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Sample records for biologically inspired visual

  1. Biologically Inspired Model for Visual Cognition Achieving Unsupervised Episodic and Semantic Feature Learning.

    Science.gov (United States)

    Qiao, Hong; Li, Yinlin; Li, Fengfu; Xi, Xuanyang; Wu, Wei

    2016-10-01

    Recently, many biologically inspired visual computational models have been proposed. The design of these models follows the related biological mechanisms and structures, and these models provide new solutions for visual recognition tasks. In this paper, based on the recent biological evidence, we propose a framework to mimic the active and dynamic learning and recognition process of the primate visual cortex. From principle point of view, the main contributions are that the framework can achieve unsupervised learning of episodic features (including key components and their spatial relations) and semantic features (semantic descriptions of the key components), which support higher level cognition of an object. From performance point of view, the advantages of the framework are as follows: 1) learning episodic features without supervision-for a class of objects without a prior knowledge, the key components, their spatial relations and cover regions can be learned automatically through a deep neural network (DNN); 2) learning semantic features based on episodic features-within the cover regions of the key components, the semantic geometrical values of these components can be computed based on contour detection; 3) forming the general knowledge of a class of objects-the general knowledge of a class of objects can be formed, mainly including the key components, their spatial relations and average semantic values, which is a concise description of the class; and 4) achieving higher level cognition and dynamic updating-for a test image, the model can achieve classification and subclass semantic descriptions. And the test samples with high confidence are selected to dynamically update the whole model. Experiments are conducted on face images, and a good performance is achieved in each layer of the DNN and the semantic description learning process. Furthermore, the model can be generalized to recognition tasks of other objects with learning ability.

  2. Honeybees as a model for the study of visually guided flight, navigation, and biologically inspired robotics.

    Science.gov (United States)

    Srinivasan, Mandyam V

    2011-04-01

    Research over the past century has revealed the impressive capacities of the honeybee, Apis mellifera, in relation to visual perception, flight guidance, navigation, and learning and memory. These observations, coupled with the relative ease with which these creatures can be trained, and the relative simplicity of their nervous systems, have made honeybees an attractive model in which to pursue general principles of sensorimotor function in a variety of contexts, many of which pertain not just to honeybees, but several other animal species, including humans. This review begins by describing the principles of visual guidance that underlie perception of the world in three dimensions, obstacle avoidance, control of flight speed, and orchestrating smooth landings. We then consider how navigation over long distances is accomplished, with particular reference to how bees use information from the celestial compass to determine their flight bearing, and information from the movement of the environment in their eyes to gauge how far they have flown. Finally, we illustrate how some of the principles gleaned from these studies are now being used to design novel, biologically inspired algorithms for the guidance of unmanned aerial vehicles.

  3. Computational intelligence in multi-feature visual pattern recognition hand posture and face recognition using biologically inspired approaches

    CERN Document Server

    Pisharady, Pramod Kumar; Poh, Loh Ai

    2014-01-01

    This book presents a collection of computational intelligence algorithms that addresses issues in visual pattern recognition such as high computational complexity, abundance of pattern features, sensitivity to size and shape variations and poor performance against complex backgrounds. The book has 3 parts. Part 1 describes various research issues in the field with a survey of the related literature. Part 2 presents computational intelligence based algorithms for feature selection and classification. The algorithms are discriminative and fast. The main application area considered is hand posture recognition. The book also discusses utility of these algorithms in other visual as well as non-visual pattern recognition tasks including face recognition, general object recognition and cancer / tumor classification. Part 3 presents biologically inspired algorithms for feature extraction. The visual cortex model based features discussed have invariance with respect to appearance and size of the hand, and provide good...

  4. A Biologically Inspired Classifier

    CERN Document Server

    Bagnoli, Franco

    2007-01-01

    We present a method for measuring the distance among records based on the correlations of data stored in the corresponding database entries. The original method (F. Bagnoli, A. Berrones and F. Franci. Physica A 332 (2004) 509-518) was formulated in the context of opinion formation. The opinions expressed over a set of topic originate a ``knowledge network'' among individuals, where two individuals are nearer the more similar their expressed opinions are. Assuming that individuals' opinions are stored in a database, the authors show that it is possible to anticipate an opinion using the correlations in the database. This corresponds to approximating the overlap between the tastes of two individuals with the correlations of their expressed opinions. In this paper we extend this model to nonlinear matching functions, inspired by biological problems such as microarray (probe-sample pairing). We investigate numerically the error between the correlation and the overlap matrix for eight sequences of reference with r...

  5. Biologically Inspired Visual Model With Preliminary Cognition and Active Attention Adjustment.

    Science.gov (United States)

    Qiao, Hong; Xi, Xuanyang; Li, Yinlin; Wu, Wei; Li, Fengfu

    2015-11-01

    Recently, many computational models have been proposed to simulate visual cognition process. For example, the hierarchical Max-Pooling (HMAX) model was proposed according to the hierarchical and bottom-up structure of V1 to V4 in the ventral pathway of primate visual cortex, which could achieve position- and scale-tolerant recognition. In our previous work, we have introduced memory and association into the HMAX model to simulate visual cognition process. In this paper, we improve our theoretical framework by mimicking a more elaborate structure and function of the primate visual cortex. We will mainly focus on the new formation of memory and association in visual processing under different circumstances as well as preliminary cognition and active adjustment in the inferior temporal cortex, which are absent in the HMAX model. The main contributions of this paper are: 1) in the memory and association part, we apply deep convolutional neural networks to extract various episodic features of the objects since people use different features for object recognition. Moreover, to achieve a fast and robust recognition in the retrieval and association process, different types of features are stored in separated clusters and the feature binding of the same object is stimulated in a loop discharge manner and 2) in the preliminary cognition and active adjustment part, we introduce preliminary cognition to classify different types of objects since distinct neural circuits in a human brain are used for identification of various types of objects. Furthermore, active cognition adjustment of occlusion and orientation is implemented to the model to mimic the top-down effect in human cognition process. Finally, our model is evaluated on two face databases CAS-PEAL-R1 and AR. The results demonstrate that our model exhibits its efficiency on visual recognition process with much lower memory storage requirement and a better performance compared with the traditional purely computational

  6. Biologically Inspired Strategies, Algorithms and Hardware for Visual Guidance of Autonomous Helicopters

    Science.gov (United States)

    2011-05-02

    accurate measurement of optic flow along this axis [3]. This way of mapping the world is similar in some respects to that achieved by the compound...eyestalks and the visual world of semi- terrestrial crabs”, J Comp Physiol A, vol. 159, pp. 801-811, 1986. [5] R. J. D. Moore, S. Thurrrowgood, D. Bland...3-8, 2010. [8] G. Stange, “The ocellar component of flight equilibrium control in dragonflies ,” Journal of Comparative Physiology, vol. 141, pp. 335

  7. A biologically inspired psychometric function for accuracy of visual identification as a function of exposure duration

    DEFF Research Database (Denmark)

    Petersen, Anders; Andersen, Tobias

    in modelling human performance in whole and partial report tasks in which multiple simultaneously presented letters are to be reported (Shibuya & Bundesen, 1988). Therefore, we investigated visual letter identification as a function of exposure duration. On each trial, a single randomly chosen letter (A......The psychometric function of letter identification is typically described as a function of stimulus intensity. However, the effect of stimulus exposure duration on letter identification remains poorly described. This is surprising because the effect of exposure duration has played a central role......-Z) was presented at the centre of the screen. Exposure duration was varied from 5 to 210 milliseconds. The letter was followed by a pattern mask. Three subjects each completed 54,080 trials in a 26-Alternative Forced Choice procedure. We compared the exponential, the gamma and the Weibull psychometric functions...

  8. From biologically-inspired physics to physics-inspired biology From biologically-inspired physics to physics-inspired biology

    Science.gov (United States)

    Kornyshev, Alexei A.

    2010-10-01

    conference were elegant, but most importantly closely related to experimental findings. On the first day of the meeting we were able to celebrate Adrian Parsegian's 70th birthday. A worldwide renowned figure in modern biological physics, its distinguished veteran, a former President of the Biophysical Society and an author of many seminal, pioneering papers, Adrian has worked at the NIH for four decades and over the last two has led a vibrant Structural and Physical Biology Laboratory, created by him. Adrian has done a lot for physicists and biologists coming closer together. That summer, full of his ever young energy—an example for many young scientists—he is moving to build a new research team as a Professor at the University of Massachusetts at Amherst. My feeling is that something is beginning to move in the difficult interactions between the physical and biological communities, the progress noticeable at least at the scale of 130 people present in Trieste. A few years ago, Paul Selvin, a biophysicist at the University of Illinois who has made crucial contributions to the visualization and characterization of biomolecular motility, suggested that if Rutherford was alive today, he would have possibly conclude that 'All science is either....biology or tool-making for biology... or not fundable'. Generally, 'pride and prejudice' today is no longer on the side of physicists. But in order to overcome the barrier of skepticism we, physicists, not only should not be shy about what we were able to demonstrate in the test tube, but also have to think how we could show that our 'beautiful physical effects' work equally inside the cell! This is much more difficult. Many of us will not be able to do it alone without finding a biologist match. Crick was not only a great mind, he was also lucky to meet his biologist. But Crick himself was very serious about real biology rather than just 'biologically-inspired physics'. And this is what Adrian advised all of us to do in his 1997

  9. Sensory architectures for biologically inspired autonomous robotics.

    Science.gov (United States)

    Higgins, C M

    2001-04-01

    Engineers have a lot to gain from studying biology. The study of biological neural systems alone provides numerous examples of computational systems that are far more complex than any man-made system and perform real-time sensory and motor tasks in a manner that humbles the most advanced artificial systems. Despite the evolutionary genesis of these systems and the vast apparent differences between species, there are common design strategies employed by biological systems that span taxa, and engineers would do well to emulate these strategies. However, biologically-inspired computational architectures, which are continuous-time and parallel in nature, do not map well onto conventional processors, which are discrete-time and serial in operation. Rather, an implementation technology that is capable of directly realizing the layered parallel structure and nonlinear elements employed by neurobiology is required for power- and space-efficient implementation. Custom neuromorphic hardware meets these criteria and yields low-power dedicated sensory systems that are small, light, and ideal for autonomous robot applications. As examples of how this technology is applied, this article describes both a low-level neuromorphic hardware emulation of an elementary visual motion detector, and a large-scale, system-level spatial motion integration system.

  10. The VIPER project (Visualization Integration Platform for Exploration Research): a biologically inspired autonomous reconfigurable robotic platform for diverse unstructured environments

    Science.gov (United States)

    Schubert, Oliver J.; Tolle, Charles R.

    2004-09-01

    highly unstructured environment, but also gains robotic manipulation abilities, normally relegated as secondary add-ons within existing vehicles, all within one small condensed package. The prototype design presented includes a Beowulf style computing system for advanced guidance calculations and visualization computations. All of the design and implementation pertaining to the SEW robot discussed in this paper is the product of a student team under the summer fellowship program at the DOEs INEEL.

  11. Biologically inspired technologies in NASA's morphing project

    Science.gov (United States)

    McGowan, Anna-Maria R.; Cox, David E.; Lazos, Barry S.; Waszak, Martin R.; Raney, David L.; Siochi, Emilie J.; Pao, S. Paul

    2003-07-01

    For centuries, biology has provided fertile ground for hypothesis, discovery, and inspiration. Time-tested methods used in nature are being used as a basis for several research studies conducted at the NASA Langley Research Center as a part of Morphing Project, which develops and assesses breakthrough vehicle technologies. These studies range from low drag airfoil design guided by marine and avian morphologies to soaring techniques inspired by birds and the study of small flexible wing vehicles. Biology often suggests unconventional yet effective approaches such as non-planar wings, dynamic soaring, exploiting aeroelastic effects, collaborative control, flapping, and fibrous active materials. These approaches and other novel technologies for future flight vehicles are being studied in NASA's Morphing Project. This paper will discuss recent findings in the aeronautics-based, biologically-inspired research in the project.

  12. Biologically inspired self-organizing networks

    Institute of Scientific and Technical Information of China (English)

    Naoki WAKAMIYA; Kenji LEIBNITZ; Masayuki MURATA

    2009-01-01

    Information networks are becoming more and more complex to accommodate a continuously increasing amount of traffic and networked devices, as well as having to cope with a growing diversity of operating environments and applications. Therefore, it is foreseeable that future information networks will frequently face unexpected problems, some of which could lead to the complete collapse of a network. To tackle this problem, recent attempts have been made to design novel network architectures which achieve a high level of scalability, adaptability, and robustness by taking inspiration from self-organizing biological systems. The objective of this paper is to discuss biologically inspired networking technologies.

  13. A Biologically Inspired CMOS Image Sensor

    CERN Document Server

    Sarkar, Mukul

    2013-01-01

    Biological systems are a source of inspiration in the development of small autonomous sensor nodes. The two major types of optical vision systems found in nature are the single aperture human eye and the compound eye of insects. The latter are among the most compact and smallest vision sensors. The eye is a compound of individual lenses with their own photoreceptor arrays.  The visual system of insects allows them to fly with a limited intelligence and brain processing power. A CMOS image sensor replicating the perception of vision in insects is discussed and designed in this book for industrial (machine vision) and medical applications. The CMOS metal layer is used to create an embedded micro-polarizer able to sense polarization information. This polarization information is shown to be useful in applications like real time material classification and autonomous agent navigation. Further the sensor is equipped with in pixel analog and digital memories which allow variation of the dynamic range and in-pixel b...

  14. How physics can inspire biology

    Science.gov (United States)

    Kornyshev, Alexei

    2009-07-01

    In July 1997 Adrian Parsegian, a biophysicist at the National Institutes of Health in the US and a former president of the Biophysical Society, published an article in Physics Today in which he outlined his thoughts about the main obstacles to a happy marriage between physics and biology. Parsegian started his article with a joke about a physicist talking to his biology-trained friend.

  15. Biologically Inspired Micro-Flight Research

    Science.gov (United States)

    Raney, David L.; Waszak, Martin R.

    2003-01-01

    Natural fliers demonstrate a diverse array of flight capabilities, many of which are poorly understood. NASA has established a research project to explore and exploit flight technologies inspired by biological systems. One part of this project focuses on dynamic modeling and control of micro aerial vehicles that incorporate flexible wing structures inspired by natural fliers such as insects, hummingbirds and bats. With a vast number of potential civil and military applications, micro aerial vehicles represent an emerging sector of the aerospace market. This paper describes an ongoing research activity in which mechanization and control concepts for biologically inspired micro aerial vehicles are being explored. Research activities focusing on a flexible fixed- wing micro aerial vehicle design and a flapping-based micro aerial vehicle concept are presented.

  16. A Biologically Inspired CMOS Image Sensor

    NARCIS (Netherlands)

    Sarkar, M.

    2011-01-01

    Biological systems are a source of inspiration in the development of small autonomous sensor nodes. The two major types of optical vision systems found in nature are the single aperture human eye and the compound eye of insects. The latter are among the most compact and smallest vision sensors. The

  17. Biology-Inspired Autonomous Control

    Science.gov (United States)

    2011-08-31

    of, and perhaps will not be tolerated in, manmade critical systems. Although this paper does not directly address questions of ethics associated...political, ethical , and moral issues associated with the use of autonomous systems in warfare will be debated long after the technology hurdles to...accessible discussion on the interplay of biochemistry, genetics and embryology in animal evolution; Wagner, 2005 describes biological concepts of

  18. A biologically inspired MANET architecture

    Science.gov (United States)

    Kershenbaum, Aaron; Pappas, Vasileios; Lee, Kang-Won; Lio, Pietro; Sadler, Brian; Verma, Dinesh

    2008-04-01

    Mobile Ad-Hoc Networks (MANETs), that do not rely on pre-existing infrastructure and that can adapt rapidly to changes in their environment, are coming into increasingly wide use in military applications. At the same time, the large computing power and memory available today even for small, mobile devices, allows us to build extremely large, sophisticated and complex networks. Such networks, however, and the software controlling them are potentially vulnerable to catastrophic failures because of their size and complexity. Biological networks have many of these same characteristics and are potentially subject to the same problems. But in successful organisms, these biological networks do in fact function well so that the organism can survive. In this paper, we present a MANET architecture developed based on a feature, called homeostasis, widely observed in biological networks but not ordinarily seen in computer networks. This feature allows the network to switch to an alternate mode of operation under stress or attack and then return to the original mode of operation after the problem has been resolved. We explore the potential benefits such an architecture has, principally in terms of the ability to survive radical changes in its environment using an illustrative example.

  19. Biology-inspired AMO physics

    Science.gov (United States)

    Mathur, Deepak

    2015-01-01

    This Topical Review presents an overview of increasingly robust interconnects that are being established between atomic, molecular and optical (AMO) physics and the life sciences. AMO physics, outgrowing its historical role as a facilitator—a provider of optical methodologies, for instance—now seeks to partner biology in its quest to link systems-level descriptions of biological entities to insights based on molecular processes. Of course, perspectives differ when AMO physicists and biologists consider various processes. For instance, while AMO physicists link molecular properties and dynamics to potential energy surfaces, these have to give way to energy landscapes in considerations of protein dynamics. But there are similarities also: tunnelling and non-adiabatic transitions occur both in protein dynamics and in molecular dynamics. We bring to the fore some such differences and similarities; we consider imaging techniques based on AMO concepts, like 4D fluorescence microscopy which allows access to the dynamics of cellular processes, multiphoton microscopy which offers a built-in confocality, and microscopy with femtosecond laser beams to saturate the suppression of fluorescence in spatially controlled fashion so as to circumvent the diffraction limit. Beyond imaging, AMO physics contributes with optical traps that probe the mechanical and dynamical properties of single ‘live’ cells, highlighting differences between healthy and diseased cells. Trap methodologies have also begun to probe the dynamics governing of neural stem cells adhering to each other to form neurospheres and, with squeezed light to probe sub-diffusive motion of yeast cells. Strong field science contributes not only by providing a source of energetic electrons and γ-rays via laser-plasma accelerations schemes, but also via filamentation and supercontinuum generation, enabling mainstream collision physics into play in diverse processes like DNA damage induced by low-energy collisions to

  20. Additive manufacturing of biologically-inspired materials.

    Science.gov (United States)

    Studart, André R

    2016-01-21

    Additive manufacturing (AM) technologies offer an attractive pathway towards the fabrication of functional materials featuring complex heterogeneous architectures inspired by biological systems. In this paper, recent research on the use of AM approaches to program the local chemical composition, structure and properties of biologically-inspired materials is reviewed. A variety of structural motifs found in biological composites have been successfully emulated in synthetic systems using inkjet-based, direct-writing, stereolithography and slip casting technologies. The replication in synthetic systems of design principles underlying such structural motifs has enabled the fabrication of lightweight cellular materials, strong and tough composites, soft robots and autonomously shaping structures with unprecedented properties and functionalities. Pushing the current limits of AM technologies in future research should bring us closer to the manufacturing capabilities of living organisms, opening the way for the digital fabrication of advanced materials with superior performance, lower environmental impact and new functionalities.

  1. Biologically Inspired Intercellular Slot Synchronization

    Directory of Open Access Journals (Sweden)

    Alexander Tyrrell

    2009-01-01

    Full Text Available The present article develops a decentralized interbase station slot synchronization algorithm suitable for cellular mobile communication systems. The proposed cellular firefly synchronization (CelFSync algorithm is derived from the theory of pulse-coupled oscillators, common to describe synchronization phenomena in biological systems, such as the spontaneous synchronization of fireflies. In order to maintain synchronization among base stations (BSs, even when there is no direct link between adjacent BSs, some selected user terminals (UTs participate in the network synchronization process. Synchronization emerges by exchanging two distinct synchronization words, one transmitted by BSs and the other by active UTs, without any a priori assumption on the initial timing misalignments of BSs and UTs. In large-scale networks with inter-BS site distances up to a few kilometers, propagation delays severely affect the attainable timing accuracy of CelFSync. We show that by an appropriate combination of CelFSync with the timing advance procedure, which aligns uplink transmission of UTs to arrive simultaneously at the BS, a timing accuracy within a fraction of the inter-BS propagation delay is retained.

  2. Biologically inspired coupled antenna beampattern design

    Energy Technology Data Exchange (ETDEWEB)

    Akcakaya, Murat; Nehorai, Arye, E-mail: makcak2@ese.wustl.ed, E-mail: nehorai@ese.wustl.ed [Department of Electrical and Systems Engineering, Washington University in St Louis, St Louis, MO 63130 (United States)

    2010-12-15

    We propose to design a small-size transmission-coupled antenna array, and corresponding radiation pattern, having high performance inspired by the female Ormia ochracea's coupled ears. For reproduction purposes, the female Ormia is able to locate male crickets' call accurately despite the small distance between its ears compared with the incoming wavelength. This phenomenon has been explained by the mechanical coupling between the Ormia's ears, which has been modeled by a pair of differential equations. In this paper, we first solve these differential equations governing the Ormia ochracea's ear response, and convert the response to the pre-specified radio frequencies. We then apply the converted response of the biological coupling in the array factor of a uniform linear array composed of finite-length dipole antennas, and also include the undesired electromagnetic coupling due to the proximity of the elements. Moreover, we propose an algorithm to optimally choose the biologically inspired coupling for maximum array performance. In our numerical examples, we compute the radiation intensity of the designed system for binomial and uniform ordinary end-fire arrays, and demonstrate the improvement in the half-power beamwidth, sidelobe suppression and directivity of the radiation pattern due to the biologically inspired coupling.

  3. Natural Scene Classification Inspired by Visual Perception and Cognition Mechanisms

    Institute of Scientific and Technical Information of China (English)

    ZHANG Rui

    2011-01-01

    The process of human natural scene categorization consists of two correlated stages: visual perception and visual cognition of natural scenes. Inspired by this fact, we propose a biologically plausible approach for natural scene image classification. This approach consists of one visual perception model and two visual cognition models. The visual perception model, composed of two steps, is used to extract discriminative features from natural scene images. In the first step, we mimic the oriented and bandpass properties of human primary visual cortex by a special complex wavelets transform, which can decompose a natural scene image into a series of 2D spatial structure signals. In the second step, a hybrid statistical feature extraction method is used to generate gist features from those 2D spatial structure signals. Then we design a cognitive feedback model to realize adaptive optimization for the visual perception model. At last, we build a multiple semantics based cognition model to imitate human cognitive mode in rapid natural scene categorization. Experiments on natural scene datasets show that the proposed method achieves high efficiency and accuracy for natural scene classification.

  4. Biologically inspired autonomouse system; Seibutsugata jiritsu system

    Energy Technology Data Exchange (ETDEWEB)

    Yuta, S. [Tsukuba Univ., Ibaraki (Japan)

    1996-04-10

    The intelligence robot was begun to try to make up a machine to imitate the human intelligent actions as a model of human thoughts. However, robots created with the results of traditional artificial intelligence based on the logical knowledge impression and logic judgement have been found to be unable to realize the usual actions conducted by humans and animals even though having superior brains or remembrances. Research on `The biological inspired autonomous robots` in the intelligence robots, aims to peruse a method to realize on a machine not for high class intelligence capable to execute logical thoughts down by human but for intelligence corresponding to ability response to environment autonomously and to live in a given environment which is had even by animals except human being. Here is examined on the non-human biological type robot and its intelligence under a center of research on the biological inspired autonomous system in the intelligence robots, and is outlined on their research field. 2 refs., 1 fig.

  5. Biological Inspiration in Human Centred Robotics

    Institute of Scientific and Technical Information of China (English)

    HU Huo-sheng; LIU Jin-dong; Calderon Carlos A

    2004-01-01

    Human centred robotics (HCR) concerns with the development of various kinds of intelligent systems and robots that will be used in environments coexisting with humans. These systems and robots will be interactive and useful assistants/companions for people in different ages, situations, activities and environments in order to improve the quality of life. This paper presents the autors' current research work toward the development of advanced theory and technologies for HCR applications, based on inspiration from biological systems. More specifically, both bio-mimetic system modelling and robot learning by imitation are discussed respectively, and some preliminary results are demonstrated.

  6. Bio-Inspired Sampling and Reconstruction Framework for Scientific Visualization

    Science.gov (United States)

    2015-09-17

    AFRL-AFOSR-VA-TR-2015-0287 Bio - Inspired Sampling and Reconstruction Framework for Scientific Visualization Alireza Entezari UNIVERSITY OF FLORIDA...TITLE AND SUBTITLE A Bio - inspired Sampling and Reconstruction Framework for Scientific Visualization 5a. CONTRACT NUMBER 5b. GRANT NUMBER FA9550...invariant representation, one can increase the quality of signal reconstruction. Moreover, the computational cost of the reconstruction process is

  7. Biologically inspired emotion recognition from speech

    Science.gov (United States)

    Caponetti, Laura; Buscicchio, Cosimo Alessandro; Castellano, Giovanna

    2011-12-01

    Emotion recognition has become a fundamental task in human-computer interaction systems. In this article, we propose an emotion recognition approach based on biologically inspired methods. Specifically, emotion classification is performed using a long short-term memory (LSTM) recurrent neural network which is able to recognize long-range dependencies between successive temporal patterns. We propose to represent data using features derived from two different models: mel-frequency cepstral coefficients (MFCC) and the Lyon cochlear model. In the experimental phase, results obtained from the LSTM network and the two different feature sets are compared, showing that features derived from the Lyon cochlear model give better recognition results in comparison with those obtained with the traditional MFCC representation.

  8. Biologically inspired emotion recognition from speech

    Directory of Open Access Journals (Sweden)

    Buscicchio Cosimo

    2011-01-01

    Full Text Available Abstract Emotion recognition has become a fundamental task in human-computer interaction systems. In this article, we propose an emotion recognition approach based on biologically inspired methods. Specifically, emotion classification is performed using a long short-term memory (LSTM recurrent neural network which is able to recognize long-range dependencies between successive temporal patterns. We propose to represent data using features derived from two different models: mel-frequency cepstral coefficients (MFCC and the Lyon cochlear model. In the experimental phase, results obtained from the LSTM network and the two different feature sets are compared, showing that features derived from the Lyon cochlear model give better recognition results in comparison with those obtained with the traditional MFCC representation.

  9. Biology-inspired Architecture for Situation Management

    Science.gov (United States)

    Jones, Kennie H.; Lodding, Kenneth N.; Olariu, Stephan; Wilson, Larry; Xin, Chunsheng

    2006-01-01

    Situation Management is a rapidly developing science combining new techniques for data collection with advanced methods of data fusion to facilitate the process leading to correct decisions prescribing action. Current research focuses on reducing increasing amounts of diverse data to knowledge used by decision makers and on reducing time between observations, decisions and actions. No new technology is more promising for increasing the diversity and fidelity of observations than sensor networks. However, current research on sensor networks concentrates on a centralized network architecture. We believe this trend will not realize the full potential of situation management. We propose a new architecture modeled after biological ecosystems where motes are autonomous and intelligent, yet cooperate with local neighborhoods. Providing a layered approach, they sense and act independently when possible, and cooperate with neighborhoods when necessary. The combination of their local actions results in global effects. While situation management research is currently dominated by military applications, advances envisioned for industrial and business applications have similar requirements. NASA has requirements for intelligent and autonomous systems in future missions that can benefit from advances in situation management. We describe requirements for the Integrated Vehicle Health Management program where our biology-inspired architecture provides a layered approach and decisions can be made at the proper level to improve safety, reduce costs, and improve efficiency in making diagnostic and prognostic assessments of the structural integrity, aerodynamic characteristics, and operation of aircraft.

  10. Biologically Inspired Purification and Dispersion of SWCNTs

    Science.gov (United States)

    Feeback, Daniel L.; Clarke, Mark S.; Nikolaev, Pavel

    2009-01-01

    A biologically inspired method has been developed for (1) separating single-wall carbon nanotubes (SWCNTs) from other materials (principally, amorphous carbon and metal catalysts) in raw production batches and (2) dispersing the SWCNTs as individual particles (in contradistinction to ropes and bundles) in suspension, as required for a number of applications. Prior methods of purification and dispersal of SWCNTs involve, variously, harsh physical processes (e.g., sonication) or harsh chemical processes (e.g., acid reflux). These processes do not completely remove the undesired materials and do not disperse bundles and ropes into individual suspended SWCNTs. Moreover, these processes cut long SWCNTs into shorter pieces, yielding typical nanotube lengths between 150 and 250 nm. In contrast, the present method does not involve harsh physical or chemical processes. The method involves the use of biologically derived dispersal agents (BDDAs) in an aqueous solution that is mechanically homogenized (but not sonicated) and centrifuged. The dense solid material remaining after centrifugation is resuspended by vortexing in distilled water, yielding an aqueous suspension of individual, separated SWCNTs having lengths from about 10 to about 15 microns.

  11. Biologically inspired robots as artificial inspectors

    Science.gov (United States)

    Bar-Cohen, Yoseph

    2002-06-01

    Imagine an inspector conducting an NDE on an aircraft where you notice something is different about him - he is not real but rather he is a robot. Your first reaction would probably be to say 'it's unbelievable but he looks real' just as you would react to an artificial flower that is a good imitation. This science fiction scenario could become a reality at the trend in the development of biologically inspired technologies, and terms like artificial intelligence, artificial muscles, artificial vision and numerous others are increasingly becoming common engineering tools. For many years, the trend has been to automate processes in order to increase the efficiency of performing redundant tasks where various systems have been developed to deal with specific production line requirements. Realizing that some parts are too complex or delicate to handle in small quantities with a simple automatic system, robotic mechanisms were developed. Aircraft inspection has benefitted from this evolving technology where manipulators and crawlers are developed for rapid and reliable inspection. Advancement in robotics towards making them autonomous and possibly look like human, can potentially address the need to inspect structures that are beyond the capability of today's technology with configuration that are not predetermined. The operation of these robots may take place at harsh or hazardous environments that are too dangerous for human presence. Making such robots is becoming increasingly feasible and in this paper the state of the art will be reviewed.

  12. Case study on visualizing hurricanes using illustration-inspired techniques.

    Science.gov (United States)

    Joshi, Alark; Caban, Jesus; Rheingans, Penny; Sparling, Lynn

    2009-01-01

    The devastating power of hurricanes was evident during the 2005 hurricane season, the most active season on record. This has prompted increased efforts by researchers to understand the physical processes that underlie the genesis, intensification, and tracks of hurricanes. This research aims at facilitating an improved understanding into the structure of hurricanes with the aid of visualization techniques. Our approach was developed by a mixed team of visualization and domain experts. To better understand these systems, and to explore their representation in NWP models, we use a variety of illustration-inspired techniques to visualize their structure and time evolution. Illustration-inspired techniques aid in the identification of the amount of vertical wind shear in a hurricane, which can help meteorologists predict dissipation. Illustration-style visualization, in combination with standard visualization techniques, helped explore the vortex rollup phenomena and the mesovortices contained within. We evaluated the effectiveness of our visualization with the help of six hurricane experts. The expert evaluation showed that the illustration-inspired techniques were preferred over existing tools. Visualization of the evolution of structural features is a prelude to a deeper visual analysis of the underlying dynamics.

  13. Dynamical Systems and Control Theory Inspired by Molecular Biology

    Science.gov (United States)

    2014-10-02

    in both bacterial and eukaryotic signaling pathways. A common theme in the systems biology literature is that certain systems whose output variables...AFRL-OSR-VA-TR-2014-0282 DYNAMICAL SYSTEMS AND CONTROL THEORY INSPIRED BY MOLECULAR BIOLOGY Eduardo Sontag RUTGERS THE STATE UNIVERSITY OF NEW JERSEY...Standard Form 298 (Re . 8-98) v Prescribed by ANSI Std. Z39.18 DYNAMICAL SYSTEMS AND CONTROL THEORY INSPIRED BY MOLECULAR BIOLOGY AFOSR FA9550-11-1-0247

  14. Biologically Inspired Flagella-Templated Silica Nanotubes

    Science.gov (United States)

    Jo, Wonjin

    The desire and need for various types of nanostructures have been met with challenges of feasibility, reproducibility, and long fabrication time. To work towards improved bottom-up methods of nanofabrication, bacterial flagella are particularly attractive bio-templates for nanotubes due to their tubular structures and small inner and outer diameters. In this work, flagella isolated from Salmonella typhimurium are used as bio-templates to fabricate silica mineralized nanotubes. The process involves as well-controlled hydrolysis and condensation reaction with aminopropyltriethoxysilane (APTES), followed by the addition of tetraethoxysilane (TEOS). By controlling the concentration of TEOS and the reaction time, a simple and precise method is developed for creating silica-mineralized flagella nanotubes (SMFNs) with various thicknesses of the silica layer. In addition, the SMFNs are further modified to multifunctional nanotubes by coating metal nanoparticles (NPs) or metal oxide NPs such as gold, palladium, and iron oxide. The metallized SMFNs are achieved through reactions including reductive metallization or oxidative hydrolysis. The results from these studies provide evidence for the complete coating of SMFNs with uniform metal NP sizes and high surface area coverage. The metallized SMFNs are found to be electrically conductive along their network structures. The current-voltage characteristics show remarkably improved electrical conductivities depending on the types of metal NPs loading and SMFN networks concentration. The biologically inspired SMFNs with metal loading will allow have controlled electrical properties that can lead to the potential of creating unique and precise nanoelectronic materials. Lastly, the randomly entangled SMFNs are characterized to demonstrate their capabilities for hydrophilic and hydrophobic surface applications.

  15. Biologically inspired highly efficient buoyancy engine

    Science.gov (United States)

    Akle, Barbar; Habchi, Wassim; Abdelnour, Rita; Blottman, John, III; Leo, Donald

    2012-04-01

    Undersea distributed networked sensor systems require a miniaturization of platforms and a means of both spatial and temporal persistence. One aspect of this system is the necessity to modulate sensor depth for optimal positioning and station-keeping. Current approaches involve pneumatic bladders or electrolysis; both require mechanical subsystems and consume significant power. These are not suitable for the miniaturization of sensor platforms. Presented in this study is a novel biologically inspired method that relies on ionic motion and osmotic pressures to displace a volume of water from the ocean into and out of the proposed buoyancy engine. At a constant device volume, the displaced water will alter buoyancy leading to either sinking or floating. The engine is composed of an enclosure sided on the ocean's end by a Nafion ionomer and by a flexible membrane separating the water from a gas enclosure. Two electrodes are placed one inside the enclosure and the other attached to the engine on the outside. The semi-permeable membrane Nafion allows water motion in and out of the enclosure while blocking anions from being transferred. The two electrodes generate local concentration changes of ions upon the application of an electrical field; these changes lead to osmotic pressures and hence the transfer of water through the semi-permeable membrane. Some aquatic organisms such as pelagic crustacean perform this buoyancy control using an exchange of ions through their tissue to modulate its density relative to the ambient sea water. In this paper, the authors provide an experimental proof of concept of this buoyancy engine. The efficiency of changing the engine's buoyancy is calculated and optimized as a function of electrode surface area. For example electrodes made of a 3mm diameter Ag/AgCl proved to transfer approximately 4mm3 of water consuming 4 Joules of electrical energy. The speed of displacement is optimized as a function of the surface area of the Nafion

  16. Self-organization, embodiment, and biologically inspired robotics.

    Science.gov (United States)

    Pfeifer, Rolf; Lungarella, Max; Iida, Fumiya

    2007-11-16

    Robotics researchers increasingly agree that ideas from biology and self-organization can strongly benefit the design of autonomous robots. Biological organisms have evolved to perform and survive in a world characterized by rapid changes, high uncertainty, indefinite richness, and limited availability of information. Industrial robots, in contrast, operate in highly controlled environments with no or very little uncertainty. Although many challenges remain, concepts from biologically inspired (bio-inspired) robotics will eventually enable researchers to engineer machines for the real world that possess at least some of the desirable properties of biological organisms, such as adaptivity, robustness, versatility, and agility.

  17. Ontologies in biological data visualization.

    Science.gov (United States)

    Carpendale, Sheelagh; Chen, Min; Evanko, Daniel; Gehlenborg, Nils; Gorg, Carsten; Hunter, Larry; Rowland, Francis; Storey, Margaret-Anne; Strobelt, Hendrik

    2014-01-01

    In computer science, an ontology is essentially a graph-based knowledge representation in which each node corresponds to a concept and each edge specifies a relation between two concepts. Ontological development in biology can serve as a focus to discuss the challenges and possible research directions for ontologies in visualization. The principle challenges are the dynamic and evolving nature of ontologies, the ever-present issue of scale, the diversity and richness of the relationships in ontologies, and the need to better understand the relationship between ontologies and the data analysis tasks scientists wish to support. Research directions include visualizing ontologies; visualizing semantically or ontologically annotated texts, documents, and corpora; automated generation of visualizations using ontologies; and visualizing ontological context to support search. Although this discussion uses issues of ontologies in biological data visualization as a springboard, these topics are of general relevance to visualization.

  18. Synthetic biology, inspired by synthetic chemistry.

    Science.gov (United States)

    Malinova, V; Nallani, M; Meier, W P; Sinner, E K

    2012-07-16

    The topic synthetic biology appears still as an 'empty basket to be filled'. However, there is already plenty of claims and visions, as well as convincing research strategies about the theme of synthetic biology. First of all, synthetic biology seems to be about the engineering of biology - about bottom-up and top-down approaches, compromising complexity versus stability of artificial architectures, relevant in biology. Synthetic biology accounts for heterogeneous approaches towards minimal and even artificial life, the engineering of biochemical pathways on the organismic level, the modelling of molecular processes and finally, the combination of synthetic with nature-derived materials and architectural concepts, such as a cellular membrane. Still, synthetic biology is a discipline, which embraces interdisciplinary attempts in order to have a profound, scientific base to enable the re-design of nature and to compose architectures and processes with man-made matter. We like to give an overview about the developments in the field of synthetic biology, regarding polymer-based analogs of cellular membranes and what questions can be answered by applying synthetic polymer science towards the smallest unit in life, namely a cell.

  19. Patented Biologically-inspired Technological Innovations: A Twenty Year View

    Institute of Scientific and Technical Information of China (English)

    Richard H. C. Bonser

    2006-01-01

    Publication rate of patents can be a useful measure of innovation and productivity in fields of science and technology. To assess the growth in industrially-important research, I conducted an appraisal of patents published between 1985 and 2005 on online databases using keywords chosen to select technologies arising as a result of biological inspiration. Whilst the total number of patents increased over the period examined, those with biomimetic content had increased faster as a proportion of total patent publications. Logistic regression analysis reveals that we may be a little over half way through an initial innovation cycle inspired by biological systems.

  20. Biologically inspired LED lens from cuticular nanostructures of firefly lantern.

    Science.gov (United States)

    Kim, Jae-Jun; Lee, Youngseop; Kim, Ha Gon; Choi, Ki-Ju; Kweon, Hee-Seok; Park, Seongchong; Jeong, Ki-Hun

    2012-11-13

    Cuticular nanostructures found in insects effectively manage light for light polarization, structural color, or optical index matching within an ultrathin natural scale. These nanostructures are mainly dedicated to manage incoming light and recently inspired many imaging and display applications. A bioluminescent organ, such as a firefly lantern, helps to out-couple light from the body in a highly efficient fashion for delivering strong optical signals in sexual communication. However, the cuticular nanostructures, except the light-producing reactions, have not been well investigated for physical principles and engineering biomimetics. Here we report a unique observation of high-transmission nanostructures on a firefly lantern and its biological inspiration for highly efficient LED illumination. Both numerical and experimental results clearly reveal high transmission through the nanostructures inspired from the lantern cuticle. The nanostructures on an LED lens surface were fabricated by using a large-area nanotemplating and reconfigurable nanomolding with heat-induced shear thinning. The biologically inspired LED lens, distinct from a smooth surface lens, substantially increases light transmission over visible ranges, comparable to conventional antireflection coating. This biological inspiration can offer new opportunities for increasing the light extraction efficiency of high-power LED packages.

  1. Biologically-Inspired Water Propulsion System

    Institute of Scientific and Technical Information of China (English)

    Andrzej Sioma

    2013-01-01

    Most propulsion systems of vehicles travelling in the aquatic environment are equipped with propellers.Observations of nature,however,show that the absolute majority of organisms travel through water using wave motion,paddling or using water jet power.Inspired by these observations of nature,an innovative propulsion system working in aquatic environment was developed.This paper presents the design of the water propulsion system.Particular attention was paid to the use of paddling techniques and water jet power.A group of organisms that use those mechanisms to travel through water was selected and analysed.The results of research were used in the design of a propulsion system modelled simultaneously on two methods of movement in the aquatic environment.A method for modelling a propulsion system using a combination of the two solutions and the result were described.A conceptual design and a prototype constructed based on the solution were presented.With respect to the solution developed,studies and analyses of selected parameters of the prototype were described.

  2. A Biologically-Inspired Symmetric Bidirectional Switch

    Science.gov (United States)

    Song, Kahye; Chang, Shyr-Shea; Roper, Marcus; Kim, Hyejeong; Lee, Sang Joon

    2017-01-01

    Stimuli-sensitive hydrogels have been intensively studied because of their potential applications in drug delivery, cell culture, and actuator design. Although hydrogels with directed unidirectional response, i.e. capable of bending actuated by different chemical components reaction in response to several stimuli including water and electric fields, these hydrogels are capable of being actuated in one direction only by the stimulus. By contrast the challenge of building a device that is capable of responding to the same cue (in this case a temperature gradient) to bend in either direction remains unmet. Here, inspired by the structure of pine cone scales, we design a temperature-sensitive hydrogel with bending directed an imposed fishing line. The layers with same PNIPAAm always shrinks in response to the heat. Even the layers made with different chemical property, bends away from a warm surface, whether the warm surface is applied at its upper or lower boundary. To design the bending hydrogel we exploited the coupled responses of the hydrogel; a fishing line intercalating structure and change its construction. In addition to revealing a new capability of stimulus sensitive hydrogels, our study gives insight into the structural features of pine cone bending. PMID:28068391

  3. Biologically Inspired Robots to Assist Areonauts on the Martian Surface

    Science.gov (United States)

    Scott, G. P.; Saaj, C. M.

    Long before humans set foot on the surface of Mars, significant exploration of the surface will have been completed. Orbital spacecraft have certainly helped provide information about the surface to date, but significant advances are made through surface-based exploration. Not only does this include the Viking landers of years past, but also current and next generation mobile robots traversing the surface with scientific experiments for humans to better learn about this mostly unexplored environment. Many robotic vehicles have been proposed in recent years to assist astronauts on planetary surfaces. Only a few of these vehicles, or some aspects therein, have been inspired from biological creatures. With regards to the vehicle's locomotion system, looking into biologically inspired concepts is incredibly important because of the expectation of these astronauts exploring more complex terrain than current wheeled robotic explorers have yet traversed. This paper will review a number of robotic systems designed to assist Mars areonauts (astronauts specifically exploring Mars) before proposing a multi-purpose legged microrover assistant. This vehicle has a biologically inspired locomotion system which provides the capability to follow the areonauts over the most complex Martian terrain, or even traverse areas too complex for the areonaut to negotiate, in order to perform on-the-spot scientific experimentation as needed. The results of the biologically inspired vehicle's capability to traverse Mars terrain, both with regards to tractive capability in soil and ability to access more hostile terrain than its wheeled or tracked counterparts, will also be presented.

  4. A Project-Based Biologically-Inspired Robotics Module

    Science.gov (United States)

    Crowder, R. M.; Zauner, K.-P.

    2013-01-01

    The design of any robotic system requires input from engineers from a variety of technical fields. This paper describes a project-based module, "Biologically-Inspired Robotics," that is offered to Electronics and Computer Science students at the University of Southampton, U.K. The overall objective of the module is for student groups to…

  5. Complex biological and bio-inspired systems

    Energy Technology Data Exchange (ETDEWEB)

    Ecke, Robert E [Los Alamos National Laboratory

    2009-01-01

    The understanding and characterization ofthe fundamental processes of the function of biological systems underpins many of the important challenges facing American society, from the pathology of infectious disease and the efficacy ofvaccines, to the development of materials that mimic biological functionality and deliver exceptional and novel structural and dynamic properties. These problems are fundamentally complex, involving many interacting components and poorly understood bio-chemical kinetics. We use the basic science of statistical physics, kinetic theory, cellular bio-chemistry, soft-matter physics, and information science to develop cell level models and explore the use ofbiomimetic materials. This project seeks to determine how cell level processes, such as response to mechanical stresses, chemical constituents and related gradients, and other cell signaling mechanisms, integrate and combine to create a functioning organism. The research focuses on the basic physical processes that take place at different levels ofthe biological organism: the basic role of molecular and chemical interactions are investigated, the dynamics of the DNA-molecule and its phylogenetic role are examined and the regulatory networks of complex biochemical processes are modeled. These efforts may lead to early warning algorithms ofpathogen outbreaks, new bio-sensors to detect hazards from pathomic viruses to chemical contaminants. Other potential applications include the development of efficient bio-fuel alternative-energy processes and the exploration ofnovel materials for energy usages. Finally, we use the notion of 'coarse-graining,' which is a method for averaging over less important degrees of freedom to develop computational models to predict cell function and systems-level response to disease, chemical stress, or biological pathomic agents. This project supports Energy Security, Threat Reduction, and the missions of the DOE Office of Science through its efforts to

  6. Bio-inspired nano-sensor-enhanced CNN visual computer.

    Science.gov (United States)

    Porod, Wolfgang; Werblin, Frank; Chua, Leon O; Roska, Tamas; Rodriguez-Vazquez, Angel; Roska, Botond; Fay, Patrick; Bernstein, Gary H; Huang, Yih-Fang; Csurgay, Arpad I

    2004-05-01

    Nanotechnology opens new ways to utilize recent discoveries in biological image processing by translating the underlying functional concepts into the design of CNN (cellular neural/nonlinear network)-based systems incorporating nanoelectronic devices. There is a natural intersection joining studies of retinal processing, spatio-temporal nonlinear dynamics embodied in CNN, and the possibility of miniaturizing the technology through nanotechnology. This intersection serves as the springboard for our multidisciplinary project. Biological feature and motion detectors map directly into the spatio-temporal dynamics of CNN for target recognition, image stabilization, and tracking. The neural interactions underlying color processing will drive the development of nanoscale multispectral sensor arrays for image fusion. Implementing such nanoscale sensors on a CNN platform will allow the implementation of device feedback control, a hallmark of biological sensory systems. These biologically inspired CNN subroutines are incorporated into the new world of analog-and-logic algorithms and software, containing also many other active-wave computing mechanisms, including nature-inspired (physics and chemistry) as well as PDE-based sophisticated spatio-temporal algorithms. Our goal is to design and develop several miniature prototype devices for target detection, navigation, tracking, and robotics. This paper presents an example illustrating the synergies emerging from the convergence of nanotechnology, biotechnology, and information and cognitive science.

  7. Biologically Inspired Optimization of Building District Heating Networks

    Directory of Open Access Journals (Sweden)

    Leiming Shang

    2013-07-01

    Full Text Available In this paper we show that a biologically inspired model can be successfully applied to problems of building optimal district heating network. The model is based on physiological observations of the true slime mold Physarumpolycephalum, but can also be used for path-finding in the complicated networks of mazes and road maps. A strategy of optimally building heating distribution network was guided by the model and a well-tuned ant colony algorithm and genetic algorithm. The results indicate that although there are not large-scale efficiency savings to be made, the biologically inspired amoeboid movement model is capable of finding results of equal or better optimality than a comparable ant colony algorithm and genetic algorithm.

  8. Semiconductor Devices Inspired By and Integrated With Biology

    Energy Technology Data Exchange (ETDEWEB)

    Rogers, John [University of Illinois

    2012-04-25

    Biology is curved, soft and elastic; silicon wafers are not. Semiconductor technologies that can bridge this gap in form and mechanics will create new opportunities in devices that adopt biologically inspired designs or require intimate integration with the human body. This talk describes the development of ideas for electronics that offer the performance of state-of-the-art, wafer- based systems but with the mechanical properties of a rubber band. We explain the underlying materials science and mechanics of these approaches, and illustrate their use in (1) bio- integrated, ‘tissue-like’ electronics with unique capabilities for mapping cardiac and neural electrophysiology, and (2) bio-inspired, ‘eyeball’ cameras with exceptional imaging properties enabled by curvilinear, Petzval designs.

  9. Illustration-inspired depth enhanced volumetric medical visualization.

    Science.gov (United States)

    Svakhine, Nikolai A; Ebert, David S; Andrews, William M

    2009-01-01

    Volume illustration can be used to provide insight into source data from CT/MRI scanners in much the same way as medical illustration depicts the important details of anatomical structures. As such, proven techniques used in medical illustration should be transferable to volume illustration, providing scientists with new tools to visualize their data. In recent years, a number of techniques have been developed to enhance the rendering pipeline and create illustrative effects similar to the ones found in medical textbooks and surgery manuals. Such effects usually highlight important features of the subject while subjugating its context and providing depth cues for correct perception. Inspired by traditional visual and line-drawing techniques found in medical illustration, we have developed a collection of fast algorithms for more effective emphasis/de-emphasis of data as well as conveyance of spatial relationships. Our techniques utilize effective outlining techniques and selective depth enhancement to provide perceptual cues of object importance as well as spatial relationships in volumetric datasets. Moreover, we have used illustration principles to effectively combine and adapt basic techniques so that they work together to provide consistent visual information and a uniform style.

  10. An insect-inspired model for visual binding II: functional analysis and visual attention.

    Science.gov (United States)

    Northcutt, Brandon D; Higgins, Charles M

    2017-04-01

    We have developed a neural network model capable of performing visual binding inspired by neuronal circuitry in the optic glomeruli of flies: a brain area that lies just downstream of the optic lobes where early visual processing is performed. This visual binding model is able to detect objects in dynamic image sequences and bind together their respective characteristic visual features-such as color, motion, and orientation-by taking advantage of their common temporal fluctuations. Visual binding is represented in the form of an inhibitory weight matrix which learns over time which features originate from a given visual object. In the present work, we show that information represented implicitly in this weight matrix can be used to explicitly count the number of objects present in the visual image, to enumerate their specific visual characteristics, and even to create an enhanced image in which one particular object is emphasized over others, thus implementing a simple form of visual attention. Further, we present a detailed analysis which reveals the function and theoretical limitations of the visual binding network and in this context describe a novel network learning rule which is optimized for visual binding.

  11. Artificial heartbeat: design and fabrication of a biologically inspired pump.

    Science.gov (United States)

    Walters, Peter; Lewis, Amy; Stinchcombe, Andrew; Stephenson, Robert; Ieropoulos, Ioannis

    2013-12-01

    We present a biologically inspired actuator exhibiting a novel pumping action. The design of the 'artificial heartbeat' actuator is inspired by physical principles derived from the structure and function of the human heart. The actuator employs NiTi artificial muscles and is powered by electrical energy generated by microbial fuel cells (MFCs). We describe the design and fabrication of the actuator and report the results of tests conducted to characterize its performance. This is the first artificial muscle-driven pump to be powered by MFCs fed on human urine. Results are presented in terms of the peak pumping pressure generated by the actuator, as well as for the volume of fluid transferred, when the actuator was powered by energy stored in a capacitor bank, which was charged by 24 MFCs fed on urine. The results demonstrate the potential for the artificial heartbeat actuator to be employed as a fluid circulation pump in future generations of MFC-powered robots ('EcoBots') that extract energy from organic waste. We also envisage that the actuator could in the future form part of a bio-robotic artwork or 'bio-automaton' that could help increase public awareness of research in robotics, bio-energy and biologically inspired design.

  12. Bits from Brains for Biologically-Inspired Computing

    Directory of Open Access Journals (Sweden)

    Michael eWibral

    2015-03-01

    Full Text Available Inspiration for artificial biologically-inspired computing is often drawn from neural systems. This article shows how to analyze neural systems using information theory with the aim of obtaining constraints that help to identify the algorithms run by neural systems and the information they represent. Algorithms and representations identified this way may then guide the design of biologically inspired computing systems. The material covered includes the necessary introduction to information theory and to the estimation of information theoretic quantities from neural recordings. We then show how to analyze the information encoded in a system about its environment, and also discuss recent methodological developments on the question of how much information each agent carries about the environment either uniquely, or redundantly or synergistically together with others. Last, we introduce the framework of local information dynamics, where information processing is partitioned into component processes of information storage, transfer, and modification -- locally in space and time. We close by discussing example applications of these measures to neural data and other complex systems.

  13. Editorial:Mechanics of biological and bio-inspired materials%Editorial: Mechanics of biological and bio-inspired materials

    Institute of Scientific and Technical Information of China (English)

    Baohua Jia

    2012-01-01

    The field of mechanics of biological and bio-inspired materials underwent an exciting development over the past several years,which made it stand at the cutting edge of both engineering mechanics and biomechanics.As an intriguing interdisciplinary research field,it aims at elucidating the fundamental principles in nature's design of strong,multi-functional and smart Materials by focusing on the assembly,deformation,stability and failure of the materials.These principles should have wide applications in not only material sciences and mechanical engineering but also biomedical engineering.For instance,the knowledge in Mechanical principles of biological materials is very helpful for addressing some major challenges in material sciences and engineering.They also have the potential to provide quantitative understanding about how forces and deformation affect human being's health,diseases and treatment at tissue,cellular and molecular levels.This special subject on "mechanics of biological and bio-inspired materials" collects a few studies on recent development by leading scientists in this field.The biological materials or systems in these studies include cell,cytoskeleton (e.g.,microtubulus,intermediate filaments),lipid molecules and composite system of lipid and nanoparticle,tissue,and biological attachment systems,etc.

  14. Biologically-inspired Learning in Pulsed Neural Networks

    DEFF Research Database (Denmark)

    Lehmann, Torsten; Woodburn, Robin

    1999-01-01

    Self-learning chips to implement many popular ANN (artificial neural network) algorithms are very difficult to design. We explain why this is so and say what lessons previous work teaches us in the design of self-learning systems. We offer a contribution to the `biologically-inspired' approach......, explaining what we mean by this term and providing an example of a robust, self-learning design that can solve simple classical-conditioning tasks. We give details of the design of individual circuits to perform component functions, which can then be combined into a network to solve the task. We argue...

  15. 7th World Congress on Nature and Biologically Inspired Computing

    CERN Document Server

    Engelbrecht, Andries; Abraham, Ajith; Plessis, Mathys; Snášel, Václav; Muda, Azah

    2016-01-01

    World Congress on Nature and Biologically Inspired Computing (NaBIC) is organized to discuss the state-of-the-art as well as to address various issues with respect to Nurturing Intelligent Computing Towards Advancement of Machine Intelligence. This Volume contains the papers presented in the Seventh World Congress (NaBIC’15) held in Pietermaritzburg, South Africa during December 01-03, 2015. The 39 papers presented in this Volume were carefully reviewed and selected. The Volume would be a valuable reference to researchers, students and practitioners in the computational intelligence field.

  16. Kirigami artificial muscles with complex biologically inspired morphologies

    Science.gov (United States)

    Sareh, Sina; Rossiter, Jonathan

    2013-01-01

    In this paper we present bio-inspired smart structures which exploit the actuation of flexible ionic polymer composites and the kirigami design principle. Kirigami design is used to convert planar actuators into active 3D structures capable of large out-of-plane displacement and that replicate biological mechanisms. Here we present the burstbot, a fluid control and propulsion mechanism based on the atrioventricular cuspid valve, and the vortibot, a spiral actuator based on Vorticella campanula, a ciliate protozoa. Models derived from biological counterparts are used as a platform for design optimization and actuator performance measurement. The symmetric and asymmetric fluid interactions of the burstbot are investigated and the effectiveness in fluid transport applications is demonstrated. The vortibot actuator is geometrically optimized as a camera positioner capable of 360° scanning. Experimental results for a one-turn spiral actuator show complex actuation derived from a single degree of freedom control signal.

  17. An efficient biologically-inspired photocell enhanced by quantum coherence

    CERN Document Server

    Creatore, C; Emmott, S; Chin, A W

    2013-01-01

    Artificially reproducing the biological light reactions responsible for the remarkably efficient photon-to-charge conversion in photosynthetic complexes represents a new direction for the future development of photovoltaic devices. Here, we develop such a paradigm and present a model photocell based on the nanoscale architecture of photosynthetic reaction centres that explicitly harnesses the quantum mechanical effects recently discovered in photosynthetic complexes. Quantum interference of photon absorption/emission induced by the dipole-dipole interaction between molecular excited states guarantees an enhanced light-to-current conversion and power generation for a wide range of realistic parameters, opening a promising new route for designing artificial light-harvesting devices inspired by biological photosynthesis and quantum technologies.

  18. Visual Cortex Inspired CNN Model for Feature Construction in Text Analysis

    Science.gov (United States)

    Fu, Hongping; Niu, Zhendong; Zhang, Chunxia; Ma, Jing; Chen, Jie

    2016-01-01

    Recently, biologically inspired models are gradually proposed to solve the problem in text analysis. Convolutional neural networks (CNN) are hierarchical artificial neural networks, which include a various of multilayer perceptrons. According to biological research, CNN can be improved by bringing in the attention modulation and memory processing of primate visual cortex. In this paper, we employ the above properties of primate visual cortex to improve CNN and propose a biological-mechanism-driven-feature-construction based answer recommendation method (BMFC-ARM), which is used to recommend the best answer for the corresponding given questions in community question answering. BMFC-ARM is an improved CNN with four channels respectively representing questions, answers, asker information and answerer information, and mainly contains two stages: biological mechanism driven feature construction (BMFC) and answer ranking. BMFC imitates the attention modulation property by introducing the asker information and answerer information of given questions and the similarity between them, and imitates the memory processing property through bringing in the user reputation information for answerers. Then the feature vector for answer ranking is constructed by fusing the asker-answerer similarities, answerer's reputation and the corresponding vectors of question, answer, asker, and answerer. Finally, the Softmax is used at the stage of answer ranking to get best answers by the feature vector. The experimental results of answer recommendation on the Stackexchange dataset show that BMFC-ARM exhibits better performance. PMID:27471460

  19. Visual cortex inspired CNN model for feature construction in text analysis

    Directory of Open Access Journals (Sweden)

    Hongping Fu

    2016-07-01

    Full Text Available Recently, biologically inspired models are gradually proposed to solve the problem in text analysis. Convolutional neural networks (CNN are hierarchical artificial neural networks, which include a various of multilayer perceptrons. According to biological research, CNN can be improved by bringing in the attention modulation and memory processing of primate visual cortex. In this paper, we employ the above properties of primate visual cortex to improve CNN and propose a biological-mechanism-driven-feature-construction based answer recommendation method (BMFC-ARM, which is used to recommend the best answer for the corresponding given questions in community question answering. BMFC-ARM is an improved CNN with four channels respectively representing questions, answers, asker information and answerer information, and mainly contains two stages: biological mechanism driven feature construction (BMFC and answer ranking. BMFC imitates the attention modulation property by introducing the asker information and answerer information of given questions and the similarity between them, and imitates the memory processing property through bringing in the user reputation information for answerers. Then the feature vector for answer ranking is constructed by fusing the asker-answerer similarities, answerer's reputation and the corresponding vectors of question, answer, asker and answerer. Finally, the Softmax is used at the stage of answer ranking to get best answers by the feature vector. The experimental results of answer recommendation on the Stackexchange dataset show that BMFC-ARM exhibits better performance.

  20. Platensimycin and platencin: Inspirations for chemistry, biology, enzymology, and medicine.

    Science.gov (United States)

    Rudolf, Jeffrey D; Dong, Liao-Bin; Shen, Ben

    2016-11-16

    Natural products have served as the main source of drugs and drug leads, and natural products produced by microorganisms are one of the most prevalent sources of clinical antibiotics. Their unparalleled structural and chemical diversities provide a basis to investigate fundamental biological processes while providing access to a tremendous amount of chemical space. There is a pressing need for novel antibiotics with new mode of actions to combat the growing challenge of multidrug resistant pathogens. This review begins with the pioneering discovery and biological activities of platensimycin (PTM) and platencin (PTN), two antibacterial natural products isolated from Streptomyces platensis. The elucidation of their unique biochemical mode of action, structure-activity relationships, and pharmacokinetics is presented to highlight key aspects of their biological activities. It then presents an overview of how microbial genomics has impacted the field of PTM and PTN and revealed paradigm-shifting discoveries in terpenoid biosynthesis, fatty acid metabolism, and antibiotic and antidiabetic therapies. It concludes with a discussion covering the future perspectives of PTM and PTN in regard to natural products discovery, bacterial diterpenoid biosynthesis, and the pharmaceutical promise of PTM and PTN as antibiotics and for the treatment of metabolic disorders. PTM and PTN have inspired new discoveries in chemistry, biology, enzymology, and medicine and will undoubtedly continue to do so.

  1. Bio-inspired motion estimation – From modelling to evaluation, can biology be a source of inspiration?

    OpenAIRE

    Tlapale, Émilien; Kornprobst, Pierre; Masson, Guillaume; Faugeras, Olivier; Bouecke, Jan,; Neumann, Heiko

    2010-01-01

    We propose a bio-inspired approach to motion estimation based on recent neuroscience findings concerning the motion pathway. Our goal is to identify the key biological features in order to reach a good compromise between bio-inspiration and computational efficiency. Here we choose the neural field formalism which provides a sound mathematical framework to describe the model at a macroscopic scale. Within this framework we define the cortical activity as coupled integro-differential equations ...

  2. Adaptive Fuzzy-Lyapunov Controller Using Biologically Inspired Swarm Intelligence

    Directory of Open Access Journals (Sweden)

    Alejandro Carrasco Elizalde

    2008-01-01

    Full Text Available The collective behaviour of swarms produces smarter actions than those achieved by a single individual. Colonies of ants, flocks of birds and fish schools are examples of swarms interacting with their environment to achieve a common goal. This cooperative biological intelligence is the inspiration for an adaptive fuzzy controller developed in this paper. Swarm intelligence is used to adjust the parameters of the membership functions used in the adaptive fuzzy controller. The rules of the controller are designed using a computing-with-words approach called Fuzzy-Lyapunov synthesis to improve the stability and robustness of an adaptive fuzzy controller. Computing-with-words provides a powerful tool to manipulate numbers and symbols, like words in a natural language.

  3. Biologically Inspired Self-Stabilizing Control for Bipedal Robots

    Directory of Open Access Journals (Sweden)

    Woosung Yang

    2013-02-01

    Full Text Available Despite recent major advances in computational power and control algorithms, the stable and robust control of a bipedal robot is still a challenging issue due to the complexity and high nonlinearity of robot dynamics. To address the issue an efficient and powerful alternative based on a biologically inspired control framework employing neural oscillators is proposed and tested. In a numerical test the virtual force controller combined with the neural oscillator of a humanoid robot generated rhythmic control signals and stable bipedal locomotion when coupled with proper impedance components. The entrainment nature inherent to neural oscillators also achieved stable and robust walking even in the presence of unexpected disturbances, in that the centre of mass (COM was successfully kept in phase with the zero moment point (ZMP input trajectory. The efficiency of the proposed control scheme is discussed alongside simulation results.

  4. Perception of biological motion in visual agnosia

    OpenAIRE

    Elisabeth eHuberle; Paul eRupek; Markus eLappe; Hans-Otto eKarnath

    2012-01-01

    Over the past twenty-five years, visual processing has been discussed in the context of the dual stream hypothesis consisting of a ventral (‘what') and a dorsal ('where') visual information processing pathway. Patients with brain damage of the ventral pathway typically present with signs of visual agnosia, the inability to identify and discriminate objects by visual exploration, but show normal perception of motion perception. A dissociation between the perception of biological motion and non...

  5. Perception of biological motion in visual agnosia

    Directory of Open Access Journals (Sweden)

    Elisabeth eHuberle

    2012-08-01

    Full Text Available Over the past twenty-five years, visual processing has been discussed in the context of the dual stream hypothesis consisting of a ventral (‘what' and a dorsal ('where' visual information processing pathway. Patients with brain damage of the ventral pathway typically present with signs of visual agnosia, the inability to identify and discriminate objects by visual exploration, but show normal perception of motion perception. A dissociation between the perception of biological motion and non-biological motion has been suggested: Perception of biological motion might be impaired when 'non-biological' motion perception is intact and vice versa. The impact of object recognition on the perception of biological motion remains unclear. We thus investigated this question in a patient with severe visual agnosia, who showed normal perception of non-biological motion. The data suggested that the patient's perception of biological motion remained largely intact. However, when tested with objects constructed of coherently moving dots (‘Shape-from-Motion’, recognition was severely impaired. The results are discussed in the context of possible mechanisms of biological motion perception.

  6. Perception of biological motion in visual agnosia.

    Science.gov (United States)

    Huberle, Elisabeth; Rupek, Paul; Lappe, Markus; Karnath, Hans-Otto

    2012-01-01

    Over the past 25 years, visual processing has been discussed in the context of the dual stream hypothesis consisting of a ventral ("what") and a dorsal ("where") visual information processing pathway. Patients with brain damage of the ventral pathway typically present with signs of visual agnosia, the inability to identify and discriminate objects by visual exploration, but show normal perception of motion perception. A dissociation between the perception of biological motion and non-biological motion has been suggested: perception of biological motion might be impaired when "non-biological" motion perception is intact and vice versa. The impact of object recognition on the perception of biological motion remains unclear. We thus investigated this question in a patient with severe visual agnosia, who showed normal perception of non-biological motion. The data suggested that the patient's perception of biological motion remained largely intact. However, when tested with objects constructed of coherently moving dots ("Shape-from-Motion"), recognition was severely impaired. The results are discussed in the context of possible mechanisms of biological motion perception.

  7. Holarchical Systems and Emotional Holons : Biologically-Inspired System Designs for Control of Autonomous Aerial Vehicles

    Science.gov (United States)

    Ippolito, Corey; Plice, Laura; Pisanich, Greg

    2003-01-01

    The BEES (Bio-inspired Engineering for Exploration Systems) for Mars project at NASA Ames Research Center has the goal of developing bio-inspired flight control strategies to enable aerial explorers for Mars scientific investigations. This paper presents a summary of our ongoing research into biologically inspired system designs for control of unmanned autonomous aerial vehicle communities for Mars exploration. First, we present cooperative design considerations for robotic explorers based on the holarchical nature of biological systems and communities. Second, an outline of an architecture for cognitive decision making and control of individual robotic explorers is presented, modeled after the emotional nervous system of cognitive biological systems. Keywords: Holarchy, Biologically Inspired, Emotional UAV Flight Control

  8. Visualizing ensembles in structural biology.

    Science.gov (United States)

    Melvin, Ryan L; Salsbury, Freddie R

    2016-06-01

    Displaying a single representative conformation of a biopolymer rather than an ensemble of states mistakenly conveys a static nature rather than the actual dynamic personality of biopolymers. However, there are few apparent options due to the fixed nature of print media. Here we suggest a standardized methodology for visually indicating the distribution width, standard deviation and uncertainty of ensembles of states with little loss of the visual simplicity of displaying a single representative conformation. Of particular note is that the visualization method employed clearly distinguishes between isotropic and anisotropic motion of polymer subunits. We also apply this method to ligand binding, suggesting a way to indicate the expected error in many high throughput docking programs when visualizing the structural spread of the output. We provide several examples in the context of nucleic acids and proteins with particular insights gained via this method. Such examples include investigating a therapeutic polymer of FdUMP (5-fluoro-2-deoxyuridine-5-O-monophosphate) - a topoisomerase-1 (Top1), apoptosis-inducing poison - and nucleotide-binding proteins responsible for ATP hydrolysis from Bacillus subtilis. We also discuss how these methods can be extended to any macromolecular data set with an underlying distribution, including experimental data such as NMR structures.

  9. The berkeley wavelet transform: a biologically inspired orthogonal wavelet transform.

    Science.gov (United States)

    Willmore, Ben; Prenger, Ryan J; Wu, Michael C-K; Gallant, Jack L

    2008-06-01

    We describe the Berkeley wavelet transform (BWT), a two-dimensional triadic wavelet transform. The BWT comprises four pairs of mother wavelets at four orientations. Within each pair, one wavelet has odd symmetry, and the other has even symmetry. By translation and scaling of the whole set (plus a single constant term), the wavelets form a complete, orthonormal basis in two dimensions. The BWT shares many characteristics with the receptive fields of neurons in mammalian primary visual cortex (V1). Like these receptive fields, BWT wavelets are localized in space, tuned in spatial frequency and orientation, and form a set that is approximately scale invariant. The wavelets also have spatial frequency and orientation bandwidths that are comparable with biological values. Although the classical Gabor wavelet model is a more accurate description of the receptive fields of individual V1 neurons, the BWT has some interesting advantages. It is a complete, orthonormal basis and is therefore inexpensive to compute, manipulate, and invert. These properties make the BWT useful in situations where computational power or experimental data are limited, such as estimation of the spatiotemporal receptive fields of neurons.

  10. Classification of biological cells using bio-inspired descriptors

    OpenAIRE

    Bel Haj Ali, Wafa; Giampaglia, Dario; Barlaud, Michel; Piro, Paolo; Nock, Richard; Pourcher, Thierry

    2012-01-01

    International audience; This paper proposes a novel automated approach for the categorization of cells in fluorescence microscopy images. Our supervised classification method aims at recognizing patterns of unlabeled cells based on an annotated dataset. First, the cell images need to be indexed by encoding them in a feature space. For this purpose, we propose tailored bio-inspired features relying on the distribution of contrast information. Then, a supervised learning algorithm is proposed f...

  11. DeviceEditor visual biological CAD canvas

    Directory of Open Access Journals (Sweden)

    Chen Joanna

    2012-02-01

    Full Text Available Abstract Background Biological Computer Aided Design (bioCAD assists the de novo design and selection of existing genetic components to achieve a desired biological activity, as part of an integrated design-build-test cycle. To meet the emerging needs of Synthetic Biology, bioCAD tools must address the increasing prevalence of combinatorial library design, design rule specification, and scar-less multi-part DNA assembly. Results We report the development and deployment of web-based bioCAD software, DeviceEditor, which provides a graphical design environment that mimics the intuitive visual whiteboard design process practiced in biological laboratories. The key innovations of DeviceEditor include visual combinatorial library design, direct integration with scar-less multi-part DNA assembly design automation, and a graphical user interface for the creation and modification of design specification rules. We demonstrate how biological designs are rendered on the DeviceEditor canvas, and we present effective visualizations of genetic component ordering and combinatorial variations within complex designs. Conclusions DeviceEditor liberates researchers from DNA base-pair manipulation, and enables users to create successful prototypes using standardized, functional, and visual abstractions. Open and documented software interfaces support further integration of DeviceEditor with other bioCAD tools and software platforms. DeviceEditor saves researcher time and institutional resources through correct-by-construction design, the automation of tedious tasks, design reuse, and the minimization of DNA assembly costs.

  12. Inspiring Integration in College Students Reading Multiple Biology Texts

    Science.gov (United States)

    Firetto, Carla

    2013-01-01

    Introductory biology courses typically present topics on related biological systems across separate chapters and lectures. A complete foundational understanding requires that students understand how these biological systems are related. Unfortunately, spontaneous generation of these connections is rare for novice learners. These experiments focus…

  13. Biology for the Visually Impaired Student.

    Science.gov (United States)

    Cooperman, Susan

    1980-01-01

    This is a description of a beginning college biology course for visually impaired students. Equipment for instruction is discussed and methods for using the materials are included. Topics included in the course are chemical bonding, diffusion and osmosis, cell structure, meiosis and mitosis, reproduction, behavior, nutrition, and circulation. (SA)

  14. Biologically Inspired Target Recognition in Radar Sensor Networks

    Directory of Open Access Journals (Sweden)

    Liang Qilian

    2010-01-01

    Full Text Available One of the great mysteries of the brain is cognitive control. How can the interactions between millions of neurons result in behavior that is coordinated and appears willful and voluntary? There is consensus that it depends on the prefrontal cortex (PFC. Many PFC areas receive converging inputs from at least two sensory modalities. Inspired by human's innate ability to process and integrate information from disparate, network-based sources, we apply human-inspired information integration mechanisms to target detection in cognitive radar sensor network. Humans' information integration mechanisms have been modelled using maximum-likelihood estimation (MLE or soft-max approaches. In this paper, we apply these two algorithms to cognitive radar sensor networks target detection. Discrete-cosine-transform (DCT is used to process the integrated data from MLE or soft-max. We apply fuzzy logic system (FLS to automatic target detection based on the AC power values from DCT. Simulation results show that our MLE-DCT-FLS and soft-max-DCT-FLS approaches perform very well in the radar sensor network target detection, whereas the existing 2D construction algorithm does not work in this study.

  15. Mechanization and Control Concepts for Biologically Inspired Micro Aerial Vehicles

    Science.gov (United States)

    Raney, David L.; Slominski, Eric C.

    2003-01-01

    It is possible that MAV designs of the future will exploit flapping flight in order to perform missions that require extreme agility, such as rapid flight beneath a forest canopy or within the confines of a building. Many of nature's most agile flyers generate flapping motions through resonant excitation of an aeroelastically tailored structure: muscle tissue is used to excite a vibratory mode of their flexible wing structure that creates propulsion and lift. A number of MAV concepts have been proposed that would operate in a similar fashion. This paper describes an ongoing research activity in which mechanization and control concepts with application to resonant flapping MAVs are being explored. Structural approaches, mechanical design, sensing and wingbeat control concepts inspired by hummingbirds, bats and insects are examined. Experimental results from a testbed capable of generating vibratory wingbeat patterns that approximately match those exhibited by hummingbirds in hover, cruise, and reverse flight are presented.

  16. Biologically-Inspired Adaptive Obstacle Negotiation Behavior of Hexapod Robots

    DEFF Research Database (Denmark)

    Goldschmidt, Dennis; Wörgötter, Florentin; Manoonpong, Poramate

    2014-01-01

    Neurobiological studies have shown that insects are able to adapt leg movements and posture for obstacle negotiation in changing environments. Moreover, the distance to an obstacle where an insect begins to climb is found to be a major parameter for successful obstacle negotiation. Inspired...... by these findings, we present an adaptive neural control mechanism for obstacle negotiation behavior in hexapod robots. It combines locomotion control, backbone joint control, local leg reflexes, and neural learning. While the first three components generate locomotion including walking and climbing, the neural...... learning mechanism allows the robot to adapt its behavior for obstacle negotiation with respect to changing conditions, e.g., variable obstacle heights and different walking gaits. By successfully learning the association of an early, predictive signal (conditioned stimulus, CS) and a late, reflex signal...

  17. Biologically Inspired Model for Inference of 3D Shape from Texture.

    Science.gov (United States)

    Gomez, Olman; Neumann, Heiko

    2016-01-01

    A biologically inspired model architecture for inferring 3D shape from texture is proposed. The model is hierarchically organized into modules roughly corresponding to visual cortical areas in the ventral stream. Initial orientation selective filtering decomposes the input into low-level orientation and spatial frequency representations. Grouping of spatially anisotropic orientation responses builds sketch-like representations of surface shape. Gradients in orientation fields and subsequent integration infers local surface geometry and globally consistent 3D depth. From the distributions in orientation responses summed in frequency, an estimate of the tilt and slant of the local surface can be obtained. The model suggests how 3D shape can be inferred from texture patterns and their image appearance in a hierarchically organized processing cascade along the cortical ventral stream. The proposed model integrates oriented texture gradient information that is encoded in distributed maps of orientation-frequency representations. The texture energy gradient information is defined by changes in the grouped summed normalized orientation-frequency response activity extracted from the textured object image. This activity is integrated by directed fields to generate a 3D shape representation of a complex object with depth ordering proportional to the fields output, with higher activity denoting larger distance in relative depth away from the viewer.

  18. Biologically inspired force enhancement for maritime propulsion and maneuvering

    CERN Document Server

    Weymouth, G D

    2016-01-01

    The move to high performance applications greatly increases the demand to produce large instantaneous fluid forces for high-speed maneuvering and improved power efficiency for sustained propulsion. Animals achieve remarkable feats of maneuvering and efficiency by changing their body shape to generate unsteady fluid forces. Inspired by this, we have studied a range of immersed bodies which drastically change their shape to produce fluid forces. These include relatively simple shape- changes, such as quickly changing the angle of attack of a foil to induce emergency stops and the use of tandem flapping foils to generate three times the average propulsive force of a single flapping foil. They also include more unconventional shape-changes such as high-speed retracting foil sections to power roll and dive maneuvers and the use of soft robotics to rapidly shrink the frontal area of an ellipsoid to power 68% efficient fast-start maneuvers or even completely cancel the drag force with 91% quasi-propulsive efficiency...

  19. Biologically-Inspired Adaptive Obstacle Negotiation Behavior of Hexapod Robots

    Directory of Open Access Journals (Sweden)

    Dennis eGoldschmidt

    2014-01-01

    Full Text Available Neurobiological studies have shown that insects are able to adapt leg movements and posture for obstacle negotiation in changing environments. Moreover, the distance to an obstacle where an insect begins to climb is found to be a major parameter for successful obstacle negotiation. Inspired by these findings, we present an adaptive neural control mechanism for obstacle negotiation behavior in hexapod robots. It combines locomotion control, backbone joint control, local leg reflexes, and neural learning. While the first three components generate locomotion including walking and climbing, the neural learning mechanism allows the robot to adapt its behavior for obstacle negotiation with respect to changing conditions, e.g., variable obstacle heights and different walking gaits. By successfully learning the association of an early, predictive signal (conditioned stimulus, CS and a late, reflex signal (unconditioned stimulus, UCS, both provided by ultrasonic sensors at the front of the robot, the robot can autonomously find an appropriate distance from an obstacle to initiate climbing. The adaptive neural control was developed and tested first on a physical robot simulation, and was then successfully transferred to a real hexapod robot, called AMOS II. The results show that the robot can efficiently negotiate obstacles with a height up to 85% of the robot's leg length in simulation and 75% in a real environment.

  20. Visualizing biological reaction intermediates with DNA curtains

    Science.gov (United States)

    Zhao, Yiling; Jiang, Yanzhou; Qi, Zhi

    2017-04-01

    Single-molecule approaches have tremendous potential analyzing dynamic biological reaction with heterogeneity that cannot be effectively accessed via traditional ensemble-level biochemical approaches. The approach of deoxyribonucleic acid (DNA) curtains developed by Dr Eric Greene and his research team at Columbia University is a high-throughput single-molecule technique that utilizes fluorescent imaging to visualize protein–DNA interactions directly and allows the acquisition of statistically relevant information from hundreds or even thousands of individual reactions. This review aims to summarize the past, present, and future of DNA curtains, with an emphasis on its applications to solve important biological questions.

  1. Advances in isothermal amplification: novel strategies inspired by biological processes.

    Science.gov (United States)

    Li, Jia; Macdonald, Joanne

    2015-02-15

    Nucleic acid amplification is an essential process in biological systems. The in vitro adoption of this process has resulted in powerful techniques that underpin modern molecular biology. The most common tool is polymerase chain reaction (PCR). However, the requirement for a thermal cycler has somewhat limited applications of this classic nucleic acid amplification technique. Isothermal amplification, on the other hand, obviates the use of a thermal cycler because reactions occur at a single temperature. Isothermal amplification methods are diverse, but all have been developed from an understanding of natural nucleic acid amplification processes. Here we review current isothermal amplification methods as classified by their enzymatic mechanisms. We compare their advantages, disadvantages, efficiencies, and applications. Finally, we mention some new developments associated with this technology, and consider future possibilities in molecular engineering and recombinant technologies that may develop from an appreciation of the molecular biology of natural systems.

  2. VISUALIZATION OF BIOLOGICAL TISSUE IMPEDANCE PARAMETERS

    Directory of Open Access Journals (Sweden)

    V. I. Bankov

    2016-01-01

    Full Text Available Objective. Investigation the opportunity for measurement of biological tissue impedance to visualize its parameters.Materials and methods. Studies were undertook on the experimental facility, consists of registrating measuring cell, constructed from flat inductors system, formed in oscillatory circuit, herewith investigated biological tissue is the part of this oscillatory circuit. An excitation of oscillatory circuit fulfilled by means of exciter inductor which forms impulse complex modulated electromagnetic field (ICM EMF. The measurement process and visualizations provided by set of certificated instruments: a digital oscillograph AKTAKOM ADS-2221MV, a digital generator АКТАКОМ AWG-4150 (both with software and a gauge RLC E7-22. Comparative dynamic studies of fixed volume and weight pig’s blood, adipose tissue, muscular tissue impedance were conducted by contact versus contactless methods. Contactless method in contrast to contact method gives opportunity to obtain the real morphological visualization of biological tissue irrespective of their nature.Results. Comparison of contact and contactless methods of impedance measurement shows that the inductance to capacitance ratio X(L / X(C was equal: 17 – for muscular tissue, 4 – for blood, 1 – for adipose tissue. It demonstrates the technical correspondence of both impedance registration methods. If propose the base relevance of X (L and X (C parameters for biological tissue impedance so contactless measurement method for sure shows insulating properties of adipose tissue and high conductivity for blood and muscular tissue in fixed volume-weight parameters. Registration of biological tissue impedance complex parameters by contactless method with the help of induced ICM EMF in fixed volume of biological tissue uncovers the most important informative volumes to characterize morphofunctional condition of biological tissue namely X (L / X (C.Conclusion. Contactless method of biological

  3. A design methodology for biologically inspired dry fibrillar adhesives

    Science.gov (United States)

    Aksak, Burak

    Realization of the unique aspects of gecko adhesion and incorporating these aspects into a comprehensive design methodology is essential to enable fabrication of application oriented gecko-inspired dry fibrillar adhesives. To address the need for such a design methodology, we propose a fibrillar adhesion model that evaluates the effect of fiber dimensions and material on adhesive performance of fiber arrays. A fibrillar adhesion model is developed to predict the adhesive characteristics of an array of fibrillar structures, and quantify the effect of fiber length, radius, spacing, and material. Photolithography techniques were utilized to fabricate elastomer microfiber arrays. Fibers that are fabricated from stiff SU-8 photoresist are used to fabricate a flexible negative mold that facilitates fabrication of fiber arrays from various elastomers with high yield. The tips of the cylindrical fibers are modified to mushroom-like tip shapes. Adhesive strengths in excess of 100 kPa is obtained with mushroom tipped elastomer microfibers. Vertically aligned carbon nanofibers (VACNFs) are utilized as enhanced friction materials by partially embedding inside soft polyurethanes. Friction coefficients up to 1 were repeatedly obtained from the resulting VACNF composite structures. A novel fabrication method is used to attach Poly(n-butyl acrylate) (PBA) molecular brush-like structures on the surface of polydimethylsiloxane (PDMS). These brushes are grown on unstructured PDMS and PDMS fibers with mushroom tips. Pull-off force is enhanced by up to 7 times with PBA brush grafted micro-fiber arrays over unstructured PDMS substrate. Adhesion model, initially developed for curved smooth surfaces, is extended to self-affine fractal surfaces to better reflect the adhesion performance of fiber arrays on natural surfaces. Developed adhesion model for fiber arrays is used in an optimization scheme which estimates optimal design parameters to obtain maximum adhesive strength on a given

  4. Proceedings Fourth Workshop on Membrane Computing and Biologically Inspired Process Calculi 2010

    CERN Document Server

    Ciobanu, Gabriel; 10.4204/EPTCS.40

    2010-01-01

    The 4th Workshop on Membrane Computing and Biologically Inspired Process Calculi (MeCBIC 2010) is organized in Jena as a satellite event of the Eleventh International Conference on Membrane Computing (CMC11). Biological membranes play a fundamental role in the complex reactions which take place in cells of living organisms. The importance of this role has been considered in two different types of formalisms introduced recently. Membrane systems were introduced as a class of distributed parallel computing devices inspired by the observation that any biological system is a complex hierarchical structure, with a flow of biochemical substances and information that underlies their functioning. The modeling and analysis of biological systems has also attracted considerable interest of the process algebra research community. Thus the notions of membranes and compartments have been explicitly represented in a family of calculi, such as ambients and brane calculi. A cross fertilization of these two research areas has ...

  5. Dynamical Systems and Control Theory Inspired by Molecular Biology

    Science.gov (United States)

    2011-02-20

    is odd) steady states, there never are more than 2n − 1 steady states, that for parameters near the standard Michaelis - Menten quasi-steady state...conditions, there are at most n + 1 steady states and that for parameters far from the standard Michaelis - Menten quasi-steady state conditions, there is at...moments for certain stochastic kinetics : We have recently started research into stochastic aspects in systems biology. Deterministic mod- els

  6. Biologically Inspired Object Localization for a Modular Mobile Robotic System

    Directory of Open Access Journals (Sweden)

    Zlatogor Minchev

    2005-12-01

    Full Text Available The paper considers a general model of real biological creatures' antennae, which is practically implemented and tested, over a real element of a mobile modular robotic system - the robot MR1. The last could be utilized in solving of the most classical problem in Robotics - Object Localization. The functionality of the represented sensor system is described in a new and original manner by utilizing the tool of Generalized Nets - a new likelihood for description, modelling and simulation of different objects from the Artificial Intelligence area including Robotics.

  7. Algebra of the Visual: The London Underground Map and the Art It Has Inspired

    Directory of Open Access Journals (Sweden)

    Alan Ashton-Smith

    2011-01-01

    Full Text Available "Algebra of the Visual: The London Underground Map and the Art It Has Inspired" by Alan Ashton-Smith. The London Underground symbolizes London, and the London Underground map, designed by Harry Beck in 1931, symbolizes the London Underground. Accordingly, Beck’s map has in itself come to be a recognizable signifier of London. Its impact resonates beyond this city though: it is also the prototype for metro maps worldwide, with its basic topological structure having been adopted for use on the subways of many other cities. (NANO: New American Notes Online

  8. Invariant visual object recognition: biologically plausible approaches.

    Science.gov (United States)

    Robinson, Leigh; Rolls, Edmund T

    2015-10-01

    Key properties of inferior temporal cortex neurons are described, and then, the biological plausibility of two leading approaches to invariant visual object recognition in the ventral visual system is assessed to investigate whether they account for these properties. Experiment 1 shows that VisNet performs object classification with random exemplars comparably to HMAX, except that the final layer C neurons of HMAX have a very non-sparse representation (unlike that in the brain) that provides little information in the single-neuron responses about the object class. Experiment 2 shows that VisNet forms invariant representations when trained with different views of each object, whereas HMAX performs poorly when assessed with a biologically plausible pattern association network, as HMAX has no mechanism to learn view invariance. Experiment 3 shows that VisNet neurons do not respond to scrambled images of faces, and thus encode shape information. HMAX neurons responded with similarly high rates to the unscrambled and scrambled faces, indicating that low-level features including texture may be relevant to HMAX performance. Experiment 4 shows that VisNet can learn to recognize objects even when the view provided by the object changes catastrophically as it transforms, whereas HMAX has no learning mechanism in its S-C hierarchy that provides for view-invariant learning. This highlights some requirements for the neurobiological mechanisms of high-level vision, and how some different approaches perform, in order to help understand the fundamental underlying principles of invariant visual object recognition in the ventral visual stream.

  9. Sparse Approximation of Images Inspired from the Functional Architecture of the Primary Visual Areas

    Directory of Open Access Journals (Sweden)

    Laurent Perrinet

    2007-01-01

    Full Text Available Several drawbacks of critically sampled wavelets can be solved by overcomplete multiresolution transforms and sparse approximation algorithms. Facing the difficulty to optimize such nonorthogonal and nonlinear transforms, we implement a sparse approximation scheme inspired from the functional architecture of the primary visual cortex. The scheme models simple and complex cell receptive fields through log-Gabor wavelets. The model also incorporates inhibition and facilitation interactions between neighboring cells. Functionally these interactions allow to extract edges and ridges, providing an edge-based approximation of the visual information. The edge coefficients are shown sufficient for closely reconstructing the images, while contour representations by means of chains of edges reduce the information redundancy for approaching image compression. Additionally, the ability to segregate the edges from the noise is employed for image restoration.

  10. A Biologically Inspired Cooperative Multi-Robot Control Architecture

    Science.gov (United States)

    Howsman, Tom; Craft, Mike; ONeil, Daniel; Howell, Joe T. (Technical Monitor)

    2002-01-01

    A prototype cooperative multi-robot control architecture suitable for the eventual construction of large space structures has been developed. In nature, there are numerous examples of complex architectures constructed by relatively simple insects, such as termites and wasps, which cooperatively assemble their nests. The prototype control architecture emulates this biological model. Actions of each of the autonomous robotic construction agents are only indirectly coordinated, thus mimicking the distributed construction processes of various social insects. The robotic construction agents perform their primary duties stigmergically i.e., without direct inter-agent communication and without a preprogrammed global blueprint of the final design. Communication and coordination between individual agents occurs indirectly through the sensed modifications that each agent makes to the structure. The global stigmergic building algorithm prototyped during the initial research assumes that the robotic builders only perceive the current state of the structure under construction. Simulation studies have established that an idealized form of the proposed architecture was indeed capable of producing representative large space structures with autonomous robots. This paper will explore the construction simulations in order to illustrate the multi-robot control architecture.

  11. Chemical biology--identification of small molecule modulators of cellular activity by natural product inspired synthesis.

    Science.gov (United States)

    Hübel, Katja; Lessmann, Torben; Waldmann, Herbert

    2008-07-01

    The aim of this tutorial review is to introduce the reader to the concept, synthesis and application of natural product-inspired compound collections as an important field in chemical biology. This review will discuss how potentially interesting scaffolds can be identified (structural classification of natural products), synthesized in an appropriate manner (including stereoselective transformations for solid phase-bound compounds) and tested in biological assays (cell-based screening as well as biochemical in vitro assays). These approaches will provide the opportunity to identify new and interesting compounds as well as new targets for chemical biology and medicinal chemistry research.

  12. From Here to Autonomicity: Self-Managing Agents and the Biological Metaphors that Inspire Them

    Science.gov (United States)

    Sterritt, Roy; Hinchey, Mike

    2005-01-01

    We seek inspiration for self-managing systems from (obviously, pre-existing) biological mechanisms. Autonomic Computing (AC), a self-managing systems initiative based on the biological metaphor of the autonomic nervous system, is increasingly gaining momentum as the way forward for integrating and designing reliable systems, while agent technologies have been identified as a key enabler for engineering autonomicity in systems. This paper looks at other biological metaphors such as reflex and healing, heart- beat monitors, pulse monitors and apoptosis for assisting in the realization of autonomicity.

  13. Integration of bio-inspired, control-based visual and olfactory data for the detection of an elusive target

    Science.gov (United States)

    Duong, Tuan A.; Duong, Nghi; Le, Duong

    2017-01-01

    In this paper, we present an integration technique using a bio-inspired, control-based visual and olfactory receptor system to search for elusive targets in practical environments where the targets cannot be seen obviously by either sensory data. Bio-inspired Visual System is based on a modeling of extended visual pathway which consists of saccadic eye movements and visual pathway (vertebrate retina, lateral geniculate nucleus and visual cortex) to enable powerful target detections of noisy, partial, incomplete visual data. Olfactory receptor algorithm, namely spatial invariant independent component analysis, that was developed based on data of old factory receptor-electronic nose (enose) of Caltech, is adopted to enable the odorant target detection in an unknown environment. The integration of two systems is a vital approach and sets up a cornerstone for effective and low-cost of miniaturized UAVs or fly robots for future DOD and NASA missions, as well as for security systems in Internet of Things environments.

  14. Basic science through engineering? Synthetic modeling and the idea of biology-inspired engineering.

    Science.gov (United States)

    Knuuttila, Tarja; Loettgers, Andrea

    2013-06-01

    Synthetic biology is often understood in terms of the pursuit for well-characterized biological parts to create synthetic wholes. Accordingly, it has typically been conceived of as an engineering dominated and application oriented field. We argue that the relationship of synthetic biology to engineering is far more nuanced than that and involves a sophisticated epistemic dimension, as shown by the recent practice of synthetic modeling. Synthetic models are engineered genetic networks that are implanted in a natural cell environment. Their construction is typically combined with experiments on model organisms as well as mathematical modeling and simulation. What is especially interesting about this combinational modeling practice is that, apart from greater integration between these different epistemic activities, it has also led to the questioning of some central assumptions and notions on which synthetic biology is based. As a result synthetic biology is in the process of becoming more "biology inspired."

  15. Biologically inspired control of humanoid robot arms robust and adaptive approaches

    CERN Document Server

    Spiers, Adam; Herrmann, Guido

    2016-01-01

    This book investigates a biologically inspired method of robot arm control, developed with the objective of synthesising human-like motion dynamically, using nonlinear, robust and adaptive control techniques in practical robot systems. The control method caters to a rising interest in humanoid robots and the need for appropriate control schemes to match these systems. Unlike the classic kinematic schemes used in industrial manipulators, the dynamic approaches proposed here promote human-like motion with better exploitation of the robot’s physical structure. This also benefits human-robot interaction. The control schemes proposed in this book are inspired by a wealth of human-motion literature that indicates the drivers of motion to be dynamic, model-based and optimal. Such considerations lend themselves nicely to achievement via nonlinear control techniques without the necessity for extensive and complex biological models. The operational-space method of robot control forms the basis of many of the techniqu...

  16. Biologically inspired design framework for Robot in Dynamic Environments using Framsticks

    CERN Document Server

    S., Raja Mohamed

    2012-01-01

    Robot design complexity is increasing day by day especially in automated industries. In this paper we propose biologically inspired design framework for robots in dynamic world on the basis of Co-Evolution, Virtual Ecology, Life time learning which are derived from biological creatures. We have created a virtual khepera robot in Framsticks and tested its operational credibility in terms hardware and software components by applying the above suggested techniques. Monitoring complex and non complex behaviors in different environments and obtaining the parameters that influence software and hardware design of the robot that influence anticipated and unanticipated failures, control programs of robot generation are the major concerns of our techniques.

  17. BiLBIQ A Biologically Inspired Robot with Walking and Rolling Locomotion

    CERN Document Server

    King, Ralf Simon

    2013-01-01

    The book ‘BiLBIQ: A biologically inspired Robot with walking and rolling locomotion’ deals with implementing a locomotion behavior observed in the biological archetype Cebrennus villosus to a robot prototype whose structural design needs to be developed.   The biological sample is investigated as far as possible and compared to other evolutional solutions within the framework of nature’s inventions. Current achievements in robotics are examined and evaluated for their relation and relevance to the robot prototype in question. An overview of what is state of the art in actuation ensures the choice of the hardware available and most suitable for this project. Through a constant consideration of the achievement of two fundamentally different ways of locomotion with one and the same structure, a robot design is developed and constructed taking hardware constraints into account. The development of a special leg structure that needs to resemble and replace body elements of the biological archetype is a speci...

  18. Recovery Management in All Optical Networks Using Biologically-Inspired Complex Adaptive System

    Directory of Open Access Journals (Sweden)

    Inadyuti Dutt

    2013-01-01

    Full Text Available All-Optical Networks have the ability to display varied advantages like performance efficiency, throughput etc but their efficiency depends on their survivability as they are attack prone. These attacks can be categorised as active or passive because they try to access information within the network or alter the information in the network. The attack once detected has to be recovered by formulating back-up or alternative paths. The proposed heuristic uses biologically inspired Complex Adaptive System, inspired by Natural Immune System. The study shows that natural immune system exhibit unique behaviour of detecting foreign bodies in our body and removing them on their first occurrences. This phenomenon is being utilised in the proposed heuristic for recovery management in All-optical Network

  19. Real-Time Biologically Inspired Action Recognition from Key Poses Using a Neuromorphic Architecture

    Science.gov (United States)

    Layher, Georg; Brosch, Tobias; Neumann, Heiko

    2017-01-01

    Intelligent agents, such as robots, have to serve a multitude of autonomous functions. Examples are, e.g., collision avoidance, navigation and route planning, active sensing of its environment, or the interaction and non-verbal communication with people in the extended reach space. Here, we focus on the recognition of the action of a human agent based on a biologically inspired visual architecture of analyzing articulated movements. The proposed processing architecture builds upon coarsely segregated streams of sensory processing along different pathways which separately process form and motion information (Layher et al., 2014). Action recognition is performed in an event-based scheme by identifying representations of characteristic pose configurations (key poses) in an image sequence. In line with perceptual studies, key poses are selected unsupervised utilizing a feature-driven criterion which combines extrema in the motion energy with the horizontal and the vertical extendedness of a body shape. Per class representations of key pose frames are learned using a deep convolutional neural network consisting of 15 convolutional layers. The network is trained using the energy-efficient deep neuromorphic networks (Eedn) framework (Esser et al., 2016), which realizes the mapping of the trained synaptic weights onto the IBM Neurosynaptic System platform (Merolla et al., 2014). After the mapping, the trained network achieves real-time capabilities for processing input streams and classify input images at about 1,000 frames per second while the computational stages only consume about 70 mW of energy (without spike transduction). Particularly regarding mobile robotic systems, a low energy profile might be crucial in a variety of application scenarios. Cross-validation results are reported for two different datasets and compared to state-of-the-art action recognition approaches. The results demonstrate, that (I) the presented approach is on par with other key pose based

  20. Recent Developments in the Application of Biologically Inspired Computation to Chemical Sensing

    Science.gov (United States)

    Marco, S.; Gutierrez-Gálvez, A.

    2009-05-01

    Biological olfaction outperforms chemical instrumentation in specificity, response time, detection limit, coding capacity, time stability, robustness, size, power consumption, and portability. This biological function provides outstanding performance due, to a large extent, to the unique architecture of the olfactory pathway, which combines a high degree of redundancy, an efficient combinatorial coding along with unmatched chemical information processing mechanisms. The last decade has witnessed important advances in the understanding of the computational primitives underlying the functioning of the olfactory system. In this work, the state of the art concerning biologically inspired computation for chemical sensing will be reviewed. Instead of reviewing the whole body of computational neuroscience of olfaction, we restrict this review to the application of models to the processing of real chemical sensor data.

  1. Biologically-inspired On-chip Learning in Pulsed Neural Networks

    DEFF Research Database (Denmark)

    Lehmann, Torsten; Woodburn, Robin

    1999-01-01

    Self-learning chips to implement many popular ANN (artificial neural network) algorithms are very difficult to design. We explain why this is so and say what lessons previous work teaches us in the design of self-learning systems. We offer a contribution to the "biologically-inspired" approach......, explaining what we mean by this term and providing an example of a robust, self-learning design that can solve simple classical-conditioning tasks, We give details of the design of individual circuits to perform component functions, which can then be combined into a network to solve the task. We argue...

  2. Soft Robotics: Biological Inspiration, State of the Art, and Future Research

    Directory of Open Access Journals (Sweden)

    Deepak Trivedi

    2008-01-01

    Full Text Available Traditional robots have rigid underlying structures that limit their ability to interact with their environment. For example, conventional robot manipulators have rigid links and can manipulate objects using only their specialised end effectors. These robots often encounter difficulties operating in unstructured and highly congested environments. A variety of animals and plants exhibit complex movement with soft structures devoid of rigid components. Muscular hydrostats (e.g. octopus arms and elephant trunks are almost entirely composed of muscle and connective tissue and plant cells can change shape when pressurised by osmosis. Researchers have been inspired by biology to design and build soft robots. With a soft structure and redundant degrees of freedom, these robots can be used for delicate tasks in cluttered and/or unstructured environments. This paper discusses the novel capabilities of soft robots, describes examples from nature that provide biological inspiration, surveys the state of the art and outlines existing challenges in soft robot design, modelling, fabrication and control.

  3. Adaptation of sensor morphology: an integrative view of perception from biologically inspired robotics perspective.

    Science.gov (United States)

    Iida, Fumiya; Nurzaman, Surya G

    2016-08-01

    Sensor morphology, the morphology of a sensing mechanism which plays a role of shaping the desired response from physical stimuli from surroundings to generate signals usable as sensory information, is one of the key common aspects of sensing processes. This paper presents a structured review of researches on bioinspired sensor morphology implemented in robotic systems, and discusses the fundamental design principles. Based on literature review, we propose two key arguments: first, owing to its synthetic nature, biologically inspired robotics approach is a unique and powerful methodology to understand the role of sensor morphology and how it can evolve and adapt to its task and environment. Second, a consideration of an integrative view of perception by looking into multidisciplinary and overarching mechanisms of sensor morphology adaptation across biology and engineering enables us to extract relevant design principles that are important to extend our understanding of the unfinished concepts in sensing and perception.

  4. Occupational therapy intervention to inspire self-efficacy in a patient with spinal ataxia and visual disturbance.

    Science.gov (United States)

    Tohyama, Satsuki; Usuki, Fusako

    2015-02-09

    We report a case of a patient with severe ataxia and visual disturbance due to vitamin E deficiency, whose self-efficacy was inspired by intervention with an appropriate occupational therapy activity. Before the handloom intervention, her severe neurological deficits decreased her activities of daily living (ADL) ability, which made her feel pessimistic and depressed. The use of a handloom, however, inspired her sense of accomplishment because she could perform the weft movement by using her residual physical function, thereby relieving her pessimistic attitude. This perception of capability motivated her to participate in further rehabilitation. Finally, her eager practice enhanced her ADL ability and quality of life (QOL). The result suggests that it is important to provide an appropriate occupational therapy activity that can inspire self-efficacy in patients with chronic refractory neurological disorders because the perception of capability can enhance the motivation to improve performance in general activities, ADL ability and QOL.

  5. [Total synthesis of biologically active alkaloids using bio-inspired indole oxidation].

    Science.gov (United States)

    Ishikawa, Hayato

    2015-01-01

    Many tryptophan-based dimeric diketopiperazine (DKP) alkaloids including WIN 64821 and ditryptophenaline, which exhibit fascinating biological activities, have been isolated from fungi. These alkaloids possess a unique architecture; therefore several total syntheses of these compounds have been accomplished via bio-inspired reactions. Despite these elegant strategies, we were convinced that a more direct bio-inspired solution for the preparation of tryptophan-based DKP alkaloids was possible because in a true biosynthesis, direct dimerization of tryptophan occurs in aqueous media without incorporation of a protecting group on the substrates. Thus we developed direct bio-inspired dimerization reactions in aqueous, acidic media, along with a novel biomimetic pathway, to provide C2-symmetric and non-symmetric dimeric compounds from commercially available amine-free tryptophan derivatives using Mn(OAc)3, VOF3, and V2O5 as one-electron oxidants. In addition, concise two-pot or three-step syntheses of the naturally occurring dimeric DKP alkaloids (+)-WIN 64821, (-)-ditryptophenaline, and (+)-naseseazine B were accomplished with total yields of 20%, 13%, and 20%, respectively. The present synthesis has several noteworthy features: 1) the tryptophan-based C2-symmetric and non-symmetric dimeric key intermediates can be prepared on a multigram scale in one step; 2) the developed oxidation reaction was carried out in aqueous, acidic solution without deactivation of the metal oxidants; 3) protection of the primary amine can be avoided by salt formation in aqueous acid; 4) for the total two-pot operation, the reaction media are environmentally friendly water and ethanol; 5) satisfactory total yields are obtained compared with previously reported syntheses.

  6. Thermo-fluidic devices and materials inspired from mass and energy transport phenomena in biological system

    Institute of Scientific and Technical Information of China (English)

    Jian XIAO; Jing LIU

    2009-01-01

    Mass and energy transport consists of one of the most significant physiological processes in nature, which guarantees many amazing biological phenomena and activ-ities. Borrowing such idea, many state-of-the-art thermo-fluidic devices and materials such as artificial kidneys, carrier erythrocyte, blood substitutes and so on have been successfully invented. Besides, new emerging technologies are still being developed. This paper is dedicated to present-ing a relatively complete review of the typical devices and materials in clinical use inspired by biological mass and energy transport mechanisms. Particularly, these artificial thermo-fluidic devices and materials will be categorized into organ transplantation, drug delivery, nutrient transport, micro operation, and power supply. Potential approaches for innovating conventional technologies were discussed, corresponding biological phenomena and physical mechan-isms were interpreted, future promising mass-and-energy-transport-based bionic devices were suggested, and prospects along this direction were pointed out. It is expected that many artificial devices based on biological mass and energy transport principle will appear to better improve vari-ous fields related to human life in the near future.

  7. Biologically inspired large scale chemical sensor arrays and embedded data processing

    Science.gov (United States)

    Marco, S.; Gutiérrez-Gálvez, A.; Lansner, A.; Martinez, D.; Rospars, J. P.; Beccherelli, R.; Perera, A.; Pearce, T.; Vershure, P.; Persaud, K.

    2013-05-01

    Biological olfaction outperforms chemical instrumentation in specificity, response time, detection limit, coding capacity, time stability, robustness, size, power consumption, and portability. This biological function provides outstanding performance due, to a large extent, to the unique architecture of the olfactory pathway, which combines a high degree of redundancy, an efficient combinatorial coding along with unmatched chemical information processing mechanisms. The last decade has witnessed important advances in the understanding of the computational primitives underlying the functioning of the olfactory system. EU Funded Project NEUROCHEM (Bio-ICT-FET- 216916) has developed novel computing paradigms and biologically motivated artefacts for chemical sensing taking inspiration from the biological olfactory pathway. To demonstrate this approach, a biomimetic demonstrator has been built featuring a large scale sensor array (65K elements) in conducting polymer technology mimicking the olfactory receptor neuron layer, and abstracted biomimetic algorithms have been implemented in an embedded system that interfaces the chemical sensors. The embedded system integrates computational models of the main anatomic building blocks in the olfactory pathway: the olfactory bulb, and olfactory cortex in vertebrates (alternatively, antennal lobe and mushroom bodies in the insect). For implementation in the embedded processor an abstraction phase has been carried out in which their processing capabilities are captured by algorithmic solutions. Finally, the algorithmic models are tested with an odour robot with navigation capabilities in mixed chemical plumes

  8. Teaching Biology to the Visually Impaired: Accommodating Students' Special Needs.

    Science.gov (United States)

    Womble, Mark D.; Walker, Gary R.

    2001-01-01

    Describes how to teach a visually-oriented biology lecture and laboratory course to blind students. Using several techniques in the laboratory enabled a student to have a meaningful laboratory experience. (SAH)

  9. Maneuvering control and configuration adaptation of a biologically inspired morphing aircraft

    Science.gov (United States)

    Abdulrahim, Mujahid

    Natural flight as a source of inspiration for aircraft design was prominent with early aircraft but became marginalized as aircraft became larger and faster. With recent interest in small unmanned air vehicles, biological inspiration is a possible technology to enhance mission performance of aircraft that are dimensionally similar to gliding birds. Serial wing joints, loosely modeling the avian skeletal structure, are used in the current study to allow significant reconfiguration of the wing shape. The wings are reconfigured to optimize aerodynamic performance and maneuvering metrics related to specific mission tasks. Wing shapes for each mission are determined and related to the seagulls, falcons, albatrosses, and non-migratory African swallows on which the aircraft are based. Variable wing geometry changes the vehicle dynamics, affording versatility in flight behavior but also requiring appropriate compensation to maintain stability and controllability. Time-varying compensation is in the form of a baseline controller which adapts to both the variable vehicle dynamics and to the changing mission requirements. Wing shape is adapted in flight to minimize a cost function which represents energy, temporal, and spatial efficiency. An optimal control architecture unifies the control and adaptation tasks.

  10. A biologically inspired meta-control navigation system for the Psikharpax rat robot.

    Science.gov (United States)

    Caluwaerts, K; Staffa, M; N'Guyen, S; Grand, C; Dollé, L; Favre-Félix, A; Girard, B; Khamassi, M

    2012-06-01

    A biologically inspired navigation system for the mobile rat-like robot named Psikharpax is presented, allowing for self-localization and autonomous navigation in an initially unknown environment. The ability of parts of the model (e.g. the strategy selection mechanism) to reproduce rat behavioral data in various maze tasks has been validated before in simulations. But the capacity of the model to work on a real robot platform had not been tested. This paper presents our work on the implementation on the Psikharpax robot of two independent navigation strategies (a place-based planning strategy and a cue-guided taxon strategy) and a strategy selection meta-controller. We show how our robot can memorize which was the optimal strategy in each situation, by means of a reinforcement learning algorithm. Moreover, a context detector enables the controller to quickly adapt to changes in the environment-recognized as new contexts-and to restore previously acquired strategy preferences when a previously experienced context is recognized. This produces adaptivity closer to rat behavioral performance and constitutes a computational proposition of the role of the rat prefrontal cortex in strategy shifting. Moreover, such a brain-inspired meta-controller may provide an advancement for learning architectures in robotics.

  11. Actions, Observations, and Decision-Making: Biologically Inspired Strategies for Autonomous Aerial Vehicles

    Science.gov (United States)

    Pisanich, Greg; Ippolito, Corey; Plice, Laura; Young, Larry A.; Lau, Benton

    2003-01-01

    This paper details the development and demonstration of an autonomous aerial vehicle embodying search and find mission planning and execution srrategies inspired by foraging behaviors found in biology. It begins by describing key characteristics required by an aeria! explorer to support science and planetary exploration goals, and illustrates these through a hypothetical mission profile. It next outlines a conceptual bio- inspired search and find autonomy architecture that implements observations, decisions, and actions through an "ecology" of producer, consumer, and decomposer agents. Moving from concepts to development activities, it then presents the results of mission representative UAV aerial surveys at a Mars analog site. It next describes hardware and software enhancements made to a commercial small fixed-wing UAV system, which inc!nde a ncw dpvelopnent architecture that also provides hardware in the loop simulation capability. After presenting the results of simulated and actual flights of bioinspired flight algorithms, it concludes with a discussion of future development to include an expansion of system capabilities and field science support.

  12. Survey of locomotion control of legged robots inspired by biological concept

    Institute of Scientific and Technical Information of China (English)

    WU QiDi; LIU ChengJu; ZHANG JiaQi; CHEN QiJun

    2009-01-01

    Compared with wheeled mobile robots, legged robots can easily step over obstacles and walk through rugged ground. They have more flexible bodies and therefore, can deal with complex environment. Nev-ertheless, some other issues make the locomotion control of legged robots a much complicated task, such as the redundant degree of freedoms and balance keeping. From literatures, locomotion control has been solved mainly based on programming mechanism. To use this method, walking trajectories for each leg and the gaits have to be designed, and the adaptability to an unknown environment cannot be guaranteed. From another aspect, studying and simulating animals' walking mechanism for engi-neering application is an efficient way to break the bottleneck of locomotion control for legged robots. This has attracted more and more attentions. Inspired by central pattern generator (CPG), a control method has been proved to be a successful attempt within this scope. In this paper, we will review the biological mechanism, the existence evidences, and the network properties of CPG. From the en-gineering perspective, we will introduce the engineering simulation of CPG, the property analysis, and the research progress of CPG inspired control method in locomotion control of legged robots. Then, in our research, we will further discuss on existing problems, hot issues, and future research directions in this field.

  13. Soft robotic arm inspired by the octopus: I. From biological functions to artificial requirements.

    Science.gov (United States)

    Margheri, L; Laschi, C; Mazzolai, B

    2012-06-01

    Octopuses are molluscs that belong to the group Cephalopoda. They lack joints and rigid links, and as a result, their arms possess virtually limitless freedom of movement. These flexible appendages exhibit peculiar biomechanical features such as stiffness control, compliance, and high flexibility and dexterity. Studying the capabilities of the octopus arm is a complex task that presents a challenge for both biologists and roboticists, the latter of whom draw inspiration from the octopus in designing novel technologies within soft robotics. With this idea in mind, in this study, we used new, purposively developed methods of analysing the octopus arm in vivo to create new biologically inspired design concepts. Our measurements showed that the octopus arm can elongate by 70% in tandem with a 23% diameter reduction and exhibits an average pulling force of 40 N. The arm also exhibited a 20% mean shortening at a rate of 17.1 mm s(-1) and a longitudinal stiffening rate as high as 2 N (mm s)(-1). Using histology and ultrasounds, we investigated the functional morphology of the internal tissues, including the sinusoidal arrangement of the nerve cord and the local insertion points of the longitudinal and transverse muscle fibres. The resulting information was used to create novel design principles and specifications that can in turn be used in developing a new soft robotic arm.

  14. A new landing impact attenuation seat in manned spacecraft biologically-inspired by felids

    Directory of Open Access Journals (Sweden)

    Yu Hui

    2015-04-01

    Full Text Available When manned spacecraft comes back to the earth, it relies on the impact attenuation seat to protect astronauts from injuries during landing phase. Hence, the seat needs to transfer impact load, as small as possible, to the crew. However, there is little room left for traditional seat to improve further. Herein, a new seat system biologically-inspired by felids’ landing is proposed. Firstly, a series of experiments was carried out on cats and tigers, in which they were trained to jump down voluntarily from different heights. Based on the ground reaction forces combined with kinematics, the experiment indicated that felids’ landing after self-initial jump was a multi-step impact attenuation process and the new seat was inspired by this. Then the construction and work process of new seat were redesigned to realize the multi-step impact attenuation. The dynamic response of traditional and new seat is analyzed under the identical conditions and the results show that the new concept seat can significantly weaken the occupant overload in two directions compared with that of traditional seat. As a consequence, the risk of injury evaluated for spinal and head is also lowered, meaning a higher level of protection which is especially beneficial to the debilitated astronaut.

  15. Pose-Independent Face Recognition Using Biologically Inspired Feature Set and Mixture of Experts

    Directory of Open Access Journals (Sweden)

    Reza Azad

    2014-08-01

    Full Text Available Automatic face recognition system has received significant attention during the last decades due to its wide range of applications, such as security, human-computer interaction, visual surveillance, and so on. In this paper, a new and efficient face recognition method, based on features inspired by the human’s visual cortex and applying mixture of experts’ architecture on the extracted feature set is proposed. A feature set is extracted by means of a feed-forward model, which contains a view and illumination invariant C2 features from all images in the data set. Then, these C2 feature vector which derived from a cortex-like mechanism passed to a mixture of multilayer perceptron neural networks. In the result part, the proposed approach is applied on ORL and Yale databases and the accuracy rate achieved 99.75% and 100% respectively. In addition, experimental results have demonstrated our method robust in successful recognition of human faces even with variant lighting and poses.

  16. Mechanism Interpretation of the Biological Brain Cooling and Its Inspiration on Bionic Engineering

    Institute of Scientific and Technical Information of China (English)

    Xu Xue; Jing Liu

    2011-01-01

    The brain is one of the most important organs in a biological body which can only work in a relatively stable temperature range. However, many environmental factors in biosphere would cause cerebral temperature fluctuations. To sustain and regulate the brain temperature, many mechanisms of biological brain cooling have been evolved, including Selective Brain Cooling (SBC), cooling through surface water evaporation, respiration, behavior response and using special anatomical appendages. This article is dedicated to present a summarization and systematic interpretation on brain cooling strategies developed in animals by classifying and comparatively analyzing each typical biological brain cooling mechanism from the perspective of bio-heat transfer. Meanwhile, inspirations from such cooling in nature were proposed for developing advanced bionic engineering technologies especially with two focuses on therapeutic hypothermia and computer chip cooling areas. It is expected that many innovations can be achieved along this way to find out new cooling methodologies for a wide variety of industrial applications which will be highly efficient, energy saving, flexible or even intelligent.

  17. An insect-inspired model for visual binding I: learning objects and their characteristics.

    Science.gov (United States)

    Northcutt, Brandon D; Dyhr, Jonathan P; Higgins, Charles M

    2017-04-01

    Visual binding is the process of associating the responses of visual interneurons in different visual submodalities all of which are responding to the same object in the visual field. Recently identified neuropils in the insect brain termed optic glomeruli reside just downstream of the optic lobes and have an internal organization that could support visual binding. Working from anatomical similarities between optic and olfactory glomeruli, we have developed a model of visual binding based on common temporal fluctuations among signals of independent visual submodalities. Here we describe and demonstrate a neural network model capable both of refining selectivity of visual information in a given visual submodality, and of associating visual signals produced by different objects in the visual field by developing inhibitory neural synaptic weights representing the visual scene. We also show that this model is consistent with initial physiological data from optic glomeruli. Further, we discuss how this neural network model may be implemented in optic glomeruli at a neuronal level.

  18. Real-Time Illumination Invariant Face Detection Using Biologically Inspired Feature Set and BP Neural Network

    Directory of Open Access Journals (Sweden)

    Reza Azad

    2014-06-01

    Full Text Available In recent years, face detection has been thoroughly studied due to its wide potential applications, including face recognition, human-computer interaction, video surveillance, etc.In this paper, a new and illumination invariant face detection method, based on features inspired by the human's visual cortexand applying BP neural network on the extracted featureset is proposed.A feature set is extracted from face and non-face images, by means of a feed-forward model, which contains a view and illumination invariant C2 features from all images in the dataset. Then, these C2 feature vector which derived from a cortex-like mechanism passed to a BP neural network. In the result part, the proposed approach is applied on FEI and Wild face detection databases and high accuracy rate is achieved. In addition, experimental results have demonstrated our proposed face detector outperforms the most of the successful face detection algorithms in the literature and gives the first best result on all tested challenging face detection databases.

  19. A biologically inspired neural network model to transformation invariant object recognition

    Science.gov (United States)

    Iftekharuddin, Khan M.; Li, Yaqin; Siddiqui, Faraz

    2007-09-01

    Transformation invariant image recognition has been an active research area due to its widespread applications in a variety of fields such as military operations, robotics, medical practices, geographic scene analysis, and many others. The primary goal for this research is detection of objects in the presence of image transformations such as changes in resolution, rotation, translation, scale and occlusion. We investigate a biologically-inspired neural network (NN) model for such transformation-invariant object recognition. In a classical training-testing setup for NN, the performance is largely dependent on the range of transformation or orientation involved in training. However, an even more serious dilemma is that there may not be enough training data available for successful learning or even no training data at all. To alleviate this problem, a biologically inspired reinforcement learning (RL) approach is proposed. In this paper, the RL approach is explored for object recognition with different types of transformations such as changes in scale, size, resolution and rotation. The RL is implemented in an adaptive critic design (ACD) framework, which approximates the neuro-dynamic programming of an action network and a critic network, respectively. Two ACD algorithms such as Heuristic Dynamic Programming (HDP) and Dual Heuristic dynamic Programming (DHP) are investigated to obtain transformation invariant object recognition. The two learning algorithms are evaluated statistically using simulated transformations in images as well as with a large-scale UMIST face database with pose variations. In the face database authentication case, the 90° out-of-plane rotation of faces from 20 different subjects in the UMIST database is used. Our simulations show promising results for both designs for transformation-invariant object recognition and authentication of faces. Comparing the two algorithms, DHP outperforms HDP in learning capability, as DHP takes fewer steps to

  20. How can selection of biologically inspired features improve the performance of a robust object recognition model?

    Directory of Open Access Journals (Sweden)

    Masoud Ghodrati

    Full Text Available Humans can effectively and swiftly recognize objects in complex natural scenes. This outstanding ability has motivated many computational object recognition models. Most of these models try to emulate the behavior of this remarkable system. The human visual system hierarchically recognizes objects in several processing stages. Along these stages a set of features with increasing complexity is extracted by different parts of visual system. Elementary features like bars and edges are processed in earlier levels of visual pathway and as far as one goes upper in this pathway more complex features will be spotted. It is an important interrogation in the field of visual processing to see which features of an object are selected and represented by the visual cortex. To address this issue, we extended a hierarchical model, which is motivated by biology, for different object recognition tasks. In this model, a set of object parts, named patches, extracted in the intermediate stages. These object parts are used for training procedure in the model and have an important role in object recognition. These patches are selected indiscriminately from different positions of an image and this can lead to the extraction of non-discriminating patches which eventually may reduce the performance. In the proposed model we used an evolutionary algorithm approach to select a set of informative patches. Our reported results indicate that these patches are more informative than usual random patches. We demonstrate the strength of the proposed model on a range of object recognition tasks. The proposed model outperforms the original model in diverse object recognition tasks. It can be seen from the experiments that selected features are generally particular parts of target images. Our results suggest that selected features which are parts of target objects provide an efficient set for robust object recognition.

  1. How can selection of biologically inspired features improve the performance of a robust object recognition model?

    Science.gov (United States)

    Ghodrati, Masoud; Khaligh-Razavi, Seyed-Mahdi; Ebrahimpour, Reza; Rajaei, Karim; Pooyan, Mohammad

    2012-01-01

    Humans can effectively and swiftly recognize objects in complex natural scenes. This outstanding ability has motivated many computational object recognition models. Most of these models try to emulate the behavior of this remarkable system. The human visual system hierarchically recognizes objects in several processing stages. Along these stages a set of features with increasing complexity is extracted by different parts of visual system. Elementary features like bars and edges are processed in earlier levels of visual pathway and as far as one goes upper in this pathway more complex features will be spotted. It is an important interrogation in the field of visual processing to see which features of an object are selected and represented by the visual cortex. To address this issue, we extended a hierarchical model, which is motivated by biology, for different object recognition tasks. In this model, a set of object parts, named patches, extracted in the intermediate stages. These object parts are used for training procedure in the model and have an important role in object recognition. These patches are selected indiscriminately from different positions of an image and this can lead to the extraction of non-discriminating patches which eventually may reduce the performance. In the proposed model we used an evolutionary algorithm approach to select a set of informative patches. Our reported results indicate that these patches are more informative than usual random patches. We demonstrate the strength of the proposed model on a range of object recognition tasks. The proposed model outperforms the original model in diverse object recognition tasks. It can be seen from the experiments that selected features are generally particular parts of target images. Our results suggest that selected features which are parts of target objects provide an efficient set for robust object recognition.

  2. 16th International Conference on Hybrid Intelligent Systems and the 8th World Congress on Nature and Biologically Inspired Computing

    CERN Document Server

    Haqiq, Abdelkrim; Alimi, Adel; Mezzour, Ghita; Rokbani, Nizar; Muda, Azah

    2017-01-01

    This book presents the latest research in hybrid intelligent systems. It includes 57 carefully selected papers from the 16th International Conference on Hybrid Intelligent Systems (HIS 2016) and the 8th World Congress on Nature and Biologically Inspired Computing (NaBIC 2016), held on November 21–23, 2016 in Marrakech, Morocco. HIS - NaBIC 2016 was jointly organized by the Machine Intelligence Research Labs (MIR Labs), USA; Hassan 1st University, Settat, Morocco and University of Sfax, Tunisia. Hybridization of intelligent systems is a promising research field in modern artificial/computational intelligence and is concerned with the development of the next generation of intelligent systems. The conference’s main aim is to inspire further exploration of the intriguing potential of hybrid intelligent systems and bio-inspired computing. As such, the book is a valuable resource for practicing engineers /scientists and researchers working in the field of computational intelligence and artificial intelligence.

  3. Visualizing time-related data in biology, a review.

    Science.gov (United States)

    Secrier, Maria; Schneider, Reinhard

    2014-09-01

    Time is of the essence in biology as in so much else. For example, monitoring disease progression or the timing of developmental defects is important for the processes of drug discovery and therapy trials. Furthermore, an understanding of the basic dynamics of biological phenomena that are often strictly time regulated (e.g. circadian rhythms) is needed to make accurate inferences about the evolution of biological processes. Recent advances in technologies have enabled us to measure timing effects more accurately and in more detail. This has driven related advances in visualization and analysis tools that try to effectively exploit this data. Beyond timeline plots, notable attempts at more involved temporal interpretation have been made in recent years, but awareness of the available resources is still limited within the scientific community. Here, we review some advances in biological visualization of time-driven processes and consider how they aid data analysis and interpretation.

  4. Task-Oriented Parameter Tuning Based on Priority Condition for Biologically Inspired Robot Application

    Directory of Open Access Journals (Sweden)

    Jaesung Kwon

    2015-01-01

    Full Text Available This work gives a biologically inspired control scheme for controlling a robotic system. Novel adaptive behaviors are observed from humans or animals even in unexpected disturbances or environment changes. This is why they have neural oscillator networks in the spinal cord to yield rhythmic-motor primitives robustly under a changing task. Hence, this work focuses on rhythmic arm movements that can be accomplished in terms of employing a control approach based on an artificial neural oscillator model. The main challenge is to determine various parameters for applying a neural feedback to robotic systems with performing a desired behavior and self-maintaining the entrainment effect. Hence, this work proposes a task-oriented parameter tuning algorithm based on the simulated annealing (SA. This work also illustrates how to technically implement the proposed control scheme exploiting a virtual force and neural feedback. With parameters tuned, it is verified in simulations that a 3-DOF planar robotic arm traces a given trajectory precisely, adapting to uneven external disturbances.

  5. Biologically inspired robotic inspectors: the engineering reality and future outlook (Keynote address)

    Science.gov (United States)

    Bar-Cohen, Yoseph

    2005-04-01

    Human errors have long been recognized as a major factor in the reliability of nondestructive evaluation results. To minimize such errors, there is an increasing reliance on automatic inspection tools that allow faster and consistent tests. Crawlers and various manipulation devices are commonly used to perform variety of inspection procedures that include C-scan with contour following capability to rapidly inspect complex structures. The emergence of robots has been the result of the need to deal with parts that are too complex to handle by a simple automatic system. Economical factors are continuing to hamper the wide use of robotics for inspection applications however technology advances are increasingly changing this paradigm. Autonomous robots, which may look like human, can potentially address the need to inspect structures with configuration that are not predetermined. The operation of such robots that mimic biology may take place at harsh or hazardous environments that are too dangerous for human presence. Biomimetic technologies such as artificial intelligence, artificial muscles, artificial vision and numerous others are increasingly becoming common engineering tools. Inspired by science fiction, making biomimetic robots is increasingly becoming an engineering reality and in this paper the state-of-the-art will be reviewed and the outlook for the future will be discussed.

  6. Design of a biologically inspired lower limb exoskeleton for human gait rehabilitation

    Science.gov (United States)

    Lyu, Mingxing; Chen, Weihai; Ding, Xilun; Wang, Jianhua; Bai, Shaoping; Ren, Huichao

    2016-10-01

    This paper proposes a novel bionic model of the human leg according to the theory of physiology. Based on this model, we present a biologically inspired 3-degree of freedom (DOF) lower limb exoskeleton for human gait rehabilitation, showing that the lower limb exoskeleton is fully compatible with the human knee joint. The exoskeleton has a hybrid serial-parallel kinematic structure consisting of a 1-DOF hip joint module and a 2-DOF knee joint module in the sagittal plane. A planar 2-DOF parallel mechanism is introduced in the design to fully accommodate the motion of the human knee joint, which features not only rotation but also relative sliding. Therefore, the design is consistent with the requirements of bionics. The forward and inverse kinematic analysis is studied and the workspace of the exoskeleton is analyzed. The structural parameters are optimized to obtain a larger workspace. The results using MATLAB-ADAMS co-simulation are shown in this paper to demonstrate the feasibility of our design. A prototype of the exoskeleton is also developed and an experiment performed to verify the kinematic analysis. Compared with existing lower limb exoskeletons, the designed mechanism has a large workspace, while allowing knee joint rotation and small amount of sliding.

  7. Visual Inspirations: The Pedagogical and Cultural Significance of Creative Posters in the Art Classroom

    Science.gov (United States)

    Hasio, Cindy

    2015-01-01

    Creative posters in the classroom can inspire students to become engaged and motivated in learning art. Within the classroom, there are many places to put posters so that students can read them (especially when they get bored in the classroom) - on the cabinets, near the chalkboard, on the teacher's desk and any spare space on the wall. There is…

  8. dNSP: a biologically inspired dynamic Neural network approach to Signal Processing.

    Science.gov (United States)

    Cano-Izquierdo, José Manuel; Ibarrola, Julio; Pinzolas, Miguel; Almonacid, Miguel

    2008-09-01

    The arriving order of data is one of the intrinsic properties of a signal. Therefore, techniques dealing with this temporal relation are required for identification and signal processing tasks. To perform a classification of the signal according with its temporal characteristics, it would be useful to find a feature vector in which the temporal attributes were embedded. The correlation and power density spectrum functions are suitable tools to manage this issue. These functions are usually defined with statistical formulation. On the other hand, in biology there can be found numerous processes in which signals are processed to give a feature vector; for example, the processing of sound by the auditory system. In this work, the dNSP (dynamic Neural Signal Processing) architecture is proposed. This architecture allows representing a time-varying signal by a spatial (thus statical) vector. Inspired by the aforementioned biological processes, the dNSP performs frequency decomposition using an analogical parallel algorithm carried out by simple processing units. The architecture has been developed under the paradigm of a multilayer neural network, where the different layers are composed by units whose activation functions have been extracted from the theory of Neural Dynamic [Grossberg, S. (1988). Nonlinear neural networks principles, mechanisms and architectures. Neural Networks, 1, 17-61]. A theoretical study of the behavior of the dynamic equations of the units and their relationship with some statistical functions allows establishing a parallelism between the unit activations and correlation and power density spectrum functions. To test the capabilities of the proposed approach, several testbeds have been employed, i.e. the frequencial study of mathematical functions. As a possible application of the architecture, a highly interesting problem in the field of automatic control is addressed: the recognition of a controlled DC motor operating state.

  9. Visual Analysis of Biological Activity Data with Scaffold Hunter.

    Science.gov (United States)

    Klein, Karsten; Koch, Oliver; Kriege, Nils; Mutzel, Petra; Schäfer, Till

    2013-12-01

    The growing interest in chemogenomics approaches over the last years has led to an increasing amount of data regarding chemical and the corresponding biological activity space. The resulting data, collected in either in-house or public databases, need to be analyzed efficiently to speed-up the increasingly difficult task of drug discovery. Unfortunately, the discovery of new chemical entities or new targets for known drugs ('drug repurposing') is not suitable to a fully automated analysis or a simple drill down process. Visual interactive interfaces that allow to explore chemical space in a systematic manner and facilitate analytical reasoning can help to overcome these problems. Scaffold Hunter is a tool for the visual analysis of chemical compound databases that provides integrated visualization and analysis of biological activity data and fosters the interactive exploration of data imported from a variety of sources. We describe the features and illustrate the use by means of an exemplary analysis workflow.

  10. Training mechanical engineering students to utilize biological inspiration during product development.

    Science.gov (United States)

    Bruck, Hugh A; Gershon, Alan L; Golden, Ira; Gupta, Satyandra K; Gyger, Lawrence S; Magrab, Edward B; Spranklin, Brent W

    2007-12-01

    The use of bio-inspiration for the development of new products and devices requires new educational tools for students consisting of appropriate design and manufacturing technologies, as well as curriculum. At the University of Maryland, new educational tools have been developed that introduce bio-inspired product realization to undergraduate mechanical engineering students. These tools include the development of a bio-inspired design repository, a concurrent fabrication and assembly manufacturing technology, a series of undergraduate curriculum modules and a new senior elective in the bio-inspired robotics area. This paper first presents an overview of the two new design and manufacturing technologies that enable students to realize bio-inspired products, and describes how these technologies are integrated into the undergraduate educational experience. Then, the undergraduate curriculum modules are presented, which provide students with the fundamental design and manufacturing principles needed to support bio-inspired product and device development. Finally, an elective bio-inspired robotics project course is present, which provides undergraduates with the opportunity to demonstrate the application of the knowledge acquired through the curriculum modules in their senior year using the new design and manufacturing technologies.

  11. Fixed-wing MAV attitude stability in atmospheric turbulence-Part 2: Investigating biologically-inspired sensors

    Science.gov (United States)

    Mohamed, A.; Watkins, S.; Clothier, R.; Abdulrahim, M.; Massey, K.; Sabatini, R.

    2014-11-01

    Challenges associated with flight control of agile fixed-wing Micro Air Vehicles (MAVs) operating in complex environments is significantly different to any larger scale vehicle. The micro-scale of MAVs can make them particularly sensitive to atmospheric disturbances thus limiting their operation. As described in Part 1, current conventional reactive attitude sensing systems lack the necessary response times for attitude control in high turbulence environments. This paper reviews in greater detail novel and emerging biologically inspired sensors, which can sense the disturbances before a perturbation is induced. A number of biological mechanoreceptors used by flying animals are explored for their utility in MAVs. Man-made attempts of replicating mechanoreceptors have thus been reviewed. Bio-inspired flow and pressure-based sensors were found to be the most promising for complementing or replacing current inertial-based reactive attitude sensors. Achieving practical implementations that meet the size, weight and power constraints of MAVs remains a significant challenge. Biological systems were found to rely on multiple sensors, potentially implying a number of research opportunities in the exploration of heterogeneous bio-inspired sensing solutions.

  12. An eQTL biological data visualization challenge and approaches from the visualization community.

    Science.gov (United States)

    Bartlett, Christopher W; Cheong, Soo Yeon; Hou, Liping; Paquette, Jesse; Lum, Pek Yee; Jäger, Günter; Battke, Florian; Vehlow, Corinna; Heinrich, Julian; Nieselt, Kay; Sakai, Ryo; Aerts, Jan; Ray, William C

    2012-01-01

    In 2011, the IEEE VisWeek conferences inaugurated a symposium on Biological Data Visualization. Like other domain-oriented Vis symposia, this symposium's purpose was to explore the unique characteristics and requirements of visualization within the domain, and to enhance both the Visualization and Bio/Life-Sciences communities by pushing Biological data sets and domain understanding into the Visualization community, and well-informed Visualization solutions back to the Biological community. Amongst several other activities, the BioVis symposium created a data analysis and visualization contest. Unlike many contests in other venues, where the purpose is primarily to allow entrants to demonstrate tour-de-force programming skills on sample problems with known solutions, the BioVis contest was intended to whet the participants' appetites for a tremendously challenging biological domain, and simultaneously produce viable tools for a biological grand challenge domain with no extant solutions. For this purpose expression Quantitative Trait Locus (eQTL) data analysis was selected. In the BioVis 2011 contest, we provided contestants with a synthetic eQTL data set containing real biological variation, as well as a spiked-in gene expression interaction network influenced by single nucleotide polymorphism (SNP) DNA variation and a hypothetical disease model. Contestants were asked to elucidate the pattern of SNPs and interactions that predicted an individual's disease state. 9 teams competed in the contest using a mixture of methods, some analytical and others through visual exploratory methods. Independent panels of visualization and biological experts judged entries. Awards were given for each panel's favorite entry, and an overall best entry agreed upon by both panels. Three special mention awards were given for particularly innovative and useful aspects of those entries. And further recognition was given to entries that correctly answered a bonus question about how a

  13. An eQTL biological data visualization challenge and approaches from the visualization community

    Science.gov (United States)

    2012-01-01

    In 2011, the IEEE VisWeek conferences inaugurated a symposium on Biological Data Visualization. Like other domain-oriented Vis symposia, this symposium's purpose was to explore the unique characteristics and requirements of visualization within the domain, and to enhance both the Visualization and Bio/Life-Sciences communities by pushing Biological data sets and domain understanding into the Visualization community, and well-informed Visualization solutions back to the Biological community. Amongst several other activities, the BioVis symposium created a data analysis and visualization contest. Unlike many contests in other venues, where the purpose is primarily to allow entrants to demonstrate tour-de-force programming skills on sample problems with known solutions, the BioVis contest was intended to whet the participants' appetites for a tremendously challenging biological domain, and simultaneously produce viable tools for a biological grand challenge domain with no extant solutions. For this purpose expression Quantitative Trait Locus (eQTL) data analysis was selected. In the BioVis 2011 contest, we provided contestants with a synthetic eQTL data set containing real biological variation, as well as a spiked-in gene expression interaction network influenced by single nucleotide polymorphism (SNP) DNA variation and a hypothetical disease model. Contestants were asked to elucidate the pattern of SNPs and interactions that predicted an individual's disease state. 9 teams competed in the contest using a mixture of methods, some analytical and others through visual exploratory methods. Independent panels of visualization and biological experts judged entries. Awards were given for each panel's favorite entry, and an overall best entry agreed upon by both panels. Three special mention awards were given for particularly innovative and useful aspects of those entries. And further recognition was given to entries that correctly answered a bonus question about how a

  14. Integrating biologically inspired nanomaterials and table-top stereolithography for 3D printed biomimetic osteochondral scaffolds.

    Science.gov (United States)

    Castro, Nathan J; O'Brien, Joseph; Zhang, Lijie Grace

    2015-09-01

    The osteochondral interface of an arthritic joint is notoriously difficult to regenerate due to its extremely poor regenerative capacity and complex stratified architecture. Native osteochondral tissue extracellular matrix is composed of numerous nanoscale organic and inorganic constituents. Although various tissue engineering strategies exist in addressing osteochondral defects, limitations persist with regards to tissue scaffolding which exhibit biomimetic cues at the nano to micro scale. In an effort to address this, the current work focused on 3D printing biomimetic nanocomposite scaffolds for improved osteochondral tissue regeneration. For this purpose, two biologically-inspired nanomaterials have been synthesized consisting of (1) osteoconductive nanocrystalline hydroxyapatite (nHA) (primary inorganic component of bone) and (2) core-shell poly(lactic-co-glycolic) acid (PLGA) nanospheres encapsulated with chondrogenic transforming growth-factor β1 (TGF-β1) for sustained delivery. Then, a novel table-top stereolithography 3D printer and the nano-ink (i.e., nHA + nanosphere + hydrogel) were employed to fabricate a porous and highly interconnected osteochondral scaffold with hierarchical nano-to-micro structure and spatiotemporal bioactive factor gradients. Our results showed that human bone marrow-derived mesenchymal stem cell adhesion, proliferation, and osteochondral differentiation were greatly improved in the biomimetic graded 3D printed osteochondral construct in vitro. The current work served to illustrate the efficacy of the nano-ink and current 3D printing technology for efficient fabrication of a novel nanocomposite hydrogel scaffold. In addition, tissue-specific growth factors illustrated a synergistic effect leading to increased cell adhesion and directed stem cell differentiation.

  15. Integrating biologically inspired nanomaterials and table-top stereolithography for 3D printed biomimetic osteochondral scaffolds

    Science.gov (United States)

    Castro, Nathan J.; O'Brien, Joseph; Zhang, Lijie Grace

    2015-08-01

    The osteochondral interface of an arthritic joint is notoriously difficult to regenerate due to its extremely poor regenerative capacity and complex stratified architecture. Native osteochondral tissue extracellular matrix is composed of numerous nanoscale organic and inorganic constituents. Although various tissue engineering strategies exist in addressing osteochondral defects, limitations persist with regards to tissue scaffolding which exhibit biomimetic cues at the nano to micro scale. In an effort to address this, the current work focused on 3D printing biomimetic nanocomposite scaffolds for improved osteochondral tissue regeneration. For this purpose, two biologically-inspired nanomaterials have been synthesized consisting of (1) osteoconductive nanocrystalline hydroxyapatite (nHA) (primary inorganic component of bone) and (2) core-shell poly(lactic-co-glycolic) acid (PLGA) nanospheres encapsulated with chondrogenic transforming growth-factor β1 (TGF-β1) for sustained delivery. Then, a novel table-top stereolithography 3D printer and the nano-ink (i.e., nHA + nanosphere + hydrogel) were employed to fabricate a porous and highly interconnected osteochondral scaffold with hierarchical nano-to-micro structure and spatiotemporal bioactive factor gradients. Our results showed that human bone marrow-derived mesenchymal stem cell adhesion, proliferation, and osteochondral differentiation were greatly improved in the biomimetic graded 3D printed osteochondral construct in vitro. The current work served to illustrate the efficacy of the nano-ink and current 3D printing technology for efficient fabrication of a novel nanocomposite hydrogel scaffold. In addition, tissue-specific growth factors illustrated a synergistic effect leading to increased cell adhesion and directed stem cell differentiation.

  16. A Reggio-Inspired Music Atelier: Opening the Door between Visual Arts and Music

    Science.gov (United States)

    Hanna, Wendell

    2014-01-01

    The Reggio Emilia approach is based on the idea that every child has at least, "one hundred languages" available for expressing perspectives of the world, and one of those languages is music. While all of the arts (visual, music, dance, drama) are considered equally important in Reggio schools, the visual arts have been particularly…

  17. Biological inspiration in optics and photonics: harnessing nature's light manipulation strategies for multifunctional optical materials (Conference Presentation)

    Science.gov (United States)

    Kolle, Mathias; Sandt, Joseph D.; Nagelberg, Sara N.; Zarzar, Lauren D.; Kreysing, Moritz; Vukusic, Peter

    2016-03-01

    The precise control of light-matter interactions is crucial for the majority of known biological organisms in their struggle to survive. Many species have evolved unique methods to manipulate light in their environment using a variety of physical effects including pigment-induced, spectrally selective absorption or light interference in photonic structures that consist of micro- and nano-periodic material morphologies. In their optical performance, many of the known biological photonic systems are subject to selection criteria not unlike the requirements faced in the development of novel optical technology. For this reason, biological light manipulation strategies provide inspiration for the creation of tunable, stimuli-responsive, adaptive material platforms that will contribute to the development of multifunctional surfaces and innovative optical technology. Biomimetic and bio-inspired approaches for the manufacture of photonic systems rely on self-assembly and bottom-up growth techniques often combined with conventional top-down manufacturing. In this regard, we can benefit in several ways from highly sophisticated material solutions that have convergently evolved in various organisms. We explore design concepts found in biological photonic architectures, seek to understand the mechanisms underlying morphogenesis of bio-optical systems, aim to devise viable manufacturing strategies that can benefit from insight in biological formation processes and the use of established synthetic routines alike, and ultimately strive to realize new photonic materials with tailor-made optical properties. This talk is focused on the identification of biological role model photonic architectures, a brief discussion of recently developed bio-inspired photonic structures, including mechano-sensitive color-tunable photonic fibers and reconfigurable fluid micro-lenses. Potentially, early-stage results in studying and harnessing the structure-forming capabilities of living cells that

  18. Visualization of biological texture using correlation coefficient images.

    Science.gov (United States)

    Sviridov, Alexander P; Ulissi, Zachary; Chernomordik, Victor; Hassan, Moinuddin; Gandjbakhche, Amir H

    2006-01-01

    Subsurface structural features of biological tissue are visualized using polarized light images. The technique of Pearson correlation coefficient analysis is used to reduce blurring of these features by unpolarized backscattered light and to visualize the regions of high statistical similarities within the noisy tissue images. It is shown that under certain conditions, such correlation coefficient maps are determined by the textural character of tissues and not by the chosen region of interest, providing information on tissue structure. As an example, the subsurface texture of a demineralized tooth sample is enhanced from a noisy polarized light image.

  19. Superior visual performance in nocturnal insects: neural principles and bio-inspired technologies

    Science.gov (United States)

    Warrant, Eric J.

    2016-04-01

    At night, our visual capacities are severely reduced, with a complete loss in our ability to see colour and a dramatic loss in our ability to see fine spatial and temporal details. This is not the case for many nocturnal animals, notably insects. Our recent work, particularly on fast-flying moths and bees and on ball-rolling dung beetles, has shown that nocturnal animals are able to distinguish colours, to detect faint movements, to learn visual landmarks, to orient to the faint pattern of polarised light produced by the moon and to navigate using the stars. These impressive visual abilities are the result of exquisitely adapted eyes and visual systems, the product of millions of years of evolution. Nocturnal animals typically have highly sensitive eye designs and visual neural circuitry that is optimised for extracting reliable information from dim and noisy visual images. Even though we are only at the threshold of understanding the neural mechanisms responsible for reliable nocturnal vision, growing evidence suggests that the neural summation of photons in space and time is critically important: even though vision in dim light becomes necessarily coarser and slower, it also becomes significantly more reliable. We explored the benefits of spatiotemporal summation by creating a computer algorithm that mimicked nocturnal visual processing strategies. This algorithm dramatically increased the reliability of video collected in dim light, including the preservation of colour, strengthening evidence that summation strategies are essential for nocturnal vision.

  20. Visual Behaviour Based Bio-Inspired Polarization Techniques in Computer Vision and Robotics

    OpenAIRE

    Shabayek, Abd El Rahman; Morel, Olivier; Fofi, David

    2012-01-01

    For long time, it was thought that the sensing of polarization by animals is invariably related to their behavior, such as navigation and orientation. Recently, it was found that polarization can be part of a high-level visual perception, permitting a wide area of vision applications. Polarization vision can be used for most tasks of color vision including object recognition, contrast enhancement, camouflage breaking, and signal detection and discrimination. The polarization based visual beha...

  1. explorase: Multivariate Exploratory Analysis and Visualization for Systems Biology

    OpenAIRE

    2008-01-01

    The datasets being produced by high-throughput biological experiments, such as microarrays, have forced biologists to turn to sophisticated statistical analysis and visualization tools in order to understand their data. We address the particular need for an open-source exploratory data analysis tool that applies numerical methods in coordination with interactive graphics to the analysis of experimental data. The software package, known as explorase, provides a graphical user interface (GUI) ...

  2. Identifying and visualizing macromolecular flexibility in structural biology

    Directory of Open Access Journals (Sweden)

    Martina Palamini

    2016-09-01

    Full Text Available Structural biology comprises a variety of tools to obtain atomic resolution data for the investigation of macromolecules. Conventional structural methodologies including crystallography, NMR and electron microscopy often do not provide sufficient details concerning flexibility and dynamics, even though these aspects are critical for the physiological functions of the systems under investigation. However, the increasing complexity of the molecules studied by structural biology (including large macromolecular assemblies, integral membrane proteins, intrinsically disordered systems, and folding intermediates continuously demands in-depth analyses of the roles of flexibility and conformational specificity involved in interactions with ligands and inhibitors. The intrinsic difficulties in capturing often subtle but critical molecular motions in biological systems have restrained the investigation of flexible molecules into a small niche of structural biology. Introduction of massive technological developments over the recent years, which include time-resolved studies, solution X-ray scattering, and new detectors for cryo-electron microscopy, have pushed the limits of structural investigation of flexible systems far beyond traditional approaches of NMR analysis. By integrating these modern methods with powerful biophysical and computational approaches such as generation of ensembles of molecular models and selective particle picking in electron microscopy, more feasible investigations of dynamic systems are now possible. Using some prominent examples from recent literature, we review how current structural biology methods can contribute useful data to accurately visualize flexibility in macromolecular structures and understand its important roles in regulation of biological processes.

  3. Biologically Inspired Electronic, Photovoltaic and Microfluidic Devices Based on Aqueous Soft Matter

    Science.gov (United States)

    Koo, Hyung Jun

    Hydrogels are a water-based soft material where three dimensional networks of hydrophilic polymer retain large amounts of water. We developed hydrogel based devices with new functionalities inspired by materials, structures and processes in nature. The advantages, such as softness, biocompatibility and high ionic conductivity, could enable hydrogels to be novel materials for biomimetic devices operated by ionic current. Moreover, microfluidic patterns are easily embedded in moldable hydrogels and allow for unique convective/diffusive transport mechanism in porous gel to be used for uniform delivery of reagent solution. We first developed and characterized a device with unidirectional ionic current flow across a SiO2/Gel junction, which showed highly efficient rectification of the ionic current by non-linear conductivity of SiO2 films. Addition of polyelectrolytes and salt to the gel layer significantly improved the performance of the new diode device because of the enhanced gel conductance. A soft matter based diode composed of hydrogel and liquid metal (eutectic gallium indium, EGaIn) was also presented. The ability to control the thickness, and thus resistivity, of an insulating oxide skin on the metal enables the current rectification. The effect of ionic conductivity and pH on the formation of the insulating oxide was investigated in a simple model system with liquid metal/electrolyte solution or hydrogel/Pt interfaces. Finally, we present a diode composed entirely of soft materials by replacing the platinum electrode with a second liquid metal electrode. A new type of hydrogel-based photovoltaic systems (HGPVs) was constructed. Two photosensitive ionized molecules embedded in aqueous gel served as photoactive species. The HGPVs showed performance comparable with or higher than those of some other biomimetic or ionic photovoltaic systems reported recently. We suggest a provisional mechanism of the device operation, based on a synergetic effect of the two dye

  4. Meaningful auditory information enhances perception of visual biological motion.

    Science.gov (United States)

    Arrighi, Roberto; Marini, Francesco; Burr, David

    2009-04-30

    Robust perception requires efficient integration of information from our various senses. Much recent electrophysiology points to neural areas responsive to multisensory stimulation, particularly audiovisual stimulation. However, psychophysical evidence for functional integration of audiovisual motion has been ambiguous. In this study we measure perception of an audiovisual form of biological motion, tap dancing. The results show that the audio tap information interacts with visual motion information, but only when in synchrony, demonstrating a functional combination of audiovisual information in a natural task. The advantage of multimodal combination was better than the optimal maximum likelihood prediction.

  5. A bio-inspired method and system for visual object-based attention and segmentation

    Science.gov (United States)

    Huber, David J.; Khosla, Deepak

    2010-04-01

    This paper describes a method and system of human-like attention and object segmentation in visual scenes that (1) attends to regions in a scene in their rank of saliency in the image, (2) extracts the boundary of an attended proto-object based on feature contours, and (3) can be biased to boost the attention paid to specific features in a scene, such as those of a desired target object in static and video imagery. The purpose of the system is to identify regions of a scene of potential importance and extract the region data for processing by an object recognition and classification algorithm. The attention process can be performed in a default, bottom-up manner or a directed, top-down manner which will assign a preference to certain features over others. One can apply this system to any static scene, whether that is a still photograph or imagery captured from video. We employ algorithms that are motivated by findings in neuroscience, psychology, and cognitive science to construct a system that is novel in its modular and stepwise approach to the problems of attention and region extraction, its application of a flooding algorithm to break apart an image into smaller proto-objects based on feature density, and its ability to join smaller regions of similar features into larger proto-objects. This approach allows many complicated operations to be carried out by the system in a very short time, approaching real-time. A researcher can use this system as a robust front-end to a larger system that includes object recognition and scene understanding modules; it is engineered to function over a broad range of situations and can be applied to any scene with minimal tuning from the user.

  6. Performance improvement of IPMC flow sensors with a biologically-inspired cupula structure

    Science.gov (United States)

    Lei, Hong; Sharif, Montassar Aidi; Paley, Derek A.; McHenry, Matthew J.; Tan, Xiaobo

    2016-04-01

    Ionic polymer-metal composites (IPMCs) have inherent underwater sensing and actuation properties. They can be used as sensors to collect flow information. Inspired by the hair-cell mediated receptor in the lateral line system of fish, the impact of a flexible, cupula-like structure on the performance of IPMC flow sensors is experimentally explored. The fabrication method to create a silicone-capped IPMC sensor is reported. Experiments are conducted to compare the sensing performance of the IPMC flow sensor before and after the PDMS coating under the periodic flow stimulus generated by a dipole source in still water and the laminar flow stimulus generated in a flow tank. Experimental results show that the performance of IPMC flow sensors is significantly improved under the stimulus of both periodic flow and laminar flow by the proposed silicone-capping.

  7. The DCA:SOMe Comparison A comparative study between two biologically-inspired algorithms

    CERN Document Server

    Greensmith, Julie; Aickelin, Uwe

    2010-01-01

    The Dendritic Cell Algorithm (DCA) is an immune-inspired algorithm, developed for the purpose of anomaly detection. The algorithm performs multi-sensor data fusion and correlation which results in a 'context aware' detection system. Previous applications of the DCA have included the detection of potentially malicious port scanning activity, where it has produced high rates of true positives and low rates of false positives. In this work we aim to compare the performance of the DCA and of a Self-Organizing Map (SOM) when applied to the detection of SYN port scans, through experimental analysis. A SOM is an ideal candidate for comparison as it shares similarities with the DCA in terms of the data fusion method employed. It is shown that the results of the two systems are comparable, and both produce false positives for the same processes. This shows that the DCA can produce anomaly detection results to the same standard as an established technique.

  8. The role of mechanics in biological and bio-inspired systems.

    Science.gov (United States)

    Egan, Paul; Sinko, Robert; LeDuc, Philip R; Keten, Sinan

    2015-07-06

    Natural systems frequently exploit intricate multiscale and multiphasic structures to achieve functionalities beyond those of man-made systems. Although understanding the chemical make-up of these systems is essential, the passive and active mechanics within biological systems are crucial when considering the many natural systems that achieve advanced properties, such as high strength-to-weight ratios and stimuli-responsive adaptability. Discovering how and why biological systems attain these desirable mechanical functionalities often reveals principles that inform new synthetic designs based on biological systems. Such approaches have traditionally found success in medical applications, and are now informing breakthroughs in diverse frontiers of science and engineering.

  9. A complex biological system: the fly's visual module.

    Science.gov (United States)

    Baptista, Murilo S; de Almeida, Lirio O B; Slaets, Jan F W; Köberle, Roland; Grebogi, Celso

    2008-02-13

    Is the characterization of biological systems as complex systems in the mathematical sense a fruitful assertion? In this paper we argue in the affirmative, although obviously we do not attempt to confront all the issues raised by this question. We use the fly's visual system as an example and analyse our experimental results of one particular neuron in the fly's visual system from this point of view. We find that the motion-sensitive 'H1' neuron, which converts incoming signals into a sequence of identical pulses or 'spikes', encodes the information contained in the stimulus into an alphabet composed of a few letters. This encoding occurs on multilayered sets, one of the features attributed to complex systems. The conversion of intervals between consecutive occurrences of spikes into an alphabet requires us to construct a generating partition. This entails a one-to-one correspondence between sequences of spike intervals and words written in the alphabet. The alphabet dynamics is multifractal both with and without stimulus, though the multifractality increases with the stimulus entropy. This is in sharp contrast to models generating independent spike intervals, such as models using Poisson statistics, whose dynamics is monofractal. We embed the support of the probability measure, which describes the distribution of words written in this alphabet, in a two-dimensional space, whose topology can be reproduced by an M-shaped map. This map has positive Lyapunov exponents, indicating a chaotic-like encoding.

  10. explorase: Multivariate Exploratory Analysis and Visualization for Systems Biology

    Directory of Open Access Journals (Sweden)

    Michael Lawrence

    2008-03-01

    Full Text Available The datasets being produced by high-throughput biological experiments, such as microarrays, have forced biologists to turn to sophisticated statistical analysis and visualization tools in order to understand their data. We address the particular need for an open-source exploratory data analysis tool that applies numerical methods in coordination with interactive graphics to the analysis of experimental data. The software package, known as explorase, provides a graphical user interface (GUI on top of the R platform for statistical computing and the GGobi software for multivariate interactive graphics. The GUI is designed for use by biologists, many of whom are unfamiliar with the R language. It displays metadata about experimental design and biological entities in tables that are sortable and filterable. There are menu shortcuts to the analysis methods implemented in R, including graphical interfaces to linear modeling tools. The GUI is linked to data plots in GGobi through a brush tool that simultaneously colors rows in the entity information table and points in the GGobi plots.

  11. Biologically Inspired Circuits for Visual Search and Recognition in Complex Scenes

    Science.gov (United States)

    2013-02-01

    target objects can be physically similar to distractor clutter and because objects can cast an infinite number of projections on the retina, this...established that top-down signals exist essentially at every level in neocortex (e.g. (Douglas and Martin, 2004)). We A. Occlusion suppresses and delays...of occlusion include suppressing the amplitude as well as increasing the latency of the responses (Figure 6A). The top-down signals can play a

  12. Biology-inspired microphysiological system approaches to solve the prediction dilemma of substance testing

    NARCIS (Netherlands)

    Marx, Uwe; Andersson, Tommy B; Bahinski, Anthony; Beilmann, Mario; Beken, Sonja; Cassee, Flemming R; Cirit, Murat; Daneshian, Mardas; Fitzpatrick, Susan; Frey, Olivier; Gaertner, Claudia; Giese, Christoph; Griffith, Linda; Hartung, Thomas; Heringa, Minne B; Hoeng, Julia; de Jong, Wim H; Kojima, Hajime; Kuehnl, Jochen; Leist, Marcel; Luch, Andreas; Maschmeyer, Ilka; Sakharov, Dmitry; Sips, Adrienne J A M; Steger-Hartmann, Thomas; Tagle, Danilo A; Tonevitsky, Alexander; Tralau, Tewes; Tsyb, Sergej; van de Stolpe, Anja; Vandebriel, Rob; Vulto, Paul; Wang, Jufeng; Wiest, Joachim; Rodenburg, Marleen; Roth, Adrian

    2016-01-01

    The recent advent of microphysiological systems - microfluidic biomimetic devices that aspire to emulate the biology of human tissues, organs and circulation in vitro - is envisaged to enable a global paradigm shift in drug development. An extraordinary US governmental initiative and various dedicat

  13. Using parallel evolutionary development for a biologically-inspired computer vision system for mobile robots.

    Science.gov (United States)

    Wright, Cameron H G; Barrett, Steven F; Pack, Daniel J

    2005-01-01

    We describe a new approach to attacking the problem of robust computer vision for mobile robots. The overall strategy is to mimic the biological evolution of animal vision systems. Our basic imaging sensor is based upon the eye of the common house fly, Musca domestica. The computational algorithms are a mix of traditional image processing, subspace techniques, and multilayer neural networks.

  14. Design and characterization of a biologically inspired quasi-passive prosthetic ankle-foot.

    Science.gov (United States)

    Mooney, Luke M; Lai, Cara H; Rouse, Elliott J

    2014-01-01

    By design, commonly worn energy storage and release (ESR) prosthetic feet cannot provide biologically realistic ankle joint torque and angle profiles during walking. Additionally, their anthropomorphic, cantilever architecture causes their mechanical stiffness to decrease throughout the stance phase of walking, opposing the known trend of the biological ankle. In this study, the design of a quasi-passive pneumatic ankle-foot prosthesis is detailed that is able to replicate the biological ankle's torque and angle profiles during walking. The prosthetic ankle is comprised of a pneumatic piston, bending spring and solenoid valve. The mechanical properties of the pneumatic ankle prosthesis are characterized using a materials testing machine and the properties are compared to those from a common, passive ESR prosthetic foot. The characterization spanned a range of ankle equilibrium pressures and testing locations beneath the foot, analogous to the location of center of pressure within the stance phase of walking. The pneumatic ankle prosthesis was shown to provide biologically appropriate trends and magnitudes of torque, angle and stiffness behavior, when compared to the passive ESR prosthetic foot. Future work will focus on the development of a control system for the quasi-passive device and clinical testing of the pneumatic ankle to demonstrate efficacy.

  15. GPU Implementation of Real-Time Biologically Inspired Face Detection using CUDA

    Directory of Open Access Journals (Sweden)

    Elham Askary

    2013-07-01

    Full Text Available In this paper massively parallel real-time face detection based on a visual attention and cortex-like mechanism of cognitive vision system is presented. As a first step, we use saliency map model to select salient face regions and HMAX C1 model to extract features from salient input image and then apply mixture of expert neural network to classify multi-view faces from nonface images. The saliency map model is a complex concept for bottom-up attention selection that includes many processes to find face regions in a visual science. Parallel real-time implementation on Graphics Processing Unit (GPU provides a solution for this kind of computationally intensive image processing. By implementing saliency map and HMAX C1 model on a multi-GPU platform using CUDA programming with memory bandwidth, we achieve good performance compared to recent CPU. Running on NVIDIA Geforce 8800 (GTX graphics card at resolution 640×480 detection rate of 97% is achieved. In addition, we evaluate our results using a height speed camera with other parallel methods on face detection application.

  16. Biological System Behaviours and Natural-inspired Methods and Their Applications to Supply Chain Management

    OpenAIRE

    Fan, Xuemei; Zhang, Shujun; Hapeshi, Kevin; Ynag, Y

    2014-01-01

    People have learnt from biological system behaviours and structures to design and develop a number of different kinds of optimisation algorithms that have been widely used in both theoretical study and practical applications in engineering and business management. An efficient supply chain is very important for companies to survive in global competitive market. An effective SCM (supply chain management) is the key for implement an efficient supply chain. Though there have been considerable am...

  17. Biologically-inspired synthetic dry adhesives for wall-climbing robots

    Science.gov (United States)

    Murphy, Michael P.

    Animals such as insects, spiders, and lizards are capable of clinging to and climbing on a variety of surfaces, from rough stone to smooth silicon. Hairy microscale arrays of structures on their feet conform to surface roughness to create millions of points of contact, creating a large overall contact area. Weak intermolecular forces (van der Waals forces) between each fiber tip and the surface sum to large overall forces due to the high number of contacts. In this work we present the fabrication, characterization, and demonstration of synthetic polyurethane fibrillar adhesives inspired by these animals. Angled polymer micro-fiber arrays are fabricated and characterized. A tip modification technique is presented which enables fabrication of fibers with flat mushroom shaped tips which greatly increase the adhesion of the fibers, up to 5N/cm 2 (normal direction), and with a magnitude within the range of geckos (10 N/cm2) in the shear direction on smooth surfaces. We present a fabrication technique to create fibers with angled flat mushroom-shaped tips which replicate the directional characteristics of geckos, gripping in one direction (within the range of gecko adhesion) and releasing easily in the other. Multilevel hierarchical structures with specialized tips for roughness adaptation are also presented. Fiber hierarchies from the millimeter scale to the sub-micron scale are demonstrated, including three-level fiber fabrication with specialized tips. Hierarchical structures demonstrate up to 5 times the adhesion of an unstructured sample, and requiring up to 10 times the detachment energy. Finally, an agile, wireless, palm-sized wall climbing robot which uses the synthetic fibrillar dry adhesives to climb is presented. Waalbot , named after the van der Waals forces it uses to climb, exploits the attachment and detachment characteristics of the developed dry adhesives, capabilities include climbing smooth surfaces such as glass in any orientation on any surface slope

  18. Biologically-inspired robust and adaptive multi-sensor fusion and active control

    Science.gov (United States)

    Khosla, Deepak; Dow, Paul A.; Huber, David J.

    2009-04-01

    In this paper, we describe a method and system for robust and efficient goal-oriented active control of a machine (e.g., robot) based on processing, hierarchical spatial understanding, representation and memory of multimodal sensory inputs. This work assumes that a high-level plan or goal is known a priori or is provided by an operator interface, which translates into an overall perceptual processing strategy for the machine. Its analogy to the human brain is the download of plans and decisions from the pre-frontal cortex into various perceptual working memories as a perceptual plan that then guides the sensory data collection and processing. For example, a goal might be to look for specific colored objects in a scene while also looking for specific sound sources. This paper combines three key ideas and methods into a single closed-loop active control system. (1) Use high-level plan or goal to determine and prioritize spatial locations or waypoints (targets) in multimodal sensory space; (2) collect/store information about these spatial locations at the appropriate hierarchy and representation in a spatial working memory. This includes invariant learning of these spatial representations and how to convert between them; and (3) execute actions based on ordered retrieval of these spatial locations from hierarchical spatial working memory and using the "right" level of representation that can efficiently translate into motor actions. In its most specific form, the active control is described for a vision system (such as a pantilt- zoom camera system mounted on a robotic head and neck unit) which finds and then fixates on high saliency visual objects. We also describe the approach where the goal is to turn towards and sequentially foveate on salient multimodal cues that include both visual and auditory inputs.

  19. Biologically inspired kinematic synergies enable linear balance control of a humanoid robot.

    Science.gov (United States)

    Hauser, Helmut; Neumann, Gerhard; Ijspeert, Auke J; Maass, Wolfgang

    2011-05-01

    Despite many efforts, balance control of humanoid robots in the presence of unforeseen external or internal forces has remained an unsolved problem. The difficulty of this problem is a consequence of the high dimensionality of the action space of a humanoid robot, due to its large number of degrees of freedom (joints), and of non-linearities in its kinematic chains. Biped biological organisms face similar difficulties, but have nevertheless solved this problem. Experimental data reveal that many biological organisms reduce the high dimensionality of their action space by generating movements through linear superposition of a rather small number of stereotypical combinations of simultaneous movements of many joints, to which we refer as kinematic synergies in this paper. We show that by constructing two suitable non-linear kinematic synergies for the lower part of the body of a humanoid robot, balance control can in fact be reduced to a linear control problem, at least in the case of relatively slow movements. We demonstrate for a variety of tasks that the humanoid robot HOAP-2 acquires through this approach the capability to balance dynamically against unforeseen disturbances that may arise from external forces or from manipulating unknown loads.

  20. Mathematical modeling and simulation of biologically inspired hair receptor arrays in laminar unsteady flow separation

    Science.gov (United States)

    Dickinson, B. T.; Singler, J. R.; Batten, B. A.

    2012-02-01

    Bats possess arrays of distributed flow-sensitive hair-like mechanoreceptors on their dorsal and ventral wing surfaces. Bat wing hair receptors are known to play a significant role in flight maneuverability and are directionally most sensitive to reversed flow over the wing. In this work, we consider the mechanics of flexible hair-like structures for the time accurate detection and visualization of hydrodynamic images associated with unsteady near surface flow phenomena. A nonlinear viscoelastic model of a hair-like structure coupled to an unsteady nonuniform flow is proposed. Writing the hair model in nondimensional form, we identify five dimensionless groups that govern hair behavior. An order of magnitude analysis of the physical forces involved in the fluid-structure hair response is performed. Through the choice of hair material properties, we show how a local measure of near surface flow velocity may be obtained from hair tip displacement and resultant moment. When hair structures are placed into an array, time and space accurate hydrodynamic images may be obtained. We illustrate the imaging of reversed flow that occurs during a laminar unsteady flow separation with an array of hair-like structures.

  1. Biologically Inspired Design Principles for Scalable, Robust, Adaptive, Decentralized Search and Automated Response (RADAR)

    CERN Document Server

    Moses, Melanie

    2010-01-01

    Distributed search problems are ubiquitous in Artificial Life (ALife). Many distributed search problems require identifying a rare and previously unseen event and producing a rapid response. This challenge amounts to finding and removing an unknown needle in a very large haystack. Traditional computational search models are unlikely to find, nonetheless, appropriately respond to, novel events, particularly given data distributed across multiple platforms in a variety of formats and sources with variable and unknown reliability. Biological systems have evolved solutions to distributed search and response under uncertainty. Immune systems and ant colonies efficiently scale up massively parallel search with automated response in highly dynamic environments, and both do so using distributed coordination without centralized control. These properties are relevant to ALife, where distributed, autonomous, robust and adaptive control is needed to design robot swarms, mobile computing networks, computer security system...

  2. Biology-inspired microphysiological system approaches to solve the prediction dilemma of substance testing.

    Science.gov (United States)

    Marx, Uwe; Andersson, Tommy B; Bahinski, Anthony; Beilmann, Mario; Beken, Sonja; Cassee, Flemming R; Cirit, Murat; Daneshian, Mardas; Fitzpatrick, Susan; Frey, Olivier; Gaertner, Claudia; Giese, Christoph; Griffith, Linda; Hartung, Thomas; Heringa, Minne B; Hoeng, Julia; de Jong, Wim H; Kojima, Hajime; Kuehnl, Jochen; Leist, Marcel; Luch, Andreas; Maschmeyer, Ilka; Sakharov, Dmitry; Sips, Adrienne J A M; Steger-Hartmann, Thomas; Tagle, Danilo A; Tonevitsky, Alexander; Tralau, Tewes; Tsyb, Sergej; van de Stolpe, Anja; Vandebriel, Rob; Vulto, Paul; Wang, Jufeng; Wiest, Joachim; Rodenburg, Marleen; Roth, Adrian

    2016-01-01

    The recent advent of microphysiological systems - microfluidic biomimetic devices that aspire to emulate the biology of human tissues, organs and circulation in vitro - is envisaged to enable a global paradigm shift in drug development. An extraordinary US governmental initiative and various dedicated research programs in Europe and Asia have led recently to the first cutting-edge achievements of human single-organ and multi-organ engineering based on microphysiological systems. The expectation is that test systems established on this basis would model various disease stages, and predict toxicity, immunogenicity, ADME profiles and treatment efficacy prior to clinical testing. Consequently, this technology could significantly affect the way drug substances are developed in the future. Furthermore, microphysiological system-based assays may revolutionize our current global programs of prioritization of hazard characterization for any new substances to be used, for example, in agriculture, food, ecosystems or cosmetics, thus, replacing laboratory animal models used currently. Thirty-six experts from academia, industry and regulatory bodies present here the results of an intensive workshop (held in June 2015, Berlin, Germany). They review the status quo of microphysiological systems available today against industry needs, and assess the broad variety of approaches with fit-for-purpose potential in the drug development cycle. Feasible technical solutions to reach the next levels of human biology in vitro are proposed. Furthermore, key organ-on-a-chip case studies, as well as various national and international programs are highlighted. Finally, a roadmap into the future is outlined, to allow for more predictive and regulatory-accepted substance testing on a global scale.

  3. Using surface imaging and visual coaching to improve the reproducibility and stability of deep-inspiration breath hold for left-breast-cancer radiotherapy

    Science.gov (United States)

    Cerviño, Laura I.; Gupta, Sonia; Rose, Mary A.; Yashar, Catheryn; Jiang, Steve B.

    2009-11-01

    Late cardiac complications may arise after left-breast radiation therapy. Deep-inspiration breath hold (DIBH) allows reduction of the irradiated heart volume at the same time as it reduces tumor bed motion and increases lung sparing. In the present study, we have evaluated the improvement in reproducibility and stability of the DIBH for left-breast-cancer treatment when visual coaching is provided with the aid of 3D video surface imaging and video goggles. Five left-breast-cancer patients and fifteen healthy volunteers were asked to perform a series of DIBHs without and with visual coaching. Reproducibility and stability of DIBH were measured for each individual with and without visual coaching. The average reproducibility and stability changed from 2.1 mm and 1.5 mm, respectively, without visual feedback to 0.5 mm and 0.7 mm with visual feedback, showing a significant statistical difference (p 2 mm) in reproducibility and stability were observed in 35% and 15% of the subjects, respectively. The average chest wall excursion of the DIBH with respect to the free breathing preceding the DIBH was found to be 11.3 mm. The reproducibility and stability of the DIBH improve significantly from the visual coaching provided to the patient, especially in those patients with poor reproducibility and stability.

  4. Structural dynamics and aerodynamics measurements of biologically inspired flexible flapping wings

    Energy Technology Data Exchange (ETDEWEB)

    Wu, P; Stanford, B K; Ifju, P G [Department of Mechanical and Aerospace Engineering, MAE-A 231, University of Florida, Gainesville, FL 32611 (United States); Saellstroem, E; Ukeiley, L, E-mail: diccidwp@ufl.edu [Department of Mechanical and Aerospace Engineering, University of Florida, Shalimar, FL 32579 (United States)

    2011-03-15

    Flapping wing flight as seen in hummingbirds and insects poses an interesting unsteady aerodynamic problem: coupling of wing kinematics, structural dynamics and aerodynamics. There have been numerous studies on the kinematics and aerodynamics in both experimental and computational cases with both natural and artificial wings. These studies tend to ignore wing flexibility; however, observation in nature affirms that passive wing deformation is predominant and may be crucial to the aerodynamic performance. This paper presents a multidisciplinary experimental endeavor in correlating a flapping micro air vehicle wing's aeroelasticity and thrust production, by quantifying and comparing overall thrust, structural deformation and airflow of six pairs of hummingbird-shaped membrane wings of different properties. The results show that for a specific spatial distribution of flexibility, there is an effective frequency range in thrust production. The wing deformation at the thrust-productive frequencies indicates the importance of flexibility: both bending and twisting motion can interact with aerodynamic loads to enhance wing performance under certain conditions, such as the deformation phase and amplitude. By measuring structural deformations under the same aerodynamic conditions, beneficial effects of passive wing deformation can be observed from the visualized airflow and averaged thrust. The measurements and their presentation enable observation and understanding of the required structural properties for a thrust effective flapping wing. The intended passive responses of the different wings follow a particular pattern in correlation to their aerodynamic performance. Consequently, both the experimental technique and data analysis method can lead to further studies to determine the design principles for micro air vehicle flapping wings.

  5. Biologically inspired information theory: Adaptation through construction of external reality models by living systems.

    Science.gov (United States)

    Nakajima, Toshiyuki

    2015-12-01

    Higher animals act in the world using their external reality models to cope with the uncertain environment. Organisms that have not developed such information-processing organs may also have external reality models built in the form of their biochemical, physiological, and behavioral structures, acquired by natural selection through successful models constructed internally. Organisms subject to illusions would fail to survive in the material universe. How can organisms, or living systems in general, determine the external reality from within? This paper starts with a phenomenological model, in which the self constitutes a reality model developed through the mental processing of phenomena. Then, the it-from-bit concept is formalized using a simple mathematical model. For this formalization, my previous work on an algorithmic process is employed to constitute symbols referring to the external reality, called the inverse causality, with additional improvements to the previous work. Finally, as an extension of this model, the cognizers system model is employed to describe the self as one of many material entities in a world, each of which acts as a subject by responding to the surrounding entities. This model is used to propose a conceptual framework of information theory that can deal with both the qualitative (semantic) and quantitative aspects of the information involved in biological processes.

  6. A biologically inspired modular structure to control the sit-to-stand transfer of a biped robot.

    Science.gov (United States)

    Andani, M Emadi; Bahrami, F; Maralani, P Jabedar

    2007-01-01

    In this study, a biologically inspired control structure to control the sit-to-stand (STS) transfer from a chair is developed and simulated. STS movement is consisted of two main phases. First phase of the movement is before leaving the seat (seat-off moment). In this phase seat reactions forces act on the body parts which are in contact with the seat. The second phase is after seat-off, where the only external forces acting on the body are ground reaction forces. A proper control algorithm of the STS transfer needs to consider switching between these two phases, which correspond to two different dynamical structures. The control structure developed and discussed in this work is based on the MOSAIC structure, proposed first by Wolpert and Kawato [1]. Original MOSAIC structure has a modular architecture which is based on multiple pairs of forward and inverse models of the dynamical system to be controlled, and each module is trained separately to learn one part of a given task. The number of effective modules is predetermined. We have developed a new method to train all modules simultaneously. This method is based on reinforcement and cooperative competitive learning, and the number of effective modules is determined automatically. In this study, the simulation was begun with four modules. Our results showed that only two modules out of four were selected to control the STS task. Responsibility of controlling the task was switched between the two modules around the seat-off moment.

  7. Dynamics Analysis of Fluid-Structure Interaction for a Biologically-inspired Biped Robot Running on Water

    Directory of Open Access Journals (Sweden)

    Linsen Xu

    2013-10-01

    Full Text Available A kinematics analysis of a biologically-inspired biped robot is carried out, and the trajectory of the robot foot is understood. For calculating the pressure distribution across a robot foot before touching the surface of water, the compression flow of air and the depression motion of the water surface are considered. The pressure model after touching the water surface has been built according to the theory of rigid body planar motion. The multi-material ALE algorithm is applied to emulate the course of the foot slapping water. The simulation results indicate that the model of the bionic robot can satisfy the water-running function. The real prototype of the robot is manufactured to test its function of running on water. When the biped robot is running on water, the average force generated by the propulsion mechanism is about 1.3N. The experimental results show that the propulsion system can satisfy the requirement of biped robot running on water.

  8. Writing Inspired

    Science.gov (United States)

    Tischhauser, Karen

    2015-01-01

    Students need inspiration to write. Assigning is not teaching. In order to inspire students to write fiction worth reading, teachers must take them through the process of writing. Physical objects inspire good writing with depth. In this article, the reader will be taken through the process of inspiring young writers through the use of boxes.…

  9. Insect Bio-inspired Neural Network Provides New Evidence on How Simple Feature Detectors Can Enable Complex Visual Generalization and Stimulus Location Invariance in the Miniature Brain of Honeybees

    Science.gov (United States)

    Fernando, Chrisantha

    2017-01-01

    The ability to generalize over naturally occurring variation in cues indicating food or predation risk is highly useful for efficient decision-making in many animals. Honeybees have remarkable visual cognitive abilities, allowing them to classify visual patterns by common features despite having a relatively miniature brain. Here we ask the question whether generalization requires complex visual recognition or whether it can also be achieved with relatively simple neuronal mechanisms. We produced several simple models inspired by the known anatomical structures and neuronal responses within the bee brain and subsequently compared their ability to generalize achromatic patterns to the observed behavioural performance of honeybees on these cues. Neural networks with just eight large-field orientation-sensitive input neurons from the optic ganglia and a single layer of simple neuronal connectivity within the mushroom bodies (learning centres) show performances remarkably similar to a large proportion of the empirical results without requiring any form of learning, or fine-tuning of neuronal parameters to replicate these results. Indeed, a model simply combining sensory input from both eyes onto single mushroom body neurons returned correct discriminations even with partial occlusion of the patterns and an impressive invariance to the location of the test patterns on the eyes. This model also replicated surprising failures of bees to discriminate certain seemingly highly different patterns, providing novel and useful insights into the inner workings facilitating and limiting the utilisation of visual cues in honeybees. Our results reveal that reliable generalization of visual information can be achieved through simple neuronal circuitry that is biologically plausible and can easily be accommodated in a tiny insect brain. PMID:28158189

  10. Insect Bio-inspired Neural Network Provides New Evidence on How Simple Feature Detectors Can Enable Complex Visual Generalization and Stimulus Location Invariance in the Miniature Brain of Honeybees.

    Science.gov (United States)

    Roper, Mark; Fernando, Chrisantha; Chittka, Lars

    2017-02-01

    The ability to generalize over naturally occurring variation in cues indicating food or predation risk is highly useful for efficient decision-making in many animals. Honeybees have remarkable visual cognitive abilities, allowing them to classify visual patterns by common features despite having a relatively miniature brain. Here we ask the question whether generalization requires complex visual recognition or whether it can also be achieved with relatively simple neuronal mechanisms. We produced several simple models inspired by the known anatomical structures and neuronal responses within the bee brain and subsequently compared their ability to generalize achromatic patterns to the observed behavioural performance of honeybees on these cues. Neural networks with just eight large-field orientation-sensitive input neurons from the optic ganglia and a single layer of simple neuronal connectivity within the mushroom bodies (learning centres) show performances remarkably similar to a large proportion of the empirical results without requiring any form of learning, or fine-tuning of neuronal parameters to replicate these results. Indeed, a model simply combining sensory input from both eyes onto single mushroom body neurons returned correct discriminations even with partial occlusion of the patterns and an impressive invariance to the location of the test patterns on the eyes. This model also replicated surprising failures of bees to discriminate certain seemingly highly different patterns, providing novel and useful insights into the inner workings facilitating and limiting the utilisation of visual cues in honeybees. Our results reveal that reliable generalization of visual information can be achieved through simple neuronal circuitry that is biologically plausible and can easily be accommodated in a tiny insect brain.

  11. VISUALIZATION APPROACH TO STRUCTURE-FUNCTION RELATIONSHIP IN BIOLOGICAL MACROMOLECULES

    Directory of Open Access Journals (Sweden)

    M. Luetić

    2015-08-01

    Full Text Available Introduction: Most of recent research in the field of education strongly recommends the use of visualization in the daily teacher’s practice, especially when it comes to teaching science. Objectives: We investigated the impact of different kinds of visualization on student’s accomplishments, and the relationship between 2D and 3D visualization on the learning outcomes in biochemistry teaching, as well as gender-related differences in 2D vs 3D perception abilities. Materials and Methods: The research study was conducted on a sample of 149 senior secondary school students, devided into three groups: control group (usual teaching approach, and two experimental groups taught using different kinds of visualization: E1 (2D and 3D static visualization tools, and E2 (3D dynamic visualization tools, in addition. Discussion and results: We measured the students’ learning outcomes in biochemistry, as well as the level of satisfaction with different teaching methods. The data were interpreted by performing statistical measures and analyses. In order to validate our hypothesis, we used one-tail and two-tail ANOVA analyses (along with the t-test.Conclusions: There was no statistical significance regarding 2D vs 3D visualization tools in biochemistry teaching. Although there existed some gender-related differences in students’ achievements (in favor of females, it was not established that they were related to the type of visualization (2D or 3D tools applied. However students from the E2 group (additional computer animations were more interested and involved in this kind of teaching. Although the results do not show a statistical significance in favor of 3D visualization, we must conclude that in teaching biochemistry it is certainly a more efficient approach than traditional teacher-oriented lessons. By using this kind of visualization tools in everyday teaching practice, chemistry teachers are given the opportunity to enlighten students with somewhat

  12. On the Optimum Architecture of the Biologically Inspired Hierarchical Temporal Memory Model Applied to the Hand-Written Digit Recognition

    Science.gov (United States)

    Štolc, Svorad; Bajla, Ivan

    2010-01-01

    In the paper we describe basic functions of the Hierarchical Temporal Memory (HTM) network based on a novel biologically inspired model of the large-scale structure of the mammalian neocortex. The focus of this paper is in a systematic exploration of possibilities how to optimize important controlling parameters of the HTM model applied to the classification of hand-written digits from the USPS database. The statistical properties of this database are analyzed using the permutation test which employs a randomization distribution of the training and testing data. Based on a notion of the homogeneous usage of input image pixels, a methodology of the HTM parameter optimization is proposed. In order to study effects of two substantial parameters of the architecture: the patch size and the overlap in more details, we have restricted ourselves to the single-level HTM networks. A novel method for construction of the training sequences by ordering series of the static images is developed. A novel method for estimation of the parameter maxDist based on the box counting method is proposed. The parameter sigma of the inference Gaussian is optimized on the basis of the maximization of the belief distribution entropy. Both optimization algorithms can be equally applied to the multi-level HTM networks as well. The influences of the parameters transitionMemory and requestedGroupCount on the HTM network performance have been explored. Altogether, we have investigated 2736 different HTM network configurations. The obtained classification accuracy results have been benchmarked with the published results of several conventional classifiers.

  13. The essence of student visual-spatial literacy and higher order thinking skills in undergraduate biology.

    Science.gov (United States)

    Milner-Bolotin, Marina; Nashon, Samson Madera

    2012-02-01

    Science, engineering and mathematics-related disciplines have relied heavily on a researcher's ability to visualize phenomena under study and being able to link and superimpose various abstract and concrete representations including visual, spatial, and temporal. The spatial representations are especially important in all branches of biology (in developmental biology time becomes an important dimension), where 3D and often 4D representations are crucial for understanding the phenomena. By the time biology students get to undergraduate education, they are supposed to have acquired visual-spatial thinking skills, yet it has been documented that very few undergraduates and a small percentage of graduate students have had a chance to develop these skills to a sufficient degree. The current paper discusses the literature that highlights the essence of visual-spatial thinking and the development of visual-spatial literacy, considers the application of the visual-spatial thinking to biology education, and proposes how modern technology can help to promote visual-spatial literacy and higher order thinking among undergraduate students of biology.

  14. Reflections on Supporting a Visually Impaired Student Complete a Biological Psychology Module

    Science.gov (United States)

    Betts, Lucy R.; Cross, Amanda

    2010-01-01

    While there are a number of technologies that have been used, with varying levels of success, to support visually impaired students, the purpose of this article is to reflect upon the authors' experiences of supporting a visually impaired student through a nine-month level two undergraduate biological psychology module. The authors developed a…

  15. HISTCOMP : Bibliographic analysis and visualization of the "Biological Bulletin”

    OpenAIRE

    Wulff-Barreiro, Enrique

    2007-01-01

    A collection of citation data, the HistComp, is available from the Internet as a database of examples of real life citation networks. The purposes of this approach is the analysis of these citation networks on learned literature by presenting its typical steps and results. We have selected the bibliographic insights into the "The Biological Bulletin", the journal published since 1897 by the Woods Hole Marine Biological Laboratory. Since the bibliographic networks tend to be very scattered, th...

  16. Inspired Responses

    Science.gov (United States)

    Steele, Carol Frederick

    2011-01-01

    In terms of teacher quality, Steele believes the best teachers have reached a stage she terms inspired, and that teachers move progressively through the stages of unaware, aware, and capable until the most reflective teachers finally reach the inspired level. Inspired teachers have a wide repertoire of teaching and class management techniques and…

  17. Bio-inspired vision

    Science.gov (United States)

    Posch, C.

    2012-01-01

    Nature still outperforms the most powerful computers in routine functions involving perception, sensing and actuation like vision, audition, and motion control, and is, most strikingly, orders of magnitude more energy-efficient than its artificial competitors. The reasons for the superior performance of biological systems are subject to diverse investigations, but it is clear that the form of hardware and the style of computation in nervous systems are fundamentally different from what is used in artificial synchronous information processing systems. Very generally speaking, biological neural systems rely on a large number of relatively simple, slow and unreliable processing elements and obtain performance and robustness from a massively parallel principle of operation and a high level of redundancy where the failure of single elements usually does not induce any observable system performance degradation. In the late 1980`s, Carver Mead demonstrated that silicon VLSI technology can be employed in implementing ``neuromorphic'' circuits that mimic neural functions and fabricating building blocks that work like their biological role models. Neuromorphic systems, as the biological systems they model, are adaptive, fault-tolerant and scalable, and process information using energy-efficient, asynchronous, event-driven methods. In this paper, some basics of neuromorphic electronic engineering and its impact on recent developments in optical sensing and artificial vision are presented. It is demonstrated that bio-inspired vision systems have the potential to outperform conventional, frame-based vision acquisition and processing systems in many application fields and to establish new benchmarks in terms of redundancy suppression/data compression, dynamic range, temporal resolution and power efficiency to realize advanced functionality like 3D vision, object tracking, motor control, visual feedback loops, etc. in real-time. It is argued that future artificial vision systems

  18. Biology-oriented synthesis of a natural-product inspired oxepane collection yields a small-molecule activator of the Wnt-pathway.

    Science.gov (United States)

    Basu, Sudipta; Ellinger, Bernhard; Rizzo, Stefano; Deraeve, Céline; Schürmann, Markus; Preut, Hans; Arndt, Hans-Dieter; Waldmann, Herbert

    2011-04-26

    In Biology Oriented Synthesis the scaffolds of biologically relevant compound classes inspire the synthesis of focused compound collections enriched in bioactivity. This criterion is met by the structurally complex scaffolds of natural products (NPs) selected in evolution. The synthesis of NP-inspired compound collections approaching the complexity of NPs calls for the development of efficient synthetic methods. We have developed a one pot 4-7 step synthesis of mono-, bi-, and tricyclic oxepanes that resemble the core scaffolds of numerous NPs with diverse bioactivities. This sequence entails a ring-closing ene-yne metathesis reaction as key step and makes productive use of polymer-immobilized scavenger reagents. Biological profiling of a corresponding focused compound collection in a reporter gene assay monitoring for Wnt-signaling modulation revealed active Wntepanes. This unique class of small-molecule activators of the Wnt pathway modulates the van-Gogh-like receptor proteins (Vangl), which were previously identified in noncanonical Wnt signaling, and acts in synergy with the canonical activator protein (Wnt-3a).

  19. Proofs of the Technical Results Justifying a Biologically Inspired Algorithm for Reactive Navigation of Nonholonomic Robots in Maze-Like Environments

    CERN Document Server

    Matveev, Alexey S; Savkin, Andrey V

    2011-01-01

    We present technical results justifying a method for guidance of a Dubins-like vehicle with saturated control towards a target in a steady simply connected maze-like environment. The vehicle always has access to to the target relative bearing angle and the distance to the nearest point of the maze if it is within the given sensor range. The proposed control law is composed by biologically inspired reflex-level rules. Mathematically rigorous analysis of this law is provided; its convergence and performance are confirmed by computer simulations and experiments with real robots.

  20. Visual analysis of transcriptome data in the context of anatomical structures and biological networks

    Directory of Open Access Journals (Sweden)

    Astrid eJunker

    2012-11-01

    Full Text Available The complexity and temporal as well as spatial resolution of transcriptome datasets is constantly increasing due to extensive technological developments. Here we present methods for advanced visualization and intuitive exploration of transcriptomics data as necessary prerequisites in order to facilitate the gain of biological knowledge. Color-coding of structural images based on the expression level enables a fast visual data analysis in the background of the examined biological system. The network-based exploration of these visualizations allows for comparative analysis of genes with specific transcript patterns and supports the extraction of functional relationships even from large datasets. In order to illustrate the presented methods, the tool HIVE was applied for visualization and exploration of database-retrieved expression data for master regulators of Arabidopsis thaliana flower and seed development in the context of corresponding tissue-specific regulatory networks.

  1. BiNA: a visual analytics tool for biological network data.

    Directory of Open Access Journals (Sweden)

    Andreas Gerasch

    Full Text Available Interactive visual analysis of biological high-throughput data in the context of the underlying networks is an essential task in modern biomedicine with applications ranging from metabolic engineering to personalized medicine. The complexity and heterogeneity of data sets require flexible software architectures for data analysis. Concise and easily readable graphical representation of data and interactive navigation of large data sets are essential in this context. We present BiNA--the Biological Network Analyzer--a flexible open-source software for analyzing and visualizing biological networks. Highly configurable visualization styles for regulatory and metabolic network data offer sophisticated drawings and intuitive navigation and exploration techniques using hierarchical graph concepts. The generic projection and analysis framework provides powerful functionalities for visual analyses of high-throughput omics data in the context of networks, in particular for the differential analysis and the analysis of time series data. A direct interface to an underlying data warehouse provides fast access to a wide range of semantically integrated biological network databases. A plugin system allows simple customization and integration of new analysis algorithms or visual representations. BiNA is available under the 3-clause BSD license at http://bina.unipax.info/.

  2. A biologically inspired attachable, self-standing nanofibrous membrane for versatile use in oil-water separation

    Science.gov (United States)

    Tenjimbayashi, Mizuki; Sasaki, Kaichi; Matsubayashi, Takeshi; Abe, Jyunichiro; Manabe, Kengo; Nishioka, Sachiko; Shiratori, Seimei

    2016-05-01

    Uloborus walckenaerius spider webs provided the inspiration for attachable, self-standing nanofibre sheets. The developed product adds selective wettability against oil-water mixtures to both 2D and 3D materials by attaching or covering them, leading to successful separation through a facile, scalable and low-cost process.Uloborus walckenaerius spider webs provided the inspiration for attachable, self-standing nanofibre sheets. The developed product adds selective wettability against oil-water mixtures to both 2D and 3D materials by attaching or covering them, leading to successful separation through a facile, scalable and low-cost process. Electronic supplementary information (ESI) available: Experimental section, designing procedure, cost, cross sectional SEM, influence of NFs-S components to wettability, thickness, fibre diameter and flexibility, surface tension vs. contact angle, SEM images after extraction of oil, characteristics of testing oil, large scale-fabrication of NFs-S. See DOI: 10.1039/c6nr03349k

  3. JColorGrid: software for the visualization of biological measurements

    Directory of Open Access Journals (Sweden)

    May Barnaby CH

    2006-04-01

    Full Text Available Abstract Background Two-dimensional data colourings are an effective medium by which to represent three-dimensional data in two dimensions. Such "color-grid" representations have found increasing use in the biological sciences (e.g. microarray 'heat maps' and bioactivity data as they are particularly suited to complex data sets and offer an alternative to the graphical representations included in traditional statistical software packages. The effectiveness of color-grids lies in their graphical design, which introduces a standard for customizable data representation. Currently, software applications capable of generating limited color-grid representations can be found only in advanced statistical packages or custom programs (e.g. micro-array analysis tools, often associated with steep learning curves and requiring expert knowledge. Results Here we describe JColorGrid, a Java library and platform independent application that renders color-grid graphics from data. The software can be used as a Java library, as a command-line application, and as a color-grid parameter interface and graphical viewer application. Data, titles, and data labels are input as tab-delimited text files or Microsoft Excel spreadsheets and the color-grid settings are specified through the graphical interface or a text configuration file. JColorGrid allows both user graphical data exploration as well as a means of automatically rendering color-grids from data as part of research pipelines. Conclusion The program has been tested on Windows, Mac, and Linux operating systems, and the binary executables and source files are available for download at http://jcolorgrid.ucsf.edu.

  4. Improving Synthetic Biology Communication: Recommended Practices for Visual Depiction and Digital Submission of Genetic Designs.

    Science.gov (United States)

    Hillson, Nathan J; Plahar, Hector A; Beal, Jacob; Prithviraj, Ranjini

    2016-06-17

    Research is communicated more effectively and reproducibly when articles depict genetic designs consistently and fully disclose the complete sequences of all reported constructs. ACS Synthetic Biology is now providing authors with updated guidance and piloting a new tool and publication workflow that facilitate compliance with these recommended practices and standards for visual representation and data exchange.

  5. A simpler and more accurate AUTO-HDS framework for clustering and visualization of biological data.

    Science.gov (United States)

    Campello, Ricardo J G B; Moulavi, Davoud; Sander, Jörg

    2012-01-01

    In [1], the authors proposed a framework for automated clustering and visualization of biological data sets named AUTO-HDS. This letter is intended to complement that framework by showing that it is possible to get rid of a user-defined parameter in a way that the clustering stage can be implemented more accurately while having reduced computational complexity.

  6. Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future.

    Science.gov (United States)

    Pavlopoulos, Georgios A; Malliarakis, Dimitris; Papanikolaou, Nikolas; Theodosiou, Theodosis; Enright, Anton J; Iliopoulos, Ioannis

    2015-01-01

    "Α picture is worth a thousand words." This widely used adage sums up in a few words the notion that a successful visual representation of a concept should enable easy and rapid absorption of large amounts of information. Although, in general, the notion of capturing complex ideas using images is very appealing, would 1000 words be enough to describe the unknown in a research field such as the life sciences? Life sciences is one of the biggest generators of enormous datasets, mainly as a result of recent and rapid technological advances; their complexity can make these datasets incomprehensible without effective visualization methods. Here we discuss the past, present and future of genomic and systems biology visualization. We briefly comment on many visualization and analysis tools and the purposes that they serve. We focus on the latest libraries and programming languages that enable more effective, efficient and faster approaches for visualizing biological concepts, and also comment on the future human-computer interaction trends that would enable for enhancing visualization further.

  7. Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways

    DEFF Research Database (Denmark)

    King, Zachary A.; Draeger, Andreas; Ebrahim, Ali;

    2015-01-01

    Escher is a web application for visualizing data on biological pathways. Three key features make Escher a uniquely effective tool for pathway visualization. First, users can rapidly design new pathway maps. Escher provides pathway suggestions based on user data and genome-scale models, so users can......IP)-in conjunction with metabolite-and reaction-oriented data types (e.g. metabolomics, fluxomics). Third, Escher harnesses the strengths of web technologies (SVG, D3, developer tools) so that visualizations can be rapidly adapted, extended, shared, and embedded. This paper provides examples of each...... of these features and explains how the development approach used for Escher can be used to guide the development of future visualization tools....

  8. Psychophysical study of the visual sun location in pictures of cloudy and twilight skies inspired by Viking navigation.

    Science.gov (United States)

    Barta, András; Horváth, Gábor; Meyer-Rochow, Victor Benno

    2005-06-01

    In the late 1960s it was hypothesized that Vikings had been able to navigate the open seas, even when the sun was occluded by clouds or below the sea horizon, by using the angle of polarization of skylight. To detect the direction of skylight polarization, they were thought to have made use of birefringent crystals, called "sun-stones," and a large part of the scientific community still firmly believe that Vikings were capable of polarimetric navigation. However, there are some critics who treat the usefulness of skylight polarization for orientation under partly cloudy or twilight conditions with extreme skepticism. One of their counterarguments has been the assumption that solar positions or solar azimuth directions could be estimated quite accurately by the naked eye, even if the sun was behind clouds or below the sea horizon. Thus under partly cloudy or twilight conditions there might have been no serious need for a polarimetric method to determine the position of the sun. The aim of our study was to test quantitatively the validity of this qualitative counterargument. In our psychophysical laboratory experiments, test subjects were confronted with numerous 180 degrees field-of-view color photographs of partly cloudy skies with the sun occluded by clouds or of twilight skies with the sun below the horizon. The task of the subjects was to guess the position or the azimuth direction of the invisible sun with the naked eye. We calculated means and standard deviations of the estimated solar positions and azimuth angles to characterize the accuracy of the visual sun location. Our data do not support the common belief that the invisible sun can be located quite accurately from the celestial brightness and/or color patterns under cloudy or twilight conditions. Although our results underestimate the accuracy of visual sun location by experienced Viking navigators, the mentioned counterargument cannot be taken seriously as a valid criticism of the theory of the alleged

  9. Modeling biology with HDL languages: a first step toward a genetic design automation tool inspired from microelectronics.

    Science.gov (United States)

    Gendrault, Yves; Madec, Morgan; Lallement, Christophe; Haiech, Jacques

    2014-04-01

    Nowadays, synthetic biology is a hot research topic. Each day, progresses are made to improve the complexity of artificial biological functions in order to tend to complex biodevices and biosystems. Up to now, these systems are handmade by bioengineers, which require strong technical skills and leads to nonreusable development. Besides, scientific fields that share the same design approach, such as microelectronics, have already overcome several issues and designers succeed in building extremely complex systems with many evolved functions. On the other hand, in systems engineering and more specifically in microelectronics, the development of the domain has been promoted by both the improvement of technological processes and electronic design automation tools. The work presented in this paper paves the way for the adaptation of microelectronics design tools to synthetic biology. Considering the similarities and differences between the synthetic biology and microelectronics, the milestones of this adaptation are described. The first one concerns the modeling of biological mechanisms. To do so, a new formalism is proposed, based on an extension of the generalized Kirchhoff laws to biology. This way, a description of all biological mechanisms can be made with languages widely used in microelectronics. Our approach is therefore successfully validated on specific examples drawn from the literature.

  10. Extending human perception of electromagnetic radiation to the UV region through biologically inspired photochromic fuzzy logic (BIPFUL) systems.

    Science.gov (United States)

    Gentili, Pier Luigi; Rightler, Amanda L; Heron, B Mark; Gabbutt, Christopher D

    2016-01-25

    Photochromic fuzzy logic systems have been designed that extend human visual perception into the UV region. The systems are founded on a detailed knowledge of the activation wavelengths and quantum yields of a series of thermally reversible photochromic compounds. By appropriate matching of the photochromic behaviour unique colour signatures are generated in response differing UV activation frequencies.

  11. Visualization

    OpenAIRE

    Balon, Andreja

    1990-01-01

    The present thesis entails the field of visualization which is divided into visualization along traditional lines and visualization in computer science. As the psychological aspect of image is of vital importance for visualization, it is shortly described in the beginning. Visualization in computer science is divided into three main fields: scientific visualization, program visualization and visual programming. An explanation and examples of approach to applications are given for each field....

  12. A Reconfigurable and Biologically Inspired Paradigm for Computation Using Network-On-Chip and Spiking Neural Networks

    OpenAIRE

    Jim Harkin; Fearghal Morgan; Liam McDaid; Steve Hall; Brian McGinley; Seamus Cawley

    2009-01-01

    FPGA devices have emerged as a popular platform for the rapid prototyping of biological Spiking Neural Networks (SNNs) applications, offering the key requirement of reconfigurability. However, FPGAs do not efficiently realise the biologically plausible neuron and synaptic models of SNNs, and current FPGA routing structures cannot accommodate the high levels of interneuron connectivity inherent in complex SNNs. This paper highlights and discusses the current challenges of implementing scalable...

  13. In Vivo Bioluminescent Imaging (BLI: Noninvasive Visualization and Interrogation of Biological Processes in Living Animals

    Directory of Open Access Journals (Sweden)

    Steven Ripp

    2010-12-01

    Full Text Available In vivo bioluminescent imaging (BLI is increasingly being utilized as a method for modern biological research. This process, which involves the noninvasive interrogation of living animals using light emitted from luciferase-expressing bioreporter cells, has been applied to study a wide range of biomolecular functions such as gene function, drug discovery and development, cellular trafficking, protein-protein interactions, and especially tumorigenesis, cancer treatment, and disease progression. This article will review the various bioreporter/biosensor integrations of BLI and discuss how BLI is being applied towards a new visual understanding of biological processes within the living organism.

  14. In Vivo Bioluminescent Imaging (BLI): Noninvasive Visualization and Interrogation of Biological Processes in Living Animals

    Science.gov (United States)

    Close, Dan M.; Xu, Tingting; Sayler, Gary S.; Ripp, Steven

    2011-01-01

    In vivo bioluminescent imaging (BLI) is increasingly being utilized as a method for modern biological research. This process, which involves the noninvasive interrogation of living animals using light emitted from luciferase-expressing bioreporter cells, has been applied to study a wide range of biomolecular functions such as gene function, drug discovery and development, cellular trafficking, protein-protein interactions, and especially tumorigenesis, cancer treatment, and disease progression. This article will review the various bioreporter/biosensor integrations of BLI and discuss how BLI is being applied towards a new visual understanding of biological processes within the living organism. PMID:22346573

  15. VisBOL: Web-Based Tools for Synthetic Biology Design Visualization.

    Science.gov (United States)

    McLaughlin, James Alastair; Pocock, Matthew; Mısırlı, Göksel; Madsen, Curtis; Wipat, Anil

    2016-08-19

    VisBOL is a Web-based application that allows the rendering of genetic circuit designs, enabling synthetic biologists to visually convey designs in SBOL visual format. VisBOL designs can be exported to formats including PNG and SVG images to be embedded in Web pages, presentations and publications. The VisBOL tool enables the automated generation of visualizations from designs specified using the Synthetic Biology Open Language (SBOL) version 2.0, as well as a range of well-known bioinformatics formats including GenBank and Pigeoncad notation. VisBOL is provided both as a user accessible Web site and as an open-source (BSD) JavaScript library that can be used to embed diagrams within other content and software.

  16. Biologically inspired highly durable iron phthalocyanine catalysts for oxygen reduction reaction in polymer electrolyte membrane fuel cells.

    Science.gov (United States)

    Li, Wenmu; Yu, Aiping; Higgins, Drew C; Llanos, Bernard G; Chen, Zhongwei

    2010-12-08

    In the present work, we have designed and synthesized a new highly durable iron phtalocyanine based nonprecious oxygen reduction reaction (ORR) catalyst (Fe-SPc) for polymer electrolyte membrane fuel cells (PEMFCs). The Fe-SPc, with a novel structure inspired by that of naturally occurring oxygen activation catalysts, is prepared by a nonpyrolyzing method, allowing adequate control of the atomic structure and surface properties of the material. Significantly improved ORR stability of the Fe-SPc is observed compared with the commercial Fe-Pc catalysts. The Fe-SPc has similar activity to that of the commercial Fe-Pc initially, while the Fe-SPc displays 4.6 times higher current density than that of the commercial Fe-Pc after 10 sweep potential cycles, and a current density that is 7.4 times higher after 100 cycles. This has been attributed to the incorporation of electron-donating functional groups, along with a high degree of steric hindrance maintaining active site isolation. Nonprecious Fe-SPc is promising as a potential alternative ORR electrocatalyst for PEMFCs.

  17. In vivo cell biology of cancer cells visualized with fluorescent proteins.

    Science.gov (United States)

    Hoffman, Robert M

    2005-01-01

    This chapter describes a new cell biology where the behavior of individual cells can be visualized in the living animal. Previously it has been demonstrated that fluorescent proteins can be used for whole-body imaging of metastatic tumor growth, bacterial infection, and gene expression. An example of the new cell biology is dual-color fluorescence imaging using red fluorescent protein (RFP)-expressing tumors transplanted in green fluorescent protein (GFP)-expressing transgenic mice. These models show with great clarity the details of tumor-stroma interactions and especially tumor-induced angiogenesis, tumor-infiltrating lymphocytes, stromal fibroblasts, and macrophages. Another example is the color coding of cells with RFP or GFP such that both cell types can be simultaneously visualized in vivo. Stem cells can also be visualized and tracked in vivo. Mice in which the regulatory elements of the stem cell marker nestin drive GFP expression enable nascent vasculature to be visualized interacting with transplanted RFP-expressing cancer cells. Nestin-driven GFP expression can also be used to visualize hair follicle stem cells. Dual-color cells expressing GFP in the nucleus and RFP in the cytoplasm enable real-time visualization of nuclear-cytoplasm dynamics including cell cycle events and apoptosis. Highly elongated cancer cells in capillaries in living mice were observed within skin flaps. The migration velocities of the cancer cells in the capillaries were measured by capturing images of the dual-color fluorescent cells over time. The cells in the capillaries elongated to fit the width of these vessels. The use of the dual-color cancer cells differentially labeled in the cytoplasm and nucleus and associated fluorescent imaging provide a powerful tool to understand the mechanism of cancer cell migration and deformation in small vessels.

  18. iBET: Immersive visualization of biological electron-transfer dynamics.

    Science.gov (United States)

    Nakano, C Masato; Moen, Erick; Byun, Hye Suk; Ma, Heng; Newman, Bradley; McDowell, Alexander; Wei, Tao; El-Naggar, Mohamed Y

    2016-04-01

    Recently, we presented a computational framework named VizBET to simulate and visualize biological electron-transfer (ET) dynamics. The visualization process was encapsulated as a plugin to the Visual Molecular Dynamics (VMD) software. However, the user's ability to understand complex, multidimensional ET pathways was severely limited when visualized in 2D on traditional computer monitors. To provide a more accurate representation with enhanced depth perception, we here present an extension of VizBET named iBET to render the VMD model of ET dynamics in a commodity virtual reality (VR) platform. The paper describes detailed procedures to export VMD models into the Unity game engine and render it in an Oculus Rift head mounted display. With the increasing availability of low-cost VR systems like the Rift and rich programmability of game engines, the iBET framework provides a powerful means to explore and understand not only biological ET processes but also a unique experiential tool for broad scientific communities.

  19. The Molecular Biology Toolkit (MBT: a modular platform for developing molecular visualization applications

    Directory of Open Access Journals (Sweden)

    Zhang Qing

    2005-02-01

    Full Text Available Abstract Background The large amount of data that are currently produced in the biological sciences can no longer be explored and visualized efficiently with traditional, specialized software. Instead, new capabilities are needed that offer flexibility, rapid application development and deployment as standalone applications or available through the Web. Results We describe a new software toolkit – the Molecular Biology Toolkit (MBT; http://mbt.sdsc.edu – that enables fast development of applications for protein analysis and visualization. The toolkit is written in Java, thus offering platform-independence and Internet delivery capabilities. Several applications of the toolkit are introduced to illustrate the functionality that can be achieved. Conclusions The MBT provides a well-organized assortment of core classes that provide a uniform data model for the description of biological structures and automate most common tasks associated with the development of applications in the molecular sciences (data loading, derivation of typical structural information, visualization of sequence and standard structural entities.

  20. SU-E-J-62: Breath Hold for Left-Sided Breast Cancer: Visually Monitored Deep Inspiration Breath Hold Amplitude Evaluated Using Real-Time Position Management

    Energy Technology Data Exchange (ETDEWEB)

    Conroy, L; Quirk, S; Smith, WL [The University of Calgary, Calgary, AB (Canada); Tom Baker Cancer Centre, Calgary, AB (Canada); Yeung, R; Phan, T [The University of Calgary, Calgary, AB (Canada); Hudson, A [Tom Baker Cancer Centre, Calgary, AB (Canada)

    2015-06-15

    Purpose: We used Real-Time Position Management (RPM) to evaluate breath hold amplitude and variability when gating with a visually monitored deep inspiration breath hold technique (VM-DIBH) with retrospective cine image chest wall position verification. Methods: Ten patients with left-sided breast cancer were treated using VM-DIBH. Respiratory motion was passively collected once weekly using RPM with the marker block positioned at the xiphoid process. Cine images on the tangent medial field were acquired on fractions with RPM monitoring for retrospective verification of chest wall position during breath hold. The amplitude and duration of all breath holds on which treatment beams were delivered were extracted from the RPM traces. Breath hold position coverage was evaluated for symmetric RPM gating windows from ± 1 to 5 mm centered on the average breath hold amplitude of the first measured fraction as a baseline. Results: The average (range) breath hold amplitude and duration was 18 mm (3–36 mm) and 19 s (7–34 s). The average (range) of amplitude standard deviation per patient over all breath holds was 2.7 mm (1.2–5.7 mm). With the largest allowable RPM gating window (± 5 mm), 4 of 10 VM-DIBH patients would have had ≥ 10% of their breath hold positions excluded by RPM. Cine verification of the chest wall position during the medial tangent field showed that the chest wall was greater than 5 mm from the baseline in only 1 out of 4 excluded patients. Cine images verify the chest wall/breast position only, whether this variation is acceptable in terms of heart sparing is a subject of future investigation. Conclusion: VM-DIBH allows for greater breath hold amplitude variability than using a 5 mm gating window with RPM, while maintaining chest wall positioning accuracy within 5 mm for the majority of patients.

  1. Biomimetic bio-inspired biomorph sustainable? An attempt to classify and clarify biology-derived technical developments.

    Science.gov (United States)

    Speck, Olga; Speck, David; Horn, Rafael; Gantner, Johannes; Sedlbauer, Klaus Peter

    2017-01-24

    Over the last few decades, the systematic approach of knowledge transfer from biological concept generators to technical applications has received increasing attention, particularly because marketable bio-derived developments are often described as sustainable. The objective of this paper is to rationalize and refine the discussion about bio-derived developments also with respect to sustainability by taking descriptive, normative and emotional aspects into consideration. In the framework of supervised learning, a dataset of 70 biology-derived and technology-derived developments characterised by 9 different attributes together with their respective values and assigned to one of 17 classes was created. On the basis of the dataset a decision tree was generated which can be used as a straightforward classification tool to identify biology-derived and technology-derived developments. The validation of the applied learning procedure achieved an average accuracy of 90.0%. Additional extraordinary qualities of technical applications are generally discussed by means of selected biology-derived and technology-derived examples with reference to normative (contribution to sustainability) and emotional aspects (aesthetics and symbolic character). In the context of a case study from the building sector, all aspects are critically discussed.

  2. Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways.

    Directory of Open Access Journals (Sweden)

    Zachary A King

    2015-08-01

    Full Text Available Escher is a web application for visualizing data on biological pathways. Three key features make Escher a uniquely effective tool for pathway visualization. First, users can rapidly design new pathway maps. Escher provides pathway suggestions based on user data and genome-scale models, so users can draw pathways in a semi-automated way. Second, users can visualize data related to genes or proteins on the associated reactions and pathways, using rules that define which enzymes catalyze each reaction. Thus, users can identify trends in common genomic data types (e.g. RNA-Seq, proteomics, ChIP--in conjunction with metabolite- and reaction-oriented data types (e.g. metabolomics, fluxomics. Third, Escher harnesses the strengths of web technologies (SVG, D3, developer tools so that visualizations can be rapidly adapted, extended, shared, and embedded. This paper provides examples of each of these features and explains how the development approach used for Escher can be used to guide the development of future visualization tools.

  3. Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways.

    Science.gov (United States)

    King, Zachary A; Dräger, Andreas; Ebrahim, Ali; Sonnenschein, Nikolaus; Lewis, Nathan E; Palsson, Bernhard O

    2015-08-01

    Escher is a web application for visualizing data on biological pathways. Three key features make Escher a uniquely effective tool for pathway visualization. First, users can rapidly design new pathway maps. Escher provides pathway suggestions based on user data and genome-scale models, so users can draw pathways in a semi-automated way. Second, users can visualize data related to genes or proteins on the associated reactions and pathways, using rules that define which enzymes catalyze each reaction. Thus, users can identify trends in common genomic data types (e.g. RNA-Seq, proteomics, ChIP)--in conjunction with metabolite- and reaction-oriented data types (e.g. metabolomics, fluxomics). Third, Escher harnesses the strengths of web technologies (SVG, D3, developer tools) so that visualizations can be rapidly adapted, extended, shared, and embedded. This paper provides examples of each of these features and explains how the development approach used for Escher can be used to guide the development of future visualization tools.

  4. A Reconfigurable and Biologically Inspired Paradigm for Computation Using Network-On-Chip and Spiking Neural Networks

    Directory of Open Access Journals (Sweden)

    Jim Harkin

    2009-01-01

    Full Text Available FPGA devices have emerged as a popular platform for the rapid prototyping of biological Spiking Neural Networks (SNNs applications, offering the key requirement of reconfigurability. However, FPGAs do not efficiently realise the biologically plausible neuron and synaptic models of SNNs, and current FPGA routing structures cannot accommodate the high levels of interneuron connectivity inherent in complex SNNs. This paper highlights and discusses the current challenges of implementing scalable SNNs on reconfigurable FPGAs. The paper proposes a novel field programmable neural network architecture (EMBRACE, incorporating low-power analogue spiking neurons, interconnected using a Network-on-Chip architecture. Results on the evaluation of the EMBRACE architecture using the XOR benchmark problem are presented, and the performance of the architecture is discussed. The paper also discusses the adaptability of the EMBRACE architecture in supporting fault tolerant computing.

  5. VisANT: an online visualization and analysis tool for biological interaction data

    Directory of Open Access Journals (Sweden)

    DeLisi Charles

    2004-02-01

    Full Text Available Abstract Background New techniques for determining relationships between biomolecules of all types – genes, proteins, noncoding DNA, metabolites and small molecules – are now making a substantial contribution to the widely discussed explosion of facts about the cell. The data generated by these techniques promote a picture of the cell as an interconnected information network, with molecular components linked with one another in topologies that can encode and represent many features of cellular function. This networked view of biology brings the potential for systematic understanding of living molecular systems. Results We present VisANT, an application for integrating biomolecular interaction data into a cohesive, graphical interface. This software features a multi-tiered architecture for data flexibility, separating back-end modules for data retrieval from a front-end visualization and analysis package. VisANT is a freely available, open-source tool for researchers, and offers an online interface for a large range of published data sets on biomolecular interactions, including those entered by users. This system is integrated with standard databases for organized annotation, including GenBank, KEGG and SwissProt. VisANT is a Java-based, platform-independent tool suitable for a wide range of biological applications, including studies of pathways, gene regulation and systems biology. Conclusion VisANT has been developed to provide interactive visual mining of biological interaction data sets. The new software provides a general tool for mining and visualizing such data in the context of sequence, pathway, structure, and associated annotations. Interaction and predicted association data can be combined, overlaid, manipulated and analyzed using a variety of built-in functions. VisANT is available at http://visant.bu.edu.

  6. Linking Automated Data Analysis and Visualization with Applications in Developmental Biology and High-Energy Physics

    Energy Technology Data Exchange (ETDEWEB)

    Ruebel, Oliver [Technical Univ. of Darmstadt (Germany)

    2009-11-20

    Knowledge discovery from large and complex collections of today's scientific datasets is a challenging task. With the ability to measure and simulate more processes at increasingly finer spatial and temporal scales, the increasing number of data dimensions and data objects is presenting tremendous challenges for data analysis and effective data exploration methods and tools. Researchers are overwhelmed with data and standard tools are often insufficient to enable effective data analysis and knowledge discovery. The main objective of this thesis is to provide important new capabilities to accelerate scientific knowledge discovery form large, complex, and multivariate scientific data. The research covered in this thesis addresses these scientific challenges using a combination of scientific visualization, information visualization, automated data analysis, and other enabling technologies, such as efficient data management. The effectiveness of the proposed analysis methods is demonstrated via applications in two distinct scientific research fields, namely developmental biology and high-energy physics.Advances in microscopy, image analysis, and embryo registration enable for the first time measurement of gene expression at cellular resolution for entire organisms. Analysis of high-dimensional spatial gene expression datasets is a challenging task. By integrating data clustering and visualization, analysis of complex, time-varying, spatial gene expression patterns and their formation becomes possible. The analysis framework MATLAB and the visualization have been integrated, making advanced analysis tools accessible to biologist and enabling bioinformatic researchers to directly integrate their analysis with the visualization. Laser wakefield particle accelerators (LWFAs) promise to be a new compact source of high-energy particles and radiation, with wide applications ranging from medicine to physics. To gain insight into the complex physical processes of particle

  7. Visual gravity cues in the interpretation of biological movements: neural correlates in humans.

    Science.gov (United States)

    Maffei, Vincenzo; Indovina, Iole; Macaluso, Emiliano; Ivanenko, Yuri P; A Orban, Guy; Lacquaniti, Francesco

    2015-01-01

    Our visual system takes into account the effects of Earth gravity to interpret biological motion (BM), but the neural substrates of this process remain unclear. Here we measured functional magnetic resonance (fMRI) signals while participants viewed intact or scrambled stick-figure animations of walking, running, hopping, and skipping recorded at normal or reduced gravity. We found that regions sensitive to BM configuration in the occipito-temporal cortex (OTC) were more active for reduced than normal gravity but with intact stimuli only. Effective connectivity analysis suggests that predictive coding of gravity effects underlies BM interpretation. This process might be implemented by a family of snapshot neurons involved in action monitoring.

  8. ChemProt-2.0: visual navigation in a disease chemical biology database

    DEFF Research Database (Denmark)

    Kjærulff, Sonny Kim; Wich, Louis; Kringelum, Jens Vindahl

    2013-01-01

    measurements for 15 290 proteins. Each protein is linked to quality-scored human protein-protein interactions data based on more than half a million interactions, for studying diseases and biological outcomes (diseases, pathways and GO terms) through protein complexes. In ChemProt-2.0, therapeutic effects...... of proteins, which can help in the prediction of off-target effects. Finally, the database was integrated into a visual interface that enables navigation of the pharmacological space for small molecules. Filtering options were included in order to facilitate and to guide dynamic search of specific queries....

  9. Facial expression recognition using biologically inspired features and SVM%基于生物启发特征和SVM的人脸表情识别

    Institute of Scientific and Technical Information of China (English)

    穆国旺; 王阳; 郭蔚

    2014-01-01

    将C1特征应用于静态图像人脸表情识别,提出了一种新的基于生物启发特征和SVM的表情识别算法。提取人脸图像的C1特征,利用PCA+LDA方法对特征进行降维,用SVM进行分类。在JAFFE和Extended Cohn-Kanade(CK+)人脸表情数据库上的实验结果表明,该算法具有较高的识别率,是一种有效的人脸表情识别方法。%C1 features are introduced to facial expression recognition for static images, and a new algorithm for facial expression recognition based on Biologically Inspired Features(BIFs)and SVM is proposed. C1 features of the facial images are extracted, PCA+LDA method is used to reduce the dimensionality of the C1 features, SVM is used for classifi-cation of the expression. The experiments on the JAFFE and Extended Cohn-Kanade(CK+)facial expression data sets show the effectiveness and the good performance of the algorithm.

  10. Visual Literacy Skills of Students in College-Level Biology: Learning Outcomes Following Digital or Hand-Drawing Activities

    Science.gov (United States)

    Bell, Justine C.

    2014-01-01

    To test the claim that digital learning tools enhance the acquisition of visual literacy in this generation of biology students, a learning intervention was carried out with 33 students enrolled in an introductory college biology course. This study compared learning outcomes following two types of learning tools: a traditional drawing activity, or…

  11. Molecular plasma deposition: biologically inspired nanohydroxyapatite coatings on anodized nanotubular titanium for improving osteoblast density

    Directory of Open Access Journals (Sweden)

    Balasundaram G

    2015-01-01

    Full Text Available Ganesan Balasundaram,1 Daniel M Storey,1 Thomas J Webster2,3 1Chameleon Scientific, Longmont, CO, USA; 2Department of Chemical Engineering, Northeastern University, Boston, MA, USA; 3Center of Excellence for Advanced Materials Research, King Abdulaziz University, Jeddah, Saudi Arabia Abstract: In order to begin to prepare a novel orthopedic implant that mimics the natural bone environment, the objective of this in vitro study was to synthesize nanocrystalline hydroxyapatite (NHA and coat it on titanium (Ti using molecular plasma deposition (MPD. NHA was synthesized through a wet chemical process followed by a hydrothermal treatment. NHA and micron sized hydroxyapatite (MHA were prepared by processing NHA coatings at 500°C and 900°C, respectively. The coatings were characterized before and after sintering using scanning electron microscopy, atomic force microscopy, and X-ray diffraction. The results revealed that the post-MPD heat treatment of up to 500°C effectively restored the structural and topographical integrity of NHA. In order to determine the in vitro biological responses of the MPD-coated surfaces, the attachment and spreading of osteoblasts (bone-forming cells on the uncoated, NHA-coated, and MHA-coated anodized Ti were investigated. Most importantly, the NHA-coated substrates supported a larger number of adherent cells than the MHA-coated and uncoated substrates. The morphology of these cells was assessed by scanning electron microscopy and the observed shapes were different for each substrate type. The present results are the first reports using MPD in the framework of hydroxyapatite coatings on Ti to enhance osteoblast responses and encourage further studies on MPD-based hydroxyapatite coatings on Ti for improved orthopedic applications. Keywords: hydroxyapatite, anodization, nanotechnology

  12. 抽象形象与灵感的运作——紫砂素器创新思维的形态表现%Application of Abstract,Visual and Inspirational Thinking in Art Creation

    Institute of Scientific and Technical Information of China (English)

    鲍玉美

    2011-01-01

    Three undecorated novelty-shaped purple clay works are cited to illustrate how creativity was sparked by the principles of abstract thinking,visual thinking and inspirational thinking and how the creative thinking of these kinds was used in their fabrication practice.%遵循抽象思维、形象思维和灵感思维的基本原则和运作规律,论证了创作新颖别致素器作品过程中创新思维的形态表现。

  13. Inspirational Journey

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Artists from across Europe and Asia ventured into the remote Chinese countryside to seek inspiration from the Miao Ethnic group "I’ve never been to Asia before and everything is strange and wonderful:supermarkets and shopping mails,even the air- port seemed exotic!"wrote Ula Sickle,a choreographer from Poland on her blog under the name"chopstick diaries."Ula was one of the 18 foreign and domestic artists participating in a cultural exchange project called the Pointe to Point: Asia-Europe Dance Forum.It aims to empower aspiring young artists from Asia and Europe to reflect upon their views of

  14. Perceptually-Inspired Computing

    Directory of Open Access Journals (Sweden)

    Ming Lin

    2015-08-01

    Full Text Available Human sensory systems allow individuals to see, hear, touch, and interact with the surrounding physical environment. Understanding human perception and its limit enables us to better exploit the psychophysics of human perceptual systems to design more efficient, adaptive algorithms and develop perceptually-inspired computational models. In this talk, I will survey some of recent efforts on perceptually-inspired computing with applications to crowd simulation and multimodal interaction. In particular, I will present data-driven personality modeling based on the results of user studies, example-guided physics-based sound synthesis using auditory perception, as well as perceptually-inspired simplification for multimodal interaction. These perceptually guided principles can be used to accelerating multi-modal interaction and visual computing, thereby creating more natural human-computer interaction and providing more immersive experiences. I will also present their use in interactive applications for entertainment, such as video games, computer animation, and shared social experience. I will conclude by discussing possible future research directions.

  15. 仿复眼视觉系统的研究进展%Research progress on artificial visual system inspired by compound eyes

    Institute of Scientific and Technical Information of China (English)

    邢强; 戴振东; 王浩

    2013-01-01

    Compound eye is one of the most important peripheral sensors in insects,which consists of thousands of ommatidia.The compound eye is characterized as multi-aperture imaging and fast parallel processing,which insures the ability of fast detection and location on obstacles and predators.These characteristics have been widely recognized in several research fields,such as robot visual navigation,obstacle avoidance,machine vision,guided missile.Firstly,the biological mechanism,imaging features,and the existed large field visual system of the compound eyes were introduced; secondly,the different optical systems designed with micro lens array imitation from compound eyes,the panoramic image quality with large field of view and depth field,and the surface micro-lens imaging defects were discussed;finally,the idea of combining the surf and plane micro lens array to achieve a system with large field of view and large depth of field was proposed.Based on the judgment of quality in panoramic images,position estimation of such a system can be achieved in detecting multiple moving targets.%复眼是昆虫重要的光感受器,由成千上万的小眼构成,具有大视野的动目标快速检测能力.仿复眼的多孔径系统在机器人视觉导航、大视角测量和全景成像等领域应用广泛.首先介绍了复眼的生物机理、成像特性及现有的大视场成像系统;其次介绍了微透镜阵列的仿复眼光学设计现状,分析了微透镜阵列的大视角与多景深的全景成像质量,指出目前曲面微透镜一体化制造存在的成像缺陷;最后提出结合曲面与平面微透镜阵列实现大视角、多景深分辨率的仿复眼系统的可行性.该成像系统不仅可以实现全景范围内的清晰成像,而且还具有全景范围内的目标位置估计能力.

  16. Biologically Inspired Self-assembling Synthesis of Bone-like Nano-hydroxyapatite/PLGA- (PEG-ASP)n Composite: A New Biomimetic Bone Tissue Engineering Scaffold Material

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    A new biomimetic bone tissue engineering scaffold material, nano-HA/ PLGA-( PEG- ASP )n composite, was synthesized by a biologically inspired self assembling approach. A novel biodegradable PLGA( PEG-ASP ) n copolymer with pendant amine functional groups and enhanced hydrophilicity was synthesized by bulk ring-opening copolymerization by DL-lactide( DLLA ) and glycolide( GA ) with Aspartic acid ( ASP )-Polyethylene glycol( PEG ) alt-prepolymer. A Three-dimensional, porous scaffold of the PLGA-( PEG-ASP )n copolymer was fabricated by a solvent casting, particulate leaching process. The scaffold was then incubated in modified simulated body fluid ( mSBF ) . Growth of HA nanocrystals on the inner pore surfaces of the porous scaffold is confirmed by calcium ion binding analyses, SEM, mass increase measurements and quantification of phosphate content within scaffolds . SEM analysis demonstrated the nucleation and growth of a continuous bonelike, low crystalline carbonated HA nanocrystals on the inner pore surfawes of the PLGA-( PEG-ASP)n scaffolds. The amount of calcium binding, total mass and the mass of pbosphate on experimental PLGA-( PEG- ASP )n scaffolds at different incubation times in mSBF was significantly greater than that of control PLGA scaffolds . This nano-HA/ PLGA- ( PEG-ASP )n composite shows some features of natural bone both in main composition and hierarchical microstructure. The ASPPEG alt-prepolymer modified PLGA copolymer provide a controllable high surface density and distribution of anionic functional groups which would enhauce nucleation and growth of bonelike mineral following exposure to mSBF. This biomimetic treatment provides a simple method for surface funetionalization and subsequent mineral nucleation and self-assembling on biodegradable polymer scaffolds for tissue engineering.

  17. BIOLOGICALLY INSPIRED HARDWARE CELL ARCHITECTURE

    DEFF Research Database (Denmark)

    2010-01-01

    Disclosed is a system comprising: - a reconfigurable hardware platform; - a plurality of hardware units defined as cells adapted to be programmed to provide self-organization and self-maintenance of the system by means of implementing a program expressed in a programming language defined as DNA...... language, where each cell is adapted to communicate with one or more other cells in the system, and where the system further comprises a converter program adapted to convert keywords from the DNA language to a binary DNA code; where the self-organisation comprises that the DNA code is transmitted to one...... or more of the cells, and each of the one or more cells is adapted to determine its function in the system; where if a fault occurs in a first cell and the first cell ceases to perform its function, self-maintenance is performed by that the system transmits information to the cells that the first cell has...

  18. Biologically Inspired Artificial Haircell Sensors

    Science.gov (United States)

    2008-06-23

    degree at the University of Illinois. James A. Liburdy, J.R. Welty Professor of Mechanical engineering, Oregon State University Daniel R. Morse...patent disclosure None. Honors/Awards James A. Liburdy, promoted to J.R. Welty Professor of Mechanical engineering, Oregon State University

  19. Biologically inspired intelligent decision making

    Science.gov (United States)

    Manning, Timmy; Sleator, Roy D; Walsh, Paul

    2014-01-01

    Artificial neural networks (ANNs) are a class of powerful machine learning models for classification and function approximation which have analogs in nature. An ANN learns to map stimuli to responses through repeated evaluation of exemplars of the mapping. This learning approach results in networks which are recognized for their noise tolerance and ability to generalize meaningful responses for novel stimuli. It is these properties of ANNs which make them appealing for applications to bioinformatics problems where interpretation of data may not always be obvious, and where the domain knowledge required for deductive techniques is incomplete or can cause a combinatorial explosion of rules. In this paper, we provide an introduction to artificial neural network theory and review some interesting recent applications to bioinformatics problems. PMID:24335433

  20. 基于生物刺激神经网络的多机器人编队方法%Multi-robot formation based on biological inspired neural network

    Institute of Scientific and Technical Information of China (English)

    仰晓芳; 倪建军

    2013-01-01

    Multi-robot formation control is an important issue in the multi-robot cooperation field. It is a hot and difficult problem to achieve multi-robot dynamic formation while making them move toward the same target. Concerning this problem, a new biological inspired neural network based approach for multi-robot formation was proposed in this paper. In the proposed approach, a leader-referenced formation model was used to calculate the virtual target location for each robot in real-time, and a biological neural network was used to realize multi-robot navigation. Finally, some simulation experiments were carried out. The experimental results show that the proposed approach has some good performances, such as the real-time obstacle avoidance, keeping formation and moving toward the same target. Furthermore, multi-robots can change the formation quickly, which proves the real-time and intelligence of the proposed approach.%多机器人编队控制是多机器人协作领域的重要研究内容之一,如何实现多机器人朝同一目标移动的同时保持队形是多机器人编队的一个热点和难点问题.针对这一问题,提出一种新的基于生物刺激神经网络的多机器人动态编队方法,采用基于leader-referenced编队模型实时计算各机器人的虚拟目标位置,利用生物刺激神经网络进行机器人导航.最后进行仿真实验,实验结果表明该方法在实现多机器人实时避障并保持队形的同时,朝同一目标移动,而且可以很快实现队形变换,具有较好的实时性和灵活性.

  1. Griffiths phase and long-range correlations in a biologically motivated visual cortex model

    Science.gov (United States)

    Girardi-Schappo, M.; Bortolotto, G. S.; Gonsalves, J. J.; Pinto, L. T.; Tragtenberg, M. H. R.

    2016-07-01

    Activity in the brain propagates as waves of firing neurons, namely avalanches. These waves’ size and duration distributions have been experimentally shown to display a stable power-law profile, long-range correlations and 1/f b power spectrum in vivo and in vitro. We study an avalanching biologically motivated model of mammals visual cortex and find an extended critical-like region – a Griffiths phase – characterized by divergent susceptibility and zero order parameter. This phase lies close to the expected experimental value of the excitatory postsynaptic potential in the cortex suggesting that critical be-havior may be found in the visual system. Avalanches are not perfectly power-law distributed, but it is possible to collapse the distributions and define a cutoff avalanche size that diverges as the network size is increased inside the critical region. The avalanches present long-range correlations and 1/f b power spectrum, matching experiments. The phase transition is analytically determined by a mean-field approximation.

  2. Development of an autonomous biological cell manipulator with single-cell electroporation and visual servoing capabilities.

    Science.gov (United States)

    Sakaki, Kelly; Dechev, Nikolai; Burke, Robert D; Park, Edward J

    2009-08-01

    Studies of single cells via microscopy and microinjection are a key component in research on gene functions, cancer, stem cells, and reproductive technology. As biomedical experiments become more complex, there is an urgent need to use robotic systems to improve cell manipulation and microinjection processes. Automation of these tasks using machine vision and visual servoing creates significant benefits for biomedical laboratories, including repeatability of experiments, higher throughput, and improved cell viability. This paper presents the development of a new 5-DOF robotic manipulator, designed for manipulating and microinjecting single cells. This biological cell manipulator (BCM) is capable of autonomous scanning of a cell culture followed by autonomous injection of cells using single-cell electroporation (SCE). SCE does not require piercing the cell membrane, thereby keeping the cell membrane fully intact. The BCM features high-precision 3-DOF translational and 2-DOF rotational motion, and a second z-axis allowing top-down placement of a micropipette tip onto the cell membrane for SCE. As a technical demonstration, the autonomous visual servoing and microinjection capabilities of the single-cell manipulator are experimentally shown using sea urchin eggs.

  3. Expanding biological data standards development processes for US IOOS: visual line transect observing community for mammal, bird, and turtle data

    Science.gov (United States)

    Fornwall, M.; Gisiner, R.; Simmons, S. E.; Moustahfid, Hassan; Canonico, G.; Halpin, P.; Goldstein, P.; Fitch, R.; Weise, M.; Cyr, N.; Palka, D.; Price, J.; Collins, D.

    2012-01-01

    The US Integrated Ocean Observing System (IOOS) has recently adopted standards for biological core variables in collaboration with the US Geological Survey/Ocean Biogeographic Information System (USGS/OBIS-USA) and other federal and non-federal partners. In this Community White Paper (CWP) we provide a process to bring into IOOS a rich new source of biological observing data, visual line transect surveys, and to establish quality data standards for visual line transect observations, an important source of at-sea bird, turtle and marine mammal observation data. The processes developed through this exercise will be useful for other similar biogeographic observing efforts, such as passive acoustic point and line transect observations, tagged animal data, and mark-recapture (photo-identification) methods. Furthermore, we suggest that the processes developed through this exercise will serve as a catalyst for broadening involvement by the larger marine biological data community within the goals and processes of IOOS.

  4. ArrayXPath: mapping and visualizing microarray gene-expression data with integrated biological pathway resources using Scalable Vector Graphics.

    Science.gov (United States)

    Chung, Hee-Joon; Kim, Mingoo; Park, Chan Hee; Kim, Jihoon; Kim, Ju Han

    2004-07-01

    Biological pathways can provide key information on the organization of biological systems. ArrayXPath (http://www.snubi.org/software/ArrayXPath/) is a web-based service for mapping and visualizing microarray gene-expression data for integrated biological pathway resources using Scalable Vector Graphics (SVG). By integrating major bio-databases and searching pathway resources, ArrayXPath automatically maps different types of identifiers from microarray probes and pathway elements. When one inputs gene-expression clusters, ArrayXPath produces a list of the best matching pathways for each cluster. We applied Fisher's exact test and the false discovery rate (FDR) to evaluate the statistical significance of the association between a cluster and a pathway while correcting the multiple-comparison problem. ArrayXPath produces Javascript-enabled SVGs for web-enabled interactive visualization of pathways integrated with gene-expression profiles.

  5. Ways of incorporating photographic images in learning and assessing high school biology: A study of visual perception and visual cognition

    Science.gov (United States)

    Nixon, Brenda Chaumont

    This study evaluated the cognitive benefits and costs of incorporating biology-textbook and student-generated photographic images into the learning and assessment processes within a 10th grade biology classroom. The study implemented Wandersee's (2000) 20-Q Model of Image-Based Biology Test-Item Design (20-Q Model) to explore the use of photographic images to assess students' understanding of complex biological processes. A thorough review of the students' textbook using ScaleMaster R with PC Interface was also conducted. The photographs, diagrams, and other representations found in the textbook were measured to determine the percentage of each graphic depicted in the book and comparisons were made to the text. The theoretical framework that guided the research included Human Constructivist tenets espoused by Mintzes, Wandersee and Novak (2000). Physiological and cognitive factors of images and image-based learning as described by Robin (1992), Solso (1997) and Wandersee (2000) were examined. Qualitative case study design presented by Yin (1994), Denzin and Lincoln (1994) was applied and data were collected through interviews, observations, student activities, student and school artifacts and Scale Master IIRTM measurements. The results of the study indicate that although 24% of the high school biology textbook is devoted to photographic images which contribute significantly to textbook cost, the teacher and students paid little attention to photographic images other than as aesthetic elements for creating biological ambiance, wasting valuable opportunities for learning. The analysis of the photographs corroborated findings published by the Association American Association for the Advancement of Science that indicated "While most of the books are lavishly illustrated, these representations are rarely helpful, because they are too abstract, needlessly complicated, or inadequately explained" (Roseman, 2000, p. 2). The findings also indicate that applying the 20-Q

  6. The effects of a visualization-centered curriculum on conceptual understanding and representational competence in high school biology

    Science.gov (United States)

    Wilder, Anna

    The purpose of this study was to investigate the effects of a visualization-centered curriculum, Hemoglobin: A Case of Double Identity, on conceptual understanding and representational competence in high school biology. Sixty-nine students enrolled in three sections of freshman biology taught by the same teacher participated in this study. Online Chemscape Chime computer-based molecular visualizations were incorporated into the 10-week curriculum to introduce students to fundamental structure and function relationships. Measures used in this study included a Hemoglobin Structure and Function Test, Mental Imagery Questionnaire, Exam Difficulty Survey, the Student Assessment of Learning Gains, the Group Assessment of Logical Thinking, the Attitude Toward Science in School Assessment, audiotapes of student interviews, students' artifacts, weekly unit activity surveys, informal researcher observations and a teacher's weekly questionnaire. The Hemoglobin Structure and Function Test, consisting of Parts A and B, was administered as a pre and posttest. Part A used exclusively verbal test items to measure conceptual understanding, while Part B used visual-verbal test items to measure conceptual understanding and representational competence. Results of the Hemoglobin Structure and Function pre and posttest revealed statistically significant gains in conceptual understanding and representational competence, suggesting the visualization-centered curriculum implemented in this study was effective in supporting positive learning outcomes. The large positive correlation between posttest results on Part A, comprised of all-verbal test items, and Part B, using visual-verbal test items, suggests this curriculum supported students' mutual development of conceptual understanding and representational competence. Evidence based on student interviews, Student Assessment of Learning Gains ratings and weekly activity surveys indicated positive attitudes toward the use of Chemscape Chime

  7. Visualization of Complex Biological Systems: An Immune Response Model Using OpenGL

    Science.gov (United States)

    Burns, John; Ruskin, Heather J.; Perrin, Dimitri; Walsh, John

    In this paper we present an update on our novel visualization technologies based on cellular immune interaction from both large-scale spatial and temporal perspectives. We do so with a primary motive: to present a visually and behaviourally realistic environment to the community of experimental biologists and physicians such that their knowledge and expertise may be more readily integrated into the model creation and calibration process. Visualization aids understanding as we rely on visual perception to make crucial decisions. For example, with our initial model, we can visualize the dynamics of an idealized lymphatic compartment, with antigen presenting cells (APC) and cytotoxic T lymphocyte (CTL) cells. The visualization technology presented here offers the researcher the ability to start, pause, zoom-in, zoom-out and navigate in 3-dimensions through an idealised lymphatic compartment.

  8. Lighten the Load: Scaffolding Visual Literacy in Biochemistry and Molecular Biology

    Science.gov (United States)

    Offerdahl, Erika G.; Arneson, Jessie B.; Byrne, Nicholas

    2017-01-01

    The development of scientific visual literacy has been identified as critical to the training of tomorrow’s scientists and citizens alike. Within the context of the molecular life sciences in particular, visual representations frequently incorporate various components, such as discipline-specific graphical and diagrammatic features, varied levels of abstraction, and spatial arrangements of visual elements to convey information. Visual literacy is achieved when an individual understands the various ways in which a discipline uses these components to represent a particular way of knowing. Owing to the complex nature of visual representations, the activities through which visual literacy is developed have high cognitive load. Cognitive load can be reduced by first helping students to become fluent with the discrete components of visual representations before asking them to simultaneously integrate these components to extract the intended meaning of a representation. We present a taxonomy for characterizing one component of visual representations—the level of abstraction—as a first step in understanding the opportunities afforded students to develop fluency. Further, we demonstrate how our taxonomy can be used to analyze course assessments and spur discussions regarding the extent to which the development of visual literacy skills is supported by instruction within an undergraduate biochemistry curriculum. PMID:28130273

  9. Lighten the Load: Scaffolding Visual Literacy in Biochemistry and Molecular Biology

    Science.gov (United States)

    Offerdahl, Erika G.; Arneson, Jessie B.; Byrne, Nicholas

    2017-01-01

    The development of scientific visual literacy has been identified as critical to the training of tomorrow's scientists and citizens alike. Within the context of the molecular life sciences in particular, visual representations frequently incorporate various components, such as discipline-specific graphical and diagrammatic features, varied levels…

  10. Visual Representations on High School Biology, Chemistry, Earth Science, and Physics Assessments

    Science.gov (United States)

    LaDue, Nicole D.; Libarkin, Julie C.; Thomas, Stephen R.

    2015-01-01

    The pervasive use of visual representations in textbooks, curricula, and assessments underscores their importance in K-12 science education. For example, visual representations figure prominently in the recent publication of the Next Generation Science Standards (NGSS Lead States in Next generation science standards: for states, by states.…

  11. Learning from nature: Nature-inspired algorithms

    DEFF Research Database (Denmark)

    Albeanu, Grigore; Madsen, Henrik; Popentiu-Vladicescu, Florin

    2016-01-01

    During last decade, the nature has inspired researchers to develop new algorithms. The largest collection of nature-inspired algorithms is biology-inspired: swarm intelligence (particle swarm optimization, ant colony optimization, cuckoo search, bees' algorithm, bat algorithm, firefly algorithm etc...... on collective social behaviour of organisms, researchers have developed optimization strategies taking into account not only the individuals, but also groups and environment. However, learning from nature, new classes of approaches can be identified, tested and compared against already available algorithms....... This work reviews the most effective nature-inspired algorithms and describes learning strategies based on nature oriented thinking. Examples and the benefits obtained from applying nature-inspired strategies in test generation, learners group optimization, and artificial immune systems for learning...

  12. Effect of 1% Inspired CO2 During Head-Down Tilt on Ocular Structures, Cerebral Blood Flow, and Visual Acuity in Healthy Human Subjects

    Science.gov (United States)

    Laurie, S. S.; Hu, X.; Lee, S. M. C.; Martin, D. S.; Phillips, T. R.; Ploutz-Snyder, R.; Smith, S. M.; Stenger, M. B.; Taibbi, G.; Zwart, S. R.; Vizzeri, G.

    2016-01-01

    The cephalad fluid shift induced by microgravity has been hypothesized to elevate intracranial pressure (ICP) and contribute to the development of the visual impairment/intracranial pressure (VIIP) syndrome experienced by many astronauts during and after long-duration space flight. In addition, elevated ambient partial pressure of carbon dioxide (PCO2) on the International Space Station (ISS) has also been hypothesized to contribute to the development of VIIP. We seek to determine if an acute, mild CO2 exposure, similar to that occurring on the ISS, combined with the cephalad fluid shift induced by head-down tilt will induce ophthalmic and ICP changes consistent with the VIIP syndrome.

  13. RBioplot: an easy-to-use R pipeline for automated statistical analysis and data visualization in molecular biology and biochemistry

    Directory of Open Access Journals (Sweden)

    Jing Zhang

    2016-09-01

    Full Text Available Background Statistical analysis and data visualization are two crucial aspects in molecular biology and biology. For analyses that compare one dependent variable between standard (e.g., control and one or multiple independent variables, a comprehensive yet highly streamlined solution is valuable. The computer programming language R is a popular platform for researchers to develop tools that are tailored specifically for their research needs. Here we present an R package RBioplot that takes raw input data for automated statistical analysis and plotting, highly compatible with various molecular biology and biochemistry lab techniques, such as, but not limited to, western blotting, PCR, and enzyme activity assays. Method The package is built based on workflows operating on a simple raw data layout, with minimum user input or data manipulation required. The package is distributed through GitHub, which can be easily installed through one single-line R command. A detailed installation guide is available at http://kenstoreylab.com/?page_id=2448. Users can also download demo datasets from the same website. Results and Discussion By integrating selected functions from existing statistical and data visualization packages with extensive customization, RBioplot features both statistical analysis and data visualization functionalities. Key properties of RBioplot include: -Fully automated and comprehensive statistical analysis, including normality test, equal variance test, Student’s t-test and ANOVA (with post-hoc tests; -Fully automated histogram, heatmap and joint-point curve plotting modules; -Detailed output files for statistical analysis, data manipulation and high quality graphs; -Axis range finding and user customizable tick settings; -High user-customizability.

  14. RBioplot: an easy-to-use R pipeline for automated statistical analysis and data visualization in molecular biology and biochemistry

    Science.gov (United States)

    Zhang, Jing

    2016-01-01

    Background Statistical analysis and data visualization are two crucial aspects in molecular biology and biology. For analyses that compare one dependent variable between standard (e.g., control) and one or multiple independent variables, a comprehensive yet highly streamlined solution is valuable. The computer programming language R is a popular platform for researchers to develop tools that are tailored specifically for their research needs. Here we present an R package RBioplot that takes raw input data for automated statistical analysis and plotting, highly compatible with various molecular biology and biochemistry lab techniques, such as, but not limited to, western blotting, PCR, and enzyme activity assays. Method The package is built based on workflows operating on a simple raw data layout, with minimum user input or data manipulation required. The package is distributed through GitHub, which can be easily installed through one single-line R command. A detailed installation guide is available at http://kenstoreylab.com/?page_id=2448. Users can also download demo datasets from the same website. Results and Discussion By integrating selected functions from existing statistical and data visualization packages with extensive customization, RBioplot features both statistical analysis and data visualization functionalities. Key properties of RBioplot include: -Fully automated and comprehensive statistical analysis, including normality test, equal variance test, Student’s t-test and ANOVA (with post-hoc tests);-Fully automated histogram, heatmap and joint-point curve plotting modules;-Detailed output files for statistical analysis, data manipulation and high quality graphs;-Axis range finding and user customizable tick settings;-High user-customizability. PMID:27703842

  15. A Theory of the Visual System Biology Underlying Development of Spatial Frequency Lateralization

    Science.gov (United States)

    Howard, Mary F.; Reggia, James A.

    2007-01-01

    The spatial frequency hypothesis contends that performance differences between the hemispheres on various visuospatial tasks are attributable to lateralized processing of the spatial frequency content of visual stimuli. Hellige has proposed that such lateralization could arise during infant development from the earlier maturation of the right…

  16. Nature-inspired computing for control systems

    CERN Document Server

    2016-01-01

    The book presents recent advances in nature-inspired computing, giving a special emphasis to control systems applications. It reviews different techniques used for simulating physical, chemical, biological or social phenomena at the purpose of designing robust, predictive and adaptive control strategies. The book is a collection of several contributions, covering either more general approaches in control systems, or methodologies for control tuning and adaptive controllers, as well as exciting applications of nature-inspired techniques in robotics. On one side, the book is expected to motivate readers with a background in conventional control systems to try out these powerful techniques inspired by nature. On the other side, the book provides advanced readers with a deeper understanding of the field and a broad spectrum of different methods and techniques. All in all, the book is an outstanding, practice-oriented reference guide to nature-inspired computing addressing graduate students, researchers and practi...

  17. (HBCU) Development and Application of a Biologically Inspired Methodology for the Optimized, Multi-Disciplinary and Multi-Objective Design of Air Vehicles

    Science.gov (United States)

    2013-05-01

    Approach to Modeling Morphogenesis Using Control Theory” Sao Paulo Journal of Mathematical Sciences (5) 281315. (b) N. Y. Kawabata , M.Sc., University of...Summer 2010, advisor: M.H. Kobayashi. Dissertation available from UHM library. 4. N. Y. Kawabata , M.Sc., University of Hawaii at Manoa, “A Biologically

  18. Clay Bells: Edo Inspiration

    Science.gov (United States)

    Wagner, Tom

    2010-01-01

    The ceremonial copper and iron bells at the Smithsonian's National Museum of African Art were the author's inspiration for an interdisciplinary unit with a focus on the contributions various cultures make toward the richness of a community. The author of this article describes an Edo bell-inspired ceramic project incorporating slab-building…

  19. A biologically plausible transform for visual recognition that is invariant to translation, scale and rotation

    Directory of Open Access Journals (Sweden)

    Pavel eSountsov

    2011-11-01

    Full Text Available Visual object recognition occurs easily despite differences in position, size, and rotation of the object, but the neural mechanisms responsible for this invariance are not known. We have found a set of transforms that achieve invariance in a neurally plausible way. We find that a transform based on local spatial frequency analysis of oriented segments and on logarithmic mapping, when applied twice in an iterative fashion, produces an output image that is unique to the object and that remains constant as the input image is shifted, scaled or rotated.

  20. A novel 3D wavelet based filter for visualizing features in noisy biological data

    Energy Technology Data Exchange (ETDEWEB)

    Moss, W C; Haase, S; Lyle, J M; Agard, D A; Sedat, J W

    2005-01-05

    We have developed a 3D wavelet-based filter for visualizing structural features in volumetric data. The only variable parameter is a characteristic linear size of the feature of interest. The filtered output contains only those regions that are correlated with the characteristic size, thus denoising the image. We demonstrate the use of the filter by applying it to 3D data from a variety of electron microscopy samples including low contrast vitreous ice cryogenic preparations, as well as 3D optical microscopy specimens.

  1. An introduction to bio-inspired artificial neural network architectures.

    Science.gov (United States)

    Fasel, B

    2003-03-01

    In this introduction to artificial neural networks we attempt to give an overview of the most important types of neural networks employed in engineering and explain shortly how they operate and also how they relate to biological neural networks. The focus will mainly be on bio-inspired artificial neural network architectures and specifically to neo-perceptions. The latter belong to the family of convolutional neural networks. Their topology is somewhat similar to the one of the human visual cortex and they are based on receptive fields that allow, in combination with sub-sampling layers, for an improved robustness with regard to local spatial distortions. We demonstrate the application of artificial neural networks to face analysis--a domain we human beings are particularly good at, yet which poses great difficulties for digital computers running deterministic software programs.

  2. Visual Literacy Skills of Students in College-Level Biology: Learning Outcomes following Digital or Hand-Drawing Activities

    Directory of Open Access Journals (Sweden)

    Justine C. Bell

    2014-11-01

    Full Text Available To test the claim that digital learning tools enhance the acquisition of visual literacy in this generation of biology students, a learning intervention was carried out with 33 students enrolled in an introductory college biology course. This study compared learning outcomes following two types of learning tools: a traditional drawing activity, or a learning activity on a computer. The sample was divided into two random groups. In the first intervention students learned how to draw and label a cell. Group 1 learned the material by computer and Group 2 learned the material by hand drawing. In the second intervention, students learned how to draw the phases of mitosis, and the two groups were inverted. After each learning activity, students were given a quiz, and were also asked to self-evaluate their performance in an attempt to measure their level of metacognition. At the end of the study, participants were asked to fill out a questionnaire that was used to measure the level of task engagement the students felt towards the two types of learning activities. The students who learned the material by drawing had a significantly higher average grade on the associated quiz compared to that of those who learned the material by computer. There were no other significant differences in learning outcomes between the two groups. This study provides evidence that drawing by hand is beneficial for learning biological images compared to learning the same material on a computer.

  3. Bio-Inspired Principles Applied to the Guidance, Navigation and Control of UAS

    Directory of Open Access Journals (Sweden)

    Reuben Strydom

    2016-07-01

    Full Text Available This review describes a number of biologically inspired principles that have been applied to the visual guidance, navigation and control of Unmanned Aerial System (UAS. The current limitations of UAS systems are outlined, such as the over-reliance on GPS, the requirement for more self-reliant systems and the need for UAS to have a greater understanding of their environment. It is evident that insects, even with their small brains and limited intelligence, have overcome many of the shortcomings of the current state of the art in autonomous aerial guidance. This has motivated research into bio-inspired systems and algorithms, specifically vision-based navigation, situational awareness and guidance.

  4. In Vivo Bioluminescent Imaging (BLI): Noninvasive Visualization and Interrogation of Biological Processes in Living Animals

    OpenAIRE

    Steven Ripp; Sayler, Gary S.; Tingting Xu; Close, Dan M.

    2010-01-01

    In vivo bioluminescent imaging (BLI) is increasingly being utilized as a method for modern biological research. This process, which involves the noninvasive interrogation of living animals using light emitted from luciferase-expressing bioreporter cells, has been applied to study a wide range of biomolecular functions such as gene function, drug discovery and development, cellular trafficking, protein-protein interactions, and especially tumorigenesis, cancer treatment, and disease progressio...

  5. Cerebral: visualizing multiple experimental conditions on a graph with biological context.

    Science.gov (United States)

    Barsky, Aaron; Munzner, Tamara; Gardy, Jennifer; Kincaid, Robert

    2008-01-01

    Systems biologists use interaction graphs to model the behavior of biological systems at the molecular level. In an iterative process, such biologists observe the reactions of living cells under various experimental conditions, view the results in the context of the interaction graph, and then propose changes to the graph model. These graphs ser ve as a form of dynamic knowledge representation of the biological system being studied and evolve as new insight is gained from the experimental data. While numerous graph layout and drawing packages are available, these tools did not fully meet the needs of our immunologist collaborators. In this paper, we describe the data information display needs of these immunologists and translate them into design decisions. These decisions led us to create Cerebral, a system that uses a biologically guided graph layout and incorporates experimental data directly into the graph display. Small multiple views of different experimental conditions and a data-driven parallel coordinates view enable correlations between experimental conditions to be analyzed at the same time that the data is viewed in the graph context. This combination of coordinated views allows the biologist to view the data from many different perspectives simultaneously. To illustrate the typical analysis tasks performed, we analyze two datasets using Cerebral. Based on feedback from our collaborators we conclude that Cerebral is a valuable tool for analyzing experimental data in the context of an interaction graph model.

  6. Physicists get INSPIREd

    CERN Multimedia

    CERN Bulletin

    2010-01-01

    Particle physicists thrive on information. They first create information by performing experiments or elaborating theoretical conjectures and then they share it through publications and various web tools. The INSPIRE service, just released, will bring state of the art information retrieval to the fingertips of researchers.   Keeping track of the information shared within the particle physics community has long been the task of libraries at the larger labs, such as CERN, DESY, Fermilab and SLAC, as well as the focus of indispensible services like arXiv and those of the Particle Data Group. In 2007, many providers of information in the field came together for a summit at SLAC to see how physics information resources could be enhanced, and the INSPIRE project emerged from that meeting. The vision behind INSPIRE was built by a survey launched by the four labs to evaluate the real needs of the community. INSPIRE responds to these directives from the community by combining the most successful aspe...

  7. A bio-inspired image coder with temporal scalability

    CERN Document Server

    Masmoudi, Khaled; Kornprobst, Pierre

    2011-01-01

    We present a novel bio-inspired and dynamic coding scheme for static images. Our coder aims at reproducing the main steps of the visual stimulus processing in the mammalians retina taking into account its time behavior. The main novelty of this work is to show how to exploit the time behavior of the retina cells to ensure, in a simple way, scalability and bit allocation. To do so, our main source of inspiration will be the biologically plausible retina model called Virtual Retina. Following a similar structure, our model has two stages. The first stage is an image transform which is performed by the outer layers in the retina. Here it is modelled by filtering the image with a bank of difference of Gaussians with time-delays. The second stage is a time-dependent analog-to-digital conversion which is performed by the inner layers in the retina. Thanks to its conception, our coder enables scalability and bit allocation across time. Also, compared to the JPEG standards, our decoded images do not show annoying art...

  8. An adaptive gaze stabilization controller inspired by the vestibulo-ocular reflex.

    Science.gov (United States)

    Lenz, A; Balakrishnan, T; Pipe, A G; Melhuish, C

    2008-09-01

    The vestibulo-ocular reflex stabilizes vision in many vertebrates. It integrates inertial and visual information to drive the eyes in the opposite direction to head movement and thereby stabilizes the image on the retina. Its adaptive nature guarantees stable vision even when the biological system undergoes dynamic changes (due to disease, growth or fatigue etc), a characteristic especially desirable in autonomous robotic systems. Based on novel, biologically plausible neurological models, we have developed a robotic testbed to qualitatively evaluate the performance of these algorithms. We show how the adaptive controller can adapt to a time varying plant and elaborate how this biologically inspired control architecture can be employed in general engineering applications where sensory feedback is very noisy and/or delayed.

  9. A visualization tool to support decision making in environmental and biological planning

    Science.gov (United States)

    Romañach, Stephanie S.; McKelvy, James M.; Conzelmann, Craig; Suir, Kevin J.

    2014-01-01

    Large-scale ecosystem management involves consideration of many factors for informed decision making. The EverVIEW Data Viewer is a cross-platform desktop decision support tool to help decision makers compare simulation model outputs from competing plans for restoring Florida's Greater Everglades. The integration of NetCDF metadata conventions into EverVIEW allows end-users from multiple institutions within and beyond the Everglades restoration community to share information and tools. Our development process incorporates continuous interaction with targeted end-users for increased likelihood of adoption. One of EverVIEW's signature features is side-by-side map panels, which can be used to simultaneously compare species or habitat impacts from alternative restoration plans. Other features include examination of potential restoration plan impacts across multiple geographic or tabular displays, and animation through time. As a result of an iterative, standards-driven approach, EverVIEW is relevant to large-scale planning beyond Florida, and is used in multiple biological planning efforts in the United States.

  10. PathwayExplorer: web service for visualizing high-throughput expression data on biological pathways.

    Science.gov (United States)

    Mlecnik, Bernhard; Scheideler, Marcel; Hackl, Hubert; Hartler, Jürgen; Sanchez-Cabo, Fatima; Trajanoski, Zlatko

    2005-07-01

    While generation of high-throughput expression data is becoming routine, the fast, easy, and systematic presentation and analysis of these data in a biological context is still an obstacle. To address this need, we have developed PathwayExplorer, which maps expression profiles of genes or proteins simultaneously onto major, currently available regulatory, metabolic and cellular pathways from KEGG, BioCarta and GenMAPP. PathwayExplorer is a platform-independent web server application with an optional standalone Java application using a SOAP (simple object access protocol) interface. Mapped pathways are ranked for the easy selection of the pathway of interest, displaying all available genes of this pathway with their expression profiles in a selectable and intuitive color code. Pathway maps produced can be downloaded as PNG, JPG or as high-resolution vector graphics SVG. The web service is freely available at https://pathwayexplorer.genome.tugraz.at; the standalone client can be downloaded at http://genome.tugraz.at.

  11. Bio-inspired variable structural color materials.

    Science.gov (United States)

    Zhao, Yuanjin; Xie, Zhuoying; Gu, Hongcheng; Zhu, Cun; Gu, Zhongze

    2012-04-21

    Natural structural color materials, especially those that can undergo reversible changes, are attracting increasing interest in a wide variety of research fields. Inspired by the natural creatures, many elaborately nanostructured photonic materials with variable structural colors were developed. These materials have found important applications in switches, display devices, sensors, and so on. In this critical review, we will provide up-to-date research concerning the natural and bio-inspired photonic materials with variable structural colors. After introducing the variable structural colors in natural creatures, we will focus on the studies of artificial variable structural color photonic materials, including their bio-inspired designs, fabrications and applications. The prospects for the future development of these fantastic variable structural color materials will also be presented. We believe this review will promote the communications among biology, bionics, chemistry, optical physics, and material science (196 references).

  12. Inspiration is "Mission Critical"

    Science.gov (United States)

    McCarthy, D. W.; DeVore, E.; Lebofsky, L.

    2014-07-01

    In spring 2013, the President's budget proposal restructured the nation's approach to STEM education, eliminating ˜$50M of NASA Science Mission Directorate (SMD) funding with the intent of transferring it to the Dept. of Education, National Science Foundation, and Smithsonian Institution. As a result, Education and Public Outreach (EPO) would no longer be a NASA mission requirement and funds that had already been competed, awarded, and productively utilized were lost. Since 1994, partnerships of scientists, engineers, and education specialists were required to create innovative approaches to EPO, providing a direct source of inspiration for today's youth that may now be lost. Although seldom discussed or evaluated, "inspiration" is the beginning of lasting education. For decades, NASA's crewed and robotic missions have motivated students of all ages and have demonstrated a high degree of leverage in society. Through personal experiences we discuss (1) the importance of inspiration in education, (2) how NASA plays a vital role in STEM education, (3) examples of high-leverage educational materials showing why NASA should continue embedding EPO specialists within mission teams, and (4) how we can document the role of inspiration. We believe that personal histories are an important means of assessing the success of EPO. We hope this discussion will lead other people to document similar stories of educational success and perhaps to undertake longitudinal studies of the impact of inspiration.

  13. Fast Wavelet-Based Visual Classification

    CERN Document Server

    Yu, Guoshen

    2008-01-01

    We investigate a biologically motivated approach to fast visual classification, directly inspired by the recent work of Serre et al. Specifically, trading-off biological accuracy for computational efficiency, we explore using wavelet and grouplet-like transforms to parallel the tuning of visual cortex V1 and V2 cells, alternated with max operations to achieve scale and translation invariance. A feature selection procedure is applied during learning to accelerate recognition. We introduce a simple attention-like feedback mechanism, significantly improving recognition and robustness in multiple-object scenes. In experiments, the proposed algorithm achieves or exceeds state-of-the-art success rate on object recognition, texture and satellite image classification, language identification and sound classification.

  14. Nature as Inspiration

    Science.gov (United States)

    Tank, Kristina; Moore, Tamara; Strnat, Meg

    2015-01-01

    This article describes the final lesson within a seven-day STEM and literacy unit that is part of the Picture STEM curriculum (pictureSTEM. org) and uses engineering to integrate science and mathematics learning in a meaningful way (Tank and Moore 2013). For this engineering challenge, students used nature as a source of inspiration for designs to…

  15. An Ark of Inspiration.

    Science.gov (United States)

    King, Steve

    2001-01-01

    Describes an art project suitable for middle and high school students in which they either combine identifiable parts from different animals to create one creature or take one animal and creatively distort it. Explains that this lesson enables students to be satisfied with their animal-inspired artwork. (CMK)

  16. Ndebele Inspired Houses

    Science.gov (United States)

    Rice, Nicole

    2012-01-01

    The house paintings of the South African Ndebele people are more than just an attempt to improve the aesthetics of a community; they are a source of identity and significance for Ndebele women. In this article, the author describes an art project wherein students use the tradition of Ndebele house painting as inspiration for creating their own…

  17. Inspire & innovate : Endbericht

    NARCIS (Netherlands)

    Cornelissen, T.; Lugtenaar, M.; Balendonck, J.; Ruckelshausen, A.; Wit, de R.

    2008-01-01

    Met het project Inspire & Innovate helpt de EU Nederlandse en Duitse bedrijven in met name de sectoren Food en Life Sciences op weg. Het project is bedoeld voor MKB-bedrijven in de Euregio Rijn-Waal en de EUREGIO die inhoudelijke en financiële ondersteuning zoeken om hun innovatieplannen door te

  18. Optimal Control through Biologically-Inspired Pursuit

    Science.gov (United States)

    2004-01-01

    Transactions on Automatic Control 48, 988– 1001. Roumeliotis, S.I. and G.A. Bekey (2002). Distributed multi-robot localization. IEEE Transactions on Robotics and...1999). Distributed covering by ant- robots using evaporating traces. IEEE Transactions on Robotics and Automation 15(5), 918–933.

  19. Trusted computation through biologically inspired processes

    Science.gov (United States)

    Anderson, Gustave W.

    2013-05-01

    Due to supply chain threats it is no longer a reasonable assumption that traditional protections alone will provide sufficient security for enterprise systems. The proposed cognitive trust model architecture extends the state-of-the-art in enterprise anti-exploitation technologies by providing collective immunity through backup and cross-checking, proactive health monitoring and adaptive/autonomic threat response, and network resource diversity.

  20. Biologically Inspired Polymer Micro-Patterned Adhesives

    Science.gov (United States)

    2008-11-01

    contained a volatile, hydrophilic phase.1 Another suggests that the pad secretion from the locust Locusta migratoria is an emulsion of lipidic nano...R.; Stierhof, Y. D.; Gorb, S.; Schwarz, U. Chemical composition of the attachment pad secretion of the locust Locusta migratoria . Insect Biochem

  1. Biological Inspiration for Agile Autonomous Air Vehicles

    Science.gov (United States)

    2007-11-01

    vehicles in confined airspace will quickly exceed the abilities of a remote human operator, substantial autonomy is essential. The political, ethical ...and Kirschner, 1997 provide an in-depth but accessible discussion on the interplay of biochemistry, genetics and embryology in animal evolution

  2. Learning from nature: biologically-inspired sensors

    NARCIS (Netherlands)

    Wicaksono, D.H.B.

    2008-01-01

    New emerging sensing applications demand novel sensors in micro-/nano-scale to enable integration and embedding into higher level structures or systems. Downsizing the structure will usually decrease the sensitivity of the sensors, since the sensitivity is a function of geometrical parameters, e.g.

  3. Project Summary: Biology-Inspired Autonomous Control

    Science.gov (United States)

    2011-02-01

    relative high performance predictability currently associated with automated machines. Anyone who has walked a normally well behaved male dog in the...possibilities as well. Attitude control systems normally include proportional and integral control on sensed attitude, with damping and robustness provided...attacking predators. Some examples include red-wing black bird nest defense [1], meerkat predator mobbing [2], and predator identification in guppy schools

  4. Biologic

    CERN Document Server

    Kauffman, L H

    2002-01-01

    In this paper we explore the boundary between biology and the study of formal systems (logic). In the end, we arrive at a summary formalism, a chapter in "boundary mathematics" where there are not only containers but also extainers ><, entities open to interaction and distinguishing the space that they are not. The boundary algebra of containers and extainers is to biologic what boolean algebra is to classical logic. We show how this formalism encompasses significant parts of the logic of DNA replication, the Dirac formalism for quantum mechanics, formalisms for protein folding and the basic structure of the Temperley Lieb algebra at the foundations of topological invariants of knots and links.

  5. Adaptive optoelectronic camouflage systems with designs inspired by cephalopod skins.

    Science.gov (United States)

    Yu, Cunjiang; Li, Yuhang; Zhang, Xun; Huang, Xian; Malyarchuk, Viktor; Wang, Shuodao; Shi, Yan; Gao, Li; Su, Yewang; Zhang, Yihui; Xu, Hangxun; Hanlon, Roger T; Huang, Yonggang; Rogers, John A

    2014-09-09

    Octopus, squid, cuttlefish, and other cephalopods exhibit exceptional capabilities for visually adapting to or differentiating from the coloration and texture of their surroundings, for the purpose of concealment, communication, predation, and reproduction. Long-standing interest in and emerging understanding of the underlying ultrastructure, physiological control, and photonic interactions has recently led to efforts in the construction of artificial systems that have key attributes found in the skins of these organisms. Despite several promising options in active materials for mimicking biological color tuning, existing routes to integrated systems do not include critical capabilities in distributed sensing and actuation. Research described here represents progress in this direction, demonstrated through the construction, experimental study, and computational modeling of materials, device elements, and integration schemes for cephalopod-inspired flexible sheets that can autonomously sense and adapt to the coloration of their surroundings. These systems combine high-performance, multiplexed arrays of actuators and photodetectors in laminated, multilayer configurations on flexible substrates, with overlaid arrangements of pixelated, color-changing elements. The concepts provide realistic routes to thin sheets that can be conformally wrapped onto solid objects to modulate their visual appearance, with potential relevance to consumer, industrial, and military applications.

  6. Neurobiologically inspired mobile robot navigation and planning

    Directory of Open Access Journals (Sweden)

    Mathias Quoy

    2007-11-01

    Full Text Available After a short review of biologically inspired navigation architectures, mainly relying on modeling the hippocampal anatomy, or at least some of its functions, we present a navigation and planning model for mobile robots. This architecture is based on a model of the hippocampal and prefrontal interactions. In particular, the system relies on the definition of a new cell type “transition cells” that encompasses traditional “place cells”.

  7. A Regional Monitoring and Visualization System for Decision Support and Disaster Management Applications for the Mesoamerican Biological Corridor and Beyond

    Science.gov (United States)

    Irwin, Daniel

    2002-01-01

    The Mesoamerican Biological Corridor (MBC)-a network of managed and protected areas extending from Mexico to Columbia-is a crucial initiative for the Mesoamerican region, with a central development concept of integrating conservation and sustainable use of biodiversity within the framework of sustainable economic development. The MBC is of particular importance to the Central American Commission for Environment and Development (CCAD), which is comprised of the environmental ministers from the seven Central American countries. Responsible for determining priority areas for action in the corridor, CCAD decision makers require current and accurate information, and access to the dynamic knowledge of the changes in the MBC such as deforestation hotspots, fires, and the effects of natural disasters. Currently this information is not integrated and in disparate locations throughout the region and the world. Leveraging NASA technology, satellite data, and capability, we propose to team with the World Bank and the CCAD to develop a regional monitoring and visualization system-with central nodes at the NASA/Marshall Space Flight Center and at CCAD headquarters. This system will assimilate NASA spatial datasets (e.g. MODIS, Landsat, etc.), spatial data from other sources (commercial and public-domain), and ancillary data developed in each of the seven Central American countries (soils, transportation networks, biodiversity indicator maps, etc.). The system will function as a "virtual dashboard" for monitoring the MBC and provide the critical decision support tools for CCAD decision makers. The CCAD central node will also serve as a high-tech showcase for the corridor among the international community, other decision-makers, the media, and students.

  8. Inspiral into Gargantua

    CERN Document Server

    Gralla, Samuel E; Warburton, Niels

    2016-01-01

    We model the inspiral of a compact object into a more massive black hole rotating very near the theoretical maximum. We find that once the body enters the near-horizon regime the gravitational radiation is characterized by a constant frequency, equal to (twice) the horizon frequency, with an exponentially damped profile. This contrasts with the usual "chirping" behavior and, if detected, would constitute a "smoking gun" for a near-extremal black hole in nature.

  9. Quantum-Inspired Maximizer

    Science.gov (United States)

    Zak, Michail

    2008-01-01

    A report discusses an algorithm for a new kind of dynamics based on a quantum- classical hybrid-quantum-inspired maximizer. The model is represented by a modified Madelung equation in which the quantum potential is replaced by different, specially chosen 'computational' potential. As a result, the dynamics attains both quantum and classical properties: it preserves superposition and entanglement of random solutions, while allowing one to measure its state variables, using classical methods. Such optimal combination of characteristics is a perfect match for quantum-inspired computing. As an application, an algorithm for global maximum of an arbitrary integrable function is proposed. The idea of the proposed algorithm is very simple: based upon the Quantum-inspired Maximizer (QIM), introduce a positive function to be maximized as the probability density to which the solution is attracted. Then the larger value of this function will have the higher probability to appear. Special attention is paid to simulation of integer programming and NP-complete problems. It is demonstrated that the problem of global maximum of an integrable function can be found in polynomial time by using the proposed quantum- classical hybrid. The result is extended to a constrained maximum with applications to integer programming and TSP (Traveling Salesman Problem).

  10. Inspiring a generation

    CERN Multimedia

    2012-01-01

    The motto of the 2012 Olympic and Paralympic Games is ‘Inspire a generation’ so it was particularly pleasing to see science, the LHC and Higgs bosons featuring so strongly in the opening ceremony of the Paralympics last week.   It’s a sign of just how far our field has come that such a high-profile event featured particle physics so strongly, and we can certainly add our support to that motto. If the legacy of London 2012 is a generation inspired by science as well as sport, then the games will have more than fulfilled their mission. Particle physics has truly inspiring stories to tell, going well beyond Higgs and the LHC, and the entire community has played its part in bringing the excitement of frontier research in particle physics to a wide audience. Nevertheless, we cannot rest on our laurels: maintaining the kind of enthusiasm for science we witnessed at the Paralympic opening ceremony will require constant vigilance, and creative thinking about ways to rea...

  11. Building Blocks Propagation in Quantum-Inspired Genetic Algorithm

    OpenAIRE

    Nowotniak, Robert; Kucharski, Jacek

    2010-01-01

    This paper presents an analysis of building blocks propagation in Quantum-Inspired Genetic Algorithm, which belongs to a new class of metaheuristics drawing their inspiration from both biological evolution and unitary evolution of quantum systems. The expected number of quantum chromosomes matching a schema has been analyzed and a random variable corresponding to this issue has been introduced. The results have been compared with Simple Genetic Algorithm. Also, it has been presented how selec...

  12. Switchable bio-inspired adhesives

    Science.gov (United States)

    Kroner, Elmar

    2015-03-01

    Geckos have astonishing climbing abilities. They can adhere to almost any surface and can run on walls and even stick to ceilings. The extraordinary adhesion performance is caused by a combination of a complex surface pattern on their toes and the biomechanics of its movement. These biological dry adhesives have been intensely investigated during recent years because of the unique combination of adhesive properties. They provide high adhesion, allow for easy detachment, can be removed residue-free, and have self-cleaning properties. Many aspects have been successfully mimicked, leading to artificial, bio-inspired, patterned dry adhesives, and were addressed and in some aspects they even outperform the adhesion capabilities of geckos. However, designing artificial patterned adhesion systems with switchable adhesion remains a big challenge; the gecko's adhesion system is based on a complex hierarchical surface structure and on advanced biomechanics, which are both difficult to mimic. In this paper, two approaches are presented to achieve switchable adhesion. The first approach is based on a patterned polydimethylsiloxane (PDMS) polymer, where adhesion can be switched on and off by applying a low and a high compressive preload. The switch in adhesion is caused by a reversible mechanical instability of the adhesive silicone structures. The second approach is based on a composite material consisting of a Nickel- Titanium (NiTi) shape memory alloy and a patterned adhesive PDMS layer. The NiTi alloy is trained to change its surface topography as a function of temperature, which results in a change of the contact area and of alignment of the adhesive pattern towards a substrate, leading to switchable adhesion. These examples show that the unique properties of bio-inspired adhesives can be greatly improved by new concepts such as mechanical instability or by the use of active materials which react to external stimuli.

  13. Eesti õpetaja pälvis Inspiration Software'i stipendiumi / Ave Lauringson

    Index Scriptorium Estoniae

    Lauringson, Ave

    2007-01-01

    USA tarkvarafirma Inspiration Software tegi teatavaks 30 õpetaja nimed üle maailma, kes saavad 2007. aasta haridusstipendiumi (Inspired Teacher Scholarships for Visual Learning). Nende seas on ka Lasnamäe Lasteaia-Algkooli õpetaja, Tiigrihüppe SA ekspert ja koolitaja ning Tiigri Tegija 2007 auhinnasaaja Ingrid Maadvere

  14. Bio-inspired dynamic robots

    Science.gov (United States)

    Rudolph, Alan S.; Wax, Steven G.; Christodoulou, Leo

    2003-09-01

    The unique performance of biological systems across a wide spectrum of phylogenetic species has historically provided inspirations for roboticists in new designs and fabrication of new robotic platforms. Of particular interest to a number of important applications is to create dynamic robots able to adapt to a change in their world, unplanned events that are sometimes unexpected, and sometimes unstable, harsh conditions. It is likely that the exploring dynamics in biological systems will continue to provide rich solutions to attaining robots capable of more complex tasks for this purpose. This is because the long-term design process of evolution utilizes a natural selection process that responds to such changes. Recently, there have been significant advances across a number of interdisciplinary efforts that have generated new capabilities in biorobotics. Whole body dynamics that capture the force dynamics and functional stability of legged systems over rough terrain have been elucidated and applied in legged robotic systems. Exploying the force dynamics of flapping winged insect flight has provided key discoveries and enabled the fabrication of new micro air vehicles. New classes of materials are being developed that emulate the ability of natural muscle, capturing the compliant and soft subtle movement and performance of biological appendages. In addition, classes of new multifunctional materials are being developed to enable the design of biorobotics with the structural and functional efficiency of living organisms. Optical flow and other sensors based on the principles of invertebrate vision have been implemented on robotic platforms for autonomous robotic guidance and control. These fundamental advances have resulted in the emergence of a new generation of bioinspired dynamic robots which show significant performance improvements in early prototype testing and that could someday be useful in a number of significant applications such as search and rescue and

  15. #IWD2016 Academic Inspiration

    DEFF Research Database (Denmark)

    Meier, Ninna

    2016-01-01

    What academics or books have inspired you in your writing and research, or helped to make sense of the world around you? In this feature essay, Ninna Meier returns to her experience of reading Hannah Arendt as she sought to understand work and how it relates to value production in capitalist...... economies. Meier recounts how Arendt’s book On Revolution (1963) forged connective threads between the ‘smallest parts’ and the ‘largest wholes’ and showed how academic work is never fully relegated to the past, but can return in new iterations across time....

  16. A tissue-inspired amorphous photonic metamaterial

    CERN Document Server

    Bi, Dapeng

    2016-01-01

    Inspired by how cells pack in dense biological tissues, we design an amorphous material which possesses a complete photonic band gap. A physical parameter inspired by how cells adhere with one another and regulate their shapes can continuously tune the photonic band gap size as well as the bulk mechanical property of the material. The material can be further tuned to undergo a solid-fluid phase transition during which the shear modulus vanishes yet the photonic band gap persists, hence giving rise to a photonic fluid that is robust to flow and rearrangements. Experimentally this design should lead to the engineering of self-assembled non-rigid photonic structures with photonic band gaps that can be controlled in real time.

  17. When science inspires art

    CERN Multimedia

    Anaïs Vernède

    2011-01-01

    On Tuesday 18 January 2011, artist Pipilotti Rist came to CERN to find out how science could provide her with a source of inspiration for her art and perhaps to get ideas for future work. Pipilotti, who is an eclectic artist always on the lookout for an original source of inspiration, is almost as passionate about physics as she is about art.   Ever Is Over All, 1997, audio video installation by Pipilotti Rist.  View of the installation at the National Museum for Foreign Art, Sofia, Bulgaria. © Pipilotti Rist. Courtesy the artist and Hauser & Wirth. Photo by Angel Tzvetanov. Swiss video-maker Pipilotti Rist (her real name is Elisabeth Charlotte Rist), who is well-known in the international art world for her highly colourful videos and creations, visited CERN for the first time on Tuesday 18 January 2011.  Her visit represented a trip down memory lane, since she originally studied physics before becoming interested in pursuing a career as an artist and going on to de...

  18. The scientific study of inspiration in the creative process: Challenges and opportunities

    Directory of Open Access Journals (Sweden)

    Victoria C. Oleynick

    2014-06-01

    Full Text Available Inspiration is a motivational state that compels individuals to bring ideas into fruition. Creators have long argued that inspiration is important to the creative process, but until recently, scientists have not investigated this claim. In this article, we review challenges to the study of creative inspiration, as well as solutions to these challenges afforded by theoretical and empirical work on inspiration over the past decade. First, we discuss the problem of definitional ambiguity, which has been addressed through an integrative process of construct conceptualization. Second, we discuss the challenge of how to operationalize inspiration. This challenge has been overcome by the development and validation of the Inspiration Scale, which may be used to assess trait or state inspiration. Third, we address ambiguity regarding how inspiration differs from related concepts (creativity, insight, positive affect by discussing discriminant validity. Next, we discuss the preconception that inspiration is less important than perspiration (effort, and we review empirical evidence that inspiration and effort both play important—but different—roles in the creative process. Finally, with many challenges overcome, we argue that the foundation is now set for a new generation of research focused on neural underpinnings. We discuss potential challenges to and opportunities for the neuroscientific study of inspiration. A better understanding of the biological basis of inspiration will illuminate the process through which creative ideas fire the soul, such that individuals are compelled to transform ideas into products and solutions that may benefit society.

  19. Bio-inspired algorithms applied to molecular docking simulations.

    Science.gov (United States)

    Heberlé, G; de Azevedo, W F

    2011-01-01

    Nature as a source of inspiration has been shown to have a great beneficial impact on the development of new computational methodologies. In this scenario, analyses of the interactions between a protein target and a ligand can be simulated by biologically inspired algorithms (BIAs). These algorithms mimic biological systems to create new paradigms for computation, such as neural networks, evolutionary computing, and swarm intelligence. This review provides a description of the main concepts behind BIAs applied to molecular docking simulations. Special attention is devoted to evolutionary algorithms, guided-directed evolutionary algorithms, and Lamarckian genetic algorithms. Recent applications of these methodologies to protein targets identified in the Mycobacterium tuberculosis genome are described.

  20. VI International Workshop on Nature Inspired Cooperative Strategies for Optimization

    CERN Document Server

    Otero, Fernando; Masegosa, Antonio

    2014-01-01

    Biological and other natural processes have always been a source of inspiration for computer science and information technology. Many emerging problem solving techniques integrate advanced evolution and cooperation strategies, encompassing a range of spatio-temporal scales for visionary conceptualization of evolutionary computation. This book is a collection of research works presented in the VI International Workshop on Nature Inspired Cooperative Strategies for Optimization (NICSO) held in Canterbury, UK. Previous editions of NICSO were held in Granada, Spain (2006 & 2010), Acireale, Italy (2007), Tenerife, Spain (2008), and Cluj-Napoca, Romania (2011). NICSO 2013 and this book provides a place where state-of-the-art research, latest ideas and emerging areas of nature inspired cooperative strategies for problem solving are vigorously discussed and exchanged among the scientific community. The breadth and variety of articles in this book report on nature inspired methods and applications such as Swarm In...

  1. Tree-inspired piezoelectric energy harvesting

    Science.gov (United States)

    Hobbs, William B.; Hu, David L.

    2012-01-01

    We design and test micro-watt energy-harvesters inspired by tree trunks swaying in the wind. A uniform flow vibrates a linear array of four cylinders affixed to piezoelectric energy transducers. Particular attention is paid to measuring the energy generated as a function of cylinder spacing, flow speed, and relative position of the cylinder within the array. Peak power is generated using cylinder center-to-center spacings of 3.3 diameters and flow speeds in which the vortex shedding frequency is 1.6 times the natural frequency of the cylinders. Using these flow speeds and spacings, the power generated by downstream cylinders can exceed that of leading cylinders by more than an order of magnitude. We visualize the flow in this system by studying the behavior of a dynamically matched flowing soap film with imbedded styrofoam disks. Our qualitative visualizations suggest that peak energy harvesting occurs under conditions in which vortices have fully detached from the leading cylinder.

  2. Geophysics in INSPIRE

    Science.gov (United States)

    Sőrés, László

    2013-04-01

    INSPIRE is a European directive to harmonize spatial data in Europe. Its' aim is to establish a transparent, multidisciplinary network of environmental information by using international standards and OGC web services. Spatial data themes defined in the annex of the directive cover 34 domains that are closely bundled to environment and spatial information. According to the INSPIRE roadmap all data providers must setup discovery, viewing and download services and restructure data stores to provide spatial data as defined by the underlying specifications by 2014 December 1. More than 3000 institutions are going to be involved in the progress. During the data specification process geophysics as an inevitable source of geo information was introduced to Annex II Geology. Within the Geology theme Geophysics is divided into core and extended model. The core model contains specifications for legally binding data provisioning and is going to be part of the Implementation Rules of the INSPIRE directives. To minimize the work load of obligatory data transformations the scope of the core model is very limited and simple. It covers the most essential geophysical feature types that are relevant in economic and environmental context. To fully support the use cases identified by the stake holders the extended model was developed. It contains a wide range of spatial object types for geophysical measurements, processed and interpreted results, and wrapper classes to help data providers in using the Observation and Measurements (O&M) standard for geophysical data exchange. Instead of introducing the traditional concept of "geophysical methods" at a high structural level the data model classifies measurements and geophysical models based on their spatial characteristics. Measurements are classified as geophysical station (point), geophysical profile (curve) and geophysical swath (surface). Generic classes for processing results and interpretation models are curve model (1D), surface

  3. [Biological adaptation and immune status of preschool children with visual function disorders in conditions of preschool educational institutions of compensating type].

    Science.gov (United States)

    Bannikova, L P; Koksharov, A V

    2013-01-01

    For implementation of a comprehensive approach in the elaboration of preventive and corrective measures in children with impaired visual function in conditions of preschool educational institutions of compensating type there were studied adaptation reserves of their organism, as well as indices of immune status. Biological adaptation was studied with the help ofcardiointervalography in 111 children aged 6-7years. With the use of ELISA 88 children were examined in terms of IgA, IgM, IgG, slgA in saliva.

  4. Theosophically Inspired Movements in Denmark

    DEFF Research Database (Denmark)

    Dybdal, René

    2016-01-01

    The theosophical movement has had a significant influence on the esoteric milieu in Denmark during the 20th Century. In this paper the inspiration on other Groups in Denmark is explored.......The theosophical movement has had a significant influence on the esoteric milieu in Denmark during the 20th Century. In this paper the inspiration on other Groups in Denmark is explored....

  5. Augmented Reality as a Visualizing facilitator in Nursing Education

    DEFF Research Database (Denmark)

    Rahn, Annette; Kjærgaard, Hanne Wacher

    2014-01-01

    analysis. The setting is an anatomy course with 30 1st-year undergraduates at one of the schools of nursing at VIA University College, Denmark. An app was developed that would allow students to visualize the workings of a set of lungs “inside” a student’s body using AR technology and an iPad in contrast......Title: Augmented Reality as a visualizing facilitator in nursing education Background: Understanding the workings of the biological human body is as complex as the body itself, and because of their complexity, the phenomena of respiration and lung anatomy pose a special problem for nursing students...... to earlier used visualizations, e.g. pictures, videos, and models. In groups of 45, the students worked with the app and with questions inspired by an inquiry based science education approach (IBSE). Data Observation and video recording of student actions and responses took place. In addition, students were...

  6. On the Role of Visual Teaching in Biology Teaching%直观教学在生物教学中的作用

    Institute of Scientific and Technical Information of China (English)

    戎鹏柱

    2012-01-01

    直观教学是生物教学中最重要的教学手段之一,几乎所有的生物课都能利用这种方法教学,利用这一手段的效果能直接决定学生的学习效果。所以,教师必须对直观教学的意义、种类和运用方法有全面深入的了解,并掌握相关技能和技巧,才能不断提高教学质量。%Visual teaching is one of the most important teaching methods in biology teaching,for it can be used in nearly all biology classes to directly improve students' learning effect.Therefore,the teacher must deeply understand visual teaching method,and grasp relevant skills,so as to continuously improve teaching quality.

  7. Combining Bio-inspired Sensing with Bio-inspired Locomotion

    DEFF Research Database (Denmark)

    Shaikh, Danish; Hallam, John; Christensen-Dalsgaard, Jakob

    In this paper we present a preliminary Braitenberg vehicle–like approach to combine bio-inspired audition with bio-inspired quadruped locomotion in simulation. Locomotion gaits of the salamander–like robot Salamandra robotica are modified by a lizard’s peripheral auditory system model that modula......In this paper we present a preliminary Braitenberg vehicle–like approach to combine bio-inspired audition with bio-inspired quadruped locomotion in simulation. Locomotion gaits of the salamander–like robot Salamandra robotica are modified by a lizard’s peripheral auditory system model...... that modulates the parameters of the locomotor central pattern generators. We present phonotactic performance results of the simulated lizard-salamander hybrid robot....

  8. Holography inspired stringy hadrons

    Science.gov (United States)

    Sonnenschein, Jacob

    2017-01-01

    Holography inspired stringy hadrons (HISH) is a set of models that describe hadrons: mesons, baryons and glueballs as strings in flat four dimensional space-time. The models are based on a "map" from stringy hadrons of holographic confining backgrounds. In this note we review the "derivation" of the models. We start with a brief reminder of the passage from the AdS5 ×S5 string theory to certain flavored confining holographic models. We then describe the string configurations in holographic backgrounds that correspond to a Wilson line, a meson, a baryon and a glueball. The key ingredients of the four dimensional picture of hadrons are the "string endpoint mass" and the "baryonic string vertex". We determine the classical trajectories of the HISH. We review the current understanding of the quantization of the hadronic strings. We end with a summary of the comparison of the outcome of the HISH models with the PDG data about mesons and baryons. We extract the values of the tension, masses and intercepts from best fits, write down certain predictions for higher excited hadrons and present attempts to identify glueballs.

  9. [Medicine inspired by poverty].

    Science.gov (United States)

    Barnard, H

    2000-05-13

    Since his arrival in Egypt in 1994 the author joined a number of archaeological expeditions as a surveyor and part-time physician. During this latter activity he came into contact with the beliefs and practices of the local workmen and those of the Ababda Bedouin in particular. Living a harsh life in the southern part of the Egyptian Eastern Desert, their medicine seems to be inspired by poverty. Widely used for all internal disorders are 'kaya bil-naar': oval scars made with red-hot metal instruments. Another, less common, form of scarification is 'mi'ah-hed'asher', three parallel lines carved deeply into the cheek of the patient. 'Muhawy' is the bite of a snake into the earlobe of the patient, to prevent snake-bites. Another prophylactic is the 'higab', a small leather pouch containing a magical object or text. Therapies for less serious disorders include the use of herbs, spices and foodstuffs, often prepared in special ways. Externally, car fuel and axle grease are widely used. With the development of the Red Sea coast for tourism, the life of the Ababda Bedouin will change fundamentally. The above practices are likely to be replaced by Western medicine, probably a change for the better for these people.

  10. Inspiration, anyone? (Editorial

    Directory of Open Access Journals (Sweden)

    Lindsay Glynn

    2006-09-01

    Full Text Available I have to admit that writing an editorial for this issue was a struggle. Trying to sit down and write when the sun was shining outside and most of my colleagues were on vacation was, to say the least, difficult. Add to that research projects and conferences…let’s just say that I found myself less than inspired. A pitiful plea for ideas to a colleague resulted in the reintroduction to a few recent evidence based papers and resources which inspired further searching and reading. Though I generally find myself surrounded (more like buried in research papers and EBLIP literature, somehow I had missed the great strides that have been made of late in the world of evidence based library and information practice. I realize now that I am inspired by the researchers, authors and innovators who are putting EBLIP on the proverbial map. My biggest beef with library literature in general has been the plethora of articles highlighting what we should be doing. Take a close look at the evidence based practitioners in the information professions: these are some of the people who are actively practicing what has been preached for the past few years. Take, for example, the about‐to‐be released Libraries using Evidence Toolkit by Northern Sydney Central Coast Health and The University of Newcastle, Australia (see their announcement in this issue. An impressive advisory group is responsible for maintaining the currency and relevancy of the site as well as promoting the site and acting as a steering committee for related projects. This group is certainly doing more than “talking the talk”: they took their experience at the 3rd International Evidence Based Librarianship Conference and did something with the information they obtained by implementing solutions that worked in their environment. The result? The creation of a collection of tools for all of us to use. This toolkit is just what EBLIP needs: a portal to resources aimed at supporting the information

  11. Inspired by CERN

    CERN Multimedia

    2004-01-01

    Art students inspired by CERN will be returning to show their work 9 to 16 October in Building 500, outside the Auditorium. Seventeen art students from around Europe visited CERN last January for a week of introductions to particle physics and astrophysics, and discussions with CERN scientists about their projects. A CERN scientist "adopted"each artist so they could ask questions during and after the visit. Now the seeds planted during their visit have come to fruition in a show using many media and exploring varied concepts, such as how people experience the online world, the sheer scale of CERN's equipment, and the abstractness of the entities scientists are looking for. "The work is so varied, people are going to love some pieces and detest others," says Andrew Charalambous, the project coordinator from University College London who is also curating the exhibition. "It's contemporary modern art, and that's sometimes difficult to take in." For more information on this thought-provoking show, see: htt...

  12. BioMAV: bio-inspired intelligence for autonomous flight

    NARCIS (Netherlands)

    Gerke, P.K.; Langevoort, J.; Lagarde, S.; Bax, L.; Grootswagers, T.; Drenth, R.-J.; Slieker, V.; Vuurpijl, L.; Haselager, P.; Sprinkhuizen-Kuyper, I.; Van Otterlo, M.; De Croon, G.C.H.E.

    2011-01-01

    This paper aims to contribute to research on biologically inspired micro air vehicles in two ways: (i) it explores a novel repertoire of behavioral modules which can be controlled through finite state machines (FSM) and (ii) elementary movement detectors (EMD) are combined with a center/surround edge

  13. BioMAV: bio-inspired intelligence for autonomous flight

    NARCIS (Netherlands)

    Gerke, P.K.; Langevoort, J.E.; Lagarde, S.; Bax, L.; Grootswagers, T.; Drenth, R.; Slieker, V.M.; Vuurpijl, L.G.; Haselager, W.F.G.; Sprinkhuizen-Kuyper, I.G.; Otterlo, M. van; Croon, G.C.H.E. de

    2011-01-01

    This paper aims to contribute to research on biologically inspired micro air vehicles in two ways: (i) it explores a novel repertoire of behavioral modules which can be controlled through finite state machines (FSM) and (ii) elementary movement detectors (EMD) are combined with a center/ surround ed

  14. BioVenn - a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams

    NARCIS (Netherlands)

    Hulsen, T.; Vlieg, J. de; Alkema, W.

    2008-01-01

    BACKGROUND: In many genomics projects, numerous lists containing biological identifiers are produced. Often it is useful to see the overlap between different lists, enabling researchers to quickly observe similarities and differences between the data sets they are analyzing. One of the most popular

  15. Visualization in simulation tools: requirements and a tool specification to support the teaching of dynamic biological processes.

    Science.gov (United States)

    Jørgensen, Katarina M; Haddow, Pauline C

    2011-08-01

    Simulation tools are playing an increasingly important role behind advances in the field of systems biology. However, the current generation of biological science students has either little or no experience with such tools. As such, this educational glitch is limiting both the potential use of such tools as well as the potential for tighter cooperation between the designers and users. Although some simulation tool producers encourage their use in teaching, little attempt has hitherto been made to analyze and discuss their suitability as an educational tool for noncomputing science students. In general, today's simulation tools assume that the user has a stronger mathematical and computing background than that which is found in most biological science curricula, thus making the introduction of such tools a considerable pedagogical challenge. This paper provides an evaluation of the pedagogical attributes of existing simulation tools for cell signal transduction based on Cognitive Load theory. Further, design recommendations for an improved educational simulation tool are provided. The study is based on simulation tools for cell signal transduction. However, the discussions are relevant to a broader biological simulation tool set.

  16. Immuno-inspired robotic applications: a review

    CERN Document Server

    Raza, Ali

    2012-01-01

    Artificial immune systems primarily mimic the adaptive nature of biological immune functions. Their ability to adapt to varying pathogens makes such systems a suitable choice for various robotic applications. Generally, AIS-based robotic applications map local instantaneous sensory information into either an antigen or a co-stimulatory signal, according to the choice of representation schema. Algorithms then use relevant immune functions to output either evolved antibodies or maturity of dendritic cells, in terms of actuation signals. It is observed that researchers, in an attempt to solve the problem in hand, do not try to replicate the biological immunity but select necessary immune functions instead, resulting in an ad-hoc manner these applications are reported. Authors, therefore, present a comprehensive review of immuno-inspired robotic applications in an attempt to categorize them according to underlying immune definitions. Implementation details are tabulated in terms of corresponding mathematical expr...

  17. Nature-inspired optimization algorithms

    CERN Document Server

    Yang, Xin-She

    2014-01-01

    Nature-Inspired Optimization Algorithms provides a systematic introduction to all major nature-inspired algorithms for optimization. The book's unified approach, balancing algorithm introduction, theoretical background and practical implementation, complements extensive literature with well-chosen case studies to illustrate how these algorithms work. Topics include particle swarm optimization, ant and bee algorithms, simulated annealing, cuckoo search, firefly algorithm, bat algorithm, flower algorithm, harmony search, algorithm analysis, constraint handling, hybrid methods, parameter tuning

  18. Visualizing the quality of dimensionality reduction

    NARCIS (Netherlands)

    Mokbel, Bassam; Lueks, Wouter; Gisbrecht, Andrej; Hammer, Barbara

    2013-01-01

    The growing number of dimensionality reduction methods available for data visualization has recently inspired the development of formal measures to evaluate the resulting low-dimensional representation independently from the methods' inherent criteria. Many evaluation measures can be summarized base

  19. a Novel Ship Detection Method for Large-Scale Optical Satellite Images Based on Visual Lbp Feature and Visual Attention Model

    Science.gov (United States)

    Haigang, Sui; Zhina, Song

    2016-06-01

    Reliably ship detection in optical satellite images has a wide application in both military and civil fields. However, this problem is very difficult in complex backgrounds, such as waves, clouds, and small islands. Aiming at these issues, this paper explores an automatic and robust model for ship detection in large-scale optical satellite images, which relies on detecting statistical signatures of ship targets, in terms of biologically-inspired visual features. This model first selects salient candidate regions across large-scale images by using a mechanism based on biologically-inspired visual features, combined with visual attention model with local binary pattern (CVLBP). Different from traditional studies, the proposed algorithm is high-speed and helpful to focus on the suspected ship areas avoiding the separation step of land and sea. Largearea images are cut into small image chips and analyzed in two complementary ways: Sparse saliency using visual attention model and detail signatures using LBP features, thus accordant with sparseness of ship distribution on images. Then these features are employed to classify each chip as containing ship targets or not, using a support vector machine (SVM). After getting the suspicious areas, there are still some false alarms such as microwaves and small ribbon clouds, thus simple shape and texture analysis are adopted to distinguish between ships and nonships in suspicious areas. Experimental results show the proposed method is insensitive to waves, clouds, illumination and ship size.

  20. Building Blocks Propagation in Quantum-Inspired Genetic Algorithm

    CERN Document Server

    Nowotniak, Robert

    2010-01-01

    This paper presents an analysis of building blocks propagation in Quantum-Inspired Genetic Algorithm, which belongs to a new class of metaheuristics drawing their inspiration from both biological evolution and unitary evolution of quantum systems. The expected number of quantum chromosomes matching a schema has been analyzed and a random variable corresponding to this issue has been introduced. The results have been compared with Simple Genetic Algorithm. Also, it has been presented how selected binary quantum chromosomes cover a domain of one-dimensional fitness function.

  1. Effect of the Mn Oxidation State on Single-Molecule-Magnet Properties: Mn(III) vs Mn(IV) in Biologically Inspired DyMn3O4 Cubanes.

    Science.gov (United States)

    Lin, Po-Heng; Tsui, Emily Y; Habib, Fatemah; Murugesu, Muralee; Agapie, Theodor

    2016-06-20

    Inspired by the ferromagnetic coupling in the cubane model CaMn(IV)3O4 of the oxygen-evolving complex of photosystem II, 3d-4f mixed-metal DyMn3O4 clusters were prepared for investigation of the magnetic properties. For comparison, YMn(IV)3O4 and YMn(IV)2Mn(III)O4 clusters were investigated as well and showed ferromagnetic interactions, like the calcium analogue. DyMn(IV)3O4 displays single-molecule-magnet properties, while the one-electron-reduced species (DyMn(IV)2Mn(III)O4) does not, despite the presence of a Mn(III) center with higher spin and single-ion anisotropy.

  2. Brain-inspired Stochastic Models and Implementations

    KAUST Repository

    Al-Shedivat, Maruan

    2015-05-12

    One of the approaches to building artificial intelligence (AI) is to decipher the princi- ples of the brain function and to employ similar mechanisms for solving cognitive tasks, such as visual perception or natural language understanding, using machines. The recent breakthrough, named deep learning, demonstrated that large multi-layer networks of arti- ficial neural-like computing units attain remarkable performance on some of these tasks. Nevertheless, such artificial networks remain to be very loosely inspired by the brain, which rich structures and mechanisms may further suggest new algorithms or even new paradigms of computation. In this thesis, we explore brain-inspired probabilistic mechanisms, such as neural and synaptic stochasticity, in the context of generative models. The two questions we ask here are: (i) what kind of models can describe a neural learning system built of stochastic components? and (ii) how can we implement such systems e ̆ciently? To give specific answers, we consider two well known models and the corresponding neural architectures: the Naive Bayes model implemented with a winner-take-all spiking neural network and the Boltzmann machine implemented in a spiking or non-spiking fashion. We propose and analyze an e ̆cient neuromorphic implementation of the stochastic neu- ral firing mechanism and study the e ̄ects of synaptic unreliability on learning generative energy-based models implemented with neural networks.

  3. Physicists Get INSPIREd: INSPIRE Project and Grid Applications

    Science.gov (United States)

    Klem, Jukka; Iwaszkiewicz, Jan

    2011-12-01

    INSPIRE is the new high-energy physics scientific information system developed by CERN, DESY, Fermilab and SLAC. INSPIRE combines the curated and trusted contents of SPIRES database with Invenio digital library technology. INSPIRE contains the entire HEP literature with about one million records and in addition to becoming the reference HEP scientific information platform, it aims to provide new kinds of data mining services and metrics to assess the impact of articles and authors. Grid and cloud computing provide new opportunities to offer better services in areas that require large CPU and storage resources including document Optical Character Recognition (OCR) processing, full-text indexing of articles and improved metrics. D4Science-II is a European project that develops and operates an e-Infrastructure supporting Virtual Research Environments (VREs). It develops an enabling technology (gCube) which implements a mechanism for facilitating the interoperation of its e-Infrastructure with other autonomously running data e-Infrastructures. As a result, this creates the core of an e-Infrastructure ecosystem. INSPIRE is one of the e-Infrastructures participating in D4Science-II project. In the context of the D4Science-II project, the INSPIRE e-Infrastructure makes available some of its resources and services to other members of the resulting ecosystem. Moreover, it benefits from the ecosystem via a dedicated Virtual Organization giving access to an array of resources ranging from computing and storage resources of grid infrastructures to data and services.

  4. Cognition inspired framework for indoor scene annotation

    Science.gov (United States)

    Ye, Zhipeng; Liu, Peng; Zhao, Wei; Tang, Xianglong

    2015-09-01

    We present a simple yet effective scene annotation framework based on a combination of bag-of-visual words (BoVW), three-dimensional scene structure estimation, scene context, and cognitive theory. From a macroperspective, the proposed cognition-based hybrid motivation framework divides the annotation problem into empirical inference and real-time classification. Inspired by the inference ability of human beings, common objects of indoor scenes are defined for experience-based inference, while in the real-time classification stage, an improved BoVW-based multilayer abstract semantics labeling method is proposed by introducing abstract semantic hierarchies to narrow the semantic gap and improve the performance of object categorization. The proposed framework was evaluated on a variety of common data sets and experimental results proved its effectiveness.

  5. Towards Bio-Inspired Chromatic Behaviours in Surveillance Robots

    Directory of Open Access Journals (Sweden)

    Sampath Kumar Karutaa Gnaniar

    2016-09-01

    Full Text Available The field of Robotics is ever growing at the same time as posing enormous challenges. Numerous works has been done in biologically inspired robotics emulating models, systems and elements of nature for the purpose of solving traditional robotics problems. Chromatic behaviours are abundant in nature across a variety of living species to achieve camouflage, signaling, and temperature regulation. The ability of these creatures to successfully blend in with their environment and communicate by changing their colour is the fundamental inspiration for our research work. In this paper, we present dwarf chameleon inspired chromatic behaviour in the context of an autonomous surveillance robot, “PACHONDHI”. In our experiments, we successfully validated the ability of the robot to autonomously change its colour in relation to the terrain that it is traversing for maximizing detectability to friendly security agents and minimizing exposure to hostile agents, as well as to communicate with fellow cooperating robots.

  6. BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams

    Directory of Open Access Journals (Sweden)

    de Vlieg Jacob

    2008-10-01

    Full Text Available Abstract Background In many genomics projects, numerous lists containing biological identifiers are produced. Often it is useful to see the overlap between different lists, enabling researchers to quickly observe similarities and differences between the data sets they are analyzing. One of the most popular methods to visualize the overlap and differences between data sets is the Venn diagram: a diagram consisting of two or more circles in which each circle corresponds to a data set, and the overlap between the circles corresponds to the overlap between the data sets. Venn diagrams are especially useful when they are 'area-proportional' i.e. the sizes of the circles and the overlaps correspond to the sizes of the data sets. Currently there are no programs available that can create area-proportional Venn diagrams connected to a wide range of biological databases. Results We designed a web application named BioVenn to summarize the overlap between two or three lists of identifiers, using area-proportional Venn diagrams. The user only needs to input these lists of identifiers in the textboxes and push the submit button. Parameters like colors and text size can be adjusted easily through the web interface. The position of the text can be adjusted by 'drag-and-drop' principle. The output Venn diagram can be shown as an SVG or PNG image embedded in the web application, or as a standalone SVG or PNG image. The latter option is useful for batch queries. Besides the Venn diagram, BioVenn outputs lists of identifiers for each of the resulting subsets. If an identifier is recognized as belonging to one of the supported biological databases, the output is linked to that database. Finally, BioVenn can map Affymetrix and EntrezGene identifiers to Ensembl genes. Conclusion BioVenn is an easy-to-use web application to generate area-proportional Venn diagrams from lists of biological identifiers. It supports a wide range of identifiers from the most used

  7. Inspiring Student Self-Motivation

    Directory of Open Access Journals (Sweden)

    Virginia Brackett

    2007-01-01

    Full Text Available While normally appreciative of the invitation to join colleagues in a discussion of pedagogy and what “works” in the classroom, I have in most instances reluctantly participated in discussion of student motivation. I dip my toe into this philosophical quagmire only if permitted license to substitute the phrase student inspiration in place of student motivation. I also find it helpful to turn the rhetorical tables, as it were, and consider self-motivation on the part of students. The concept of individuals who hold some sense of self that a classroom mentor may nurture through student inspiration is one in which I place a modicum of trust. To “inspire” is literally to “breathe in,” to actively pull sustenance from a proffered external source. Active student determination based on some sense of self may couple with instructor inspiration to promote academic success.

  8. SABRE: a bio-inspired fault-tolerant electronic architecture.

    Science.gov (United States)

    Bremner, P; Liu, Y; Samie, M; Dragffy, G; Pipe, A G; Tempesti, G; Timmis, J; Tyrrell, A M

    2013-03-01

    As electronic devices become increasingly complex, ensuring their reliable, fault-free operation is becoming correspondingly more challenging. It can be observed that, in spite of their complexity, biological systems are highly reliable and fault tolerant. Hence, we are motivated to take inspiration for biological systems in the design of electronic ones. In SABRE (self-healing cellular architectures for biologically inspired highly reliable electronic systems), we have designed a bio-inspired fault-tolerant hierarchical architecture for this purpose. As in biology, the foundation for the whole system is cellular in nature, with each cell able to detect faults in its operation and trigger intra-cellular or extra-cellular repair as required. At the next level in the hierarchy, arrays of cells are configured and controlled as function units in a transport triggered architecture (TTA), which is able to perform partial-dynamic reconfiguration to rectify problems that cannot be solved at the cellular level. Each TTA is, in turn, part of a larger multi-processor system which employs coarser grain reconfiguration to tolerate faults that cause a processor to fail. In this paper, we describe the details of operation of each layer of the SABRE hierarchy, and how these layers interact to provide a high systemic level of fault tolerance.

  9. Aurelia aurita bio-inspired tilt sensor

    Science.gov (United States)

    Smith, Colin; Villanueva, Alex; Priya, Shashank

    2012-10-01

    The quickly expanding field of mobile robots, unmanned underwater vehicles, and micro-air vehicles urgently needs a cheap and effective means for measuring vehicle inclination. Commonly, tilt or inclination has been mathematically derived from accelerometers; however, there is inherent error in any indirect measurement. This paper reports a bio-inspired tilt sensor that mimics the natural balance organ of jellyfish, called the ‘statocyst’. Biological statocysts from the species Aurelia aurita were characterized by scanning electron microscopy to investigate the morphology and size of the natural sensor. An artificial tilt sensor was then developed by using printed electronics that incorporates a novel voltage divider concept in conjunction with small surface mount devices. This sensor was found to have minimum sensitivity of 4.21° with a standard deviation of 1.77°. These results open the possibility of developing elegant tilt sensor architecture for both air and water based platforms.

  10. Inspiration: One Percent and Rising

    Science.gov (United States)

    Walling, Donovan R.

    2009-01-01

    Inventor Thomas Edison once famously declared, "Genius is one percent inspiration and ninety-nine percent perspiration." If that's the case, then the students the author witnessed at the International Student Media Festival (ISMF) last November in Orlando, Florida, are geniuses and more. The students in the ISMF pre-conference workshop had much to…

  11. Inversion exercises inspired by mechanics

    Science.gov (United States)

    Groetsch, C. W.

    2016-02-01

    An elementary calculus transform, inspired by the centroid and gyration radius, is introduced as a prelude to the study of more advanced transforms. Analysis of the transform, including its inversion, makes use of several key concepts from basic calculus and exercises in the application and inversion of the transform provide practice in the use of technology in calculus.

  12. Allothetic and idiothetic sensor fusion in rat-inspired robot localization

    Science.gov (United States)

    Weitzenfeld, Alfredo; Fellous, Jean-Marc; Barrera, Alejandra; Tejera, Gonzalo

    2012-06-01

    We describe a spatial cognition model based on the rat's brain neurophysiology as a basis for new robotic navigation architectures. The model integrates allothetic (external visual landmarks) and idiothetic (internal kinesthetic information) cues to train either rat or robot to learn a path enabling it to reach a goal from multiple starting positions. It stands in contrast to most robotic architectures based on SLAM, where a map of the environment is built to provide probabilistic localization information computed from robot odometry and landmark perception. Allothetic cues suffer in general from perceptual ambiguity when trying to distinguish between places with equivalent visual patterns, while idiothetic cues suffer from imprecise motions and limited memory recalls. We experiment with both types of cues in different maze configurations by training rats and robots to find the goal starting from a fixed location, and then testing them to reach the same target from new starting locations. We show that the robot, after having pre-explored a maze, can find a goal with improved efficiency, and is able to (1) learn the correct route to reach the goal, (2) recognize places already visited, and (3) exploit allothetic and idiothetic cues to improve on its performance. We finally contrast our biologically-inspired approach to more traditional robotic approaches and discuss current work in progress.

  13. Mapping biological systems to network systems

    CERN Document Server

    Rathore, Heena

    2016-01-01

    The book presents the challenges inherent in the paradigm shift of network systems from static to highly dynamic distributed systems – it proposes solutions that the symbiotic nature of biological systems can provide into altering networking systems to adapt to these changes. The author discuss how biological systems – which have the inherent capabilities of evolving, self-organizing, self-repairing and flourishing with time – are inspiring researchers to take opportunities from the biology domain and map them with the problems faced in network domain. The book revolves around the central idea of bio-inspired systems -- it begins by exploring why biology and computer network research are such a natural match. This is followed by presenting a broad overview of biologically inspired research in network systems -- it is classified by the biological field that inspired each topic and by the area of networking in which that topic lies. Each case elucidates how biological concepts have been most successfully ...

  14. Animal-Inspired Sensing for Autonomously Climbing or Avoiding Obstacles

    Directory of Open Access Journals (Sweden)

    William A. Lewinger

    2009-01-01

    Full Text Available The way that natural systems navigate their environments with agility, intelligence and efficiency is an inspiration to engineers. Biological attributes such as modes of locomotion, sensory modalities, behaviours and physical appearance have been used as design goals. While methods of locomotion allow robots to move through their environment, the addition of sensing, perception and decision making are necessary to perform this task with autonomy. This paper contrasts how the addition of two separate sensing modalities – tactile antennae and non-contact sensing – and a low-computation, capable microcontroller allow a biologically abstracted mobile robot to make insect-inspired decisions when encountering a shelflike obstacle, navigating a cluttered environment without collision and seeking vision-based goals while avoiding obstacles.

  15. A Tony Thomas-Inspired Guide to INSPIRE

    Energy Technology Data Exchange (ETDEWEB)

    O' Connell, Heath B.; /Fermilab

    2010-04-01

    The SPIRES database was created in the late 1960s to catalogue the high energy physics preprints received by the SLAC Library. In the early 1990s it became the first database on the web and the first website outside of Europe. Although indispensible to the HEP community, its aging software infrastructure is becoming a serious liability. In a joint project involving CERN, DESY, Fermilab and SLAC, a new database, INSPIRE, is being created to replace SPIRES using CERN's modern, open-source Invenio database software. INSPIRE will maintain the content and functionality of SPIRES plus many new features. I describe this evolution from the birth of SPIRES to the current day, noting that the career of Tony Thomas spans this timeline.

  16. BioAir: Bio-Inspired Airborne Infrastructure Reconfiguration

    Science.gov (United States)

    2016-01-01

    UAV ) in order to autonomously form and maintain a dynamic communication network. This system draws upon inspirations from biological cell...presents the BioAIR system for autonomous communication , command and control of a swarm of UAVs . The idea is to form a communication network comprised of...deployment, yet maintaining communications should not interfere with the primary tasks of these entities. The BioAIR system was developed to coordinate

  17. Neural networks and neuroscience-inspired computer vision.

    Science.gov (United States)

    Cox, David Daniel; Dean, Thomas

    2014-09-22

    Brains are, at a fundamental level, biological computing machines. They transform a torrent of complex and ambiguous sensory information into coherent thought and action, allowing an organism to perceive and model its environment, synthesize and make decisions from disparate streams of information, and adapt to a changing environment. Against this backdrop, it is perhaps not surprising that computer science, the science of building artificial computational systems, has long looked to biology for inspiration. However, while the opportunities for cross-pollination between neuroscience and computer science are great, the road to achieving brain-like algorithms has been long and rocky. Here, we review the historical connections between neuroscience and computer science, and we look forward to a new era of potential collaboration, enabled by recent rapid advances in both biologically-inspired computer vision and in experimental neuroscience methods. In particular, we explore where neuroscience-inspired algorithms have succeeded, where they still fail, and we identify areas where deeper connections are likely to be fruitful.

  18. Decrypting $SO(10)$-inspired leptogenesis

    CERN Document Server

    Di Bari, Pasquale; Fiorentin, Michele Re

    2014-01-01

    Encouraged by the recent results from neutrino oscillation experiments, we perform an analytical study of $SO(10)$-inspired models and leptogenesis with hierarchical right-handed (RH) neutrino spectrum. Under the approximation of negligible misalignment between the neutrino Yukawa basis and the charged lepton basis, we find an analytical expression for the final asymmetry directly in terms of the low energy neutrino parameters that fully reproduces previous numerical results. This expression also shows that is possible to identify an effective leptogenesis phase for these models. When we also impose the wash-out of a large pre-existing asymmetry $N^{\\rm p,i}_{B-L}$, the strong thermal (ST) condition, we derive analytically all those constraints on the low energy neutrino parameters that characterise the {\\rm ST}-$SO(10)$-inspired leptogenesis solution, confirming previous numerical results. In particular we show why, though neutrino masses have to be necessarily normally ordered, the solution implies an analy...

  19. Observing binary inspiral with LIGO

    CERN Document Server

    Finn, L S

    1994-01-01

    Gravitational radiation from a binary neutron star or black hole system leads to orbital decay and the eventual coalescence of the binary's components. During the last several minutes before the binary components coalesce, the radiation will enter the bandwidth of the United States Laser Inteferometer Gravitational-wave Observatory (LIGO) and the French/Italian VIRGO gravitational radiation detector. The combination of detector sensitivity, signal strength, and source density and distribution all point to binary inspiral as the most likely candidate for observation among all the anticipated sources of gravitational radiation for LIGO/VIRGO. Here I review briefly some of the questions that are posed to theorists by the impending observation of binary inspiral.

  20. Systematization of the protein sequence diversity in enzymes related to secondary metabolic pathways in plants, in the context of big data biology inspired by the KNApSAcK motorcycle database.

    Science.gov (United States)

    Ikeda, Shun; Abe, Takashi; Nakamura, Yukiko; Kibinge, Nelson; Hirai Morita, Aki; Nakatani, Atsushi; Ono, Naoaki; Ikemura, Toshimichi; Nakamura, Kensuke; Altaf-Ul-Amin, Md; Kanaya, Shigehiko

    2013-05-01

    Biology is increasingly becoming a data-intensive science with the recent progress of the omics fields, e.g. genomics, transcriptomics, proteomics and metabolomics. The species-metabolite relationship database, KNApSAcK Core, has been widely utilized and cited in metabolomics research, and chronological analysis of that research work has helped to reveal recent trends in metabolomics research. To meet the needs of these trends, the KNApSAcK database has been extended by incorporating a secondary metabolic pathway database called Motorcycle DB. We examined the enzyme sequence diversity related to secondary metabolism by means of batch-learning self-organizing maps (BL-SOMs). Initially, we constructed a map by using a big data matrix consisting of the frequencies of all possible dipeptides in the protein sequence segments of plants and bacteria. The enzyme sequence diversity of the secondary metabolic pathways was examined by identifying clusters of segments associated with certain enzyme groups in the resulting map. The extent of diversity of 15 secondary metabolic enzyme groups is discussed. Data-intensive approaches such as BL-SOM applied to big data matrices are needed for systematizing protein sequences. Handling big data has become an inevitable part of biology.

  1. Commentary: "A systems view on the future of medicine: Inspiration from Chinese medicine?"

    NARCIS (Netherlands)

    Verpoorte, R.; Crommelin, D.; Danhof, M.; Gilissen, L.J.W.J.; Schuitmaker, H.; Greef, de J.; Witkamp, R.F.

    2009-01-01

    Chinese medicine could serve as a source of inspiration for drug development. Using systems biology in combination with reverse pharmacology is a novel way for the discovery of novel biological active compounds and targets as well as for proving the occurrence of synergy and prodrugs. A key factor f

  2. Detection and visualization of non-linear structures in large datasets using Exploratory Projection Pursuit Laboratory (EPP-Lab software

    Directory of Open Access Journals (Sweden)

    Souad Larabi Marie-Sainte

    2017-01-01

    Full Text Available This article consists of using biologically inspired algorithms in order to detect potentially interesting structures in large and multidimensional data sets. Data exploration and the detection of interesting structures are based on the use of Projection Pursuit that involves the definition and the optimization of an index associated with each direction or projection. The optimization of a projection index should provide a set of multiple optima that is expected to correspond to interesting graphical representations in low dimensional space. The implementation of the bio-inspired algorithms along with the projection pursuit develops a new software called EPP-Lab. Projection pursuit is widely used in different scientific domains (biology, pharmacy, bioinformatics, biometry, etc but not widely present in the well-known softwares. EPP-Lab is dedicated to recognize and visualize clusters and outlying observations on one dimension from high dimensional and multivariate data sets. It includes different statistical techniques for results analysis. It provides several features and gives the user the option to adjust the parameters of the selected bio-inspired methods or to use defaults values. EPP-Lab is a unique software for detection, visualization and analysis of non-linear structures. The performance of this tool has been validated by testing different real and simulated data sets.

  3. Objects Classification by Learning-Based Visual Saliency Model and Convolutional Neural Network

    Science.gov (United States)

    Li, Na; Yang, Yongjia

    2016-01-01

    Humans can easily classify different kinds of objects whereas it is quite difficult for computers. As a hot and difficult problem, objects classification has been receiving extensive interests with broad prospects. Inspired by neuroscience, deep learning concept is proposed. Convolutional neural network (CNN) as one of the methods of deep learning can be used to solve classification problem. But most of deep learning methods, including CNN, all ignore the human visual information processing mechanism when a person is classifying objects. Therefore, in this paper, inspiring the completed processing that humans classify different kinds of objects, we bring forth a new classification method which combines visual attention model and CNN. Firstly, we use the visual attention model to simulate the processing of human visual selection mechanism. Secondly, we use CNN to simulate the processing of how humans select features and extract the local features of those selected areas. Finally, not only does our classification method depend on those local features, but also it adds the human semantic features to classify objects. Our classification method has apparently advantages in biology. Experimental results demonstrated that our method made the efficiency of classification improve significantly. PMID:27803711

  4. Adaptive visual attention model

    OpenAIRE

    Hügli, Heinz; Bur, Alexandre

    2009-01-01

    Visual attention, defined as the ability of a biological or artificial vision system to rapidly detect potentially relevant parts of a visual scene, provides a general purpose solution for low level feature detection in a vision architecture. Well considered for its universal detection behaviour, the general model of visual attention is suited for any environment but inferior to dedicated feature detectors in more specific environments. The goal of the development presented in this paper is t...

  5. Natural product-inspired rational design, synthesis and biological evaluation of 2,3-dihydropyrano[2,3-f]chromen-4(8H)-one based hybrids as potential mitochondrial apoptosis inducers.

    Science.gov (United States)

    Sakthivel, Palaniappan; Ilangovan, Andivelu; Kaushik, Mahabir Prasad

    2016-10-21

    Synthesis of novel pyranochromanone amide hybrids, by combining pyranochromanone pharmacophore and privileged scaffolds such as 2-amino-1,3,4-thiadiaole/2-aminothiazole/aminopyridine/aminonaphthalene and anti-cancer evaluation of a series led us to discover a series of new chemical entities (NCEs) showing broad spectrum of anti-cancer activity against three different human cancer cell lines (MCF-7, A549 and HeLa), at IC50 values ranging from 14.3 to 97.8 μM. Among them, some compounds such as 15b, 15d, 20a and 20b displayed excellent activity against breast cancer cell line MCF-7. Detailed biological studies such as AO/EB dual staining, Hoechst 33342 staining, FACS analysis of mitochondrial membrane potential (Δψm) using JC-1 dye and DNA fragmentation confirmed the apoptosis induced by the hybrids. Gene expression studies by Real time RT-PCR has shown that these compounds are efficient regulator of anti-apoptotic gene Bcl-2. Western blot analysis also revealed that these compounds persuade apoptosis through intrinsic pathway by up-regulating the pro-apoptotic protein Bax and down-regulating the anti-apoptotic protein Bcl-2. Molecular docking studies reveal that compounds 15b and 20b binds efficiently with Bcl-2 promoter G-quadruplex.

  6. Human-inspired lighting the intention control in robot systems with of glare avoidance%Human-inspired lighting the intention control in robot systems with of glare avoidance

    Institute of Scientific and Technical Information of China (English)

    Chen Shengyong; Guan Qiu; Liu Sheng; Bi Dexue

    2011-01-01

    This paper presents some human-inspired strategies for lighting control in a robot system for best scene interpretation, where the main intention is to avoid possible glares or highlights occurring in images. It firstly compares the characteristics of human eyes and robot eyes. Then some evaluation criteria are addressed to assess the lighting conditions. A bio-inspired method is adopted to avoid the visual glare which is caused by either direct illumination from large light sources or indirect illumination reflected by smooth surfaces. Appropriate methods are proposed to optimize the pose and optical parameters of the light source and the vision camera.

  7. Topological data analysis of biological aggregation models.

    Science.gov (United States)

    Topaz, Chad M; Ziegelmeier, Lori; Halverson, Tom

    2015-01-01

    We apply tools from topological data analysis to two mathematical models inspired by biological aggregations such as bird flocks, fish schools, and insect swarms. Our data consists of numerical simulation output from the models of Vicsek and D'Orsogna. These models are dynamical systems describing the movement of agents who interact via alignment, attraction, and/or repulsion. Each simulation time frame is a point cloud in position-velocity space. We analyze the topological structure of these point clouds, interpreting the persistent homology by calculating the first few Betti numbers. These Betti numbers count connected components, topological circles, and trapped volumes present in the data. To interpret our results, we introduce a visualization that displays Betti numbers over simulation time and topological persistence scale. We compare our topological results to order parameters typically used to quantify the global behavior of aggregations, such as polarization and angular momentum. The topological calculations reveal events and structure not captured by the order parameters.

  8. Natural photonics for industrial inspiration.

    Science.gov (United States)

    Parker, Andrew R

    2009-05-13

    There are two considerations for optical biomimetics: the diversity of submicrometre architectures found in the natural world, and the industrial manufacture of these. A review exists on the latter subject, where current engineering methods are considered along with those of the natural cells. Here, on the other hand, I will provide a modern review of the different categories of reflectors and antireflectors found in animals, including their optical characterization. The purpose of this is to inspire designers within the $2 billion annual optics industry.

  9. Scientific visualization uncertainty, multifield, biomedical, and scalable visualization

    CERN Document Server

    Chen, Min; Johnson, Christopher; Kaufman, Arie; Hagen, Hans

    2014-01-01

    Based on the seminar that took place in Dagstuhl, Germany in June 2011, this contributed volume studies the four important topics within the scientific visualization field: uncertainty visualization, multifield visualization, biomedical visualization and scalable visualization. • Uncertainty visualization deals with uncertain data from simulations or sampled data, uncertainty due to the mathematical processes operating on the data, and uncertainty in the visual representation, • Multifield visualization addresses the need to depict multiple data at individual locations and the combination of multiple datasets, • Biomedical is a vast field with select subtopics addressed from scanning methodologies to structural applications to biological applications, • Scalability in scientific visualization is critical as data grows and computational devices range from hand-held mobile devices to exascale computational platforms. Scientific Visualization will be useful to practitioners of scientific visualization, ...

  10. Bio-Inspired Optimization of Sustainable Energy Systems: A Review

    Directory of Open Access Journals (Sweden)

    Yu-Jun Zheng

    2013-01-01

    Full Text Available Sustainable energy development always involves complex optimization problems of design, planning, and control, which are often computationally difficult for conventional optimization methods. Fortunately, the continuous advances in artificial intelligence have resulted in an increasing number of heuristic optimization methods for effectively handling those complicated problems. Particularly, algorithms that are inspired by the principles of natural biological evolution and/or collective behavior of social colonies have shown a promising performance and are becoming more and more popular nowadays. In this paper we summarize the recent advances in bio-inspired optimization methods, including artificial neural networks, evolutionary algorithms, swarm intelligence, and their hybridizations, which are applied to the field of sustainable energy development. Literature reviewed in this paper shows the current state of the art and discusses the potential future research trends.

  11. Biological Optimisation for Nurse Scheduling

    CERN Document Server

    Twycross, Jamie

    2010-01-01

    Artificial immune systems (AISs) to date have generally been inspired by naive biological metaphors. This has limited the effectiveness of these systems. In this position paper two ways in which AISs could be made more biologically realistic are discussed. We propose that AISs should draw their inspiration from organisms which possess only innate immune systems, and that AISs should employ systemic models of the immune system to structure their overall design. An outline of plant and invertebrate immune systems is presented, and a number of contemporary research that more biologically-realistic AISs could have is also discussed.

  12. The Molecule Cloud - compact visualization of large collections of molecules

    Directory of Open Access Journals (Sweden)

    Ertl Peter

    2012-07-01

    Full Text Available Abstract Background Analysis and visualization of large collections of molecules is one of the most frequent challenges cheminformatics experts in pharmaceutical industry are facing. Various sophisticated methods are available to perform this task, including clustering, dimensionality reduction or scaffold frequency analysis. In any case, however, viewing and analyzing large tables with molecular structures is necessary. We present a new visualization technique, providing basic information about the composition of molecular data sets at a single glance. Summary A method is presented here allowing visual representation of the most common structural features of chemical databases in a form of a cloud diagram. The frequency of molecules containing particular substructure is indicated by the size of respective structural image. The method is useful to quickly perceive the most prominent structural features present in the data set. This approach was inspired by popular word cloud diagrams that are used to visualize textual information in a compact form. Therefore we call this approach “Molecule Cloud”. The method also supports visualization of additional information, for example biological activity of molecules containing this scaffold or the protein target class typical for particular scaffolds, by color coding. Detailed description of the algorithm is provided, allowing easy implementation of the method by any cheminformatics toolkit. The layout algorithm is available as open source Java code. Conclusions Visualization of large molecular data sets using the Molecule Cloud approach allows scientists to get information about the composition of molecular databases and their most frequent structural features easily. The method may be used in the areas where analysis of large molecular collections is needed, for example processing of high throughput screening results, virtual screening or compound purchasing. Several example visualizations of large

  13. Sundew-Inspired Adhesive Hydrogels Combined with Adipose-Derived Stem Cells for Wound Healing.

    Science.gov (United States)

    Sun, Leming; Huang, Yujian; Bian, Zehua; Petrosino, Jennifer; Fan, Zhen; Wang, Yongzhong; Park, Ki Ho; Yue, Tao; Schmidt, Michael; Galster, Scott; Ma, Jianjie; Zhu, Hua; Zhang, Mingjun

    2016-01-27

    The potential to harness the unique physical, chemical, and biological properties of the sundew (Drosera) plant's adhesive hydrogels has long intrigued researchers searching for novel wound-healing applications. However, the ability to collect sufficient quantities of the sundew plant's adhesive hydrogels is problematic and has eclipsed their therapeutic promise. Inspired by these natural hydrogels, we asked if sundew-inspired adhesive hydrogels could overcome the drawbacks associated with natural sundew hydrogels and be used in combination with stem-cell-based therapy to enhance wound-healing therapeutics. Using a bioinspired approach, we synthesized adhesive hydrogels comprised of sodium alginate, gum arabic, and calcium ions to mimic the properties of the natural sundew-derived adhesive hydrogels. We then characterized and showed that these sundew-inspired hydrogels promote wound healing through their superior adhesive strength, nanostructure, and resistance to shearing when compared to other hydrogels in vitro. In vivo, sundew-inspired hydrogels promoted a "suturing" effect to wound sites, which was demonstrated by enhanced wound closure following topical application of the hydrogels. In combination with mouse adipose-derived stem cells (ADSCs) and compared to other therapeutic biomaterials, the sundew-inspired hydrogels demonstrated superior wound-healing capabilities. Collectively, our studies show that sundew-inspired hydrogels contain ideal properties that promote wound healing and suggest that sundew-inspired-ADSCs combination therapy is an efficacious approach for treating wounds without eliciting noticeable toxicity or inflammation.

  14. Biological basis for space-variant sensor design I: parameters of monkey and human spatial vision

    Science.gov (United States)

    Rojer, Alan S.; Schwartz, Eric L.

    1991-02-01

    Biological sensor design has long provided inspiration for sensor design in machine vision. However relatively little attention has been paid to the actual design parameters provided by biological systems as opposed to the general nature of biological vision architectures. In the present paper we will provide a review of current knowledge of primate spatial vision design parameters and will present recent experimental and modeling work from our lab which demonstrates that a numerical conformal mapping which is a refinement of our previous complex logarithmic model provides the best current summary of this feature of the primate visual system. In this paper we will review recent work from our laboratory which has characterized some of the spatial architectures of the primate visual system. In particular we will review experimental and modeling studies which indicate that: . The global spatial architecture of primate visual cortex is well summarized by a numerical conformal mapping whose simplest analytic approximation is the complex logarithm function . The columnar sub-structure of primate visual cortex can be well summarized by a model based on a band-pass filtered white noise. We will also refer to ongoing work in our lab which demonstrates that: . The joint columnar/map structure of primate visual cortex can be modeled and summarized in terms of a new algorithm the ''''proto-column'''' algorithm. This work provides a reference-point for current engineering approaches to novel architectures for

  15. Visual Impairment

    Science.gov (United States)

    ... Loss Surgery? A Week of Healthy Breakfasts Shyness Visual Impairment KidsHealth > For Teens > Visual Impairment Print A ... with the brain, making vision impossible. What Is Visual Impairment? Many people have some type of visual ...

  16. Visual field

    Science.gov (United States)

    Perimetry; Tangent screen exam; Automated perimetry exam; Goldmann visual field exam; Humphrey visual field exam ... Confrontation visual field exam : This is a quick and basic check of the visual field. The health care provider ...

  17. Self-Organization of Spatio-Temporal Hierarchy via Learning of Dynamic Visual Image Patterns on Action Sequences.

    Science.gov (United States)

    Jung, Minju; Hwang, Jungsik; Tani, Jun

    2015-01-01

    It is well known that the visual cortex efficiently processes high-dimensional spatial information by using a hierarchical structure. Recently, computational models that were inspired by the spatial hierarchy of the visual cortex have shown remarkable performance in image recognition. Up to now, however, most biological and computational modeling studies have mainly focused on the spatial domain and do not discuss temporal domain processing of the visual cortex. Several studies on the visual cortex and other brain areas associated with motor control support that the brain also uses its hierarchical structure as a processing mechanism for temporal information. Based on the success of previous computational models using spatial hierarchy and temporal hierarchy observed in the brain, the current report introduces a novel neural network model for the recognition of dynamic visual image patterns based solely on the learning of exemplars. This model is characterized by the application of both spatial and temporal constraints on local neural activities, resulting in the self-organization of a spatio-temporal hierarchy necessary for the recognition of complex dynamic visual image patterns. The evaluation with the Weizmann dataset in recognition of a set of prototypical human movement patterns showed that the proposed model is significantly robust in recognizing dynamically occluded visual patterns compared to other baseline models. Furthermore, an evaluation test for the recognition of concatenated sequences of those prototypical movement patterns indicated that the model is endowed with a remarkable capability for the contextual recognition of long-range dynamic visual image patterns.

  18. A bio-inspired approach for in situ synthesis of tunable adhesive.

    Science.gov (United States)

    Sun, Leming; Yi, Sijia; Wang, Yongzhong; Pan, Kang; Zhong, Qixin; Zhang, Mingjun

    2014-03-01

    Inspired by the strong adhesive produced by English ivy, this paper proposes an in situ synthesis approach for fabricating tunable nanoparticle enhanced adhesives. Special attention was given to tunable features of the adhesive produced by the biological process. Parameters that may be used to tune properties of the adhesive will be proposed. To illustrate and validate the proposed approach, an experimental platform was presented for fabricating tunable chitosan adhesive enhanced by Au nanoparticles synthesized in situ. This study contributes to a bio-inspired approach for in situ synthesis of tunable nanocomposite adhesives by mimicking the natural biological processes of ivy adhesive synthesis.

  19. Bio-Inspired Clustering of Complex Products Structure based on DSM

    Directory of Open Access Journals (Sweden)

    Fan Yang

    2015-08-01

    Full Text Available Clustering plays an important role in the decomposition of complex products structure. Different clustering algorithms may achieve different effects of the decomposition. This paper aims to proposes a bio-inspired genetic algorithm that is implemented based on its reliable fitness function and design structure matrix (DSM for clustering analysis of complex products. This new bio-inspired genetic algorithm captures the features of DSM, which is base on the biological evolution theory. Examples of these products include motorcycle engines that are presented for clustering. The five cluster alternatives are obtained from the regular clustering algorithm and the bio-inspired genetic algorithm, while the best cluster alternative comes from the bio-inspired genetic algorithm. The results show that this algorithm is well adaptable, especially when the product elements have complicated and asymmetric connections.

  20. Structurally tuned iridescent surfaces inspired by nature

    Energy Technology Data Exchange (ETDEWEB)

    Deparis, Olivier; Rassart, Marie; Vandenbem, Cedric; Welch, Victoria; Vigneron, Jean Pol [Laboratoire de Physique du Solide, University of Namur, 61 rue de Bruxelles, 5000 Namur (Belgium); Lucas, Stephane [Laboratoire d' Analyses par Reactions Nucleaires, University of Namur, 61 rue de Bruxelles, 5000 Namur (Belgium)], E-mail: olivier.deparis@fundp.ac.be

    2008-01-15

    Iridescent surfaces exhibit vivid colours which change with the angle of incidence or viewing due to optical wave interference in the multilayer structure present at the wavelength scale underneath the surface. In nature, one can find examples of iridescent Coleoptera for which the hue changes either greatly or slightly with the angle. Because these species typically make these structures from a single biological material (usually chitin) and air or water as the low refractive index component, they have evolved by adjusting the layer thicknesses in order to display quite different iridescent aspects. Taking inspiration from this proven strategy, we have designed and fabricated periodic TiO{sub 2}/SiO{sub 2} multilayer films in order to demonstrate the concept of structurally tuned iridescent surfaces. Titanium or silicon oxide layers were deposited on a glass substrate using dc reactive or RF magnetron sputtering techniques, respectively. Two structures were designed for which the period and the TiO{sub 2}/SiO{sub 2} layer thickness ratio were varied in such a way that the films displayed radically different iridescent aspects: a reddish-to-greenish changing hue and a stable bluish hue. The fabricated samples were characterized through specular reflectance/transmittance measurements. Modelling of transmittance spectra using standard multilayer film theory confirmed the high quality of the twelve-period Bragg reflectors. The chromaticity coordinates, which were calculated from measured reflectance spectra taken at different angles, were in accordance with theoretical predictions.

  1. On the Cultivation of Students' Interests in Biology Teaching

    Science.gov (United States)

    Li, Yan

    2011-01-01

    This paper introduces the importance of middle school students' interests in learning biology. Considering the psychological characteristics of middle school students, this paper suggests several practical ways for inspiring students' interests in learning biology.

  2. [Nikola Tesla: flashes of inspiration].

    Science.gov (United States)

    Villarejo-Galende, Albero; Herrero-San Martín, Alejandro

    2013-01-16

    Nikola Tesla (1856-1943) was one of the greatest inventors in history and a key player in the revolution that led to the large-scale use of electricity. He also made important contributions to such diverse fields as x-rays, remote control, radio, the theory of consciousness or electromagnetism. In his honour, the international unit of magnetic induction was named after him. Yet, his fame is scarce in comparison with that of other inventors of the time, such as Edison, with whom he had several heated arguments. He was a rather odd, reserved person who lived for his inventions, the ideas for which came to him in moments of inspiration. In his autobiography he relates these flashes with a number of neuropsychiatric manifestations, which can be seen to include migraine auras, synaesthesiae, obsessions and compulsions.

  3. Collide@CERN: sharing inspiration

    CERN Document Server

    Katarina Anthony

    2012-01-01

    Late last year, Julius von Bismarck was appointed to be CERN's first "artist in residence" after winning the Collide@CERN Digital Arts award. He’ll be spending two months at CERN starting this March but, to get a flavour of what’s in store, he visited the Organization last week for a crash course in its inspiring activities.   Julius von Bismarck, taking a closer look... When we arrive to interview German artist Julius von Bismarck, he’s being given a presentation about antiprotons’ ability to kill cancer cells. The whiteboard in the room contains graphs and equations that might easily send a non-scientist running, yet as Julius puts it, “if I weren’t interested, I’d be asleep”. Given his numerous questions, he must have been fascinated. “This ‘introduction’ week has been exhilarating,” says Julius. “I’ve been able to interact ...

  4. Decrypting SO(10-inspired leptogenesis

    Directory of Open Access Journals (Sweden)

    Pasquale Di Bari

    2015-04-01

    Full Text Available Encouraged by the recent results from neutrino oscillation experiments, we perform an analytical study of SO(10-inspired models and leptogenesis with hierarchical right-handed (RH neutrino spectrum. Under the approximation of negligible misalignment between the neutrino Yukawa basis and the charged lepton basis, we find an analytical expression for the final asymmetry directly in terms of the low energy neutrino parameters that fully reproduces previous numerical results. This expression also shows that it is possible to identify an effective leptogenesis phase for these models. When we also impose the wash-out of a large pre-existing asymmetry NB−Lp,i, the strong thermal (ST condition, we derive analytically all those constraints on the low energy neutrino parameters that characterise the ST-SO(10-inspired leptogenesis solution, confirming previous numerical results. In particular we show why, though neutrino masses have to be necessarily normally ordered, the solution implies an analytical lower bound on the effective neutrino-less double beta decay neutrino mass, mee≳8 meV, for NB−Lp,i=10−3, testable with next generation experiments. This, in combination with an upper bound on the atmospheric mixing angle, necessarily in the first octant, forces the lightest neutrino mass within a narrow range m1≃(10–30 meV (corresponding to ∑imi≃(75–125 meV. We also show why the solution could correctly predict a non-vanishing reactor neutrino mixing angle and requires the Dirac phase to be in the fourth quadrant, implying sin⁡δ (and JCP negative as hinted by current global analyses. Many of the analytical results presented (expressions for the orthogonal matrix, RH neutrino mixing matrix, masses and phases can have applications beyond leptogenesis.

  5. Controlling free flight of a robotic fly using an onboard vision sensor inspired by insect ocelli

    Science.gov (United States)

    Fuller, Sawyer B.; Karpelson, Michael; Censi, Andrea; Ma, Kevin Y.; Wood, Robert J.

    2014-01-01

    Scaling a flying robot down to the size of a fly or bee requires advances in manufacturing, sensing and control, and will provide insights into mechanisms used by their biological counterparts. Controlled flight at this scale has previously required external cameras to provide the feedback to regulate the continuous corrective manoeuvres necessary to keep the unstable robot from tumbling. One stabilization mechanism used by flying insects may be to sense the horizon or Sun using the ocelli, a set of three light sensors distinct from the compound eyes. Here, we present an ocelli-inspired visual sensor and use it to stabilize a fly-sized robot. We propose a feedback controller that applies torque in proportion to the angular velocity of the source of light estimated by the ocelli. We demonstrate theoretically and empirically that this is sufficient to stabilize the robot's upright orientation. This constitutes the first known use of onboard sensors at this scale. Dipteran flies use halteres to provide gyroscopic velocity feedback, but it is unknown how other insects such as honeybees stabilize flight without these sensory organs. Our results, using a vehicle of similar size and dynamics to the honeybee, suggest how the ocelli could serve this role. PMID:24942846

  6. Controlling free flight of a robotic fly using an onboard vision sensor inspired by insect ocelli.

    Science.gov (United States)

    Fuller, Sawyer B; Karpelson, Michael; Censi, Andrea; Ma, Kevin Y; Wood, Robert J

    2014-08-06

    Scaling a flying robot down to the size of a fly or bee requires advances in manufacturing, sensing and control, and will provide insights into mechanisms used by their biological counterparts. Controlled flight at this scale has previously required external cameras to provide the feedback to regulate the continuous corrective manoeuvres necessary to keep the unstable robot from tumbling. One stabilization mechanism used by flying insects may be to sense the horizon or Sun using the ocelli, a set of three light sensors distinct from the compound eyes. Here, we present an ocelli-inspired visual sensor and use it to stabilize a fly-sized robot. We propose a feedback controller that applies torque in proportion to the angular velocity of the source of light estimated by the ocelli. We demonstrate theoretically and empirically that this is sufficient to stabilize the robot's upright orientation. This constitutes the first known use of onboard sensors at this scale. Dipteran flies use halteres to provide gyroscopic velocity feedback, but it is unknown how other insects such as honeybees stabilize flight without these sensory organs. Our results, using a vehicle of similar size and dynamics to the honeybee, suggest how the ocelli could serve this role.

  7. Business Inspiration: Small Business Leadership in Recovery?

    Science.gov (United States)

    Rae, David; Price, Liz; Bosworth, Gary; Parkinson, Paul

    2012-01-01

    Business Inspiration was a short, action-centred leadership and innovation development programme designed for owners and managers of smaller firms to address business survival and repositioning needs arising from the UK's economic downturn. The article examines the design and delivery of Business Inspiration and the impact of the programme on…

  8. Highly eccentric inspirals into a black hole

    Science.gov (United States)

    Osburn, Thomas; Warburton, Niels; Evans, Charles R.

    2016-03-01

    We model the inspiral of a compact stellar-mass object into a massive nonrotating black hole including all dissipative and conservative first-order-in-the-mass-ratio effects on the orbital motion. The techniques we develop allow inspirals with initial eccentricities as high as e ˜0.8 and initial separations as large as p ˜50 to be evolved through many thousands of orbits up to the onset of the plunge into the black hole. The inspiral is computed using an osculating elements scheme driven by a hybridized self-force model, which combines Lorenz-gauge self-force results with highly accurate flux data from a Regge-Wheeler-Zerilli code. The high accuracy of our hybrid self-force model allows the orbital phase of the inspirals to be tracked to within ˜0.1 radians or better. The difference between self-force models and inspirals computed in the radiative approximation is quantified.

  9. Bio-inspired nanomaterials and their applications as antimicrobial agents

    Directory of Open Access Journals (Sweden)

    Smita Sachin Zinjarde

    2012-01-01

    Full Text Available In the recent decades, the interdisciplinary field of nanotechnology has expanded extensively. A variety of nanoparticles (NPs have been used for a number of specialized applications. In this era facing a major problem of microorganisms developing antibiotic resistance, NPs are a lucrative option. Most physical and chemical processes of NP synthesis are associated with drawbacks and bio-inspired NPs have now become popular. This review summarizes the recent developments on the biosynthesis, characterization, and applications of NPs with particular reference to their use as antimicrobial agents. Reviewed here is the synthesis of gold and silver NPs (AgNPs by a variety of biological forms and biomolecules as well as their effectiveness toward different fungal and bacterial pathogens. The use of gold NPs (bio-inspired by plants, fungi, and bacteria and AgNPs, synthesized by carbohydrates (of plant, animal, and microbial origin, plant parts (bark, callus, leaves, peels, and tubers, fungi, and bacteria have been highlighted. In addition, the use of zinc oxide NPs (although not bio-inspired as novel antimicrobial agents have also been discussed.

  10. Product and technology innovation: what can biomimicry inspire?

    Science.gov (United States)

    Lurie-Luke, Elena

    2014-12-01

    Biomimicry (bio- meaning life in Greek, and -mimesis, meaning to copy) is a growing field that seeks to interpolate natural biological mechanisms and structures into a wide range of applications. The rise of interest in biomimicry in recent years has provided a fertile ground for innovation. This review provides an eco-system based analysis of biomimicry inspired technology and product innovation. A multi-disciplinary framework has been developed to accomplish this analysis and the findings focus on the areas that have been most strikingly affected by the application of biomimicry and also highlight the emerging trends and opportunity areas.

  11. Biologically Inspired Behaviour Design for Autonomous Robotic Fish

    Institute of Scientific and Technical Information of China (English)

    Jin-Dong Liu; Huosheng Hu

    2006-01-01

    Behaviour-based approach plays a key role for mobile robots to operate safely in unknown or dynamically changing environments. We have developed a hybrid control architecture for our autonomous robotic fish that consists of three layers: cognitive, behaviour and swim pattern. In this paper, we describe some main design issues of the behaviour layer, which is the centre of the layered control architecture of our robotic fish. Fuzzy logic control (FLC) is adopted here to design individual behaviours. Simulation and real experiments are presented to show the feasibility and the performance of the designed behaviour layer.

  12. Biologically-Inspired Deceptive Behavior for a Robot

    Science.gov (United States)

    2012-01-01

    to create in another a belief that the communicator considers to be untrue in order to increase the communicators’ payoff at the expense of the... genus Portia, which preys primarily on other spiders, deceives their prey by vibrating the web in ways that resemble a small insect getting ensnared

  13. Biologically inspired binaural hearing aid algorithms: Design principles and effectiveness

    Science.gov (United States)

    Feng, Albert

    2002-05-01

    Despite rapid advances in the sophistication of hearing aid technology and microelectronics, listening in noise remains problematic for people with hearing impairment. To solve this problem two algorithms were designed for use in binaural hearing aid systems. The signal processing strategies are based on principles in auditory physiology and psychophysics: (a) the location/extraction (L/E) binaural computational scheme determines the directions of source locations and cancels noise by applying a simple subtraction method over every frequency band; and (b) the frequency-domain minimum-variance (FMV) scheme extracts a target sound from a known direction amidst multiple interfering sound sources. Both algorithms were evaluated using standard metrics such as signal-to-noise-ratio gain and articulation index. Results were compared with those from conventional adaptive beam-forming algorithms. In free-field tests with multiple interfering sound sources our algorithms performed better than conventional algorithms. Preliminary intelligibility and speech reception results in multitalker environments showed gains for every listener with normal or impaired hearing when the signals were processed in real time with the FMV binaural hearing aid algorithm. [Work supported by NIH-NIDCD Grant No. R21DC04840 and the Beckman Institute.

  14. Biologically-inspired data decorrelation for hyper-spectral imaging

    Directory of Open Access Journals (Sweden)

    Ghita Ovidiu

    2011-01-01

    Full Text Available Abstract Hyper-spectral data allows the construction of more robust statistical models to sample the material properties than the standard tri-chromatic color representation. However, because of the large dimensionality and complexity of the hyper-spectral data, the extraction of robust features (image descriptors is not a trivial issue. Thus, to facilitate efficient feature extraction, decorrelation techniques are commonly applied to reduce the dimensionality of the hyper-spectral data with the aim of generating compact and highly discriminative image descriptors. Current methodologies for data decorrelation such as principal component analysis (PCA, linear discriminant analysis (LDA, wavelet decomposition (WD, or band selection methods require complex and subjective training procedures and in addition the compressed spectral information is not directly related to the physical (spectral characteristics associated with the analyzed materials. The major objective of this article is to introduce and evaluate a new data decorrelation methodology using an approach that closely emulates the human vision. The proposed data decorrelation scheme has been employed to optimally minimize the amount of redundant information contained in the highly correlated hyper-spectral bands and has been comprehensively evaluated in the context of non-ferrous material classification

  15. Biologically Inspired Waveform Diversity for Synthetic Autonomous Navigation Sensing

    Science.gov (United States)

    2009-11-01

    Autonomous Navigation Sensing UNCLASSIFIED/UNLIMITED (g) Long duration broadband calls are presently described only for the Malagasy sucker -footed bat...approach [12]. Target size was found not to affect call intensity during approach to targets of varying size in M. daubentonii [12]. In synthetic sensing...between target strength and frequency was developed for spheres by Lord Rayleigh over a century ago, the theoretical relationship between prey size and

  16. A Biologically-Inspired Neural Network Architecture for Image Processing

    Science.gov (United States)

    1990-12-01

    findings, in accord with other research cited here, were obtained from cortical measurements or, 15 adult cats and 12 kittens , all anesthetized (9...software models on a Cray computer. Furthermore, care should be taken to avoid exceeding machine memory capacity when running intensive processes

  17. Low Power Microrobotics Utilizing Biologically Inspired Energy Generation Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Description: building a small microrover that employs energy generated by a bacterial source Objective: investigate the usability of a microbial fuel cell to power a...

  18. Biologically-Inspired Anisotropic Flexible Wing for Optimal Flapping Flight

    Science.gov (United States)

    2013-07-01

    Airfoils,” Experiments in Fluids, Vol. 46, (2009), pp. 883- 901. 16. Chimakurthi, S., Tang, J., Palacios , R., Cesnik, C., and Shyy, W., “Computational...Tang, J., Chimakurthi, S., Palacios , R., Cesnik, C.E.S. and Shyy, W., “Computational Fluid- Structure Interaction of a Deformable Flapping Wing for

  19. Additive Layer Manufacturing of Biologically Inspired Short Fibre Reinforced Composites

    Science.gov (United States)

    2014-03-01

    conductivity ,   thermal   conductivity ,   increasing   service   temperature   and   flame   retardancy   [3].   To...then   embedded  within   a   polypropylene   (PP)   resin.   It   was   found   that   the   in-­‐plane   tensile...used   to   coat   substrates  prior  to  growth.  Post  coating  of  the  substrate,  a  

  20. Design Approach of Biologically-Inspired Musculoskeletal Humanoids

    Directory of Open Access Journals (Sweden)

    Yuto Nakanishi

    2013-04-01

    Full Text Available In order to realize more natural and various motions like humans, humanlike musculoskeletal tendon-driven humanoids have been studied. Especially, it is very challenging to design musculoskeletal body structure which consists of complicated bones, redundant powerful and flexible muscles, and large number of distributed sensors. In addition, it is very challenging to reveal humanlike intelligence to manage these complicated musculoskeletal body structure. This paper sums up life-sized musculoskeletal humanoids Kenta, Kotaro, Kenzoh and Kenshiro which we have developed so far, and describes key technologies to develop and control these robots.

  1. Biologically-Inspired Flight for Micro Air Vehicles

    Science.gov (United States)

    2012-09-01

    world ,   and   have   also   been   seen   in   flies,   dragonflies ,   and...fruit   flies,   locusts,   dragonflies ,   gliding   frogs,   gliding  mammals,   and  birds.  Crabbed   turns   are   also...medium-­‐sized     tree-­‐roosting  species  of  the  Old   World  fruit  bat   lineage,  and  two  cave-­‐roosting

  2. An active system for visually-guided reaching in 3D across binocular fixations.

    Science.gov (United States)

    Martinez-Martin, Ester; del Pobil, Angel P; Chessa, Manuela; Solari, Fabio; Sabatini, Silvio P

    2014-01-01

    Based on the importance of relative disparity between objects for accurate hand-eye coordination, this paper presents a biological approach inspired by the cortical neural architecture. So, the motor information is coded in egocentric coordinates obtained from the allocentric representation of the space (in terms of disparity) generated from the egocentric representation of the visual information (image coordinates). In that way, the different aspects of the visuomotor coordination are integrated: an active vision system, composed of two vergent cameras; a module for the 2D binocular disparity estimation based on a local estimation of phase differences performed through a bank of Gabor filters; and a robotic actuator to perform the corresponding tasks (visually-guided reaching). The approach's performance is evaluated through experiments on both simulated and real data.

  3. An Active System for Visually-Guided Reaching in 3D across Binocular Fixations

    Directory of Open Access Journals (Sweden)

    Ester Martinez-Martin

    2014-01-01

    Full Text Available Based on the importance of relative disparity between objects for accurate hand-eye coordination, this paper presents a biological approach inspired by the cortical neural architecture. So, the motor information is coded in egocentric coordinates obtained from the allocentric representation of the space (in terms of disparity generated from the egocentric representation of the visual information (image coordinates. In that way, the different aspects of the visuomotor coordination are integrated: an active vision system, composed of two vergent cameras; a module for the 2D binocular disparity estimation based on a local estimation of phase differences performed through a bank of Gabor filters; and a robotic actuator to perform the corresponding tasks (visually-guided reaching. The approach’s performance is evaluated through experiments on both simulated and real data.

  4. Whole-field visual motion drives swimming in larval zebrafish via a stochastic process.

    Science.gov (United States)

    Portugues, Ruben; Haesemeyer, Martin; Blum, Mirella L; Engert, Florian

    2015-05-01

    Caudo-rostral whole-field visual motion elicits forward locomotion in many organisms, including larval zebrafish. Here, we investigate the dependence on the latency to initiate this forward swimming as a function of the speed of the visual motion. We show that latency is highly dependent on speed for slow speeds (1.5 s, which is much longer than neuronal transduction processes. What mechanisms underlie these long latencies? We propose two alternative, biologically inspired models that could account for this latency to initiate swimming: an integrate and fire model, which is history dependent, and a stochastic Poisson model, which has no history dependence. We use these models to predict the behavior of larvae when presented with whole-field motion of varying speed and find that the stochastic process shows better agreement with the experimental data. Finally, we discuss possible neuronal implementations of these models.

  5. Biology-Derived Algorithms in Engineering Optimization

    CERN Document Server

    Yang, Xin-She

    2010-01-01

    Biology-derived algorithms are an important part of computational sciences, which are essential to many scientific disciplines and engineering applications. Many computational methods are derived from or based on the analogy to natural evolution and biological activities, and these biologically inspired computations include genetic algorithms, neural networks, cellular automata, and other algorithms.

  6. Fracture Mechanics: Inspirations from Nature

    Directory of Open Access Journals (Sweden)

    David Taylor

    2014-10-01

    Full Text Available In Nature there are many examples of materials performing structural functions. Nature requires materials which are stiff and strong to provide support against various forces, including self-weight, the dynamic forces involved in movement, and external loads such as wind or the actions of a predator. These materials and structures have evolved over millions of years; the science of Biomimetics seeks to understand Nature and, as a result, to find inspiration for the creation of better engineering solutions. There has been relatively little fundamental research work in this area from a fracture mechanics point of view. Natural materials are quite brittle and, as a result, they have evolved several interesting strategies for preventing failure by crack propagation. Fatigue is also a major problem for many animals and plants. In this paper, several examples will be given of recent work in the Bioengineering Research Centre at Trinity College Dublin, investigating fracture and fatigue in such diverse materials as bamboo, the legs and wings of insects, and living cells.

  7. Nature Inspired Hay Fever Therapy

    Institute of Scientific and Technical Information of China (English)

    Andrei P.Sommer; Dan Zhu

    2008-01-01

    The survival oriented adaptation of evolved biosystems to variations in their environment is a selective optimization process. Recognizing the optimised end product and its functionality is the classical arena of bionic engineering. In a primordial world, however, the molecular organization and functions of prebiotic systems were solely defined by formative processes in their physical and chemical environment, for instance, the interplay between interracial water layers on surfaces and solar light. The formative potential of the interplay between light (laser light) and interfacial water layers on surfaces was recently exploited in the formation of supercubane carbon nanocrystals. In evolved biosystems the formative potential of interracial water layers can still be activated by light. Here we report a case of hay fever, which was successfully treated in the course of a facial reju-venation program starting in November 2007. Targeting primarily interfacial water layers on elastin fibres in the wrinkled areas, we presumably also activated mast cells in the nasal mucosa, reported to progressively decrease in the nasal mucosa of the rabbit, when frequently irradiated. Hay fever is induced by the release of mediators, especially histamine, a process associated with the degranulation of mast cells. Decrease in mast cells numbers implies a decrease in the release of histamine. To the best of our knowledge this is the first report on the treatment of hay fever with visible light. This approach was inspired by bionic thinking, and could help ameliorating the condition of millions of people suffering from hay fever world wide.

  8. Inspired at a book fair

    CERN Multimedia

    Anaïs Schaeffer

    2012-01-01

    During the Frankfurt book fair last October, the CERN stand drew quite the crowd. Director-General Rolf Heuer was there to promote CERN’s mission and the "LHC: the Large Hadron Collider" book. He met a lot of visitors and for one of them there was also a nice follow-up…   Marcus and his father visiting the LINAC facility. Fifteen year-old Marcus lives in Lauterecken near Frankfurt. The popular book fair last autumn was for him a nice opportunity to get in touch with the CERN environment. Inspired by the stand and what the CERN people were describing, he started to ask more and more questions… So many, that Rolf Heuer decided to invite him to come to CERN and find out some of the answers for himself. A few weeks later, while recovering from an exciting visit to the ATLAS underground cavern and other CERN installations with a cup of tea in Restaurant 1, Marcus shared his enthusiasm about the Organization: “When I was younger, my moth...

  9. La maturità di INSPIRE

    Directory of Open Access Journals (Sweden)

    Mauro Salvemini

    2010-03-01

    Full Text Available INPIRE's maturityThe INSPIRE Conference 2010 took place from 23 to 25 June 2010 in Kraków, Poland. On 22 June pre-conference workshops have been organized. The theme of this year’s edition has been "INSPIRE as a Framework for Cooperation".The INSPIRE Conference has been organised through a series of plenary sessions addressing common policy issues, and parallel sessions focusing in particular on applications and implementations of SDIs, research issues and new and evolvingtechnologies and applications and poster presentations.

  10. Bio-inspired computation in telecommunications

    CERN Document Server

    Yang, Xin-She; Ting, TO

    2015-01-01

    Bio-inspired computation, especially those based on swarm intelligence, has become increasingly popular in the last decade. Bio-Inspired Computation in Telecommunications reviews the latest developments in bio-inspired computation from both theory and application as they relate to telecommunications and image processing, providing a complete resource that analyzes and discusses the latest and future trends in research directions. Written by recognized experts, this is a must-have guide for researchers, telecommunication engineers, computer scientists and PhD students.

  11. Bio-inspired nano-photodiode for Low Light, High Resolution and crosstalk-free CMOS image sensing

    KAUST Repository

    Saffih, Faycal

    2011-05-01

    Previous attempts have been devoted to mimic biological vision intelligence at the architectural system level. In this paper, a novel imitation of biological visual system intelligence is suggested, at the device level with the introduction of novel photodiode morphology. The proposed bio-inspired nanorod photodiode puts the depletion region length on the path of the incident photon instead of on its width, as the case is with the planar photodiodes. The depletion region has a revolving volume to increase the photodiode responsivity, and thus its photosensitivity. In addition, it can virtually boost the pixel fill factor (FF) above the 100% classical limit due to decoupling of its vertical sensing area from its limited planar circuitry area. Furthermore, the suggested nanorod photodiode photosensitivity is analytically proven to be higher than that of the planar photodiode. We also show semi-empirically that the responsivity of the suggested device varies linearly with its height; this important feature has been confirmed using Sentaurus simulation. The proposed nano-photorod is believed to meet the increasingly stringent High-Resolution-Low-Light (HRLL) detection requirements of the camera-phone and biomedical imaging markets. © 2011 IEEE.

  12. Developmentally-inspired shrink-wrap polymers for mechanical induction of tissue differentiation.

    Science.gov (United States)

    Hashmi, Basma; Zarzar, Lauren D; Mammoto, Tadanori; Mammoto, Akiko; Jiang, Amanda; Aizenberg, Joanna; Ingber, Donald E

    2014-05-28

    A biologically inspired thermoresponsive polymer has been developed that mechanically induces tooth differentiation in vitro and in vivo by promoting mesenchymal cell compaction as seen in each pore of the scaffold. This normally occurs during the physiological mesenchymal condensation response that triggers tooth formation in the embryo.

  13. eDNA: A Bio-Inspired Reconfigurable Hardware Cell Architecture Supporting Self-organisation and Self-healing

    DEFF Research Database (Denmark)

    Boesen, Michael Reibel; Madsen, Jan

    2009-01-01

    This paper presents the concept of a biological inspired reconfigurable hardware cell architecture which supports self-organisation and self-healing. Two fundamental processes in biology, namely fertilization-to-birth and cell self-healing have inspired the development of this cell architecture....... In biology as well as in our hardware cell architecture it is the DNA which enables these processes. We propose a platform based on the electronic DNA (eDNA) and show through simulation, its capabilities as a new generation of robust reconfigurable hardware platforms. We have created a Java based simulator...

  14. VFM:Visual Feedback Model for Robust Object Recognition

    Institute of Scientific and Technical Information of China (English)

    王冲; 黄凯奇

    2015-01-01

    Object recognition, which consists of classification and detection, has two important attributes for robustness:1) closeness: detection windows should be as close to object locations as possible, and 2) adaptiveness: object matching should be adaptive to object variations within an object class. It is difficult to satisfy both attributes using traditional methods which consider classification and detection separately; thus recent studies propose to combine them based on confidence contextualization and foreground modeling. However, these combinations neglect feature saliency and object structure, and biological evidence suggests that the feature saliency and object structure can be important in guiding the recognition from low level to high level. In fact, ob ject recognition originates in the mechanism of “what” and “where”pathways in human visual systems. More importantly, these pathways have feedback to each other and exchange useful information, which may improve closeness and adaptiveness. Inspired by the visual feedback, we propose a robust object recognition framework by designing a computational visual feedback model (VFM) between classification and detection. In the “what” feedback, the feature saliency from classification is exploited to rectify detection windows for better closeness;while in the “where” feedback, object parts from detection are used to match object structure for better adaptiveness. Experimental results show that the “what” and “where” feedback is effective to improve closeness and adaptiveness for ob ject recognition, and encouraging improvements are obtained on the challenging PASCAL VOC 2007 dataset.

  15. Biomedical and Clinical Importance of Mussel-Inspired Polymers and Materials.

    Science.gov (United States)

    Kaushik, Nagendra Kumar; Kaushik, Neha; Pardeshi, Sunil; Sharma, Jai Gopal; Lee, Seung Hyun; Choi, Eun Ha

    2015-11-11

    The substance secreted by mussels, also known as nature's glue, is a type of liquid protein that hardens rapidly into a solid water-resistant adhesive material. While in seawater or saline conditions, mussels can adhere to all types of surfaces, sustaining its bonds via mussel adhesive proteins (MAPs), a group of proteins containing 3,4-dihydroxyphenylalanine (DOPA) and catecholic amino acid. Several aspects of this adhesion process have inspired the development of various types of synthetic materials for biomedical applications. Further, there is an urgent need to utilize biologically inspired strategies to develop new biocompatible materials for medical applications. Consequently, many researchers have recently reported bio-inspired techniques and materials that show results similar to or better than those shown by MAPs for a range of medical applications. However, the susceptibility to oxidation of 3,4-dihydroxyphenylalanine poses major challenges with regard to the practical translation of mussel adhesion. In this review, various strategies are discussed to provide an option for DOPA/metal ion chelation and to compensate for the limitations imposed by facile 3,4-dihydroxyphenylalanine autoxidation. We discuss the anti-proliferative, anti-inflammatory, anti-microbial activity, and adhesive behaviors of mussel bio-products and mussel-inspired materials (MIMs) that make them attractive for synthetic adaptation. The development of biologically inspired adhesive interfaces, bioactive mussel products, MIMs, and arising areas of research leading to biomedical applications are considered in this review.

  16. Biomedical and Clinical Importance of Mussel-Inspired Polymers and Materials

    Directory of Open Access Journals (Sweden)

    Nagendra Kumar Kaushik

    2015-11-01

    Full Text Available The substance secreted by mussels, also known as nature’s glue, is a type of liquid protein that hardens rapidly into a solid water-resistant adhesive material. While in seawater or saline conditions, mussels can adhere to all types of surfaces, sustaining its bonds via mussel adhesive proteins (MAPs, a group of proteins containing 3,4-dihydroxyphenylalanine (DOPA and catecholic amino acid. Several aspects of this adhesion process have inspired the development of various types of synthetic materials for biomedical applications. Further, there is an urgent need to utilize biologically inspired strategies to develop new biocompatible materials for medical applications. Consequently, many researchers have recently reported bio-inspired techniques and materials that show results similar to or better than those shown by MAPs for a range of medical applications. However, the susceptibility to oxidation of 3,4-dihydroxyphenylalanine poses major challenges with regard to the practical translation of mussel adhesion. In this review, various strategies are discussed to provide an option for DOPA/metal ion chelation and to compensate for the limitations imposed by facile 3,4-dihydroxyphenylalanine autoxidation. We discuss the anti-proliferative, anti-inflammatory, anti-microbial activity, and adhesive behaviors of mussel bio-products and mussel-inspired materials (MIMs that make them attractive for synthetic adaptation. The development of biologically inspired adhesive interfaces, bioactive mussel products, MIMs, and arising areas of research leading to biomedical applications are considered in this review.

  17. Visualization and Analysis of a Cardio Vascular Disease- and MUPP1-related Biological Network combining Text Mining and Data Warehouse Approaches

    OpenAIRE

    SOMMER, BJÖRN; Tiys, Evgeny S; Kormeier, Benjamin; Hippe, Klaus; Janowski, Sebastian J.; Ivanisenko, Timofey V; Bragin, Anatoly O.; Arrigo, Patrizio; Demenkov, Pavel S; Kochetov, Alexey V.; Ivanisenko, Vladimir A; Kolchanov, Nikolay A.; Hofestädt, Ralf

    2010-01-01

    Detailed investigation of socially important diseases with modern experimental methods has resulted in the generation of large volume of valuable data. However, analysis and interpretation of this data needs application of efficient computational techniques and systems biology approaches. In particular, the techniques allowing the reconstruction of associative networks of various biological objects and events can be useful. In this publication, the combination of different techniques to creat...

  18. INSPIRE and SPIRES Log File Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Adams, Cole; /Wheaton Coll. /SLAC

    2012-08-31

    SPIRES, an aging high-energy physics publication data base, is in the process of being replaced by INSPIRE. In order to ease the transition from SPIRES to INSPIRE it is important to understand user behavior and the drivers for adoption. The goal of this project was to address some questions in regards to the presumed two-thirds of the users still using SPIRES. These questions are answered through analysis of the log files from both websites. A series of scripts were developed to collect and interpret the data contained in the log files. The common search patterns and usage comparisons are made between INSPIRE and SPIRES, and a method for detecting user frustration is presented. The analysis reveals a more even split than originally thought as well as the expected trend of user transition to INSPIRE.

  19. Towards gecko-feet-inspired bandages.

    Science.gov (United States)

    Yanik, Mehmet Fatih

    2009-01-01

    A novel bandage inspired by gecko feet might one day be used during emergencies and internal surgeries. The bandage uses a combination of nanofabricated structures, biodegradable materials and adhesive surface chemistry that allows adhesion onto even wet, moving tissue.

  20. Role of Inspiration in Creating Textile Design

    Directory of Open Access Journals (Sweden)

    Bakhtawer Sabir Malik

    2015-05-01

    Full Text Available In design-making process, Source of inspiration has a vital role, both in defining the characteristics of a new design and in informing the creation of a distinct design. This study was based on the idea to promote creative and original textile designs by using a source of inspiration. The purpose of the study was to create some original and innovative designs for textiles by using natural paintings of William Morris as an inspiration and incorporating modern elements in the design. Several designs were made and three were selected that were innovative and suitable for textile designing. This study marks the significance of a source of inspiration in textile designing.

  1. Biomimetics inspired surfaces for drag reduction and oleophobicity/philicity

    Directory of Open Access Journals (Sweden)

    Bharat Bhushan

    2011-02-01

    Full Text Available The emerging field of biomimetics allows one to mimic biology or nature to develop nanomaterials, nanodevices, and processes which provide desirable properties. Hierarchical structures with dimensions of features ranging from the macroscale to the nanoscale are extremely common in nature and possess properties of interest. There are a large number of objects including bacteria, plants, land and aquatic animals, and seashells with properties of commercial interest. Certain plant leaves, such as lotus (Nelumbo nucifera leaves, are known to be superhydrophobic and self-cleaning due to the hierarchical surface roughness and presence of a wax layer. In addition to a self-cleaning effect, these surfaces with a high contact angle and low contact angle hysteresis also exhibit low adhesion and drag reduction for fluid flow. An aquatic animal, such as a shark, is another model from nature for the reduction of drag in fluid flow. The artificial surfaces inspired from the shark skin and lotus leaf have been created, and in this article the influence of structure on drag reduction efficiency is reviewed. Biomimetic-inspired oleophobic surfaces can be used to prevent contamination of the underwater parts of ships by biological and organic contaminants, including oil. The article also reviews the wetting behavior of oil droplets on various superoleophobic surfaces created in the lab.

  2. Biomimetics inspired surfaces for drag reduction and oleophobicity/philicity.

    Science.gov (United States)

    Bhushan, Bharat

    2011-01-01

    The emerging field of biomimetics allows one to mimic biology or nature to develop nanomaterials, nanodevices, and processes which provide desirable properties. Hierarchical structures with dimensions of features ranging from the macroscale to the nanoscale are extremely common in nature and possess properties of interest. There are a large number of objects including bacteria, plants, land and aquatic animals, and seashells with properties of commercial interest. Certain plant leaves, such as lotus (Nelumbo nucifera) leaves, are known to be superhydrophobic and self-cleaning due to the hierarchical surface roughness and presence of a wax layer. In addition to a self-cleaning effect, these surfaces with a high contact angle and low contact angle hysteresis also exhibit low adhesion and drag reduction for fluid flow. An aquatic animal, such as a shark, is another model from nature for the reduction of drag in fluid flow. The artificial surfaces inspired from the shark skin and lotus leaf have been created, and in this article the influence of structure on drag reduction efficiency is reviewed. Biomimetic-inspired oleophobic surfaces can be used to prevent contamination of the underwater parts of ships by biological and organic contaminants, including oil. The article also reviews the wetting behavior of oil droplets on various superoleophobic surfaces created in the lab.

  3. Inspirational Catalogue of Master Thesis Proposals 2015

    DEFF Research Database (Denmark)

    Thorndahl, Søren

    2015-01-01

    This catalog presents different topics for master thesis projects. It is important to emphasize that the project descriptions only serves as an inspiration and that you always can discuss with the potential supervisors the specific contents of a project.......This catalog presents different topics for master thesis projects. It is important to emphasize that the project descriptions only serves as an inspiration and that you always can discuss with the potential supervisors the specific contents of a project....

  4. Visual Signs of Ageing

    Directory of Open Access Journals (Sweden)

    Helle Rexbye

    2007-07-01

    Full Text Available Consumer culture has placed the ageing body in a dilemma of representation. Physical appearance has become increasingly important as a symbol of identity, and at the same time society idealizes youth. This study explores visual ageing empirically. By using photographs of older persons (70+ as starting point, it is explored how visual age is assessed and interpreted. It is shown that informants read age in a spread of stages and categories. Main age indicators are biological markers: skin, eyes, and hair colour, but supplemented by vigour, style, and grooming. Furthermore, in-depth interviews indicate that visual age is mainly interpreted into categories and moral regulations rooted in early modernity. Subsequently the question of a postmodern perspective of visual ageing is discussed in this article. The empirical findings in the study question a postmodern fluidity of visual signs – at least when the concern is signs of ageing.

  5. Combining supramolecular chemistry with biology.

    Science.gov (United States)

    Uhlenheuer, Dana A; Petkau, Katja; Brunsveld, Luc

    2010-08-01

    Supramolecular chemistry has primarily found its inspiration in biological molecules, such as proteins and lipids, and their interactions. Currently the supramolecular assembly of designed compounds can be controlled to great extent. This provides the opportunity to combine these synthetic supramolecular elements with biomolecules for the study of biological phenomena. This tutorial review focuses on the possibilities of the marriage of synthetic supramolecular architectures and biological systems. It highlights that synthetic supramolecular elements are for example ideal platforms for the recognition and modulation of proteins and cells. The unique features of synthetic supramolecular systems with control over size, shape, valency, and interaction strength allow the generation of structures fitting the demands to approach the biological problems at hand. Supramolecular chemistry has come full circle, studying the biology and its molecules which initially inspired its conception.

  6. INSPIRE from the JRC Point of View

    Directory of Open Access Journals (Sweden)

    Vlado Cetl

    2012-12-01

    Full Text Available This paper summarises some recent developments in INSPIRE implementation from the JRC (Joint Research Centre point of view. The INSPIRE process started around 11 years ago and today, clear results and benefits can be seen. Spatial data are more accessible and shared more frequently between countries and at the European level. In addition to this, efficient, unified coordination and collaboration between different stakeholders and participants has been achieved, which is another great success. The JRC, as a scientific think-tank of the European Commission, has played a very important role in this process from the very beginning. This role is in line with its mission, which is to provide customer-driven scientific and technical support for the conception, development, implementation and monitoring of European Union (EU policies. The JRC acts as the overall technical coordinator of INSPIRE, but it also carries out the activities necessary to support the coherent implementation of INSPIRE, by helping member states in the implementation process. Experiences drawn from collaboration and negotiation in each country and at the European level will be of great importance in the revision of the INSPIRE Directive, which is envisaged for 2014. Keywords: spatial data infrastructure (SDI; INSPIRE; development; Joint Research Centre (JRC

  7. Designing synthetic biology.

    Science.gov (United States)

    Agapakis, Christina M

    2014-03-21

    Synthetic biology is frequently defined as the application of engineering design principles to biology. Such principles are intended to streamline the practice of biological engineering, to shorten the time required to design, build, and test synthetic gene networks. This streamlining of iterative design cycles can facilitate the future construction of biological systems for a range of applications in the production of fuels, foods, materials, and medicines. The promise of these potential applications as well as the emphasis on design has prompted critical reflection on synthetic biology from design theorists and practicing designers from many fields, who can bring valuable perspectives to the discipline. While interdisciplinary connections between biologists and engineers have built synthetic biology via the science and the technology of biology, interdisciplinary collaboration with artists, designers, and social theorists can provide insight on the connections between technology and society. Such collaborations can open up new avenues and new principles for research and design, as well as shed new light on the challenging context-dependence-both biological and social-that face living technologies at many scales. This review is inspired by the session titled "Design and Synthetic Biology: Connecting People and Technology" at Synthetic Biology 6.0 and covers a range of literature on design practice in synthetic biology and beyond. Critical engagement with how design is used to shape the discipline opens up new possibilities for how we might design the future of synthetic biology.

  8. Visual agnosia.

    Science.gov (United States)

    Álvarez, R; Masjuan, J

    2016-03-01

    Visual agnosia is defined as an impairment of object recognition, in the absence of visual acuity or cognitive dysfunction that would explain this impairment. This condition is caused by lesions in the visual association cortex, sparing primary visual cortex. There are 2 main pathways that process visual information: the ventral stream, tasked with object recognition, and the dorsal stream, in charge of locating objects in space. Visual agnosia can therefore be divided into 2 major groups depending on which of the two streams is damaged. The aim of this article is to conduct a narrative review of the various visual agnosia syndromes, including recent developments in a number of these syndromes.

  9. Spontaneous water filtration of bio-inspired membrane

    Science.gov (United States)

    Kim, Kiwoong; Kim, Hyejeong; Lee, Sang Joon

    2016-11-01

    Water is one of the most important elements for plants, because it is essential for various metabolic activities. Thus, water management systems of vascular plants, such as water collection and water filtration have been optimized through a long history. In this view point, bio-inspired technologies can be developed by mimicking the nature's strategies for the survival of the fittest. However, most of the underlying biophysical features of the optimized water management systems remain unsolved In this study, the biophysical characteristics of water filtration phenomena in the roots of mangrove are experimentally investigated. To understand water-filtration features of the mangrove, the morphological structures of its roots are analyzed. The electrokinetic properties of the root surface are also examined. Based on the quantitatively analyzed information, filtration of sodium ions in the roots are visualized. Motivated by this mechanism, spontaneous desalination mechanism in the root of mangrove is proposed by combining the electrokinetics and hydrodynamic transportation of ions. This study would be helpful for understanding the water-filtration mechanism of the roots of mangrove and developing a new bio-inspired desalination technology. This research was financially supported by the National Research Foundation (NRF) of Korea (Contract Grant Number: 2008-0061991).

  10. Autonomous UAV persistent surveillance using bio-inspired strategies

    Science.gov (United States)

    Burman, Jerry; Hespanha, Joao; Madhow, Upamanyu; Isaacs, Jason; Venkateswaran, Sriram; Pham, Tien

    2012-06-01

    A team consisting of Teledyne Scientific Company, the University of California at Santa Barbara, the Army Research Laboratory, the Engineer Research and Development Center, and IBM UK is developing technologies in support of automated data exfiltration from heterogeneous battlefield sensor networks to enhance situational awareness for dismounts and command echelons. Unmanned aerial vehicles (UAV) provide an effective means to autonomously collect data from a sparse network of unattended ground sensors (UGSs) that cannot communicate with each other. UAVs are used to reduce the system reaction time by generating autonomous collection routes that are data-driven. Bioinspired techniques for autonomous search provide a novel strategy to detect, capture and fuse data from heterogeneous sensor networks. The bio-inspired algorithm is based on chemotaxis or the motion of bacteria seeking nutrients in their environment. Field tests of a bio-inspired system that routed UAVs were conducted in June 2011 at Camp Roberts, CA. The field test results showed that such a system can autonomously detect and locate the source of terrestrial events with very high accuracy and visually verify the event. In June 2011, field tests of the system were completed and include the use of multiple autonomously controlled UAVs, detection and disambiguation of multiple acoustic events occurring in short time frames, optimal sensor placement based on local phenomenology and the use of the International Technology Alliance (ITA) Sensor Network Fabric. The system demonstrated TRL 6 performance in the field at Camp Roberts.

  11. Bio-inspired artificial iriodphores based on capillary origami

    Science.gov (United States)

    Manakasettharn, Supone; Taylor, J. Ashley; Krupenkin, Tom

    2011-03-01

    Many marine organisms have evolved complex optical mechanisms of dynamic skin color control that allow them to drastically change their visual appearance. In particular, cephalopods have developed especially effective dynamic color control mechanism based on the mechanical actuation of the micro-scale optical structures, which produce either variable degrees of area coverage by a given color (chromatophores) or variations in spatial orientation of the reflective and diffractive surfaces (iridophores). In this work we describe bio-inspired artificial iridophores based on electrowetting-controlled capillary origami. We describe the developed microfabrication approach, characterize mechanical and optical properties of the obtained microstructures and discuss their electrowetting-based actuation. The obtained experimental results are in good agreement with a simple theoretical model based on electrocapillarity and elasticity theory. The results of the work can enable a broad range of novel optical devices.

  12. Measurement of the flow past a cactus-inspired cylinder

    Science.gov (United States)

    Oweis, Ghanem F.; El-Makdah, Adnan M.

    2012-11-01

    Desert cacti are tall cylindrical plants characterized by longitudinal u- or v-shaped grooves that run parallel to the plant axis, covering its surface area. We study the wake flow modifications resulting from the introduction of cactus-inspired surface grooves to a circular cylinder. Particle image velocimetry PIV is implemented in a wind tunnel to visualize and quantify the wake flow from a cactus cylinder in cross wind and an equivalent circular cylinder at Re O(1E5). The cactus wake exhibits superior behavior over its circular counterpart as seen from the mean and turbulent velocity profiles. The surface flow within the grooves is also probed to elucidate the origins of the wake alterations. Lastly, we use simple statistical analysis based only on the wake velocity fields, under the assumption of periodicity of the shedding, to recover the time varying flow from the randomly acquired PIV snapshots.

  13. Visual Processing of Biological Motion in Children and Adolescents with Attention-Deficit/Hyperactivity Disorder: An Event Related Potential-Study

    Science.gov (United States)

    Kröger, Anne; Hof, Katharina; Krick, Christoph; Siniatchkin, Michael; Jarczok, Tomasz; Freitag, Christine M.; Bender, Stephan

    2014-01-01

    Attention-deficit/hyperactivity disorder (ADHD) is often accompanied by problems in social behaviour, which are sometimes similar to some symptoms of autism-spectrum disorders (ASD). However, neuronal mechanisms of ASD-like deficits in ADHD have rarely been studied. The processing of biological motion–recently discussed as a marker of social cognition–was found to be disrupted in ASD in several studies. Thus in the present study we tested if biological motion processing is disrupted in ADHD. We used 64-channel EEG and spatio-temporal source analysis to assess event-related potentials associated with human motion processing in 21 children and adolescents with ADHD and 21 matched typically developing controls. On the behavioural level, all subjects were able to differentiate between human and scrambled motion. But in response to both scrambled and biological motion, the N200 amplitude was decreased in subjects with ADHD. After a spatio-temporal dipole analysis, a human motion specific activation was observable in occipital-temporal regions with a reduced and more diffuse activation in ADHD subjects. These results point towards neuronal determined alterations in the processing of biological motion in ADHD. PMID:24520402

  14. Visual processing of biological motion in children and adolescents with attention-deficit/hyperactivity disorder: an event related potential-study.

    Directory of Open Access Journals (Sweden)

    Anne Kröger

    Full Text Available Attention-deficit/hyperactivity disorder (ADHD is often accompanied by problems in social behaviour, which are sometimes similar to some symptoms of autism-spectrum disorders (ASD. However, neuronal mechanisms of ASD-like deficits in ADHD have rarely been studied. The processing of biological motion-recently discussed as a marker of social cognition-was found to be disrupted in ASD in several studies. Thus in the present study we tested if biological motion processing is disrupted in ADHD. We used 64-channel EEG and spatio-temporal source analysis to assess event-related potentials associated with human motion processing in 21 children and adolescents with ADHD and 21 matched typically developing controls. On the behavioural level, all subjects were able to differentiate between human and scrambled motion. But in response to both scrambled and biological motion, the N200 amplitude was decreased in subjects with ADHD. After a spatio-temporal dipole analysis, a human motion specific activation was observable in occipital-temporal regions with a reduced and more diffuse activation in ADHD subjects. These results point towards neuronal determined alterations in the processing of biological motion in ADHD.

  15. Visual art and visual perception

    NARCIS (Netherlands)

    Koenderink, Jan J.

    2015-01-01

    Visual art and visual perception ‘Visual art’ has become a minor cul-de-sac orthogonal to THE ART of the museum directors and billionaire collectors. THE ART is conceptual, instead of visual. Among its cherished items are the tins of artist’s shit (Piero Manzoni, 1961, Merda d’Artista) “worth their

  16. Google Earth: Inspiration and Instrument for the Study of Ancient Civilizations

    OpenAIRE

    Jaroslav Klokočník; Jan Kostelecký; Karel Pavelka

    2011-01-01

    Satellite imaging is well known as a useful tool in many scientific disciplines and various applications.  Google Earth, with its free access, is now - thanks to increasing resolution and precision - such a tool. It can be very inspiring. It improves the visualization and dissemination of scientific data, and opens doors to new discoveries. For example, many Nasca geoglyphs are now visible to Google Earth and so are the orientations of Chinese pyramids, which appear to be laid out with the ai...

  17. Flow visualization

    CERN Document Server

    Merzkirch, Wolfgang

    1974-01-01

    Flow Visualization describes the most widely used methods for visualizing flows. Flow visualization evaluates certain properties of a flow field directly accessible to visual perception. Organized into five chapters, this book first presents the methods that create a visible flow pattern that could be investigated by visual inspection, such as simple dye and density-sensitive visualization methods. It then deals with the application of electron beams and streaming birefringence. Optical methods for compressible flows, hydraulic analogy, and high-speed photography are discussed in other cha

  18. Visualization and analysis of a cardio vascular disease- and MUPP1-related biological network combining text mining and data warehouse approaches.

    Science.gov (United States)

    Sommer, Björn; Tiys, Evgeny S; Kormeier, Benjamin; Hippe, Klaus; Janowski, Sebastian J; Ivanisenko, Timofey V; Bragin, Anatoly O; Arrigo, Patrizio; Demenkov, Pavel S; Kochetov, Alexey V; Ivanisenko, Vladimir A; Kolchanov, Nikolay A; Hofestädt, Ralf

    2010-11-11

    Detailed investigation of socially important diseases with modern experimental methods has resulted in the generation of large volume of valuable data. However, analysis and interpretation of this data needs application of efficient computational techniques and systems biology approaches. In particular, the techniques allowing the reconstruction of associative networks of various biological objects and events can be useful. In this publication, the combination of different techniques to create such a network associated with an abstract cell environment is discussed in order to gain insights into the functional as well as spatial interrelationships. It is shown that experimentally gained knowledge enriched with data warehouse content and text mining data can be used for the reconstruction and localization of a cardiovascular disease developing network beginning with MUPP1/MPDZ (multi-PDZ domain protein).

  19. Visual Testing: Searching for Guidelines.

    Science.gov (United States)

    Van Gendt, Kitty; Verhagen, Plon

    An experiment was conducted to investigate the influence of the variables "realism" and "context" on the performance of biology students on a visual test about the anatomy of a rat. The instruction was primarily visual with additional verbal information like Latin names and practical information about the learning task: dissecting a rat to gain…

  20. Biological physics--origin and perspectives.

    Science.gov (United States)

    Sackmann, Erich

    2002-03-12

    Biology and Physics share common ancestors. The two sciences have drifted apart during the last century, although they have often mutually fertilized each other. Often the discovery of a new physical method has triggered dramatic progresses in biology but there are also numerous examples of biology-inspired new developments in physics. In this special issue of ChemPhysChem, various facets and new developments of the interface between physics and biology are pointed out.

  1. Carpe Diem: Seizing the Common Core with Visual Thinking Strategies in the Visual Arts Classroom

    Science.gov (United States)

    Franco, Mary; Unrath, Kathleen

    2014-01-01

    This article demonstrates how Visual Thinking Strategies (VTS) art discussions and subsequent, inspired artmaking can help reach the goals of the Common Core State Standards for English Language Arts & Literacy in History/Social Studies, Science, & Technical Subjects (CCSS-ELA). The authors describe how this was achieved in a remedial…

  2. Astrophysics of extreme mass ratio inspiral sources

    CERN Document Server

    Hopman, C

    2007-01-01

    Compact remnants on orbits with peri-apses close to the Schwarzschild radius of a massive black hole (MBH) lose orbital energy by emitting gravitational waves (GWs) and spiral in. Scattering with other stars allows successful inspiral of such extreme mass ratio inspiral sources (EMRIs) only within small distances, a < few \\times 0.01 pc from the MBH. The event rate of EMRIs is therefore dominated by the stellar dynamics and content in the inner few \\times 0.01 pc. I discuss the relevant dynamical aspects and resulting estimated event rates of EMRIs. Subjects considered include the loss-cone treatment of inspiral sources; mass segregation; resonant relaxation; and alternative routes to EMRI formation such as tidal binary disruptions, stellar formation in disks and tidal capture of massive main sequence stars. The EMRI event rate is estimated to be of order few \\times 10^2/Gyr per MBH, giving excellent prospects for observation by LISA.

  3. String and string-inspired phenomenology

    CERN Document Server

    López, J L

    1994-01-01

    In these lectures I review the progress made over the last few years in the subject of string and string-inspired phenomenology. I take a practical approach, thereby concentrating more on explicit examples rather than on formal developments. Topics covered include: introduction to string theory the free-fermionic formulation and its general features, generic conformal field theory properties, SU(5)\\times U(1) GUT and string model-building, supersymmetry breaking, the bottom-up approach to string-inspired models, radiative electroweak symmetry breaking, the determination of the allowed parameter space of supergravity models and the experimental constraints on this class of models, and prospects for direct and indirect tests of string-inspired models. (Lectures delivered at the XXII ITEP International Winter School of Physics, Moscow, Russia, February 22 -- March 2, 1994)

  4. Nature-inspired computation in engineering

    CERN Document Server

    2016-01-01

    This timely review book summarizes the state-of-the-art developments in nature-inspired optimization algorithms and their applications in engineering. Algorithms and topics include the overview and history of nature-inspired algorithms, discrete firefly algorithm, discrete cuckoo search, plant propagation algorithm, parameter-free bat algorithm, gravitational search, biogeography-based algorithm, differential evolution, particle swarm optimization and others. Applications include vehicle routing, swarming robots, discrete and combinatorial optimization, clustering of wireless sensor networks, cell formation, economic load dispatch, metamodeling, surrogated-assisted cooperative co-evolution, data fitting and reverse engineering as well as other case studies in engineering. This book will be an ideal reference for researchers, lecturers, graduates and engineers who are interested in nature-inspired computation, artificial intelligence and computational intelligence. It can also serve as a reference for relevant...

  5. Compact and Thermosensitive Nature-inspired Micropump

    Science.gov (United States)

    Kim, Hyejeong; Kim, Kiwoong; Lee, Sang Joon

    2016-10-01

    Liquid transportation without employing a bulky power source, often observed in nature, has been an essential prerequisite for smart applications of microfluidic devices. In this report, a leaf-inspired micropump (LIM) which is composed of thermo-responsive stomata-inspired membrane (SIM) and mesophyll-inspired agarose cryogel (MAC) is proposed. The LIM provides a durable flow rate of 30 μl/h · cm2 for more than 30 h at room temperature without external mechanical power source. By adapting a thermo-responsive polymer, the LIM can smartly adjust the delivery rate of a therapeutic liquid in response to temperature changes. In addition, as the LIM is compact, portable, and easily integrated into any liquid, it might be utilized as an essential component in advanced hand-held drug delivery devices.

  6. Information Theory in Scientific Visualization

    Directory of Open Access Journals (Sweden)

    Chaoli Wang

    2011-01-01

    Full Text Available In recent years, there is an emerging direction that leverages information theory to solve many challenging problems in scientific data analysis and visualization. In this article, we review the key concepts in information theory, discuss how the principles of information theory can be useful for visualization, and provide specific examples to draw connections between data communication and data visualization in terms of how information can be measured quantitatively. As the amount of digital data available to us increases at an astounding speed, the goal of this article is to introduce the interested readers to this new direction of data analysis research, and to inspire them to identify new applications and seek solutions using information theory.

  7. Innovation inspired by nature: capabilities, potentials, and challenges

    Science.gov (United States)

    Bar-Cohen, Yoseph

    2012-10-01

    Through evolution, nature came up with many effective solutions to its challenges and continually improving them. By mimicking, coping and being inspired, humans have been using Nature's solutions to address their own challenges. In recent years, the implementation of nature's capabilities has intensified with our growing understanding of the various biological and nastic mechanisms and processes. Successes include even the making of humanlike robots that perform such lifelike tasks as walking, talking, making eye-contact, interpreting speech and facial expressions, as well as many other humanlike functions. Generally, once humans are able to implement a function then, thru rapid advances in technology, capabilities are developed that can significantly exceed the original source of inspiration in Nature. Examples include flight where there is no species that can fly as high, carry so much mass, has so large dimensions and fly so fast, and operate at as such extreme conditions as our aircraft and other aerospace systems. However, using the capabilities of today's technology, there are many challenges that are not feasible to address in mimicking characteristics of species and plants. In this manuscript, state-of-the-art of biomimetic capabilities, potentials and challenges are reviewed.

  8. Innovation Inspired by Nature: Capabilities, Potentials and Challenges

    Science.gov (United States)

    Bar-Cohen, Yoseph

    2012-01-01

    Through evolution, nature came up with many effective solutions to its challenges and continually improving them. By mimicking, coping and being inspired, humans have been using Nature's solutions to address their own challenges. In recent years, the implementation of nature's capabilities has intensified with our growing understanding of the various biological and nastic mechanisms and processes. Successes include even the making of humanlike robots that perform such lifelike tasks as walking, talking, making eye-contact, interpreting speech and facial expressions, as well as many other humanlike functions. Generally, once humans are able to implement a function then, thru rapid advances in technology, capabilities are developed that can significantly exceed the original source of inspiration in Nature. Examples include flight where there is no species that can fly as high, carry so much mass, has so large dimensions and fly so fast, and operate at as such extreme conditions as our aircraft and other aerospace systems. However, using the capabilities of today's technology, there are many challenges that are not feasible to address in mimicking characteristics of species and plants. In this manuscript, state-of-the-art of biomimetic capabilities, potentials and challenges are reviewed.

  9. Multi-objective optimization of aerostructures inspired by nature

    Science.gov (United States)

    Kearney, Adam C.

    The focus of this doctoral work is on the optimization of aircraft wing structures. The optimization was performed against the shape, size and topology of simple aircraft wing designs. A simple morphing wing actuator optimization is performed as well as a wing panel buckling topology optimization. This is done with biologically-inspired mathematical systems including a map L-system, a multi-objective genetic algorithm, and cellular structures represented by Voronoi diagrams. As with most aircraft optimizations, both studies aim to minimize the total weight of a wing while simultaneously meeting stiffness and strength requirements. Optimization is performed with the scripts developed in MATLAB as well as through the use of finite element codes, NASTRAN and LS-Dyna. The intent of this methodology is to develop unique designs inspired by nature and optimized through natural selection. The optimal designs are those with minimal weight as well as additional requirements specific to the problems. The designs and methodology have the potential to be of use in determining minimum weight designs in aircraft structures. A literature review of optimization techniques, methodology and method validation, and optimization comparisons is presented. The buckling panel optimization considered here also includes composite buckling failure and manufacturing assumptions for composite panels. The panels are optimized for mass and strength by controlling the laminate stacking sequence, stiffener size, and topology. The morphing wing is optimized for actuator loading and redundancy.

  10. Electronic and optoelectronic materials and devices inspired by nature

    Science.gov (United States)

    Meredith, P.; Bettinger, C. J.; Irimia-Vladu, M.; Mostert, A. B.; Schwenn, P. E.

    2013-03-01

    Inorganic semiconductors permeate virtually every sphere of modern human existence. Micro-fabricated memory elements, processors, sensors, circuit elements, lasers, displays, detectors, etc are ubiquitous. However, the dawn of the 21st century has brought with it immense new challenges, and indeed opportunities—some of which require a paradigm shift in the way we think about resource use and disposal, which in turn directly impacts our ongoing relationship with inorganic semiconductors such as silicon and gallium arsenide. Furthermore, advances in fields such as nano-medicine and bioelectronics, and the impending revolution of the ‘ubiquitous sensor network’, all require new functional materials which are bio-compatible, cheap, have minimal embedded manufacturing energy plus extremely low power consumption, and are mechanically robust and flexible for integration with tissues, building structures, fabrics and all manner of hosts. In this short review article we summarize current progress in creating materials with such properties. We focus primarily on organic and bio-organic electronic and optoelectronic systems derived from or inspired by nature, and outline the complex charge transport and photo-physics which control their behaviour. We also introduce the concept of electrical devices based upon ion or proton flow (‘ionics and protonics’) and focus particularly on their role as a signal interface with biological systems. Finally, we highlight recent advances in creating working devices, some of which have bio-inspired architectures, and summarize the current issues, challenges and potential solutions. This is a rich new playground for the modern materials physicist.

  11. Visual Servoing

    OpenAIRE

    Chaumette, Francois; Hutchinson, Seth; Corke, Peter

    2016-01-01

    International audience; This chapter introduces visual servo control, using computer vision data in the servo loop to control the motion of a robot. We first describe the basic techniques that are by now well established in the field. We give a general overview of the formulation of the visual servo control problem, and describe the two archetypal visual servo control schemes: image-based and pose-based visual servo control. We then discuss performance and stability issues that pertain to the...

  12. A hierarchical model of goal directed navigation selects trajectories in a visual environment.

    Science.gov (United States)

    Erdem, Uğur M; Milford, Michael J; Hasselmo, Michael E

    2015-01-01

    We have developed a Hierarchical Look-Ahead Trajectory Model (HiLAM) that incorporates the firing pattern of medial entorhinal grid cells in a planning circuit that includes interactions with hippocampus and prefrontal cortex. We show the model's flexibility in representing large real world environments using odometry information obtained from challenging video sequences. We acquire the visual data from a camera mounted on a small tele-operated vehicle. The camera has a panoramic field of view with its focal point approximately 5 cm above the ground level, similar to what would be expected from a rat's point of view. Using established algorithms for calculating perceptual speed from the apparent rate of visual change over time, we generate raw dead reckoning information which loses spatial fidelity over time due to error accumulation. We rectify the loss of fidelity by exploiting the loop-closure detection ability of a biologically inspired, robot navigation model termed RatSLAM. The rectified motion information serves as a velocity input to the HiLAM to encode the environment in the form of grid cell and place cell maps. Finally, we show goal directed path planning results of HiLAM in two different environments, an indoor square maze used in rodent experiments and an outdoor arena more than two orders of magnitude larger than the indoor maze. Together these results bridge for the first time the gap between higher fidelity bio-inspired navigation models (HiLAM) and more abstracted but highly functional bio-inspired robotic mapping systems (RatSLAM), and move from simulated environments into real-world studies in rodent-sized arenas and beyond.

  13. Adaptive Bio-Inspired Wireless Network Routing for Planetary Surface Exploration

    Science.gov (United States)

    Alena, Richard I.; Lee, Charles

    2004-01-01

    Wireless mobile networks suffer connectivity loss when used in a terrain that has hills, and valleys when line of sight is interrupted or range is exceeded. To resolve this problem and achieve acceptable network performance, we have designed an adaptive, configurable, hybrid system to automatically route network packets along the best path between multiple geographically dispersed modules. This is very useful in planetary surface exploration, especially for ad-hoc mobile networks, where computational devices take an active part in creating a network infrastructure, and can actually be used to route data dynamically and even store data for later transmission between networks. Using inspiration from biological systems, this research proposes to use ant trail algorithms with multi-layered information maps (topographic maps, RF coverage maps) to determine the best route through ad-hoc network at real time. The determination of best route is a complex one, and requires research into the appropriate metrics, best method to identify the best path, optimizing traffic capacity, network performance, reliability, processing capabilities and cost. Real ants are capable of finding the shortest path from their nest to a food source without visual sensing through the use of pheromones. They are also able to adapt to changes in the environment using subtle clues. To use ant trail algorithms, we need to define the probability function. The artificial ant is, in this case, a software agent that moves from node to node on a network graph. The function to calculate the fitness (evaluate the better path) includes: length of the network edge, the coverage index, topology graph index, and pheromone trail left behind by other ant agents. Each agent modifies the environment in two different ways: 1) Local trail updating: As the ant moves between nodes it updates the amount of pheromone on the edge; and 2) Global trail updating: When all ants have completed a tour the ant that found the

  14. Data visualization

    CERN Document Server

    Azzam, Tarek

    2013-01-01

    Do you communicate data and information to stakeholders? In Part 1, we introduce recent developments in the quantitative and qualitative data visualization field and provide a historical perspective on data visualization, its potential role in evaluation practice, and future directions. Part 2 delivers concrete suggestions for optimally using data visualization in evaluation, as well as suggestions for best practices in data visualization design. It focuses on specific quantitative and qualitative data visualization approaches that include data dashboards, graphic recording, and geographic information systems (GIS). Readers will get a step-by-step process for designing an effective data dashboard system for programs and organizations, and various suggestions to improve their utility.

  15. Visual guidance based on optic flow: a biorobotic approach.

    Science.gov (United States)

    Franceschini, Nicolas

    2004-01-01

    This paper addresses some basic questions as to how vision links up with action and serves to guide locomotion in both biological and artificial creatures. The thorough knowledge gained during the past five decades on insects' sensory-motor abilities and the neuronal substrates involved has provided us with a rich source of inspiration for designing tomorrow's self-guided vehicles and micro-vehicles, which will be able to cope with unforeseen events on the ground, under water, in the air, in space, on other planets, and inside the human body. Insects can teach us some useful tricks for designing agile autonomous robots. Since constructing a "biorobot" first requires exactly formulating the biological principles presumably involved, it gives us a unique opportunity of checking the soundness and robustness of these principles by bringing them face to face with the real physical world. "Biorobotics" therefore goes one step beyond computer simulation. It leads to experimenting with real physical robots which have to pass the stringent test of the real world. Biorobotics provide us with a new tool, which can help neurobiologists and neuroethologists to identify and investigate worthwhile issues in the field of sensory-motor control. Here we describe some of the visually guided terrestrial and aerial robots we have developed since 1985 on the basis of our biological findings. All these robots behave in response to the optic flow, i.e., they work by measuring the slip speed of the retinal image. Optic flow is sensed on-board by miniature electro-optical velocity sensors. The very principle of these sensors was based on studies in which we recorded the responses of single identified neurons to single photoreceptor stimulation in a model visual system: the fly's compound eye.

  16. Optic flow estimation on trajectories generated by bio-inspired closed-loop flight.

    Science.gov (United States)

    Shoemaker, Patrick A; Hyslop, Andrew M; Humbert, J Sean

    2011-05-01

    We generated panoramic imagery by simulating a fly-like robot carrying an imaging sensor, moving in free flight through a virtual arena bounded by walls, and containing obstructions. Flight was conducted under closed-loop control by a bio-inspired algorithm for visual guidance with feedback signals corresponding to the true optic flow that would be induced on an imager (computed by known kinematics and position of the robot relative to the environment). The robot had dynamics representative of a housefly-sized organism, although simplified to two-degree-of-freedom flight to generate uniaxial (azimuthal) optic flow on the retina in the plane of travel. Surfaces in the environment contained images of natural and man-made scenes that were captured by the moving sensor. Two bio-inspired motion detection algorithms and two computational optic flow estimation algorithms were applied to sequences of image data, and their performance as optic flow estimators was evaluated by estimating the mutual information between outputs and true optic flow in an equatorial section of the visual field. Mutual information for individual estimators at particular locations within the visual field was surprisingly low (less than 1 bit in all cases) and considerably poorer for the bio-inspired algorithms that the man-made computational algorithms. However, mutual information between weighted sums of these signals and comparable sums of the true optic flow showed significant increases for the bio-inspired algorithms, whereas such improvement did not occur for the computational algorithms. Such summation is representative of the spatial integration performed by wide-field motion-sensitive neurons in the third optic ganglia of flies.

  17. Nature inspires sensors to do more with less.

    Science.gov (United States)

    Mulvaney, Shawn P; Sheehan, Paul E

    2014-10-28

    The world is filled with widely varying chemical, physical, and biological stimuli. Over millennia, organisms have refined their senses to cope with these diverse stimuli, becoming virtuosos in differentiating closely related antigens, handling extremes in concentration, resetting the spent sensing mechanisms, and processing the multiple data streams being generated. Nature successfully deals with both repeating and new stimuli, demonstrating great adaptability when confronted with the latter. Interestingly, nature accomplishes these feats using a fairly simple toolbox. The sensors community continues to draw inspiration from nature's example: just look at the antibodies used as biosensor capture agents or the neural networks that process multivariate data streams. Indeed, many successful sensors have been built by simply mimicking natural systems. However, some of the most exciting breakthroughs occur when the community moves beyond mimicking nature and learns to use nature's tools in innovative ways.

  18. Supramolecular polymer adhesives: advanced materials inspired by nature.

    Science.gov (United States)

    Heinzmann, Christian; Weder, Christoph; de Espinosa, Lucas Montero

    2016-01-21

    Due to their dynamic, stimuli-responsive nature, non-covalent interactions represent versatile design elements that can be found in nature in many molecular processes or materials, where adaptive behavior or reversible connectivity is required. Examples include molecular recognition processes, which trigger biological responses or cell-adhesion to surfaces, and a broad range of animal secreted adhesives with environment-dependent properties. Such advanced functionalities have inspired researchers to employ similar design approaches for the development of synthetic polymers with stimuli-responsive properties. The utilization of non-covalent interactions for the design of adhesives with advanced functionalities such as stimuli responsiveness, bonding and debonding on demand capability, surface selectivity or recyclability is a rapidly emerging subset of this field, which is summarized in this review.

  19. Bio-Inspired Extreme Wetting Surfaces for Biomedical Applications

    Directory of Open Access Journals (Sweden)

    Sera Shin

    2016-02-01

    Full Text Available Biological creatures with unique surface wettability have long served as a source of inspiration for scientists and engineers. More specifically, materials exhibiting extreme wetting properties, such as superhydrophilic and superhydrophobic surfaces, have attracted considerable attention because of their potential use in various applications, such as self-cleaning fabrics, anti-fog windows, anti-corrosive coatings, drag-reduction systems, and efficient water transportation. In particular, the engineering of surface wettability by manipulating chemical properties and structure opens emerging biomedical applications ranging from high-throughput cell culture platforms to biomedical devices. This review describes design and fabrication methods for artificial extreme wetting surfaces. Next, we introduce some of the newer and emerging biomedical applications using extreme wetting surfaces. Current challenges and future prospects of the surfaces for potential biomedical applications are also addressed.

  20. Innovative Didactics in an International Internship - inspiration

    DEFF Research Database (Denmark)

    Lembcke, Steen; Skibsted, Else Bengaard; Mølgaard, Niels

    An inspiration handbook for the international team from the teacher education programme in VIA. Aimed to assist internship supervisors and students during international internships in regards to innovation, social entrepreneurship and development of the international teacher. Introduces why and how...... to work with innovation and entrepreneurship....

  1. Water Treatment Technologies Inspire Healthy Beverages

    Science.gov (United States)

    2013-01-01

    Mike Johnson, a former technician at Johnson Space Center, drew on his expertise as a wastewater engineer to create a line of kombucha-based probiotic drinks. Unpeeled Inc., based in Minneapolis-St. Paul, Minnesota, employs 12 people and has sold more than 6 million units of its NASA-inspired beverage.

  2. Pop Art--Inspired Self-Portraits

    Science.gov (United States)

    Goodwin, Donna J.

    2011-01-01

    In this article, the author describes an art lesson that was inspired by Andy Warhol's mass-produced portraits. Warhol began his career as a graphic artist and illustrator. His artwork was a response to the redundancy of the advertising images put in front of the American public. Celebrities and famous people in magazines and newspapers were seen…

  3. Inspired by Athletes, Myths, and Poets

    Science.gov (United States)

    Melvin, Samantha

    2010-01-01

    Tales of love and hate, of athleticism, heroism, devotion to gods and goddesses that influenced myth and culture are a way of sharing ancient Greece's rich history. In this article, the author describes how her students created their own Greek-inspired clay vessels as artifacts of their study. (Contains 6 online resources.)

  4. Inspirational catalogue of Master Thesis proposals 2014

    DEFF Research Database (Denmark)

    This catalog presents different topics for master thesis projects. It is important to emphasize that the project descriptions only serves as an inspiration and that you always can discuss with the potential supervisors the specific contents of a project. If you have an idea for a project which...

  5. Inspiration and the Texts of the Bible

    Directory of Open Access Journals (Sweden)

    Dirk Buchner

    1997-01-01

    Full Text Available This article seeks to explore what the inspired text of the Old Testament was as it existed for the New Testament authors, particularly for the author of the book of Hebrews. A quick look at the facts makes. it clear that there was, at the time, more than one 'inspired' text, among these were the Septuagint and the Masoretic Text 'to name but two'. The latter eventually gained ascendancy which is why it forms the basis of our translated Old Testament today. Yet we have to ask: what do we make of that other text that was the inspired Bible to the early Church, especially to the writer of the book of Hebrews, who ignored the Masoretic text? This article will take a brief look at some suggestions for a doctrine of inspiration that keeps up with the facts of Scripture. Allied to this, the article is something of a bibliographical study of recent developments in textual research following the discovery of the Dead Sea scrolls.

  6. What is Mathematics? Perspectives inspired by anthropology

    DEFF Research Database (Denmark)

    Høyrup, Jens

    The paper discusses the question “what is mathematics” from a point of view inspired by anthropology. In this perspective, the character of mathematical thinking and argument is strongly affected – almost essentially determined, indeed – by the dynamics of the specific social, mostly professional...

  7. BATMAV: a 2-DOF bio-inspired flapping flight platform

    Science.gov (United States)

    Bunget, Gheorghe; Seelecke, Stefan

    2010-04-01

    Due to the availability of small sensors, Micro-Aerial Vehicles (MAVs) can be used for detection missions of biological, chemical and nuclear agents. Traditionally these devices used fixed or rotary wings, actuated with electric DC motortransmission, a system which brings the disadvantage of a heavier platform. The overall objective of the BATMAV project is to develop a biologically inspired bat-like MAV with flexible and foldable wings for flapping flight. This paper presents a flight platform that features bat-inspired wings which are able to actively fold their elbow joints. A previous analysis of the flight physics for small birds, bats and large insects, revealed that the mammalian flight anatomy represents a suitable flight platform that can be actuated efficiently using Shape Memory Alloy (SMA) artificial-muscles. A previous study of the flight styles in bats based on the data collected by Norberg [1] helped to identify the required joint angles as relevant degrees of freedom for wing actuation. Using the engineering theory of robotic manipulators, engineering kinematic models of wings with 2 and 3-DOFs were designed to mimic the wing trajectories of the natural flier Plecotus auritus. Solid models of the bat-like skeleton were designed based on the linear and angular dimensions resulted from the kinematic models. This structure of the flight platform was fabricated using rapid prototyping technologies and assembled to form a desktop prototype with 2-DOFs wings. Preliminary flapping test showed suitable trajectories for wrist and wingtip that mimic the flapping cycle of the natural flyer.

  8. Kittens! Inspired by Kittens! Undergraduate Theorists Inspired by YouTube

    Science.gov (United States)

    Anderson, Diane Downer; Lewis, Mark; Peterson, Sarah; Griggs, Samantha; Grubb, Gina; Singer, Nicole; Fried, Simone; Krone, Elizabeth; Elko, Leigh; Narang, Jasmine

    2010-01-01

    A professor and students in an undergraduate honors research seminar were inspired to playfully link old and contemporary literacy theories to a 2.0 media artifact, the popular YouTube video Kittens! Inspired by Kittens! (KIbK) starring 6 year-old Maddie. In this article KIbK is theorized drawing on frames of school-based reading instruction,…

  9. Visualization of the Biological Behavior of Tumor-Associated Macrophages in Living Mice with Colon Cancer Using Multimodal Optical Reporter Gene Imaging

    Directory of Open Access Journals (Sweden)

    Yun Ju Choi

    2016-03-01

    Full Text Available We sought to visualize the migration of tumor-associated macrophages (TAMs to tumor lesions and to evaluate the effects of anti-inflammatory drugs on TAM-modulated tumor progression in mice with colon cancer using a multimodal optical reporter gene system. Murine macrophage Raw264.7 cells expressing an enhanced firefly luciferase (Raw/effluc and murine colon cancer CT26 cells coexpressing Rluc and mCherry (CT26/Rluc-mCherry, CT26/RM were established. CT26/RM tumor-bearing mice received Raw/effluc via their tail veins, and combination of bioluminescence imaging (BLI and fluorescence imaging (FLI was conducted for in vivo imaging of TAMs migration and tumor progression. Dexamethasone (DEX, a potent anti-inflammatory drug, was administered intraperitoneally to tumor-bearing mice following the intravenous transfer of Raw/effluc cells. The migration of TAMs and tumor growth was monitored by serial FLI and BLI. The migration of Raw/effluc cells to tumor lesions was observed at day 1, and BLI signals were still distinct at tumor lesions on day 4. Localization of BLI signals from migrated Raw/effluc cells corresponded to that of FLI signals from CT26/RM tumors. In vivo FLI of tumors demonstrated enhanced tumor growth associated with macrophage migration to tumor lesions. Treatment with DEX inhibited the influx of Raw/effluc cells to tumor lesions and abolished the enhanced tumor growth associated with macrophage migration. These findings suggest that molecular imaging approach for TAM tracking is a valuable tool for evaluating the role of TAMs in the tumor microenvironment as well as for the development of new drugs to control TAM involvement in the modulation of tumor progression.

  10. Multi-AUV Hunting Algorithm Based on Bio-inspired Neural Network in Unknown Environments

    Directory of Open Access Journals (Sweden)

    Daqi Zhu

    2015-11-01

    Full Text Available The multi-AUV hunting problem is one of the key issues in multi-robot system research. In order to hunt the target efficiently, a new hunting algorithm based on a bio-inspired neural network has been proposed in this paper. Firstly, the AUV’s working environment can be represented, based on the biological-inspired neural network model. There is one-to-one correspondence between each neuron in the neural network and the position of the grid map in the underwater environment. The activity values of biological neurons then guide the AUV’s sailing path and finally the target is surrounded by AUVs. In addition, a method called negotiation is used to solve the AUV’s allocation of hunting points. The simulation results show that the algorithm used in the paper can provide rapid and highly efficient path planning in the unknown environment with obstacles and non-obstacles.

  11. Solar Image Analysis and Visualization

    CERN Document Server

    Ireland, J

    2009-01-01

    This volume presents a selection of papers on the state of the art of image enhancement, automated feature detection, machine learning, and visualization tools in support of solar physics that focus on the challenges presented by new ground-based and space-based instrumentation. The articles and topics were inspired by the Third Solar Image Processing Workshop, held at Trinity College Dublin, Ireland but contributions from other experts have been included as well. This book is mainly aimed at researchers and graduate students working on image processing and compter vision in astronomy and solar physics.

  12. Visual Analysis of Weblog Content

    Energy Technology Data Exchange (ETDEWEB)

    Gregory, Michelle L.; Payne, Deborah A.; McColgin, Dave; Cramer, Nick O.; Love, Douglas V.

    2007-03-26

    In recent years, one of the advances of the World Wide Web is social media and one of the fastest growing aspects of social media is the blogosphere. Blogs make content creation easy and are highly accessible through web pages and syndication. With their growing influence, a need has arisen to be able to monitor the opinions and insight revealed within their content. In this paper we describe a technical approach for analyzing the content of blog data using a visual analytic tool, IN-SPIRE, developed by Pacific Northwest National Laboratory. We highlight the capabilities of this tool that are particularly useful for information gathering from blog data.

  13. Microgravity Fluids for Biology, Workshop

    Science.gov (United States)

    Griffin, DeVon; Kohl, Fred; Massa, Gioia D.; Motil, Brian; Parsons-Wingerter, Patricia; Quincy, Charles; Sato, Kevin; Singh, Bhim; Smith, Jeffrey D.; Wheeler, Raymond M.

    2013-01-01

    Microgravity Fluids for Biology represents an intersection of biology and fluid physics that present exciting research challenges to the Space Life and Physical Sciences Division. Solving and managing the transport processes and fluid mechanics in physiological and biological systems and processes are essential for future space exploration and colonization of space by humans. Adequate understanding of the underlying fluid physics and transport mechanisms will provide new, necessary insights and technologies for analyzing and designing biological systems critical to NASAs mission. To enable this mission, the fluid physics discipline needs to work to enhance the understanding of the influence of gravity on the scales and types of fluids (i.e., non-Newtonian) important to biology and life sciences. In turn, biomimetic, bio-inspired and synthetic biology applications based on physiology and biology can enrich the fluid mechanics and transport phenomena capabilities of the microgravity fluid physics community.

  14. Adipogenic placenta-derived mesenchymal stem cells are not lineage restricted by withdrawing extrinsic factors: developing a novel visual angle in stem cell biology.

    Science.gov (United States)

    Hu, C; Cao, H; Pan, X; Li, J; He, J; Pan, Q; Xin, J; Yu, X; Li, J; Wang, Y; Zhu, D; Li, L

    2016-03-17

    Current evidence implies that differentiated bone marrow mesenchymal stem cells (BMMSCs) can act as progenitor cells and transdifferentiate across lineage boundaries. However, whether this unrestricted lineage has specificities depending on the stem cell type is unknown. Placental-derived mesenchymal stem cells (PDMSCs), an easily accessible and less invasive source, are extremely useful materials in current stem cell therapies. No studies have comprehensively analyzed the transition in morphology, surface antigens, metabolism and multilineage potency of differentiated PDMSCs after their dedifferentiation. In this study, we showed that after withdrawing extrinsic factors, adipogenic PDMSCs reverted to a primitive cell population and retained stem cell characteristics. The mitochondrial network during differentiation and dedifferentiation may serve as a marker of absent or acquired pluripotency in various stem cell models. The new population proliferated faster than unmanipulated PDMSCs and could be differentiated into adipocytes, osteocytes and hepatocytes. The cell adhesion molecules (CAMs) signaling pathway and extracellular matrix (ECM) components modulate cell behavior and enable the cells to proliferate or differentiate during the differentiation, dedifferentiation and redifferentiation processes in our study. These observations indicate that the dedifferentiated PDMSCs are distinguishable from the original PDMSCs and may serve as a novel source in stem cell biology and cell-based therapeutic strategies. Furthermore, whether PDMSCs differentiated into other lineages can be dedifferentiated to a primitive cell population needs to be investigated.

  15. Adipogenic placenta-derived mesenchymal stem cells are not lineage restricted by withdrawing extrinsic factors: developing a novel visual angle in stem cell biology

    Science.gov (United States)

    Hu, C; Cao, H; Pan, X; Li, J; He, J; Pan, Q; Xin, J; Yu, X; Li, J; Wang, Y; Zhu, D; Li, L

    2016-01-01

    Current evidence implies that differentiated bone marrow mesenchymal stem cells (BMMSCs) can act as progenitor cells and transdifferentiate across lineage boundaries. However, whether this unrestricted lineage has specificities depending on the stem cell type is unknown. Placental-derived mesenchymal stem cells (PDMSCs), an easily accessible and less invasive source, are extremely useful materials in current stem cell therapies. No studies have comprehensively analyzed the transition in morphology, surface antigens, metabolism and multilineage potency of differentiated PDMSCs after their dedifferentiation. In this study, we showed that after withdrawing extrinsic factors, adipogenic PDMSCs reverted to a primitive cell population and retained stem cell characteristics. The mitochondrial network during differentiation and dedifferentiation may serve as a marker of absent or acquired pluripotency in various stem cell models. The new population proliferated faster than unmanipulated PDMSCs and could be differentiated into adipocytes, osteocytes and hepatocytes. The cell adhesion molecules (CAMs) signaling pathway and extracellular matrix (ECM) components modulate cell behavior and enable the cells to proliferate or differentiate during the differentiation, dedifferentiation and redifferentiation processes in our study. These observations indicate that the dedifferentiated PDMSCs are distinguishable from the original PDMSCs and may serve as a novel source in stem cell biology and cell-based therapeutic strategies. Furthermore, whether PDMSCs differentiated into other lineages can be dedifferentiated to a primitive cell population needs to be investigated. PMID:26986509

  16. The Inspiration of Hope in Substance Abuse Counseling

    Science.gov (United States)

    Koehn, Corinne; Cutcliffe, John R.

    2012-01-01

    This study used a grounded theory method to explore how counselors inspire hope in clients struggling with substance abuse. Findings from 10 participants revealed that hope inspiration occurred in 3 phases and consisted of several categories of hope-inspiring processes. Implications for counseling practice, counselor education, and research are…

  17. Limited Bandwidth Recognition of Collective Behaviors in Bio-Inspired Swarms

    Science.gov (United States)

    2014-05-09

    UAV path planning and applies to some constant-speed, non-holonomic ground robots [5]. Similar to the Couzin model of biological swarms [3] and the...BEHAVIORS IN BIO-INSPIRED SWARMS 5a. CONTRACT NUMBER IN-HOUSE 5b. GRANT NUMBER 5c. PROGRAM ELEMENT NUMBER 62788F 6. AUTHOR(S) Daniel S. Brown (AFRL... swarming and modes of controlling them are numerous; however, to date swarm researchers have mostly ignored a fundamental problem that impedes

  18. Evolving Transport Networks With Cellular Automata Models Inspired by Slime Mould.

    Science.gov (United States)

    Tsompanas, Michail-Antisthenis I; Sirakoulis, Georgios Ch; Adamatzky, Andrew I

    2015-09-01

    Man-made transport networks and their design are closely related to the shortest path problem and considered amongst the most debated problems of computational intelligence. Apart from using conventional or bio-inspired computer algorithms, many researchers tried to solve this kind of problem using biological computing substrates, gas-discharge solvers, prototypes of a mobile droplet, and hot ice computers. In this aspect, another example of biological computer is the plasmodium of acellular slime mould Physarum polycephalum (P. polycephalum), which is a large single cell visible by an unaided eye and has been proven as a reliable living substrate for implementing biological computing devices for computational geometry, graph-theoretical problems, and optimization and imitation of transport networks. Although P. polycephalum is easy to experiment with, computing devices built with the living slime mould are extremely slow; it takes slime mould days to execute a computation. Consequently, mapping key computing mechanisms of the slime mould onto silicon would allow us to produce efficient bio-inspired computing devices to tackle with hard to solve computational intelligence problems like the aforementioned. Toward this direction, a cellular automaton (CA)-based, Physarum-inspired, network designing model is proposed. This novel CA-based model is inspired by the propagating strategy, the formation of tubular networks, and the computing abilities of the plasmodium of P. polycephalum. The results delivered by the CA model demonstrate a good match with several previously published results of experimental laboratory studies on imitation of man-made transport networks with P. polycephalum. Consequently, the proposed CA model can be used as a virtual, easy-to-access, and biomimicking laboratory emulator that will economize large time periods needed for biological experiments while producing networks almost identical to the tubular networks of the real-slime mould.

  19. Insect-Inspired Micropump: Flow in a Tube with Local Contractions

    OpenAIRE

    2015-01-01

    A biologically-inspired micropumping model in a three-dimensional tube subjected to localized wall constrictions is given in this article. The present study extends our previous pumping model where a 3D channel with a square cross-section is considered. The proposed pumping approach herein applies to tubular geometries and is given to mimic an insect respiration mode, where the tracheal tube rhythmic wall contractions are used/hypothesized to enhance the internal flow transport within the ent...

  20. Visualization Laboratory

    Data.gov (United States)

    Federal Laboratory Consortium — FUNCTION: Evaluates and improves the operational effectiveness of existing and emerging electronic warfare systems. By analyzing and visualizing simulation results...

  1. Traffic Visualization

    DEFF Research Database (Denmark)

    Picozzi, Matteo; Verdezoto, Nervo; Pouke, Matti;

    2013-01-01

    In this paper, we present a space-time visualization to provide city's decision-makers the ability to analyse and uncover important "city events" in an understandable manner for city planning activities. An interactive Web mashup visualization is presented that integrates several visualization...... techniques to give a rapid overview of traffic data. We illustrate our approach as a case study for traffic visualization systems, using datasets from the city of Oulu that can be extended to other city planning activities. We also report the feedback of real users (traffic management employees, traffic police...

  2. Spider's web inspires fibres for industry

    Science.gov (United States)

    Dacey, James

    2010-03-01

    Spiders may not be everybody's idea of natural beauty, but nobody can deny the artistry in the webs that they spin, especially when decorated with water baubles in the morning dew. Inspired by this spectacle, a group of researchers in China has mimicked the structural properties of the spider's web to create a fibre for industry that can manipulate water with the same skill and efficiency, writes James Dacey.

  3. InSpiRe - Intelligent Spine Rehabilitation

    DEFF Research Database (Denmark)

    Bøg, Kasper Hafstrøm; Helms, Niels Henrik; Kjær, Per;

    InSpiRe er et projekt, der har haft omdrejningspunkt i etableringen af et nyt netværk indenfor intelligent genoptræning med særligt fokus på rygsmerter. Projektet er gennemført i perioden 1/3 2011 2011-1/3 2012, med støtte fra Syddansk Vækstforum, og er blevet drevet af projektparterne Knowledge...

  4. Underwater Robotic Propulsors Inspired by Jetting Jellyfish

    OpenAIRE

    Marut, Kenneth Joseph

    2014-01-01

    Underwater surveillance missions both for defense and civilian applications are continually demanding the need for unmanned underwater vehicles or UUVs. Unmanned vehicles are needed to meet the logistical requirements for operation over long distances, greater depths, long duration, and harsh conditions. In order to design UUVs that not only satisfy these needs but are also adaptive and efficient, there has been increasing interest in taking inspiration from nature. These biomimetic/bio-insp...

  5. Binary compact object inspiral: Detection expectations

    Indian Academy of Sciences (India)

    Vassiliki Kalogera

    2004-10-01

    We review the current estimates of binary compact object inspiral rates in particular in view of the recently discovered highly relativistic binary pulsar J0737-3039. One of the robust results is that, because of this discovery, the rate estimates for binary neutron stars have increased by a factor of 6-7 independent of any uncertainties related to the pulsar population properties. This rate increase has dramatic implications for gravitational wave detectors. For initial LIGO, the most probable detection rates for double neutron star (DNS) inspirals is 1 event/(5{250) yr; at 95% confidence we obtain rates up to 1/1.5 yr. For advanced LIGO, the most probable rates are 20-1000 events/yr. These predictions, for the first time, bring the expectations for DNS detections by initial LIGO to the astrophysically relevant regime. We also use our models to predict that the large-scale Parkes multibeam pulsar survey with acceleration searches could detect an average of three to four binary pulsars similar to those known at present. In comparison, rate estimates for binaries with black holes are derived based on binary evolution calculation, and based on the optimistic ends of the ranges, remain an important candidate for inspiral detection in the next few years. We also consider another aspect of the detectability of binary inspiral: the effect of precession on the detection efficiency of astrophysically relevant binaries. Based on our current astrophysical expectations, large tilt angles are not favored. As a result the decrease in detection rate varies rather slowly with black hole spin magnitude and is within 20-30% of the maximum possible values.

  6. Visual search

    NARCIS (Netherlands)

    Toet, A.; Bijl, P.

    2003-01-01

    Visual search, with or without the aid of optical or electro-optical instruments, plays a significant role in various types of military and civilian operations (e.g., reconnaissance, surveillance, and search and rescue). Advance knowledge of human visual search and target acquisition performance is

  7. Visual Thinking.

    Science.gov (United States)

    Arnheim, Rudolf

    Based on the more general principle that all thinking (including reasoning) is basically perceptual in nature, the author proposes that visual perception is not a passive recording of stimulus material but an active concern of the mind. He delineates the task of visually distinguishing changes in size, shape, and position and points out the…

  8. Remote Sensing of Martian Terrain Hazards via Visually Salient Feature Detection

    Science.gov (United States)

    Al-Milli, S.; Shaukat, A.; Spiteri, C.; Gao, Y.

    2014-04-01

    The main objective of the FASTER remote sensing system is the detection of rocks on planetary surfaces by employing models that can efficiently characterise rocks in terms of semantic descriptions. The proposed technique abates some of the algorithmic limitations of existing methods with no training requirements, lower computational complexity and greater robustness towards visual tracking applications over long-distance planetary terrains. Visual saliency models inspired from biological systems help to identify important regions (such as rocks) in the visual scene. Surface rocks are therefore completely described in terms of their local or global conspicuity pop-out characteristics. These local and global pop-out cues are (but not limited to); colour, depth, orientation, curvature, size, luminance intensity, shape, topology etc. The currently applied methods follow a purely bottom-up strategy of visual attention for selection of conspicuous regions in the visual scene without any topdown control. Furthermore the choice of models used (tested and evaluated) are relatively fast among the state-of-the-art and have very low computational load. Quantitative evaluation of these state-ofthe- art models was carried out using benchmark datasets including the Surrey Space Centre Lab Testbed, Pangu generated images, RAL Space SEEKER and CNES Mars Yard datasets. The analysis indicates that models based on visually salient information in the frequency domain (SRA, SDSR, PQFT) are the best performing ones for detecting rocks in an extra-terrestrial setting. In particular the SRA model seems to be the most optimum of the lot especially that it requires the least computational time while keeping errors competitively low. The salient objects extracted using these models can then be merged with the Digital Elevation Models (DEMs) generated from the same navigation cameras in order to be fused to the navigation map thus giving a clear indication of the rock locations.

  9. Correlation networks visualization

    Directory of Open Access Journals (Sweden)

    Nicholas J. Provart

    2012-10-01

    Full Text Available New, in silico ways of generating hypotheses based on large data sets have emerged in the past decade. These data sets have been used to investigate different aspects of plant biology, especially at the level of transcriptome, from tissue-specific expression patterns to patterns in as little as a few cells. Such publicly-available data are a boon to researchers for hypothesis generation by providing a guide for experimental work such as phenotyping or genetic analysis. More advanced computational methods can leverage these data via gene coexpression analysis, the results of which can be visualized and refined using network analysis. Other kinds of networks of e.g. protein-protein interactions, can also be used to inform biology. These networks can be visualized and analyzed with additional information on gene expression levels, subcellular localization, etc., or with other emerging kinds information. Finally, cross-level correlation is an area that will become increasingly important. Visualizing these cross-level correlations will require new data visualization tools.

  10. Visualizing Summary Statistics and Uncertainty

    KAUST Repository

    Potter, K.

    2010-08-12

    The graphical depiction of uncertainty information is emerging as a problem of great importance. Scientific data sets are not considered complete without indications of error, accuracy, or levels of confidence. The visual portrayal of this information is a challenging task. This work takes inspiration from graphical data analysis to create visual representations that show not only the data value, but also important characteristics of the data including uncertainty. The canonical box plot is reexamined and a new hybrid summary plot is presented that incorporates a collection of descriptive statistics to highlight salient features of the data. Additionally, we present an extension of the summary plot to two dimensional distributions. Finally, a use-case of these new plots is presented, demonstrating their ability to present high-level overviews as well as detailed insight into the salient features of the underlying data distribution. © 2010 The Eurographics Association and Blackwell Publishing Ltd.

  11. Communication analysis for feedback control of civil infrastructure using cochlea-inspired sensing nodes

    Science.gov (United States)

    Peckens, Courtney A.; Cook, Ireana; Lynch, Jerome P.

    2016-04-01

    Wireless sensor networks (WSNs) have emerged as a reliable, low-cost alternative to the traditional wired sensing paradigm. While such networks have made significant progress in the field of structural monitoring, significantly less development has occurred for feedback control applications. Previous work in WSNs for feedback control has highlighted many of the challenges of using this technology including latency in the wireless communication channel and computational inundation at the individual sensing nodes. This work seeks to overcome some of those challenges by drawing inspiration from the real-time sensing and control techniques employed by the biological central nervous system and in particular the mammalian cochlea. A novel bio-inspired wireless sensor node was developed that employs analog filtering techniques to perform time-frequency decomposition of a sensor signal, thus encompassing the functionality of the cochlea. The node then utilizes asynchronous sampling of the filtered signal to compress the signal prior to communication. This bio-inspired sensing architecture is extended to a feedback control application in order to overcome the traditional challenges currently faced by wireless control. In doing this, however, the network experiences high bandwidths of low-significance information exchange between nodes, resulting in some lost data. This study considers the impact of this lost data on the control capabilities of the bio-inspired control architecture and finds that it does not significantly impact the effectiveness of control.

  12. A Bio-Inspired QoS-Oriented Handover Model in Heterogeneous Wireless Networks

    Directory of Open Access Journals (Sweden)

    Daxin Tian

    2014-01-01

    Full Text Available We propose a bio-inspired model for making handover decision in heterogeneous wireless networks. It is based on an extended attractor selection model, which is biologically inspired by the self-adaptability and robustness of cellular response to the changes in dynamic environments. The goal of the proposed model is to guarantee multiple terminals’ satisfaction by meeting the QoS requirements of those terminals’ applications, and this model also attempts to ensure the fairness of network resources allocation, in the meanwhile, to enable the QoS-oriented handover decision adaptive to dynamic wireless environments. Some numerical simulations are preformed to validate our proposed bio-inspired model in terms of adaptive attractor selection in different noisy environments. And the results of some other simulations prove that the proposed handover scheme can adapt terminals’ network selection to the varying wireless environment and benefits the QoS of multiple terminal applications simultaneously and automatically. Furthermore, the comparative analysis also shows that the bio-inspired model outperforms the utility function based handover decision scheme in terms of ensuring a better QoS satisfaction and a better fairness of network resources allocation in dynamic heterogeneous wireless networks.

  13. Adapting models of visual aesthetics for personalized content creation

    DEFF Research Database (Denmark)

    Liapis, Antonios; Yannakakis, Georgios N.; Togelius, Julian

    2012-01-01

    This paper introduces a search-based approach to personalized content generation with respect to visual aesthetics. The approach is based on a two-step adaptation procedure where (1) the evaluation function that characterizes the content is adjusted to match the visual aesthetics of users and (2......) the content itself is optimized based on the personalized evaluation function. To test the efficacy of the approach we design fitness functions based on universal properties of visual perception, inspired by psychological and neurobiological research. Using these visual properties we generate aesthetically...

  14. Educations of Vision - relational strategies in visual culture

    DEFF Research Database (Denmark)

    Illeris, Helene

    2004-01-01

    The article is divided into three parts. Through examples from twentieth century Scandinavian visual arts education the first part ?Epistemological inquiries? discusses how the historical and social construction of dominant modern strategies of vision has occurred. The second part ?Experimentalist...... redescriptions? employs poststructuralist and feminist thinking about visual culture in an attempt to explore alternative understandings of visual education. In the final part ?Educations of vision in late modernity? socialization and self creation are proposed as two different, but supplementary, educational...... functions which contemporary visual education inspired by epistemological and experimentalist approaches should aim to fulfill....

  15. Design of a dynamic sensor inspired by bat ears

    Science.gov (United States)

    Müller, Rolf; Pannala, Mittu; Reddy, O. Praveen K.; Meymand, Sajjad Z.

    2012-09-01

    In bats, the outer ear shapes act as beamforming baffles that create a spatial sensitivity pattern for the reception of the biosonar signals. Whereas technical receivers for wave-based signals usually have rigid geometries, the outer ears of some bat species, such as horseshoe bats, can undergo non-rigid deformations as a result of muscular actuation. It is hypothesized that these deformations provide the animals with a mechanism to adapt their spatial hearing sensitivity on short, sub-second time scales. This biological approach could be of interest to engineering as an inspiration for the design of beamforming devices that combine flexibility with parsimonious implementation. To explore this possibility, a biomimetic dynamic baffle was designed based on a simple shape overall geometry based on an average bat ear. This shape was augmented with three different biomimetic local shape features, a ridge on its exposed surface as well as a flap and an incision along its rim. Dynamic non-rigid deformations of the shape were accomplished through a simple actuation mechanism based on linear actuation inserted at a single point. Despite its simplicity, the prototype device was able to reproduce the dynamic functional characteristics that have been predicted for its biological paragon in a qualitative fashion.

  16. A cognitive computational model inspired by the immune system response.

    Science.gov (United States)

    Abdo Abd Al-Hady, Mohamed; Badr, Amr Ahmed; Mostafa, Mostafa Abd Al-Azim

    2014-01-01

    The immune system has a cognitive ability to differentiate between healthy and unhealthy cells. The immune system response (ISR) is stimulated by a disorder in the temporary fuzzy state that is oscillating between the healthy and unhealthy states. However, modeling the immune system is an enormous challenge; the paper introduces an extensive summary of how the immune system response functions, as an overview of a complex topic, to present the immune system as a cognitive intelligent agent. The homogeneity and perfection of the natural immune system have been always standing out as the sought-after model we attempted to imitate while building our proposed model of cognitive architecture. The paper divides the ISR into four logical phases: setting a computational architectural diagram for each phase, proceeding from functional perspectives (input, process, and output), and their consequences. The proposed architecture components are defined by matching biological operations with computational functions and hence with the framework of the paper. On the other hand, the architecture focuses on the interoperability of main theoretical immunological perspectives (classic, cognitive, and danger theory), as related to computer science terminologies. The paper presents a descriptive model of immune system, to figure out the nature of response, deemed to be intrinsic for building a hybrid computational model based on a cognitive intelligent agent perspective and inspired by the natural biology. To that end, this paper highlights the ISR phases as applied to a case study on hepatitis C virus, meanwhile illustrating our proposed architecture perspective.

  17. Demonstrations of bio-inspired perching landing gear for UAVs

    Science.gov (United States)

    Tieu, Mindy; Michael, Duncan M.; Pflueger, Jeffery B.; Sethi, Manik S.; Shimazu, Kelli N.; Anthony, Tatiana M.; Lee, Christopher L.

    2016-04-01

    Results are presented which demonstrate the feasibility and performance of two concepts of biologically-inspired landing-gear systems that enable bird-sized, unmanned aerial vehicles (UAV's) to land, perch, and take-off from branchlike structures and/or ledges. The first concept follows the anatomy of birds that can grasp ahold of a branch and perch as tendons in their legs are tensioned. This design involves a gravity-activated, cable-driven, underactuated, graspingfoot mechanism. As the UAV lands, its weight collapses a four-bar linkage pulling a cable which curls two opposing, multi-segmented feet to grasp the landing target. Each foot is a single, compliant mechanism fabricated by simultaneouly 3D-printing a flexible thermo-plastic and a stiffer ABS plastic. The design is optimized to grasp structures over a range of shapes and sizes. Quasi-static and flight tests of this landing gear affixed to RC rotorcraft (24 cm to 550 cm in diameter) demonstrate that the aircraft can land, perch, and take-off from a tree branch, rectangular wood board, PVC pipe, metal hand rail, chair armrest, and in addition, a stone wall ledge. Stability tests show that perching is maintained under base and wind disturbances. The second design concept, inspired by roosting bats, is a two-material, 3D-printed hooking mechanism that enables the UAV to stably suspend itself from a wire or small-diameter branch. The design balances structural stiffness for support and flexibility for the perching process. A flight-test demonstrates the attaching and dis-engaging of a small, RC quadcopter from a suspended line.

  18. Stingray-inspired robot with simply actuated intermediate motion

    Science.gov (United States)

    Neely, Lincoln; Gaiennie, Jack; Noble, Nick; Erickson, Jonathan C.

    2016-04-01

    Batoids, or rays, utilize unique forms of locomotion that may offer more efficient techniques of motorized propulsion in various marine environments. We present a novel biomimetic engineering design and assembly of a stingray-inspired robot swimmer. The robots locomotion mimics the Dasyatis americana, or southern stingray, whose distinction among rays is its intermediate motion, characterized by sweeping strokes that propagate between 1/2-1 wavelength of the fin profile in the posterior direction. Though oscillatory ( wavelengths) ray-based robots have been created, this project demonstrates new engineering possibilities in what is, to the best of our knowledge, the first intermediately propelled batoid-based robot. The robots fins were made of silicone rubber, cast in a 3-D printed mold, with wingspan of 42 cm (1/2 - 1/5 scale for males and females, respectively, scale of model organism). Two anteriorly placed servomotors per fin were used, all controlled by one wirelessly enabled Arduino microcontroller. Each servomotor oscillated a flexible rod with cylindrical joint, whose frequency, speed, and front-back phase delay were user-programmed over wireless connection. During free-swimming tests, the fin profile developed about 0.8 wavelength, qualifying for successful mimicry of its biological inspiration. The robot satisfactorily maintained straight-line motion, reaching average peak velocity of 9.4+/-1.0 cm/s (0.27-0.03 body lengths/second) at its optimum flapping frequency of 1.4 Hz. This is in the same order of magnitude of speed normalized to body length achieved by others in two recent batoid-based projects. In summary, our robot performed intermediate stingray locomotion with relatively fewer components, which reveals robust potential for innovation of the simple intermediate batoid-based robot swimmer.

  19. Cellular automaton model of crowd evacuation inspired by slime mould

    Science.gov (United States)

    Kalogeiton, V. S.; Papadopoulos, D. P.; Georgilas, I. P.; Sirakoulis, G. Ch.; Adamatzky, A. I.

    2015-04-01

    In all the living organisms, the self-preservation behaviour is almost universal. Even the most simple of living organisms, like slime mould, is typically under intense selective pressure to evolve a response to ensure their evolution and safety in the best possible way. On the other hand, evacuation of a place can be easily characterized as one of the most stressful situations for the individuals taking part on it. Taking inspiration from the slime mould behaviour, we are introducing a computational bio-inspired model crowd evacuation model. Cellular Automata (CA) were selected as a fully parallel advanced computation tool able to mimic the Physarum's behaviour. In particular, the proposed CA model takes into account while mimicking the Physarum foraging process, the food diffusion, the organism's growth, the creation of tubes for each organism, the selection of optimum tube for each human in correspondence to the crowd evacuation under study and finally, the movement of all humans at each time step towards near exit. To test the model's efficiency and robustness, several simulation scenarios were proposed both in virtual and real-life indoor environments (namely, the first floor of office building B of the Department of Electrical and Computer Engineering of Democritus University of Thrace). The proposed model is further evaluated in a purely quantitative way by comparing the simulation results with the corresponding ones from the bibliography taken by real data. The examined fundamental diagrams of velocity-density and flow-density are found in full agreement with many of the already published corresponding results proving the adequacy, the fitness and the resulting dynamics of the model. Finally, several real Physarum experiments were conducted in an archetype of the aforementioned real-life environment proving at last that the proposed model succeeded in reproducing sufficiently the Physarum's recorded behaviour derived from observation of the aforementioned

  20. Visually Exploring Transportation Schedules.

    Science.gov (United States)

    Palomo, Cesar; Guo, Zhan; Silva, Cláudio T; Freire, Juliana

    2016-01-01

    Public transportation schedules are designed by agencies to optimize service quality under multiple constraints. However, real service usually deviates from the plan. Therefore, transportation analysts need to identify, compare and explain both eventual and systemic performance issues that must be addressed so that better timetables can be created. The purely statistical tools commonly used by analysts pose many difficulties due to the large number of attributes at trip- and station-level for planned and real service. Also challenging is the need for models at multiple scales to search for patterns at different times and stations, since analysts do not know exactly where or when relevant patterns might emerge and need to compute statistical summaries for multiple attributes at different granularities. To aid in this analysis, we worked in close collaboration with a transportation expert to design TR-EX, a visual exploration tool developed to identify, inspect and compare spatio-temporal patterns for planned and real transportation service. TR-EX combines two new visual encodings inspired by Marey's Train Schedule: Trips Explorer for trip-level analysis of frequency, deviation and speed; and Stops Explorer for station-level study of delay, wait time, reliability and performance deficiencies such as bunching. To tackle overplotting and to provide a robust representation for a large numbers of trips and stops at multiple scales, the system supports variable kernel bandwidths to achieve the level of detail required by users for different tasks. We justify our design decisions based on specific analysis needs of transportation analysts. We provide anecdotal evidence of the efficacy of TR-EX through a series of case studies that explore NYC subway service, which illustrate how TR-EX can be used to confirm hypotheses and derive new insights through visual exploration.

  1. Collective form generation through visual participatory representation

    DEFF Research Database (Denmark)

    Day, Dennis; Sharma, Nishant; Punekar, Ravi

    2012-01-01

    In order to inspire and inform designers with the users data from participatory research, it may be important to represent data in a visual format that is easily understandable to the designers. For a case study in vehicle design, the paper outlines visual representation of data and the use...... information from participatory research takes a form manifestation in collective form conceptualization by a set of designers....... of the same in the collective form generation session with a set of designers (vehicle design students) where designers use sketching as a tool to discuss, conceptualise and negotiate concepts towards the final vehicle form. Further, this paper attempts to demonstrate how deep and tacit context sensitive...

  2. Large-scale functional models of visual cortex for remote sensing

    Energy Technology Data Exchange (ETDEWEB)

    Brumby, Steven P [Los Alamos National Laboratory; Kenyon, Garrett [Los Alamos National Laboratory; Rasmussen, Craig E [Los Alamos National Laboratory; Swaminarayan, Sriram [Los Alamos National Laboratory; Bettencourt, Luis [Los Alamos National Laboratory; Landecker, Will [PORTLAND STATE UNIV.

    2009-01-01

    Neuroscience has revealed many properties of neurons and of the functional organization of visual cortex that are believed to be essential to human vision, but are missing in standard artificial neural networks. Equally important may be the sheer scale of visual cortex requiring {approx}1 petaflop of computation. In a year, the retina delivers {approx}1 petapixel to the brain, leading to massively large opportunities for learning at many levels of the cortical system. We describe work at Los Alamos National Laboratory (LANL) to develop large-scale functional models of visual cortex on LANL's Roadrunner petaflop supercomputer. An initial run of a simple region VI code achieved 1.144 petaflops during trials at the IBM facility in Poughkeepsie, NY (June 2008). Here, we present criteria for assessing when a set of learned local representations is 'complete' along with general criteria for assessing computer vision models based on their projected scaling behavior. Finally, we extend one class of biologically-inspired learning models to problems of remote sensing imagery.

  3. Visual Impairment

    Science.gov (United States)

    ... What Causes Visual Impairment? People rarely lose their eyesight during their teen years. When they do, it's ... inflammation in the eye. It's often found in poor rural countries that have overcrowded living conditions and ...

  4. Visual cognition

    Energy Technology Data Exchange (ETDEWEB)

    Pinker, S.

    1985-01-01

    This book consists of essays covering issues in visual cognition presenting experimental techniques from cognitive psychology, methods of modeling cognitive processes on computers from artificial intelligence, and methods of studying brain organization from neuropsychology. Topics considered include: parts of recognition; visual routines; upward direction; mental rotation, and discrimination of left and right turns in maps; individual differences in mental imagery, computational analysis and the neurological basis of mental imagery: componental analysis.

  5. Electrowetting-controlled bio-inspired artificial iridophores

    Science.gov (United States)

    Manakasettharn, Supone; Taylor, J. Ashley; Krupenkin, Tom

    2011-10-01

    Many marine organisms have evolved complex optical mechanisms of dynamic skin color control that allow them to drastically change their visual appearance. In particular, cephalopods have developed especially effective dynamic color control mechanism based on the mechanical actuation of the micro-scale optical structures, which produce either variable degrees of area coverage by a given color (chromatophores) or variations in spatial orientation of the reflective and diffractive surfaces (iridophores). In this work we describe the design, fabrication and characterization of electrowetting-controlled bio-inspired artificial iridophores. The developed iridophores geometrically resemble microflowers with flexible reflective petals. The microflowers are fabricated on a silicon substrate using surface micromachining techniques. After fabrication a small droplet of conductive liquid is deposited at the center of each microflower. This causes the flower petals to partially wrap around the droplet forming a structure similar to capillary origami. The dynamic control over the degree of wrapping is achieved by applying a voltage differential between the conductive core of the petals and the droplet. The applied voltage causes dynamic contact angle change between the droplet and each of the petals due to the electrowetting effect. We have characterized mechanical and optical properties of the microstructures and discuss their electrowetting-based actuation. These experimental results are in good agreement with a 3D theoretical model based on electrocapillarity and elasticity theory. This work forms the basis for a broad range of novel optical devices.

  6. Bio-inspired approaches to sensing for defence and security applications.

    Science.gov (United States)

    Biggins, Peter D E; Kusterbeck, Anne; Hiltz, John A

    2008-05-01

    Interdisciplinary research in biotechnology and related scientific areas has increased tremendously over the past decade. This rapid pace, in conjunction with advances in microfabricated systems, computer hardware, bioengineering and the availability of low-powered miniature components, has now made it feasible to design bio-inspired materials, sensors and systems with tremendous potential for defence and security applications. To realize the full potential of biotechnology and bio-inspiration, there is a need to define specific requirements to meet the challenges of the changing world and its threats. One approach to assisting the defence and security communities in defining their requirements is through the use of a conceptual model. The distributed or intelligent autonomous sensing (DIAS) system is one such model. The DIAS model is not necessarily aimed at a single component, for instance a sensor, but can include a system, or even a system of systems in the same way that a single organism, a multi-cellular organism or group of organisms is configured. This paper provides an overview of the challenges to and opportunities for bio-inspired sensors and systems together with examples of how they are being implemented. Examples focus on both learning new things from biological organisms that have application to the defence and security forces and adapting known discoveries in biology and biochemistry for practical use by these communities.

  7. Which visual functions depend on intermediate visual regions? Insights from a case of developmental visual form agnosia.

    Science.gov (United States)

    Gilaie-Dotan, Sharon

    2016-03-01

    A key question in visual neuroscience is the causal link between specific brain areas and perceptual functions; which regions are necessary for which visual functions? While the contribution of primary visual cortex and high-level visual regions to visual perception has been extensively investigated, the contribution of intermediate visual areas (e.g. V2/V3) to visual processes remains unclear. Here I review more than 20 visual functions (early, mid, and high-level) of LG, a developmental visual agnosic and prosopagnosic young adult, whose intermediate visual regions function in a significantly abnormal fashion as revealed through extensive fMRI and ERP investigations. While expectedly, some of LG's visual functions are significantly impaired, some of his visual functions are surprisingly normal (e.g. stereopsis, color, reading, biological motion). During the period of eight-year testing described here, LG trained on a perceptual learning paradigm that was successful in improving some but not all of his visual functions. Following LG's visual performance and taking into account additional findings in the field, I propose a framework for how different visual areas contribute to different visual functions, with an emphasis on intermediate visual regions. Thus, although rewiring and plasticity in the brain can occur during development to overcome and compensate for hindering developmental factors, LG's case seems to indicate that some visual functions are much less dependent on strict hierarchical flow than others, and can develop normally in spite of abnormal mid-level visual areas, thereby probably less dependent on intermediate visual regions.

  8. Development of Biomimetic Squid-Inspired Suckers

    Institute of Scientific and Technical Information of China (English)

    Jinping Hou; Edward Wright; Richard H. C. Bonser; George Jeronimidis

    2012-01-01

    Biomechanical properties of squid suckers were studied to provide inspiration for the development of sucker artefacts for a robotic octopus.Mechanical support of the rings found inside squid suckers was studied by bending tests.Tensile tests were carried out to study the maximum possible sucking force produced by squid suckers based on the strength of sucker stalks,normalized by the sucking areas.The squid suckers were also directly tested to obtain sucking forces by a special testing arrangement.Inspired by the squid suckers,three types of sucker artefacts were developed for the arm skin of an octopus inspired robot.The first sucker artefact made of knitted nylon sheet reinforced silicone rubber has the same shape as the squid suckers.Like real squid suckers,this type of artefact also has a stalk that is connected to the arm skin and a ring to give radial support.The second design is a straight cylindrical structure with uniform wall thickness made of silicone rubber.One end of the cylinder is directly connected to the arm skin and the other end is open.The final design of the sucker has a cylindrical base and a concave meniscus top.The meniscus was formed naturally using the surface tension of silicone gel,which leads to a higher level of the liquid around the edge of a container.The wall thickness decreases towards the tip of the sucker opening.Sucking forces of all three types of sucker artefacts were measured.Advantages and disadvantages of each sucker type were discussed.The final design of suckers has been implemented to the arm skin prototypes.

  9. Wormhole inspired by non-commutative geometry

    Energy Technology Data Exchange (ETDEWEB)

    Rahaman, Farook, E-mail: rahaman@iucaa.ernet.in [Department of Mathematics, Jadavpur University, Kolkata 700032, West Bengal (India); Karmakar, Sreya, E-mail: sreya.karmakar@gmail.com [Department of Physics, Calcutta Institute of Engineering and Management, Kolkata 700040, West Bengal (India); Karar, Indrani, E-mail: indrani.karar08@gmail.com [Department of Mathematics, Saroj Mohan Institute of Technology, Guptipara, West Bengal (India); Ray, Saibal, E-mail: saibal@iucaa.ernet.in [Department of Physics, Government College of Engineering & Ceramic Technology, Kolkata 700010, West Bengal (India)

    2015-06-30

    In the present Letter we search for a new wormhole solution inspired by noncommutative geometry with the additional condition of allowing conformal Killing vectors (CKV). A special aspect of noncommutative geometry is that it replaces point-like structures of gravitational sources with smeared objects under Gaussian distribution. However, the purpose of this letter is to obtain wormhole solutions with noncommutative geometry as a background where we consider a point-like structure of gravitational object without smearing effect. It is found through this investigation that wormhole solutions exist in this Lorentzian distribution with viable physical properties.

  10. QCD-inspired spectra from Blue's functions

    CERN Document Server

    Nowak, M A; Zahed, I; Nowak, Maciej A; Papp, Gabor; Zahed, Ismail

    1996-01-01

    We use the law of addition in random matrix theory to analyze the spectral distributions of a variety of chiral random matrix models as inspired from QCD whether through symmetries or models. In terms of the Blue's functions recently discussed by Zee, we show that most of the spectral distributions in the macroscopic limit and the quenched approximation, follow algebraically from the discontinuity of a pertinent solution to a cubic (Cardano) or a quartic (Ferrari) equation. We use the end-point equation of the energy spectra in chiral random matrix models to argue for novel phase structures, in which the Dirac density of states plays the role of an order parameter.

  11. QCD-inspired spectra from Blue's functions

    Science.gov (United States)

    Nowak, Maciej A.; Papp, Gábor; Zahed, Ismail

    1996-02-01

    We use the law of addition in random matrix theory to analyze the spectral distributions of a variety of chiral random matrix models as inspired from QCD whether through symmetries or models. In terms of the Blue's functions recently discussed by Zee, we show that most of the spectral distributions in the macroscopic limit and the quenched approximation, follow algebraically from the discontinuity of a pertinent solution to a cubic (Cardano) or a quartic (Ferrari) equation. We use the end-point equation of the energy spectra in chiral random matrix models to argue for novel phase structures, in which the Dirac density of states plays the role of an order parameter.

  12. Oil Price Trackers Inspired by Immune Memory

    CERN Document Server

    Wilson, WIlliam; Aickelin, Uwe

    2010-01-01

    We outline initial concepts for an immune inspired algorithm to evaluate and predict oil price time series data. The proposed solution evolves a short term pool of trackers dynamically, with each member attempting to map trends and anticipate future price movements. Successful trackers feed into a long term memory pool that can generalise across repeating trend patterns. The resulting sequence of trackers, ordered in time, can be used as a forecasting tool. Examination of the pool of evolving trackers also provides valuable insight into the properties of the crude oil market.

  13. Price Trackers Inspired by Immune Memory

    CERN Document Server

    Wilson, William; Aickelin, Uwe

    2010-01-01

    In this paper we outline initial concepts for an immune inspired algorithm to evaluate price time series data. The proposed solution evolves a short term pool of trackers dynamically through a process of proliferation and mutation, with each member attempting to map to trends in price movements. Successful trackers feed into a long term memory pool that can generalise across repeating trend patterns. Tests are performed to examine the algorithm's ability to successfully identify trends in a small data set. The influence of the long term memory pool is then examined. We find the algorithm is able to identify price trends presented successfully and efficiently.

  14. Biomimetic microsensors inspired by marine life

    CERN Document Server

    Kottapalli, Ajay Giri Prakash; Miao, Jianmin; Triantafyllou, Michael S

    2017-01-01

    This book narrates the development of various biomimetic microelectromechanical systems (MEMS) sensors, such as pressure, flow, acceleration, chemical, and tactile sensors, that are inspired by sensing phenomenon that exist in marine life. The research described in this book is multi-faceted and combines the expertise and understanding from diverse fields, including biomimetics, microfabrication, sensor engineering, MEMS design, nanotechnology, and material science. A series of chapters examine the design and fabrication of MEMS sensors that function on piezoresistive, piezoelectric, strain gauge, and chemical sensing principles. By translating nature-based engineering solutions to artificial manmade technology, we could find innovative solutions to critical problems.

  15. Student Interpretations of Phylogenetic Trees in an Introductory Biology Course

    Science.gov (United States)

    Dees, Jonathan; Momsen, Jennifer L.; Niemi, Jarad; Montplaisir, Lisa

    2014-01-01

    Phylogenetic trees are widely used visual representations in the biological sciences and the most important visual representations in evolutionary biology. Therefore, phylogenetic trees have also become an important component of biology education. We sought to characterize reasoning used by introductory biology students in interpreting taxa…

  16. Bone regeneration strategy inspired by the study of calcification behavior in deer antler.

    Science.gov (United States)

    Shi, Haishan; Yu, Tao; Li, Zhaoyang; Lu, William; Zhang, Ming; Ye, Jiandong

    2015-12-01

    Bone regeneration has attracted much attention from various researchers and inspired numerous strategies for bone formation. In this study, rapid calcification of deer antlers was studied to unravel bone biology by investigating mineral composition, morphology and microstructure. Calcification model was hypothesized and preliminarily established by in vitro experiments. In our model, mineral deposition and phase conversions in the gel matrix were mimicked. Results revealed that mineral metabolism including deposition and phase conversion plays key roles in calcification in vivo, which inspired the bone regeneration strategy with three main components, i.e. enhanced mineral nucleation, mineral ions sources and crystals habits. Rapid mineral metabolism of implant apatite biomaterials was supposed as the critical aspect of bone regeneration. This study will provide a relatively ideal model for peer bone regeneration studies.

  17. New ways of scientific publishing and accessing human knowledge inspired by transdisciplinary approaches

    CERN Document Server

    Gebeshuber, I C

    2010-01-01

    Inspired by interdisciplinary work touching biology and microtribology, the authors propose a new, dynamic way of publishing research results, the establishment of a tree of knowledge and the localisation of scientific articles on this tree. 'Technomimetics' is proposed as a new method of knowledge management in science and technology: it shall help find and organise information in an era of over-information. Such ways of presenting and managing research results would be accessible by people with different kinds of backgrounds and levels of education, and allow for full use of the ever- increasing number of scientific and technical publications. This approach would dramatically change and revolutionize the way we are doing science, and contribute to overcoming the three gaps between the world of ideas, inventors, innovators and investors as introduced by Gebeshuber, Gruber and Drack in 2009 for accelerated scientific and technological breakthroughs to improve the human condition. Inspiration for the developme...

  18. Biophysics and Thermodynamics: The Scientific Building Blocks of Bio-inspired Drug Delivery Nano Systems.

    Science.gov (United States)

    Demetzos, Costas

    2015-06-01

    Biophysics and thermodynamics are considered as the scientific milestones for investigating the properties of materials. The relationship between the changes of temperature with the biophysical variables of biomaterials is important in the process of the development of drug delivery systems. Biophysics is a challenge sector of physics and should be used complementary with the biochemistry in order to discover new and promising technological platforms (i.e., drug delivery systems) and to disclose the 'silence functionality' of bio-inspired biological and artificial membranes. Thermal analysis and biophysical approaches in pharmaceuticals present reliable and versatile tools for their characterization and for the successful development of pharmaceutical products. The metastable phases of self-assembled nanostructures such as liposomes should be taken into consideration because they represent the thermal events can affect the functionality of advanced drug delivery nano systems. In conclusion, biophysics and thermodynamics are characterized as the building blocks for design and development of bio-inspired drug delivery systems.

  19. Achieving Small World Properties using Bio-Inspired Techniques in Wireless Networks

    CERN Document Server

    Agarwal, Rachit; Gauthier, Vincent; Becker, Monique; Yeo, Chai Kiat; Lee, Bu Sung

    2011-01-01

    Self-Organization properties of the nodes play an important role in an autonomous wireless sensor environment in achieving network wide characteristics. Self-Organization can be used to achieve small world characteristics in a network. In real networks, however, where there is non-uniform distribution of nodes and overall connectivity of the network is less, achieving small world properties while increasing connectivity must be studied. We believe that network connectivity can be increased and small world properties can be achieved with the help of beamforming, biologically inspired algorithms and using local information. Most of the researches performed in direction of achieving above mentioned goals in wireless networks assume knowledge of network with either heterogeneous or hybrid uniform deployment. We propose that without the knowledge of the global environment or introduction of any special features in the network, we can achieve our goal with the help of inspirations from the nature in a non-uniform n...

  20. Distinct failure modes in bio-inspired 3D-printed staggered composites under non-aligned loadings

    Science.gov (United States)

    Slesarenko, Viacheslav; Kazarinov, Nikita; Rudykh, Stephan

    2017-03-01

    The superior mechanical properties of biological materials originate in their complex hierarchical microstructures, combining stiff and soft constituents at different length scales. In this work, we employ a three-dimensional multi-materials printing to fabricate the bio-inspired staggered composites, and study their mechanical properties and failure mechanisms. We observe that bio-inspired staggered composites with inclined stiff tablets are able to undergo two different failure modes, depending on the inclination angle. We find that such artificial structure demonstrates high toughness only under loading applied at relatively small angle to the tablets stacking direction, while for higher angles the composites fail catastrophically. This aspect of the failure behavior was captured experimentally as well as by means of the finite element analysis. We show that even a relatively simple failure model with a strain energy limiter, can be utilized to qualitatively distinguish these two different modes of failure, occurring in the artificial bio-inspired composites.

  1. Human Vision Inspired Based Image Illumination Enhancement by Using Local Singular Value Decomposition and Discrete Wavelet Transform

    Directory of Open Access Journals (Sweden)

    Gholamreza Anbarjafari

    2015-01-01

    Full Text Available Recently, many computer vision applications are being inspired by human behavior, or human visual system. Also it is known that illumination issues have always been an important problem in many image processing applications. In this work we propose a new image illumination enhancement technique which is inspired from the human visual system behavior on illumination correction. The proposed technique uses local singular value decomposition (SVD and discrete wavelet transforms (DWT, inspired from the fact that human visual system equalizes a scene by disregarding the extreme illuminated areas. In other words, human brain uses local illumination enhancement and this localization is based on the extreme illuminations, e.g. existence or absence of too much light. In this technique, after dividing the image into several locals, each local is converted into the DWT domain and after updating the singular value matrix of the respective low-low subband, the local is reconstructed by using inverse DWT (IDWT. Combination of locals results in the equalized image. The technique is compared with the standard general histogram equalization (GHE and local histogram equalization (LHE. The experimental results are showing the superiority of the proposed method over the aforementioned techniques.

  2. Visual comparison for information visualization

    KAUST Repository

    Gleicher, M.

    2011-09-07

    Data analysis often involves the comparison of complex objects. With the ever increasing amounts and complexity of data, the demand for systems to help with these comparisons is also growing. Increasingly, information visualization tools support such comparisons explicitly, beyond simply allowing a viewer to examine each object individually. In this paper, we argue that the design of information visualizations of complex objects can, and should, be studied in general, that is independently of what those objects are. As a first step in developing this general understanding of comparison, we propose a general taxonomy of visual designs for comparison that groups designs into three basic categories, which can be combined. To clarify the taxonomy and validate its completeness, we provide a survey of work in information visualization related to comparison. Although we find a great diversity of systems and approaches, we see that all designs are assembled from the building blocks of juxtaposition, superposition and explicit encodings. This initial exploration shows the power of our model, and suggests future challenges in developing a general understanding of comparative visualization and facilitating the development of more comparative visualization tools. © The Author(s) 2011.

  3. Bio-inspired self-shaping ceramics

    Science.gov (United States)

    Bargardi, Fabio L.; Le Ferrand, Hortense; Libanori, Rafael; Studart, André R.

    2016-01-01

    Shaping ceramics into complex and intricate geometries using cost-effective processes is desirable in many applications but still remains an open challenge. Inspired by plant seed dispersal units that self-fold on differential swelling, we demonstrate that self-shaping can be implemented in ceramics by programming the material's microstructure to undergo local anisotropic shrinkage during heat treatment. Such microstructural design is achieved by magnetically aligning functionalized ceramic platelets in a liquid ceramic suspension, subsequently consolidated through an established enzyme-catalysed reaction. By fabricating alumina compacts exhibiting bio-inspired bilayer architectures, we achieve deliberate control over shape change during the sintering step. Bending, twisting or combinations of these two basic movements can be successfully programmed to obtain a myriad of complex shapes. The simplicity and the universality of such a bottom-up shaping method makes it attractive for applications that would benefit from low-waste ceramic fabrication, temperature-resistant interlocking structures or unusual geometries not accessible using conventional top–down manufacturing. PMID:28008930

  4. Bio-inspired self-shaping ceramics

    Science.gov (United States)

    Bargardi, Fabio L.; Le Ferrand, Hortense; Libanori, Rafael; Studart, André R.

    2016-12-01

    Shaping ceramics into complex and intricate geometries using cost-effective processes is desirable in many applications but still remains an open challenge. Inspired by plant seed dispersal units that self-fold on differential swelling, we demonstrate that self-shaping can be implemented in ceramics by programming the material's microstructure to undergo local anisotropic shrinkage during heat treatment. Such microstructural design is achieved by magnetically aligning functionalized ceramic platelets in a liquid ceramic suspension, subsequently consolidated through an established enzyme-catalysed reaction. By fabricating alumina compacts exhibiting bio-inspired bilayer architectures, we achieve deliberate control over shape change during the sintering step. Bending, twisting or combinations of these two basic movements can be successfully programmed to obtain a myriad of complex shapes. The simplicity and the universality of such a bottom-up shaping method makes it attractive for applications that would benefit from low-waste ceramic fabrication, temperature-resistant interlocking structures or unusual geometries not accessible using conventional top-down manufacturing.

  5. Autobiography: Inspiring new visions of teacher learning

    Directory of Open Access Journals (Sweden)

    Irene Simon

    2006-05-01

    Full Text Available Abstract: The purpose of this article is to broaden the tradition of autobiography by using it as a way in which teachers can identify sources of inspiration in their educational experience. In the process, my aim is to make explicit the links between autobiography, learning and meta learning. Extending autobiographical inquiry to include different levels at which learning takes place serves to highlight the importance not only of the individual context of learning (the private self, but also the possibility of learning and constructing meaning from autobiography in dialogue with others. This article identifies four levels of learning-how-to-learn from autobiography. These levels are: 1. learning from autobiographical writing; 2. learning through intergenerational dialogues; 3. developmental learning through the career stages; and 4. whole group co-constructive learning. My ultimate goal is two fold. Firstly, to use these levels of learning to identify operational definitions of inspiration based on significant events and experiences in teacher’s personal stories. Secondly to identify a meta research orientation for linking autobiography with learning and meta-learning.

  6. Visual Education

    DEFF Research Database (Denmark)

    Buhl, Mie; Flensborg, Ingelise

    2010-01-01

    The intrinsic breadth of various types of images creates new possibilities and challenges for visual education. The digital media have moved the boundaries between images and other kinds of modalities (e.g. writing, speech and sound) and have augmented the possibilities for integrating the functi......The intrinsic breadth of various types of images creates new possibilities and challenges for visual education. The digital media have moved the boundaries between images and other kinds of modalities (e.g. writing, speech and sound) and have augmented the possibilities for integrating...... the functions of the images and visuality in new forms of knowledge-building beyond traditional boundaries of school subjects. New learning cultures emerge and place the visual skills of decoding and meaning-making in the centre of future competences for citizens in a globalised world.   This paper discusses...... the learning potential of images and visuality from two perspectives: 1) The perspective of digital media which are assumed to form an increasing part of experience and communication from the use of internet, tv and mobile devices. 2) The perspective of culture where images and visualisations are assumed...

  7. Kinds of inspiration in interaction design

    DEFF Research Database (Denmark)

    Halskov, Kim

    2010-01-01

    In this paper, we explore the role of sources of inspiration in interaction design. We identify four strategies for relating sources of inspiration to emerging ideas: selection; adaptation; translation; and combination. As our starting point, we argue that sources of inspiration are a form...... of knowledge crucial to creativity. Our research is based on empirical findings arising from the use of Inspiration Card Workshops, which are collaborative design events in which domain and technology insight are combined to create design concepts. In addition to the systematically introduced sources...

  8. Visualizing Transformation

    DEFF Research Database (Denmark)

    Pedersen, Pia

    2012-01-01

    Transformation, defined as the step of extracting, arranging and simplifying data into visual form (M. Neurath, 1974), was developed in connection with ISOTYPE (International System Of TYpographic Picture Education) and might well be the most important legacy of Isotype to the field of graphic...... design. Recently transformation has attracted renewed interest because of the book ‘The Transformer’ written by Robin Kinross and Marie Neurath. My on-going research project, summarized in this paper, identifies and depicts the essential principles of data visualization underlying the process...... of transformation with reference to Marie Neurath’s sketches on the Bilston Project. The material has been collected at the Otto and Marie Neurath Collection housed at the University of Reading, UK. By using data visualization as a research method to look directly into the process of transformation the project...

  9. Visual cognition

    Energy Technology Data Exchange (ETDEWEB)

    Pinker, S.

    1985-01-01

    This collection of research papers on visual cognition first appeared as a special issue of Cognition: International Journal of Cognitive Science. The study of visual cognition has seen enormous progress in the past decade, bringing important advances in our understanding of shape perception, visual imagery, and mental maps. Many of these discoveries are the result of converging investigations in different areas, such as cognitive and perceptual psychology, artificial intelligence, and neuropsychology. This volume is intended to highlight a sample of work at the cutting edge of this research area for the benefit of students and researchers in a variety of disciplines. The tutorial introduction that begins the volume is designed to help the nonspecialist reader bridge the gap between the contemporary research reported here and earlier textbook introductions or literature reviews.

  10. Targeting Platinum Compounds: synthesis and biological activity

    OpenAIRE

    VAN ZUTPHEN, Steven

    2005-01-01

    Inspired by cisplatin, the inorganic drug discovered by Barnett Rosenberg in 1965, the research described in this thesis uses targeting ligands, or ligands varied in a combinatorial fashion, to find platinum complexes with more specific modes of action. These studies have lead to the development of novel (solid-phase) synthetic methods and to the discovery of several compounds with promising biological properties.

  11. AER synthetic generation in hardware for bio-inspired spiking systems

    Science.gov (United States)

    Linares-Barranco, Alejandro; Linares-Barranco, Bernabe; Jimenez-Moreno, Gabriel; Civit-Balcells, Anton

    2005-06-01

    Address Event Representation (AER) is an emergent neuromorphic interchip communication protocol that allows for real-time virtual massive connectivity between huge number neurons located on different chips. By exploiting high speed digital communication circuits (with nano-seconds timings), synaptic neural connections can be time multiplexed, while neural activity signals (with mili-seconds timings) are sampled at low frequencies. Also, neurons generate 'events' according to their activity levels. More active neurons generate more events per unit time, and access the interchip communication channel more frequently, while neurons with low activity consume less communication bandwidth. When building multi-chip muti-layered AER systems it is absolutely necessary to have a computer interface that allows (a) to read AER interchip traffic into the computer and visualize it on screen, and (b) convert conventional frame-based video stream in the computer into AER and inject it at some point of the AER structure. This is necessary for test and debugging of complex AER systems. This paper addresses the problem of converting, in a computer, a conventional frame-based video stream into the spike event based representation AER. There exist several proposed software methods for synthetic generation of AER for bio-inspired systems. This paper presents a hardware implementation for one method, which is based on Linear-Feedback-Shift-Register (LFSR) pseudo-random number generation. The sequence of events generated by this hardware, which follows a Poisson distribution like a biological neuron, has been reconstructed using two AER integrator cells. The error of reconstruction for a set of images that produces different traffic loads of event in the AER bus is used as evaluation criteria. A VHDL description of the method, that includes the Xilinx PCI Core, has been implemented and tested using a general purpose PCI-AER board. This PCI-AER board has been developed by authors, and uses

  12. A Model of the Superior Colliculus Predicts Fixation Locations during Scene Viewing and Visual Search.

    Science.gov (United States)

    Adeli, Hossein; Vitu, Françoise; Zelinsky, Gregory J

    2017-02-08

    Modern computational models of attention predict fixations using saliency maps and target maps, which prioritize locations for fixation based on feature contrast and target goals, respectively. But whereas many such models are biologically plausible, none have looked to the oculomotor system for design constraints or parameter specification. Conversely, although most models of saccade programming are tightly coupled to underlying neurophysiology, none have been tested using real-world stimuli and tasks. We combined the strengths of these two approaches in MASC, a model of attention in the superior colliculus (SC) that captures known neurophysiological constraints on saccade programming. We show that MASC predicted the fixation locations of humans freely viewing naturalistic scenes and performing exemplar and categorical search tasks, a breadth achieved by no other existing model. Moreover, it did this as well or better than its more specialized state-of-the-art competitors. MASC's predictive success stems from its inclusion of high-level but core principles of SC organization: an over-representation of foveal information, size-invariant population codes, cascaded population averaging over distorted visual and motor maps, and competition between motor point images for saccade programming, all of which cause further modulation of priority (attention) after projection of saliency and target maps to the SC. Only by incorporating these organizing brain principles into our models can we fully understand the transformation of complex visual information into the saccade programs underlying movements of overt attention. With MASC, a theoretical footing now exists to generate and test computationally explicit predictions of behavioral and neural responses in visually complex real-world contexts.SIGNIFICANCE STATEMENT The superior colliculus (SC) performs a visual-to-motor transformation vital to overt attention, but existing SC models cannot predict saccades to visually

  13. Effect of inspiration on airway dimensions measured in maximal inspiration CT images of subjects without airflow limitation

    DEFF Research Database (Denmark)

    Petersen, Jens; Wille, Mathilde M.W.; Raket, Lars Lau;

    2014-01-01

    OBJECTIVES: To study the effect of inspiration on airway dimensions measured in voluntary inspiration breath-hold examinations. METHODS: 961 subjects with normal spirometry were selected from the Danish Lung Cancer Screening Trial. Subjects were examined annually for five years with low-dose CT. ...... • The effect of inspiration is greater in higher-generation (more peripheral) airways • Airways of generation 5 and beyond are as distensible as lung parenchyma • Airway dimensions measured from CT should be adjusted for inspiration level....

  14. Geometric uncertainties in voluntary deep inspiration breath hold radiotherapy for locally advanced lung cancer

    DEFF Research Database (Denmark)

    Josipovic, Mirjana; Persson, Gitte Bjørnsen Fredberg; Dueck, Jenny;

    2016-01-01

    BACKGROUND AND PURPOSE: Deep inspiration breath hold (DIBH) increases lung volume and can potentially reduce treatment-related toxicity in locally advanced lung cancer. We estimated geometric uncertainties in visually guided voluntary DIBH and derived the appropriate treatment margins for different...... image-guidance strategies. MATERIAL AND METHODS: Seventeen patients were included prospectively. An optical marker-based respiratory monitoring with visual guidance enabled comfortable DIBHs, adjusted to each patient's performance. All patients had three consecutive DIBH CTs at each of the treatment...... fractions 2, 16 and 31. DIBH reproducibility was evaluated as inter- and intra-fractional variations in lung volume, tumour position and differential motion between primary tumour and mediastinal lymph nodes. RESULTS: Lung volume increased by median 60% in DIBH. Inter- and intra-fractional lung volume...

  15. Musca domestica inspired machine vision system with hyperacuity

    Science.gov (United States)

    Riley, Dylan T.; Harman, William M.; Tomberlin, Eric; Barrett, Steven F.; Wilcox, Michael; Wright, Cameron H. G.

    2005-05-01

    Musca domestica, the common house fly, has a simple yet powerful and accessible vision system. Cajal indicated in 1885 the fly's vision system is the same as in the human retina. The house fly has some intriguing vision system features such as fast, analog, parallel operation. Furthermore, it has the ability to detect movement and objects at far better resolution than predicted by photoreceptor spacing, termed hyperacuity. We are investigating the mechanisms behind these features and incorporating them into next generation vision systems. We have developed a prototype sensor that employs a fly inspired arrangement of photodetectors sharing a common lens. The Gaussian shaped acceptance profile of each sensor coupled with overlapped sensor field of views provide the necessary configuration for obtaining hyperacuity data. The sensor is able to detect object movement with far greater resolution than that predicted by photoreceptor spacing. We have exhaustively tested and characterized the sensor to determine its practical resolution limit. Our tests coupled with theory from Bucklew and Saleh (1985) indicate that the limit to the hyperacuity response may only be related to target contrast. We have also implemented an array of these prototype sensors which will allow for two - dimensional position location. These high resolution, low contrast capable sensors are being developed for use as a vision system for an autonomous robot and the next generation of smart wheel chairs. However, they are easily adapted for biological endoscopy, downhole monitoring in oil wells, and other applications.

  16. Designing allostery-inspired response in mechanical networks

    Science.gov (United States)

    Rocks, Jason W.; Pashine, Nidhi; Bischofberger, Irmgard; Goodrich, Carl P.; Liu, Andrea J.; Nagel, Sidney R.

    2017-01-01

    Recent advances in designing metamaterials have demonstrated that global mechanical properties of disordered spring networks can be tuned by selectively modifying only a small subset of bonds. Here, using a computationally efficient approach, we extend this idea to tune more general properties of networks. With nearly complete success, we are able to produce a strain between any two target nodes in a network in response to an applied source strain on any other pair of nodes by removing only ∼1% of the bonds. We are also able to control multiple pairs of target nodes, each with a different individual response, from a single source, and to tune multiple independent source/target responses simultaneously into a network. We have fabricated physical networks in macroscopic 2D and 3D systems that exhibit these responses. This work is inspired by the long-range coupled conformational changes that constitute allosteric function in proteins. The fact that allostery is a common means for regulation in biological molecules suggests that it is a relatively easy property to develop through evolution. In analogy, our results show that long-range coupled mechanical responses are similarly easy to achieve in disordered networks. PMID:28223534

  17. Colloidal-based additive manufacturing of bio-inspired composites

    Science.gov (United States)

    Studart, Andre R.

    Composite materials in nature exhibit heterogeneous architectures that are tuned to fulfill the functional demands of the surrounding environment. Examples range from the cellulose-based organic structure of plants to highly mineralized collagen-based skeletal parts like bone and teeth. Because they are often utilized to combine opposing properties such as strength and low-density or stiffness and wear resistance, the heterogeneous architecture of natural materials can potentially address several of the technical limitations of artificial homogeneous composites. However, current man-made manufacturing technologies do not allow for the level of composition and fiber orientation control found in natural heterogeneous systems. In this talk, I will present two additive manufacturing technologies recently developed in our group to build composites with exquisite architectures only rivaled by structures made by living organisms in nature. Since the proposed techniques utilize colloidal suspensions as feedstock, understanding the physics underlying the stability, assembly and rheology of the printing inks is key to predict and control the architecture of manufactured parts. Our results will show that additive manufacturing routes offer a new exciting pathway for the fabrication of biologically-inspired composite materials with unprecedented architectures and functionalities.

  18. Functional surfaces for tribological applications: inspiration and design

    Science.gov (United States)

    Abdel-Aal, Hisham A.

    2016-12-01

    Surface texturing has been recognized as a method for enhancing the tribological properties of surfaces for many years. Adding a controlled texture to one of two faces in relative motion can have many positive effects, such as reduction of friction and wear and increase in load capacity. To date, the true potential of texturing has not been realized not because of the lack of enabling texturing technologies but because of the severe lack of detailed information about the mechanistic functional details of texturing in a tribological situation. Experimental as well as theoretical analysis of textured surfaces define important metrics for performance evaluation. These metrics represent the interaction between geometry of the texturing element and surface topology. To date, there is no agreement on the optimal values that should be implemented given a particular surface. More importantly, a well-defined methodology for the generation of deterministic textures of optimized designs virtually does not exist. Nature, on the other hand, offers many examples of efficient texturing strategies (geometries and topologies) specifically applied to mitigate frictional effects in a variety of situations. Studying these examples may advance the technology of surface engineering. This paper therefore, provides a comparative review of surface texturing that manifest viable synergy between tribology and biology. We attempt to provide successful emerging examples where borrowing from nature has inspired viable surface solutions that address difficult tribological problems both in dry and lubricated contact situations.

  19. Dielectric elastomer actuators for octopus inspired suction cups.

    Science.gov (United States)

    Follador, M; Tramacere, F; Mazzolai, B

    2014-09-25

    Suction cups are often found in nature as attachment strategy in water. Nevertheless, the application of the artificial counterpart is limited by the dimension of the actuators and their usability in wet conditions. A novel design for the development of a suction cup inspired by octopus suckers is presented. The main focus of this research was on the modelling and characterization of the actuation unit, and a first prototype of the suction cup was realized as a proof of concept. The actuation of the suction cup is based on dielectric elastomer actuators. The presented device works in a wet environment, has an integrated actuation system, and is soft. The dimensions of the artificial suction cups are comparable to proximal octopus suckers, and the attachment mechanism is similar to the biological counterpart. The design approach proposed for the actuator allows the definition of the parameters for its development and for obtaining a desired pressure in water. The fabricated actuator is able to produce up to 6 kPa of pressure in water, reaching the maximum pressure in less than 300 ms.

  20. Ayurnutrigenomics: Ayurveda-inspired personalized nutrition from inception to evidence.

    Science.gov (United States)

    Banerjee, Subhadip; Debnath, Parikshit; Debnath, Pratip Kumar

    2015-10-01

    Ayurveda proclaims food and drugs are intersecting concepts that are vital for human survival and for the prevention and mitigation of diseases. Food interferes with the molecular mechanisms of an organism's "physiome". It is consumed in large amounts compared to any drug. Hence, research on its effect and interaction with genome is highly relevant toward understanding diseases and their therapies. Ayurgenomics presents a personalized approach in the predictive, preventive, and curative aspects of stratified medicine with molecular variability, which embodies the study of interindividual variability due to genetic variability in humans for assessing susceptibility, and establishing diagnosis and prognosis, mainly on the basis of the constitution type of a person's Prakriti. Ayurnutrigenomics is an emerging field of interest pervading Ayurveda systems biology, where the selection of a suitable dietary, therapeutic, and lifestyle regime is made on the basis of clinical assessment of an individual maintaining one's Prakriti. This Ayurveda-inspired concept of personalized nutrition is a novel concept of nutrigenomic research for developing personalized functional foods and nutraceuticals suitable for one's genetic makeup with the help of Ayurveda. Here, we propose and present this novel concept of Ayurnutrigenomics and its emerging areas of research, which may unfold future possibilities toward smart yet safe therapeutics.