proinflammatory molecules (nuclear factor kappa beta [NF-κβ] and inducible nitric oxide synthase [iNOS]), chemokines (monocyte chemoattractant protein-1 [MCP-1] and eotaxin), and E-selectin in the lateral prostate. Histological examination revealed intense inflammation in the prostate with leukocyte infiltration and acinar degeneration following estradiol treatment of castrated rats. Montelukast significantly suppressed the increase in serum and prostate proinflammatory mediators/chemokines expression and abolished the histologically inflammatory changes in the lateral prostate. These findings indicate that montelukast inhibits estradiol-induced NBP in a rat model through anti-inflammatory mechanisms, suggesting its future beneficial effect for the treatment of clinical chronic NBP.

Using a Fluorescent Cytosine Analogue tC[superscript o] To Probe the Effect of the Y567 to Ala Substitution on the Preinsertion Steps of dNMP Incorporation by RB69 DNA Polymerase

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Xia, Shuangluo; Beckman, Jeff; Wang, Jimin; Konigsberg, William H. (Yale)

2012-10-10

Residues in the nascent base pair binding pocket (NBP) of bacteriophage RB69 DNA polymerase (RB69pol) are responsible for base discrimination. Replacing Tyr567 with Ala leads to greater flexibility in the NBP, increasing the probability of misincorporation. We used the fluorescent cytosine analogue, 1,3-diaza-2-oxophenoxazine (tC{sup o}), to identify preinsertion step(s) altered by NBP flexibility. When tC{sup o} is the templating base in a wild-type (wt) RB69pol ternary complex, its fluorescence is quenched only in the presence of dGTP. However, with the RB69pol Y567A mutant, the fluorescence of tC{sup o} is also quenched in the presence of dATP. We determined the crystal structure of the dATP/tC{sup o}-containing ternary complex of the RB69pol Y567A mutant at 1.9 {angstrom} resolution and found that the incoming dATP formed two hydrogen bonds with an imino-tautomerized form of tC{sup o}. Stabilization of the dATP/tC{sup o} base pair involved movement of the tC{sup o} backbone sugar into the DNA minor groove and required tilting of the tC{sup o} tricyclic ring to prevent a steric clash with L561. This structure, together with the pre-steady-state kinetic parameters and dNTP binding affinity, estimated from equilibrium fluorescence titrations, suggested that the flexibility of the NBP, provided by the Y567 to Ala substitution, led to a more favorable forward isomerization step resulting in an increase in dNTP binding affinity.

La carbonización de residuos biomásicos: una exploración con perspectivas emocionantes The carbonization of biomass waste: an exploration with exciting prospects

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Jaime Quesada Kimzey

2012-11-01

Full Text Available Se da una idea general sobre el tema de la carbonización de residuos biomásicos, y se describen brevemente dos proyectos en esta área de investigación que en el primer semestre del 2012 se desarrollan en el Tecnológico de Costa Rica (TEC.Ambos proyectos están enfocados en la carbonización de residuos biomásicos del beneficiado del café y se realizan en colaboración con Coopetarrazú. El que dio inicio en el 2011 está dedicado a la carbonización de material seco, y abordará tanto el uso energético como el uso agrícola del biocarbón. El que dio inicio en el 2012 está enfocado en la carbonización hidrotérmica de biomasa presente en las aguamieles.This paper offers a general view of the subject of carbonization of waste biomass. Just as well, it briefly describes two related projects currently under execution at the TEC. Both projects are focused on carbonization of waste biomass from the industrial processing of coffee, in a joint effort with Coopetarrazú.The project initiated in 2011 is dedicated to carbonization of dried wastes and will explore energetic as well as agricultural use of the charcoal. The one initiating in 2012 focuses on the hydrothermal carbonization of biomass in waste slurries.

Mechanism of Oxidation of (p-Substituted Phenylthioacetic Acids with N-Bromophthalimide

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N. M. I. Alhaji

2011-01-01

Full Text Available The kinetics of oxidation of (phenylthioacetic acid (PTAA by N-Bromophthalimide (NBP in acetonitrile-water solvent mixture at 298 K in the presence of perchloric acid has been followed potentiometrically. The reaction is first-order each in NBP and PTAA and inverse fractional-order in H+. Also, it has been found that the reaction rate is not affected by changes in ionic strength of the reaction medium or by the addition of chemicals such as phthalimide, acrylonitrile and potassium bromide. However, an increase in the water content of the solvent mixture causes an increase in the rate of reaction. These observations have been well analyzed in favour of a SN2-type mechanism, involving NBP itself as the reactive species. Effect of substituents on the reaction rate has been analysed by employing various (p-sustituted phenylthioacetic acids. The electron-releasing substituent in the phenyl ring of PTAA accelerates the reaction rate while the electron-withdrawing substituent retards the rate. The excellently linear Hammett plot yields a large negative ρ value, supporting the involvement a bromosulphonium ion intermediate in the rate-determining step.

Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database.

Science.gov (United States)

Bissett, Andrew; Fitzgerald, Anna; Meintjes, Thys; Mele, Pauline M; Reith, Frank; Dennis, Paul G; Breed, Martin F; Brown, Belinda; Brown, Mark V; Brugger, Joel; Byrne, Margaret; Caddy-Retalic, Stefan; Carmody, Bernie; Coates, David J; Correa, Carolina; Ferrari, Belinda C; Gupta, Vadakattu V S R; Hamonts, Kelly; Haslem, Asha; Hugenholtz, Philip; Karan, Mirko; Koval, Jason; Lowe, Andrew J; Macdonald, Stuart; McGrath, Leanne; Martin, David; Morgan, Matt; North, Kristin I; Paungfoo-Lonhienne, Chanyarat; Pendall, Elise; Phillips, Lori; Pirzl, Rebecca; Powell, Jeff R; Ragan, Mark A; Schmidt, Susanne; Seymour, Nicole; Snape, Ian; Stephen, John R; Stevens, Matthew; Tinning, Matt; Williams, Kristen; Yeoh, Yun Kit; Zammit, Carla M; Young, Andrew

2016-01-01

Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The 'Biomes of Australian Soil Environments' (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function. BASE currently provides amplicon sequences and associated contextual data for over 900 sites encompassing all Australian states and territories, a wide variety of bioregions, vegetation and land-use types. Amplicons target bacteria, archaea and general and fungal-specific eukaryotes. The growing database will soon include metagenomics data. Data are provided in both raw sequence (FASTQ) and analysed OTU table formats and are accessed via the project's data portal, which provides a user-friendly search tool to quickly identify samples of interest. Processed data can be visually interrogated and intersected with other Australian diversity and environmental data using tools developed by the 'Atlas of Living Australia'. Developed within an open data framework, the BASE project is the first Australian soil microbial diversity database. The database will grow and link to other global efforts to explore microbial, plant, animal, and marine biodiversity. Its design and open access nature ensures that BASE will evolve as a valuable tool for documenting an often overlooked component of biodiversity and the many microbe-driven processes that are essential to sustain soil function and ecosystem services.

Remotely Sensed Northern Vegetation Response to Changing Climate: Growing Season and Productivity Perspective

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Ganguly, S.; Park, Taejin; Choi, Sungho; Bi, Jian; Knyazikhin, Yuri; Myneni, Ranga

2016-01-01

Vegetation growing season and maximum photosynthetic state determine spatiotemporal variability of seasonal total gross primary productivity of vegetation. Recent warming induced impacts accelerate shifts on growing season and physiological status over Northern vegetated land. Thus, understanding and quantifying these changes are very important. Here, we first investigate how vegetation growing season and maximum photosynthesis state are evolved and how such components contribute on inter-annual variation of seasonal total gross primary productivity. Furthermore, seasonally different response of northern vegetation to changing temperature and water availability is also investigated. We utilized both long-term remotely sensed data to extract larger scale growing season metrics (growing season start, end and duration) and productivity (i.e., growing season summed vegetation index, GSSVI) for answering these questions. We find that regionally diverged growing season shift and maximum photosynthetic state contribute differently characterized productivity inter-annual variability and trend. Also seasonally different response of vegetation gives different view of spatially varying interaction between vegetation and climate. These results highlight spatially and temporally varying vegetation dynamics and are reflective of biome-specific responses of northern vegetation to changing climate.

When alcohol is the answer: Trapping, identifying and quantifying simple alkylating species in aqueous environments.

Science.gov (United States)

Penketh, Philip G; Shyam, Krishnamurthy; Baumann, Raymond P; Zhu, Rui; Ishiguro, Kimiko; Sartorelli, Alan C; Ratner, Elena S

2016-09-01

Alkylating agents are a significant class of environmental carcinogens as well as commonly used anticancer therapeutics. Traditional alkylating activity assays have utilized the colorimetric reagent 4-(4-nitrobenzyl)pyridine (4NBP). However, 4NBP based assays have a relatively low sensitivity towards harder, more oxophilic alkylating species and are not well suited for the identification of the trapped alkyl moiety due to adduct instability. Herein we describe a method using water as the trapping agent which permits the trapping of simple alkylating electrophiles with a comparatively wide range of softness/hardness and permits the identification of donated simple alkyl moieties. Copyright © 2016 Elsevier Inc. All rights reserved.

Science framework for conservation and restoration of the sagebrush biome: Linking the Department of the Interior’s Integrated Rangeland Fire Management Strategy to long-term strategic conservation actions, Part 1. Science basis and applications

Science.gov (United States)

Chambers, Jeanne C.; Beck, Jeffrey L.; Bradford, John B.; Bybee, Jared; Campbell, Steve; Carlson, John; Christiansen, Thomas J; Clause, Karen J.; Collins, Gail; Crist, Michele R.; Dinkins, Jonathan B.; Doherty, Kevin E.; Edwards, Fred; Espinosa, Shawn; Griffin, Kathleen A.; Griffin, Paul; Haas, Jessica R.; Hanser, Steven E.; Havlina, Douglas W.; Henke, Kenneth F.; Hennig, Jacob D.; Joyce, Linda A; Kilkenny, Francis F.; Kulpa, Sarah M; Kurth, Laurie L; Maestas, Jeremy D; Manning, Mary E.; Mayer, Kenneth E.; Mealor, Brian A.; McCarthy, Clinton; Pellant, Mike; Perea, Marco A.; Prentice, Karen L.; Pyke, David A.; Wiechman , Lief A.; Wuenschel, Amarina

2017-01-01

The Science Framework is intended to link the Department of the Interior’s Integrated Rangeland Fire Management Strategy with long-term strategic conservation actions in the sagebrush biome. The Science Framework provides a multiscale approach for prioritizing areas for management and determining effective management strategies within the sagebrush biome. The emphasis is on sagebrush (Artemisia spp.) ecosystems and Greater sage-grouse (Centrocercus urophasianus). The approach provided in the Science Framework links sagebrush ecosystem resilience to disturbance and resistance to nonnative, invasive plant species to species habitat information based on the distribution and abundance of focal species. A geospatial process is presented that overlays information on ecosystem resilience and resistance, species habitats, and predominant threats and that can be used at the mid-scale to prioritize areas for management. A resilience and resistance habitat matrix is provided that can help decisionmakers evaluate risks and determine appropriate management strategies. Prioritized areas and management strategies can be refined by managers and stakeholders at the local scale based on higher resolution data and local knowledge. Decision tools are discussed for determining appropriate management actions for areas that are prioritized for management. Geospatial data, maps, and models are provided through the U.S. Geological Survey (USGS) ScienceBase and Bureau of Land Management (BLM) Landscape Approach Data Portal. The Science Framework is intended to be adaptive and will be updated as additional data become available on other values and species at risk. It is anticipated that the Science Framework will be widely used to: (1) inform emerging strategies to conserve sagebrush ecosystems, sagebrush dependent species, and human uses of the sagebrush system, and (2) assist managers in prioritizing and planning on-the-ground restoration and mitigation actions across the sagebrush biome.

Characterizing Urban Heat Islands of Global Settlements Using MODIS and Nighttime Lights Products

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Zhang, Ping; Imhoff, Marc L.; Wolfe, Robert E.; Bounoua, Lahouari

2010-01-01

Impervious surface area (ISA) from the National Geophysical Data Center (NGDC) and land surface temperature (LST) from the Moderate Resolution Imaging Spectroradiometer (MODIS) averaged over three annual cycles (2003-2005) are used in a spatial analysis to assess the urban heat island (UHI) signature on LST amplitude and its relationship with development intensity, size, and ecological setting for more than 3000 urban settlements globally. Development intensity zones based on fractional ISA are defined for each urban area emanating outward from the urban core to the nearby nonurban rural areas and used to stratify sampling for LST. Sampling is further constrained by biome type and elevation data to ensure objective intercomparisons between zones and between cities in different biomes. We find that the ecological context and settlement size significantly influence the amplitude of summer daytime UHI. Globally, an average of 3.8 C UHI is found in cities built in biomes dominated by forests; 1.9 C UHI in cities embedded in grass shrubs biomes; and only a weak UHI or sometimes an urban heat sink (UHS) in cities in arid and semi-arid biomes. Overall, the amplitude of the UHI is negatively correlated (R = -0.66) with the difference in vegetation density between urban and rural zones represented by the MODIS normalized difference vegetation index (NDVI). Globally averaged, the daytime UHI amplitude for all settlements is 2.6 C in summer and 1.4 C in winter. Globally, the average summer daytime UHI is 4.7 C for settlements larger than 500 square kilometers compared with 2.5 C for settlements smaller than 50 square kilometers and larger than 10 square kilometers. The stratification of cities by size indicates that the aggregated amount of ISA is the primary driver of UHI amplitude, with variations between ecological contexts and latitudinal zones. More than 60% of the total LST variance is explained by ISA for urban settlements within forests at mid to high latitudes. This

Enhancement of understory productivity by asynchronous phenology with overstory competitors in a temperate deciduous forest.

Science.gov (United States)

Jolly, William M; Nemani, Ramakrishna; Running, Steven W

2004-09-01

Some saplings and shrubs growing in the understory of temperate deciduous forests extend their periods of leaf display beyond that of the overstory, resulting in periods when understory radiation, and hence productivity, are not limited by the overstory canopy. To assess the importance of the duration of leaf display on the productivity of understory and overstory trees of deciduous forests in the north eastern United States, we applied the simulation model, BIOME-BGC with climate data for Hubbard Brook Experimental Forest, New Hampshire, USA and mean ecophysiological data for species of deciduous, temperate forests. Extension of the overstory leaf display period increased overstory leaf area index (LAI) by only 3 to 4% and productivity by only 2 to 4%. In contrast, extending the growing season of the understory relative to the overstory by one week in both spring and fall, increased understory LAI by 35% and productivity by 32%. A 2-week extension of the growing period in both spring and fall increased understory LAI by 53% and productivity by 55%.

Quantification of In-flight Physical Changes: Anthropometry and Neutral Body Posture

Science.gov (United States)

Young, K. S.; Reid, C. R.; Rajulu, S.

2014-01-01

Currently, NASA does not have sufficient in-flight anthropometric data gathered to assess the impact of physical body shape and size changes on suit sizing. For developing future planetary and reduced gravity suits, NASA needs to quantify the impacts of microgravity on anthropometry, body posture, and neutral body postures (NBP) to ensure optimal crew performance, fit, and comfort. To obtain these impacts, anthropometric data, circumference, length, height, breadth, and depth for body segments (i.e. chest, waist, bicep, thigh, calf) from astronauts for pre, in-, and postflight conditions needs to be collected. Once this data has been collected, a comparison between pre, in-, and postflight anthropometric values will be analyzed, yielding microgravity factors. The NBP will be used to determined body posture (joint angle) changes between subjects throughout the duration of a mission. Data collection, starting with Increments 37/38, is still in progress with the completion of 3 out of 12 subjects. NASA suit engineers and NASA's Extravehicular Activity (EVA) Project Office have identified that suit fit in microgravity could become an issue. It has been noted that crewmembers often need to adjust their suit sizing once they are in orbit. This adjustment could be due to microgravity effects on anthropometry and postural changes, and is necessary to ensure optimal crew performance, fit, and comfort in space. To date, the only data collected to determine the effects of microgravity on physical human changes have been during Skylab, STS-57, and a recent HRP study on seated height changes due to spinal elongation (Spinal Elongation, Master Task List [MTL] #221). The Skylab and the STS-57 studies found that there is a distinct neutral body posture (NBP) based on photographs. The still photographs showed that there is a distinguishable posture with the arms raised and the shoulder abducted; and, in addition, the knees were flexed with noticeable hip flexion and the foot

Quantitative comparison of the in situ microbial communities in different biomes

Energy Technology Data Exchange (ETDEWEB)

White, D.C. [Tennessee Univ., Knoxville, TN (United States)]|[Oak Ridge National Lab., TN (United States); Ringelberg, D.B.; Palmer, R.J. [Tennessee Univ., Knoxville, TN (United States). Center for Environmental Biotechnology

1995-12-31

A system to define microbial communities in different biomes requires the application of non-traditional methodology. Classical microbiological methods have severe limitations for the analysis of environmental samples. Pure-culture isolation, biochemical testing, and/or enumeration by direct microscopic counting are not well suited for the estimation of total biomass or the assessment of community composition within environmental samples. Such methods provide little insight into the in situ phenotypic activity of the extant microbiota since these techniques are dependent on microbial growth and thus select against many environmental microorganisms which are non- culturable under a wide range of conditions. It has been repeatedly documented in the literature that viable counts or direct counts of bacteria attached to sediment grains are difficult to quantitative and may grossly underestimate the extent of the existing community. The traditional tests provide little indication of the in situ nutritional status or for evidence of toxicity within the microbial community. A more recent development (MIDI Microbial Identification System), measure free and ester-linked fatty acids from isolated microorganisms. Bacterial isolates are identified by comparing their fatty acid profiles to the MIKI database which contains over 8000 entries. The application of the MIKI system to the analysis of environmental samples however, has significant drawbacks. The MIDI system was developed to identify clinical microorganisms and requires their isolation and culture on trypticase soy agar at 27{degrees}C. Since many isolates are unable to grow at these restrictive growth conditions, the system does not lend itself to identification of some environmental organisms. A more applicable methodology for environmental microbial analysis is based on the liquid extrication and separation of microbial lipids from environmental samples, followed by quantitative analysis using gas chromatography/

Autogestão da saúde e do corpo: a influência do paradigma biomédico

Directory of Open Access Journals (Sweden)

Sílvia Maria Agatti Lüdorf

2012-09-01

Full Text Available A presente resenha se refere à obra "Corpo em evidência: a ciência e a redefinição do humano", de autoria de Francisco Ortega e de Rafaela Zorzanelli. Por meio de uma linguagem acessível e instigante, calcados em uma reflexão crítica e atual, os autores abordam como o corpo vem sendo cada vez mais compreendido pela sociedade contemporânea à luz das explicações científicas provindas do referencial biomédico e tecnológico. As formas de se olhar e cientificizar o corpo, a autogestão da saúde e o determinismo biológico, em contexto marcado pela somatização e pela exteriorização, são as principais temáticas abordadas. Esse cenário teórico, desenvolvido com rigor e profundidade pelos autores, leva a questionar e refletir como tais aspectos atravessam a área da Educação Física.

基于Biome-BGC模型的天山北坡森林生态系统碳动态模拟%Simulation of Carbon Trend in Forest Ecosystem in Northern Slope of the Tianshan Mountains Based on Biome-BGC Model

Institute of Scientific and Technical Information of China (English)

韩其飞; 罗格平; 李超凡; 叶辉; 冯异星

2014-01-01

based on the generalized approach to simulate ecosystem development must be parameterized for the target ecosystems.Regarding the estimation of carbon dynamics,the use of process-based ecosystem models is of particular interest because this approach allows not only to estimate the carbon budget under various environmental conditions,but also to interpret and quantify the possible causes of carbon stock change along with the environmental change.The application of ecosystem models,however,encounters some specific difficulties in dryland environment,which is characterized by its climatic and human-induced features.After identifying the proper ecophysiological parameters used in Biome-BGC model,in this study the NPP (net primary productivity) and NEP (net ecological productivity) in the Tianshan Mountains were estimated.Furthermore,the responses of NPP/NEP to interannual climate change during the period of 1959-2009 and climate change scenarios in the future were modeled.Results showed that the average annual total NPP and NEP were 547.97 g · m-2 · a-1 and 61.24 g · m-2 · a-1 respectively,which revealed that the forests in the Tianshan Mountains perform as the carbon sinks.NPP and NEP were sensitive to the change of precipitation and the increase of air temperature.Under a scenario of 4 ℃ temperature increase,NPP was slightly improved,but NEP was decreased as soil respiration was boosted up.Drought stress was not significant in the study area as derived from the results.

Soil-borne bacterial structure and diversity does not reflect community activity in Pampa biome.

Science.gov (United States)

Lupatini, Manoeli; Suleiman, Afnan Khalil Ahmad; Jacques, Rodrigo Josemar Seminoti; Antoniolli, Zaida Inês; Kuramae, Eiko Eurya; de Oliveira Camargo, Flávio Anastácio; Roesch, Luiz Fernando Würdig

2013-01-01

The Pampa biome is considered one of the main hotspots of the world's biodiversity and it is estimated that half of its original vegetation was removed and converted to agricultural land and tree plantations. Although an increasing amount of knowledge is being assembled regarding the response of soil bacterial communities to land use change, to the associated plant community and to soil properties, our understanding about how these interactions affect the microbial community from the Brazilian Pampa is still poor and incomplete. In this study, we hypothesized that the same soil type from the same geographic region but under distinct land use present dissimilar soil bacterial communities. To test this hypothesis, we assessed the soil bacterial communities from four land-uses within the same soil type by 454-pyrosequencing of 16S rRNA gene and by soil microbial activity analyzes. We found that the same soil type under different land uses harbor similar (but not equal) bacterial communities and the differences were controlled by many microbial taxa. No differences regarding diversity and richness between natural areas and areas under anthropogenic disturbance were detected. However, the measures of microbial activity did not converge with the 16S rRNA data supporting the idea that the coupling between functioning and composition of bacterial communities is not necessarily correlated.

Soil respiration at mean annual temperature predicts annual total across vegetation types and biomes

Directory of Open Access Journals (Sweden)

M. Bahn

2010-07-01

Full Text Available Soil respiration (SR constitutes the largest flux of CO₂ from terrestrial ecosystems to the atmosphere. However, there still exist considerable uncertainties as to its actual magnitude, as well as its spatial and interannual variability. Based on a reanalysis and synthesis of 80 site-years for 57 forests, plantations, savannas, shrublands and grasslands from boreal to tropical climates we present evidence that total annual SR is closely related to SR at mean annual soil temperature (SR_MAT, irrespective of the type of ecosystem and biome. This is theoretically expected for non water-limited ecosystems within most of the globally occurring range of annual temperature variability and sensitivity (Q₁₀. We further show that for seasonally dry sites where annual precipitation (P is lower than potential evapotranspiration (PET, annual SR can be predicted from wet season SR_MAT corrected for a factor related to P/PET. Our finding indicates that it can be sufficient to measure SR_MAT for obtaining a well constrained estimate of its annual total. This should substantially increase our capacity for assessing the spatial distribution of soil CO₂ emissions across ecosystems, landscapes and regions, and thereby contribute to improving the spatial resolution of a major component of the global carbon cycle.

¿Cómo cambiar hacia sociedades sostenibles? Reflexiones sobre biomímesis y autolimitación

Directory of Open Access Journals (Sweden)

Riechmann, Jorge

2005-06-01

Full Text Available We live in socio-economical systems which are too large in relation to the biosphere which contains them, on the one hand, and on the other, we live in badly adapted systems, that is, human systems not well fitted into the natural ecosystems. The scale problem calls for a move toward self-limitation by human societies, which (in terms of political economy could be thought of as global demand management; the structural problem demands a reconstruction of the technosphere according to biomimicry principIes.

Vivimos dentro de sistemas socioeconámicos humanos demasiado grandes en relación con la biosfera que los contiene, por una parte; y sistemas mal adaptados, sistemas humanos que encajan mal en los ecosistemas naturales. El problema de escala reclama un movimiento de autolimitación por parte de las sociedades humanas, que podríamos concebir (en términos de economía política bajo la idea de gestión global de la demanda; el problema de estructura exige una reconstrucción de la tecnosfera de acuerdo con principios de biomímesis.

Local climatic conditions constrain soil yeast diversity patterns in Mediterranean forests, woodlands and scrub biome.

Science.gov (United States)

Yurkov, Andrey M; Röhl, Oliver; Pontes, Ana; Carvalho, Cláudia; Maldonado, Cristina; Sampaio, José Paulo

2016-02-01

Soil yeasts represent a poorly known fraction of the soil microbiome due to limited ecological surveys. Here, we provide the first comprehensive inventory of cultivable soil yeasts in a Mediterranean ecosystem, which is the leading biodiversity hotspot for vascular plants and vertebrates in Europe. We isolated and identified soil yeasts from forested sites of Serra da Arrábida Natural Park (Portugal), representing the Mediterranean forests, woodlands and scrub biome. Both cultivation experiments and the subsequent species richness estimations suggest the highest species richness values reported to date, resulting in a total of 57 and 80 yeast taxa, respectively. These values far exceed those reported for other forest soils in Europe. Furthermore, we assessed the response of yeast diversity to microclimatic environmental factors in biotopes composed of the same plant species but showing a gradual change from humid broadleaf forests to dry maquis. We observed that forest properties constrained by precipitation level had strong impact on yeast diversity and on community structure and lower precipitation resulted in an increased number of rare species and decreased evenness values. In conclusion, the structure of soil yeast communities mirrors the environmental factors that affect aboveground phytocenoses, aboveground biomass and plant projective cover. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Dinámicas TIC en educación biomédica y odontológica

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Gleyvis Coro Montanet

2015-12-01

Full Text Available Ensayo que aborda un espectro de propuestas de nuevas tecnológicas aplicables en el ámbito de la enseñanza biomédica de mayor implicación operatoria, con especificidad en la rama odontológica. Después de un breve repaso de los elementos que han dificultado la inserción de las TIC en las academias médicas, el trabajo ofrece variedad de estrategias para gestionar el cambio y la mejora a través de la aplicación de tecnologías, con apoyo en evidencias de éxito y dependientes de la estrecha relación de lo tecnológico con un modelo educativo -de simulación preclínica y ejercitación teórico/práctica- dinámico y flexible. Todo refrendado por un proyecto de innovación, con base en la investigación-acción, llevado a cabo en la titulación de Odontología de la Universidad Europea de Madrid, que concluye con el aporte de buenas prácticas y una prospectiva de considerable desarrollo a corto y largo plazo. DOI: 10.18870/hlrc.v5i4.290

Global net primary production and heterotrophic respiration for 1987

Energy Technology Data Exchange (ETDEWEB)

Hunt, R.E. Jr.; Piper, S.C.; Nemani, R. [Univ. of Montana, Missoula, MT (United States)]|[Scripps Institute of Oceanography, La Jolla, CA (United States)] [and others

1995-06-01

An ecosystem process model, BIOME-BGC, was parameterized and used to simulate the actual net primary production and heterotrophic respiration using daily climatic data, land cover type, leaf area index gridded to 1{degree} latitude by 1{degree} longitude grid cells for the year 1987. Global net primary production was 52 Pg C. These estimates were validated directly by two different methods. First, the grid cells were aggregated and used as inputs to a 3D atmospheric transport model, to compare CO{sub 2} station data with predictions. We simulated the intra-annual variation of atmospheric CO{sub 2} well for the northern hemisphere, but not for the southern hemisphere. Second, we calculated the net {sup 13}C uptake of vegetation, which is a function of water use efficiency. The {sup 13}C/{sup 12}C ratios agreed with measured data, indicating a strong limitation of global primary processes by the hydrologic cycle, especially precipitation. These are different from other global carbon models as we can simulate the year-to-year variation of climate, including El Nino, on the global carbon cycle.

Drivers of leaf carbon exchange capacity across biomes at the continental scale.

Science.gov (United States)

Smith, Nicholas G; Dukes, Jeffrey S

2018-04-29

Realistic representations of plant carbon exchange processes are necessary to reliably simulate biosphere-atmosphere feedbacks. These processes are known to vary over time and space, though the drivers of the underlying rates are still widely debated in the literature. Here, we measured leaf carbon exchange in >500 individuals of 98 species from the neotropics to high boreal biomes to determine the drivers of photosynthetic and dark respiration capacity. Covariate abiotic (long- and short-term climate) and biotic (plant type, plant size, ontogeny, water status) data were used to explore significant drivers of temperature-standardized leaf carbon exchange rates. Using model selection, we found the previous week's temperature and soil moisture at the time of measurement to be a better predictor of photosynthetic capacity than long-term climate, with the combination of high recent temperatures and low soil moisture tending to decrease photosynthetic capacity. Non-trees (annual and perennials) tended to have greater photosynthetic capacity than trees, and, within trees, adults tended to have greater photosynthetic capacity than juveniles, possibly as a result of differences in light availability. Dark respiration capacity was less responsive to the assessed drivers than photosynthetic capacity, with rates best predicted by multi-year average site temperature alone. Our results suggest that, across large spatial scales, photosynthetic capacity quickly adjusts to changing environmental conditions, namely light, temperature, and soil moisture. Respiratory capacity is more conservative and most responsive to longer-term conditions. Our results provide a framework for incorporating these processes into large-scale models and a dataset to benchmark such models. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

“Não” para jovens bombados, “sim” para velhos empinados: o discurso sobre anabolizantes e saúde em artigos da área biomédica

OpenAIRE

Moraes, Danielle Ribeiro de; Castiel, Luis David; Ribeiro, Ana Paula Pereira da Gama Alves

2015-01-01

Abordamos o discurso médico sobre o uso dos esteroides anabolizantes androgênicos (EAA), drogas sintéticas cujo abuso vem sendo caracterizado como problema de saúde pública, sendo operado na contraposição entre usos “médicos” e “não-médicos”. Com base em abordagem qualitativa, realizamos análise de enunciações presentes em 76 artigos da área biomédica entre 2002 e 2012. Nesse discurso, permanece o banimento, entre jovens, de usos de EAA não regulados pela medicina, ao passo em que as fronteir...

Mosquito community composition in dynamic landscapes from the Atlantic Forest biome (Diptera, Culicidae

Directory of Open Access Journals (Sweden)

Mário Luís Pessôa Guedes

2014-03-01

Full Text Available Mosquito community composition in dynamic landscapes from the Atlantic Forest biome (Diptera, Culicidae. Considering that some species of Culicidae are vectors of pathogens, both the knowledge of the diversity of the mosquito fauna and how some environment factors influence in it, are important subjects. In order to address the composition of Culicidae species in a forest reserve in southern Atlantic Forest, we compared biotic and abiotic environmental determinants and how they were associated with the occurrence of species between sunset and sunrise. The level of conservation of the area was also considered. The investigation was carried out at Reserva Natural do Morro da Mina, in Antonina, state of Paraná, Brazil. We performed sixteen mosquito collections employing Shannon traps at three-hour intervals, from July 2008 to June 2009. The characterization of the area was determined using ecological indices of diversity, evenness, dominance and similarity. We compared the frequency of specimens with abiotic variables, i.e., temperature, relative humidity and pluviosity. Seven thousand four hundred ten mosquito females were captured. They belong to 48 species of 12 genera. The most abundant genera were Anopheles, Culex, Coquillettidia, Aedes and Runchomyia. Among the species, the most abundant was Anopheles cruzii, the primary vector of Plasmodium spp. in the Atlantic Forest. Results of the analyses showed that the abiotic variables we tested did not influence the occurrence of species, although certain values suggested that there was an optimum range for the occurrence of culicid species. It was possible to detect the presence of species of Culicidae with different epidemiologic profiles and habitat preference.

Influencia del rayado sobre la resistencia electroquímica de les aleaciones de NiTi tratadas por un nuevo tratamiento térmico para aplicaciones biomédicas

OpenAIRE

Soualah, Lakhdar

2005-01-01

Las aleaciones de níquel-titanio son aleaciones que se utilizan cada vez más en aplicaciones biomédicas, por sus propiedades interesantes de superelasticidad, de memoria de forma, de resistencia a la corrosión y de biocompatibilidad. Sin embargo, los resultados obtenidos de su resistencia a la corrosión son muy variables, dependiendo del estado de superficie. Así, para mejorar, la resistencia a la corrosión de este material, se diseñó en un trabajo anterior un nuevo tratamie...

Estudio de la Citotoxicidad de Cerámicas Biomórficas de SiC Recubiertas con Vidrio Bioactivo

Directory of Open Access Journals (Sweden)

Borrajo, J. P.

2006-04-01

Full Text Available In the past years there was a need to develop new tough bioactive materials capable to resist high loads when implanted in the body, that led to the production of bioactive coatings on metallic substrates. A new approach, which consists of biomorphic silicon carbide (SiC coated with bioactive glass by Pulsed Laser Deposition (PLD, was recently presented. This new material joins the high mechanical strength, lightness and porosity of biomorphic SiC and the bioactive properties of PLD glass films. In this work, a multiple evaluation of this new material is presented starting from the biomorphic SiC morphology and porosity, following with the bioactivity in simulated body fluid of the coatings, and ending with a deep in vitro study with MG-63 cells. The citotoxicity of the SiC coated and uncoated and the cell proliferation and attachment were studied.

La necesidad de desarrollar nuevos implantes basados en materiales bioactivos que sean capaces de soportar grandes cargas mecánicas ha llevado a la producción de sustratos metálicos recubiertos con cerámicas bioactivas. Recientemente se ha propuesto un dispositivo alternativo que consiste en un sustrato de carburo de silicio (SiC biomórfico recubierto con vidrio bioactivo, mediante la técnica de Depósito por Láser Pulsado (PLD, y que dispone de la resistencia mecánica adecuada, además de gran ligereza y una porosidad intrínseca muy favorable de cara a la implantación. En este trabajo se presenta un estudio interdisciplinar de este nuevo material centrado en la morfología y porosidad de sustratos de SiC provenientes de diferentes maderas, la bioactividad de los recubrimientos producidos por PLD y en la evaluación in vitro con células de osteosarcoma MG-63 con la que se ha determinado la citotoxicidad de estos materiales y se ha estudiado la influencia de los mismos en la adhesión y la proliferación celular.

Implementación y comparación de algoritmos basados en técnicas biométricas de voz para reconocimiento de locutor en colaboración con la empresa IECISA

OpenAIRE

Ugarte Echeverría, María Elísabe

2010-01-01

Este proyecto fin de carrera se enmarca en el área de procesado de señal, y tiene como objetivo obtener un sistema de reconocimiento de locutores. Esta técnica biométrica está fundamentada en las características de la voz de cada individuo. El modelado de las voces se realiza utilizando mezclas gaussianas y la caracterización está basada en escala Mel. Ingeniería de Telecomunicación Telekomunikazio Ingeniaritza

Shifts in functional traits elevate risk of fire-driven tree dieback in tropical savanna and forest biomes.

Science.gov (United States)

Pellegrini, Adam F A; Franco, Augusto C; Hoffmann, William A

2016-03-01

Numerous predictions indicate rising CO2 will accelerate the expansion of forests into savannas. Although encroaching forests can sequester carbon over the short term, increased fires and drought-fire interactions could offset carbon gains, which may be amplified by the shift toward forest plant communities more susceptible to fire-driven dieback. We quantify how bark thickness determines the ability of individual tree species to tolerate fire and subsequently determine the fire sensitivity of ecosystem carbon across 180 plots in savannas and forests throughout the 2.2-million km(2) Cerrado region in Brazil. We find that not accounting for variation in bark thickness across tree species underestimated carbon losses in forests by ~50%, totaling 0.22 PgC across the Cerrado region. The lower bark thicknesses of plant species in forests decreased fire tolerance to such an extent that a third of carbon gains during forest encroachment may be at risk of dieback if burned. These results illustrate that consideration of trait-based differences in fire tolerance is critical for determining the climate-carbon-fire feedback in tropical savanna and forest biomes. © 2015 John Wiley & Sons Ltd.

Termite assemblages in five semideciduous Atlantic Forest fragments in the northern coastland limit of the biome

Directory of Open Access Journals (Sweden)

Heitor Bruno de Araújo Souza

2012-03-01

Full Text Available Termites are abundant organisms in tropical ecosystems and strongly influence the litter decomposition and soil formation. Despite their importance, few studies about their assemblage structures have been made in Brazilian Atlantic Forest fragments, especially in the area located north of the São Francisco River. This study aims to analyze the assemblage composition of five Atlantic Forest fragments located in the northern biome limit along the Brazilian coast. A standardized sampling protocol of termites was applied in each fragment. Thirty-three termite species belonging to twenty genera and three families were found in the forest fragments. The wood-feeder group was dominant both concerning to species richness and number of encounters in all areas. In sites northern to 7°S, there is an evident simplification of the termite assemblage composition regarding species richness and number of encounters by feeding group. This fact is apparently due to a higher sandy level in soils and to semideciduous character of the vegetation in the northern fragments. Thus, even on the north of São Francisco River, termite biodiversity is heterogeneously spread with highest density of species in the portion between 07°S and São Francisco River mouth (10°29'S.

Beyond aridification: multiple explanations for the elevated diversification of cacti in the New World Succulent Biome.

Science.gov (United States)

Hernández-Hernández, Tania; Brown, Joseph W; Schlumpberger, Boris O; Eguiarte, Luis E; Magallón, Susana

2014-06-01

Succulent plants are widely distributed, reaching their highest diversity in arid and semi-arid regions. Their origin and diversification is thought to be associated with a global expansion of aridity. We test this hypothesis by investigating the tempo and pattern of Cactaceae diversification. Our results contribute to the understanding of the evolution of New World Succulent Biomes. We use the most taxonomically complete dataset currently available for Cactaceae. We estimate divergence times and utilize Bayesian and maximum likelihood methods that account for nonrandom taxonomic sampling, possible extinction scenarios and phylogenetic uncertainty to analyze diversification rates, and evolution of growth form and pollination syndrome. Cactaceae originated shortly after the Eocene-Oligocene global drop in CO2 , and radiation of its richest genera coincided with the expansion of aridity in North America during the late Miocene. A significant correlation between growth form and pollination syndrome was found, as well as a clear state dependence between diversification rate, and pollination and growth-form evolution. This study suggests a complex picture underlying the diversification of Cactaceae. It not only responded to the availability of new niches resulting from aridification, but also to the correlated evolution of novel growth forms and reproductive strategies. © 2014 The Authors. New Phytologist © 2014 New Phytologist Trust.

Simulation of Forest Carbon Fluxes Using Model Incorporation and Data Assimilation

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Min Yan

2016-07-01

Full Text Available This study improved simulation of forest carbon fluxes in the Changbai Mountains with a process-based model (Biome-BGC using incorporation and data assimilation. Firstly, the original remote sensing-based MODIS MOD_17 GPP (MOD_17 model was optimized using refined input data and biome-specific parameters. The key ecophysiological parameters of the Biome-BGC model were determined through the Extended Fourier Amplitude Sensitivity Test (EFAST sensitivity analysis. Then the optimized MOD_17 model was used to calibrate the Biome-BGC model by adjusting the sensitive ecophysiological parameters. Once the best match was found for the 10 selected forest plots for the 8-day GPP estimates from the optimized MOD_17 and from the Biome-BGC, the values of sensitive ecophysiological parameters were determined. The calibrated Biome-BGC model agreed better with the eddy covariance (EC measurements (R2 = 0.87, RMSE = 1.583 gC·m−2·d−1 than the original model did (R2 = 0.72, RMSE = 2.419 gC·m−2·d−1. To provide a best estimate of the true state of the model, the Ensemble Kalman Filter (EnKF was used to assimilate five years (of eight-day periods between 2003 and 2007 of Global LAnd Surface Satellite (GLASS LAI products into the calibrated Biome-BGC model. The results indicated that LAI simulated through the assimilated Biome-BGC agreed well with GLASS LAI. GPP performances obtained from the assimilated Biome-BGC were further improved and verified by EC measurements at the Changbai Mountains forest flux site (R2 = 0.92, RMSE = 1.261 gC·m−2·d−1.

Réalité augmentée pour la chirurgie minimalement invasive du foie utilisant un modèle biomécanique guidé par l'image

OpenAIRE

Haouchine , Nazim; Cotin , Stéphane; Dequidt , Jérémie; Kerrien , Erwan; Berger , Marie-Odile

2014-01-01

National audience; Cet article présente une méthode de réalité augmentée pour la chirurgie minimalement invasive du foie. Le réseau vasculaire et les tumeurs internes reconstruites à partir des données pré-opératoires (IRM ou CT) peuvent ainsi être visualisées dans l'image laparoscopique afin de guider les gestes du chirurgien pendant l'opération. Cette méthode est capable de propager les déformations 3D de la surface du foie à ses structures internes grâce à un modèle biomécanique sous-jacen...

Re-identificación de personas a través de sus características soft-biométricas en un entorno multi-cámara de video-vigilancia

OpenAIRE

Daniela Alejandra, Moctezuma-Ochoa

2016-01-01

Resumen: Los sistemas de video vigilancia inteligente se convirtieron en un importante tema de investigación en los últimos años debido a su importancia para el sector de la seguridad. En este artículo se presenta un sistema completo de video vigilancia inteligente. Este sistema comprende dos importantes módulos: detección de personas y re-identificación de personas mediante características soft-biométricas. Estas dos fases en conjunto proporcionan un sistema completo para la re-identificació...

Allowance Holdings and Transfers Data Inventory

Data.gov (United States)

U.S. Environmental Protection Agency — The Allowance Holdings and Transfers Data Inventory contains measured data on holdings and transactions of allowances under the NOx Budget Trading Program (NBP), a...

Biome-specific effects of nitrogen and phosphorus on the photosynthetic characteristics of trees at a forest-savanna boundary in Cameroon.

Science.gov (United States)

Domingues, Tomas Ferreira; Ishida, F Yoko; Feldpausch, Ted R; Grace, John; Meir, Patrick; Saiz, Gustavo; Sene, Olivier; Schrodt, Franziska; Sonké, Bonaventure; Taedoumg, Herman; Veenendaal, Elmar M; Lewis, Simon; Lloyd, Jon

2015-07-01

Photosynthesis/nutrient relationships of proximally growing forest and savanna trees were determined in an ecotonal region of Cameroon (Africa). Although area-based foliar N concentrations were typically lower for savanna trees, there was no difference in photosynthetic rates between the two vegetation formation types. Opposite to N, area-based P concentrations were-on average-slightly lower for forest trees; a dependency of photosynthetic characteristics on foliar P was only evident for savanna trees. Thus savanna trees use N more efficiently than their forest counterparts, but only in the presence of relatively high foliar P. Along with some other recent studies, these results suggest that both N and P are important modulators of woody tropical plant photosynthetic capacities, influencing photosynthetic metabolism in different ways that are also biome specific. Attempts to find simple unifying equations to describe woody tropical vegetation photosynthesis-nutrient relationships are likely to meet with failure, with ecophysiological distinctions between forest and savanna requiring acknowledgement.

The influence of norepinephrine and phenylephrine on cerebral perfusion and oxygenation during propofol-remifentanil and propofol-remifentanil-dexmedetomidine anaesthesia in piglets

DEFF Research Database (Denmark)

Mikkelsen, Mai Louise Grandsgaard; Ambrus, Rikard; Rasmussen, Rune

2018-01-01

of dexmedetomidine. Cerebral perfusion measured by laser speckle contrast imaging was related to cerebral oxygenation as measured by an intracerebral Licox probe (partial pressure of oxygen) and transcranial near infrared spectroscopy technology (NIRS) (cerebral oxygen saturation). Results During propofol......–remifentanil anaesthesia, increases in blood pressure by norepinephrine and phenylephrine did not change cerebral perfusion significantly, but cerebral partial pressure of oxygen (Licox) increased following vasopressors in both groups and increases following norepinephrine were significant (NBP: P = 0.04, LBP: P = 0......–remifentanil–dexmedetomidine anaesthesia was not followed by significant changes in cerebral perfusion. Licox measures increased significantly following both vasopressors in both groups, whereas the decreases in NIRS measures were only significant in the NBP group. Conclusions Cerebral partial pressure of oxygen measured by Licox...

Numerical simulation of narrow bipolar electromagnetic pulses generated by thunderstorm discharges

Science.gov (United States)

Bochkov, E. I.; Babich, L. P.; Kutsyk, I. M.

2013-07-01

Using the concept of avalanche relativistic runaway electrons (REs), we perform numerical simulations of compact intracloud discharge (CID) as a generator of powerful natural electromagnetic pulses (EMPs) in the HF-VHF range, called narrow bipolar pulses (NBPs). For several values of the field overvoltage and altitude at which the discharge develops, the numbers of seed electrons initiating the avalanche are evaluated, with which the calculated EMP characteristics are consistent with the measured NBP parameters. We note shortcomings in the hypothesis assuming participation of cosmic ray air showers in avalanche initiation. The discharge capable of generating NBPs produces REs in numbers close to those in the source of terrestrial γ-ray flashes (TGFs), which can be an argument in favor of a unified NBP and TGF source.