WorldWideScience

Sample records for biological nitrogen transformation

  1. Process of inorganic nitrogen transformation and design of kinetics model in the biological aerated filter reactor.

    Science.gov (United States)

    Yan, Gang; Xu, Xia; Yao, Lirong; Lu, Liqiao; Zhao, Tingting; Zhang, Wenyi

    2011-04-01

    As one of the plug-flow reactors, biological aerated filter (BAF) reactor was divided into four sampling sectors to understand the characteristics of elemental nitrogen transformation during the reaction process, and then the different characteristics of elemental nitrogen transformation caused by different NH(3)-N loadings, biological quantities and activities in each section were obtained. The results showed that the total transformation ratio in the nitrifying reactor was more than 90% in the absence of any organic carbon resource, at the same time, more than 65% NH(3)-N in the influent were nitrified at the filter height of 70 cm below under the conditions of the influent runoff 9-19 L/h, the gas-water ratio 4-5:1, the dissolved oxygen 3.0-5.8 mg/L and the NH(3)-N load 0.28-0.48 kg NH(3)-N/m(3) d. On the base of the Eckenfelder mode, the kinetics equation of the NH(3)-N transformation along the reactor was S(e)=S(0) exp(-0.0134D/L(1.2612)).

  2. Molecular Biology of Nitrogen Fixation

    Science.gov (United States)

    Shanmugam, K. T.; Valentine, Raymond C.

    1975-01-01

    Reports that as a result of our increasing knowledge of the molecular biology of nitrogen fixation it might eventually be possible to increase the biological production of nitrogenous fertilizer from atmospheric nitrogen. (GS)

  3. Process of nitrogen transformation and microbial community structure in the Fe(0)-carbon-based bio-carrier filled in biological aerated filter.

    Science.gov (United States)

    Deng, Shihai; Li, Desheng; Yang, Xue; Zhu, Shanbin; Li, Jinlong

    2016-04-01

    Nitrogen pollutants in low-organic carbon wastewater are difficult to biodegrade. Therefore, the Fe(0)-carbon-based bio-carrier (FCBC) was firstly used as hydrogen producer in a biological-aerated filter (BAF) to make up for the lack of organic carbon in biological nitrogen removal. Physical and chemical properties of FCBC were detected and compared in this study. The nitrogen removal rate for low COD/TN ratio wastewater, nitrogen transformation process, and microbial communities in the FCBC filled in BAF were investigated. Results showed that the nitrogen removal rates was 0.38-0.41 kg N m(-3) day(-1) in the FCBC filled BAF and reached 0.62 kg N m(-3) day(-1) within the filter depth of 60-80 cm, under the conditions of the dissolved oxygen 3.5 ± 0.2 mg L(-1) and the inlet pH 7.2 ± 0.1. Hydrogenophaga (using hydrogen as electron donor), Sphaerotilus (absorbing [Fe(3+)]), Nitrospira (nitrificaion), and Nitrosomonas (ammonia oxidation) were found to be the predominant genera in the reactor. The reaction schemes in the FCBC filled in BAF was calculated: hydrogen and [Fe(3+)] were produced by Fe(0)-C galvanic cells in the FCBC, ammonia was oxidized into nitrate by Nitrosomonas and Nitrospira genera, hydrogen was used as electron donors by Hydrogenophaga genus to reduce nitrate into N2, and [Fe(3+)] was partly absorbed by Sphaerotilus and diverted via sludge discharging.

  4. Inorganic nitrogen transformations in the bed of the Shingobee River, Minnesota: Integrating hydrologic and biological processes using sediment perfusion cores

    Science.gov (United States)

    Sheibley, R.W.; Duff, J.H.; Jackman, A.P.; Triska, F.J.

    2003-01-01

    Inorganic N transformations were examined in streambed sediments from the Shingobee River using sediment perfusion cores. The experimental design simulated groundwater-stream water mixing within sediment cores, which provided a well-defined one-dimensional representation of in situ hydrologic conditions. Two distinct hydrologic and chemical settings were preserved in the sediment cores: the lowermost sediments, perfused with groundwater, remained anaerobic during the incubations, whereas the uppermost sediments, perfused with oxic water pumped from the overlying water column, simulated stream water penetration into the bed. The maintenance of oxic and anoxic zones formed a biologically active aerobic-anaerobic interface. Ammonium (NH4+) dissolved in groundwater was transported conservatively through the lower core zone but was removed as it mixed with aerated recycle water. Concurrently, a small quantity of nitrate (NO3-) equaling ???25% of the NH4+ loss was produced in the upper sediments. The NH4+ and NO3- profiles in the uppermost sediments resulted from coupled nitrification-denitrification, because assimilation and sorption were negligible. We hypothesize that anaerobic microsites within the aerated upper sediments supported denitrification. Rates of nitrification and denitrification in the perfusion cores ranged 42-209 and 53-160 mg N m-2 day-1, respectively. The use of modified perfusion cores permitted the identification and quantification of N transformations and verified process control by surface water exchange into the shallow hyporheic zone of the Shingobee River.

  5. Nitrogen transformations in stratified aquatic microbial ecosystems

    DEFF Research Database (Denmark)

    Revsbech, Niels Peter; Risgaard-Petersen, N.; Schramm, Andreas;

    2006-01-01

    Abstract  New analytical methods such as advanced molecular techniques and microsensors have resulted in new insights about how nitrogen transformations in stratified microbial systems such as sediments and biofilms are regulated at a µm-mm scale. A large and ever-expanding knowledge base about n...

  6. Nitrogen transformations during pig manure composting

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Composting is now suggested as one of the environmentallyand friendly alternative method for disposal of solid organic wastes, as it leads to minimization, stabilization, and utilization of organic waste. Transformations of nitrogen were investigated inco-composting of pig manure with different amendments, such as sawdust and leaves. Samples were analyzed for pH, total-N, soluble NH4-N, soluble NO3-N and soluble organic-N. The total-N increased after 63 days of composting, as well as the soluble NO3-N and soluble organic-N. Soluble NH4-N increased significantly and showed peak values at day 7, thereafter decreased sharply and gradually to lower levels. Seed germination index (GI) showed that co-composting of pig manure with sawdust reached maturity after 49 days of composting, while co-composting of pig manure with sawdust and leaves required shorter time for 35 days. Soluble NH4-N was significantly negatively (P<0.05), while soluble NO3-N and soluble organic-N were significantly positively (P<0.05), correlated with seed germination index (GI). Addition of leaves in co-composting of pig manure with sawdust had no significant impacts on nitrogen transformations, but it was beneficial for maturity of pig manure compost.

  7. Biological factors influencing nitrogen transformation in wheat fields of lime concreted black soils and their response to different nitrogen supplications%影响砂姜黑土麦田土壤氮素转化的生物学因素及其对供氮量的响应

    Institute of Scientific and Technical Information of China (English)

    熊淑萍; 丁世杰; 王小纯; 马新明; 吴懿鑫; 杜盼; 于旭昊

    2016-01-01

    Lime concretion black soil is a typical low-yield field soil in China. It has heavy clay structure and poor permeability, which cause imbalances in effective nutrient supply, low capacity soil nutrient supply and poor production performance. In order to improve crop yields, chemical fertilizer (especially nitrogen fertilizer) has been excessively applied during production seasons. This has led to wastage of agricultural resources and environmental pollution. Soil microbes have always played a predominant role in the processes of soil nitrogen transformation. To provide scientific basis for directional adjustments to control the processes of soil nitrogen transformation, improve nitrogen use efficiency and reduce related negative effects, the processes and mechanisms of nitrogen transformation driven by soil microorganisms were studied. A filed experiment was carried out from 2012 to 2015 in Xiangcheng, Henan Province, China. The experimental setup was a single factorial design with four nitrogen rates (0 kg·hm-2, 120 kg·hm-2, 225 kg·hm-2 and 330 kg·hm-2). The biochemical action intensity of soil nitrogen transformation microorganisms (ammonification, nitrification and denitrification), urease activity, protease activity, net nitrogen mineralization rate, and content of nitrate and ammonium nitrogen of rhizosphere soil were determined at different wheat growth stages to explore the biological factors influencing nitrogen transformation and their response to different nitrogen application in wheat fields of lime concretion black soils. The results showed that the active period of soil nitrogen transformation microorganisms and enzymes was from jointing stage to grain-filling stage. After that, the ammonification intensity, nitrification intensity, urease activity and protease activity decreased. Similarly, the soil net nitrogen mineralization rate reached the highest level at flowering stage. Except for urease activity which increased with increasing nitrogen

  8. Perspectives in Biological Nitrogen Fixation Research

    Institute of Scientific and Technical Information of China (English)

    Qi Cheng

    2008-01-01

    Nitrogen fixation, along with photosynthesis is the basis of all life on earth. Current understanding suggests that no plant fixes its own nitrogen. Some plants (mainly legumes) fix nitrogen via symbiotic anaerobic microorganisms (mainly rhizobia). The nature of biological nitrogen fixation is that the dinitrogenase catalyzes the reaction-splitting triple-bond inert atmospheric nitrogen (N2) into organic ammonia molecule (NH3). All known nitrogenases are found to be prokaryotic,multi.complex and normally oxygen liable. Not surprisingly, the engineering of autonomous nitrogen-fixing plants would be a long-term effort because it requires the assembly of a complex enzyme and provision of anaerobic conditions. However,in the light of evolving protein catalysts, the anaerobic enzyme has almost certainly been replaced in many reactions by the more efficient and irreversible aerobic version that uses O2. On the other hand, nature has shown numerous examples of evolutionary convergence where an enzyme catalyzing a highly specific, O2-requiring reaction has an oxygen-independent counterpart, able to carry out the same reaction under anoxic conditions. In this review, I attempt to take the reader on a simplified journey from conventional nitrogenase complex to a possible simplified version of a yet to be discovered Ilght-utilizing nitrogenase.

  9. Database Transformations for Biological Applications

    Energy Technology Data Exchange (ETDEWEB)

    Overton, C.; Davidson, S. B.; Buneman, P.; Tannen, V.

    2001-04-11

    The goal of this project was to develop tools to facilitate data transformations between heterogeneous data sources found throughout biomedical applications. Such transformations are necessary when sharing data between different groups working on related problems as well as when querying data spread over different databases, files and software analysis packages.

  10. 曝气生物滤池中无机氮转化规律与降解数学模型%Transformation Regularity of Inorganic Nitrogen and Mathematical Model of Degradation in Biological Aerated Filter

    Institute of Scientific and Technical Information of China (English)

    夏绍凤

    2012-01-01

    Biological aerated filter (BAF) reactor in which the sewage and gas flow upward through the filtering media layer is one of the pushing reactors. In order to study its characteristics of inorganic nitrogen transformation along the reactor, the reactor was divided into four sampling sites and the different characteristics of inorganic nitrogen transformation caused by different organic loading and NH3-N loading as well as the biological quantity and activity of each section was researched. The result indicates when hydraulic loading rate is 1.13-2.38 m3/m2+h, ratio of air and water is 4-5:1, DO is 2.9-5.9 mg/L and NH3-N loading is 0.25-0.5 kgNH3-N/m3+d without any organic carbon, the major reaction is nitration in the reactor. More than 70 % NH3-N in the influent is nitrified when the relative height of the filter is less than 0.52. Total nitrogen (TN) basically maintains balanced, NO-3 -N increases, and there is few NOj -N in the reactor. According to Eckenfelder model, the kinetics equation of NH3-N transformation is Se = 50exp(-0.013 4D/L1.261 2).%上向流曝气生物滤池反应器(BAF)中的污水、空气从下往上同向流过滤料层,是一种推流式反应器.为研究其沿程无机氮转化特性,试验装置由下至上共设有4个取样口,研究各区间段由于NH3-N负荷、生物数量及活性等不同引起的沿程无机氮转化特性差异.试验结果表明在水力负荷为1.13~2.38 m3/m2·h、气水比为4~5∶1、沿程DO为2.9~5.9 mg/L、NH3-N负荷为0.25~0.5 kgNH3-N/m3·d、不加任何有机碳源的情况下,反应器内以硝化反应为主,进水中70%以上的NH3-N在相对高度0.52以下部分被硝化.曝气生物滤池沿程NO3- -N增加,NO2--N含量较少,TN基本维持平衡.依据Eckenfelder模式,BAF滤池中NH3-N沿程转化动力学方程为:Se=Soexp(-0.013 4D/L1.2612).

  11. The economic impact of future biological nitrogen fixation technologies

    OpenAIRE

    Tauer, Loren W.

    1988-01-01

    The economic impact of some future biological nitrogen fixation technologies are estimated using AGSIM, a dynamic, partial equilibrium, econometric model of the U.S. agricultural sector. Five separate scenarios were modeled: (1) legumes fix more nitrogen, (2) legumes fix more nitrogen with an increase in legumes yields of 10 percent, (3) nitrogen fertilization requirements on all crops are reduced 50 percent with no yield changes, (4) total elimination of nitrogen fertilization and (5) total ...

  12. Transformation of ammonia i biological airfilters

    DEFF Research Database (Denmark)

    Nielsen, Lars Peter; Sørensen, Karen; Andersen, Mathias;

    2007-01-01

    Ammonia is a major compound in ventilation air from animal houses. In biological filters it is with varying efficiency transformed by physical, biological, and chemical processes and ends up as ammonium, nitrate, and nitrite dissolved in water and as dinitrogen, nitrous oxide and nitric oxide...... emitted to the air. To identify the key regulators of these transformations we have combined data from studies of microbiology and performance in 10 experimental and full scale filters of varying design, loading, and management. Inhibition by nitrite controlled ammonium oxidation and pH, while biological...... nitrite oxidation only appeared in locations with minimal ammonia and nitrite levels. Nitrous oxide emission depended on anoxic microsites, and nitric oxide production was associated with nitrite accumulation. Water and biomass management appear to be the important tools for optimization of ammonia...

  13. Nitrogen transformations in wetlands: Effects of water flow patterns

    Energy Technology Data Exchange (ETDEWEB)

    Davidsson, T.

    1997-11-01

    In this thesis, I have studied nitrogen turnover processes in water meadows. A water meadow is a wetland where water infiltrates through the soil of a grassland field. It is hypothesized that infiltration of water through the soil matrix promotes nutrient transformations compared to surface flow of water, by increasing the contact between water, nutrients, soil organic matter and bacteria. I have studied how the balance between nitrogen removal (denitrification, assimilative uptake, adsorption) and release (mineralization, desorption) processes are affected by water flow characteristics. Mass balance studies and direct denitrification measurements at two field sites showed that, although denitrification was high, net nitrogen removal in the water meadows was poor. This was due to release of ammonium and dissolved organic nitrogen (DON) from the soils. In laboratory studies, using {sup 15}N isotope techniques, I have shown that nitrogen turnover is considerably affected by hydrological conditions and by soil type. Infiltration increased virtually all the nitrogen processes, due to deeper penetration of nitrate and oxygen, and extended zones of turnover processes. On the contrary, soils and sediments with surface water flow, diffusion is the main transfer mechanism. The relation between release and removal processes sometimes resulted in shifts towards net nitrogen production. This occurred in infiltration treatments when ammonium efflux was high in relation to denitrification. It was concluded that ammonium and DON was of soil origin and hence not a product of dissimilatory nitrate reduction to ammonium. Both denitrification potential and mineralization rates were higher in peaty than in sandy soil. Vertical or horizontal subsurface flow is substantial in many wetland types, such as riparian zones, tidal salt marshes, fens, root-zone systems and water meadows. Moreover, any environment where aquatic and terrestrial ecosystems meet, and where water level fluctuates

  14. The berkeley wavelet transform: a biologically inspired orthogonal wavelet transform.

    Science.gov (United States)

    Willmore, Ben; Prenger, Ryan J; Wu, Michael C-K; Gallant, Jack L

    2008-06-01

    We describe the Berkeley wavelet transform (BWT), a two-dimensional triadic wavelet transform. The BWT comprises four pairs of mother wavelets at four orientations. Within each pair, one wavelet has odd symmetry, and the other has even symmetry. By translation and scaling of the whole set (plus a single constant term), the wavelets form a complete, orthonormal basis in two dimensions. The BWT shares many characteristics with the receptive fields of neurons in mammalian primary visual cortex (V1). Like these receptive fields, BWT wavelets are localized in space, tuned in spatial frequency and orientation, and form a set that is approximately scale invariant. The wavelets also have spatial frequency and orientation bandwidths that are comparable with biological values. Although the classical Gabor wavelet model is a more accurate description of the receptive fields of individual V1 neurons, the BWT has some interesting advantages. It is a complete, orthonormal basis and is therefore inexpensive to compute, manipulate, and invert. These properties make the BWT useful in situations where computational power or experimental data are limited, such as estimation of the spatiotemporal receptive fields of neurons.

  15. NITROGEN DEPOSITION AND ORGANIC MATTER MANIPULATIONS AFFECT GROSS AND NET NITROGEN TRANSFORMATIONS IN TWO TEMPERATE FORESTS SOILS

    Science.gov (United States)

    Soil nitrogen transformations are intricately linked to carbon transformations. We utilized two existing organic matter manipulation sites in western Oregon, USA and Hungary to investigate these linkages. Our questions were: 1) Does the quantity and quality of organic matter af...

  16. Aerobic and anaerobic incubation: Biological indexes of soil nitrogen availability

    Directory of Open Access Journals (Sweden)

    Kresović Mirjana M.

    2005-01-01

    Full Text Available Our researches have been made on brown forest soil that had been used in long-term experiments set up according to specified fertilization system for over 30 years. We have chosen those experiment variants in which quantities of nitrogen fertilizers were gradually increased. The soil samples taken from 0 cm to 30 cm depth were used to determine biological indexes of nitrogen availability (aerobic and anaerobic incubation. The same samples were also used for pot experiments with oat. Plant and soil parameters obtained in controlled conditions were used for determination of biological indexes reliability in measuring the soil nitrogen availability. On the grounds of correlation analysis, it can be concluded that biological index of nitrogen availability achieved by the anaerobic incubation (without substraction of the initial content of available nitrogen of the investigated brown forest soil is the reliable indicator of soil nitrogen availability. That is not the case with the aerobic incubation in which reliability has not been established.

  17. [Effects of different nitrogen regulators on nitrogen transformation in different soil types].

    Science.gov (United States)

    Liu, Jian-Tao; Xu, Jing; Sun, Zhi-Mei; Cui, Shao-Xiong; Wang, Xue

    2014-10-01

    Laboratory incubation experiments were conducted to compare the inhibitory effects of dicyandiamide (DCD) and 3,5-dimethylpyrazole (DMP) on nitrification in meadow-cinnamon soil and fluvo-aquic soil, the main soil types of North China Plain. The synergistic effect of DMP combined with urease inhibitor hydroquinone (HQ) on nitrogen transformation in fluvo-aquic soil was further studied. The results indicated that, in contrast to DCD, DMP had a stronger inhibitory effect on the nitrification in the two tested soils. In comparison with the treatment without any inhibitor, the soil NH(4+)-N content in the treatment with DMP increased significantly by 149.5%-387.2% at the peak of nitrogen transformation stage, and the soil NO(3-)-N content reduced by 22.3%-55.3%. The inhibitory effects of DCD and DMP in fluvo-aquic soil were both stronger than in meadow-cinnamon soil. In addition, the application of DMP combined with HQ had a significantly synergistic effect on soil nitrogen transformation.

  18. Efficient Management of Nitrogen Fertilizers for Flooded Rice in Relation to Nitrogen Transformations in Flooded Soils

    Institute of Scientific and Technical Information of China (English)

    ZHUZHAO-LIANG

    1992-01-01

    Recent progresses in efficient management of nitrogen fertilizers for flooded rice in relation to nitrogen transformations in flooded soil were reviewed.Considerable progress has been achieved in the investigation on the mechanism of ammonia loss and the factors affecting it .However,little progress has been obtained in the investigations on nitrification-denitrification loss owing to the lack of method for estimating the fluxes of gaseous N products.Thus,so far the management practices developed or under investigation primarily for reducing ammonia loss are feasible or promising,while those for reducing nitrification-denitrification loss seem obscure,except the point deep placement. In addition,it was emphasized that the prediction of soil N supply and the recommendation of the optimal rate of N application based on it are only semi-quantitative.The priorities in research for improving the prediction are indicated.

  19. Dissolved organic nitrogen transformation in river water: Effects of suspended sediment and organic nitrogen concentration

    Science.gov (United States)

    Xia, Xinghui; Liu, Ting; Yang, Zhifeng; Zhang, Xueqing; Yu, Zhongbo

    2013-03-01

    SummaryHigh suspended sediment (SPS) concentration exists in many Asian rivers. In addition, human activities and climate change can change river runoff, leading to the variation of SPS and pollutant concentrations. In this research, the effects of SPS and dissolved organic nitrogen (DON) concentration on DON transformation in river systems were studied through simulation experiments with samples collected from the Yellow River which is famous for its high SPS concentration. The results indicated that high DON concentration resulted in a longer retention time of NH4+-N and NO2--N in the system due to the inhibition effect of ammonia on nitrification. The re-suspension of sediment accelerated DON transformation, and both the ammonification and nitrification rates increased with SPS concentration. The ammonification rate constants obtained from the first-order kinetics were 0.286, 0.332, 0.538 day-1; the nitrification rate constants obtained from the Logistic model were 0.0018, 0.0038, 0.005 day-1 μmol-1 L-1 for the systems with SPS concentration of 0, 5, 10 g L-1, respectively. Bacteria tended to attach onto SPS, and the specific growth rate in the systems with SPS was approximately two orders of magnitude higher than that without SPS in the first 3 days of cultivation, which resulted in an increase of DON transformation rate with SPS concentration. This study implied that DON transformation rate may be lower in the dry season than that in the wet season, and nitrogen transformation will be affected by the variation of river runoff and SPS concentration.

  20. Patterns and controls on nitrogen cycling of biological soil crusts

    Science.gov (United States)

    Barger, Nichole N.; Zaady, Eli; Weber, Bettina; Garcia-Pichel, Ferran; Belnap, Jayne

    2016-01-01

    Biocrusts play a significant role in the nitrogen [N ] cycle within arid and semi-arid ecosystems, as they contribute major N inputs via biological fixation and dust capture, harbor internal N transformation processes, and direct N losses via N dissolved, gaseous and erosional loss processes (Fig. 1). Because soil N availability in arid and semi-arid ecosystems is generally low and may limit net primary production (NPP), especially during periods when adequate water is available, understanding the mechanisms and controls of N input and loss pathways in biocrusts is critically important to our broader understanding of N cycling in dryland environments. In particular, N cycling by biocrusts likely regulates short-term soil N availability to support vascular plant growth, as well as long-term N accumulation and maintenance of soil fertility. In this chapter, we review the influence of biocrust nutrient input, internal cycling, and loss pathways across a range of biomes. We examine linkages between N fixation capabilities of biocrust organisms and spatio-temporal patterns of soil N availability that may influence the longer-term productivity of dryland ecosystems. Lastly, biocrust influence on N loss pathways such as N gas loss, leakage of N compounds from biocrusts, and transfer in wind and water erosion are important to understand the maintenance of dryland soil fertility over longer time scales. Although great strides have been made in understanding the influence of biocrusts on ecosystem N cycling, there are important knowledge gaps in our understanding of the influence of biocrusts on ecosystem N cycling that should be the focus of future studies. Because work on the interaction of N cycling and biocrusts was reviewed in Belnap and Lange (2003), this chapter will focus primarily on research findings that have emerged over the last 15 years (2000-2015).

  1. Nitrogen transformation in alpine soils of the Northern Caucasus: effect of nitrogen source and low temperatures

    Science.gov (United States)

    Makarov, Mikhail; Ermak, Anton; Malysheva, Tatiana; Mulyukova, Olga

    2010-05-01

    different temperatures between +15 °C and -10 °C in presence of 15N labeled ammonium and glycine. The results indicated that low temperatures and drying-rewetting effected to N transformation by mobilization of additional element from soil organic matter, which became available for the following microbial immobilization. Results of our experiments can help with understanding of possible changes in a cycle of nitrogen which can occur in alpine ecosystems as a result of climatic changes in high-mountain regions.

  2. Measurement of nitrogen content in a gas mixture by transforming the nitrogen into a substance detectable with nondispersive infrared detection

    Science.gov (United States)

    Owen, Thomas E.; Miller, Michael A.

    2007-03-13

    A method of determining the amount of nitrogen in a gas mixture. The constituent gases of the mixture are dissociated and transformed to create a substance that may measured using nondispersive infrared adsorption techniques.

  3. Influence of trace metals on some soil nitrogen transformations

    Energy Technology Data Exchange (ETDEWEB)

    Chang, F.H.; Broadbent, F.E.

    An investigation to evaluate the influence of trace metals on N immobilization, N mineralization, and nitrification was conducted. Samples of Yolo silt loam amended with 100 ppm NH/sub 4/-N, 1% sewage sludge, and 1% ground alfalfa (Medicago sativa L.) were treated with solutions to provide 100, 200, and 400 ppm of Cd(II), Cr(III), Cu(II), Mn(II), Pb(II) and Zn(II), and incubated for 2, 4, 8, and 12-week periods. Metals were determined by extracting with water, KNO/sub 3/, DPTA (diethylenetriaminepentaacetic acid), and HNO/sub 3/ at the end of each incubation period. All metals reverted quickly to more insoluble forms. Quantities of metals extractable with water + KNO, + DPTA decreased with time, while corresponding increases in HNO/sub 3/-soluble forms occurred. Nitrogen immobilization was measured during 2- to 4-week period, and N mineralization and nitrification during the 4- to 12-week period. At low levels of metal addition Mn and Pb stimulated N transformations. Among the six metals studied the sequence in order of decreasing inhibition was Cr > Cd > Cu > Zn > Mn > Pb. It was concluded that N transformation rates may be affected by trace metals in soils receiving heavy sludge applications.

  4. Benchmarking Combined Biological Phosphorus and Nitrogen Removal Wastewater Treatment Processes

    DEFF Research Database (Denmark)

    Gernaey, Krist; Jørgensen, Sten Bay

    2004-01-01

    This paper describes the implementation of a simulation benchmark for studying the influence of control strategy implementations on combined nitrogen and phosphorus removal processes in a biological wastewater treatment plant. The presented simulation benchmark plant and its performance criteria...... are to a large extent based on the already existing nitrogen removal simulation benchmark. The paper illustrates and motivates the selection of the treatment plant lay-out, the selection of the biological process model, the development of realistic influent disturbance scenarios for dry, rain and storm weather...... conditions respectively, the definition of performance indexes that include the phosphorus removal processes, and the selection of a suitable operating point for the plant. Two control loops were implemented: one for dissolved oxygen control using the oxygen transfer coefficient K(L)a as manipulated variable...

  5. Biological Nitrogen Fixation In Tropical Dry Forests Of Costa Rica

    Science.gov (United States)

    Gei, M. G.; Powers, J. S.

    2012-12-01

    Evidence suggests that tropical dry forests (TDF) are not nitrogen (N) deficient. This evidence includes: high losses of gaseous nitrogen during the rainy season, high ecosystem soil N stocks and high N concentrations in leaves and litterfall. Its been commonly hypothesized that biological nitrogen fixation is responsible for the high availability of N in tropical soils. However, the magnitude of this flux has rarely if ever been measured in tropical dry forests. Because of the high cost of fixing N and the ubiquity of N fixing legume trees in the TDF, at the individual tree level symbiotic fixation should be a strategy down-regulated by the plant. Our main goal was to determine the rates of and controls over symbiotic N fixation. We hypothesized that legume tree species employ a facultative strategy of nitrogen fixation and that this process responds to changes in light availability, soil moisture and nutrient supply. We tested this hypothesis both on naturally established trees in a forest and under controlled conditions in a shade house by estimating the quantities of N fixed annually using the 15N natural abundance method, counting nodules, and quantifying (field) or manipulating (shade house) the variation in important environmental variables (soil nutrients, soil moisture, and light). We found that in both in our shade house experiment and in the forest, nodulation varied among different legume species. For both settings, the 15N natural abundance approach successfully detected differences in nitrogen fixation among species. The legume species that we studied were able to regulate fixation depending on the environmental conditions. They showed to have different strategies of nitrogen fixation that follow a gradient of facultative to obligate fixation. Our data suggest that there exists a continuum of nitrogen fixation strategies among species. Any efforts to define tropical legume trees as a functional group need to incorporate this variation.

  6. Biological phosphorus and nitrogen removal in a single sludge system

    Energy Technology Data Exchange (ETDEWEB)

    Carlsson, Hans

    1996-05-01

    The primary aim of this thesis was to investigate the process stability of a single sludge activated system designed for the combined operation of enhanced biological phosphorus removal (EBPR) and nitrogen removal. A pilot plant at the Sjoelunda wastewater treatment plant in Malmoe, Sweden, has formed the basis for the investigation. The pilot plant study showed that the concentration of total phosphorus on average was low in the effluent, below 0.5 mg P/l. Simultaneously with the highest concentrations of phosphorus in the effluent, the lowest COD/P ratios in the effluent were recorded. A recurrent pattern of high concentrations of phosphorus was observed every year in July, which is the industrial holiday month in Sweden. Other instances of increased phosphorus concentrations in the secondary effluent illustrate the effect of prolonged periods of rain. Increasing flow rates due to rain lead to a dilution and a change in the composition of the COD in the influent wastewater. The COD/P and VFA/P ratios decrease with decreasing concentrations of COD. It was also shown that high removal ratios of both nitrogen and phosphorus during long periods are possible. The nitrogen removal was stable during the whole investigated period, whereas the phosphorus removal was unstable during prolonged periods with low concentrations of COD in the influent water. The combined biological phosphorus and nitrogen removal process implies that during these periods the risk of recirculating nitrate to the anaerobic reactor increases. Such a recirculation both stabilizes the nitrogen removal and withdraws some of the readily degradable organic material from the bio-P bacteria. The main conclusion of this study is that a phosphorus limited EBPR process can cope with the day to day variations, but occasionally, measures have to be taken if the demands for phosphorus removal are stringent. 49 refs, 8 figs, 1 tab

  7. Biological Nitrogen Fixation in Two Tropical Forests: Ecosystem-Level Patterns and Effects of Nitrogen Fertilization

    OpenAIRE

    Cusack, Daniela F.; Silver, Whendee; McDowell, William H.

    2009-01-01

    Humid tropical forests are often characterized by large nitrogen (N) pools, and are known to have large potential N losses. Although rarely measured, tropical forests likely maintain considerable biological N fixation (BNF) to balance N losses. We estimated inputs of N via BNF by free-living microbes for two tropical forests in Puerto Rico, and assessed the response to increased N availability using an on-going N fertilization experiment. Nitrogenase activity was measured across forest strata...

  8. Transformation of the Nitrogen Cycle. Recent Trends, Questions, and Potential Solutions

    Energy Technology Data Exchange (ETDEWEB)

    Galloway, J.N. [Environmental Sciences Department, University of Virginia, Charlottesville, VA 22904 (United States); Townsend, A.R. [Institute of Arctic and Alpine Research and Department of Ecology and Evolutionary Biology, Campus Box 450, University of Colorado, Boulder, CO 80309 (United States); Erisman, J.W. [ECN Biomass, Coal and Environmental Research, Petten (Netherlands); Bekunda, M. [Faculty of Agriculture, Makerere University, Post Office Box 7062, Kampala (Uganda); Cai, Z. [Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008 (China); Freney, J.R. [Commonwealth Scientific and Industrial Research Organisation Plant Industry, GPO Box 1600, Canberra, (Australia); Martinelli, L.A. [Centro de Energia Nuclear na Agricultura-Universidade de Sao Paulo, Avenida Centenario, 303, Piracicaba-SP (Brazil); Seitzinger, S.P. [Rutgers, The State University of New Jersey, Institute of Marine and Coastal Sciences, Rutgers/National Oceanic and Atmospheric Administration Cooperative Marine Education and Research Program, New Brunswick, NJ 08901 (United States); Sutton, M. [Centre for Ecology and Hydrology, Edinburgh Research Station, Bush Estate, Penicuik, Midlothian, EH26 0QB (United Kingdom)

    2008-08-15

    Humans continue to transform the global nitrogen cycle at a record pace, reflecting an increased combustion of fossil fuels, growing demand for nitrogen in agriculture and industry, and pervasive inefficiencies in its use. Much anthropogenic nitrogen is lost to air, water, and land to cause a cascade of environmental and human health problems. Simultaneously, food production in some parts of the world is nitrogen-deficient, highlighting inequities in the distribution of nitrogen containing fertilizers. Optimizing the need for a key human resource while minimizing its negative consequences requires an integrated interdisciplinary approach and the development of strategies to decrease nitrogen-containing waste.

  9. [Effects of nitrogen regulators on fertilizer nitrogen transformation in meadow cinnamon soil and on pakchoi growth].

    Science.gov (United States)

    Sun, Zhi-Mei; Zhang, Kuo; Liu, Jian-Tao; Si, Huan-Sen; Wang, Yan-Qun

    2012-09-01

    Soil incubation test and pot experiment were conducted to investigate the effects of dicyandiamide (DCD) and its combination with nano-carbon on the transformation of fertilizers (urea and ammonium bicarbonate) nitrogen (N) in meadow cinnamon soil, a typical soil type in North China Plain, and on the growth of pakchoi (Brassica chinensis). In the first two weeks after applying urea and ammonium bicarbonate, the soil NH4+-N and NO3(-)-N contents varied greatly, but little variation was observed since then. The effects of the applied fertilizer N on the pakchoi growth and its N use efficiency differed significantly at early growth stages, but had little difference at harvesting stage. The DCD inhibited the transformation of the fertilizer N (especially ammonium bicarbonate N) into nitrate markedly, and this effect increased with increasing DCD dose. Under the conditions of our experiment, the optimal application rate of DCD was 1.0-1.5% of applied fertilize N, which could increase the pakchoi yield significantly, improve the leaf color, decrease the plant nitrate contents, and increase the fertilizer N use efficiency. The combination of DCD and nano-carbon exerted a synergistic effect on inhibiting soil ammonium oxidation, and also, promoted the pakchoi growth and N utilization at early growth stages significantly and decreased the plant nitrate level at harvesting stage.

  10. Sources and transformations of anthropogenic nitrogen along an urban river-estuarine continuum

    Science.gov (United States)

    Pennino, Michael J.; Kaushal, Sujay S.; Murthy, Sudhir N.; Blomquist, Joel D.; Cornwell, Jeff C.; Harris, Lora A.

    2016-11-01

    Urbanization has altered the fate and transport of anthropogenic nitrogen (N) in rivers and estuaries globally. This study evaluates the capacity of an urbanizing river-estuarine continuum to transform N inputs from the world's largest advanced (e.g., phosphorus and biological N removal) wastewater treatment facility. Effluent samples and surface water were collected monthly along the Potomac River estuary from Washington D.C. to the Chesapeake Bay over a distance of 150 km. In conjunction with box model mass balances, nitrate stable isotopes and mixing models were used to trace the fate of urban wastewater nitrate. Nitrate concentrations and δ15N-NO3- values were higher down-estuary from the Blue Plains wastewater outfall in Washington D.C. (2.25 ± 0.62 mg L-1 and 25.7 ± 2.9 ‰, respectively) compared to upper-estuary concentrations (1.0 ± 0.2 mg L-1 and 9.3 ± 1.4 ‰, respectively). Nitrate concentration then decreased rapidly within 30 km down-estuary (to 0.8 ± 0.2 mg L-1), corresponding to an increase in organic nitrogen and dissolved organic carbon, suggesting biotic uptake and organic transformation. TN loads declined down-estuary (from an annual average of 48 000 ± 5000 kg day-1 at the sewage treatment plant outfall to 23 000 ± 13 000 kg day-1 at the estuary mouth), with the greatest percentage decrease during summer and fall. Annually, there was a 70 ± 31 % loss in wastewater NO3- along the estuary, and 28 ± 6 % of urban wastewater TN inputs were exported to the Chesapeake Bay, with the greatest contribution of wastewater TN loads during the spring. Our results suggest that biological transformations along the urban river-estuary continuum can significantly transform wastewater N inputs from major cities globally, and more work is necessary to evaluate the potential of organic nitrogen and carbon to contribute to eutrophication and hypoxia.

  11. Primary energy-transformations in biological systems

    Energy Technology Data Exchange (ETDEWEB)

    Lehninger, A.L.

    1980-10-01

    In this paper I shall review the main outlines of current research on the molecular aspects of the primary energy-coupling mechanisms in cells, those carried out by energy-transducing membranes. They include the capture of solar energy by the chloroplast membranes of green plants, used to generate carbohydrates and molecular oxygen from carbon dioxide and water, and the counterpart of photosynthesis, the process of respiration in heterotrophic organisms, in which reduced organic products generated by photosynthesis are oxidized at the expense of dioxygen to form carbon dioxide and water. Although the cycling of dioxygen, carbon dioxide, and organic matter between the plant and animal worlds is well known, it is not generally appreciated that the magnitude of biological energy flux in these cycles is huge compared to the total energy flux in man-made devices. A major consequence is that the concentration of carbon dioxide in the atmosphere has been increasing at a significant rate, at a time when there is also a decrease, at least in some parts of the world, in the counterbalancing utilization of CO/sub 2/ by green plants, due to deforestation. The greenhouse effect of increased atmospheric CO/sub 2/ may not only change the earth's climate, but also may influence the rate of photosynthesis. It is also not generally appreciated that energy flow in the biosphere leads to production of enormous amounts of organic matter potentially useful in furnishing man's energy requirements.

  12. Biological nitrogen fixation is not a major contributor to the nitrogen demand of a commercially growth South African sugarcane cultivar

    NARCIS (Netherlands)

    Hoefsloot, G.; Termorshuizen, A.J.; Watt, D.A.; Cramer, M.D.

    2005-01-01

    It has previously been reported that endophytic diazotrophic bacteria contribute significantly to the nitrogen budgets of some graminaceous species. In this study the contribution of biological nitrogen fixation to the N-budget of a South African sugarcane cultivar was evaluated using 15N natural ab

  13. Advanced low carbon-to-nitrogen ratio wastewater treatment by electrochemical and biological coupling process.

    Science.gov (United States)

    Deng, Shihai; Li, Desheng; Yang, Xue; Zhu, Shanbin; Xing, Wei

    2016-03-01

    Nitrogen pollution in ground and surface water significantly affects the environment and its organisms, thereby leading to an increasingly serious environmental problem. Such pollution is difficult to degrade because of the lack of carbon sources. Therefore, an electrochemical and biological coupling process (EBCP) was developed with a composite catalytic biological carrier (CCBC) and applied in a pilot-scale cylindrical reactor to treat wastewater with a carbon-to-nitrogen (C/N) ratio of 2. The startup process, coupling principle, and dynamic feature of the EBCP were examined along with the effects of hydraulic retention time (HRT), dissolved oxygen (DO), and initial pH on nitrogen removal. A stable coupling system was obtained after 51 days when plenty of biofilms were cultivated on the CCBC without inoculation sludge. Autotrophic denitrification, with [Fe(2+)] and [H] produced by iron-carbon galvanic cells in CCBC as electron donors, was confirmed by equity calculation of CODCr and nitrogen removal. Nitrogen removal efficiency was significantly influenced by HRT, DO, and initial pH with optimal values of 3.5 h, 3.5 ± 0.1 mg L(-1), and 7.5 ± 0.1, respectively. The ammonia, nitrate, and total nitrogen (TN) removal efficiencies of 90.1 to 95.3 %, 90.5 to 99.0 %, and 90.3 to 96.5 % were maintained with corresponding initial concentrations of 40 ± 2 mg L(-1) (NH3-N load of 0.27 ± 0.01 kg NH3-N m(-3) d(-1)), 20 ± 1 mg L(-1), and 60 ± 2 mg L(-1) (TN load of 0.41 ± 0.02 kg TN m(-3) d(-1)). Based on the Eckenfelder model, the kinetics equation of the nitrogen transformation along the reactor was N e  = N 0 exp (-0.04368 h/L(1.8438)). Hence, EBCP is a viable method for advanced low C/N ratio wastewater treatment.

  14. Cross-system comparisons of soil nitrogen transformations and nitrous oxide flux in tropical forest ecosystems

    Science.gov (United States)

    Matson, Pamela A.; Vitousek, Peter M.

    1987-01-01

    Soil nitrogen transformations and nitrous oxide flux across the soil-air interface have been measured in a variety of tropical forest sites and correlated with patterns of nitrogen circulation. Nitrogen mineralizaton and nitrification potentials were found to be high in the relatively fertile Costa Rica sites and the Amazonian oxisol/ultisols, intermediate in Amazonian white sand soils, and low in the Hawaiian montane sites. Nitrous oxide fluxes ranged from 0 to 6.2 ng/sq cm per h, and the mean flux per site was shown to be highly correlated with mean nitrogen mineralization.

  15. Transformation of nitrogen compounds in the tundra soils of Northern Fennoscandia

    Science.gov (United States)

    Maslov, M. N.; Makarov, M. I.

    2016-07-01

    The transformation of organic nitrogen compounds in the soils of tundra ecosystems of Northern Fennoscandia has been studied under laboratory and natural conditions. Tundra soils contain significant reserves of total nitrogen, but they are poor in its extractable mineral and organic forms. The potential rates of the net mineralization and net immobilization of nitrogen by microorganisms vary among the soils and depend on the C: N ratio in the extractable organic matter and microbial biomass of soil. Under natural conditions, the rate of nitrogen net mineralization is lower than the potential rate determined under laboratory conditions by 6-25 times. The incubation of tundra soils in the presence of plants does not result in the accumulation of mineral nitrogen compounds either in the soil or in microbial biomass. This confirms the high competitive capacity of plants under conditions of limited nitrogen availability in tundra ecosystems.

  16. Can we trust current estimates for biological nitrogen fixation?

    Science.gov (United States)

    Bellenger, Jean-Philippe; Kraepiel, Anne

    2016-04-01

    Biological nitrogen fixation (BNF) consists on the reduction of atmospheric dinitrogen (N2) into bioavailable ammonium. This reaction accounts for up to 97% of nitrogen (N) input in unmanaged terrestrial ecosystems. Closing the N budget is a long standing challenge in many ecosystems. Recent studies have highlighted that current methods used to assess BNF are affected by critical biases. These findings challenge our confidence in many N budgets and call for a profound reconsideration of our methodological approaches. Beside these methodological issues, our ability to properly assess BNF might be further altered as a result of a misconception regarding the importance of BNF enzymatic diversity in nature. BNF is catalyzed by the enzyme nitrogenase (Nase) for which three isoforms have been identified so far; the molybdenum (Mo), vanadium (V) and iron-only (Fe) isoforms. Currently BNF is mostly considered to primarily depend on the Mo isoform. The contribution of the alternative Nases (V and Fe isoforms) to BNF in natural habitats has been mostly overlooked. However, recent findings have challenged this traditional view of the Nases hierarchy (Mo isoform predominance) with deep implications for BNF assessment in the field. Here, I will present an overview of recent findings, provided by various research groups, challenging current methods used to assess BNF. I will also present a summary of recent studies highlighting the importance of alternative Nases in nature. I will finally illustrate how altering our view on the Mo-Nase predominance can deeply affect our confidence in current BNF estimates. I will conclude by presenting new methodological approaches that will contribute to significantly improve our ability to understand and estimate BNF in the field by improving our capacity to access BNF spatio-temporal variability and enzymatic diversity.

  17. Characterizing the transformation and transfer of nitrogen during the aerobic treatment of organic wastes and digestates

    Energy Technology Data Exchange (ETDEWEB)

    Zeng Yang, E-mail: yang.zeng@irstea.fr [Irstea, UR GERE, 17 avenue de Cucille, CS 64427, F-35044 Rennes Cedex (France); Universite Europeenne de Bretagne, F-35000 Rennes (France); Guardia, Amaury de; Daumoin, Mylene; Benoist, Jean-Claude [Irstea, UR GERE, 17 avenue de Cucille, CS 64427, F-35044 Rennes Cedex (France)

    2012-12-15

    Highlights: Black-Right-Pointing-Pointer Ammonia emissions varied depending on the nature of wastes and the treatment conditions. Black-Right-Pointing-Pointer Nitrogen losses resulted from ammonia emissions and nitrification-denitrification. Black-Right-Pointing-Pointer Ammonification can be estimated from biodegradable carbon and carbon/nitrogen ratio. Black-Right-Pointing-Pointer Ammonification was the main process contributing to N losses. Black-Right-Pointing-Pointer Nitrification rate was negatively correlated to stripping rate of ammonia nitrogen. - Abstract: The transformation and transfer of nitrogen during the aerobic treatment of seven wastes were studied in ventilated air-tight 10-L reactors at 35 Degree-Sign C. Studied wastes included distinct types of organic wastes and their digestates. Ammonia emissions varied depending on the kind of waste and treatment conditions. These emissions accounted for 2-43% of the initial nitrogen. Total nitrogen losses, which resulted mainly from ammonia emissions and nitrification-denitrification, accounted for 1-76% of the initial nitrogen. Ammonification was the main process responsible for nitrogen losses. An equation which allows estimating the ammonification flow of each type of waste according to its biodegradable carbon and carbon/nitrogen ratio was proposed. As a consequence of the lower contribution of storage and leachate rates, stripping and nitrification rates of ammonia nitrogen were negatively correlated. This observation suggests the possibility of promotingnitrification in order to reduce ammonia emissions.

  18. Prochlorococcus Genetic Transformation and the Genomics of Nitrogen Metabolism

    Science.gov (United States)

    2005-09-01

    ecologically important microbe. REFERENCES Bandrin, SV, Rabinovich, PM, Stepanov, Al. (1983). "Three linkage groups of genes involved in riboflavin ...dotted line). Genes In acquisition and rearrangement of nitrogen usage genes. In M1T9313, 25 genes including different functional categories are colour ...1983). "Three linkage groups of genes involved in riboflavin biosynthesis in E. co/i." Genetika (Sov. Genet.) 19: 1419-1425. Brahamsha, B. (1996). "A

  19. Microbial transformations of nitrogen, sulfur and iron dictate vegetation composition in wetlands: a review

    Directory of Open Access Journals (Sweden)

    Leon P.M. Lamers

    2012-04-01

    Full Text Available The majority of studies on rhizospheric interactions between microbial communities and vegetation focus on pathogens, mycorrhizal symbiosis, and/or carbon transformations. Although the biogeochemical transformations of nitrogen (N, sulfur (S and iron (Fe have profound effects on plants, these effects have received far less attention. Firstly, all three elements are plant nutrients, and microbial activity significantly changes their mobility and availability. Secondly, microbial oxidation with oxygen supplied by radial oxygen loss (ROL from roots in wetlands causes acidification, while reduction using alternative electron acceptors leads to generation of alkalinity, affecting pH in the rhizosphere and hence plant composition. Thirdly, reduced species of all three elements may become phytotoxic. In addition, Fe cycling is tightly linked to that of S and phosphorus (P. As water level fluctuations are very common in wetlands, rapid changes in the availability of oxygen and alternative terminal electron acceptors will result in strong changes in the prevalent microbial redox reactions, with significant effects on plant growth. Depending on geological and hydrological settings, these interacting microbial transformations change the conditions and resource availability for plants, which are strong drivers of vegetation development and composition by changing relative competitive strengths. Conversely, microbial composition is strongly driven by vegetation composition. Therefore, the combination of micro- and macroecological knowledge is essential to understand the biogeochemical and biological key factors driving heterogeneity and total (i.e., micro-macro community composition at different spatial and temporal scales. As N and S inputs have drastically increased due to anthropogenic forcing and Fe inputs have decreased at a global scale, this combined approach has become even more urgent.

  20. Preparation and biological evaluation of hydroxyapatite-coated nickel-free high-nitrogen stainless steel

    Directory of Open Access Journals (Sweden)

    Makoto Sasaki, Motoki Inoue, Yasuyuki Katada, Yuuki Nishida, Akiyoshi Taniguchi, Sachiko Hiromoto and Tetsushi Taguchi

    2012-01-01

    Full Text Available Calcium phosphate was formed on nickel-free high-nitrogen stainless steel (HNS by chemical solution deposition. The calcium phosphate deposition was enhanced by glutamic acid covalently immobilized on the surface of HNS with trisuccinimidyl citrate as a linker. X-ray diffraction patterns and Fourier transform infrared spectra showed that the material deposited on glutamic acid-immobilized HNS within 24 h was low-crystallinity calcium-deficient carbonate-containing hydroxyapatite (HAp. The biological activity of the resulting HAp-coated HNS was investigated by using a human osteoblast-like MG-63 cell culture. The HAp-coated HNS stimulated the alkaline-phosphate activity of the MG-63 culture after 7 days. Therefore, HAp-coated HNS is suitable for orthopedic devices and soft tissue adhesion materials.

  1. Influence of natural zeolite and nitrification inhibitor on organics degradation and nitrogen transformation during sludge composting.

    Science.gov (United States)

    Zhang, Junya; Sui, Qianwen; Li, Kun; Chen, Meixue; Tong, Juan; Qi, Lu; Wei, Yuansong

    2016-01-01

    Sludge composting is one of the most widely used treatments for sewage sludge resource utilization. Natural zeolite and nitrification inhibitor (NI) are widely used during composting and land application for nitrogen conservation, respectively. Three composting reactors (A--the control, B--natural zeolite addition, and C--3,4-dimethylpyrazole phosphate (DMPP) addition) were established to investigate the influence of NI and natural zeolite addition on organics degradation and nitrogen transformation during sludge composting conducted at the lab scale. The results showed that, in comparison with the control, natural zeolite addition accelerated organics degradation and the maturity of sludge compost was higher, while the DMPP addition slowed down the degradation of organic matters. Meanwhile, the nitrogen transformation functional genes including those responses for nitrification (amoA and nxrA) and denitrification (narG, nirS, nirK, and nosZ) were quantified through quantitative PCR (qPCR) to investigate the effects of natural zeolites and DMPP addition on nitrogen transformation. Although no significant difference in the abundance of nitrogen transformation functional genes was observed between treatments, addition of both natural zeolite and DMPP increases the final total nitrogen content by 48.6% and 23.1%, respectively. The ability of natural zeolite for nitrogen conservation was due to the absorption of NH3 by compost, and nitrogen conservation by DMPP was achieved by the source reduction of denitrification. Besides, it was assumed that the addition of natural zeolite and DMPP may affect the activity of these genes instead of the abundance.

  2. Microbial transformations of nitrogen, sulfur, and iron dictate vegetation composition in wetlands: A review

    OpenAIRE

    Leon P.M. Lamers; van Diggelen, Josepha M. H.; Op Den Camp, Huub J M; Visser, Eric J. W.; Lucassen, Esther C. H. E. T.; Vile, Melanie A.; Jetten, Mike S. M.; Smolders, Alfons J. P.; Roelofs, Jan G. M.

    2012-01-01

    The majority of studies on rhizospheric interactions between microbial communities and vegetation focus on pathogens, mycorrhizal symbiosis, and/or carbon transformations. Although the biogeochemical transformations of nitrogen (N), sulfur (S) and iron (Fe) have profound effects on plants, these effects have received far less attention. Firstly, all three elements are plant nutrients, and microbial activity significantly changes their mobility and availability. Secondly, microbial oxidation w...

  3. Variability for Biological Nitrogen Fixation Capacity in Beans

    Science.gov (United States)

    As legumes, common beans have the capacity to form a symbiotic relationship with soil bacteria called rhizobia and fix nitrogen from the atmosphere. Common beans however are considered to be poor nitrogen fixers as compared to other legumes. Identification of genetic variability for N fixation capac...

  4. Effect of orchard age on soil nitrogen transformation in subtropical China and implications.

    Science.gov (United States)

    Zhang, Yushu; Zhang, Jinbo; Zhu, Tongbin; Müller, Christoph; Cai, Zucong

    2015-08-01

    A better understanding of nitrogen transformation in soils could reveal the capacity for biological inorganic N supply and improve the efficiency of N fertilizers. In this study, a (15)N tracing study was carried out to investigate the effects of converting woodland to orchard, and orchard age on the gross rates of N transformation occurring simultaneously in subtropical soils in Eastern China. The results showed that inorganic N supply rate was remained constant with soil organic C and N contents increased after converting woodland into citrus orchard and with increasing orchard age. This phenomenon was most probably due to the increase in the turnover time of recalcitrant organic-N, which increased with decreasing soil pH along with increasing orchard age significantly. The amoA gene copy numbers of both archaeal and bacterial were stimulated by orchard planting and increased with increasing orchard age. The nitrification capacity (defined as the ratio of gross rate of nitrification to total gross rate of mineralization) increased following the Michaelis-Menten equation, sharply in the first 10 years after woodland conversion to orchard, and increased continuously but much more slowly till 30 years. Due to the increase in nitrification capacity and unchanged NO3(-) consumption, the dominance of ammonium in inorganic N in woodland soil was shifted to nitrate dominance in orchard soils. These results indicated that the risk of NO3(-) loss was expected to increase and the amount of N needed from fertilizers for fruit growth did not change although soil organic N accumulated with orchard age.

  5. An Untargeted Metabolomics Survey from a Perturbation Model of Nitrogen Transformation in a Tropical Wastewater Community

    DEFF Research Database (Denmark)

    Kirkegaard, Rasmus Hansen; Angel Cokro, Anisa; Umashankar, Shivshankar;

    In order to understand metabolic changes occurring during nitrogen transformation in a complex wastewater community, we conducted a metabolome time series study on a volume of freshly sourced, anoxic activated sludge, studying metabolic changes associated with the transition from anoxic to aerobi...

  6. Bacterial community structure and nitrogen transformation in hyporheic zones of arid-land streams

    Science.gov (United States)

    Zeglin, L. H.; Crenshaw, C. L.; Dahm, C. N.; Takacs-Vesbach, C.

    2007-12-01

    Hyporheic zones of desert streams can be areas of high biological activity and consequent nutrient transformation, particularly where land use change increases nutrient concentrations in a stream. Does hyporheic bacterial community composition vary, and does this biotic heterogeneity covary with water and nutrient supply? Bromide (Br-) and 15N-NO3- was injected for 24 hr in six streams (three "natural" reference streams, three streams in agricultural/urbanized catchments) in New Mexico and Arizona, USA. Four transects of 3 to 4 wells were placed along a longitudinal gradient within the study reach, and from these hyporheic water and gas samples were collected during and after each experiment. Gas samples were analyzed for O2, 15N2O, and 15N2. Hyporheic water samples were analyzed for major cations and anions, DOC, 15NO3- and 15NH4+. Bacterial diversity of hyporheic water was assessed using Denaturing Gradient Gel Electrophoresis (DGGE). There was high spatial and temporal variability in hyporheic bacterial community structure, connection with surface water and nutrient concentrations both within and among streams. For example, mean subsurface DGGE band richness per stream ranged from 9 to 21, and surface water comprised between 0 to 100 percent of hyporheic water in each well. There were strong differences in bacterial richness between streams (ANOVA, p nutrient concentration. 15NH4+ levels were higher in modified stream than reference stream subsurface waters, suggesting dissimilatory nitrate reduction to ammonium (DNRA) may be an important process in these hyporheic sediments. Our results to date suggest that though hyporheic microbial community structure is highly heterogeneous, this biological variability may be due to different factors than variability in stream nitrogen cycling function. Further work will identify dominant sequences within these bacterial communities and investigate within-stream heterogeneity.

  7. Biological nitrogen fixation by lucerne (Medicago sativa L.) in acid soils.

    NARCIS (Netherlands)

    Pijnenborg, J.W.M.

    1990-01-01

    Growth of lucerne( Medicago sativa L.) is poor in soils with values of pH-H2O below 6. This is often due to nitrogen deficiency, resulting from a hampered performance of the symbiosis withRhizobium meliloti. This thesis deals with the factors affecting biological nitrogen fixat

  8. Robust biological nitrogen fixation in a model grass-bacterial association.

    Science.gov (United States)

    Pankievicz, Vânia C S; do Amaral, Fernanda P; Santos, Karina F D N; Agtuca, Beverly; Xu, Youwen; Schueller, Michael J; Arisi, Ana Carolina M; Steffens, Maria B R; de Souza, Emanuel M; Pedrosa, Fábio O; Stacey, Gary; Ferrieri, Richard A

    2015-03-01

    Nitrogen-fixing rhizobacteria can promote plant growth; however, it is controversial whether biological nitrogen fixation (BNF) from associative interaction contributes to growth promotion. The roots of Setaria viridis, a model C4 grass, were effectively colonized by bacterial inoculants resulting in a significant enhancement of growth. Nitrogen-13 tracer studies provided direct evidence for tracer uptake by the host plant and incorporation into protein. Indeed, plants showed robust growth under nitrogen-limiting conditions when inoculated with an ammonium-excreting strain of Azospirillum brasilense. (11)C-labeling experiments showed that patterns in central carbon metabolism and resource allocation exhibited by nitrogen-starved plants were largely reversed by bacterial inoculation, such that they resembled plants grown under nitrogen-sufficient conditions. Adoption of S. viridis as a model should promote research into the mechanisms of associative nitrogen fixation with the ultimate goal of greater adoption of BNF for sustainable crop production.

  9. Influence of carbohydrate addition on nitrogen transformations and greenhouse gas emissions of intensive aquaculture system.

    Science.gov (United States)

    Hu, Zhen; Lee, Jae Woo; Chandran, Kartik; Kim, Sungpyo; Sharma, Keshab; Khanal, Samir Kumar

    2014-02-01

    Aquaculture is one of the fastest-growing segments of the food economy in modern times. It is also being considered as an important source of greenhouse gas (GHG) emissions. To date, limited studies have been conducted on GHG emissions from aquaculture system. In this study, daily addition of fish feed and soluble starch at a carbon-to-nitrogen (C/N) ratio of 16:1 (w/w) was used to examine the effects of carbohydrate addition on nitrogen transformations and GHG emissions in a zero-water exchange intensive aquaculture system. The addition of soluble starch stimulated heterotrophic bacterial growth and denitrification, which led to lower total ammonia nitrogen, nitrite and nitrate concentrations in aqueous phase. About 76.2% of the nitrogen output was emitted in the form of gaseous nitrogen (i.e., N2 and N2O) in the treatment tank (i.e., aquaculture tank with soluble starch addition), while gaseous nitrogen accounted for 33.3% of the nitrogen output in the control tank (i.e., aquaculture tank without soluble starch addition). Although soluble starch addition reduced daily N2O emissions by 83.4%, it resulted in an increase of daily carbon dioxide (CO2) emissions by 91.1%. Overall, starch addition did not contribute to controlling the GHG emissions from the aquaculture system.

  10. Integrated numerical model of nitrogen transportation, absorption and transformation by two-dimension in soil-crop system

    Institute of Scientific and Technical Information of China (English)

    WANG Hong-qi; SHU Yan; QI Yong-qiang; ZHANG Jun

    2005-01-01

    A series of simulation experiments of nitrogen transportation, absorption and transformation were conducted, and the different cropping patterns of winter wheat and wastewater irrigation plans were taken into consideration. Based on the experiments, an integrated model of crop growth, roots distribution, water and nitrogen absorption by roots, water and nitrogen movement and transformation in soilcrop system by two-dimension was developed. Parameters and boundary conditions were identified and an effective computing method for optimizing watering and wastewater irrigating plans was provided.

  11. Nitrogen transformations following tropical forest felling and burning on a volcanic soil

    Science.gov (United States)

    Matson, Pamela A.; Vitousek, Peter M.; Ewel, John J.; Mazzarino, Maria Julia; Robertson, G. Philip

    1987-01-01

    Nitrogen transformations and loss were measured following forest clearing in a relatively fertile tropical forest site. Nitrogen mineralization, nitrification, and amounts of ammonium and nitrate increased substantially in surface soils during the 6 mo following burning, then returned to background levels. The nitrogen content of microbial biomass declined to half its original value 6 mo after clearing and remained low in the cleared sites. Plant uptake of nitrogen was substantial on cleared plots (50 g/sq m), but it accounted for only 18 percent of N-15 label added to field plots. MIcrobial immobilization of N-15 was small relative to that in a cleared temperate site, and measurements of denitrification potentials suggested that relatively little mineralized nitrogen was lost to the atmosphere. Substantial amounts of nitrogen (40-70 g/sq m) were retained as exchangeably bound nitrate deep in the soils of a cleared plot on which revegetation was prevented; this process accounted for 12 percent of the N-15 label added to field plots.

  12. NitroScape: A model to integrate nitrogen transfers and transformations in rural landscapes

    Energy Technology Data Exchange (ETDEWEB)

    Duretz, S. [INRA-AgroParisTech, UMR 1091 Environnement et Grandes Cultures (EGC), 78850 Thiverval-Grignon (France); Drouet, J.L., E-mail: Jean-Louis.Drouet@grignon.inra.fr [INRA-AgroParisTech, UMR 1091 Environnement et Grandes Cultures (EGC), 78850 Thiverval-Grignon (France); Durand, P. [INRA-AgroCampus, UMR 1069 Sol Agro et hydrosysteme Spatialisation (SAS), 35042 Rennes cedex (France); Hutchings, N.J. [Department of Agroecology, Faculty of Agricultural Sciences, University of Aarhus (AU), Blichers Alle, 8830 Tjele (Denmark); Theobald, M.R. [Department of Chemistry and Agricultural Analysis, Technical University of Madrid (UPM), 28040 Madrid (Spain); Centre for Ecology and Hydrology (CEH), Bush Estate, Penicuik, Midlothian EH26 0QB (United Kingdom); Salmon-Monviola, J. [INRA-AgroCampus, UMR 1069 Sol Agro et hydrosysteme Spatialisation (SAS), 35042 Rennes cedex (France); Dragosits, U. [Centre for Ecology and Hydrology (CEH), Bush Estate, Penicuik, Midlothian EH26 0QB (United Kingdom); Maury, O. [INRA-AgroParisTech, UMR 1091 Environnement et Grandes Cultures (EGC), 78850 Thiverval-Grignon (France); Sutton, M.A. [Centre for Ecology and Hydrology (CEH), Bush Estate, Penicuik, Midlothian EH26 0QB (United Kingdom); Cellier, P. [INRA-AgroParisTech, UMR 1091 Environnement et Grandes Cultures (EGC), 78850 Thiverval-Grignon (France)

    2011-11-15

    Modelling nitrogen transfer and transformation at the landscape scale is relevant to estimate the mobility of the reactive forms of nitrogen (N{sub r}) and the associated threats to the environment. Here we describe the development of a spatially and temporally explicit model to integrate N{sub r} transfer and transformation at the landscape scale. The model couples four existing models, to simulate atmospheric, farm, agro-ecosystem and hydrological N{sub r} fluxes and transformations within a landscape. Simulations were carried out on a theoretical landscape consisting of pig-crop farms interspersed with unmanaged ecosystems. Simulation results illustrated the effect of spatial interactions between landscape elements on N{sub r} fluxes and losses to the environment. More than 10% of the total N{sub 2}O emissions were due to indirect emissions. The nitrogen budgets and transformations of the unmanaged ecosystems varied considerably, depending on their location within the landscape. The model represents a new tool for assessing the effect of changes in landscape structure on N{sub r} fluxes. - Highlights: > The landscape scale is relevant to study how spatial interactions affect N{sub r} fate. > The NitroScape model integrates N{sub r} transfer and transformation at landscape scale. > NitroScape couples existing atmospheric, farm, agro-ecosystem and hydrological models. > Data exchanges within NitroScape are dynamic and spatially distributed. > More than 10% of the simulated N{sub 2}O emissions are due to indirect emissions. - A model integrating terrestrial, hydrological and atmospheric processes of N{sub r} transfer and transformation at the landscape scale has been developed to simulate the effect of spatial interactions between landscape elements on N{sub r} fate.

  13. Fourier transform infrared spectroscopic study of intact cells of the nitrogen-fixing bacterium Azospirillum brasilense

    Science.gov (United States)

    Kamnev, A. A.; Ristić, M.; Antonyuk, L. P.; Chernyshev, A. V.; Ignatov, V. V.

    1997-06-01

    The data of Fourier transform infrared (FTIR) spectroscopic measurements performed on intact cells of the soil nitrogen-fixing bacterium Azospirillum brasilense grown in a standard medium and under the conditions of an increased metal uptake are compared and discussed. The structural FTIR information obtained is considered together with atomic absorption spectrometry (AAS) data on the content of metal cations in the bacterial cells. Some methodological aspects concerning preparation of bacterial cell samples for FTIR measurements are also discussed.

  14. Nitrogen transformations in intensive aquaculture system and its implication to climate change through nitrous oxide emission.

    Science.gov (United States)

    Hu, Zhen; Lee, Jae Woo; Chandran, Kartik; Kim, Sungpyo; Sharma, Keshab; Brotto, Ariane Coelho; Khanal, Samir Kumar

    2013-02-01

    The rapid development of aquaculture could result in significant environmental concerns such as eutrophication and climate change. However, to date, very few studies have been conducted to investigate nitrogen transformations in aquaculture systems; and specifically the emission of nitrous oxide (N(2)O), which is an important greenhouse gas and ozone-depleting substance. In this study, nitrogen transformations in intensive laboratory-scale Chinese catfish (Clarias fuscus) aquaculture systems were investigated by identifying and quantifying N(2)O emissions. Results indicated that about 1.3% of the nitrogen input was emitted as N(2)O gas. Dissolved oxygen (DO) concentrations and feeding rates had significant effects on N(2)O emissions. Higher N(2)O emissions were obtained in aquaculture systems with lower DO concentrations and higher feeding rates. Both nitrification and denitrification appeared to be responsible for the emissions of N(2)O. Key factors which correlated with the N(2)O emission rate in aquaculture systems were NO(2)(-), DO and total ammonia nitrogen concentrations.

  15. Molybdenum supply and biological fixation of nitrogen by two Brazilian common bean cultivars

    Directory of Open Access Journals (Sweden)

    Alinne da Silva

    Full Text Available ABSTRACT The common bean has been considered to have low biological nitrogen fixation capacity; however, this process can be made more effective with molybdenum (Mo supplementation. The objective of this study was to evaluate the influence of Mo rates on the growth and biological nitrogen fixation by two Brazilian common bean cultivars using the 15N isotope dilution technique. The experiment was performed in 2014 in a completely randomized design arranged in a 5 x 3 factorial scheme, corresponding to 5 rates of Mo (control, 40, 80, 120 and 240 g ha-1, the common bean cultivars Aporé, Ouro Negro and NORH-54 (a non-nodulating common bean cultivar, and three replicates. The application of Mo and the inoculation with rhizobia strains contributed to improving nitrogen fixation and grain weight. The cultivar Ouro Negro showed a higher number and weight of nodules and a higher amount of nitrogen derived from the atmosphere than the cultivar Aporé. The biological nitrogen fixation of Aporé was more dependent on the application of Mo. These results indicated that inoculation with Rhizobium strains and Mo supply effectively contributed to biological nitrogen fixation and improving grain production.

  16. Enzymology of biological nitrogen fixation. Final report, May 1, 1987--April 30, 1996

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1997-05-01

    Biological nitrogen fixation is of central importance in the earth`s nitrogen economy. Fixation of nitrogen is accomplished by a variety of microorganisms, all of them procaryotic. Some operate independently and some function symbiotically or associatively with photosynthesizing plants. Biological nitrogen fixation is accomplished via the reaction: N{sub 2} + 8H{sup +} + 8e{sup {minus}} {yields} 2NH{sub 3} + H{sub 2}. This reaction requires a minimum of 16 ATP under ideal laboratory conditions, so it is obvious that the energy demand of the reaction is very high. When certain nitrogen-fixing organisms are supplied fixed nitrogen (e.g., ammonium) the organisms use the fixed nitrogen and turn off their nitrogenase system, thus conserving energy. When the fixed nitrogen is exhausted, the organism reactivates its nitrogenase. The system is turned off by dinitrogenase reductase ADP-ribosyl transferase (DRAT) and turned back on by dinitrogenase reductase-activating glycohydrolase (DRAG). The authors have investigated the details of how DRAT and DRAG are formed, how they function, and the genetics of their formation and operation.

  17. The effect of urea fertiliser formulations on gross nitrogen transformations in a permanent grassland soil.

    Science.gov (United States)

    Harty, Mary; Mueller, Christoph; Laughlin, Ronnie; Watson, Catherine; Richards, Karl; Lanigan, Gary; Forrestal, Patrick; McGeough, Karen

    2015-04-01

    Introduction By 2050, the current food production rate will need to increase by 70 % in order to meet the needs of the projected world population (FAO, 2014). Under the climate change response bill, Ireland has a target to reduce GHG emissions by 20% by 2020. Agriculture was responsible for almost one third of Ireland's overall Greenhouse Gas (GHG) emissions in 2012, with 39% of these emissions arising from chemical/organic fertilisers in the form of nitrous oxide (N2O). N2O losses represent environmental damage through ozone depletion and global warming as well as acidification, eutrophication, surface and groundwater contamination and it also represents financial loss to the farmer (Cameron 2013). The contradictory aims of increasing food production while reducing GHG emissions will require an adjustment to the current system of agricultural production. As part of a larger study evaluating the switching of nitrogen (N) fertiliser formulation to minimise N2O emissions, (from calcium ammonium nitrate (CAN) to urea based formulations), this experiment examined the effect of urea based fertiliser formulations on gross N transformations in a permanent pasture soil at Hillsborough, Co. Down, Northern Ireland. Study Design/Methodology A laboratory incubation study was undertaken, to examine the effect of urea in various combinations with two types of inhibitors on soil N dynamics and N2O and N2 emissions. The inhibitors examined were the urease inhibitor N-(butyl) thiophosphoric triamide (nBTPT) and the nitrification inhibitor dicyandiamide (DCD). The fertiliser products were labelled with 15N and the soil was incubated at 15 ° C at a water filled pore space of 65%. Soil mineral N (urea, NH4+, NO2- and NO3-) concentrations, gaseous losses (N2O and N2) and the 15N enrichments of NH4+, NO2-, NO3-, N2O and N2were analysed on 8 separate occasions over 25 days. An adapted numerical 15N tracing model (Müller et al., 2007) was used to quantify the effect of the inhibitors on

  18. Nitrogen transformations and greenhouse gas emissions from a riparian wetland soil: An undisturbed soil column study

    Energy Technology Data Exchange (ETDEWEB)

    Munoz-Leoz, Borja [Department of Chemical and Environmental Engineering, University of the Basque Country, UPV/EHU, E-48013 Bilbao (Spain); Antigueedad, Inaki [Department of Geodynamic, University of the Basque Country, UPV/EHU, E-48940 Leioa (Spain); Garbisu, Carlos [Department of Ecosystems, NEIKER-Tecnalia, E-48160 Derio (Spain); Ruiz-Romera, Estilita, E-mail: estilita.ruiz@ehu.es [Department of Chemical and Environmental Engineering, University of the Basque Country, UPV/EHU, E-48013 Bilbao (Spain)

    2011-01-15

    Riparian wetlands bordering intensively managed agricultural fields can act as biological filters that retain and transform agrochemicals such as nitrate and pesticides. Nitrate removal in wetlands has usually been attributed to denitrification processes which in turn imply the production of greenhouse gases (CO{sub 2} and N{sub 2}O). Denitrification processes were studied in the Salburua wetland (northern Spain) by using undisturbed soil columns which were subsequently divided into three sections corresponding to A-, Bg- and B2g-soil horizons. Soil horizons were subjected to leaching with a 200 mg NO{sub 3}{sup -} L{sup -1} solution (rate: 90 mL day{sup -1}) for 125 days at two different temperatures (10 and 20 {sup o}C), using a new experimental design for leaching assays which enabled not only to evaluate leachate composition but also to measure gas emissions during the leaching process. Column leachate samples were analyzed for NO{sub 3}{sup -} concentration, NH{sub 4}{sup +} concentration, and dissolved organic carbon. Emissions of greenhouse gases (CO{sub 2} and N{sub 2}O) were determined in the undisturbed soil columns. The A horizon at 20 {sup o}C showed the highest rates of NO{sub 3}{sup -} removal (1.56 mg N-NO{sub 3}{sup -} kg{sup -1} DW soil day{sup -1}) and CO{sub 2} and N{sub 2}O production (5.89 mg CO{sub 2} kg{sup -1} DW soil day{sup -1} and 55.71 {mu}g N-N{sub 2}O kg{sup -1} DW soil day{sup -1}). For the Salburua wetland riparian soil, we estimated a potential nitrate removal capacity of 1012 kg N-NO{sub 3}{sup -} ha{sup -1} year{sup -1}, and potential greenhouse gas emissions of 5620 kg CO{sub 2} ha{sup -1} year{sup -1} and 240 kg N-N{sub 2}O ha{sup -1} year{sup -1}. - Research Highlights: {yields}A new experimental design is proposed for leaching assays to simulate nitrogen transformations in riparian wetland soil. {yields}Denitrification is the main process responsible for nitrate removal in the riparian zone of Salburua wetland. {yields

  19. The Human Genome Project: big science transforms biology and medicine.

    Science.gov (United States)

    Hood, Leroy; Rowen, Lee

    2013-01-01

    The Human Genome Project has transformed biology through its integrated big science approach to deciphering a reference human genome sequence along with the complete sequences of key model organisms. The project exemplifies the power, necessity and success of large, integrated, cross-disciplinary efforts - so-called 'big science' - directed towards complex major objectives. In this article, we discuss the ways in which this ambitious endeavor led to the development of novel technologies and analytical tools, and how it brought the expertise of engineers, computer scientists and mathematicians together with biologists. It established an open approach to data sharing and open-source software, thereby making the data resulting from the project accessible to all. The genome sequences of microbes, plants and animals have revolutionized many fields of science, including microbiology, virology, infectious disease and plant biology. Moreover, deeper knowledge of human sequence variation has begun to alter the practice of medicine. The Human Genome Project has inspired subsequent large-scale data acquisition initiatives such as the International HapMap Project, 1000 Genomes, and The Cancer Genome Atlas, as well as the recently announced Human Brain Project and the emerging Human Proteome Project.

  20. NOx and N2O precursors from biomass pyrolysis: nitrogen transformation from amino acid.

    Science.gov (United States)

    Ren, Qiangqiang; Zhao, Changsui

    2012-04-01

    Large quantities of NO(x) and N(2)O emissions can be produced from biomass burning. Understanding nitrogen behavior during biomass pyrolysis is crucial. Nitrogen in biomass is mainly in forms of proteins (amino acids). Phenylalanine, aspartic acid, and glutamic acid were used as the model compounds for the nitrogen in biomass. Release behavior tests of nitrogen species from the three amino acids during pyrolysis in argon and gasification with O(2) and CO(2) were performed using a thermogravimetric analyzer (TGA) coupled with a Fourier transform infrared (FTIR) spectrometer. The results indicate that although the influence of oxygen and CO(2) in the atmosphere on nitrogen behavior is different for the amino acids, it is interesting to find some phenomenon in common. The presence of oxygen promotes NO and HNCO formation for all the three amino acids; HCN and HNCO formation are suppressed by introduced CO(2) for all the three amino acids. This can reveal the N-conversion mechanism from biomass in depth under the same conditions.

  1. BIOLOGICAL NITROGEN REMOVAL FROM WASTEWATER BY DENITRIFICATION OF MIX-CULTURING FUNGI AND BACTERIA

    Institute of Scientific and Technical Information of China (English)

    TAKAYA; Naoki; SHOUN; Hirofumi

    2006-01-01

    Denitrificationis a biological processin which nitrateand/or nitrite is reduced to gaseous nitrogen,dinitrogen(N2)or nitrous oxide(N2O)while carbon dioxide is thesecond gaseous product of the process.This is one of themain mechanisms of the global nitrogen cycle,and playsanimportant role as the reverse reaction of nitrogen fixa-tion in maintaining global environmental homeostasis[1].Denitrification has beenlongthought to be a unique char-acteristic of prokaryotes[2,3].Anumber of bacteria(suchasPseudomonas s...

  2. Microbial Nitrogen Transformations in the Oxygen Minimum Zone off Peru, 01 February 1985 to 05 March 1985 (NODC Accession 9200026)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NITROP - 85 was the major field of experiment of an N.S.F. funded program entitled "Microbial Nitrogen Transformations in the Oxygen Minimum Zone off Peru". this...

  3. Effect of Nitrogen Fertilizer on Combined Forms and Transformation of Fluorine in Tea Garden Soil

    Directory of Open Access Journals (Sweden)

    ZHANG Yong-li

    2015-10-01

    Full Text Available In order to investigate the effect of nitrogen fertilizer on combined forms and transformation of fluorine in tea garden soil, soil pot experiment was carried out. The research object was red-yellow soil in Shizipu tea plantation in the south of Anhui Province. Five treatments were N0P0K0 (CK, N0P1K1 (N0, N1P1K1 (N1, N2P1K1 (N2, N3P1K1 (N3. Water-soluble fluorine content, exchangeable fluorine content, Fe/Mn oxide-bound fluorine content, organic matter-bound fluorine content, ammonium nitrogen content and soil pH value in 0~15 cm soil layer were analyzed in 10, 20, 30, 50, 70, 90 days after fertilization. The results showed that compared with CK, in the short term (10 or 20 days after applying NPK, the content of water-soluble fluorine in 0~15 cm soil layer was decreased and the content of exchangeable fluorine, Fe/Mn oxide-bound fluorine and organic matter-bound fluorine were increased. After 20 days, the content of soil water-soluble fluorine was increased and the content of soil exchangeable fluorine, Fe/Mn oxide-bound fluorine and organic matter-bound fluorine were reduced. The effect on water-soluble fluorine and exchangeable fluorine increased with time and the application rate of nitrogen. The content of water-soluble fluorine in tea garden soil had a moderately positive correlation with the application rate of nitrogen while the content of exchangeable fluorine had a moderately or highly negative correlation with the application rate of nitrogen. The content of water-soluble fluorine had a quite highly negative correlation with the soil pH (P<0.01, but the content of exchangeable fluorine had a moderately or highly negative correlation with the soil pH (P<0.01. Therefore, nitrogen fertilizer changed the soil pH during its form transformation and thus affected the transformation and the availability of fluorine in soil.

  4. [Biological Process Oriented Online Fourier Transform Infrared Spectrometer].

    Science.gov (United States)

    Xie, Fei; Wu, Qiong-shui; Zeng, Li-bo

    2015-08-01

    An online Fourier Transform Infrared Spectrometer and an ATR (Attenuated Total Reflection) probe, specifically at the application of real time measurement of the reaction substrate concentration in biological processes, were designed. (1) The spectrometer combined the theories of double cube-corner reflectors and flat mirror, which created a kind of high performance interferometer system. The light path folding way was utilized to makes the interferometer compact structure. Adopting double cube-corner reflectors, greatly reduces the influence of factors in the process of moving mirror movement such as rotation, tilt, etc. The parallelogram oscillation flexible support device was utilized to support the moving mirror moves. It cancelled the friction and vibration during mirror moving, and ensures the smooth operation. The ZnSe splitter significantly improved the hardware reliability in high moisture environment. The method of 60° entrance to light splitter improves the luminous flux. (2) An ATR in situ measuring probe with simple structure, large-flux, economical and practical character was designed in this article. The transmission of incident light and the light output utilized the infrared pipe with large diameter and innerplanted-high plating membrane, which conducted for the infrared transmission media of ATR probe. It greatly reduced the energy loss of infrared light after multiple reflection on the inner wall of the light pipe. Therefore, the ATR probe obtained high flux, improved the signal strength, which make the signal detected easily. Finally, the high sensitivity of MCT (Mercury Cadmium Telluride) detector was utilized to realize infrared interference signal collection, and improved the data quality of detection. The test results showed that the system yields the advantages of perfect moisture-proof performance, luminous flux, online measurement, etc. The designed online Fourier infrared spectrometer can real-time measured common reactant substrates

  5. Present status and development on biological nitrogen fixation research in China

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    This presentation introduces the advances in biological nitrogen fixation research abroad, in particular, describes the great progress and achievements on its research in China as follows: collection of rhizobial resources and establishment of the largest database of Rhizobium in China, correction and development of Rhizobium taxonomy in international; discovery of a couple of nif genes, identification and unification of linkage among the nif gene operons of Klebsiella pneumoniae, finding of regulative mechanism of positive regulation nif gene and its sensitivity to oxygen, temperature; finding of the activity of nodulation gene nodD3 product in Sinorhizobium meliloti which is not controlled by flavonoid produced from its host alfalfa; finding of the association between expression of genes coding the products for carbon utilization and nitrogen metabolism and their regulations; chemical synthesis of nodulation factor of Sinorhizobium meliloti; constructions of engineered nitrogen fixers and utilization in practice based on the research of gene expression and regulation; chemical simulation of the structure and function of nitrogenase and bringing forward the model of nitrogenase active center for the first time in international and synthesis of model compounds which were paid attention by colleagues abroad. Finally, the development of nitrogen fixation research in China in future has been put forward, suggesting that the nif gene regulation and its role in providing crops with nitrogen element, signal transduction and molecular interactions between Rhizobium and legume, coupling between carbon and nitrogen metabolisms, nitrogen fixation and photosynthesis, and functional genomics of nitrogen-fixing nodule symbiosis, etc., would be actively worked on.

  6. Genetic Improvement of Biological Nitrogen Fixation in Common Bean Genotypes (Phaseolus vulgaris L.

    Directory of Open Access Journals (Sweden)

    Ahmad Reza Golparvar

    2012-06-01

    Full Text Available Fifty common bean genotypes were cultivated in two separately field trials at the research station of Islamic Azad University, Khorasgan Branch during 2008-2009. The experimental design was randomized complete block. Bean seeds were inoculated by Rhizobium legominosarum biovar Phaseoli isolate L-109 in one of the experiments before sowing. The dose of Rhizobium for seed inoculation was 7 miligrams of bacteria for 1 kilogram of seed. The second experiment was control. The second experiment was analyzed in the same way as the first except for biological nitrogen fixation. The results showed definite positive and significant correlation in percentage of nitrogen fixation with some other been characters. Step-wise regression designated that total nitrogen percentage in shoot, number of nodules per plant and biomass yield accounted for 93.8% of variation expect for nitrogen fixation percent. Path analysis indicated that total nitrogen percentage in shoot, number of nodules per plant and biomass yield have direct and positive effect on nitrogen fixation index. Hence, total nitrogen percentage in shoot, number of nodules per plant and biomass yield are promising indirect selection criteria for genetic improvement of nitrogen fixation capability in common bean genotypes.

  7. [Transformation of inorganic nitrogen in slag-wetland during the start-up period].

    Science.gov (United States)

    Sun, Shu-Ming; Shan, Bao-Qing; Peng, Wan-Jiang

    2009-05-15

    Lab-scale subsurface flow slag-wetlands were constructed to study the removal efficiency and transformation processes of low-concentration inorganic N during the start-up period. As for ammonium-dominated wastewater, the removal rates of total nitrogen (TN), ammonium nitrogen (NH4(+)-N), nitrate nitrogen (NO3(-)-N) and nitrite nitrogen (NO2(-)-N) were 0.12 g x (m2 x d)(-1), 0.07 g x (m2 x d)(-1), 0.10 g x (m2 x d)(-1) and 0.04 g x (m2 x d)(-1), respectively. Nitrifying bacteria was not detected by fluorescence in situ hybridization (FISH) on the slag. NH3 volatilization is the main contribution for N removal resulting from high pH (> 10) and surface soil absorbed most of NH3. For nitrate-dominated wastewater, the removal rates of TN and NO3(-)-N were 0.23 g x (m2 x d)(-1) and 0.48 g x (m2 x d)(-1), and NO2(-)-N accumulated by 0.22 g x (m2 x d)(-1) during the process of denitrification. Removal efficiency of inorganic N for nitrate-dominated wastewater was higher than that for ammonium-dominated wastewater during the start-up period of slag-wetlands, so steel slag can be used as a substrate in constructed wetlands for extensive treatment of nitrate pollution.

  8. Simulating nitrogen transport and transformation through urban riparian zones using a particle-tracking approach

    Science.gov (United States)

    Cui, Z.; Welty, C.; Gold, A. J.; Groffman, P. M.; Kaushal, S.; Maxwell, R. M.

    2012-12-01

    Nitrate is the most common and mobile form of nitrogen contaminant found in groundwater. Riparian zones, often identified as denitrification hot spots, play an important role in processing nitrate as it moves from uplands to streams through the subsurface. However, in urban areas, where groundwater flow paths may be altered by channel incision, it is not clear how riparian zone denitrification responds to such changes in groundwater flow paths. To quantify the effects of groundwater flow path changes on riparian zone denitrification, we are applying a recently-developed 3D numerical groundwater nitrogen transport model to this problem. Based on an existing particle-tracking code, SLIM-FAST, new components were added using the operator splitting technique to account for biogeochemical reactions. The model was verified with analytical solutions, other numerical codes, and laboratory experimental results. Here we report on application of the model to a hypothetical stream riparian site to evaluate nitrogen transformations under various groundwater flow conditions. The flow field is generated using the 3D groundwater flow code, ParFlow. The particle-tracking code uses the flow field as input and the movement and reactions of the nitrogen species are simulated by the code. Initial model simulation results confirm well-known behavior that as groundwater flow paths pass through DOC-rich riparian zones, higher denitrification rates are obtained. Ongoing simulations are being carried out to quantify the effect of stream downcutting on the denitrification process.

  9. Effects of myclobutanil on soil microbial biomass, respiration, and soil nitrogen transformations.

    Science.gov (United States)

    Ju, Chao; Xu, Jun; Wu, Xiaohu; Dong, Fengshou; Liu, Xingang; Zheng, Yongquan

    2016-01-01

    A 3-month-long experiment was conducted to ascertain the effects of different concentrations of myclobutanil (0.4 mg kg(-1) soil [T1]; 1.2 mg kg(-1) soil [T3]; and 4 mg kg(-1) soil [T10]) on soil microbial biomass, respiration, and soil nitrogen transformations using two typical agricultural soils (Henan fluvo-aquic soil and Shanxi cinnamon soil). Soil was sampled after 7, 15, 30, 60, and 90 days of incubation to determine myclobutanil concentration and microbial parameters: soil basal respiration (RB), microbial biomass carbon (MBC) and nitrogen (MBN), NO(-)3-N and NH(+)4-N concentrations, and gene abundance of total bacteria, N2-fixing bacteria, fungi, ammonia-oxidizing archaea (AOA), and ammonia-oxidizing bacteria (AOB). The half-lives of the different doses of myclobutanil varied from 20.3 to 69.3 d in the Henan soil and from 99 to 138.6 d in the Shanxi soil. In the Henan soil, the three treatments caused different degrees of short-term inhibition of RB and MBC, NH(+)4-N, and gene abundance of total bacteria, fungi, N2-fixing bacteria, AOA, and AOB, with the exception of a brief increase in NO(-)3-N content during the T10 treatment. The MBN (immobilized nitrogen) was not affected. In the Shanxi soil, MBC, the populations of total bacteria, fungi, and N2-fixing bacteria, and NH(+)4-N concentration were not significantly affected by myclobutanil. The RB and MBN were decreased transitorily in the T10 treatment. The NO(-)3-N concentrations and the abundance of both AOA and AOB were erratically stimulated by myclobutanil. Regardless of whether stimulation or suppression occurred, the effects of myclobutanil on the two soil types were short term. In summary, myclobutanil had no long-term negative effects on the soil microbial biomass, respiration, and soil nitrogen transformations in the two types of soil, even at 10-fold the recommended dosage.

  10. Flush of CO2 as a biologically based tool to predict nitrogen mineralization from soil

    Science.gov (United States)

    A biologically based tool to improve nitrogen (N) management in cereal crops is currently lacking from soil testing programs, but very much needed to optimize N fertilizer inputs to be able apply enough N fertilizer to achieve high production and avoid excess application that is damaging to the envi...

  11. Biological soil crusts accelerate the nitrogen cycle through large NO and HONO emissions in drylands.

    Science.gov (United States)

    Weber, Bettina; Wu, Dianming; Tamm, Alexandra; Ruckteschler, Nina; Rodríguez-Caballero, Emilio; Steinkamp, Jörg; Meusel, Hannah; Elbert, Wolfgang; Behrendt, Thomas; Sörgel, Matthias; Cheng, Yafang; Crutzen, Paul J; Su, Hang; Pöschl, Ulrich

    2015-12-15

    Reactive nitrogen species have a strong influence on atmospheric chemistry and climate, tightly coupling the Earth's nitrogen cycle with microbial activity in the biosphere. Their sources, however, are not well constrained, especially in dryland regions accounting for a major fraction of the global land surface. Here, we show that biological soil crusts (biocrusts) are emitters of nitric oxide (NO) and nitrous acid (HONO). Largest fluxes are obtained by dark cyanobacteria-dominated biocrusts, being ∼20 times higher than those of neighboring uncrusted soils. Based on laboratory, field, and satellite measurement data, we obtain a best estimate of ∼1.7 Tg per year for the global emission of reactive nitrogen from biocrusts (1.1 Tg a(-1) of NO-N and 0.6 Tg a(-1) of HONO-N), corresponding to ∼20% of global nitrogen oxide emissions from soils under natural vegetation. On continental scales, emissions are highest in Africa and South America and lowest in Europe. Our results suggest that dryland emissions of reactive nitrogen are largely driven by biocrusts rather than the underlying soil. They help to explain enigmatic discrepancies between measurement and modeling approaches of global reactive nitrogen emissions. As the emissions of biocrusts strongly depend on precipitation events, climate change affecting the distribution and frequency of precipitation may have a strong impact on terrestrial emissions of reactive nitrogen and related climate feedback effects. Because biocrusts also account for a large fraction of global terrestrial biological nitrogen fixation, their impacts should be further quantified and included in regional and global models of air chemistry, biogeochemistry, and climate.

  12. Effect of a sulfonated azo dye and sulfanilic acid on nitrogen transformation processes in soil.

    Science.gov (United States)

    Topaç, F Olcay; Dindar, Efsun; Uçaroğlu, Selnur; Başkaya, Hüseyin S

    2009-10-30

    Introduction of organic dyes into soil via wastewater and sludge applications has been of increasing concern especially in developing or under-developed countries where appropriate management strategies are scarce. Assessing the response of terrestrial ecosystems to organic dyes and estimating the inhibition concentrations will probably contribute to soil remediation studies in regions affected by the same problem. Hence, an incubation study was conducted in order to investigate the impact of a sulfonated azo dye, Reactive Black 5 (RB5) and sulfanilic acid (SA), a typical representative of aromatic sulfonated amines, on soil nitrogen transformation processes. The results apparently showed that nitrogen related processes in soil can be used as bioindicators of anthropogenic stress caused by organic dyes. It was found that urease activity, arginine ammonification rate, nitrification potential and ammonium oxidising bacteria numbers decreased by 10-20% and 7-28% in the presence of RB5 (> 20 mg/kg dry soil) and SA (> 8 mg/kg dry soil), respectively. Accordingly, it was concluded that organic dye pollution may restrict the nitrogen-use-efficiency of plants, thus further reducing the productivity of terrestrial ecosystems. Furthermore, the response of soil microbiota to SA suggested that inhibition effects of the organic dye may continue after the possible reduction of the parent dye to associated aromatic amines.

  13. [Effect of DMPP on inorganic nitrogen transformation and leaching in vertical flow of simulated soil column].

    Science.gov (United States)

    Yu, Qiao-Gang; Chen, Ying-Xu; Zhang, Qiu-Ling; Liang, Xin-Qiang; Li, Hua; Zhang, Zhi-Jian

    2007-04-01

    Using a multi-layer soil column device, the effect of new nitrification inhibitor DMPP (3,4-dimethyl pyrazole phosphate) on nitrogen leaching was studied for understanding the nitrogen vertical transformation and lowering the nitrogen leaching losses. The results indicate that, within 60 days of experiment, the regular urea added with 1% of DMPP can effectively inhibit the ammonium oxidation in the soil, and improve the concentration of NH4(+) -N in soil solution over the 20 cm tilth profile, while decline the concentrations of NO3(-) -N and N2(-) -N. No obvious difference is found on NH4(+) -N concentrations collected from deep layer soil solution under 20 cm between regular urea and the urea added with 1% of DMPP. There is also no significant difference for the NH4(+) -N and NO3(-) -N in the soil solution of deep layer under 40 cm among the treatments of urea by adding with 1% of DMPP within 60 days. So DMPP could be used as an effective nitrification inhibitor to control ammonium oxidation, decline the nitrate leaching losses, minimize the underground water pollution risk and be beneficial for the ecological environment.

  14. Transformation and Deposition of Sulphur and Nitrogen Compounds in the Marine Boundary Layer

    Energy Technology Data Exchange (ETDEWEB)

    Hertel, O.

    1995-10-01

    In this thesis the author performs a model study of the transformation and deposition of sulphur and nitrogen compounds in the marine boundary layer, including source-receptor relationships. The central part of the study is the development and testing of a variable scale trajectory model for Europe, with special emphasis on modelling the concentrations of gases and aerosols in the marine atmosphere and the deposition to sea. A one-dimensional version of the model was developed to model the chemical degradation of dimethyl sulphide (DMS) in the marine boundary layer. Although the model reproduces the observed levels of DMS and methane sulphonic acid (MSA) well, the calculated DMS concentration is not always in phase with observed levels, probably because of a local coastal emission that is correlated with the shifting tide. Another version of the trajectory model, Atmospheric Chemistry and Deposition model (ACDEP), was developed to study the deposition of nitrogen compounds to the Danish sea waters. This model uses a new numerical scheme, the Eulerian Backward Iterative method. The model is able to reproduce observations of air concentrations and wet deposition fairly well; data for dry deposition were not available. The model was also used for calculation of deposition of nitrogen compounds to the Kattegat. Finally, a sensitivity study was performed on the model. 175 refs., 87 figs., 32 tabs.

  15. Effects of pH on nitrogen transformations in media-based aquaponics.

    Science.gov (United States)

    Zou, Yina; Hu, Zhen; Zhang, Jian; Xie, Huijun; Guimbaud, Christophe; Fang, Yingke

    2016-06-01

    To investigate the effects of pH on performance and nitrogen transformations in aquaponics, media-based aquaponics operated at pH 6.0, 7.5 and 9.0 were systematically examined and compared in this study. Results showed that nitrogen utilization efficiency (NUE) reached its maximum of 50.9% at pH 6.0, followed by 47.3% at pH 7.5 and 44.7% at pH 9.0. Concentrations of nitrogen compounds (i.e., TAN, NO2(-)-N and NO3(-)-N) in three pH systems were all under tolerable levels. pH had significant effect on N2O emission and N2O conversion ratio decreased from 2.0% to 0.6% when pH increased from 6.0 to 9.0, mainly because acid environment would inhibit denitrifiers and lead to higher N2O emission. 75.2-78.5% of N2O emission from aquaponics was attributed to denitrification. In general, aquaponics was suggested to maintain pH at 6.0 for high NUE, and further investigations on N2O mitigation strategy are needed.

  16. Nitrogen transformations and retention in planted and artificially aerated constructed wetlands.

    Science.gov (United States)

    Maltais-Landry, Gabriel; Maranger, Roxane; Brisson, Jacques; Chazarenc, Florent

    2009-02-01

    Nitrogen (N) processing in constructed wetlands (CWs) is often variable, and the contribution to N loss and retention by various pathways (nitrification/denitrification, plant uptake and sediment storage) remains unclear. We studied the seasonal variation of the effects of artificial aeration and three different macrophyte species (Phragmites australis, Typha angustifolia and Phalaris arundinacea) on N processing (removal rates, transformations and export) using experimental CW mesocosms. Removal of total nitrogen (TN) was higher in summer and in planted and aerated units, with the highest mean removal in units planted with T. angustifolia. Export of ammonium (NH(4)(+)), a proxy for nitrification limitation, was higher in winter, and in unplanted and non-aerated units. Planted and aerated units had the highest export of oxidized nitrogen (NO(y)), a proxy for reduced denitrification. Redox potential, evapotranspiration (ETP) rates and hydraulic retention times (HRT) were all predictors of TN, NH(4)(+) and NO(y) export, and significantly affected by plants. Denitrification was the main N sink in most treatments accounting for 47-62% of TN removal, while sediment storage was dominant in unplanted non-aerated units and units planted with P. arundinacea. Plant uptake accounted for less than 20% of the removal. Uncertainties about the long-term fate of the N stored in sediments suggest that the fraction attributed to denitrification losses could be underestimated in this study.

  17. Biological Inquiry: A New Course and Assessment Plan in Response to the Call to Transform Undergraduate Biology

    Science.gov (United States)

    Goldey, Ellen S.; Abercrombie, Clarence L.; Ivy, Tracie M.; Kusher, Dave I.; Moeller, John F.; Rayner, Doug A.; Smith, Charles F.; Spivey, Natalie W.

    2012-01-01

    We transformed our first-year curriculum in biology with a new course, Biological Inquiry, in which greater than 50% of all incoming, first-year students enroll. The course replaced a traditional, content-driven course that relied on outdated approaches to teaching and learning. We diversified pedagogical practices by adopting guided inquiry in…

  18. Monitoring of Biological Nitrogen Removal in Tannery Wastewater Using a Sequencing Batch Reactor

    Directory of Open Access Journals (Sweden)

    Carrasquero-Ferrer Sedolfo José

    2014-04-01

    Full Text Available The objective of this research was to relate the biological nitrogen removal in tannery wastewater with profiles of pH, alkalinity and redox potential (ORP using a sequencing batch reactor (SBR with a working volume of 2 L. The reactor worked under two operational sequences: anoxic-aerobic-anoxic (Ax/Ae/Ax and aerobic-anoxic (Ae/Ax, which were combined with two cell retention times (CRT (15 and 25 days, with an operation cycle time (OCT of 11 hours. The profiles were performed by measuring each 15 minutes the following parameters: pH, dissolved oxygen (DO, ORP, and each hour the parameters: total alkalinity, total chemical oxygen demand (DQOT, soluble chemical oxygen demand (DQOS, total Kjeldahl nitrogen (TKN, nitrite (NO2-, nitrate (NO3- and ammonia nitrogen (N-NH4+. Alkalinity and ORP profile were excellent indicators of the processes of biological nitrogen removal. However, pH could not be used as a control parameter, due to the buffering capacity of tannery wastewater. Finally, this research work showed that alkalinity and ORP values can be used as on-line control parameters to monitor the evolution of the nitrogen removal in tannery wastewater (nitrification and denitrification processes.

  19. Modeling nitrogen transport and transformation in aquifers using a particle-tracking approach

    Science.gov (United States)

    Cui, Zhengtao; Welty, Claire; Maxwell, Reed M.

    2014-09-01

    We have integrated multispecies biodegradation and geochemical reactions into an existing particle-tracking code to simulate reactive transport in three-dimensional variably saturated media, with a focus on nitrification and denitrification processes. This new numerical model includes reactive air-phase transport so that gases such as N2 and CO2 can be tracked. Although nitrogen biodegradation is the primary problem addressed here, the method presented is also applicable to other reactive multispecies transport problems. We verified the model by comparison with (1) analytical solutions for saturated one- and two-dimensional cases; (2) a finite element model for a one-dimensional unsaturated case; and (3) laboratory observations for a one-dimensional saturated case. Good agreement between the new code and the verification problems is demonstrated. The new model can simulate nitrogen transport and transformation in a heterogeneous permeability field where sharp concentration gradients are present. An example application to nitrogen species biodegradation and transport of a plume emanating from a leaking sewer in a heterogeneous, variably saturated aquifer is presented to illustrate this capability. This example is a novel application of coupling unsaturated/saturated zone transport with nitrogen species biodegradation. The code has the computational advantages of particle-tracking algorithms, including local and global mass conservation and minimal numerical dispersion. We also present new methods for improving particle code efficiency by implementing the concept of tracking surplus/deficit particles and particle recycling in order to control the growth of particle numbers. The new model retains the advantages of the particle tracking approach such as allowing relatively low spatial and temporal resolutions to be used, while incorporating the robustness of grid-based Monod kinetics to simulate biogeochemical reactions.

  20. Nitrogen

    Science.gov (United States)

    Apodaca, Lori E.

    2013-01-01

    The article presents an overview of the nitrogen chemical market as of July 2013, including the production of ammonia compounds. Industrial uses for ammonia include fertilizers, explosives, and plastics. Other topics include industrial capacity of U.S. ammonia producers CF Industries Holdings Inc., Koch Nitrogen Co., PCS Nitrogen, Inc., and Agrium Inc., the impact of natural gas prices on the nitrogen industry, and demand for corn crops for ethanol production.

  1. Nitrogen fixation in biological soil crusts from southeast Utah, USA

    Science.gov (United States)

    Belnap, J.

    2002-01-01

    Biological soil crusts can be the dominant source of N for arid land ecosystems. We measured potential N fixation rates biweekly for 2 years, using three types of soil crusts: (1) crusts whose directly counted cells were >98% Microcoleus vaginatus (light crusts); (2) crusts dominated by M. vaginatus, but with 20% or more of the directly counted cells represented by Nostoc commune and Scytonema myochrous (dark crusts); and (3) the soil lichen Collema sp. At all observation times, Collema had higher nitrogenase activity (NA) than dark crusts, which had higher NA than light crusts, indicating that species composition is critical when estimating N inputs. In addition, all three types of crusts generally responded in a similar fashion to climate conditions. Without precipitation within a week of collection, no NA was recorded, regardless of other conditions being favorable. Low (26??C) temperatures precluded NA, even if soils were moist. If rain or snow melt had occurred 3 or less days before collection, NA levels were highly correlated with daily average temperatures of the previous 3 days (r2=0.93 for Collema crusts; r2=0.86 for dark crusts and r2=0.83 for light crusts) for temperatures between 1??C and 26??C. If a precipitation event followed a long dry period, NA levels were lower than if collection followed a time when soils were wet for extended periods (e.g., winter). Using a combination of data from a recording weather datalogger, time-domain reflectometry, manual dry-down curves, and N fixation rates at different temperatures, annual N input from the different crust types was estimated. Annual N input from dark crusts found at relatively undisturbed sites was estimated at 9 kg ha-1 year-1. With 20% cover of the N-fixing soil lichen Collema, inputs are estimated at 13 kg ha-1 year-1. N input from light crusts, generally indicating soil surface disturbance, was estimated at 1.4 kg ha-1 year-1. The rates in light crusts are expected to be highly variable, as

  2. Effective Biological Nitrogen Removal Treatment Processes for Domestic Wastewaters with Low C/N Ratios: A Review

    DEFF Research Database (Denmark)

    Sun, Sheng-Peng; Pellicer i Nàcher, Carles; Merkey, Brian

    2010-01-01

    Discharge of nitrogenous components to water bodies can cause eutrophication, deterioration of water quality, toxicity to aquatic life, and pose a potential hazard to human and animal health. Biological nitrogen removal can remove nitrogenous components via conversion to harmless nitrogen gas...... with high efficiency and relative low costs. However, the removal of nitrogen from domestic wastewater with a low carbon/nitrogen (C/N) ratio can often be limited in municipal wastewater plants (WWTPs) because organic carbon is a limiting factor for denitrification. The present work reviews innovative...... treatment processes including the modified anaerobic/anoxic/oxic (A(2)/O) process, the step-feed multistage anaerobic/ oxic (A/O) process, and new reactors like the membrane bioreactors (MBRs) and the membrane-aerated biofilm reactors (MABRs) can support the innovative biological nitrogen removal pathways...

  3. Assessment of nitrogen and sulphur cycle bacteria and shrimp production in ponds treated with biological products

    Institute of Scientific and Technical Information of China (English)

    Thangapalam Jawahar Abraham; Shubhadeep Ghosh; Debasis Sasmal

    2015-01-01

    Objective:To study the influence of biological products on the levels of nitrogen and sulphur cycle bacteria in shrimp culture systems of West Bengal, India. Methods: The pond water and sediment samples were analyzed for physico-chemical parameters as per standard methods. The bacteria involved in ammonification, nitrification, denitrification, sulphate reduction and sulphur oxidation were enumerated by most probable number technique. Results:The semi-intensive and modified extensive shrimp farms used a variety of biological products during various stages of production. No biological products were used in traditional farms. The water and sediment samples of modified extensive system recorded significantly higher mean heterotrophic bacterial counts. The counts of ammonia, nitrite and sulphur oxidizers, and nitrate and sulphate reducers varied among the systems. The cycling of nitrogen and sulphur appeared to be affected with the intensification of culture practices. Conclusions:The application of biological products in certain systems helped to maintain the bacteria involved in nitrogen and sulphur cycles and safe levels of ammonia, nitrite and nitrate. An assessment of these metabolically active bacteria in shrimp culture ponds and the application of right kind microbial products would help ameliorate the organic pollution in shrimp aquaculture.

  4. Effect of Nitrogen Content and Cooling Rate on Transformation Characteristics and Mechanical Properties for 600 MPa High Strength Rebar

    Science.gov (United States)

    Zhang, Jing; Wang, Fu-ming; Li, Chang-rong; Yang, Zhan-bing

    2016-10-01

    To obtain appropriate chemical composition and thermo-mechanical schedules for processing the V-N microalloyed 600 MPa grade high strength rebar, the microstructure analysis during dynamic continuous cooling and tensile tests of three experimental steels with different nitrogen contents were conducted. The results show that increasing nitrogen content promotes ferrite transformation and broadens the bainite transformation interval, when the nitrogen content is in the range of 0.019-0.034 mass%. Meanwhile, the martensite start temperatures decrease and the minimal cooling rate to form martensite increases. To achieve a good combination of strength and ductility, the cooling rates should be controlled in the range of 0.5-3°C/s, leading to the microstructure of ferrite, pearlite and less than 10% bainite (volume fraction). Furthermore, all the experimental steels satisfy the performance requirement of 600 MPa grade rebar and the rebar with nitrogen content of 0.034 mass% shows the highest strength through systematically comparative investigation.

  5. Soil Nitrogen Transformations and Availability in Upland Pine and Bottomland Alder Forests

    Directory of Open Access Journals (Sweden)

    Tae Kyung Yoon

    2015-08-01

    Full Text Available Soil nitrogen (N processes and inorganic N availability are closely coupled with ecosystem productivity and various ecological processes. Spatio-temporal variations and environmental effects on net N transformation rates and inorganic N concentrations in bulk soil and ion exchange resin were examined in an upland pine forest (UPF and a bottomland alder forest (BAF, which were expected to have distinguishing N properties. The annual net N mineralization rate and nitrification rate (kg N·ha−1·year−1 were within the ranges of 66.05–84.01 and 56.26–77.61 in the UPF and −17.22–72.24 and 23.98–98.74 in the BAF, respectively. In the BAF, which were assumed as N-rich conditions, the net N mineralization rate was suppressed under NH4+ accumulated soils and was independent from soil temperature. On the other hand, in the UPF, which represent moderately fertile N conditions, net N transformation rates and N availability were dependent to the generally known regulation by soil temperature and soil water content. Stand density might indirectly affect the N transformations, N availability, and ecosystem productivity through different soil moisture conditions. The differing patterns of different inorganic N indices provide useful insight into the N availability in each forest and potential applicability of ion exchange resin assay.

  6. The mechansims by which solute nitrogen affects phase transformations and mechanical properties of automotive dual-phase sheet steel

    Science.gov (United States)

    Brown, Tyson W.

    Dual-phase steels have seen increased use in automotive applications in recent years, in order to meet the goals of weight reduction and occupant safety. Variations in nitrogen content that may be encountered in steel sourced from a basic oxygen furnace process compared to an electric arc furnace process require that dual-phase steel producers understand the ways that nitrogen affects processing and properties. In the current work, the distribution of nitrogen was investigated in a dual-phase steel with a base chemistry of 0.1 C, 2.0 Mn, 0.2 Cr, 0.2 Mo (wt pct) across a range of nitrogen contents (30-159 ppm) with Al (0.2 and 0.08 wt pct), and Ti (0.02 wt pct) additions used for precipitation control of nitrogen amounts. The distribution of nitrogen amongst trapping sites, including precipitates, grain boundaries, dislocations, and interstitial sites (away from other types of defects) was determined from a combination of electrolytic dissolution, internal friction, and three-dimensional atom probe tomography experiments. Various mechanisms by which different amounts and locations of nitrogen affect phase transformations and mechanical properties were identified from quantitative metallography, dilatometric measurement of phase transformations, tensile testing, and nanoindentation hardness testing. Results indicate nitrogen that is not precipitated with Ti or Al (free nitrogen) partitions to austenite (and thus martensite) during typical intercritical annealing treatments, and is mostly contained in Cottrell atmospheres in martensite. Due to the austenite stabilizing effect of nitrogen, the presence of free nitrogen during intercritical annealing leads to a higher austenite fraction in certain conditions. Thus, the presence of free nitrogen in a dual-phase microstructure will lead to an increase in tensile and yield strengths from both an increase in martensite fraction, and an increase in martensite hardness due to solid solution strengthening. Despite the presence

  7. Nitrogen Fixation in Denitrified Marine Waters

    OpenAIRE

    Camila Fernandez; Laura Farías; Osvaldo Ulloa

    2011-01-01

    Nitrogen fixation is an essential process that biologically transforms atmospheric dinitrogen gas to ammonia, therefore compensating for nitrogen losses occurring via denitrification and anammox. Currently, inputs and losses of nitrogen to the ocean resulting from these processes are thought to be spatially separated: nitrogen fixation takes place primarily in open ocean environments (mainly through diazotrophic cyanobacteria), whereas nitrogen losses occur in oxygen-depleted intermediate wat...

  8. Nitrogen and Phosphorus Removal Performance in the Novel Multi-Layered Biological Tricking Filter

    Directory of Open Access Journals (Sweden)

    CUI Ting-ting

    2014-02-01

    Full Text Available Biological trickling filter is one of the main rural sewage treatment technology, but it still has the shortcomings such as lower re-moval efficiency for nitrogen and phosphorus or lower stability. In order to improve the nitrogen and phosphorus removal efficiency of the de-vice and find out its optimum technological conditions, the study took the novel multi-layered biological tricking filter as the device to test the contribution of filter medium, hydraulic loading, recirculation ratio on the treatment of nitrogen and phosphorus removal. The results showed that when the hydraulic loading of 4 m3·m-2·d-1, the recirculation ratio rate of 2∶1 and slag as filter medium were applied, the best effect could be achieved in the filter. The highest mean efficiency of NH4+-N, TN, TP and COD were 87.08%, 57.37%, 66.04% and 80.78%, respectively.The results also indicated that higher recirculation ratio was one of effective paths to improve nitrogen removal efficiency.

  9. Biological Hydrogen Production: Simultaneous Saccharification and Fermentation with Nitrogen and Phosphorus Removal from Wastewater Effluent

    Science.gov (United States)

    2012-03-01

    energy intensive and completely dependent on fossil fuel: CH4 + H20-^CO + 3H2 (1) Hydrogen can also be produced by electrolysis , splitting water into...the WWTP discharge waters using the same biological process as used to generate hydrogen. Two reactor configurations were used, including a...hydrogen and simultaneously capture nitrogen and phosphorus. Two reactor configurations were tested as simultaneous saccharification and fermentation

  10. Effect of Lime Nitrogen on the Transformation of Urea in Soils

    Institute of Scientific and Technical Information of China (English)

    HENIAN-ZU; YUSHEN; 等

    1995-01-01

    Laboratory incubation experiment was conducted to study the effect of lime nitrogen(LN) on transfor-mation of urea-N in three paddy soils.The results showed that LN had an inhibitory effect on urease activity in these soils especially in the first 5 days.and that in the first 20 days of incubation,the amount of NH4+-N derived from urea was lower in the soil with LN than in the soil without LN,While after 30 days the amount of NH4+-N was higher in the mature haplic paddy soil developed on Quaternary red clay (MHPS)with LN than that in the soil without LN.The amount of NH3-N volatilized was decreased in the earlier stage and increased in the later stage of incubation in the MHPS by the addition of LN.

  11. Nitrogen utilization and transformation in red soil fertilized with urea and ryegrass

    Institute of Scientific and Technical Information of China (English)

    WuGang; HeZhen-Li

    1998-01-01

    The influence of fertilization with urea and ryegrass on nitrogen utilization and transformation in red soil has been studied by using 15N tracer method.When urea and ryegrass were applied alone or in combination,the percentage of N uptaken by ryegrass from labelled urea was 3 and 1.7 times that from labelled ryegrass for the application rate of 200mgN.kg-1 and 100mgN.kg-1,respectively;combining application of ryegrass and ureareduced uptake of urea N and increased uptake of ryegrass N by ryegrass plant,but the percentage of N residued in soil increased for urea and decreased for ryegrass.when urea and ryegrass were applied alone,the percentage of N residued in soil from labelled ryegrass was more than 69% while that from labelled urea was less than 25%,and much more ryegrass N was incorporated into humus than urea N.

  12. Transformation of nitrogen dioxide into ozone and prediction of ozone concentrations using multiple linear regression techniques.

    Science.gov (United States)

    Ghazali, Nurul Adyani; Ramli, Nor Azam; Yahaya, Ahmad Shukri; Yusof, Noor Faizah Fitri M D; Sansuddin, Nurulilyana; Al Madhoun, Wesam Ahmed

    2010-06-01

    Analysis and forecasting of air quality parameters are important topics of atmospheric and environmental research today due to the health impact caused by air pollution. This study examines transformation of nitrogen dioxide (NO(2)) into ozone (O(3)) at urban environment using time series plot. Data on the concentration of environmental pollutants and meteorological variables were employed to predict the concentration of O(3) in the atmosphere. Possibility of employing multiple linear regression models as a tool for prediction of O(3) concentration was tested. Results indicated that the presence of NO(2) and sunshine influence the concentration of O(3) in Malaysia. The influence of the previous hour ozone on the next hour concentrations was also demonstrated.

  13. Planetary Biology and Microbial Ecology: Molecular Ecology and the Global Nitrogen cycle

    Science.gov (United States)

    Nealson, Molly Stone (Editor); Nealson, Kenneth H. (Editor)

    1993-01-01

    This report summarizes the results of the Planetary Biology and Molecular Ecology's summer 1991 program, which was held at the Marine Biological Laboratory in Woods Hole, Massachusetts. The purpose of the interdisciplinary PBME program is to integrate, via lectures and laboratory work, the contributions of university and NASA scientists and student interns. The goals of the 1991 program were to examine several aspects of the biogeochemistry of the nitrogen cycle and to teach the application of modern methods of molecular genetics to field studies of organisms. Descriptions of the laboratory projects and protocols and abstracts and references of the lectures are presented.

  14. Nitrogen Chemistry and Coke Transformation of FCC Coked Catalyst during the Regeneration Process

    Science.gov (United States)

    Shi, Junjun; Guan, Jianyu; Guo, Dawei; Zhang, Jiushun; France, Liam John; Wang, Lefu; Li, Xuehui

    2016-01-01

    Regeneration of the coked catalyst is an important process of fluid catalytic cracking (FCC) in petroleum refining, however, this process will emit environmentally harmful gases such as nitrogen and carbon oxides. Transformation of N and C containing compounds in industrial FCC coke under thermal decomposition was investigated via TPD and TPO to examine the evolved gaseous species and TGA, NMR and XPS to analyse the residual coke fraction. Two distinct regions of gas evolution are observed during TPD for the first time, and they arise from decomposition of aliphatic carbons and aromatic carbons. Three types of N species, pyrrolic N, pyridinic N and quaternary N are identified in the FCC coke, the former one is unstable and tends to be decomposed into pyridinic and quaternary N. Mechanisms of NO, CO and CO2 evolution during TPD are proposed and lattice oxygen is suggested to be an important oxygen resource. Regeneration process indicates that coke-C tends to preferentially oxidise compared with coke-N. Hence, new technology for promoting nitrogen-containing compounds conversion will benefit the in-situ reduction of NO by CO during FCC regeneration. PMID:27270486

  15. Nitrogen Chemistry and Coke Transformation of FCC Coked Catalyst during the Regeneration Process.

    Science.gov (United States)

    Shi, Junjun; Guan, Jianyu; Guo, Dawei; Zhang, Jiushun; France, Liam John; Wang, Lefu; Li, Xuehui

    2016-06-08

    Regeneration of the coked catalyst is an important process of fluid catalytic cracking (FCC) in petroleum refining, however, this process will emit environmentally harmful gases such as nitrogen and carbon oxides. Transformation of N and C containing compounds in industrial FCC coke under thermal decomposition was investigated via TPD and TPO to examine the evolved gaseous species and TGA, NMR and XPS to analyse the residual coke fraction. Two distinct regions of gas evolution are observed during TPD for the first time, and they arise from decomposition of aliphatic carbons and aromatic carbons. Three types of N species, pyrrolic N, pyridinic N and quaternary N are identified in the FCC coke, the former one is unstable and tends to be decomposed into pyridinic and quaternary N. Mechanisms of NO, CO and CO2 evolution during TPD are proposed and lattice oxygen is suggested to be an important oxygen resource. Regeneration process indicates that coke-C tends to preferentially oxidise compared with coke-N. Hence, new technology for promoting nitrogen-containing compounds conversion will benefit the in-situ reduction of NO by CO during FCC regeneration.

  16. Structural and phase transformations in Hadfield steel upon frictional loading in liquid nitrogen

    Science.gov (United States)

    Korshunov, L. G.; Sagaradze, V. V.; Chernenko, N. L.

    2016-08-01

    Structural transformations that occur in 110G13 steel (Hadfield) upon sliding friction in liquid nitrogen (-196°C) have been investigated by metallographic, electron-microscopic, and X-ray diffraction methods. The frictional action was performed through the reciprocating sliding of a cylindrical indenter of quenched 110G13 steel over a plate of the studied steel. A like friction pair was immersed into a bath with liquid nitrogen. It has been shown that the Hadfield steel quenched from 1100°C under the given temperature conditions of frictional loading retains the austenitic structure completely. The frictional action forms in a surface layer up to 10 μm thick the nanocrystalline structure with austenite grains 10-50 nm in size and a hardness 6 GPa. Upon subsequent low-temperature friction, the tempering of steel at 400°C (3 h) and at 600°C (5 min and 5 h) brings about the formation of a large amount (tens of vol %) of ɛ (hcp) martensite in steel. The formation of this phase under friction is supposedly a consequence of the reduction in the stacking fault energy of Hadfield steel, which is achieved due to the combined action of the following factors: low-temperature cooling, a decrease in the carbon content in the austenite upon tempering, and the presence of high compressive stresses in the friction-contact zone.

  17. Nitrogen Chemistry and Coke Transformation of FCC Coked Catalyst during the Regeneration Process

    Science.gov (United States)

    Shi, Junjun; Guan, Jianyu; Guo, Dawei; Zhang, Jiushun; France, Liam John; Wang, Lefu; Li, Xuehui

    2016-06-01

    Regeneration of the coked catalyst is an important process of fluid catalytic cracking (FCC) in petroleum refining, however, this process will emit environmentally harmful gases such as nitrogen and carbon oxides. Transformation of N and C containing compounds in industrial FCC coke under thermal decomposition was investigated via TPD and TPO to examine the evolved gaseous species and TGA, NMR and XPS to analyse the residual coke fraction. Two distinct regions of gas evolution are observed during TPD for the first time, and they arise from decomposition of aliphatic carbons and aromatic carbons. Three types of N species, pyrrolic N, pyridinic N and quaternary N are identified in the FCC coke, the former one is unstable and tends to be decomposed into pyridinic and quaternary N. Mechanisms of NO, CO and CO2 evolution during TPD are proposed and lattice oxygen is suggested to be an important oxygen resource. Regeneration process indicates that coke-C tends to preferentially oxidise compared with coke-N. Hence, new technology for promoting nitrogen-containing compounds conversion will benefit the in-situ reduction of NO by CO during FCC regeneration.

  18. Kinetics of post-treatment structural transformations of nitrogen plasma ion immersion implanted polystyrene

    Energy Technology Data Exchange (ETDEWEB)

    Kosobrodova, E., E-mail: elenak@physics.usyd.edu.au; Kondyurin, A.; McKenzie, D.R.; Bilek, M.M.M.

    2013-06-01

    The surface chemistry of a synthetic material in contact with a biological system has a strong influence on the adhesion of proteins to the surface of the material and requires careful consideration in biomedical applications. The structure of plasma immersion ion implantation (PIII) treated polymer and its surface free energy depend on the ion fluence delivered during the treatment and on the time after the PIII treatment. These dependences have been investigated using the example of nitrogen plasma implanted polystyrene (PS). Contact angle measurements, FTIR–ATR spectra and X-ray photoelectron (XPS) spectra were acquired as a function of ion fluence and time after treatment. The results showed a close relationship to the kinetics of free radicals that had been examined in a previous study. The kinetics of oxidation and surface free energy had two stages, one with a characteristic time of several hours and the other with a characteristic time of several days. The concentration of nitrogen-containing groups decreased with time after PIII treatment, partly, due to their release from the PS surface.

  19. Biological nitrogen fixation by alternative nitrogenases in boreal cyanolichens: importance of molybdenum availability and implications for current biological nitrogen fixation estimates.

    Science.gov (United States)

    Darnajoux, Romain; Zhang, Xinning; McRose, Darcy L; Miadlikowska, Jolanta; Lutzoni, François; Kraepiel, Anne M L; Bellenger, Jean-Philippe

    2017-01-01

    Cryptogamic species and their associated cyanobacteria have attracted the attention of biogeochemists because of their critical roles in the nitrogen cycle through symbiotic and asymbiotic biological fixation of nitrogen (BNF). BNF is mediated by the nitrogenase enzyme, which, in its most common form, requires molybdenum at its active site. Molybdenum has been reported as a limiting nutrient for BNF in many ecosystems, including tropical and temperate forests. Recent studies have suggested that alternative nitrogenases, which use vanadium or iron in place of molybdenum at their active site, might play a more prominent role in natural ecosystems than previously recognized. Here, we studied the occurrence of vanadium, the role of molybdenum availability on vanadium acquisition and the contribution of alternative nitrogenases to BNF in the ubiquitous cyanolichen Peltigera aphthosa s.l. We confirmed the use of the alternative vanadium-based nitrogenase in the Nostoc cyanobiont of these lichens and its substantial contribution to BNF in this organism. We also showed that the acquisition of vanadium is strongly regulated by the abundance of molybdenum. These findings show that alternative nitrogenase can no longer be neglected in natural ecosystems, particularly in molybdenum-limited habitats.

  20. Carbon and Nitrogen Transformations in Surface Soils Under Ermans Birch and Dark Coniferous Forests

    Institute of Scientific and Technical Information of China (English)

    DENG Xiao-Wen; HAN Shi-Jie; HU Yan-Ling; ZHOU Yu-Mei

    2009-01-01

    Soil samples were taken from an Ermans birch (Betula ermanii)-dark coniferous forest (Picea jezoensis and Abies nephrolepis) ecotone growing on volcanic ejecta in the northern slopc of Changbai Mountains of Northeast China,to compare soil carbon (C) and nitrogen (N) transformations in the two forests.The soil type is Umbri-Gelic Cambosols in Chinese Soil Taxonomy.Soil samples were incubated aerobically at 20 ℃ and field capacity of 700 g kg-1 over a period of 27 weeks.The amount of soil microbial biomass and net N mineralization were higher in the Ermans birch than the dark coniferous forest (P<0.05),whereas the cumulative C mineralization (as CO2 emission) in the dark coniferous forest exceeded that in the Ermans birch (P<0.05).Release of the cumulative dissolved organic C and dissolved organic N were greater in the Ermans birch than the dark coniferous forest (P<0.05).The results suggested that differences of forest types could result in considerable change in soil C and N transformations.

  1. Effect of Nitrogen Fertilizers on Movement and Transformation of Phosphorus in an Acid Soil

    Institute of Scientific and Technical Information of China (English)

    DU Zhen-Yu; ZHOU Jian-Min; WANG Huo-Yan; DU Chang-Wen; CHEN Xiao-Qin

    2005-01-01

    The effects of two different nitrogen fertilizers (urea and NH4Cl) with monocalcium phosphate (MCP) on the movement and transformation of fertilizer P in soil microsites along with soil pH changes at different distances from the fertilizer application site were studied in an incubation experiment. A highly acidic red soil (Ultisol, pH 4.57) from south China with MCP fertilizer alone or in combination with NH4Cl or urea was added to the surface of soil cylinders and packed in wax blocks. After 7 and 28 days, the extraction and analysis of each 2 mm layer from the interface of the soil and fertilizer showed that added NH4Cl or urea did not change the movement distance of fertilizer P. However, P transformation was significantly affected (P < 0.05). After 7 days, at 0-8 mm distance from the fertilizer site the addition of urea significantly decreased the water-extractable P concentration; however, after 28 days the effect of N addition had disappeared. Also,at limited distances close to the fertilizer site NH4Cl application with MCP significantly increased acid-extractable P and available P, while with the addition of urea they significantly decreased. Compared with application of MCP alone,addition of urea significantly increased soil pH in fertilizer microsites, whereas the addition of NH4Cl significantly decreased soil pH.

  2. Chemical and isotopic evidence of nitrogen transformation in the Mississippi River, 1997-98

    Science.gov (United States)

    Battaglin, William A.; Kendall, Carol; Chang, Cecily C. Y.; Silva, Steven R.; Campbell, D. H.

    2001-05-01

    An Erratum has been published for this article in Hydrological Processes 16(5) 2002, 1129-1130.Nitrate (NO3) and other nutrients discharged by the Mississippi River are suspected of causing a zone of depleted dissolved oxygen (hypoxic zone) in the Gulf of Mexico each summer. The hypoxic zone may have an adverse affect on aquatic life and commercial fisheries. The amount of NO3 delivered by the Mississippi River to the Gulf of Mexico is well documented, but the relative contributions of different sources of NO3, and the magnitude of subsequent in-stream transformations of NO3, are not well understood. Forty-two water samples collected in 1997 and 1998 at eight stations located either on the Mississippi River or its major tributaries were analysed for NO3, total nitrogen (N), atrazine, chloride concentrations and NO3 stable isotopes (15N and 18O). These data are used to assess the magnitude and nature of in-stream N transformation and to determine if the 15N and Thebes, IL. In both Lagrangian sets, mass-balance calculations indicate only a small amount of in-stream N loss. The stable isotope data from the samples suggest that in-stream N assimilation and not denitrification accounts for most of the N loss in the lower Mississippi River during the spring and early summer months. Published in 2001 by John Wiley & Sons, Ltd.

  3. Transformation of Carbon and Nitrogen by Earthworms in the Decomposition Processes of Broad-leaved Litters

    Institute of Scientific and Technical Information of China (English)

    DONG Weihua; YIN Xiuqin

    2007-01-01

    Earthworms are the important constituents in the decayed food web and the main ecological conditioners in the process of decomposition and nutrient mineralization. The transformation of organic carbon (C) and total nitrogen (N) in the broad-leaved litters ingested by earthworms was researched by means of a laboratory experiment. Experimental samples were collected from broad-leaved Korea Pine mixed forest in Liangshui National Natural Reserve (47°10'50"N, 128°53'20"E) in the northeastern Xiao Hinggan Mountains of Northeast China. The contents of organic C and total N in earthworms, leaf litters and earthworm faeces were analyzed. Results show that the organic C content was in the following order: leaf litters>faeces>earthworms, while total N content was contrary to that of the organic C. The organic C contents in the different leaf litters were in the following order: Tilia amurensis>Betula costata>Acer mono, whereas the total N contents in the different leaf litters were: Betula costata>Tilia amurensis>Acer mono. The contents of organic C and total N in the faeces from the different leaf litters were almost consistent with the contents of the leaf litters. After the leaf litters were ingested by earthworms, the organic C, which was transformed to increase earthworms' weights, accounted for 3.90%-13.31% of the total ingestion by earthworms, while that in the earthworm faeces accounted for 6.14%-13.70%. The transformed organic C through the other metabolism (e.g., respiration) of earthworms accounted for 75.04%-89.92%. The ingested organic C by earthworms was mostly used for metabolic activities. The N ingested by earthworms was less than organic C. It is estimated that 37.08% of total N was transformed to increase the earthworm's weight, 19.97% into earthworm faeces and 47.86% for the consumption of the earthworm's activities. The earthworms not only increased the content of organic C and total N in the soil, but also decreased the values of C/N in

  4. EnviroAtlas - Cultivated biological nitrogen fixation in agricultural lands by 12-digit HUC in the Conterminous United States, 2006

    Data.gov (United States)

    U.S. Environmental Protection Agency — This EnviroAtlas dataset contains data on the mean cultivated biological nitrogen fixation (C-BNF) in cultivated crop and hay/pasture lands per 12-digit Hydrologic...

  5. [Transformation characteristics of carbon, nitrogen, phosphorus and sulfur during thermal hydrolysis pretreatment of sludge with high solid content].

    Science.gov (United States)

    Zhuo, Yang; Han, Yun; Cheng, Yao; Peng, Dang-Cong; Li, Yu-You

    2015-03-01

    The transformation characteristics of carbon, nitrogen, phosphorus and sulfur in dewatering sludge from municipal wastewater treatment plant (WWTP) were investigated after thermal hydrolysis pretreatment at 165 degress C for 50 min. The results showed that the hydrolysis efficiency of VSS could reach as high as 43.35%, 54.36% of protein and 65.12% of carbohydrate were transferred to dissolved organics, respectively, and the main component of dissolved organic matter in hydrolysate was dissolved protein (52.18% ), 54.23% of insoluble organic nitrogen was turned into dissolved nitrogen and 22.13% of dissolved nitrogen in hydrolysate was converted to ammonia. The transformation rate of insoluble phosphorus was 30.52%. Dissolved phosphorus was mostly transformed to phosphate (79.84%) as phosphorus-accumulating bacteria cells were crushed. 50.03% of insoluble organic sulfur was hydrolyzed, and little change was detected in sulfide (0.50%). The analysis results of the organic compounds transformation are valuable for treatment of the thermal hydrolysis pretreated sludge with high solid content.

  6. Attenuated radon transform: theory and application in medicine and biology

    Energy Technology Data Exchange (ETDEWEB)

    Gullberg, G.T.

    1979-06-01

    A detailed analysis is given of the properties of the attenuated Radon transform and of how increases in photon attenuation influence the numerical accuracy and computation efficiency of iterative and convolution algorithms used to determine its inversion. The practical applications for this work involve quantitative assessment of the distribution of injected radiopharmaceuticals and radionuclides in man and animals for basic physiological and biochemical studies as well as clinical studies in nuclear medicine. A mathematical structure is developed using function theory and the theory of linear operators on Hilbert spaces which lends itself to better understanding the spectral properties of the attenuated Radon transform. The continuous attenuated Radon transform reduces to a matrix operator for discrete angular and lateral sampling, and the reconstruction problem reduces to a system of linear equations. For the situation of variable attenuation coefficient frequently found in nuclear medicine applications of imaging the heart and chest, the procedure developed in this thesis involves iterative techniques of performing the generalized inverse. For constant attenuation coefficient less than 0.15 cm/sup -1/, convolution methods can reliably reconstruct a 30 cm object with 0.5 cm resolution. However, for high attenuation coefficients or for the situation where there is variable attenuation such as reconstruction of distribution of isotopes in the heart, iterative techniques developed in this thesis give the best results. (ERB)

  7. Microbial transformations of nitrogen, sulfur, and iron dictate vegetation composition in wetlands: a review.

    Science.gov (United States)

    Lamers, Leon P M; van Diggelen, Josepha M H; Op den Camp, Huub J M; Visser, Eric J W; Lucassen, Esther C H E T; Vile, Melanie A; Jetten, Mike S M; Smolders, Alfons J P; Roelofs, Jan G M

    2012-01-01

    The majority of studies on rhizospheric interactions focus on pathogens, mycorrhizal symbiosis, or carbon transformations. Although the biogeochemical transformations of N, S, and Fe have profound effects on vegetation, these effects have received far less attention. This review, meant for microbiologists, biogeochemists, and plant scientists includes a call for interdisciplinary research by providing a number of challenging topics for future ecosystem research. Firstly, all three elements are plant nutrients, and microbial activity significantly changes their availability. Secondly, microbial oxidation with oxygen supplied by radial oxygen loss from roots in wetlands causes acidification, while reduction using alternative electron acceptors leads to generation of alkalinity, affecting pH in the rhizosphere, and hence plant composition. Thirdly, reduced species of all three elements may become phytotoxic. In addition, Fe cycling is tightly linked to that of S and P. As water level fluctuations are very common in wetlands, rapid changes in the availability of oxygen and alternative terminal electron acceptors will result in strong changes in the prevalent microbial redox reactions, with significant effects on plant growth. Depending on geological and hydrological settings, these interacting microbial transformations change the conditions and resource availability for plants, which are both strong drivers of vegetation development and composition by changing relative competitive strengths. Conversely, microbial composition is strongly driven by vegetation composition. Therefore, the combination of microbiological and plant ecological knowledge is essential to understand the biogeochemical and biological key factors driving heterogeneity and total (i.e., microorganisms and vegetation) community composition at different spatial and temporal scales.

  8. Effects of the combination of aeration and biofilm technology on transformation of nitrogen in black-odor river.

    Science.gov (United States)

    Pan, Mei; Zhao, Jun; Zhen, Shucong; Heng, Sheng; Wu, Jie

    2016-01-01

    Excess nitrogen in urban river networks leading to eutrophication has become one of the most urgent environmental problems. Combinations of different aeration and biofilm techniques was designed to remove nitrogen from rivers. In laboratory water tank simulation experiments, we assessed the removal efficiency of nitrogen in both the overlying water and sediments by using the combination of the aeration and biofilm techniques, and then analyzed the transformation of nitrogen during the experiments. Aeration (especially sediment aeration) combined with the biofilms techniques was proved efficient in removing nitrogen from polluted rivers. Results indicated that the combination of sediment aeration and biofilms, with the highest nitrogen removal rate from the overlying water and sediments, was the most effective combined process, which especially inhibited the potential release of nitrogen from sediments by reducing the enzyme activity. It was found that the content of dissolved oxygen in water could be restored on the basis of the application of aeration techniques ahead, and the biofilm technique would be effective in purifying water in black-odor rivers.

  9. Transformations of Nitrogen from Secondary Treated Wastewater when Infiltrated in Managed Aquifer Recharge Schemes

    Science.gov (United States)

    Silver, Matthew; Wefer-Roehl, Annette; Kübeck, Christine; Schüth, Christoph

    2016-04-01

    The EU FP7 project MARSOL seeks to address water scarcity challenges in arid regions, where managed aquifer recharge (MAR) is an upcoming technology to recharge depleted aquifers using alternative water sources. Within this framework, we conduct column experiments to investigate transformations of nitrogen species when secondary treated wastewater (STWW) is infiltrated through two natural soils being considered for managed aquifer recharge. The soils vary considerably in organic matter content, with total organic matter determined by loss on ignition of 6.8 and 2.9 percent by mass for Soil 1 and Soil 2, respectively. Ammonium (NH4+) concentrations as high as 8.6 mg/L have been measured in pore water samples from Soil #1, indicating that ammonium could be a contaminant of concern in MAR applications using STWW, with consideration of the EU limit of 0.5 mg/L for NH4+. The two forms of nitrogen with the highest concentrations in the secondary treated wastewater are nitrate (NO3-) and dissolved organic nitrogen (DON). In water samples taken from the soil columns, a mass balance of measured ions shows a deficit of nitrogen in ionic form in the upper to middle depths of the soil, suggesting the presence of unmeasured species. These are likely nitrous oxide or dinitrogen gas, which would signify that denitrification is occurring. Measurements of N2O from water samples will verify its presence and spatial variation. The ammonium concentrations increase slowly in the upper parts of the soil but then increase more sharply at greater depth, after NO3- is depleted, suggesting that DON is the source of the produced NH4+. The production of NH4+ is presumed to be facilitated microbiologically. It is hypothesized that at higher organic carbon to total nitrogen (C:N) ratios, more NH4+ will be formed. To test this, in the experiments with Soil #2, three different inflow waters are used, listed in order of decreasing C:N ratio: STWW, STWW with NO3- added to a concentration of 80 mg

  10. Frequent fire alters nitrogen transformations in ponderosa pine stands of the inland northwest.

    Science.gov (United States)

    DeLuca, Thomas H; Sala, Anna

    2006-10-01

    Recurrent, low-severity fire in ponderosa pine (Pinus ponderosa)/interior Douglas-fir (Pseudotsuga menziesii var. glauca) forests is thought to have directly influenced nitrogen (N) cycling and availability. However, no studies to date have investigated the influence of natural fire intervals on soil processes in undisturbed forests, thereby limiting our ability to understand ecological processes and successional dynamics in this important ecosystem of the Rocky Mountain West. Here, we tested the standing hypothesis that recurrent fire in ponderosa pine/Douglas-fir forests of the Inland Northwest decreases total soil N, but increases N turnover and nutrient availability. We compared soils in stands unburned over the past 69-130 years vs. stands exposed to two or more fires over the last 130 years at seven distinct locations in two wilderness areas. Mineral soil samples were collected from each of the seven sites in June and July of 2003 and analyzed for pH, total C and N, potentially mineralizable N (PMN), and extractable NH4+, NO3-, PO4(-3), Ca+2, Mg+2, and K+. Nitrogen transformations were assessed at five sites by installing ionic resin capsules in the mineral soil in August of 2003 and by conducting laboratory assays of nitrification potential and net nitrification in aerobic incubations. Total N and PMN decreased in stands subjected to multiple fires. This loss of total N and labile N was not reflected in concentrations of extractable NH4+ and NO3-. Rather, multiple fires caused an increase in NO3 sorbed on ionic resins, nitrification potential, and net nitrification in spite of the burned stands not having been exposed to fire for at least 12-17 years. Charcoal collected from a recent fire site and added to unburned soils increased nitrification potential, suggesting that the decrease of charcoal in the absence of fire may play an important role in N transformations in fire-dependent ecosystems in the long term. Interestingly, we found no consistent effect of

  11. Global terrestrial carbon and nitrogen cycling insensitive to estimates of biological N fixation

    Science.gov (United States)

    Steinkamp, J.; Weber, B.; Werner, C.; Hickler, T.

    2015-12-01

    Dinitrogen (N2) is the most abundant molecule in the atmosphere and incorporated in other molecules an essential nutrient for life on earth. However, only few natural processes can initiate a reaction of N2. These natural processes are fire, lightning and biological nitrogen fixation (BNF) with BNF being the largest source. In the course of the last century humans have outperformed the natural processes of nitrogen fixation by the production of fertilizer. Industrial and other human emission of reactive nitrogen, as well as fire and lightning lead to a deposition of 63 Tg (N) per year. This is twice the amount of BNF estimated by the default setup of the dynamic global vegetation model LPJ-GUESS (30 Tg), which is a conservative approach. We use different methods and parameterizations for BNF in LPJ-GUESS: 1.) varying total annual amount; 2.) annual evenly distributed and daily calculated fixation rates; 3.) an improved dataset of BNF by cryptogamic covers (free-living N-fixers). With this setup BNF is ranging from 30 Tg to 60 Tg. We assess the impact of BNF on carbon storage and grand primary production (GPP) of the natural vegetation. These results are compared to and evaluated against available independent datasets. We do not see major differences in the productivity and carbon stocks with these BNF estimates, suggesting that natural vegetation is insensitive to BNF on a global scale and the vegetation can compensate for the different nitrogen availabilities. Current deposition of nitrogen compounds and internal cycling through mineralization and uptake is sufficient for natural vegetation productivity. However, due to the coarse model grid and spatial heterogeneity in the real world this conclusion does not exclude the existence of habitats constrained by BNF.

  12. Automatic Biological Cell Counting Using a Modified Gradient Hough Transform.

    Science.gov (United States)

    Denimal, Emmanuel; Marin, Ambroise; Guyot, Stéphane; Journaux, Ludovic; Molin, Paul

    2017-02-01

    We present a computational method for pseudo-circular object detection and quantitative characterization in digital images, using the gradient accumulation matrix as a basic tool. This Gradient Accumulation Transform (GAT) was first introduced in 1992 by Kierkegaard and recently used by Kaytanli & Valentine. In the present article, we modify the approach by using the phase coding studied by Cicconet, and by adding a "local contributor list" (LCL) as well as a "used contributor matrix" (UCM), which allow for accurate peak detection and exploitation. These changes help make the GAT algorithm a robust and precise method to automatically detect pseudo-circular objects in a microscopic image. We then present an application of the method to cell counting in microbiological images.

  13. Simultaneous carbon and nitrogen removal in anoxic-aerobic circulating fluidized bed biological reactor (CFBBR).

    Science.gov (United States)

    Cui, Y; Nakhla, G; Zhu, J; Patel, A

    2004-06-01

    Biological nutrient removal (BNR) in municipal wastewater treatment to remove carbonaceous substrates and nutrients, has recently become increasingly popular worldwide due to increasingly stringent regulations. Biological fluidized bed (BFB) technology, which could be potentially used for BNR, can provide some advantages such as high efficiency and a compact structure. This work shows the results of simultaneous elimination of organic carbon and nitrogen using a circulating fluidized bed biological reactor (CFBBR, which has been developed recently for chemical engineering processes. The CFBBR has two fluidized beds, running as anoxic and aerobic processes to accomplish simultaneous nitrification and denitrification, with continuous liquid recirculation through the anoxic bed and the aerobic bed. Soluble COD concentrations in the effluent ranging from 4 to 20 mg l(-1) were obtained at varying COD loading rates; ammonia nitrogen removal efficiencies averaged in excess of 99% at a minimum total hydraulic retention time (HRT) of 2.0 hours over a temperature range of 25 degrees C to 28 degrees C. Effluent nitrate nitrogen concentration of less than 5 mg l(-1) was achieved by increasing effluent recycle rate. No nitrite accumulation was observed either in the anoxic bed or in the aerobic bed. The system was able to treat grit chamber effluent wastewater at a HRT of 2.0 hours while achieving average effluent BOD, COD, NH3-N, TKN, nitrates, total phosphate, TSS and VSS concentrations of 10 mg l(-1), 18 mg l(-1), 1.3 mg l(-1), 1.5 mg l(-1), 7 mg l(-1), 2.0 mg l(-1), 10 mg l(-1) and 8 mg l(-1) respectively. The CFBBR appears to be not only an excellent alternative for conventional activated sludge type BNR technologies but also capable of processing much higher loadings that are suitable for industrial applications.

  14. Combined Pre-Precipitation, Biological Sludge Hydrolysis and Nitrogen Reduction - A Pilot Demonstration of Integrated Nutrient Removal

    DEFF Research Database (Denmark)

    Kristensen, G. H.; Jørgensen, P. E.; Strube, R.

    1992-01-01

    A pilot study was performed to investigate advanced wastewater treatment by pre-precipitation in combination with biological nitrogen removal supported by biological sludge hydrolysis. The influent wastewater was pretreated by addition of a pre-polymerized aluminum salt, followed by flocculation...... solubilization was 10-13% of the suspended COD. The liquid phase of the hydrolyzed sludge, the hydrolysate, was separated from the suspended fraction by centrifugation and added to the biological nitrogen removal stage to support denitrification. The hydrolysate COD consisted mainly of volatile fatty acids......, resulting in high denitrification rates. Nitrogen reduction was performed based on the Bio-Denitro principle in an activated sludge system. Nitrogen was reduced from 45 mg/l to 9 mg/l and phosphorus was reduced from 11 mg/l to 0.5 mg/l. The sludge yield was low, approx. 0.3-0.4 gCOD/gCOD removed...

  15. Biological soil crusts emit large amounts of NO and HONO affecting the nitrogen cycle in drylands

    Science.gov (United States)

    Tamm, Alexandra; Wu, Dianming; Ruckteschler, Nina; Rodríguez-Caballero, Emilio; Steinkamp, Jörg; Meusel, Hannah; Elbert, Wolfgang; Behrendt, Thomas; Sörgel, Matthias; Cheng, Yafang; Crutzen, Paul J.; Su, Hang; Pöschl, Ulrich; Weber, Bettina

    2016-04-01

    Dryland systems currently cover ˜40% of the world's land surface and are still expanding as a consequence of human impact and global change. In contrast to that, information on their role in global biochemical processes is limited, probably induced by the presumption that their sparse vegetation cover plays a negligible role in global balances. However, spaces between the sparse shrubs are not bare, but soils are mostly covered by biological soil crusts (biocrusts). These biocrust communities belong to the oldest life forms, resulting from an assembly between soil particles and cyanobacteria, lichens, bryophytes, and algae plus heterotrophic organisms in varying proportions. Depending on the dominating organism group, cyanobacteria-, lichen-, and bryophyte-dominated biocrusts are distinguished. Besides their ability to restrict soil erosion they fix atmospheric carbon and nitrogen, and by doing this they serve as a nutrient source in strongly depleted dryland ecosystems. In this study we show that a fraction of the nitrogen fixed by biocrusts is metabolized and subsequently returned to the atmosphere in the form of nitric oxide (NO) and nitrous acid (HONO). These gases affect the radical formation and oxidizing capacity within the troposphere, thus being of particular interest to atmospheric chemistry. Laboratory measurements using dynamic chamber systems showed that dark cyanobacteria-dominated crusts emitted the largest amounts of NO and HONO, being ˜20 times higher than trace gas fluxes of nearby bare soil. We showed that these nitrogen emissions have a biogenic origin, as emissions of formerly strongly emitting samples almost completely ceased after sterilization. By combining laboratory, field, and satellite measurement data we made a best estimate of global annual emissions amounting to ˜1.1 Tg of NO-N and ˜0.6 Tg of HONO-N from biocrusts. This sum of 1.7 Tg of reactive nitrogen emissions equals ˜20% of the soil release under natural vegetation according

  16. Effect of Rare Earths on Fractionation and Transformation of Soil Available Nitrogen

    Institute of Scientific and Technical Information of China (English)

    丁士明; 梁涛; 张自立; 孙琴; 张朝生

    2003-01-01

    The effect of rare earths (RE) on fractionation and transformation of available nitrogen (N) in a yellow cinnamon soil was studied with soil cultivation. The results show that under the dry condition, when the extraneous RE are added to the soil, both concentrations of soil ammonium N and hydrolysable N increase, and the concentrations of soil nitric N decrease. The concentrations of soil available N increase with the increase of RE concentrations in soils when the RE concentrations are low, but it decreases with the increase of high RE concentrations in soils. The NOEC (no observed effect concentration) of the extraneous RE to available N in the soils is 443.8 mg*kg-1. Under the inundated condition, low RE concentrations in soil has no significant effect on soil ammonium N and hydrolysable N. However, when the soil RE concentrations are high, both of them decrease with the increase of RE concentrations. The NOEC of the extraneous RE to soil ammonium N and hydrolysable N are 171.2 and 256.9 mg*kg-1, respectively.

  17. Artificial photosynthesis combines biology with technology for sustainable energy transformation

    Science.gov (United States)

    Moore, Thomas A.; Moore, Ana L.; Gust, Devens

    2013-03-01

    Photosynthesis supports the biosphere. Currently, human activity appropriates about one fourth of terrestrial photosynthetic net primary production (NPP) to support our GDP and nutrition. The cost to Earth systems of "our cut" of NPP is thought to be rapidly driving several Earth systems outside of bounds that were established on the geological time scale. Even with a fundamental realignment of human priorities, changing the unsustainable trajectory of the anthropocene will require reengineering photosynthesis to more efficiently meet human needs. Artificial photosynthetic systems are envisioned that can both supply renewable fuels and serve as platforms for exploring redesign strategies for photosynthesis. These strategies can be used in the nascent field of synthetic biology to make vast, much needed improvements in the biomass production efficiency of photosynthesis.

  18. Nitrogen Transformations and Removal Mechanisms in Algal and Duckweed Waste Stabilisation Ponds

    NARCIS (Netherlands)

    Zimmo, O.

    2003-01-01

    Effective treatment of nitrogen containing wastewater is required to prevent eutrophication and groundwater pollution. This thesis shows that effective treatment may be combined with substantial nitrogen recovery in duckweed-based waste stabilisation ponds. In these ponds nitrogen is absorbed by rap

  19. Transformação genética e aplicação de glifosato na microbiota do solo, fixação biológica de nitrogênio, qualidade e segurança de grãos de soja geneticamente modificada Genetic transformation and the use glyphosate on soil microbial, biological nitrogen fixation, quality and safety of genetically modified soybean

    Directory of Open Access Journals (Sweden)

    Giani Mariza Bärwald Böhm

    2010-02-01

    safety of GM RR soybean with or without glyphosate application were collected and investigated. In general, the researches investigated showed some similar characteristics: a few variables were studied; b simulations in green house or in vitro are used to infer possible response on the field. Although scarce, the researches denoted that the genetic transformation did not affect soil microorganisms, biological nitrogen fixation and composition of grains. The factor which could affect these variables is the glyphosate application in weed control, thus the risk of damage to the environment and the safety of products derived from this raw materialare due to the use of the herbicide during cultivation, and not to the genetic transformation. Key words: Transgenic soybean, soil microorganisms, herbicides residue, isoflavones.

  20. Soybean seed treatment with nickel improves biological nitrogen fixation and urease activity

    Directory of Open Access Journals (Sweden)

    José eLavres Junior

    2016-05-01

    Full Text Available Nickel (Ni is an essential micronutrient required for plants’ metabolism due to its role as a structural component of urease and hydrogenase, which in turn perform nitrogen (N metabolism in many legume species. Seed treatment with cobalt, molybdenum and Bradyrhizobium strains has been widely practiced to improve crops. Additionally, seed treatment together with Ni fertilization of soybean might improve the efficiency of biological nitrogen fixation (BNF, boosting grain dry matter yield and N content. The objective of this study was to evaluate the effect of soybean seed treatment with Ni rates (0, 45, 90,135, 180, 360 and 540 mg kg-1 on biological nitrogen fixation (BNF, directly by the 15N natural abundance method (δ15N‰ and by measurement of urease [E.C. 3.5.1.5] activity, as well as indirectly by nitrogenase (N-ase activity [E.C. 1.18.6.1]. Soybean plants (cultivar BMX Potência RR were grown in a sandy soil up to the R7 developmental stage (grain maturity, at which point the nutrient content in the leaves, chlorophyll content, urease and N-ase activities, Ni and N content in the grains, nodulation (at R1 - flowering stage, as well as the contribution of biological nitrogen fixation (δ15N ‰, were evaluated. The proportion of N derived from N2 fixation varied from 77 to 99% using the natural 15N abundance method and non-nodulating Panicum miliaceum and Phalaris canariensis as references. A Ni rate of 45 mg kg-1 increased BNF by 12% compared to the control. The increased N uptake in the grains was closely correlated with chlorophyll content in the leaves, urease and N-ase activities, as well as with nodulation. Grain dry matter yield and aerial part dry matter yield increased, respectively, by 84% and 51% in relation to the control plants at 45 mg kg-1 Ni via seed treatment. Despite, Ni concentration was increased with Ni-seed treatment, Ni rates higher than 135 mg kg-1 promoted negative effects on plant growth and yield. In these

  1. Review of biological transformations of anionic synthetic detergents in natural waters

    Energy Technology Data Exchange (ETDEWEB)

    Irkha, N.I.; Priiman, R.A.

    1979-01-01

    A review of biological transformations of anionic synthetic detergents in natural waters, based on data from studies of detergent transformation under natural and model conditions, covers the biodegradation of alkyl sulfates; colorimetric determination of such detergents; carbon dioxide evolution methods; intermediate products of decomposition; monitoring of biodegradation by luminous fluxes; the role of microorganisms in biodegradation; toxicity; and the rate of self-purification of natural water bodies from such detergents.

  2. Effects of Intercropping on Biological Yield, Percentage of Nitrogen and Morphological Characteristics of Coriander and Fenugreek

    Directory of Open Access Journals (Sweden)

    R. Bigonah

    2014-12-01

    Full Text Available In order to study the intercropping arrangements of coriander (Coriandrum sativum L. and fenugreek (Trigonella foenum-graecum L., a field experiment was conducted during growing season of 2010 at Agriculture Research Station, College of Agriculture, Ferdowsi University of Mashhad, Iran. A randomized complete block design with three replications was used. Treatments included: mono-crop of fenugreek (A, %25 of optimum density of coriander + %175 of optimum density of fenugreek (B, %50 of optimum density of coriander + %150 of optimum density of fenugreek (C, %75 of optimum density of coriander + %125 of optimum density of fenugreek (D, %100 of optimum density of coriander + %100 of optimum density of fenugreek (E, mono-crop of coriander (F, %125 of optimum density of coriander + %75 of optimum density of fenugreek (G, %150 of optimum density of coriander + %50 of optimum density of fenugreek (H, %175 of optimum density of coriander + %25 of optimum density of fenugreek (I. Biological yield harvested in coriander at %5 flowering stage and in fenugreek at %20 flowering stage. The result showed that B treatment had highest plant height and biological yield of fenugreek, highest total land equivalent ratio and also B treatment had lowest essential oil contents of leaf, essential oil yield and biological yield of coriander. I treatment had lowest biological yield of fenugreek and it had highest essential oil contents of leaf, essential oil yield and plant height in coriander. Also A and E treatments had highest percent of nitrogen of biomass in fenugreek and coriander, respectively.

  3. Review of inorganic nitrogen transformations and effect of global climate change on inorganic nitrogen cycling in ocean ecosystems

    Science.gov (United States)

    Kim, Haryun

    2016-03-01

    Inorganic N transformations (nitrification, anaerobic ammonium oxidation, denitrification, and dissimilatory nitrate reduction to ammonium) are regulated by various biogeochemical factors linked either by the supply of electron acceptors and donors or by competition for electron acceptors. This review considers both the microbial community related to each process and the technical methods used to measure each process rate. With this background knowledge, this article summarizes how global climate change through increased pCO2, ocean acidification, deoxygenation and anthropogenic N deposition will alter oceanic N cycling, and finally emphasizes the need for comprehensive research on inorganic N transformation in marine ecosystems.

  4. INFLUENCE OF TECHNOGENIC LANDSCAPES RECULTIVATION ON FUNCTIONING OF SOIL MICROORGANISMS COMMUNITIES WHICH TAKE PART IN TRANSFORMATION OF NITROGEN COMPOUNDS

    Directory of Open Access Journals (Sweden)

    Syshchykova Oksana Vitalyevna

    2014-04-01

    Full Text Available It is established that mining recultivation of tailings dams slimes promotes restoration of numerical structure of soil microorganisms community which take part in processes of nitrogen compounds transformation. The certificate of that is number restoration of the organotrophic bacteria of a nitrogen cycle to 0.3 million CFU/g of soil and increase by 2-3 times of streptomycetes quantity in blankets. The received results of quantitative structure of the microorganisms which are taking part in processes of nitrogen mineral compounds transformation in the chernozem usual allow to claim that in blankets the number of microorganisms makes 3.89 and 2.33 million CFU/g soil. It should be noted that the best conditions for microflora development are formed on slime with drawing 50 cm of loess-like loam and 30 cm of a fertile layer. The microorganism quantity on the specified monitoring area increases by 3-4 times in the soil of a fertile layer and by 1.3-1.6 times in loess-like loam in comparison with slime without recultivation. Increase of microbiological processes intensity, extremely important, considering strengthening of ecosystems self-regulation functions. It is established high level of microbiological transformation of organic substance, the indicator is made 7.3-11.1 in the edatopes of the recultivated slimes. Increasing indicators of microbiological transformation and mineralization of organic compounds in the technozems confirm restoration of a slimes biogenity at carrying out of recultivation that promotes an intensification of mineralization processes and assimilation by plants nitrogen compounds in the soil.

  5. Enhanced root exudation stimulates soil nitrogen transformations in a subalpine coniferous forest under experimental warming.

    Science.gov (United States)

    Yin, Huajun; Li, Yufei; Xiao, Juan; Xu, Zhenfeng; Cheng, Xinyin; Liu, Qing

    2013-07-01

    Despite the perceived importance of exudation to forest ecosystem function, few studies have attempted to examine the effects of elevated temperature and nutrition availability on the rates of root exudation and associated microbial processes. In this study, we performed an experiment in which in situ exudates were collected from Picea asperata seedlings that were transplanted in disturbed soils exposed to two levels of temperature (ambient temperature and infrared heater warming) and two nitrogen levels (unfertilized and 25 g N m(-2)  a(-1) ). Here, we show that the trees exposed to an elevated temperature increased their exudation rates I (μg C g(-1) root biomass h(-1) ), II (μg C cm(-1)  root length h(-1) ) and III (μg C cm(-2)  root area h(-1) ) in the unfertilized plots. The altered morphological and physiological traits of the roots exposed to experimental warming could be responsible for this variation in root exudation. Moreover, these increases in root-derived C were positively correlated with the microbial release of extracellular enzymes involved in the breakdown of organic N (R(2)  = 0.790; P = 0.038), which was coupled with stimulated microbial activity and accelerated N transformations in the unfertilized soils. In contrast, the trees exposed to both experimental warming and N fertilization did not show increased exudation rates or soil enzyme activity, indicating that the stimulatory effects of experimental warming on root exudation depend on soil fertility. Collectively, our results provide preliminary evidence that an increase in the release of root exudates into the soil may be an important physiological adjustment by which the sustained growth responses of plants to experimental warming may be maintained via enhanced soil microbial activity and soil N transformation. Accordingly, the underlying mechanisms by which plant root-microbe interactions influence soil organic matter decomposition and N cycling should be incorporated

  6. Role of plants in nitrogen and sulfur transformations in floating hydroponic root mats: A comparison of two helophytes.

    Science.gov (United States)

    Saad, Rania A B; Kuschk, Peter; Wiessner, Arndt; Kappelmeyer, Uwe; Müller, Jochen A; Köser, Heinz

    2016-10-01

    Knowledge about the roles helophytes play in constructed wetlands (CWs) is limited, especially regarding their provision of organic rhizodeposits. Here, transformations of inorganic nitrogen and sulfur were monitored in a CW variety, floating hydroponic root mat (FHRM), treating synthetic wastewater containing low concentration of organic carbon. Two helophytes, Phragmites australis and Juncus effusus, were compared in duplicates. Striking differences were found between the FHRM of the two helophytes. Whereas ammonium was removed in all FHRMs to below detection level, total nitrogen of 1.15 ± 0.4 g m(-2) d(-1) was removed completely only in P. australis systems. The mats with J. effusus displayed effective nitrification but incomplete denitrification as 77% of the removed ammonium-nitrogen accumulated as nitrate. Furthermore, the P. australis treatment units showed on average 3 times higher sulfate-S removal rates (1.1 ± 0.45 g m(-2) d(-1)) than the systems planted with J. effusus (0.37 ± 0.29 g m(-2) d(-1)). Since the influent organic carbon was below the stoichiometric requirement for the observed N and S transformation processes, helophytes' organic rhizodeposits apparently contributed to these transformations, while P. australis provided about 6 times higher bioavailable organic rhizodeposits than J. effusus.

  7. Biological nitrogen fixation and nutrient release from litter of the guachapele leguminous tree under pure and mixed plantation with eucalyptus.

    OpenAIRE

    Fabiano de Carvalho Balieiro; Bruno José Rodrigues Alves; Marcos Gervásio Pereira; Sérgio Miana de Faria; Avílio Antônio Franco; Campello,Eduardo F.C.

    2008-01-01

    Pseudosamanea guachapele (guachapele), a nitrogen fixing leguminous tree, is an alternative for mixed forest plantations in the tropics. As little information is available for guachapele (Mimosoideae) in mixed plantation with eucalyptus considering the Brazilian edaphoclimatic conditions, an experiment was carried out to evaluate the contribution of biological nitrogen fixation to guachapele and leaf litter decomposition rates and nutrient release of eucalyptus and guachapele residues (pure a...

  8. Spatially robust estimates of biological nitrogen (N) fixation imply substantial human alteration of the tropical N cycle

    OpenAIRE

    Sullivan, Benjamin W.; Smith, W. Kolby; Alan R. Townsend; Nasto, Megan K.; Sasha C. Reed; Chazdon, Robin L; Cleveland, Cory C

    2014-01-01

    Biological nitrogen fixation (BNF) is the largest natural source of new nitrogen (N) to terrestrial ecosystems. Tropical forest ecosystems are a putative global hotspot of BNF, but direct, spatially explicit measurements in the biome are virtually nonexistent. Nonetheless, robust estimates of tropical forest BNF are critical for understanding how these important ecosystems may respond to global change and assessing human perturbations to the N cycle. Here, we introduce a spatial sampling meth...

  9. Enhanced nitrogen removal in a wastewater treatment process characterized by carbon source manipulation with biological adsorption and sludge hydrolysis.

    Science.gov (United States)

    Liu, Hongbo; Zhao, Fang; Mao, Boyang; Wen, Xianghua

    2012-06-01

    An innovative adsorption/nitrification/denitrification/sludge-hydrolysis wastewater treatment process (ENRS) characterized by carbon source manipulation with a biological adsorption unit and a sludge hydrolysis unit was developed to enhance nitrogen removal and reduce sludge production for municipal wastewater treatment. The system presented good performance in pollutants removal, yielding the effluent with average COD, NH(4)(+)-N, TN and TP of 48.5, 0.6, 13.2 and 1.0 mg/L, respectively. Sixty percent of the total carbon source in the influent was concentrated and separated by the quick adsorption of activated sludge, providing the possibilities of reusing waste carbon source in the denitrification tank and accumulating nitrobacteria in the nitrification tank. Low temperature of 6-15 °C and high hydraulic loading rate of 3.0-15.0 m(3)/d did not affect NH(4)(+)-N removal performance, yielding the NH(4)(+)-N of lower 1.0 mg/L in the effluent. Furthermore, 50% of the residual sludge in the ENRS system could be transformed into soluble COD (SCOD) by alkaline thermal hydrolysis with temperature of 60 °C and pH of 11, and the hydrolyzed carbon could completely substitute methanol as a good quality carbon to support high efficient denitrification.

  10. Inorganic sulfur-nitrogen compounds: from gunpowder chemistry to the forefront of biological signaling.

    Science.gov (United States)

    Cortese-Krott, Miriam M; Butler, Anthony R; Woollins, J Derek; Feelisch, Martin

    2016-04-14

    The reactions between inorganic sulfur and nitrogen-bearing compounds to form S-N containing species have a long history and, besides assuming importance in industrial synthetic processes, are of relevance to microbial metabolism; waste water treatment; aquatic, soil and atmospheric chemistry; and combustion processes. The recent discovery that hydrogen sulfide and nitric oxide exert often similar, sometimes mutually dependent effects in a variety of biological systems, and that the chemical interaction of these two species leads to formation of S-N compounds brought this chemistry to the attention of physiologists, biochemists and physicians. We here provide a perspective about the potential role of S-N compounds in biological signaling and briefly review their chemical properties and bioactivities in the context of the chronology of their discovery. Studies of the biological role of NO revealed why its chemistry is ideally suited for the tasks Nature has chosen for it; realising how the distinctive properties of sulfur can enrich this bioactivity does much to revive 'die Freude am experimentellen Spiel' of the pioneers in this field.

  11. Integrating Geochemical Reactions with a Particle-Tracking Approach to Simulate Nitrogen Transport and Transformation in Aquifers

    Science.gov (United States)

    Cui, Z.; Welty, C.; Maxwell, R. M.

    2011-12-01

    Lagrangian, particle-tracking models are commonly used to simulate solute advection and dispersion in aquifers. They are computationally efficient and suffer from much less numerical dispersion than grid-based techniques, especially in heterogeneous and advectively-dominated systems. Although particle-tracking models are capable of simulating geochemical reactions, these reactions are often simplified to first-order decay and/or linear, first-order kinetics. Nitrogen transport and transformation in aquifers involves both biodegradation and higher-order geochemical reactions. In order to take advantage of the particle-tracking approach, we have enhanced an existing particle-tracking code SLIM-FAST, to simulate nitrogen transport and transformation in aquifers. The approach we are taking is a hybrid one: the reactive multispecies transport process is operator split into two steps: (1) the physical movement of the particles including the attachment/detachment to solid surfaces, which is modeled by a Lagrangian random-walk algorithm; and (2) multispecies reactions including biodegradation are modeled by coupling multiple Monod equations with other geochemical reactions. The coupled reaction system is solved by an ordinary differential equation solver. In order to solve the coupled system of equations, after step 1, the particles are converted to grid-based concentrations based on the mass and position of the particles, and after step 2 the newly calculated concentration values are mapped back to particles. The enhanced particle-tracking code is capable of simulating subsurface nitrogen transport and transformation in a three-dimensional domain with variably saturated conditions. Potential application of the enhanced code is to simulate subsurface nitrogen loading to the Chesapeake Bay and its tributaries. Implementation details, verification results of the enhanced code with one-dimensional analytical solutions and other existing numerical models will be presented in

  12. Advances in wastewater nitrogen removal by biological processes: state of the art review

    Directory of Open Access Journals (Sweden)

    Andrea G. Capodaglio

    2016-04-01

    Full Text Available The paper summarizes the state-of-the-art of the most recent advances in biological nitrogen removal, including process design criteria and technological innovations. With reference to the Modified Ludzck Ettinger (MLE process (pre-denitrification and nitrification in the activated sludge process, the most common nitrogen removal process used nowadays, a new design equation for the denitrification reactor based on specific denitrification rate (SDNR has been proposed. In addition, factors influencing SDNR (DO in the anoxic reactor; hydrodynamic behavior are analyzed, and technological solutions are proposed. Concerning technological advances, the paper presents a summary of various “deammonification” processes, better known by their patent names like ANAMMOX®, DEMON®, CANON®, ANITA® and others. These processes have already found applications in the treatment of high-strength wastewater such as digested sludge liquor and landfill leachate. Among other emerging denitrification technologies, consideration is given to the Membrane Biofilm Reactors (MBfRs that can be operated both in oxidation and reduction mode.

  13. Using synthetic biology to distinguish and overcome regulatory and functional barriers related to nitrogen fixation.

    Directory of Open Access Journals (Sweden)

    Xia Wang

    Full Text Available Biological nitrogen fixation is a complex process requiring multiple genes working in concert. To date, the Klebsiella pneumoniae nif gene cluster, divided into seven operons, is one of the most studied systems. Its nitrogen fixation capacity is subject to complex cascade regulation and physiological limitations. In this report, the entire K. pneumoniae nif gene cluster was reassembled as operon-based BioBrick parts in Escherichia coli. It provided ~100% activity of native K. pneumoniae system. Based on the expression levels of these BioBrick parts, a T7 RNA polymerase-LacI expression system was used to replace the σ(54-dependent promoters located upstream of nif operons. Expression patterns of nif operons were critical for the maximum activity of the recombinant system. By mimicking these expression levels with variable-strength T7-dependent promoters, ~42% of the nitrogenase activity of the σ(54-dependent nif system was achieved in E. coli. When the newly constructed T7-dependent nif system was challenged with different genetic and physiological conditions, it bypassed the original complex regulatory circuits, with minor physiological limitations. Therefore, we have successfully replaced the nif regulatory elements with a simple expression system that may provide the first step for further research of introducing nif genes into eukaryotic organelles, which has considerable potentials in agro-biotechnology.

  14. Effect of salinity on N₂O production during shortcut biological nitrogen removal from landfill leachate.

    Science.gov (United States)

    Liu, Mu; Liu, Tiantian; Peng, Yongzhen; Wang, Shuying; Xiao, Han

    2014-05-01

    Three identical SBR adapted to different salinity were applied to investigate the characteristics of the treatment performance and N2O production [Formula: see text] during shortcut biological nitrogen removal from landfill leachate under various operating parameters. Increase of salinity might deteriorate the activity of the microorganisms leading to the increase of [Formula: see text] , however, the system could be gradually adapted to the inhibition and alleviate the detrimental effect to some extent. The system acclimated to high salinity provided better performance under high salinity shock and a lower possibility of [Formula: see text] , while a sudden decrease in salinity can cause a temporary increase in [Formula: see text] . High salinity strengthened the influence of high ammonia nitrogen concentration and low DO concentration on [Formula: see text] while the strengthening effect was unconspicuous at high DO concentration. The anoxic phase did not produce a significant amount of N2O even at the lowest C/N ratio of 0.5 and was less susceptible to salinity. Characterization of the biomass composition using fluorescence in situ hybridization analysis confirmed that the relative proportion of Nitrosomonas europaea was increased with the increase of the salinity, which may be an important factor for the strengthening effect of salinity on [Formula: see text] .

  15. History on the biological nitrogen fixation research in graminaceous plants: special emphasis on the Brazilian experience.

    Science.gov (United States)

    Baldani, José I; Baldani, Vera L D

    2005-09-01

    This review covers the history on Biological Nitrogen Fixation (BNF) in Graminaceous plants grown in Brazil, and describes research progress made over the last 40 years, most of which was coordinated by Johanna Döbereiner. One notable accomplishment during this period was the discovery of several nitrogen-fixing bacteria such as the rhizospheric (Beijerinckia fluminensis and Azotobacter paspali), associative (Azospirillum lipoferum, A. brasilense, A. amazonense) and the endophytic (Herbaspirillum seropedicae, H. rubrisubalbicans, Gluconacetobacter diazotrophicus, Burkholderia brasilensis and B. tropica). The role of these diazotrophs in association with grasses, mainly with cereal plants, has been studied and a lot of progress has been achieved in the ecological, physiological, biochemical, and genetic aspects. The mechanisms of colonization and infection of the plant tissues are better understood, and the BNF contribution to the soil/plant system has been determined. Inoculation studies with diazotrophs showed that endophytic bacteria have a much higher BNF contribution potential than associative diazotrophs. In addition, it was found that the plant genotype influences the plant/bacteria association. Recent data suggest that more studies should be conducted on the endophytic association to strengthen the BNF potential. The ongoing genome sequencing programs: RIOGENE (Gluconacetobacter diazotrophicus) and GENOPAR (Herbaspirillum seropedicae) reflect the commitment to the BNF study in Brazil and should allow the country to continue in the forefront of research related to the BNF process in Graminaceous plants.

  16. Using synthetic biology to distinguish and overcome regulatory and functional barriers related to nitrogen fixation.

    Science.gov (United States)

    Wang, Xia; Yang, Jian-Guo; Chen, Li; Wang, Ji-Long; Cheng, Qi; Dixon, Ray; Wang, Yi-Ping

    2013-01-01

    Biological nitrogen fixation is a complex process requiring multiple genes working in concert. To date, the Klebsiella pneumoniae nif gene cluster, divided into seven operons, is one of the most studied systems. Its nitrogen fixation capacity is subject to complex cascade regulation and physiological limitations. In this report, the entire K. pneumoniae nif gene cluster was reassembled as operon-based BioBrick parts in Escherichia coli. It provided ~100% activity of native K. pneumoniae system. Based on the expression levels of these BioBrick parts, a T7 RNA polymerase-LacI expression system was used to replace the σ(54)-dependent promoters located upstream of nif operons. Expression patterns of nif operons were critical for the maximum activity of the recombinant system. By mimicking these expression levels with variable-strength T7-dependent promoters, ~42% of the nitrogenase activity of the σ(54)-dependent nif system was achieved in E. coli. When the newly constructed T7-dependent nif system was challenged with different genetic and physiological conditions, it bypassed the original complex regulatory circuits, with minor physiological limitations. Therefore, we have successfully replaced the nif regulatory elements with a simple expression system that may provide the first step for further research of introducing nif genes into eukaryotic organelles, which has considerable potentials in agro-biotechnology.

  17. Demonstrating Compliance with Stringent Nitrogen Limits Using a Biological Nutrient Removal Process in California's Central Valley.

    Science.gov (United States)

    Merlo, Rion; Witzgall, Bob; Yu, William; Ohlinger, Kurt; Ramberg, Steve; De Las Casas, Carla; Henneman, Seppi; Parker, Denny

    2015-12-01

    The Sacramento Regional County Sanitation District (District) must be compliant with stringent nitrogen limits by 2021 that the existing treatment facilities cannot meet. An 11-month pilot study was conducted to confirm that these limits could be met with an air activated sludge biological nutrient removal (BNR) process. The pilot BNR treated an average flow of 946 m(3)/d and demonstrated that it could reliably meet the ammonia limit, but that external carbon addition may be necessary to satisfy the nitrate limit. The BNR process performed well throughout the 11 months of operation with good settleability, minimal nocardioform content, and high quality secondary effluent. The BNR process was operated at a minimum pH of 6.4 with no noticeable impact to nitrification rates. Increased secondary sludge production was observed during rainfall events and is attributed to a change in wastewater influent characteristics.

  18. INFLUENCE OF BIOLOGICAL AND THERMAL TRANSFORMED SEWAGE SLUDGE APPLICATION ON MANGANESE CONTENT IN PLANTS AND SOIL

    Directory of Open Access Journals (Sweden)

    Małgorzata Koncewicz-Baran

    2014-10-01

    Full Text Available A great variety of sewage sludge treatment methods, due to the agent (chemical, biological, thermal leads to the formation of varying ‘products’ properties, including the content of heavy metals forms. The aim of the study was to determine the effects of biologically and thermally transformed sewage sludge on the manganese content in plants and form of this element in the soil. The study was based on a two-year pot experiment. In this study was used stabilized sewage sludge collected from Wastewater Treatment Plant Krakow – ”Płaszów” and its mixtures with wheat straw in the gravimetric ratio 1:1 in conversion to material dry matter, transformed biologically (composting by 117 days in a bioreactor and thermally (in the furnace chamber with no air access by the following procedure exposed to temperatures of 130 °C for 40 min → 200 °C for 30 min. In both years of the study biologically and thermally transformed mixtures of sewage sludge with wheat straw demonstrated similar impact on the amount of biomass plants to the pig manure. Bigger amounts of manganese were assessed in oat biomass than in spring rape biomass. The applied sewage sludge and its biologically and thermally converted mixtures did not significantly affect manganese content in plant biomass in comparison with the farmyard manure. The applied fertilization did not modify the values of translocation and bioaccumulation ratios of manganese in the above-ground parts and roots of spring rape and oat. No increase in the content of the available to plants forms of manganese in the soil after applying biologically and thermally transformed sewage sludge mixtures with straw was detected. In the second year, lower contents of these manganese forms were noted in the soil of all objects compared with the first year of the experiment.

  19. Carbon allocation, nodulation, and biological nitrogen fixation of black locust (Robinia pseudoacacia L. under soil water limitation

    Directory of Open Access Journals (Sweden)

    Dario Mantovani

    2015-12-01

    Full Text Available The pioneer tree black locust (Robinia pseudoacacia L. is a drought-resistant tree and, in symbiosis with Rhizobium, able to fix dinitrogen from the atmosphere. It is, therefore, an interesting species for marginal lands where soil amelioration is sought in addition to economic gain. However, the interaction between soil water availability, carbon allocation and nitrogen fixation is important for a successful establishment of trees on marginal lands and has not yet been investigated for black locust. Twoyear-old trees were grown under various soil water conditions and drought cycles. The stable isotopic composition of C (δ 13C and N (δ 15N of the leaves was used to identify i the effective drought condition of the treatments and ii the portion N accrued from the atmosphere by the biological nitrogen fixation. Drought-stressed plants significantly reduced their total aboveground biomass production, which was linearly linked to tree transpiration. The shoot:root ratio values changed from 2.2 for the drought-stressed to 4.3 for the well-watered plants. Our investigation shows that drought stress increases the nodule biomass of black locust in order to maintain biological nitrogen fixation and to counteract the lower soil nitrogen availability. The biological nitrogen fixation of drought-stressed trees could be maintained at relatively higher values compared to the well-watered trees. The average leaf nitrogen content varied between 2.8% and 3.0% and was not influenced by the drought stress. Carbon fixation, carbon allocation, and biological nitrogen fixation are to some extent balanced at low irrigation and allow Robinia to cope with long-term water constraints. The combination of black locust’s ecophysiological and morphological plasticity make it interesting as a biomass source for bioenergy and timber production, even in nutrient-limited and drought-affected areas of Europe.

  20. Biological inquiry: a new course and assessment plan in response to the call to transform undergraduate biology.

    Science.gov (United States)

    Goldey, Ellen S; Abercrombie, Clarence L; Ivy, Tracie M; Kusher, Dave I; Moeller, John F; Rayner, Doug A; Smith, Charles F; Spivey, Natalie W

    2012-01-01

    We transformed our first-year curriculum in biology with a new course, Biological Inquiry, in which >50% of all incoming, first-year students enroll. The course replaced a traditional, content-driven course that relied on outdated approaches to teaching and learning. We diversified pedagogical practices by adopting guided inquiry in class and in labs, which are devoted to building authentic research skills through open-ended experiments. Students develop core biological knowledge, from the ecosystem to molecular level, and core skills through regular practice in hypothesis testing, reading primary literature, analyzing data, interpreting results, writing in disciplinary style, and working in teams. Assignments and exams require higher-order cognitive processes, and students build new knowledge and skills through investigation of real-world problems (e.g., malaria), which engages students' interest. Evidence from direct and indirect assessment has guided continuous course revision and has revealed that compared with the course it replaced, Biological Inquiry produces significant learning gains in all targeted areas. It also retains 94% of students (both BA and BS track) compared with 79% in the majors-only course it replaced. The project has had broad impact across the entire college and reflects the input of numerous constituencies and close collaboration among biology professors and students.

  1. Nitrogen Molecule-Ethylene Sulfide Complex Investigated by Fourier Transform Microwave Spectroscopy and AB Initio Calculation

    Science.gov (United States)

    Iwano, Sakae; Kawashima, Yoshiyuki; Hirota, Eizi

    2016-06-01

    We have systematically investigated the van der Waals complexes consisting of the one from each of the two groups: (Rg, CO, N_2 or CO_2) and (dimethyl ether, dimethyl sulfide, ethylene oxide or ethylene sulfide), by using Fourier transform microwave spectroscopy supplemented by ab initio MO calculations, in order to understand the dynamical behavior of van der Waals complexes and to obtain information on the potential function to internal motions in complexes. Two examples of the N_2 complex were investigated: N_2-DME (dimethyl ether), for which we reported a preliminary result and N_2-EO (ethylene oxide). In the present study we focused attention to the N_2-ES (ethylene sulfide) complex. We have detected two sets of the {b}-type transitions for the 15N_2-ES in ortho and para states, and have analyzed them by using the asymmetric-rotor program of {A}-reduction. In contrast with the N_2-EO, for which each of the ortho and para states were found split into a strong/weak pair, only some transitions of the 15N_2-ES were accompanied by two or three components. The observed spectra of the 14N_2-ES were complicated because of hyperfine splittings due to the nuclear quadrupole coupling of the two nitrogen atoms. We concluded that the N_2 moiety was located in the plane perpendicular to the C-S-C plane and bisecting the CSC angle of the ES. Two isomers were expected to exist for 15NN-ES, one with 15N in the inner and the other in the outer position, and in fact two sets of the spectra were detected. We have carried out ab initio molecular orbital calculations at the level of MP2 with basis sets 6-311++G(d, p), aug-cc-pVDZ, and aug-cc-pVTZ, to complement the information on the intracomplex motions obtained from the observed rotational spectra. Y. Kawashima, A. Sato, Y. Orita, and E. Hirota, J. Phys. Chem. A, 2012 116, 1224 Y. Kawashima, Y. Tatamitani, Y. Morita, and E. Hirota, 61st International Symposium on Molecular Spectroscopy, TE10 (2006) Y. Kawashima and E. Hirota, J

  2. Isotopically enriched ammonium shows high nitrogen transformation in the pile top zone of dairy manure compost

    Directory of Open Access Journals (Sweden)

    K. Maeda

    2016-03-01

    significantly high 15N (δ15N: 12.7–29.8 ‰ values, indicating that extremely high nitrogen conversion, nitrification–denitrification activity of the microbes and NH3 volatilization occurred in this zone.

  3. Systems biology of bacterial nitrogen fixation: High-throughput technology and its integrative description with constraint-based modeling

    Directory of Open Access Journals (Sweden)

    Resendis-Antonio Osbaldo

    2011-07-01

    Full Text Available Abstract Background Bacterial nitrogen fixation is the biological process by which atmospheric nitrogen is uptaken by bacteroids located in plant root nodules and converted into ammonium through the enzymatic activity of nitrogenase. In practice, this biological process serves as a natural form of fertilization and its optimization has significant implications in sustainable agricultural programs. Currently, the advent of high-throughput technology supplies with valuable data that contribute to understanding the metabolic activity during bacterial nitrogen fixation. This undertaking is not trivial, and the development of computational methods useful in accomplishing an integrative, descriptive and predictive framework is a crucial issue to decoding the principles that regulated the metabolic activity of this biological process. Results In this work we present a systems biology description of the metabolic activity in bacterial nitrogen fixation. This was accomplished by an integrative analysis involving high-throughput data and constraint-based modeling to characterize the metabolic activity in Rhizobium etli bacteroids located at the root nodules of Phaseolus vulgaris (bean plant. Proteome and transcriptome technologies led us to identify 415 proteins and 689 up-regulated genes that orchestrate this biological process. Taking into account these data, we: 1 extended the metabolic reconstruction reported for R. etli; 2 simulated the metabolic activity during symbiotic nitrogen fixation; and 3 evaluated the in silico results in terms of bacteria phenotype. Notably, constraint-based modeling simulated nitrogen fixation activity in such a way that 76.83% of the enzymes and 69.48% of the genes were experimentally justified. Finally, to further assess the predictive scope of the computational model, gene deletion analysis was carried out on nine metabolic enzymes. Our model concluded that an altered metabolic activity on these enzymes induced

  4. Biological nitrogen fixation and biomass accumulation within poplar clones as a result of inoculations with diazotrophic endophyte consortia.

    Science.gov (United States)

    Knoth, Jenny L; Kim, Soo-Hyung; Ettl, Gregory J; Doty, Sharon L

    2014-01-01

    Sustainable production of biomass for bioenergy relies on low-input crop production. Inoculation of bioenergy crops with plant growth-promoting endophytes has the potential to reduce fertilizer inputs through the enhancement of biological nitrogen fixation (BNF). Endophytes isolated from native poplar growing in nutrient-poor conditions were selected for a series of glasshouse and field trials designed to test the overall hypothesis that naturally occurring diazotrophic endophytes impart growth promotion of the host plants. Endophyte inoculations contributed to increased biomass over uninoculated control plants. This growth promotion was more pronounced with multi-strain consortia than with single-strain inocula. Biological nitrogen fixation was estimated through (15)N isotope dilution to be 65% nitrogen derived from air (Ndfa). Phenotypic plasticity in biomass allocation and branch production observed as a result of endophyte inoculations may be useful in bioenergy crop breeding and engineering programs.

  5. Biological Effects of Potato Plants Transformation with Glucose Oxidase Gene and their Resistance to Hyperthermia

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    O.I. Grabelnych

    2017-02-01

    Full Text Available It is known that regulation of plant tolerance to adverse environmental factors is connected with short term increase of the concentration of endogenous reactive oxygen species (ROS, which are signalling molecules for the induction of protective mechanisms. Introduction and expression of heterologous gox gene, which encodes glucose oxidase enzyme in plant genome, induce constantly higher content of hydrogen peroxide in plant tissues. It is not known how the introduction of native or modified gox gene affects the plant resistance to high-temperature stress, one of the most commonly used model for the study of stress response and thermal tolerance. In this study, we investigated biological effects of transformation and evaluated the resistance to temperature stress of potato plants with altered levels of glucose oxidase expression. Transformation of potato plants by gox gene led to the more early coming out from tuber dormancy of transformed plants and slower growth rate. Transformants containing the glucose oxidase gene were more sensitive to lethal thermal shock (50 °C, 90 min than the transformant with the empty vector (pBI or untransformed plants (CK. Pre-heating of plants at 37 °C significantly weakened the damaging effect of lethal thermal shock. This attenuation was more significant in the non-transformed plants.

  6. [Effects of water levels and the additions of different nitrogen forms on soil net nitrogen transformation rate and N2O emission in subtropical forest soils].

    Science.gov (United States)

    Ma, Fen; Ma, Hong-liang; Qiu, Hong; Yang, Hong-yu

    2015-02-01

    An incubation experiment was conducted to investigate the effects of the additions of different nitrogen forms on nitrogen transformation in red soils of subtropical forest under soil moisture conditions with 40%, 70% and 110% of water holding capacity (WHC). The results showed that soil net mineralization and ammonification rates were maximum at 70% WHC and minimum at 40% WHC. Compared with the control, the addition of NO(3-)-N decreased the soil net mineralization and ammonification rates by 56.1% and 43.0% under 70% WHC condition, and decreased by 68.2% and 19.0% under 110% WHC, respectively. However, the proportion of ammonification to mineralization increased at 70% and 110% WHC, which suggested that nitrate addition inhibited the nitrification. With addition of NO(3-)-N at 110% WHC, the net nitrification rate was lowest while N20 emission was highest with the concomitant decrease of nitrate content, indicating that N2O emission was largely derived from denitrification. However, at 40% WHC and 70% WHC, the maximum N20 flux was found at the early stage of incubation. Even with addition of NH(4+)-N and NO(3-)-N, N2O flux did not change much at the latter stage of incubation, indicating that autotrophic nitrification was dominant for N20 production at the early stage of incubation. Under 40% WHC condition, soluble organic carbon increased more and it increased largely with NH(4+)-N addition, which meant NH(4+)-N addition could enhance the mineralization of soil organic matter. Under 40% and 110% WHC conditions, the addition of NH(4+)-N increased significantly the soil soluble organic nitrogen (SON) by 73.6% and 176.6% compared with the control, respectively. A significant increase of 78.7% for SON was only found at 40% WHC under addition of NO(3-)-N compared with the control. These results showed that high soil moisture condition and addition of NH(4+)-N were of benefit to SON formation.

  7. Biological nitrogen removal with enhanced phosphate uptake in (AO)2SBR using single sludge system

    Institute of Scientific and Technical Information of China (English)

    JIANG Yi-feng; WANG Lin; WANG Bao-zhen; HE Sheng-bing; LUI Shuo

    2004-01-01

    Simultaneous biological phosphorus and nitrogen removal with enhanced anoxic phosphate uptake via nitrite was investigated in an anaerobic-aerobic-anoxic-aerobic sequencing batch reactor((AO)2 SBR). The system showed stable phosphorus and nitrogen removal performance, and average removals for COD, TN and TP were 90%, 91% and 96%, respectively. The conditions of pH 7.5-8.0 and temperature 32℃ were found detrimental to nitrite oxidation bacteria but favorable to ammonia oxidizers, and the corresponding specific oxygen uptake rates(SOUR) for phase 1 and 2 of nitrification process were 0.7 and 15 mgO2/(gVSS·h) in respect, which led to the nitrite accumulation in aerobic phase of(AO)2 SBR. Respiratory tests showed that 40 mgNO2-N/L did not deteriorate the sludge activity drastically, and it implied that exposure of sludge to nitrite periodically enabled the biomass to have more tolerance capacity to resist the restraining effects from nitrite. In addition, batch tests were carried out and verified that denitrifying phosphorus accumulation organisms(DPAOs) could be enriched in a single sludge system coexisting with nitrifiers by introducing an anoxic phase in an anaerobic-aerobic SBR, and the ratio of the anoxic phosphate uptake capacity to aerobic phosphate uptake capacity was 45%. It was also found that nitrite(up to 20 mgNO2-N/L) was not inhibitory to anoxic phosphate uptake and could serve as an electron acceptor like nitrate, but presented poorer efficiency compared with nitrate.

  8. Climatic and Grazing Controls on Biological Soil Crust Nitrogen Fixation in Semi-arid Ecosystems

    Science.gov (United States)

    Schwabedissen, S. G.; Reed, S.; Lohse, K. A.; Magnuson, T. S.

    2014-12-01

    Nitrogen, next to water, is believed to be the main limiting resource in arid and semi-arid ecosystems. Biological soil crusts (biocrusts) -a surface community of mosses, lichens and cyanobacteria-have been found to be the main influx of "new" nitrogen (N) into many dryland ecosystems. Controls on biocrust N fixation rates include climate (temperature and moisture), phosphorus availability, and disturbance factors such as trampling, yet a systematic examination of climatic and disturbance controls on biocrusts communities is lacking. Biocrust samples were collected along an elevation gradient in the Reynolds Creek Experimental Watershed near Murphy, Idaho. Four sites were selected from a sagebrush steppe ecosystem with precipitation ranging from ≤250mm/yr to ≥1100mm/yr. Each site included 5 grazed plots and one historic exclosure plot that has been free from grazing for more than 40 years. Five samples each were collected from under plants and from interplant spaces from the grazed plots and exclosures and analyzed for potential N fixation using an acetylene reduction assay. We hypothesized that N fixation rates would be the highest in the exclosures of the two middle sites along the elevation gradient, due to the lack of disturbance and optimal temperature and moisture, respectively. As predicted, results showed higher rates of potential N fixation in exclosures than non-exclosures at a mid-elevation 8.4 ± 3.1 kg N/ha/yr in the exclosures compared to 1.8 ± 1.5 kg N/ha/yr indicating that grazing may reduce N fixation activity. Interestingly, rates were 2-5 times lower under plant canopies compared to interplant spaces at all but the highest elevation site. Findings from our study suggest that biocrust N fixation may be a dominant input of N into theses dryland systems and, in line with our hypotheses, that climate, location within the landscape, and disturbance may interact to regulate the rates of this fundamental ecosystem process.

  9. Regional constraints to biological nitrogen fixation in post-fire forest communities.

    Science.gov (United States)

    Yelenik, Stephanie; Perakis, Steven; Hibbs, David

    2013-03-01

    Biological nitrogen fixation (BNF) is a key ecological process that can restore nitrogen (N) lost in wildfire and shape the pace and pattern of post-fire forest recovery. To date, there is limited information on how climate and soil fertility interact to influence different pathways of BNF in early forest succession. We studied asymbiotic (forest floor and soil) and symbiotic (the shrub Ceanothus integerrimus) BNF rates across six sites in the Klamath National Forest, California, USA. We used combined gradient and experimental phosphorus (P) fertilization studies to explore cross-site variation in BNF rates and then related these rates to abiotic and biotic variables. We estimate that our measured BNF rates 22 years after wildfire (6.1-12.1 kg N x ha(-1) x yr(-1)) are unlikely to fully replace wildfire N losses. We found that asymbiotic BNF is P limited, although this is not the case for symbiotic BNF in Ceanothus. In contrast, Ceanothus BNF is largely driven by competition from other vegetation: in high-productivity sites with high potential evapotranspiration (Et), shrub biomass is suppressed as tree biomass increases. Because shrub biomass governed cross-site variation in Ceanothus BNF, this competitive interaction led to lower BNF in sites with high productivity and Et. Overall, these results suggest that the effects of nutrients play a larger role in driving asymbiotic than symbiotic fixation across our post-fire sites. However, because symbiotic BNF is 8-90x greater than asymbiotic BNF, it is interspecific plant competition that governs overall BNF inputs in these forests.

  10. Optimal Plant Carbon Allocation Implies a Biological Control on Nitrogen Availability

    Science.gov (United States)

    Prentice, I. C.; Stocker, B. D.

    2015-12-01

    The degree to which nitrogen availability limits the terrestrial C sink under rising CO2 is a key uncertainty in carbon cycle and climate change projections. Results from ecosystem manipulation studies and meta-analyses suggest that plant C allocation to roots adjusts dynamically under varying degrees of nitrogen availability and other soil fertility parameters. In addition, the ratio of biomass production to GPP appears to decline under nutrient scarcity. This reflects increasing plant C exudation into the soil (Cex) with decreasing nutrient availability. Cex is consumed by an array of soil organisms and may imply an improvement of nutrient availability to the plant. Thus, N availability is under biological control, but incurs a C cost. In spite of clear observational support, this concept is left unaccounted for in Earth system models. We develop a model for the coupled cycles of C and N in terrestrial ecosystems to explore optimal plant C allocation under rising CO2 and its implications for the ecosystem C balance. The model follows a balanced growth approach, accounting for the trade-offs between leaf versus root growth and Cex in balancing C fixation and N uptake. We assume that Cex is proportional to root mass, and that the ratio of N uptake (Nup) to Cex is proportional to inorganic N concentration in the soil solution. We further assume that Cex is consumed by N2-fixing processes if the ratio of Nup:Cex falls below the inverse of the C cost of N2-fixation. Our analysis thereby accounts for the feedbacks between ecosystem C and N cycling and stoichiometry. We address the question of how the plant C economy will adjust under rising atmospheric CO2 and what this implies for the ecosystem C balance and the degree of N limitation.

  11. Regional constraints to biological nitrogen fixation in post-fire forest communities

    Science.gov (United States)

    Yelenik, Stephanie; Perakis, Steven S.; Hibbs, David

    2013-01-01

    Biological nitrogen fixation (BNF) is a key ecological process that can restore nitrogen (N) lost in wildfire and shape the pace and pattern of post-fire forest recovery. To date, there is limited information on how climate and soil fertility interact to influence different pathways of BNF in early forest succession. We studied asymbiotic (forest floor and soil) and symbiotic (the shrub Ceanothus integerrimus) BNF rates across six sites in the Klamath National Forest, California, USA. We used combined gradient and experimental phosphorus (P) fertilization studies to explore cross-site variation in BNF rates and then related these rates to abiotic and biotic variables. We estimate that our measured BNF rates 22 years after wildfire (6.1–12.1 kg N·ha-1·yr-1) are unlikely to fully replace wildfire N losses. We found that asymbiotic BNF is P limited, although this is not the case for symbiotic BNF in Ceanothus. In contrast, Ceanothus BNF is largely driven by competition from other vegetation: in high-productivity sites with high potential evapotranspiration (Et), shrub biomass is suppressed as tree biomass increases. Because shrub biomass governed cross-site variation in Ceanothus BNF, this competitive interaction led to lower BNF in sites with high productivity and Et. Overall, these results suggest that the effects of nutrients play a larger role in driving asymbiotic than symbiotic fixation across our post-fire sites. However, because symbiotic BNF is 8–90x greater than asymbiotic BNF, it is interspecific plant competition that governs overall BNF inputs in these forests.

  12. Artificial intelligence models for predicting the performance of biological wastewater treatment plant in the removal of Kjeldahl Nitrogen from wastewater

    Science.gov (United States)

    Manu, D. S.; Thalla, Arun Kumar

    2017-01-01

    The current work demonstrates the support vector machine (SVM) and adaptive neuro-fuzzy inference system (ANFIS) modeling to assess the removal efficiency of Kjeldahl Nitrogen of a full-scale aerobic biological wastewater treatment plant. The influent variables such as pH, chemical oxygen demand, total solids (TS), free ammonia, ammonia nitrogen and Kjeldahl Nitrogen are used as input variables during modeling. Model development focused on postulating an adaptive, functional, real-time and alternative approach for modeling the removal efficiency of Kjeldahl Nitrogen. The input variables used for modeling were daily time series data recorded at wastewater treatment plant (WWTP) located in Mangalore during the period June 2014-September 2014. The performance of ANFIS model developed using Gbell and trapezoidal membership functions (MFs) and SVM are assessed using different statistical indices like root mean square error, correlation coefficients (CC) and Nash Sutcliff error (NSE). The errors related to the prediction of effluent Kjeldahl Nitrogen concentration by the SVM modeling appeared to be reasonable when compared to that of ANFIS models with Gbell and trapezoidal MF. From the performance evaluation of the developed SVM model, it is observed that the approach is capable to define the inter-relationship between various wastewater quality variables and thus SVM can be potentially applied for evaluating the efficiency of aerobic biological processes in WWTP.

  13. Biological effects of low energy nitrogen ion implantation on Jatropha curcas L. seed germination

    Energy Technology Data Exchange (ETDEWEB)

    Xu Gang, E-mail: xg335300@yahoo.com.cn [Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025 (China); Institute of Entomology, Guizhou University, Guiyang 550025 (China); Wang Xiaoteng [Department of Agricultural Resources and Environment, College of Agricultural, Guizhou University, Guiyang 550025 (China); Gan Cailing; Fang Yanqiong; Zhang Meng [College of Life Sciences, Guizhou University, Guiyang 550025 (China)

    2012-09-15

    Highlights: Black-Right-Pointing-Pointer We analyzed biological effects of N{sup +} implantation on dry Jatropha curcas seed. Black-Right-Pointing-Pointer N{sup +} implantation greatly decreased seedling survival rate. Black-Right-Pointing-Pointer At doses beyond 15 Multiplication-Sign 10{sup 16} ion cm{sup -2}, biological repair took place. Black-Right-Pointing-Pointer CAT was essential for H{sub 2}O{sub 2} removal. POD mainly functioned as seed was severely hurt. Black-Right-Pointing-Pointer HAsA-GSH cycle mainly contributed to the regeneration of HAsA. - Abstract: To explore the biological effects of nitrogen ion beam implantation on dry Jatropha curcas seed, a beam of N{sup +} with energy of 25 keV was applied to treat the dry seed at six different doses. N{sup +} beam implantation greatly decreased germination rate and seedling survival rate. The doses within the range of 12 Multiplication-Sign 10{sup 16} to 15 Multiplication-Sign 10{sup 16} ions cm{sup -2} severely damaged the seeds: total antioxidant capacity (TAC), germination rate, seedling survival rate, reduced ascorbate acid (HAsA) and reduced glutathione (GSH) contents, and most of the tested antioxidases activity (i.e. catalase (CAT), ascorbate peroxidase (APX) and superoxide dismutase (SOD)) reached their lowest levels. At a dose of 18 Multiplication-Sign 10{sup 16} ion cm{sup -2}, biological repair took place: moderate increases were found in TAC, germination rate, seedling survival rate, HAsA and GSH contents, and some antioxidant enzyme activities (i.e. CAT, APX, SOD and GPX). The dose of 18 Multiplication-Sign 10{sup 16} ions cm{sup -2} may be the optimum dose for use in dry J. curcas seed mutation breeding. CAT, HAsA and GSH contributed to the increase of TAC, but CAT was the most important. POD performed its important role as seed was severely damaged. The main role of the HAsA-GSH cycle appeared to be for regeneration of HAsA.

  14. Isotopically enriched ammonium shows high nitrogen transformation in the pile top zone of dairy manure compost

    Science.gov (United States)

    Maeda, Koki; Toyoda, Sakae; Yano, Midori; Hattori, Shohei; Fukasawa, Makoto; Nakajima, Keiichi; Yoshida, Naohiro

    2016-03-01

    Nitrogen isotope ratios (δ15N) of NH4+ in dairy manure compost piles with and without bulking agent (10 % w/w) were compared to understand the effects of the use of bulking agent on nitrogen conversion during manure composting. The δ15N-NH4+ values in each of three pile zones (top, side and core) were also compared. At the end of the process, piles with bulking agent showed significantly higher δ15N values (17.7 ± 1.3 ‰) than piles without bulking agent (11.8 ± 0.9 ‰), reflecting the significantly higher nitrogen conversion and NH3 loss in the former. The samples from the top zone, especially in the piles with bulking agent, showed very high NH4+ concentrations with significantly high 15N (δ15N: 12.7-29.8 ‰) values, indicating that extremely high nitrogen conversion, nitrification-denitrification activity of the microbes and NH3 volatilization occurred in this zone.

  15. Biological Nitrogen Fixation by Legumes and N Uptake by Coffee Plants

    Directory of Open Access Journals (Sweden)

    Eduardo de Sá Mendonça

    Full Text Available ABSTRACT Green manures are an alternative for substituting or supplementing mineral nitrogen fertilizers. The aim of this study was to quantify biological N fixation (BNF and the N contribution derived from BNF (N-BNF to N levels in leaves of coffee intercropped with legumes grown on four family farms located in the mountainous region of the Atlantic Forest Biome in the state of Minas Gerais, Brazil. The following green manures were evaluated: pinto peanuts (Arachis pintoi, calopo (Calopogonium mucunoides, crotalaria (Crotalaria spectabilis, Brazilian stylo (Stylosanthes guianensis, pigeon pea (Cajanus cajan, lablab beans (Dolichos lablab, and velvet beans (Stizolobium deeringianum, and spontaneous plants. The experimental design was randomized blocks with a 4 × 8 factorial arrangement (four agricultural properties and eight green manures, and four replications. One hundred grams of fresh matter of each green manure plant were dried in an oven to obtain the dry matter. We then performed chemical and biochemical characterizations and determined the levels of 15N and 14N, which were used to quantify BNF through the 15N (δ15N natural abundance technique. The legumes C. mucunoides, S. guianensis, C. cajan, and D. lablab had the highest rates of BNF, at 46.1, 45.9, 44.4, and 42.9 %, respectively. C. cajan was the legume that contributed the largest amount of N (44.42 kg ha-1 via BNF.C. cajan, C. spectabilis, and C. mucunoides transferred 55.8, 48.8, and 48.1 %, respectively, of the N from biological fixation to the coffee plants. The use of legumes intercropped with coffee plants is important in supplying N, as well as in transferring N derived from BNF to nutrition of the coffee plants.

  16. [Effect of Ferric Iron on Nitrogen Immigration and Transformation and Nitrous Oxide Emission During Simultaneous Nitrification Denitrification Process].

    Science.gov (United States)

    Li, Hao; Yan, Yu-jie; Xie, Hui-jun; Jia, Wen-lin; Hu, Zhen; Zhang, Jian

    2015-04-01

    Effect of Fe(III) concentration on nitrogen immigration and transformation and nitrous oxide emission during the simultaneous nitrification denitrification (SND) process was investigated. Higher nitrogen removal efficiency was obtained when the Fe(III) concentration was 20 mg x L(-1), while lower nitrogen removal efficiency was observed when the Fe (III) concentration turned to 60 mg x L(-1). In addition, higher Fe(III) concentration significantly enhanced the N2O emission, as well as the N2O conversion ratio. This was mainly attributed to (1) the high concentration of nitrite accumulation during the oxic stage, which was caused by lower dehydrogenase activity at high Fe(III) concentration; (2) less PHB production during the anoxic stage, which would led to shortage of carbon source for denitrification in the following oxic stage. The results also showed that Fe(III) addition could improve the TP removal efficiency. TP removal efficiency increased with increasing Fe(III) concentration, mainly because of extra chemical reaction.

  17. Biological nitrogen fixation: rates, patterns and ecological controls in terrestrial ecosystems

    Science.gov (United States)

    Vitousek, Peter M.; Menge, Duncan N.L.; Reed, Sasha C.; Cleveland, Cory C.

    2013-01-01

    New techniques have identified a wide range of organisms with the capacity to carry out biological nitrogen fixation (BNF)—greatly expanding our appreciation of the diversity and ubiquity of N fixers—but our understanding of the rates and controls of BNF at ecosystem and global scales has not advanced at the same pace. Nevertheless, determining rates and controls of BNF is crucial to placing anthropogenic changes to the N cycle in context, and to understanding, predicting and managing many aspects of global environmental change. Here, we estimate terrestrial BNF for a pre-industrial world by combining information on N fluxes with 15N relative abundance data for terrestrial ecosystems. Our estimate is that pre-industrial N fixation was 58 (range of 40–100) Tg N fixed yr−1; adding conservative assumptions for geological N reduces our best estimate to 44 Tg N yr−1. This approach yields substantially lower estimates than most recent calculations; it suggests that the magnitude of human alternation of the N cycle is substantially larger than has been assumed.

  18. The interactive effects of temperature and light on biological nitrogen fixation in boreal forests.

    Science.gov (United States)

    Gundale, Michael J; Nilsson, Madeleine; Bansal, Sheel; Jäderlund, Anders

    2012-04-01

    Plant productivity is predicted to increase in northern latitudes as a result of climate warming; however, this may depend on whether biological nitrogen (N)-fixation also increases. We evaluated how the variation in temperature and light affects N-fixation by two boreal feather mosses, Pleurozium schreberi and Hylocomium splendens, which are the primary source of N-fixation in most boreal environments. We measured N-fixation rates 2 and 4 wk after exposure to a factorial combination of environments of normal, intermediate and high temperature (16.3, 22.0 and 30.3°C) and light (148.0, 295.7 and 517.3 μmol m(-2) s(-1)). Our results showed that P. schreberi achieved higher N-fixation rates relative to H. splendens in response to warming treatments, but that the highest warming treatment eventually caused N-fixation to decline for both species. Light strongly interacted with warming treatments, having positive effects at low or intermediate temperatures and damaging effects at high temperatures. These results suggest that climate warming may increase N-fixation in boreal forests, but that increased shading by the forest canopy or the occurrence of extreme temperature events could limit increases. They also suggest that P. schreberi may become a larger source of N in boreal forests relative to H. splendens as climate warming progresses.

  19. A biologically inspired neural network model to transformation invariant object recognition

    Science.gov (United States)

    Iftekharuddin, Khan M.; Li, Yaqin; Siddiqui, Faraz

    2007-09-01

    Transformation invariant image recognition has been an active research area due to its widespread applications in a variety of fields such as military operations, robotics, medical practices, geographic scene analysis, and many others. The primary goal for this research is detection of objects in the presence of image transformations such as changes in resolution, rotation, translation, scale and occlusion. We investigate a biologically-inspired neural network (NN) model for such transformation-invariant object recognition. In a classical training-testing setup for NN, the performance is largely dependent on the range of transformation or orientation involved in training. However, an even more serious dilemma is that there may not be enough training data available for successful learning or even no training data at all. To alleviate this problem, a biologically inspired reinforcement learning (RL) approach is proposed. In this paper, the RL approach is explored for object recognition with different types of transformations such as changes in scale, size, resolution and rotation. The RL is implemented in an adaptive critic design (ACD) framework, which approximates the neuro-dynamic programming of an action network and a critic network, respectively. Two ACD algorithms such as Heuristic Dynamic Programming (HDP) and Dual Heuristic dynamic Programming (DHP) are investigated to obtain transformation invariant object recognition. The two learning algorithms are evaluated statistically using simulated transformations in images as well as with a large-scale UMIST face database with pose variations. In the face database authentication case, the 90° out-of-plane rotation of faces from 20 different subjects in the UMIST database is used. Our simulations show promising results for both designs for transformation-invariant object recognition and authentication of faces. Comparing the two algorithms, DHP outperforms HDP in learning capability, as DHP takes fewer steps to

  20. A DO- and pH-Based Early Warning System of Nitrification Inhibition for Biological Nitrogen Removal Processes

    Directory of Open Access Journals (Sweden)

    Hyunook Kim

    2012-11-01

    Full Text Available In Korea, more than 80% of municipal wastewater treatment plants (WWTPs with capacities of 500 m3·d−1 or more are capable of removing nitrogen from wastewater through biological nitrification and denitrification processes. Normally, these biological processes show excellent performance, but if a toxic chemical is present in the influent to a WWTP, the biological processes (especially, the nitrification process may be affected and fail to function normally; nitrifying bacteria are known very vulnerable to toxic substances. Then, the toxic compound as well as the nitrogen in wastewater may be discharged into a receiving water body without any proper treatment. Moreover, it may take significant time for the process to return back its normal state. In this study, a DO- and pH-based strategy to identify potential nitrification inhibition was developed to detect early the inflow of toxic compounds to a biological nitrogen removal process. This strategy utilizes significant changes observed in the oxygen uptake rate and the pH profiles of the mixed liquor when the activity of nitrifying bacteria is inhibited. Using the strategy, the toxicity from test wastewater with 2.5 mg·L−1 Hg2+, 0.5 mg·L−1 allythiourea, or 0.25 mg·L−1 chloroform could be successfully detected.

  1. Temperature Impact of Nitrogen Transformation in Technological System: Vertical Flow Constructed Wetland and Polishing Pond

    Science.gov (United States)

    Myszograj, Sylwia; Bydałek, Franciszek

    2016-12-01

    The article describes the results of the research, purpose of which was to evaluate influence of the temperature on the effectiveness of nitrification and denitrification in the sewage treatment system consisting of vertical flow constructed wetland and polishing pond. During the analysed period, the efficiency of removing total nitrogen was low and amounted to 12.7%. In the polishing pond in the summer period, content of total nitrogen in treated sewages was further decreased by nearly 50%. In the winter period, the polishing pond fulfilled mainly retention role and thus did not improve effectiveness of the whole system. Temperature coefficients, calculated on the basis of single first-order kinetics, for nitrification process in the filter bed (N-NH4+) and denitrification process in the polishing pond (N-NO3-) amounted to 1.039 and 1.089, respectively.

  2. Nitrous oxide flux and nitrogen transformations across a landscape gradient in Amazonia

    Science.gov (United States)

    Livingston, Gerald P.; Vitousek, Peter M.; Matson, Pamela A.

    1988-01-01

    Nitrous oxide flux and nitrogen turnover were measured in three types of Amazonian forest ecosystems within Reserva Florestal Ducke near Manaus, Brazil. Nitrogen mineralization and nitrate production measured during 10-day laboratory incubations were 3-4 times higher in clay soils associated with 'terra firme' forests on ridge-top and slope positions than in 'campinarana' forests on bottomland sand soils. In contrast, nitrous oxide fluxes did not differ significantly among sites, but were highly variable in space and time. The observed frequency distribution of flux was positively skewed, with a mean overall sites and all sampling times of 1.3 ng N2O-N/sq cm per hr. Overall, the flux estimates were comparable to or greater than those of temperature forests, but less than others reported for Amazoonia. Results from a field fertilization experiment suggest that most nitrous oxide flux was associated with denitrification of soil nitrate.

  3. Hepatic zonation of carbon and nitrogen fluxes derived from glutamine and ammonia transformations

    OpenAIRE

    Constantin Jorgete; Suzuki-Kemmelmeier Fumie; Comar Jurandir F; Bracht Adelar

    2010-01-01

    Abstract Background Glutaminase predominates in periportal hepatocytes and it has been proposed that it determines the glutamine-derived nitrogen flow through the urea cycle. Glutamine-derived urea production should, thus, be considerably faster in periportal hepatocytes. This postulate, based on indirect observations, has not yet been unequivocally demonstrated, making a direct investigation of ureogenesis from glutamine highly desirable. Methods Zonation of glutamine metabolism was investig...

  4. [Characteristics and Coupling Relationship of Soil Carbon and Nitrogen Transformation During In-situ Mineralization Cultivation in Forestlands in the Mountain Area of Southern Ningxia].

    Science.gov (United States)

    Ni, Yin-xia; Huang, Yi-mei; Niu, Dan; Zhao, Tong; Yan, Hao; Jiang, Yue-li

    2015-09-01

    The study aimed to investigate the characteristics and relationship between soil carbon and nitrogen transformation of artificial forestlands, which is one type of vegetation restoration in the mountain area of Southern Ningxia. Soil samples were collected every two months in a year from three forestlands, and the characteristics of soil organic carbon, dissolved carbon, microbial biomass carbon, organic nitrogen, inorganic nitrogen, soil ammonification, nitrification and mineralization rates, microbial immobilization rates and coupling of soil carbon and nitrogen were studied by the in-situ closed-top PVC tube incubation methods. The results showed that: in the process of in-situ incubation, the most obvious changes of carbon and nitrogen were in 61-120 days which was mainly affected by soil moisture; There were significantly positive correlations between the soil organic carbon and the total nitrogen, microbial biomass carbon and microbial biomass nitrogen, dissolved carbon and dissolved nitrogen; Transformation rates of soil organic carbon had significant effects on the soil ammonification, nitrification and microbial immobilization rates. It can be well simulated by model of linear regression equation; Microbial quotient, MBN/SON were significantly increased in soil of Caragana korshinskii land. Net nitrification rates, net mineralization rates in Caragana korshinskii land were significantly higher than that in Prunus davidiana and Prunus mandshurica lands.

  5. Complementary constraints from carbon (13C) and nitrogen (15N) isotopes on the glacial ocean's soft-tissue biological pump

    Science.gov (United States)

    Schmittner, A.; Somes, C. J.

    2016-06-01

    A three-dimensional, process-based model of the ocean's carbon and nitrogen cycles, including 13C and 15N isotopes, is used to explore effects of idealized changes in the soft-tissue biological pump. Results are presented from one preindustrial control run (piCtrl) and six simulations of the Last Glacial Maximum (LGM) with increasing values of the spatially constant maximum phytoplankton growth rate μmax, which accelerates biological nutrient utilization mimicking iron fertilization. The default LGM simulation, without increasing μmax and with a shallower and weaker Atlantic Meridional Overturning Circulation and increased sea ice cover, leads to 280 Pg more respired organic carbon (Corg) storage in the deep ocean with respect to piCtrl. Dissolved oxygen concentrations in the colder glacial thermocline increase, which reduces water column denitrification and, with delay, nitrogen fixation, thus increasing the ocean's fixed nitrogen inventory and decreasing δ15NNO3 almost everywhere. This simulation already fits sediment reconstructions of carbon and nitrogen isotopes relatively well, but it overestimates deep ocean δ13CDIC and underestimates δ15NNO3 at high latitudes. Increasing μmax enhances Corg and lowers deep ocean δ13CDIC, improving the agreement with sediment data. In the model's Antarctic and North Pacific Oceans modest increases in μmax result in higher δ15NNO3 due to enhanced local nutrient utilization, improving the agreement with reconstructions there. Models with moderately increased μmax fit both isotope data best, whereas large increases in nutrient utilization are inconsistent with nitrogen isotopes although they still fit the carbon isotopes reasonably well. The best fitting models reproduce major features of the glacial δ13CDIC, δ15N, and oxygen reconstructions while simulating increased Corg by 510-670 Pg compared with the preindustrial ocean. These results are consistent with the idea that the soft-tissue pump was more efficient

  6. Hepatic zonation of carbon and nitrogen fluxes derived from glutamine and ammonia transformations

    Directory of Open Access Journals (Sweden)

    Constantin Jorgete

    2010-01-01

    Full Text Available Abstract Background Glutaminase predominates in periportal hepatocytes and it has been proposed that it determines the glutamine-derived nitrogen flow through the urea cycle. Glutamine-derived urea production should, thus, be considerably faster in periportal hepatocytes. This postulate, based on indirect observations, has not yet been unequivocally demonstrated, making a direct investigation of ureogenesis from glutamine highly desirable. Methods Zonation of glutamine metabolism was investigated in the bivascularly perfused rat liver with [U-14C]glutamine infusion (0.6 mM into the portal vein (antegrade perfusion or into the hepatic vein (retrograde perfusion. Results Ammonia infusion into the hepatic artery in retrograde and antegrade perfusion allowed to promote glutamine metabolism in the periportal region and in the whole liver parenchyma, respectively. The results revealed that the space-normalized glutamine uptake, indicated by 14CO2 production, gluconeogenesis, lactate production and the associated oxygen uptake, predominates in the periportal region. Periportal predominance was especially pronounced for gluconeogenesis. Ureogenesis, however, tended to be uniformly distributed over the whole liver parenchyma at low ammonia concentrations (up to 1.0 mM; periportal predominance was found only at ammonia concentrations above 1 mM. The proportions between the carbon and nitrogen fluxes in periportal cells are not the same along the liver acinus. Conclusions In conclusion, the results of the present work indicate that the glutaminase activity in periportal hepatocytes is not the rate-controlling step of the glutamine-derived nitrogen flow through the urea cycle. The findings corroborate recent work indicating that ureogenesis is also an important ammonia-detoxifying mechanism in cells situated downstream to the periportal region.

  7. Quinoline based furanones and their nitrogen analogues: Docking, synthesis and biological evaluation

    Directory of Open Access Journals (Sweden)

    Sukhbir Lal Khokra

    2016-11-01

    Full Text Available A small library of twenty-four quinoline based butenolides also known as furanones and their nitrogen analogues was prepared by using two different aroylpropionic acids, viz. 3-(2-naphthoylpropionic acid (3 and 3-(biphenyl-4-ylpropionic acid (4, as starting materials. The 3-aroylpropionic acids were reacted with different 6-substituted-2-chloroquinolin-3-carbaldehydes (2a–d to obtain the corresponding furan-2(3H-ones (5a–h. The purified and characterized furanones were then converted into their corresponding 2(3H-pyrrolones (6a–h and N-benzyl-pyrrol-2(3H-ones (7a–h. The antimicrobial activities of the title compounds were evaluated against two strains of each Gram +ve (Staphylococcus aureus and Bacillus subtilis, Gram −ve bacteria (Escherichia coli and Pseudomonas aeruginosa and against fungal strains of Aspergillus niger and Aspergillus flavus. In vivo anti-inflammatory potential of the title compounds was investigated by standard method. Majority of the compounds showed significant antibacterial activity against both the Gram +ve strains. Eight most potent anti-inflammatory compounds (5b, 5d, 5h, 6b, 7b, 7d, 7f, 7h which exhibited >53% inhibition in edema, were also screened for their in vivo analgesic activity. All the tested compounds were found to have significant reduction in ulcerogenic action but only three compounds (5d, 5h and 7h showed comparable analgesic activity to standard drug, diclofenac. The results were also validated using in silico approach and maximum mol doc score was obtained for compounds 7a–h. On comparing the in vivo and in silico anti-inflammatory results of synthesized compounds, N-benzyl pyrrolones (7a–h emerged as the potent anti-inflammatory agents. It was also observed that compounds that possess electron withdrawing group such as Cl or NO2 are more biologically active.

  8. Impact of the ahas transgene for herbicides resistance on biological nitrogen fixation and yield of soybean.

    Science.gov (United States)

    Hungria, Mariangela; Nakatani, André Shigueyoshi; Souza, Rosinei Aparecida; Sei, Fernando Bonafé; de Oliveira Chueire, Ligia Maria; Arias, Carlos Arrabal

    2015-02-01

    Studies on the effects of transgenes in soybean [Glycine max (L.) Merr.] and the associated use of specific herbicides on biological nitrogen fixation (BNF) are still few, although it is important to ensure minimal impacts on benefits provided by the root-nodule symbiosis. Cultivance CV127 transgenic soybean is a cultivar containing the ahas gene, which confers resistance to herbicides of the imidazolinone group. The aim of this study was to assess the effects of the ahas transgene and of imidazolinone herbicide on BNF parameters and soybean yield. A large-scale set of field experiments was conducted, for three cropping seasons, at nine sites in Brazil, with a total of 20 trials. The experiment was designed as a completely randomized block with four replicates and the following treatments: (T1) near isogenic transgenic soybean (Cultivance CV127) + herbicide of the imidazolinone group (imazapyr); (T2) near isogenic transgenic soybean + conventional herbicides; and (T3) parental conventional soybean (Conquista) + conventional herbicides; in addition, two commercial cultivars were included, Monsoy 8001 (M-SOY 8001) (T4), and Coodetec 217 (CD 217) (T5). At the R2 growth stage, plants were collected and BNF parameters evaluated. In general, there were no effects on BNF parameters due to the transgenic trait or associated with the specific herbicide. Similarly, at the final harvest, no grain-yield effects were detected related to the ahas gene or to the specific herbicide. However, clear effects on BNF and grain yield were attributed to location and cropping season.

  9. STUDIES ON THE CHEMICAL NATURE OF THE SUBSTANCE INDUCING TRANSFORMATION OF PNEUMOCOCCAL TYPES : II. EFFECT OF DESOXYRIBONUCLEASE ON THE BIOLOGICAL ACTIVITY OF THE TRANSFORMING SUBSTANCE.

    Science.gov (United States)

    McCarty, M; Avery, O T

    1946-01-31

    It has been shown that extremely minute amounts of purified preparations of desoxyribonuclease are capable of bringing about the complete and irreversible inactivation of the transforming substance of Pneumococcus Type III. The significance of the effect of the enzyme, and its bearing on the chemical nature of the transforming substance, together with certain considerations concerning the biological specificity of desoxyribonucleic acids in general, are discussed.

  10. Synthesis and biological evaluation of novel steroid-linked nitrogen mustards

    Institute of Scientific and Technical Information of China (English)

    Hua Bing Zhang; Ji Jun Xue; Xiao Long Zhao; De Gang Liu; Ying Li

    2009-01-01

    Two novel steroid-linked nitrogen mustard conjugates 1a and 1b were synthesized by using estrogenic acid 4 coupled with aniline mustard 8 and phenol mustard 13 in an esterification or amidation procedure. Preliminary cytotoxic screening on cancer cell lines in vitro showed that, the steroid-ester linked nitrogen mustard conjugate la exhibited obvious increasing of activities.

  11. Transform method for laser speckle strain-rate measurements in biological tissues and biomaterials

    Science.gov (United States)

    Kirkpatrick, Sean J.

    1999-03-01

    Laser speckle strain measurements in biological tissues and some synthetic biomaterials, such as translucent dental composites and ceramics, are often complicated by the physical properties of the materials. For example, speckles generated by illuminating soft biological tissue with laser light are subject to rapid decorrelation due to the Brownian movement of water and scattering particles in the tissues and to cellular motions. In addition, the penetration of the laser beam into the tissue or translucent biomaterial results in multiple scattering and a complete depolarization of the speckle field. This may complicate the evaluation of the strain field when a force is applied to the material because the speckle pattern shift is providing information from the surface of the material as well as from the bulk sample, where the strains may or may not be the same as on the surface. This paper presents a variation of a speckle processing scheme originally called the `Transform Method' for evaluating both surface and bulk strain rates and total strains in biological tissues and translucent biomaterials. The method is not a correlation-based technique, but instead relies upon 2D frequency transforms of time series of 1D speckle pattern records stacked into 2D arrays. The method is insensitive to speckle field depolarization and, compared to correlation-based techniques, is relatively insensitive to speckle decorrelation. Strain rates and total in-plane strains were measured in both hard (cortical bone) and soft (artery segments) biological tissues and in translucent biomaterials (dental ceramics). Potential applications to medical diagnostics and biomaterials science are also discussed.

  12. Clear felling and burning effects on soil nitrogen transforming bacteria and actinomycetes population in Chittagong University campus, Bangladesh

    Institute of Scientific and Technical Information of China (English)

    S.M.Sirajul Haque; Rahima Ferdoshi; Sohag Miah; M.Nural Anwar

    2012-01-01

    The effect of forests clear felling and associated burning on the population of soil nitrogen transforming bacteria and actinomycetes are reported at three pair sites of Chittagong University campus,Bangladesh in monsoon tropical climate.Clear felled area or burnt site and 15-21 year mixed plantation of native and exotic species,situated side by side on low hill having Typic Dystrochrepts soil was represented at each pair site.At all the three pair sites,clear felled area or burnt site showed very significantly (p≤0.001) lower population of actinomycetes,Rhizobium,Nitrosomonas,Nitrobacter and ammonifying as well as denitrifying bacteria compared to their adjacent mixed plantation.From environmental consideration,this finding has implication in managing natural ecosystem.

  13. Multivariate analysis and determination of the best indirect selection criteria to genetic improvement the biological nitrogen fixation ability in common bean genotypes (Phaseolus vulgaris L.

    Directory of Open Access Journals (Sweden)

    Golparvar Reza Ahmad

    2012-01-01

    Full Text Available In order to determine the best indirect selection criteria for genetic improvement of biological nitrogen fixation, sixty four common bean genotypes were cultivated in two randomized complete block design. Genotypes were inoculated with bacteria Rhizobium legominosarum biovar Phaseoli isolate L-109 only in one of the experiments. The second experiment was considered as check for the first. Correlation analysis showed positive and highly significant correlation of majority of the traits with percent of nitrogen fixation. Step-wise regression designated that traits percent of total nitrogen of shoot, number of nodule per plant and biological yield accounted for 92.3 percent of variation exist in percent of nitrogen fixation. Path analysis indicated that these traits have direct and positive effect on percent of nitrogen fixation. Hence, these traits are promising indirect selection criteria for genetic improvement of nitrogen fixation capability in common bean genotypes especially in early generations.

  14. Soil pH Dynamics and Nitrogen Transformations Under Long-Term Chemical Fertilization in Four Typical Chinese Croplands

    Institute of Scientific and Technical Information of China (English)

    MENG Hong-qi; XU Ming-gang; L Jia-long; HE Xin-hua; LI Jian-wei; SHI Xiao-jun; PENG Chang; WANG Bo-ren; ZHANG Hui-min

    2013-01-01

    Long-term fertilization experiment provides the platform for understanding the proton budgets in nitrogen transformations of agricultural ecosystems. We analyzed the historical (1990-2005) observations on four agricultural long-term experiments in China (Changping, Chongqing, Gongzhuling and Qiyang) under four different fertilizations, i.e., no-fertilizer (control), sole chemical nitrogen fertilizer (FN), sole chemical phosphorous and potassium fertilizers (FPK) and chemical nitrogen, phosphorous and potassium fertilizers (FNPK). The significant decline in topsoil pH was caused not only by chemical N fertilization (0.29 and 0.89∆pH at Gongzhuling and Qiyang, respectively) but also by chemical PK fertilization (0.59∆pH at Gongzhuling). The enhancement of available nutrients in the topsoil due to long-term direct nutrients supply with chemical fertilizers was in the descending order of available P (168-599%)>available K (16-189%)>available N (9-33%). The relative rate of soil pH decline was lower under long-term judicious chemical fertilization (-0.036-0.034 ∆pH yr-1) than that under long-term sole N or PK fertilization (0.016-0.086 ∆pH yr-1). Long-term judicious chemical fertilization with N, P and K elements decreases the nutritional limitation to normal crop growth, under which more N output was distributed in biomass removal rather than the loss via nitrate leaching. We concluded that the N distribution percentage of nitrate leaching to biomass removal might be a suitable indicator to the sensitivity of agricultural ecosystems to acid inputs.

  15. Leaching and Transformation of Nitrogen Fertilizers in Soil After Application of N with Irrigation: A Soil Column Method

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    A soil column method was used to compare the effect of drip fertigation (the application of fertilizer through drip irrigation systems, DFI) on the leaching loss and transformation of urea-N in soil with that of surface fertilization combined with flood irrigation (SFI), and to study the leaching loss and transformation of three kinds of nitrogen fertilizers (nitrate fertilizer, ammonium fertilizer, and urea fertilizer) in two contrasting soils after the fertigation. In comparison to SFI,DFI decreased leaching loss of urea-N from the soil and increased the mineral N (NH4+-N + NO3--N) in the soil. The N leached from a clay loam soil ranged from 5.7% to 9.6% of the total N added as fertilizer, whereas for a sandy loam soil they ranged between 16.2% and 30.4%. Leaching losses of mineral N were higher when nitrate fertilizer was used compared to urea or ammonium fertilizer. Compared to the control (without urea addition), on the first day when soils were fertigated with urea, there were increases in NH4+-N in the soils. This confirmed the rapid hydrolysis of urea in soil during fertigation. NH4+-N in soils reached a peak about 5 days after fertigation, and due to nitrification it began to decrease at day 10. After applying NH4+-N fertilizer and urea and during the incubation period, the mineral nitrogen in the soil decreased. This may be related to the occurrence of NH4+-N fixation or volatilization in the soil during the fertigation process.

  16. Different effects of transgenic maize and nontransgenic maize on nitrogen-transforming archaea and bacteria in tropical soils.

    Science.gov (United States)

    Cotta, Simone Raposo; Dias, Armando Cavalcante Franco; Marriel, Ivanildo Evódio; Andreote, Fernando Dini; Seldin, Lucy; van Elsas, Jan Dirk

    2014-10-01

    The composition of the rhizosphere microbiome is a result of interactions between plant roots, soil, and environmental conditions. The impact of genetic variation in plant species on the composition of the root-associated microbiota remains poorly understood. This study assessed the abundances and structures of nitrogen-transforming (ammonia-oxidizing) archaea and bacteria as well as nitrogen-fixing bacteria driven by genetic modification of their maize host plants. The data show that significant changes in the abundances (revealed by quantitative PCR) of ammonia-oxidizing bacterial and archaeal communities occurred as a result of the maize host being genetically modified. In contrast, the structures of the total communities (determined by PCR-denaturing gradient gel electrophoresis) were mainly driven by factors such as soil type and season and not by plant genotype. Thus, the abundances of ammonia-oxidizing bacterial and archaeal communities but not structures of those communities were revealed to be responsive to changes in maize genotype, allowing the suggestion that community abundances should be explored as candidate bioindicators for monitoring the possible impacts of cultivation of genetically modified plants.

  17. Structural transformations in hull material clad by nitrogen stainless steel using various methods

    Science.gov (United States)

    Sagaradze, V. V.; Kataeva, N. V.; Mushnikova, S. Yu.; Khar'kov, O. A.; Kalinin, G. Yu.; Yampol'skii, V. D.

    2014-02-01

    Specimens of a 10N3KhDMBF shipbuilding hull steel were clad by a 04Kh20N6G11M2AFB nitrogen austenitic steel using various treatment conditions, which included hot rolling, austenitic facing, and explosive welding followed by hot rolling and heat treatment. Between the base and cladding materials, an intermediate layer with variable concentrations of chromium, manganese, and nickel was found, in which a martensitic structure was formed. In all the cases, the strength of bonding of the cladding layer to the hull steel (determined in tests for shear to fracture) was fairly high (σsh = 437-520 MPa). The only exception was the specimen produced by unidirectional facing without subsequent hot rolling (σsh = 308 MPa), in which nonfusions between the faced beads of stainless steel were detected.

  18. A sequencing batch reactor system for high-level biological nitrogen and phosphorus removal from abattoir wastewater.

    Science.gov (United States)

    Lemaire, Romain; Yuan, Zhiguo; Bernet, Nicolas; Marcos, Marcelino; Yilmaz, Gulsum; Keller, Jürg

    2009-06-01

    A sequencing batch reactor (SBR) system is demonstrated to biologically remove nitrogen, phosphorus and chemical oxygen demand (COD) to very low levels from abattoir wastewater. Each 6 h cycle contained three anoxic/anaerobic and aerobic sub-cycles with wastewater fed at the beginning of each anoxic/anaerobic period. The step-feed strategy was applied to avoid high-level build-up of nitrate or nitrite during nitrification, and therefore to facilitate the creation of anaerobic conditions required for biological phosphorus removal. A high degree removal of total phosphorus (>98%), total nitrogen (>97%) and total COD (>95%) was consistently and reliably achieved after a 3-month start-up period. The concentrations of total phosphate and inorganic nitrogen in the effluent were consistently lower than 0.2 mg P l(-1) and 8 mg N l(-1), respectively. Fluorescence in situ hybridization revealed that the sludge was enriched in Accumulibacter spp. (20-40%), a known polyphosphate accumulating organism, whereas the known glycogen accumulating organisms were almost absent. The SBR received two streams of abattoir wastewater, namely the effluent from a full-scale anaerobic pond (75%) and the effluent from a lab-scale high-rate pre-fermentor (25%), both receiving raw abattoir wastewater as feed. The pond effluent contained approximately 250 mg N l(-1) total nitrogen and 40 mg P l(-1) of total phosphorus, but relatively low levels of soluble COD (around 500 mg l(-1)). The high-rate lab-scale pre-fermentor, operated at 37 degrees C and with a sludge retention time of 1 day, proved to be a cheap and effective method for providing supplementary volatile fatty acids allowing for high-degree of biological nutrient removal from abattoir wastewater.

  19. History on the biological nitrogen fixation research in graminaceous plants: special emphasis on the Brazilian experience

    Directory of Open Access Journals (Sweden)

    José I. Baldani

    2005-09-01

    Full Text Available This review covers the history on Biological Nitrogen Fixation (BNF in Graminaceous plants grown in Brazil, and describes research progress made over the last 40 years, most of whichwas coordinated by Johanna Döbereiner. One notable accomplishment during this period was the discovery of several nitrogen-fixing bacteria such as the rhizospheric (Beijerinckia fluminensis and Azotobacter paspali, associative (Azospirillum lipoferum, A. brasilense, A. amazonense and the endophytic (Herbaspirillum seropedicae, H. rubrisubalbicans, Gluconacetobacter diazotrophicus, Burkholderia brasilensis and B. tropica. The role of these diazotrophs in association with grasses, mainly with cereal plants, has been studied and a lot of progress has been achieved in the ecological, physiological, biochemical, and genetic aspects. The mechanisms of colonization and infection of the plant tissues are better understood, and the BNF contribution to the soil/plant system has been determined. Inoculation studies with diazotrophs showed that endophytic bacteria have a much higher BNF contribution potential than associative diazotrophs. In addition, it was found that the plant genotype influences the plant/bacteria association. Recent data suggest that more studies should be conducted on the endophytic association to strengthen the BNF potential. The ongoing genome sequencing programs: RIOGENE (Gluconacetobacter diazotrophicus and GENOPAR (Herbaspirillum seropedicae reflect the commitment to the BNF study in Brazil and should allow the country to continue in the forefront of research related to the BNF process in Graminaceous plants.A presente revisão aborda a história da Fixação Biológica de Nitrogênio (FBN em Gramíneas no Brasil, procurando mostrar a evolução da pesquisa na área iniciada a mais de 40 anos sob a liderança da pesquisadora Johanna Döbereiner. Um aspecto marcante deste período foi a descoberta de diversas bactérias fixadoras de nitrogênio atmosf

  20. EnviroAtlas - Biological nitrogen fixation in natural/semi-natural ecosystems by 12-digit HUC for the Conterminous United States, 2006

    Data.gov (United States)

    U.S. Environmental Protection Agency — This EnviroAtlas dataset contains data on the mean biological nitrogen fixation in natural/semi-natural ecosystems per 12-digit Hydrologic Unit (HUC) in 2006....

  1. Transformation pathways in high-pressure solid nitrogen: from molecular N$_2$ to polymeric cg-N

    CERN Document Server

    Plašienka, Dusan

    2014-01-01

    The transition pathway in high-pressure solid nitrogen from N$_2$ molecular state to polymeric cg-N phase was investigated by means of \\textit{ab initio} molecular dynamics and metadynamics simulations. In our study, we observed a transformation mechanism from molecular $Immm$ phase initiated by formation of $trans$-$cis$ chains. These chains further connected within layers and formed a chain-planar state, which we describe as a mixture of crystalline $trans$-$cis$ chain phase and $planar$ phase (both with $Pnma$ symmetry). This form appeared in molecular dynamics performed at 120 GPa and 1500 K and also in metadynamics run at 110 GPa and 1500 K, in which the chains continued to reorganize further and finally formed cg-N. During various other metadynamics runs, two different phases emerged - molecular $P2_1/c$ and two-three-coordinated chain-like $Cm$. The transformation mechanism leading to cg-N may be characterized as a progressive polymerization process passing throughout several intermediate states of var...

  2. Persistence of biological nitrogen fixation in high latitude grass-clover grasslands under different management practices

    Science.gov (United States)

    Tzanakakis, Vasileios; Sturite, Ievina; Dörsch, Peter

    2016-04-01

    Biological nitrogen fixation (BNF) can substantially contribute to N supply in permanent grasslands, improving N yield and forage quality, while reducing inorganic N inputs. Among the factors critical to the performance of BNF in grass-legume mixtures are selected grass and legume species, proportion of legumes, the soil-climatic conditions, in particular winter conditions, and management practices (e.g. fertilization and compaction). In high latitude grasslands, low temperatures can reduce the performance of BNF by hampering the legumés growth and by suppressing N2 fixation. Estimation of BNF in field experiments is not straightforward. Different methods have been developed providing different results. In the present study, we evaluated the performance of BNF, in a newly established field experiment in North Norway over four years. The grassland consisted of white clover (Trifolium repens L.) and red clover (Trifolium pretense L.) sawn in three proportions (0, 15 and 30% in total) together with timothy (Pheum pretense L.) and meadow fescue (Festuca pratensis L.). Three levels of compaction were applied each year (no tractor, light tractor, heavy tractor) together with two different N rates (110 kg N/ha as cattle slurry or 170 kg N/ha as cattle slurry and inorganic N fertilizer). We applied two different methods, the 15N natural abundance and the difference method, to estimate BNF in the first harvest of each year. Overall, the difference method overestimated BNF relative to the 15N natural abundance method. BNF in the first harvest was compared to winter survival of red and white clover plants, which decreased with increasing age of the grassland. However, winter conditions did not seem to affect the grassland's ability to fix N in spring. The fraction of N derived from the atmosphere (NdfA) in white and red clover was close to 100% in each spring, indicating no suppression of BNF. BNF increased the total N yield of the grasslands by up to 75%, mainly due to high

  3. Evaluation of Natural Materials as Exogenous Carbon Sources for Biological Treatment of Low Carbon-to-Nitrogen Wastewater

    Science.gov (United States)

    Ramírez-Godínez, Juan; Beltrán-Hernández, Icela; Álvarez-Hernández, Alejandro; Coronel-Olivares, Claudia; Contreras-López, Elizabeth; Quezada-Cruz, Maribel; Vázquez-Rodríguez, Gabriela

    2015-01-01

    In the bacterial processes involved in the mitigation of nitrogen pollution, an adequately high carbon-to-nitrogen (C : N) ratio is key to sustain denitrification. We evaluated three natural materials (woodchips, barley grains, and peanut shells) as carbon sources for low C : N wastewater. The amount of organic matter released from these materials to aqueous media was evaluated, as well as their pollution swapping potential by measuring the release of total Kjeldahl nitrogen, N-NH4+, NO2−, and NO3−, and total phosphorous. Barley grains yielded the highest amount of organic matter, which also showed to be the most easily biodegradable. Woodchips and peanut shells released carbon rather steadily and so they would not require frequent replenishment from biological reactors. These materials produced eluates with lower concentrations of nutrients than the leachates from barley grains. However, as woodchips yielded lower amounts of suspended solids, they constitute an adequate exogenous source for the biological treatment of carbon-deficient effluents. PMID:26495313

  4. The efficiency of biological aerobic treatment of piggery wastewater to control nitrogen, phosphorus, pathogen and gas emissions.

    Science.gov (United States)

    Béline, F; Daumer, M L; Loyon, L; Pourcher, A M; Dabert, P; Guiziou, F; Peu, P

    2008-01-01

    Due to the water pollution and in order to reduce the nitrogen load applied on soils, biological nitrogen removal treatment of piggery wastewaters was developed in Brittany (France), with 250-300 units running. Four types of treatment processes were built including a biological reactor allowing to remove about 60-70% of the nitrogen content as gas by nitrification/denitrification. The addition of different mechanical separators (screw-press, centrifuge decanter ...) led to concentration of phosphorus in an exportable solid phase, allowing a reduction up to 80% of the phosphorus applied locally on soils. Moreover, a reduction of the gaseous emissions was observed using this management process as compared to conventional management (storage + land spreading) including ammonia (up to 68%) and greenhouse gases (55%). Finally, the level of enteric and pathogenic bacteria was also decreased with the treatment process as compared to conventional management systems. However, in spite of these results, the significant cost of the treatment must be underlined and alternative systems including anaerobic digestion will have to be studied.

  5. Detecting change in biological rhythms: a multivariate permutation test approach to Fourier-transformed data.

    Science.gov (United States)

    Blackford, Jennifer Urbano; Salomon, Ronald M; Waller, Niels G

    2009-02-01

    Treatment-related changes in neurobiological rhythms are of increasing interest to psychologists, psychiatrists, and biological rhythms researchers. New methods for analyzing change in rhythms are needed, as most common methods disregard the rich complexity of biological processes. Large time series data sets reflect the intricacies of underlying neurobiological processes, but can be difficult to analyze. We propose the use of Fourier methods with multivariate permutation test (MPT) methods for analyzing change in rhythms from time series data. To validate the use of MPT for Fourier-transformed data, we performed Monte Carlo simulations and compared statistical power and family-wise error for MPT to Bonferroni-corrected and uncorrected methods. Results show that MPT provides greater statistical power than Bonferroni-corrected tests, while appropriately controlling family-wise error. We applied this method to human, pre- and post-treatment, serially-sampled neurotransmitter data to confirm the utility of this method using real data. Together, Fourier with MPT methods provides a statistically powerful approach for detecting change in biological rhythms from time series data.

  6. Fungal endophyte Phomopsis liquidambari affects nitrogen transformation processes and related microorganisms in the rice rhizosphere

    Directory of Open Access Journals (Sweden)

    Bo eYang

    2015-09-01

    Full Text Available The endophytic fungus Phomopsis liquidambari performs an important ecosystem service by assisting its host with acquiring soil nitrogen (N, but little is known regarding how this fungus influences soil N nutrient properties and microbial communities. In this study, we investigated the impact of P. liquidambari on N dynamics,the abundance and composition of N cycling genes in rhizosphere soil treated with three levels of N (urea. Ammonia-oxidizing archaea (AOA, ammonia-oxidizing bacteria (AOB and diazotrophs were assayed using quantitative real-time polymerase chain reaction and denaturing gradient gel electrophoresis at four rice growing stages (S0: before planting, S1: tillering stage, S2: grain filling stage, and S3: ripening stage. A significant increase in the available nitrate and ammonium contents was found in the rhizosphere soil of endophyte-infected rice under low N conditions. Moreover, P. liquidambari significantly increased the potential nitrification rates (PNR, affected the abundance and community structure of AOA, AOB and diazotrophs under low N conditions in the S1 and S2 stages. The root exudates were determined due to their important role in rhizosphere interactions. P. liquidambari colonization altered the exudation of organic compounds by rice roots and P. liquidambari increased the concentration of soluble saccharides, total free amino acids and organic acids

  7. Blending materials composed of boron, nitrogen and carbon to transform approaches to liquid hydrogen stores

    Energy Technology Data Exchange (ETDEWEB)

    Whittemore, Sean M.; Bowden, Mark; Karkamkar, Abhijeet; Parab, Kshitij; Neiner, Doinita; Autrey, Tom; Ishibashi, Jacob S. A.; Chen, Gang; Liu, Shih-Yuan; Dixon, David A.

    2015-12-02

    Energy storage remains a key challenge for the advancement of fuel cell applications. Because of this, hydrogen has garnered much research attention for its potential as an energy carrier. This can be attributed to its abundance from non-petroleum sources, and its energy conversion efficiency. Our group, among others, has been studying the use of ammonia borane as a chemical hydrogen storage material for the past several years. Ammonia borane (AB, NH3BH3), a solid state complex composed of the light weight main group elements of nitrogen and boron, is isoelectronic with ethane and as such is an attractive hydrogen storage material with a high gravimetric capacity of H2 (19.6 wt%). However, the widespread use of AB as a chemical hydrogen storage material has been stalled by some undesirable properties and reactivity. Most notably, AB is a solid and this presents compatibility issues with the existing liquid fuel infrastructure. The thermal release of H2 from AB also results in the formation of volatile impurities (borazine and ammonia) that are detrimental to operation of the fuel cell. Additionally, the major products in the spent fuel are polyborazylene and amine borane oligomers that present challenges in regenerating AB. This research was funded by the U.S. Department of Energy, Office of Energy Efficiency and Renewable Energy. The Pacific Northwest National Laboratory is operated by Battelle for DOE.

  8. [Hyper spectral estimation method for soil alkali hydrolysable nitrogen content based on discrete wavelet transform and genetic algorithm in combining with partial least squares DWT-GA-PLS)].

    Science.gov (United States)

    Chen, Hong-Yan; Zhao, Geng-Xing; Li, Xi-Can; Wang, Xiang-Feng; Li, Yu-Ling

    2013-11-01

    Taking the Qihe County in Shandong Province of East China as the study area, soil samples were collected from the field, and based on the hyperspectral reflectance measurement of the soil samples and the transformation with the first deviation, the spectra were denoised and compressed by discrete wavelet transform (DWT), the variables for the soil alkali hydrolysable nitrogen quantitative estimation models were selected by genetic algorithms (GA), and the estimation models for the soil alkali hydrolysable nitrogen content were built by using partial least squares (PLS) regression. The discrete wavelet transform and genetic algorithm in combining with partial least squares (DWT-GA-PLS) could not only compress the spectrum variables and reduce the model variables, but also improve the quantitative estimation accuracy of soil alkali hydrolysable nitrogen content. Based on the 1-2 levels low frequency coefficients of discrete wavelet transform, and under the condition of large scale decrement of spectrum variables, the calibration models could achieve the higher or the same prediction accuracy as the soil full spectra. The model based on the second level low frequency coefficients had the highest precision, with the model predicting R2 being 0.85, the RMSE being 8.11 mg x kg(-1), and RPD being 2.53, indicating the effectiveness of DWT-GA-PLS method in estimating soil alkali hydrolysable nitrogen content.

  9. The role of macrosymbiont genotypes and earthworms in the enrichment of soil with biological nitrogen

    Science.gov (United States)

    Nazaryuk, V. M.; Kalimullina, F. R.; Klenova, M. I.

    2010-06-01

    The specific features of the symbiotic apparatus and the accumulation of the plant biomass under the influence of different genotypes of peas ( Pisum sativum L.) on gray forest soils were studied in field conditions. With the alternation of legume and grass cultures, the genotypes of plants with supernodulation were found to affect the microbial nitrogen content in the soil to a greater extent than the concentration of ammonium and nitrate nitrogen. For the growing period, the N content in the microbial biomass increased, on the average, by 1.3 to 1.5 times. The consumption of nitrogen by the plants of the supernodular mutant K-301a was found to be 2.6 and 3.0 times greater than that by the pea plants of the Ramonskii-77 variety and of the K-562a line, respectively. During the after effect of the symbiotically bound air nitrogen, a significant uptake of this element was observed only by the oat plants grown after the K-56 2a. The nitrogen fixation by these plants was 1.3 times more active than that by the peas of the Ramonskii-77 variety. The importance of earthworms (Lumbricidae) and plant residues of different genotypes for the processes of mineralization of organic compounds and accumulation of ammonium, nitrate, and microbial nitrogen in the soils under optimal hydrothermal conditions was revealed. In the experiment, two maximums of the CO2 emission were recorded; they may be related to the periodic production of organic mass by the earthworms and the creation of favorable conditions for microbial activity by them. The accumulation of nitrate nitrogen (up to 150 mg/kg) in the soil was the greatest owing to the interaction between the earthworms and the residues of the supernodular K-301a mutant.

  10. Dual nitrate isotopes clarify the role of biological processing and hydrologic flow paths on nitrogen cycling in subtropical low-gradient watersheds

    Science.gov (United States)

    Griffiths, Natalie A.; Jackson, C. Rhett; McDonnell, Jeffrey J.; Klaus, Julian; Du, Enhao; Bitew, Menberu M.

    2016-02-01

    Nitrogen (N) is an important nutrient as it often limits productivity but in excess can impair water quality. Most studies on watershed N cycling have occurred in upland forested catchments where snowmelt dominates N export; fewer studies have focused on low-relief watersheds that lack snow. We examined watershed N cycling in three adjacent, low-relief watersheds in the Upper Coastal Plain of the southeastern United States to better understand the role of hydrological flow paths and biological transformations of N at the watershed scale. Groundwater was the dominant source of nitrified N to stream water in two of the three watersheds, while atmospheric deposition comprised 28% of stream water nitrate in one watershed. The greater atmospheric contribution may have been due to the larger stream channel area relative to total watershed area or the dominance of shallow subsurface flow paths contributing to stream flow in this watershed. There was a positive relationship between temperature and stream water ammonium concentrations and a negative relationship between temperature and stream water nitrate concentrations in each watershed suggesting that N cycling processes (i.e., nitrification and denitrification) varied seasonally. However, there were no clear patterns in the importance of denitrification in different water pools possibly because a variety of factors (i.e., assimilatory uptake, dissimilatory uptake, and mixing) affected nitrate concentrations. Together, these results highlight the hydrological and biological controls on N cycling in low-gradient watersheds and variability in N delivery flow paths among adjacent watersheds with similar physical characteristics.

  11. 污废水生物脱氮除磷技术研究进展%Research Status of Technologies for Nitrogen and Phosphorus Removal by Biological Processes

    Institute of Scientific and Technical Information of China (English)

    刘启承

    2013-01-01

      总结了目前城市污水生物脱氮除磷技术研究及应用进展,分析了脱氮除磷工艺机理及其特点,探讨了城市污水生物脱氮除磷工艺深入研究的方向。%This paper reviews the advances in the biological nitrogen and phosphorus removal technologies for municipal wastewater .The mechanism and characteristics of nitrogen and phosphorus removal processes are analyzed , and directions of studying the biological nitrogen and phosphorus removal technologies are also discussed .

  12. The response of Chlamydomonas reinhardtii to nitrogen deprivation: a systems biology analysis.

    Science.gov (United States)

    Park, Jeong-Jin; Wang, Hongxia; Gargouri, Mahmoud; Deshpande, Rahul R; Skepper, Jeremy N; Holguin, F Omar; Juergens, Matthew T; Shachar-Hill, Yair; Hicks, Leslie M; Gang, David R

    2015-02-01

    Drastic alteration in macronutrients causes large changes in gene expression in the photosynthetic unicellular alga Chlamydomonas reinhardtii. Preliminary data suggested that cells follow a biphasic response to this change hinging on the initiation of lipid accumulation, and we hypothesized that drastic repatterning of metabolism also followed this biphasic modality. To test this hypothesis, transcriptomic, proteomic, and metabolite changes that occur under nitrogen (N) deprivation were analyzed. Eight sampling times were selected covering the progressive slowing of growth and induction of oil synthesis between 4 and 6 h after N deprivation. Results of the combined, systems-level investigation indicated that C. reinhardtii cells sense and respond on a large scale within 30 min to a switch to N-deprived conditions turning on a largely gluconeogenic metabolic state, which then transitions to a glycolytic stage between 4 and 6 h after N depletion. This nitrogen-sensing system is transduced to carbon- and nitrogen-responsive pathways, leading to down-regulation of carbon assimilation and chlorophyll biosynthesis, and an increase in nitrogen metabolism and lipid biosynthesis. For example, the expression of nearly all the enzymes for assimilating nitrogen from ammonium, nitrate, nitrite, urea, formamide/acetamide, purines, pyrimidines, polyamines, amino acids and proteins increased significantly. Although arginine biosynthesis enzymes were also rapidly up-regulated, arginine pool size changes and isotopic labeling results indicated no increased flux through this pathway.

  13. BIOLOGICAL NITROGEN FIXATION AND NUTRIENT RELEASE FROM LITTER OF THE GUACHAPELE LEGUMINOUS TREE UNDER PURE AND MIXED PLANTATION WITH EUCALYPTUS

    Directory of Open Access Journals (Sweden)

    Fabiano de Carvalho Balieiro

    2008-09-01

    Full Text Available Pseudosamanea guachapele (guachapele, a nitrogen fixing leguminous tree, is an alternative for mixed forest plantations in the tropics. As little information is available for guachapele (Mimosoideae in mixed plantation with eucalyptus considering the Brazilian edaphoclimatic conditions, an experiment was carried out to evaluate the contribution of biological nitrogen fixation to guachapele and leaf litter decomposition rates and nutrient release of eucalyptus and guachapele residues (pure and mixed. The percentage of nitrogen derived from atmospheric N2 (% Ndfa was estimated by comparing the natural 15N abundance (15N, ‰ in guachapele tissues with that of Eucalyptus grandis, a non-nitrogen fixing species, both with seven years after planting. Decomposition constants (k and litter half-lives (t1/2 were estimated by fitting a single exponential model to litter bag data. The estimation of %Ndfa for guachapele in pure stand fell within a narrower range (17-36 % in relation to mixed conditions (35-60 %. Nitrogen concentration in leaf litter was positively related to the decomposition rate, decreasing from pure guachapele to pure eucalyptus. Half-lives (t1/2 were significantly different (p < 0.05 among residues with 148, 185 and 218 days, for guachapele leaves, mixture of both species and for pure eucalyptus, respectively. Nutrient release rates followed the same sequence of t1/2 due to the initial residues quality (mainly N. It was observed that a fast release of N, K and Mg occurred from the residues tested, mainly for guachapele and mixed stand. These results indicate that guachapele could benefit the mixed system from the N addition and a faster decomposition rate of a richer litter.

  14. TRANSFORMATION

    Energy Technology Data Exchange (ETDEWEB)

    LACKS,S.A.

    2003-10-09

    Transformation, which alters the genetic makeup of an individual, is a concept that intrigues the human imagination. In Streptococcus pneumoniae such transformation was first demonstrated. Perhaps our fascination with genetics derived from our ancestors observing their own progeny, with its retention and assortment of parental traits, but such interest must have been accelerated after the dawn of agriculture. It was in pea plants that Gregor Mendel in the late 1800s examined inherited traits and found them to be determined by physical elements, or genes, passed from parents to progeny. In our day, the material basis of these genetic determinants was revealed to be DNA by the lowly bacteria, in particular, the pneumococcus. For this species, transformation by free DNA is a sexual process that enables cells to sport new combinations of genes and traits. Genetic transformation of the type found in S. pneumoniae occurs naturally in many species of bacteria (70), but, initially only a few other transformable species were found, namely, Haemophilus influenzae, Neisseria meningitides, Neisseria gonorrheae, and Bacillus subtilis (96). Natural transformation, which requires a set of genes evolved for the purpose, contrasts with artificial transformation, which is accomplished by shocking cells either electrically, as in electroporation, or by ionic and temperature shifts. Although such artificial treatments can introduce very small amounts of DNA into virtually any type of cell, the amounts introduced by natural transformation are a million-fold greater, and S. pneumoniae can take up as much as 10% of its cellular DNA content (40).

  15. Transformation

    DEFF Research Database (Denmark)

    Peters, Terri

    2011-01-01

    Artiklen diskuterer ordet "transformation" med udgangspunkt i dels hvorledes ordet bruges i arkitektfaglig terminologi og dels med fokus på ordets potentielle indhold og egnethed i samme teminologi.......Artiklen diskuterer ordet "transformation" med udgangspunkt i dels hvorledes ordet bruges i arkitektfaglig terminologi og dels med fokus på ordets potentielle indhold og egnethed i samme teminologi....

  16. A Combined System for Biological Removal of Nitrogen and Carbon from Nylon-6 Production Wastewater

    Institute of Scientific and Technical Information of China (English)

    LIU Fang; LIU Guo-hua; TIAN Qing; ZHANG Man; CHEN Ji-hua

    2007-01-01

    A combined system consisting of hydrolysisacidification, denitrification and nitrification reactors wasused to remove carbon and nitrogen from the nylon - 6production wastewater, which was characterized by goodbiodegradability and high nitrogen concentration. Theinfluences of Chemical Oxygen Demand(COD) in theinfluent, recirculation ratio, Hydraulic Residence Time(HRT) and Dissolved Oxygen(DO) concentration on thesystem performances were investigated. From results itcould be seen that good performances have been achievedduring the overall experiments periods, and COD, TotalNitrogen(TN), NH+-N and Suspended Solids(SS) in theeffluent were 53, 16, 2 and 24 mg·L-1, respectively,which has satisfied the first standard of wastewaterdischarge established by Environmental Protection Agency(EPA) of China. Furthermore, results showed thatoperation factors, viz. COD in the influent, recirculationratio, HRT and DO concentration, all had importantinfluences on the system performances.

  17. In vitro activity of NifL, a signal transduction protein for biological nitrogen fixation.

    OpenAIRE

    Lee, H S; Narberhaus, F; Kustu, S

    1993-01-01

    In the free-living diazotroph Klebsiella pneumoniae, the NifA protein is required for transcription of all nif (nitrogen fixation) operons except the regulatory nifLA operon itself. NifA activates transcription of nif operons by the alternative holoenzyme form of RNA polymerase, sigma 54 holoenzyme. In vivo, NifL is known to antagonize the action of NifA in the presence of molecular oxygen or combined nitrogen. We now demonstrate inhibition by NifL in vitro in both a coupled transcription-tra...

  18. Extremely low-frequency magnetic fields of transformers and possible biological and health effects.

    Science.gov (United States)

    Sirav, Bahriye; Sezgin, Gaye; Seyhan, Nesrin

    2014-12-01

    Physiological processes in organisms can be influenced by extremely low-frequency (ELF) electromagnetic energy. Biological effect studies have great importance; as well as measurement studies since they provide information on the real exposure situations. In this study, the leakage magnetic fields around a transformer were measured in an apartment building in Küçükçekmece, Istanbul, and the measurement results were evaluated with respect to the international exposure standards. The transformer station was on the bottom floor of a three-floor building. It was found that people living and working in the building were exposed to ELF magnetic fields higher than the threshold magnetic field value of the International Agency for Research on Cancer (IARC). Many people living in this building reported health complaints such as immunological problems of their children. There were child-workers working in the textile factories located in the building. Safe distances or areas for these people should be recommended. Protective measures could be implemented to minimize these exposures. Further residential exposure studies are needed to demonstrate the exposure levels of ELF magnetic fields. Precautions should, therefore, be taken either to reduce leakage or minimize the exposed fields. Shielding techniques should be used to minimize the leakage magnetic fields in such cases.

  19. Effects of transforming growth interacting factor on biological behaviors of gastric carcinoma cells

    Institute of Scientific and Technical Information of China (English)

    Zhong-Liang Hu; Ji-Fang Wen; De-Sheng Xiao; Hui Zhen; Chun-Yan Fu

    2005-01-01

    AIM:Transforming growth interacting factor (TGIF) is an inhibitor of both transforming growth factor β (TGF-β) and retinoid signaling pathways. Moreover, the activation of MAPK pathway can prolong its half-life. However, its role in carcinogenesis is still unknown. Thus we attempted to investigate the effect of TGIF on biologic behaviors of gastric carcinoma cells.METHODS: Gastric carcinoma cell line, SGC-7901, was stably transfected with plasmid PcDNA3.1-TGIF. Western blotting and cell immunohistochemistry screening for the highly expressing clone of TGIF were employed. The growth of transfected cells was investigated by MTT and colonyformation assays, and apoptosis was measured by flow cytometry (FCM) and transmission electron microscopy.Tumorigenicity of the transfectant cells was also analyzed.RESULTS: TGIF had no effect on the proliferation, cell cycle and apoptosis of SGC-7901 cells, but cellular organelles of cells transfected with TGIF were richer than those of vector control or parental cells. Its clones were smaller than the control ones in plate efficiency, and its tumor tissues also had no obvious necrosis compared with the vector control or parental cells. Moreover, TGIF could resist TGF-β mediated growth inhibition.CONCLUSION: TGIF may induce differentiation of stomach neoplastic cells. In addition, TGIF can counteract the growth inhibition induced by TGF-β.

  20. Ureic nitrogen transformation in multi-layer soil columns treated with urease and nitrification inhibitors.

    Science.gov (United States)

    Giovannini, Camilla; Garcia-Mina, Josè M; Ciavatta, Claudio; Marzadori, Claudio

    2009-06-10

    The use of N-(n-butyl)thiophosphoric triamide (NBPT), as a urease inhibitor, is one of the most successful strategies utilized to increase the efficiency of urea-based fertilization. To date, NBPT has been added to the soil incorporated in fertilizers containing either urea or the inhibitor at a fixed percentage on the urea weight. The possibility of using NBPT physically separated from urea-based fertilizers could make its use more flexible. In particular, a granulated product containing NBPT could be utilized in soils treated with different urea-based fertilizers including livestock urine, the amount depending on soil characteristics and/or the urea source (e.g., mineral fertilizer, organo-mineral fertilizer, or animal slurry). In this study, a multilayer soil column device was used to investigate the influence of an experimental granular product (RV) containing NBPT and a garlic extract, combining the ability to protect NBPT by oxidation and nitrification inhibition activity, on (a) spatial variability of soil urease and nitrification activities and (b) timing of urea hydrolysis and mineral-N form accumulation (NO(2)(-), NO(3)(-), NH(4)(+)) in soil treated with urea. The results clearly demonstrated that RV can, effectively, inhibit the soil urease activity along the soil column profile up to 8-10 cm soil layer depth and that the inhibition power of RV was dependent on time and soil depth. However, nitrification activity is not significantly influenced by RV addition. In addition, the soil N transformations were clearly affected by RV; in fact, RV retarded urea hydrolysis and reduced the accumulation of NH(4)(+)-N and NO(2)(-)-N ions along the soil profile. The RV product was demonstrated to be an innovative additive able to modify some key ureic N trasformation processes correlated with the efficiency of the urea-based fertilization, in a soil column higher than 10 cm.

  1. Emerging nitrogenous disinfection byproducts: Transformation of the antidiabetic drug metformin during chlorine disinfection of water.

    Science.gov (United States)

    Armbruster, Dominic; Happel, Oliver; Scheurer, Marco; Harms, Klaus; Schmidt, Torsten C; Brauch, Heinz-Jürgen

    2015-08-01

    As an environmental contaminant of anthropogenic origin metformin is present in the high ng/L- up to the low μg/L-range in most surface waters. Residues of metformin may lead to the formation of disinfection by-products during chlorine disinfection, when these waters are used for drinking water production. Investigations on the underlying chemical processes occurring during treatment of metformin with sodium hypochlorite in aqueous medium led to the discovery of two hitherto unknown transformation products. Both substances were isolated and characterized by HPLC-DAD, GC-MS, HPLC-ESI-TOF, (1)H-NMR and single-crystal X-ray structure determination. The immediate major chlorination product is a cyclic dehydro-1,2,4-triazole-derivate of intense yellow color (Y; C4H6ClN5). It is a solid chlorimine of limited stability. Rapid formation was observed between 10 °C and 30 °C, as well as between pH 3 and pH 11, in both ultrapure and tap water, even at trace quantities of reactants (ng/L-range for metformin, mg/L-range for free chlorine). While Y is degraded within a few hours to days in the presence of light, elevated temperature, organic solvents and matrix constituents within tap water, a secondary degradation product was discovered, which is stable and colorless (C; C4H6ClN3). This chloroorganic nitrile has a low photolysis rate in ambient day light, while being resistant to heat and not readily degraded in the presence of organic solvents or in the tap water matrix. In addition, the formation of ammonia, dimethylamine and N,N-dimethylguanidine was verified by cation exchange chromatography.

  2. TRANSFORMER

    Science.gov (United States)

    Baker, W.R.

    1959-08-25

    Transformers of a type adapted for use with extreme high power vacuum tubes where current requirements may be of the order of 2,000 to 200,000 amperes are described. The transformer casing has the form of a re-entrant section being extended through an opening in one end of the cylinder to form a coaxial terminal arrangement. A toroidal multi-turn primary winding is disposed within the casing in coaxial relationship therein. In a second embodiment, means are provided for forming the casing as a multi-turn secondary. The transformer is characterized by minimized resistance heating, minimized external magnetic flux, and an economical construction.

  3. The Design and Transformation of Biofundamentals: A Nonsurvey Introductory Evolutionary and Molecular Biology Course.

    Science.gov (United States)

    Klymkowsky, Michael W; Rentsch, Jeremy D; Begovic, Emina; Cooper, Melanie M

    2016-01-01

    Many introductory biology courses amount to superficial surveys of disconnected topics. Often, foundational observations and the concepts derived from them and students' ability to use these ideas appropriately are overlooked, leading to unrealistic expectations and unrecognized learning obstacles. The result can be a focus on memorization at the expense of the development of a meaningful framework within which to consider biological phenomena. About a decade ago, we began a reconsideration of what an introductory course should present to students and the skills they need to master. The original Web-based course's design presaged many of the recommendations of the Vision and Change report; in particular, a focus on social evolutionary mechanisms, stochastic (evolutionary and molecular) processes, and core ideas (cellular continuity, evolutionary homology, molecular interactions, coupled chemical reactions, and molecular machines). Inspired by insights from the Chemistry, Life, the Universe & Everything general chemistry project, we transformed the original Web version into a (freely available) book with a more unified narrative flow and a set of formative assessments delivered through the beSocratic system. We outline how student responses to course materials are guiding future course modifications, in particular a more concerted effort at helping students to construct logical, empirically based arguments, explanations, and models.

  4. Control of a Biological Nitrogen Removal Process in an Intensified Single Reactor Configuration

    DEFF Research Database (Denmark)

    Vangsgaard, Anna Katrine; Mauricio Iglesias, Miguel; Gernaey, Krist;

    2013-01-01

    The nitrogen removing granular sludge process is a novel and intensified process. However, its stable operation and control remains a challenging problem. In this contribution, a new process oriented approach is used to develop, evaluate and benchmark control strategies to ensure stable operation...

  5. Nitrogen and Phosphorus in Water, An Annotated Selected Bibliography of Their Biological Effects.

    Science.gov (United States)

    Mackenthun, Kenneth M.

    Included in this bibliography are annotations of quantitative data on the content or concentration of nitrogen and phosphorus in plants and animals, the contribution to water of these elements from various sources (soil, fertilizers, excretion, sewage, precipitation, urban run-off), and the effect their presence has on aquatic standing crops and…

  6. Modeling Nitrous Oxide Production during Biological Nitrogen Removal via Nitrification and Denitrification: Extensions to the General ASM Models

    DEFF Research Database (Denmark)

    Ni, Bing-Jie; Ruscalleda, Maël; Pellicer i Nàcher, Carles

    2011-01-01

    Nitrous oxide (N2O) can be formed during biological nitrogen (N) removal processes. In this work, a mathematical model is developed that describes N2O production and consumption during activated sludge nitrification and denitrification. The well-known ASM process models are extended to capture N2O...... dynamics during both nitrification and denitrification in biological N removal. Six additional processes and three additional reactants, all involved in known biochemical reactions, have been added. The validity and applicability of the model is demonstrated by comparing simulations with experimental data...... on N2O production from four different mixed culture nitrification and denitrification reactor study reports. Modeling results confirm that hydroxylamine oxidation by ammonium oxidizers (AOB) occurs 10 times slower when NO2– participates as final electron acceptor compared to the oxic pathway. Among...

  7. Antioxidant pathways are up-regulated during biological nitrogen fixation to prevent ROS-induced nitrogenase inhibition in Gluconacetobacter diazotrophicus.

    Science.gov (United States)

    Alquéres, Sylvia M C; Oliveira, Jose Henrique M; Nogueira, Eduardo M; Guedes, Helma V; Oliveira, Pedro L; Câmara, Fernando; Baldani, Jose I; Martins, Orlando B

    2010-10-01

    Gluconacetobacter diazotrophicus, an endophyte isolated from sugarcane, is a strict aerobe that fixates N(2). This process is catalyzed by nitrogenase and requires copious amounts of ATP. Nitrogenase activity is extremely sensitive to inhibition by oxygen and reactive oxygen species (ROS). However, the elevated oxidative metabolic rates required to sustain biological nitrogen fixation (BNF) may favor an increased production of ROS. Here, we explored this paradox and observed that ROS levels are, in fact, decreased in nitrogen-fixing cells due to the up-regulation of transcript levels of six ROS-detoxifying genes. A cluster analyses based on common expression patterns revealed the existence of a stable cluster with 99.8% similarity made up of the genes encoding the α-subunit of nitrogenase Mo-Fe protein (nifD), superoxide dismutase (sodA) and catalase type E (katE). Finally, nitrogenase activity was inhibited in a dose-dependent manner by paraquat, a redox cycler that increases cellular ROS levels. Our data revealed that ROS can strongly inhibit nitrogenase activity, and G. diazotrophicus alters its redox metabolism during BNF by increasing antioxidant transcript levels resulting in a lower ROS generation. We suggest that careful controlled ROS production during this critical phase is an adaptive mechanism to allow nitrogen fixation.

  8. Estimation of Corn Yield and Soil Nitrogen via Soil Electrical Conductivity Measurement Treated with Organic, Chemical and Biological Fertilizers

    Directory of Open Access Journals (Sweden)

    H. Khalilzade

    2016-02-01

    Full Text Available Introduction Around the world maize is the second crop with the most cultivated areas and amount of production, so as the most important strategic crop, have a special situation in policies, decision making, resources and inputs allocation. On the other side, negative environmental consequences of intensive consumption of agrochemicals resulted to change view concerning food production. One of the most important visions is sustainable production of enough food plus attention to social, economic and environmental aspects. Many researchers stated that the first step to achieve this goal is optimization and improvement of resources use efficiencies. According to little knowledge on relation between soil electrical conductivity and yield of maize, beside the environmental concerns about nitrogen consumption and need to replace chemical nitrogen by ecological inputs, this study designed and aimed to evaluate agroecological characteristics of corn and some soil characteristics as affected by application of organic and biological fertilizers under field conditions. Materials and Methods In order to probing the possibility of grain yield and soil nitrogen estimation via measurement of soil properties, a field experiment was conducted during growing season 2010 at Research Station, Ferdowsi University of Mashhad, Iran. A randomized complete block design (RCBD with three replications was used. Treatments included: 1- manure (30 ton ha-1, 2-vermicompost (10 ton ha-1, 3- nitroxin (containing Azotobacter sp. and Azospirillum sp., inoculation was done according to Kennedy et al., 4- nitrogen as urea (400 kg ha-1 and 5- control (without fertilizer. Studied traits were soil pH, soil EC, soil respiration rate, N content of soil and maize yield. Soil respiration rate was measured using equation 1: CO2= (V0- V× N×22 Equation 1 In which V0 is the volume of consumed acid for control treatment titration, V is of the volume of consumed acid for sample treatment

  9. Estimation of biological nitrogen fixation by black locust in short-rotation forests using natural 15N abundance method

    Science.gov (United States)

    Veste, M.; Böhm, C.; Quinckenstein, A.; Freese, D.

    2012-04-01

    The importance of short rotation forests and agroforestry systems for woody biomass production for bioenergy will increase in Central Europe within the next decades. In this context, black locust (Robinia pseudoacacia) has a high growth potential especially at marginal, drought-susceptible sites such as occur in Brandenburg State (Eastern Germany). As a pioneer tree species black locust grows under a wide range of site conditions. The native range of black locust in Northern America is classified by a humid to sub-humid climate with a mean annual precipitation of 1020 to 1830 mm. In Central and Eastern Europe, this species is cultivated in a more continental climate with an annual precipitation often below 600 mm. Therefore, black locust is known to be relatively drought tolerant compared to other temperate, deciduous tree species. Because of its N2-fixation ability black locust plays generally an important role for the improvement of soil fertility. This effect is of particular interest at marginal sites in the post-mining landscapes. In order to estimate the N2-fixation potential of black locust at marginal sites leaf samples were taken from black locust trees in short rotation plantations planted between 1995 and 2007 in post-mining sites south of Cottbus (Brandenburg, NE Germany). The variation of the natural 15N abundance was measured to evaluate the biological nitrogen fixation. The nitrogen derived from the atmosphere can be calculated using a two-pool model from the quotient of the natural 15N abundances of the N2-fixing plant and the plant available soil N. Because representatively determining the plant available soil N is difficult, a non-N2-fixing reference plant growing at the same site with a similar root system and temporal N uptake pattern to the N2-fixing plant is often used. In our case we used red oak (Quercus rubra) as a reference. The average nitrogen content in the leaves of black locust ranged from 3.1% (C/N 14.8) in 15 years old trees to 3

  10. Amino Nitrogen Quantum Dots-Based Nanoprobe for Fluorescence Detection and Imaging of Cysteine in Biological Samples.

    Science.gov (United States)

    Tang, Zhijiao; Lin, Zhenhua; Li, Gongke; Hu, Yuling

    2017-03-20

    Fluorescent amino nitrogen quantum dots (aN-dots) were synthesized by microwave-assisted method using 2-azidoimidazole and aqueous ammonia. The aN-dots have a nitrogen component up to 40%, which exhibit high fluorescence quantum yield, good photostability, and excellent biocompatibility. We further explored the use of the aN-dots combined with AuNPs as a nanoprobe for detecting fluorescently and imaging of cysteine (Cys) in complex biological samples. In this sensing system, the fluorescence of aN-dots was quenched significantly by gold nanoparticles (AuNPs), while the addition of Cys can lead to the fluorescence signal recovery. Furthermore, we have demonstrated that this strategy can offer a rapid and selective detection of Cys with a good linear relationship in the range of 0.3-3.0 μmol/L. As expected, this assay was successfully applied to the detection of Cys in human serum and plasma samples with recoveries ranging from 90.0% to 106.7%. Especially, the nanoprobe exhibits good cell membrane permeability and excellent biocompatibility by CCK-8 assay, which is favorable for bioimaging applications. Therefore, this fluorescent probe ensemble was further used for imaging of Cys in living cells, which suggests our proposed method has strong potential for clinical diagnosis. As a novel member of the quantum-dot family, the aN-dots hold great promise to broaden applications in biological systems.

  11. Human platelets frozen with glycerol in liquid nitrogen: biological and clinical aspects.

    Science.gov (United States)

    Herve, P; Potron, G; Droule, C; Beduchaud, M P; Masse, M; Coffe, C; Bosset, J F; Peters, A

    1981-01-01

    Platelets were frozen using glycerol (3% in plasma) as a cryoprotective agent, a rapid cooling rate, and liquid nitrogen for storage. The cryopreserved platelets were thawed at 42 C and infused without washing. The results indicate that the quality of the thawed platelets is equivalent to platelets stored for 24 to 48 hours at room temperature. The availability of HLA phenotyped leukocyte poor platelets can reduce the frequency of sensitization to strong antigens and provide clinically effective platelets for alloimmunized patients.

  12. Photolytic transformation products and biological stability of the hydrological tracer Uranine

    Energy Technology Data Exchange (ETDEWEB)

    Gutowski, Lukasz, E-mail: gutowski@leuphana.de; Olsson, Oliver, E-mail: oliver.olsson@leuphana.de; Lange, Jens, E-mail: jens.lange@hydrology.uni-freiburg.de; Kümmerer, Klaus, E-mail: Klaus.Kuemmerer@uni.leuphana.de

    2015-11-15

    Among many fluorescence tracers, Uranine (sodium fluorescein, UR) has most widely been used in hydrological research. Extensive use of UR for tracing experiments or commercial use might cause a potential risk of long-term environmental contamination. As any organic substance released to the environment, also UR is subjected to chemical and physical reactions that can be chemical, biological and photolysis processes. These processes transform the parent compound (PC) and have not been extensively investigated for UR. This study applies two OECDs (301 D and 301 F) tests and a screening water sediment test (WST) to investigate the biodegradability of the PC. Photolysis in water was explored by Xe lamp irradiation. Subsequently, the biodegradability of the photolysis mixtures was examined. The primary elimination of UR was monitored and structures of its transformation products (TPs) were elucidated by HPLC–FLD–MS/MS. UR was found not readily biodegradable, although small degradation rates could be observed in the OECD 301 D and WST. HPLC–FLD analysis showed high primary elimination of the tracer during photolysis. However, the low degree of mineralization found indicates that the UR was not fully degraded, instead transformed to TPs. A total of 5 photo-TPs were identified. According to MS/MS data, chemical structures could be proposed for all identified photo-TPs. Likewise the parent compound it was demonstrated that photo-TPs were largely recalcitrant to microbial degradation. Although we did not find indications for toxicity, target-oriented studies on the environmental impact of these photo-TPs are warranted. Results obtained in this study show that deeper investigations are necessary to fully understand fate and risk connected to the use of UR. - Highlights: • Uranine (UR) was not biodegraded in water and water-sediment system (WST). • Only small degradation rate occurred in OECD 301 D and WST. • Photolysis leads to incomplete mineralization of UR.

  13. Lecture to inquiry: The transformation of a tech prep biology teacher

    Science.gov (United States)

    Haskell, Deborah Harris

    As teachers implement the National Science Education Standards (NRC, 1996) many have to reform the instructional methods they have used throughout their careers. This case study examines the transformation of Laurie, a 20-year teacher, during her first year of change from a "traditional" textbook/lecture style of teaching to a facilitator of an inquiry-based classroom. Implementing change requires not only pedagogical expertise, but also the belief that the modifications can be made and that the outcomes are significant. Using Bandura's social cognitive theory as a framework, changes in Laurie's self-efficacy, outcome expectancy, and motivation are followed throughout the transition. During her first year of change, Laurie used worksheets, small group activities, and guided inquiry activities, all strategies in which she had high self-efficacy and experienced positive student outcomes. She rarely used class forums, authentic assessment, and formative assessment. Factors that influenced her change were experiential professional development opportunities that allowed her to practice inquiry-based techniques, a change in her teaching environment from college prep chemistry to tech prep biology, autonomy regarding classroom decisions, and reflective decision making as she learned through experience. Using a standards-based biology textbook increased her self-efficacy toward using inquiry-based practices. The textbook format of embedding text in activities rather than adding activities to the text resulted in an increase of the number and frequency of activities done. Facilitating the textbook's Guided Inquiries and Extended Inquiries helped Laurie gain experience with inquiry-based methods. She also realized that when building from the students' concrete experiences, her students were able to attain higher-level thinking skills. The study revealed six factors contributing to Laurie's change process: (a) experiential professional development, (b) motivation for change

  14. Transformações biológicas: contribuições e perspectivas Biological transformations: contributions and perspectives

    Directory of Open Access Journals (Sweden)

    Luciana Gonzaga de Oliveira

    2009-01-01

    Full Text Available In a moment that amazingly advances are being reached on the development of technologies to obtain high value chemical compounds as polymers, fine chemicals, pharmaceutical industry intermediates and chemical entities, we cannot refuse that a meaningful progress is due to the maturing in knowledge of biological transformations. Biocatalysis and biotransformations are being widespread applied to generate processes and products with incredible success. In this review article we present the main contributions of biotechnology and biological catalytic processes to Chemistry, the most important evolution steps on enzymatic transformations, how it has being applied and which are the perspectives to academic and industrial environments. We also would like to stimulate the community to step out research in biotechnology applicable to chemical and pharmaceutical industries, trying to achieve what we believe to be the ideal layout: integrating chemical transformations, enzymatic conversions and fermentation processes.

  15. Freshwater Mussels as Biological Sensors and Cyclers of Aquatic Nitrogen Constituents: An Experimental Investigation

    Science.gov (United States)

    Kruger, A.; Just, C. L.; Mudumbai, R.; Dasgupta, S.; Newton, T. J.; Durst, J.; Boddicker, M. D.; Diken, M. B.; Bril, J.; Baidoo-Williams, H. E.

    2011-12-01

    One of the most extensive manifestations of anthropogenic mismanagement of nitrogen is eutrophication of the Gulf of Mexico. Leaching and runoff transport nitrate compounds-excess agricultural fertilizer and animal waste-via the Mississippi River to the Gulf of Mexico. Phytoplankton then multiplies exponentially, and consumes most of the dissolved oxygen. This hypoxia kills fish and other organisms, leading to so-called dead zones in the Gulf that can cover 6,000-7,000 square miles. Dead zone mitigation plans call for coupling management actions with enhanced monitoring, modeling, and research on nitrogen delivery to, as well as processing within, the Mississippi River. Our vision is to create a biosensor network of native freshwater mussels in a major river to monitor, comprehend, and ultimately model key components of the nitrogen cycle. Native freshwater mussels are a guild of long-lived, suspension feeding bivalves that perform important ecological functions in aquatic systems. Mussels can influence nutrient cycling by transferring nutrients from the water column to the riverbed. A major problem for environmental scientists is that relatively little is known about the diurnal behaviors of freshwater mussels or the impacts these behaviors may have on the aquatic nitrogen cycle. Our multidisciplinary team is performing a series of laboratory experiments exploring the feasibility of using freshwater mussels as sensors of and capacitors for nitrates. For sensing, we place Hall-effect sensors on mussels to monitor the rhythmic opening and closing of their valves (gape). One shortcoming of previous work is that mussels were monitored in artificial conditions: glued fast in laboratory flumes, or tethered in constrained settings. To overcome this shortcoming, our team has built a mussel microhabitat with a constant river water feed stock, solar simulator, and a variety of water chemistry sensor. A main thrust of our work is to develop the technology to monitor mussel

  16. [Responses of rhizosphere nitrogen and phosphorus transformations to different acid rain intensities in a hilly red soil tea plantation].

    Science.gov (United States)

    Chen, Xi; Chen, Fu-sheng; Ye, Su-qiong; Yu, Su-qin; Fang, Xiang-min; Hu, Xiao-fei

    2015-01-01

    Tea (Camellia sinensis) plantation in hilly red soil region has been long impacted by acid deposition, however its effects on nitrogen (N) and phosphorus (P) transformations in rhizosphere soils remain unclear. A 25-year old tea plantation in a typical hilly red soil region was selected for an in situ simulation experiment treated by pH 4.5, pH 3.5, pH 2.5 and control. Rhizosihere and bulk soils were collected in the third year from the simulated acid deposition experiment. Soil mineral N, available P contents and major enzyme activities were analyzed using the chemical extraction and biochemical methods, and N and P mineralization rates were estimated using the indoor aerobic incubation methods. Our results showed that compared to the control, the treatments of pH 4.5, pH 3.5 and pH 2.5, respectively decreased 7.1%, 42.1% and 49.9% NO3(-)-N, 6.4%, 35.9% and 40.3% mineral N, 10.5%, 41.1% and 46.9% available P, 18.7%, 30.1% and 44.7% ammonification rate, 3.6%, 12.7% and 38.8% net N-mineralization rate, and 31.5%, 41.8% and 63.0% P mineralization rate in rhizosphere soils; however, among the 4 treatments, rhizosphere soil nitrification rate was not significantly different, the rhizosphere soil urease and acid phosphatase activities generally increased with the increasing intensity of acid rain (Pacid intensity, the rhizosphere effects of NH4+-N, NO3(-)-N, mineral N, ammonification and net N-mineralization rates were altered from positive to negative effects, those of urease and acid phosphatease showed the opposite trends, those of available P and P mineralization were negative and that of nitrification was positive. In sum, prolonged elevated acid rain could reduce N and P transformation rates, decrease their availability, alter their rhizosphere effects, and have impact on nutrient cycling in tea plantation.

  17. Oxovanadium(IV Complexes with Nitrogen Donors: Synthesis, Characterisation, and Biological Activities

    Directory of Open Access Journals (Sweden)

    Gauri D. Bajju

    2013-01-01

    Full Text Available Some oxovanadium(IV complexes of SA/SSA and 5, 10, 15, and 20-meso-tetraphenylporphyrin (H2tpp with unidentate and bidentate nitrogen donors have been synthesized and characterized by elemental analysis, conductivity measurements, magnetic susceptibility, UV-Vis, IR, mass spectroscopy, TGA/DTA, and 1H, 13C and 51V NMR studies to investigate the steric and electronic effects of axial ligands on the properties of porphyrins. On the basis of these studies, it has been investigated that the axial ligands bind to the sixth coordination site of the vanadium ion to form a relatively stable six-coordinate-porphyrin complex where as in the case of SA/SSA complexes the nitrogen donors bind to the equatorial position giving square pyramidal geometry. The in vitro cytotoxicity against human cancer cell lines and antimicrobial activities of the synthesized compounds have been done against various fungal and bacterial pathogens. The [VO(SA/SSAL/L-L] complexes were found to possess higher antibacterial, antifungal activity and in vitro cytotoxicity against human cancer cell lines than VO(tppL complexes.

  18. Modeling nitrous oxide production during biological nitrogen removal via nitrification and denitrification: extensions to the general ASM models.

    Science.gov (United States)

    Ni, Bing-Jie; Ruscalleda, Maël; Pellicer-Nàcher, Carles; Smets, Barth F

    2011-09-15

    Nitrous oxide (N(2)O) can be formed during biological nitrogen (N) removal processes. In this work, a mathematical model is developed that describes N(2)O production and consumption during activated sludge nitrification and denitrification. The well-known ASM process models are extended to capture N(2)O dynamics during both nitrification and denitrification in biological N removal. Six additional processes and three additional reactants, all involved in known biochemical reactions, have been added. The validity and applicability of the model is demonstrated by comparing simulations with experimental data on N(2)O production from four different mixed culture nitrification and denitrification reactor study reports. Modeling results confirm that hydroxylamine oxidation by ammonium oxidizers (AOB) occurs 10 times slower when NO(2)(-) participates as final electron acceptor compared to the oxic pathway. Among the four denitrification steps, the last one (N(2)O reduction to N(2)) seems to be inhibited first when O(2) is present. Overall, N(2)O production can account for 0.1-25% of the consumed N in different nitrification and denitrification systems, which can be well simulated by the proposed model. In conclusion, we provide a modeling structure, which adequately captures N(2)O dynamics in autotrophic nitrification and heterotrophic denitrification driven biological N removal processes and which can form the basis for ongoing refinements.

  19. Influence of local and external processes on the annual nitrogen cycle and primary productivity on Georges Bank: A 3-D biological-physical modeling study

    Science.gov (United States)

    Ji, Rubao; Davis, Cabell; Chen, Changsheng; Beardsley, Robert

    2008-09-01

    Georges Bank is one of the world's most highly productive marine areas, but the mechanisms of nutrient supply to support such high productivity remain poorly understood. Intrusions of nutrient-poor Labrador Slope Water (LSW) into the Gulf of Maine (NAO-dependent) potentially can reduce nutrient delivery to the bank, but this mechanism has not been quantitatively examined. In this paper, we present the first whole-year continuous model simulation results using a biological-physical model developed for the Gulf of Maine/Georges Bank region. This high-resolution three-dimensional coupled model consists of the Finite Volume Coastal Ocean Model (FVCOM) and a Nitrogen-Phytoplankton-Zooplankton-Detritus (NPZD) model, and was used to examine the influences of local and external processes on nitrogen and phytoplankton dynamics on Georges Bank. The model captured the general pattern of spatial-temporal distributions of nitrogen and phytoplankton and provided a diagnostic analysis of different processes that control nitrogen fluxes on Georges Bank. Specifically, numerical experiments were conducted to examine seasonal variation in nitrogen transport into the central bank (new nitrogen supply) versus nitrogen regenerated internally in this region. Compared with previous observation-based studies, the model provided a quantitative estimate of nitrogen flux by integrating the transport over a longer time period and a complete spatial domain. The results suggest that, during summer months, internal nitrogen regeneration is the major nitrogen source for primary production on the central bank, while nitrogen supply through physical transport (e.g. tidal pumping) contributes about 1/5 of the total nitrogen demand, with an estimated on-bank nitrogen transport at least 50% less than previous estimates. By comparing the model runs using different nitrogen concentrations in deep Slope Water, the potential influence of NAO-dependent intrusions of LSW was examined. The results suggest

  20. Spatially robust estimates of biological nitrogen (N) fixation imply substantial human alteration of the tropical N cycle.

    Science.gov (United States)

    Sullivan, Benjamin W; Smith, W Kolby; Townsend, Alan R; Nasto, Megan K; Reed, Sasha C; Chazdon, Robin L; Cleveland, Cory C

    2014-06-03

    Biological nitrogen fixation (BNF) is the largest natural source of exogenous nitrogen (N) to unmanaged ecosystems and also the primary baseline against which anthropogenic changes to the N cycle are measured. Rates of BNF in tropical rainforest are thought to be among the highest on Earth, but they are notoriously difficult to quantify and are based on little empirical data. We adapted a sampling strategy from community ecology to generate spatial estimates of symbiotic and free-living BNF in secondary and primary forest sites that span a typical range of tropical forest legume abundance. Although total BNF was higher in secondary than primary forest, overall rates were roughly five times lower than previous estimates for the tropical forest biome. We found strong correlations between symbiotic BNF and legume abundance, but we also show that spatially free-living BNF often exceeds symbiotic inputs. Our results suggest that BNF in tropical forest has been overestimated, and our data are consistent with a recent top-down estimate of global BNF that implied but did not measure low tropical BNF rates. Finally, comparing tropical BNF within the historical area of tropical rainforest with current anthropogenic N inputs indicates that humans have already at least doubled reactive N inputs to the tropical forest biome, a far greater change than previously thought. Because N inputs are increasing faster in the tropics than anywhere on Earth, both the proportion and the effects of human N enrichment are likely to grow in the future.

  1. Spatially robust estimates of biological nitrogen (N) fixation imply substantial human alteration of the tropical N cycle

    Science.gov (United States)

    Sullivan, Benjamin W.; Smith, William K.; Townsend, Alan R.; Nasto, Megan K.; Reed, Sasha C.; Chazdon, Robin L.; Cleveland, Cory C.

    2014-01-01

    Biological nitrogen fixation (BNF) is the largest natural source of exogenous nitrogen (N) to unmanaged ecosystems and also the primary baseline against which anthropogenic changes to the N cycle are measured. Rates of BNF in tropical rainforest are thought to be among the highest on Earth, but they are notoriously difficult to quantify and are based on little empirical data. We adapted a sampling strategy from community ecology to generate spatial estimates of symbiotic and free-living BNF in secondary and primary forest sites that span a typical range of tropical forest legume abundance. Although total BNF was higher in secondary than primary forest, overall rates were roughly five times lower than previous estimates for the tropical forest biome. We found strong correlations between symbiotic BNF and legume abundance, but we also show that spatially free-living BNF often exceeds symbiotic inputs. Our results suggest that BNF in tropical forest has been overestimated, and our data are consistent with a recent top-down estimate of global BNF that implied but did not measure low tropical BNF rates. Finally, comparing tropical BNF within the historical area of tropical rainforest with current anthropogenic N inputs indicates that humans have already at least doubled reactive N inputs to the tropical forest biome, a far greater change than previously thought. Because N inputs are increasing faster in the tropics than anywhere on Earth, both the proportion and the effects of human N enrichment are likely to grow in the future.

  2. Ozone-biological activated carbon integrated treatment for removal of precursors of halogenated nitrogenous disinfection by-products.

    Science.gov (United States)

    Chu, Wenhai; Gao, Naiyun; Yin, Daqiang; Deng, Yang; Templeton, Michael R

    2012-03-01

    Pilot-scale tests were performed to reduce the formation of several nitrogenous and carbonaceous disinfection by-products (DBPs) with an integrated ozone and biological activated carbon (O(3)-BAC) treatment process following conventional water treatment processes (coagulation-sedimentation-filtration). Relative to the conventional processes alone, O(3)-BAC significantly improved the removal of turbidity, dissolved organic carbon, UV(254), NH(4)(+) and dissolved organic nitrogen from 98-99%, 58-72%, 31-53%, 16-93% and 35-74%, respectively, and enhanced the removal efficiency of the precursors for the measured DBPs. The conventional process was almost ineffective in removing the precursors of trichloronitromethane (TCNM) and dichloroacetamide (DCAcAm). Ozonation could not substantially reduce the formation of DCAcAm, and actually increased the formation potential of TCNM; it chemically altered the molecular structures of the precursors and increased the biodegradability of N-containing organic compounds. Consequently, the subsequent BAC filtration substantially reduced the formation of the both TCNM and DCAcAm, thus highlighting a synergistic effect of O(3) and BAC. Additionally, O(3)-BAC was effective at controlling the formation of the total organic halogen, which can be considered as an indicator of the formation of unidentified DBPs.

  3. Nitrification-denitrification biological treatment of a high-nitrogen waste stream for water-reuse applications.

    Science.gov (United States)

    Jackson, W Andrew; Morse, Audra; McLamore, Eric; Wiesner, Ted; Xia, Shu

    2009-04-01

    This research was conducted to evaluate the use of biological nitrification-denitrification systems as pre-processors for recycling wastewater to potable water in support of space exploration. A packed-bed bioreactor and membrane-aerated nitrification reactor were operated in series with a 10:1 recycle ratio over varying loading rates. The dissolved organic carbon (DOC) removal exceeded 80% for all loading rates (theta = 1 to 6.8 days), while total nitrogen removal generally increased with decreasing retention time, with a maximum removal of 55%. The degree of nitrification generally declined with decreasing retention time from a high of 80% to a low of 60%. Maximum DOC and total nitrogen volumetric removal rates exceeded 1000 and 800 g/m3 x d, respectively, and maximum nitrification volumetric conversion rates exceeded 300 g/m3 x d. At low hydraulic loading rates, the system was stoichiometrically limited, while kinetic limitations dominated at high hydraulic loading rates. Incomplete nitrification occurred at high loading rates, likely as a result of the high pH and large concentrations of ammonia.

  4. Isolation and Identification of Phosphate Solubilizing and Nitrogen Fixing Bacteria from Soil in Wamena Biological Garden, Jayawijaya, Papua

    Directory of Open Access Journals (Sweden)

    SRI WIDAWATI

    2005-07-01

    Full Text Available A study was undertaken to investigate the occurrence of phosphate solubilizing bacteria (PSB and nitrogen-fixing bacteria (NFB from soil samples of Wamena Biological Garden (WbiG. Eleven soil samples were collected randomly to estimate microbial population which used plate count method. The result showed that the microbial population ranged from 5.0x103-7.5x106 cells of bacteria/gram of soil and 5.0x103-1.5x107 cells of bacteria/gram of soil for PSB and NFB respectively. There were 17 isolates which have been identified till genus and species. The isolated microorganism were identified as PSB i.e. Bacillus sp., B. pantothenticus, B. megatherium, Flavobacterium sp., F. breve, Klebsiella sp., K. aerogenes, Chromobacterium lividum, Enterobacter alvei, E. agglomerans, Pseudomonas sp., Proteus sp. and as NFB i.e. Azotobacter sp., A. chroococcum, A. paspalii, Rhizobium sp., and Azospirillum sp.

  5. Population dynamics in wastewater treatment plants with enhanced biological phosphorus removal operated with and without nitrogen removal

    DEFF Research Database (Denmark)

    Lee, N.; Jansen, J.l.C.; Aspegren, H.

    2002-01-01

    The population dynamics of activated sludge in a pilot plant with two activated sludge systems, both designed for enhanced biological phosphorus removal (EBPR), but one of them with (BNP) and the other without (BP) nitrogen removal, was monitored during a period of 2.5 years. The influent water...... to the pilot plant was periodically manipulated by external addition of phosphorus (P), acetate and glucose, respectively. The population dynamics and the in situ physiology were monitored by quantitative fluorescence in situ hybridization (FISH) and microautoradiography. Significant P removal was observed...... in both systems throughout the whole period, with significant increases of the P removal when substrates were dosed. The activated sludge in both systems contained large amounts of dense clusters of gram-negative, methylene-blue staining coccoid rods during the whole period. A large part of the clusters...

  6. Respirometry applied for biological nitrogen removal process; Aplicacion de la respirometria al tratamiento biologico para la eliminacion del nitrogeno

    Energy Technology Data Exchange (ETDEWEB)

    Serrano, E.

    2004-07-01

    In waste water treatment plants, the Biological Nitrogen Removal (BNR) has acquired a fundamental importance. The BNR processes are Nitrification ( aerobic) and Denitrification (anoxic). Since both processes are carried on living microorganisms, a lack of their bioactivity information might cause serious confusion about their control criteria and following up purposes. For this reason, the Re spirometry applied to those processes has reached an important role by getting an essential information in a timely manner through respiration rate measurements in static and dynamic modes and applications such as AUR (Ammonium Uptake Rate), Nitrification Capacity. RBCOD (Readily Biodegradable COD) as well as AUR related to SRT (Sludge age), RBCOD related to NUR (Specific Nitrate Uptake Rate) and others. By other side in this article we have introduced a not very well known applications related to denitrification, about the methanol acclimatization and generated bioactivity. (Author) 6 refs.

  7. Conceptualization and validation of a dynamic model for the simulation of nitrogen transformations and fluxes in fish ponds

    NARCIS (Netherlands)

    Jimenez-Montealegre, R.; Verdegem, M.C.J.; Dam, van A.A.; Verreth, J.A.J.

    2002-01-01

    Nitrogen is a key element in aquatic environments and an important pond management variable. In aquaculture systems, nitrogen accumulation eventually leads to a deterioration of the system. The interactions between various N-species are complex and difficult to integrate. Modelling can improve our a

  8. The emerging role of reactive oxygen and nitrogen species in redox biology and some implications for plasma applications to medicine and biology

    Science.gov (United States)

    Graves, David B.

    2012-07-01

    Reactive oxygen species (ROS) and the closely related reactive nitrogen species (RNS) are often generated in applications of atmospheric pressure plasmas intended for biomedical purposes. These species are also central players in what is sometimes referred to as ‘redox’ or oxidation-reduction biology. Oxidation-reduction biochemistry is fundamental to all of aerobic biology. ROS and RNS are perhaps best known as disease-associated agents, implicated in diabetes, cancer, heart and lung disease, autoimmune disease and a host of other maladies including ageing and various infectious diseases. These species are also known to play active roles in the immune systems of both animals and plants and are key signalling molecules, among many other important roles. Indeed, the latest research has shown that ROS/RNS play a much more complex and nuanced role in health and ageing than previously thought. Some of the most potentially profound therapeutic roles played by ROS and RNS in various medical interventions have emerged only in the last several years. Recent research suggests that ROS/RNS are significant and perhaps even central actors in the actions of antimicrobial and anti-parasite drugs, cancer therapies, wound healing therapies and therapies involving the cardiovascular system. Understanding the ways ROS/RNS act in established therapies may help guide future efforts in exploiting novel plasma medical therapies. The importance of ROS and RNS to plant biology has been relatively little appreciated in the plasma biomedicine community, but these species are just as important in plants. It appears that there are opportunities for useful applications of plasmas in this area as well.

  9. Biological Effects of Short, High-Level Exposure to Gases: Nitrogen Oxides.

    Science.gov (United States)

    1980-07-01

    SUPPLEMENTARY NOT ES3 This project was one of four under the same contract; the others covered ammonia , carbon monoxide, and sulfur dioxide. 3 IS. KEY wOROS...characterize the biological responses to short, high-level exposures to four gases associated with certain Army weapons systems ( ammonia , carbon monoxide...20- i --- 7 (2) Biochemical and Other Effects Buckley and BalchumlO found biochemical changes, principally in enzyme activity of the liver, spleen

  10. Nitrogen Substituted Polycyclic Aromatic Hydrocarbon As Capable Interstellar Infrared Spectrum Source Considering Astronomical Chemical Evolution Step To Biological Organic Purine And Adenine

    CERN Document Server

    Ota, Norio

    2016-01-01

    In order to find out capable chemical evolution step from astronomically created organic in interstellar space to biological organic on the earth, infrared spectrum of nitrogen substituted carbon pentagon-hexagon coupled polycyclic aromatic hydrocarbon was analyzed by the density functional theory. Ionization was modeled from neutral to tri-cation. Among one nitrogen and two nitrogen substituted NPAH, we could find good examples showing similar IR behavior with astronomically well observed one as like C8H6N1, C7H5N2, and C7H5N2. We can imagine that such ionized NPAH may be created in interstellar space by attacks of high energy nitrogen and photon. Whereas, in case of three and four nitrogen substituted cases as like C6H4N3 and C5H3N4, there were no candidate showing similar behavior with observed one. Also, IR of typical biological organic with four and five nitrogen substituted one as like purine and adenine resulted no good similarity with observed one. By such theoretical comparison, one capable story of ...

  11. Simultaneous identification and qualitative determination of hydrocyanic acid and phosphine by gas chromatography with nitrogen-phosphorus detector and Headspace autosampler (hs-gc-npd) in biological fluids

    OpenAIRE

    Monsalve-Salamanca, Luz Adriana; Ortiz-Rangel, María Martha; Mateus-Fontecha, Alexis

    2015-01-01

    Introduction: This article described a simple, rapid, sensitive methodology for the identification and qualitative determination of phosphine and hydrocyanic cyanide in biological (i.e., blood and stomach contents) and non-biological samples by gas chromatography (gc). Methodology: The foregoing was carried out by a selective nitrogen-phosphorus detector (npd) and Headspace (hs) volatile autosampler using acetonitrile (acn) as internal standard (istd). The procedure involves taking and pourin...

  12. Microgravity Effects on the Early Events of Biological Nitrogen Fixation in Medicago Truncatula: Results from the SyNRGE Experiment

    Science.gov (United States)

    Stutte, Gary W.; Roberts, Michael S.

    2013-02-01

    SyNRGE (Symbiotic Nodulation in a Reduced Gravity Environment) was a sortie mission on STS-135 in the Biological Research in Canisters (BRIC) hardware to study the effect of μg on a plant-microbe symbiosis resulting in biological nitrogen fixation. Medicago truncatula, a model species for the legume family, was inoculated with its bacterial symbiont, Sinorhizobium meliloti, to observe early biomolecular events associated with infection and nodulation in Petri Dish Fixation Units (PDFU’s). Two sets of experiments were conducted in orbit and in 24-hour delayed ground controls. Experiments were designed to determine if S. meliloti would infect M. truncatula and initiate biomolecular changes associated with nodule formation and if the μg environment altered the host plant and/or bacteria to induce nodule formation upon return to 1g. Initial analysis results demonstrate that the legumes and bacteria cultivated in μg have potential to develop a symbiotic interaction, but suggest that μg alters their ability to form nodules upon return to 1g. (Research supported by NASA ESMD/ Advance Capabilities Division grant NNX10AR09A)

  13. Thermal expansion and phase transformations of nitrogen-expanded austenite studied with in situ synchrotron X-ray diffraction

    DEFF Research Database (Denmark)

    Brink, Bastian; Ståhl, Kenny; Christiansen, Thomas Lundin;

    2014-01-01

    Nitrogen-expanded austenite, _N, with high and low nitrogen contents was produced from AISI 316 grade stainless steel powder by gaseous nitriding in ammonia/hydrogen gas mixtures. In situ synchrotron X-ray diffraction was applied to investigate the thermal expansion and thermal stability...... as a fitting parameter. The stacking fault density is constant for temperatures up to 680 K, whereafter it decreases to nil. Surprisingly, a transition phase with composition M4N (M = Fe, Cr, Ni, Mo) appears for temperatures above 770 K. The linear coefficient of thermal expansion depends on the nitrogen...

  14. Calpain Activity Is Generally Elevated during Transformation but Has Oncogene-Specific Biological Functions

    Directory of Open Access Journals (Sweden)

    N.O. Carragher

    2004-01-01

    Full Text Available Several oncogene and tumor-suppressor gene products are known substrates for the calpain family of cysteine proteases, and calpain is required for transformation by v-src and tumor invasion. Thus, we have now addressed whether calpain is generally associated with transformation and how calpain contributes to oncogene function. Our results demonstrate that calpain activity is enhanced upon transformation induced by the v-Src, v-Jun, v-Myc, k-Ras, and v-Fos oncoproteins. Furthermore, elevated calpain activity commonly promotes focal adhesion remodelling, disruption of actin cytoskeleton, morphological transformation, and cell migration, although proteolysis of target substrates (such as focal adhesion kinase, talin, and spectrin is differently specified by individual oncoproteins. Interestingly, v-Fos differs from other common oncoproteins in not requiring calpain activity for actin/adhesion remodelling or migration of v-Fos transformed cells. However, anchorage-independent growth of all transformed cells is sensitive to calpain inhibition. In addition, elevated calpain activity contributes to oncogene-induced apoptosis associated with transformation by v-Myc. Taken together, these studies demonstrate that calpain activity is necessary for full cellular transformation induced by common oncoproteins, but has distinct roles in oncogenic events induced by individual transforming proteins. Thus, targeting calpain activity may represent a useful general strategy for interfering with activated protooncogenes in cancer cells.

  15. Effect of nitrogen fertilization on growth of Arundo donax and on rearing of a biological control agent, the shoot gall-forming wasp Tetramesa romana

    Science.gov (United States)

    Nitrogen augmentation often leads to increased feeding and/or reproduction by herbivorous insects, but little is known about the effects on insects that gall grasses. The shoot tip-galling wasp Tetramesa romana has been released for biological control of the giant grass arundo (Arundo donax) in the...

  16. Influence of the DMPP (3,4-dimethyl pyrazole phosphate) on nitrogen transformation and leaching in multi-layer soil columns.

    Science.gov (United States)

    Yu, Qiao-Gang; Chen, Ying-Xu; Ye, Xue-Zhu; Tian, Guang-Ming; Zhang, Zhi-Jian

    2007-10-01

    The application of nitrogen fertilizers leads to various ecological problems such as nitrate leaching. The use of nitrification inhibitors as nitrate leaching retardants is a proposal that has been suggested for inclusion in regulations in many countries. In this study, using a multi-layer soil column device, the influence of new nitrification inhibitor DMPP (3,4-dimethyl pyrazole phosphate) was studied for understanding the nitrogen vertical transformation and lowering the nitrate leaching at different soil profile depths. The results indicated that, within 60 d of experiment, the regular urea added 1.0% DMPP can effectively inhibit the ammonium oxidation in the soil, and improve the ammonium concentration in soil solution over the 20cm depths of soil profile, while decline the concentrations of nitrate and nitrite. No obvious difference was found on ammonium concentrations in soil solution collected from deep profile under 20cm depths between regular urea and the urea added 1.0% DMPP. There was also no significant difference for the nitrate, ammonium and nitrite concentrations in the soil solution under 40cm depths of soil profile with the increasing nitrogen application level, among the treatments of urea added 1.0% DMPP within 60 d. It is proposed that DMPP could be used as an effective nitrification inhibitor in some region to control ammonium oxidation and decline the ion-nitrogen leaching, minimizing the shallow groundwater pollution risk and being beneficial for the ecological environment.

  17. STRUCTURE AND SOME BIOLOGICAL PROPERTIES OF Fe(III COMPLEXES WITH NITROGEN-CONTAINING LIGANDS

    Directory of Open Access Journals (Sweden)

    Ion Bulhac

    2016-06-01

    Full Text Available Four coordination compounds of iron(III with ligands based on hydrazine and sulfadiazine: FeCl3·digsemi·2H2O (I (digsemi-semicarbazide diacetic acid dihydrazide, [Fe(HLSO4] (II (НL - sulfadiazine, [Fe(H2L1(H2O2](NO33·5H2O (III (H2L1-2,6-diacetylpyridine bis(nicotinoylhydrazone and [Fe(H2L2(H2O2](NO33•1.5H2O (IV (H2L2 - 2,6-diacetylpyridine bis(isonicotinoylhydrazone were synthesized. The spectroscopic and structural characterisation as well as their biological, properties are presented.

  18. Visualizing Single Cell Biology: Nanosims Studies of Carbon and Nitrogen Metabolism in Diazotrophic Cyanobacteria

    Science.gov (United States)

    Pett-Ridge, J.; Finzi, J. A.; Capone, D. G.; Popa, R.; Nealson, K. H.; Ng, W.; Spormann, A. M.; Hutcheon, I. D.; Weber, P. K.

    2007-12-01

    Filamentous nitrogen fixing (diazotrophic) cyanobacteria are key players in global nutrient cycling, but the relationship between CO2- and N2-fixation and intercellular exchange of these elements remains poorly understood in many genera. These bacteria are faced with the challenge of isolating regions of N-fixation (O2 inhibited) and photosynthetic (O2 producing) activity. We used isotope labeling in conjunction with a high-resolution isotope and elemental mapping technique (NanoSIMS) to quantitatively describe 13C and 15N uptake and transport in two aquatic cyanobacteria grown on NaH13CO3 and 15N2. The technical challenges of tracing isotopes within individual bacteria can be overcome with high resolution Secondary Ion Mass Spectrometry (NanoSIMS). In NanoSIMS analysis, samples are sputtered with an energetic primary beam (Cs+, O-) liberating secondary ions that are separated by the mass spectrometer and detected in a suite of electron multipliers. Five isotopic species may be analyzed concurrently with spatial resolution as fine as 50nm. A high sensitivity isotope ratio 'map' can then be generated for the analyzed area. Using sequentially harvested cyanobacteria in conjunction with enriched H13CO3 and 15N2 incubations, we measured temporal enrichment patterns that evolve over the course of a day's growth and suggest tightly regulated changes in fixation kinetics. With a combination of TEM, SEM and NanoSIMS analyses, we also mapped the distribution of C, N and Mo (a critical nitrogenase co-factor) isotopes in intact cells. Our results suggest that NanoSIMS mapping of metal enzyme co-factors may be a powerful method of identifying physiological and morphological characteristics within individual bacterial cells, and could be used to provide a 3-dimensional context for more traditional analyses such as immunogold labeling. Finally, we resolved patterns of isotope enrichment at multiple spatial scales: sub-cellular variation, cell-cell differences along filaments

  19. A Comparative Nitrogen Balance and Productivity Analysis of Legume and Non-legume Supported Cropping Systems: The Potential Role of Biological Nitrogen Fixation

    Science.gov (United States)

    Iannetta, Pietro P. M.; Young, Mark; Bachinger, Johann; Bergkvist, Göran; Doltra, Jordi; Lopez-Bellido, Rafael J.; Monti, Michele; Pappa, Valentini A.; Reckling, Moritz; Topp, Cairistiona F. E.; Walker, Robin L.; Rees, Robert M.; Watson, Christine A.; James, Euan K.; Squire, Geoffrey R.; Begg, Graham S.

    2016-01-01

    The potential of biological nitrogen fixation (BNF) to provide sufficient N for production has encouraged re-appraisal of cropping systems that deploy legumes. It has been argued that legume-derived N can maintain productivity as an alternative to the application of mineral fertilizer, although few studies have systematically evaluated the effect of optimizing the balance between legumes and non N-fixing crops to optimize production. In addition, the shortage, or even absence in some regions, of measurements of BNF in crops and forages severely limits the ability to design and evaluate new legume–based agroecosystems. To provide an indication of the magnitude of BNF in European agriculture, a soil-surface N-balance approach was applied to historical data from 8 experimental cropping systems that compared legume and non-legume crop types (e.g., grains, forages and intercrops) across pedoclimatic regions of Europe. Mean BNF for different legume types ranged from 32 to 115 kg ha−1 annually. Output in terms of total biomass (grain, forage, etc.) was 30% greater in non-legumes, which used N to produce dry matter more efficiently than legumes, whereas output of N was greater from legumes. When examined over the crop sequence, the contribution of BNF to the N-balance increased to reach a maximum when the legume fraction was around 0.5 (legume crops were present in half the years). BNF was lower when the legume fraction increased to 0.6–0.8, not because of any feature of the legume, but because the cropping systems in this range were dominated by mixtures of legume and non-legume forages to which inorganic N as fertilizer was normally applied. Forage (e.g., grass and clover), as opposed to grain crops in this range maintained high outputs of biomass and N. In conclusion, BNF through grain and forage legumes has the potential to generate major benefit in terms of reducing or dispensing with the need for mineral N without loss of total output. PMID:27917178

  20. Biological and Physicochemical Parameters Related to the Nitrogen Cycle in the Rhizospheric Soil of Native Potato (Solanum phureja Crops of Colombia

    Directory of Open Access Journals (Sweden)

    Nathalia Flórez-Zapata

    2011-01-01

    Full Text Available Nitrogen (N plays an important role in agricultural production. This study was designed to evaluate the presence of cultivable N cycle-associated microorganisms (nitrogen-fixing bacteria—NFB, proteolytic bacteria—PR, ammonifiers—AMO, ammonium-oxidizing bacteria—AOB, nitrite-oxidizing bacteria—NOB, and denitrifiers—DEN, and their relationship with physical-chemical and agronomic soil descriptors, in Solanum phureja rhizospheric soil samples, from traditional and organic crop management farms. A cluster analysis with the physical and chemical properties of soil, allowed to identify the organic matter content as an important factor that determines the outcome of that grouping. Significant differences (<0.05 between farms were found in the abundance of this groups, but correlation analysis showed that proteolytic and nitrogen fixing bacteria were the main nitrogen associated functional groups affected by soils' physical-chemical characteristics. The amount of ammonia available is affected by the agricultural management strategy, which consequently affects the NFB abundance. Finally the results showed that PR, protease activity and soil properties related with organic matter transformation has a positive relationship with productivity, which given the high organic matter content of the Andean soils being studied, we conclude that nitrogen mineralization process has an important role in the nitrogen cycle and its bioavailability in this ecosystem.

  1. Diazotrophy in the Deep: An analysis of the distribution, magnitude, geochemical controls, and biological mediators of deep-sea benthic nitrogen fixation

    Science.gov (United States)

    Dekas, Anne Elizabeth

    Biological nitrogen fixation (the conversion of N2 to NH3) is a critical process in the oceans, counteracting the production of N2 gas by dissimilatory bacterial metabolisms and providing a source of bioavailable nitrogen to many nitrogen-limited ecosystems. One currently poorly studied and potentially underappreciated habitat for diazotrophic organisms is the sediments of the deep-sea. Although nitrogen fixation was once thought to be negligible in non-photosynthetically driven benthic ecosystems, the present study demonstrates the occurrence and expression of a diversity of nifH genes (those necessary for nitrogen fixation), as well as a widespread ability to fix nitrogen at high rates in these locations. The following research explores the distribution, magnitude, geochemical controls, and biological mediators of nitrogen fixation at several deep-sea sediment habitats, including active methane seeps (Mound 12, Costa Rica; Eel River Basin, CA, USA; Hydrate Ridge, OR, USA; and Monterey Canyon, CA, USA), whale-fall sites (Monterey Canyon, CA), and background deep-sea sediment (off-site Mound 12 Costa Rica, off-site Hydrate Ridge, OR, USA; and Monterey Canyon, CA, USA). The first of the five chapters describes the FISH-NanoSIMS method, which we optimized for the analysis of closely associated microbial symbionts in marine sediments. The second describes an investigation of methane seep sediment from the Eel River Basin, where we recovered nifH sequences from extracted DNA, and used FISH-NanoSIMS to identify methanotrophic archaea (ANME-2) as diazotrophs, when associated with functional sulfate-reducing bacterial symbionts. The third and fourth chapters focus on the distribution and diversity of active diazotrophs (respectively) in methane seep sediment from Mound 12, Costa Rica, using a combination of 15N-labeling experiments, FISH-NanoSIMS, and RNA and DNA analysis. The fifth chapter expands the scope of the investigation by targeting diverse samples from methane

  2. Degradation of phenolics, nitrogen-heterocyclics and polynuclear aromatic hydrocarbons in a rotating biological contactor.

    Science.gov (United States)

    Jeswani, Hansa; Mukherji, Suparna

    2012-05-01

    The degradation of phenolics, heterocyclics and polynuclear aromatic hydrocarbons (PAHs) in a synthetic biomass gasifier wastewater with average COD of 1388 mg/L was studied in a three stage rotating biological contactor (RBC) using the pyrene degrader, Exiguobacterium aurantiacum and activated sludge consortia (1:3 v/v). As the organic loading rate (OLR) was varied from 3.3 to 14 g/m(2)/d, the COD removal ranged from 63.3% to 92.6%. Complete removal of all the constituents was observed at the lowest OLR of 3.3g/m(2)/d. At 24h hydraulic retention time (HRT) and OLR of 6.6g/m(2)/d complete removal of pyridine, quinoline and benzene and 85-96% removal of phenol, naphthalene, phenanthrene, fluoranthene and pyrene was observed. E. aurantiacum was found to be the dominant bacteria in the biofilm. Clark's model provided good fits to data for all the three stages of the RBC.

  3. [Soil biological activities at maize seedling stage under application of slow/controlled release nitrogen fertilizers].

    Science.gov (United States)

    Li, Dongpo; Wu, Zhijie; Chen, Lijun; Liang, Chenghua; Zhang, Lili; Wang, Weicheng; Yang, Defu

    2006-06-01

    With pot experiment and simulating field ecological environment, this paper studied the effects of different slow/ controlled release N fertilizers on the soil nitrate - reductase and urease activities and microbial biomass C and N at maize seedling stage. The results showed that granular urea amended with dicyandiamide (DCD) and N-(n-bultyl) thiophosphoric triamide (NBPT) induced the highest soil nitrate-reductase activity, granular urea brought about the highest soil urease activity and microbial biomass C and N, while starch acetate (SA)-coated granular urea, SA-coated granular urea amended with DCD, methyl methacrylate (MMA) -coated granular urea amended with DCD, and no N fertilization gave a higher soil urease activity. Soil microbial C and N had a similar variation trend after applying various kinds of test slow/controlled release N fertilizers, and were the lowest after applying SA-coated granular urea amended with DCD and NBPT. Coated granular urea amended with inhibitors had a stronger effect on soil biological activities than coated granular urea, and MMA-coating had a better effect than SA-coating.

  4. TECHNIQUES FOR MAKING BIOLOGICS AND MINERAL NITROGEN AND THEIR INFLUENCE ON THE YIELD OF THE MIXED CROPS IN THE CONDITIONS OF GREY FOREST SOILS

    Directory of Open Access Journals (Sweden)

    Shkotova O. N.

    2016-04-01

    Full Text Available In the conditions of grey forest soils in the Bryansk region among the fodder crops widespread mixed legume-cereal crops. The results showed that the photosynthetic activity of cereals and leguminous crops and their yields in mixed crops depended on made of biological and mineral nitrogen fertilizers. It is established that the nitrogen in the form of ammonium nitrate has a positive impact on the formation of assimilating leaf surface, photosynthetic potential and net productivity and yield of grain mixture in lupine-barley and soybean -barley cropping and pea-barley crops the use of nitrogen in the form of potassium nitrate was more favorable. It was found that in lupine-barley crops the active symbiotic potential has increased by 25,5% and the yield increased by 21,3% , in soybean-barley crops 28,5% and 19,2% respectively, due to the joint use of a mixture of symbiotic and associative rhizobacteria and mineral nitrogen in the form of ammonium nitrate in the dose of N60. In pea-barley agrocenosis it has improved the efficiency of cultivation of joint application of mixed inoculant symbiotic and associative rhizobacteria on the background of the application of mineral nitrogen in the form of potassium nitrate in the dose of N60, where there was an increase of the active symbiotic potential by 34,7% and grain yield by 24,7% compared to the option when adding the mixture of biological products

  5. An ultra-micro method for the determination of total nitrogen in biological fluids based on Kjeldahl digestion and enzymatic estimation of ammonia.

    Science.gov (United States)

    Smit, E M

    1979-06-01

    An ultra-micro method for the determination of the total nitrogen-content of biological fluids and suspensions is described, based on a digestion in sulphuric acid and a enzymatic determination of the ammonia formed with glutamate dehydrogenase (EC 1.4.1.3). The proposed method yields the same results as the classical Kjeldahl procedure, but is less time-consuming. The detection-limit of the nitrogen, without loss of precision and accuracy, is much lower than in the original Kjeldahl procedure, and is in the order of 35 ng N per sample.

  6. Soil ni.trogen transformations varied with plant community under Nanchang urban forests in mid-subtropical zone of China

    Institute of Scientific and Technical Information of China (English)

    REN Wen; CHEN Fu-sheng; HU Xiao-fei; YU Ming-quan; FENG Xue

    2011-01-01

    Soil N transformations using the polyvinyl chloride (PVC)closed-top tube in situ incubation method were studied in Nanchang urban forests of the mid-subtropical region of China m different monthsof 2007.Four plots of 20 m × 20 m were established in four different plant communities that represented typical successional stages of forest development including shrubs,coniferous forest,mixed forest and broadleaved forest.Average concentrations of soil NH4+-N fiom January to December were not different among the four plant communities.The concentrations of soil NO3-N and mineral N,and the annual rates of ammonification,nitrification and net N-mineralization under the early successional shrub community and coniferous forest were generally lower than that of the late successional mixed and broad-leaved forests (p<0.05).Similar differences among the plant communities were also shown in the relative nitrification index (NH4+-N/NO3-N) and relative nitrification intensity (nitrification rate/net N-mineralization rate).The annual net N-mineralization rate was increased from younger to older plant communities,from 15.1 and 41.4 kg·ha-1·a-1 under the shrubs and coniferous forest communities to 98.0 and 112.9 kg·ha-1·a-1 under the mixed and broad-leaved forests,respectively.Moreover,the high annual nitrification rates (50-70 kg·ha-1·a-1) and its end product,NO3-N (2.4-3.8mg·kg-1),under older plant communities could increase the potential risk of N loss.Additionally,the temporal patterns of the different soil N variables mentioned above varied with different plant community due to the combined affects of natural biological processes associated with forest maturation and urbanization.Our results indicated that urban forests arc moving towards a state of"N saturation" (extremely nitrification rate and NO3-N content) as they mature.

  7. Effects of inorganic fertilizers on biological nitrogen fixation and seedling growth of some agroforestry trees in Bangladesh

    Institute of Scientific and Technical Information of China (English)

    Mohammad Belal Uddin; Mohammed Abu Sayed Arfin Khan; Sharif Ahmed Mukul; Mohammed Kamal Hossain

    2008-01-01

    The effects of different inorganic fertilizers (Urea and Triple Super Phosphate (TSP)) on seedling growth and nodulation capabilities of four agroforestry tree species (Albizia chinensis,A.saman,Acacia nilotica and Sesbania sesban) were compared.The nodulation of these seedlings were treated with different fertilizer treatments (at the rate of urea 40 kg(hm-2,urea 80 kg(hm-2,TSP 40 kg(hm-2,TSP 80 kg(hm-2,(urea+TSP) 40 kg(hm-2-and (urea+TSP) 80 kg(hm-2) after one month of seed germination.The results revealed that the seedling growth was enhanced significantly with moderate fertilizer treatment.In some cases,the higher levels of fertilizers reduced the seedling growth.The study also revealed that the nodulation in nodule number and size was significantly inhibited by the application of N fertilizer (Urea),while it was increased significantly with the application of P fertilizer (TSP).This study improved our understanding and provided insights that would be useful to the farmers in their efforts to amend the soil with inorganic fertilizers in order to enhance plant growth and biological nitrogen fixation.

  8. Biological Nitrogen Fixation in Sugarcane and Nitrogen Transfer from Sugarcane to Cassava in the Intercropping System%甘蔗/木薯间作系统中氮素的固定与转移

    Institute of Scientific and Technical Information of China (English)

    周晓舟; 李杨瑞; 杨丽涛

    2012-01-01

    为探讨甘蔗/木薯间作系统中甘蔗的固氮量变化及氮素向术薯的转移情况.利用15N同位素稀释法进行田间示踪试验.结果表明:单作下甘蔗的固氮百分率为29.50%,固氮量为11.31gm2.间作下甘蔗的总固氮百分率为36.43%,它包括供甘蔗自身生长需要的固氮百分率29.90%和转移到木薯的固氮百分率6.53%;间作下甘蔗的固氮量为17.82g/m2,其中82.07%用于自身生长需要,17.93%转移给木薯利用.间作木薯的总氮量中21.42%来自甘蔗固氮.此结果表明在单作和间作下甘蔗固氮对自身贡献的大小基本一致.甘蔗/木薯间作对甘蔗固氮有促进作用,但促进部分转移给木薯利用.%The biological nitrogen fixation in sugarcane and the fixed nitrogen transfer from sugarcane to cassava in an intercropping system were investigated. 15N isotope dilution technique was used in this experiment The experimental results showed that the nitrogen fixation rate and the nitrogen fixation amout was 29.50%, 11.31 g/m2 respectively under sole sugarcane planting. In the sugarcane-cassava intercropping system, the nitrogen fixation rate was 36.43%, including 29.90% in sugarcane for its growth utilization and 6.53% in cassava transferred from sugarcane; and the nitrogen fixation amount was 17.82 g/m2, in which 82.07% for sugarcane growth and 17.93% for utilization in cassava. It is concluded that sugarcane plants received the same amount of nitrogen from biological fixation in both sole planting and intercropping systems, but it could fix more nitrogen and transfer to cassava in the sugarcane-cassava intercropping system.

  9. Effects of nitrogen fertilization in cotton crop on Aphis gossypii Glover (Hemiptera: Aphididae) biology; Efeitos da adubacao nitrogenada em algodoeiro sobre a biologia de Aphis gossypii Glover (Hemiptera: Aphididae)

    Energy Technology Data Exchange (ETDEWEB)

    Barros, Ricardo; Degrande, Paulo E.; Fernandes, Marcos G.; Nogueira, Rodrigo F. [Universidade Federal da Grande Dourados, MS (Brazil). Faculdade de Ciencias Agrarias]. E-mail: rbarrosufms@yahoo.com.br, degrande@ufgd.edu.br

    2007-09-15

    The cotton aphid, Aphis gossypii Glove, is one of the pests of cotton crop and its relation with the host seem to depend on the amount of nitrogen available to the plant. The biology of A. gossypii using different cotton nitrogen fertility regimes was studied under greenhouse conditions, in Dourados, MS. A completely randomized design with nine replications in a factorial scheme (2x4x2)+1 was used. Two nitrogen sources (sulphate of ammonium and urea), four doses of nitrogen (50, 100, 150 and 200 kg ha-1), two different times of nitrogen application and one additional treatment without nitrogen were taken as factors. The nymphal phases, the pre-reproductive, reproductive and pos-reproductive periods, longevity, the life cycle and fecundity of the cotton aphid were evaluated. The doses of nitrogen influenced the cotton aphid biology in both sources and times of application, favoring its development and fecundity. (author)

  10. Effects of Wheat and Faba Bean Intercropping on Microorganism Involved in Nitrogen Transformation in the Rhizosphere Soils

    Directory of Open Access Journals (Sweden)

    TANG Yan-fen

    2016-09-01

    Full Text Available Soil microorganism is one of the key factors that affects soil ecological activity. It is an important symbol of soil health, and the soil nitrogen cycle is closely related to the microorganisms. The relationship between nitrogen and microorganisms under the intercropping is im-portant for the farmland ecosystem. In this paper, phospholipid fatty acids(PLFA analysis was used to determine soil microbial communi-ties, e.g., biomasses of anaerobic bacteria, aerobic bacteria, bacteria, fungi and actinobacteria. The abundance of nitrifying genes(AOB, AOA and three denitrifying genes (nirK, norB, nosZ were measured using real-time quantitative polymerase chain reaction. The enzymes, nitrate and ammonium concentrations were measured using conventional methods. The results showed that along with the growth period, the TPLFAs(total phospholipid fatty acids increased and the bacterias, fungus, actinomyces and aerobic bacterias significantly(P<0.05 dif-fered between intercropping and monoculture. The greater abundance of AOB than AOA and the variation range of 105~106 were observed in all samples. The gene copies of norB and nosZ were pronounced by intercropping in the rhizosphere of faba bean at elongation and heading stages, respectively. The abundance of nirK remarkably(P<0.05differed between intercropping and monoculture. In intercropping rhizo-sphere, the contents of NO3--N were lower than monoculture, while the NH4+-N contents were converse (P<0.05. Conclusively, wheat and fa-ba bean intercropping system could change rhizosphere microenvironment, and then the microbial community structure in the soils, which would facilitate the conservation and supplying of soil nitrogen and reduce the nitrogen loss and pollution under the intercropping conditions to some extent. This might be the nitrogen nutrition mechanism for the overyielding of wheat and faba bean intercropping system.

  11. Simulation of nitrate-concentration variation and estimation of nitrogen-form transformation in groundwater by modified rain-runoff model

    Science.gov (United States)

    Hong, N.; Hama, T.; Suenaga, Y.; Huang, X.; Wei, Q.; Kawagoshi, Y.

    2015-12-01

    Groundwater is an important drinking-water source throughout the world. Nitrate is considered as one of the most widespread contaminant in groundwater and some studies have presented that intake of excess amount of nitrate could be associated with several types of disease. Modeling of nitrate-concentration in groundwater and estimation of nitrogen-form transformation by meteorological effects is necessary for countermeasure to nitrate contamination in groundwater. In this research, groundwater-quality tank model (GQTM) coupled with Fuzzy Optimize Method (FOM) and Shuffled Complex Evolution-University of Arizona (SCE-UA) is proposed to simulate NO3- and Cl- concentrations simultaneously. For the simulation, daily precipitation data and weekly data of NO3- and Cl- concentrations at two observation wells in Kumamoto City for three years (2012-2015) were used. The GQTM coupled with FOM and SCE-UA algorithm provided accurate simulation results in the variations of NO3- and Cl- concentrations. Difference in the concentration-variation ratio between NO3- and Cl- suggested that NO3- concentration variation was mainly due to dilution and concentration processes rather than nitrogen transformation by nitrification-denitrification reaction in the both observation wells. This calculation provides a simple and reliable method in nitrification and denitrification process estimation. The GQTM coupled with FOM and SCE-UA must be useful for managing of groundwater supplies in effective and sustainable manner by providing scientific evidence for the risk of groundwater quality.

  12. 两种硝化抑制剂对土壤氮转化的影响%Effects of two nitrification inhibitors on transformations of nitrogen in soil

    Institute of Scientific and Technical Information of China (English)

    宁建凤; 崔理华; 艾绍英; 王荣辉; 姚建武; 李盟军; 曾招兵; 王思源

    2015-01-01

    Nitrification inhibitor has been proved to be effective in retarding nitrification process of nitrogen in the soil. Application of nitrification inhibitors to the field is considered to be a major method in controlling nonpoint pollution induced by nitrogen fertilizer in agricultural production. Dicyandiamide and thiosulfate are two types of nitrification inhibitors widely used throughout the world. A large number of studies have been carried out on dicyandiamide and thiosulfate focusing on their inhibitory effects. Till now, very limited information is available on the comparative effects of dicyandiamide and thiosulfate on transformations of nitrogen in the soil. The aim of this experiment was to investigate the effects of nitrification inhibitor dicyandiamide, potassium thiosulfate and their combination on the changes of mineral nitrogen, nitrification process and nitrogen recovery in the soil. A forty-day incubation experiment was conducted under the laboratory conditions (20℃). The experiment included unfertilized control, soil appended with urea nitrogen of 200 mg/kg alone, soil appended with urea nitrogen and dicyandiamide of 40 mg/kg, soil appended with urea nitrogen and potassium thiosulfate of 64 mg/kg, and soil appended with urea nitrogen and two inhibitors. Soil moisture in different treatments remained 60 percent of field water capacity. During the experimental period, soil samples were collected dynamically and the contents of mineral nitrogen such as nitrate nitrogen, ammonium nitrogen and nitrite nitrogen were analyzed. The result showed that an active nitrification process was found in the soil appended with nitrogen without nitrification inhibitors, where 77.7 percent of NH4+-N in applied nitrogen disappeared from the mineral nitrogen pool during the whole incubation period of 40 d. It was estimated that 56.6 percent of applied nitrogen was accumulated as NO3--N. Addition of nitrification inhibitors dicyandiamide and potassium thiosulfate

  13. A biologically plausible transform for visual recognition that is invariant to translation, scale and rotation

    Directory of Open Access Journals (Sweden)

    Pavel eSountsov

    2011-11-01

    Full Text Available Visual object recognition occurs easily despite differences in position, size, and rotation of the object, but the neural mechanisms responsible for this invariance are not known. We have found a set of transforms that achieve invariance in a neurally plausible way. We find that a transform based on local spatial frequency analysis of oriented segments and on logarithmic mapping, when applied twice in an iterative fashion, produces an output image that is unique to the object and that remains constant as the input image is shifted, scaled or rotated.

  14. Characterization of salt tolerance in ectoine-transformed tobacco plants (Nicotiana tabaccum): photosynthesis, osmotic adjustment, and nitrogen partitioning.

    Science.gov (United States)

    Moghaieb, R E A; Tanaka, N; Saneoka, H; Murooka, Y; Ono, H; Morikawa, H; Nakamura, A; Nguyen, N T; Suwa, R; Fujita, K

    2006-02-01

    Ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid) biosynthetic genes (ect. ABC) from Halomonas elongata were introduced to tobacco plants using an Agrobacterium-mediated gene delivery system. The genes for ectoine biosynthesis were integrated in a stable manner into the tobacco genome and the corresponding transcripts were expressed. The concentration of ectoine under salt-stress conditions was higher in the roots than in leaves. A close relationship was found between stomatal conductance and the amount of transported nitrogen, suggesting that water transport through the xylem in the stem and transpiration may be involved in nitrogen transport to leaves. The data indicate that the turgor values of the ectoine transgenic lines increased with increasing salt concentration. The data revealed two ways in which ectoine enhanced salinity tolerance of tobacco plants. First, ectoine improved the maintenance of root function so that water is taken up consistently and supplied to shoots under saline conditions. Second, ectoine enhanced the nitrogen supply to leaves by increasing transpiration and by protecting Rubisco proteins from deleterious effects of salt, thereby improving the rate of photosynthesis.

  15. Alpha process with biological elimination of nitrogen. Application of mathematical models; Proceso alpha con eliminacion biologica de nitrogeno. Aplicacion de modelos matematicos

    Energy Technology Data Exchange (ETDEWEB)

    Rodriguez, J. C.; Lopez-Carrasco, M. D.; Cortacans, J. A.; Larrea, L.; Larrea, A.

    1999-07-01

    This article illustrates the advantages of a step feed process for the biological elimination of nitrogen by presenting the experiments carried out by INFILCO at a pilot plant in San Sebastian. This arrangement, also known as the alpha (alternative phase step feed) process, reduces the volume of the biological reactor, eliminates the need for internal recycling and optimised the consumption of the organic matter used for denitrication. This article also demonstrates the possibility of employing a mathematical model as a tool in assessing, designing and operating full scale treatment plants for typically urban sewage. (Author) 6 refs.

  16. Microfauna communities as performance indicators for an A/O Shortcut Biological Nitrogen Removal moving-bed biofilm reactor.

    Science.gov (United States)

    Canals, O; Salvadó, H; Auset, M; Hernández, C; Malfeito, J J

    2013-06-01

    The microfauna communities present in the mixed liquor and biofilm of an Anoxic/Oxic Shortcut Biofilm Nitrogen Removal moving-bed biofilm process were characterised in order to optimise process control through the use of bioindicators. The system operated at high ammonium concentrations, with an average of 588 ± 220 mg N-NH4(+) L(-1) in the influent, 161 ± 80 mg L(-1) in the anoxic reactor and 74 ± 71.2 mg L(-1) in the aerobic reactor. Up to 20 different taxa were identified, including ciliates (4), flagellates (11), amoebae (4) and nematodes (1). Compared to conventional wastewater treatment processes (WWTPs), this process can be defined as a flagellates-predominant system with a low diversity of ciliates. Flagellates were mainly dominant in the mixed liquor, demonstrating high tolerance to ammonium and the capacity for survival over a long time under anoxic conditions. The data obtained provide interesting values of maximum and minimum tolerance ranges to ammonium, nitrates and nitrites for the ciliate species Cyclidium glaucoma, Colpoda ecaudata, Vorticella microstoma-complex and Epistylis cf. rotans. The last of these was the only ciliate species that presented a constant and abundant population, almost exclusively in the aerobic biofilm. Epistylis cf. rotans dynamics showed a high negative correlation with ammonium variations and a positive correlation with ammonium removal efficiency. Hence, the results indicate that Epistylis cf. rotans is a good bioindicator of the nitrification process in this system. The study of protozoan communities in unexplored WWTPs sheds light on species ecology and their role under conditions that have been little studied in WWTPs, and could offer new biological management tools.

  17. Microbial nitrous oxide production and nitrogen cycling associated with aquatic invertebrates

    OpenAIRE

    Heisterkamp, Ines

    2012-01-01

    Nitrogen cycling is intimately linked to the activity of microorganisms that mediate the diverse nitrogen transformations and play a fundamental role in regulating the fate of nitrogen in the Earth s terrestrial and aquatic ecosystems. Microbial activity is influenced by physical, chemical, and biological factors that can be profoundly shaped by macrofaunal organisms, especially in benthic aquatic systems. This thesis therefore aimed at investigating the interactions between microorganisms an...

  18. A Response to "BIO 2010: Transforming Undergraduate Education for Future Research Biologists," from the Perspective of the Biochemistry and Molecular Biology Major Program at Kenyon College

    Science.gov (United States)

    Slonczewski, Joan L.; Marusak, Rosemary

    2004-01-01

    The National Research Council completed a major study of undergraduate biology education, "BIO 2010-Transforming Undergraduate Education For Future Research Biologists (BIO 2010)," funded by the Howard Hughes Medical Institute and the National Institutes of Health. The "BIO 2010" report recommends that biology pedagogy should use an…

  19. Anaerobic Nitrogen Fixers on Mars

    Science.gov (United States)

    Lewis, B. G.

    2000-07-01

    The conversion of atmospheric nitrogen gas to the protein of living systems is an amazing process of nature. The first step in the process is biological nitrogen fixation, the transformation of N2 to NH3. The phenomenon is crucial for feeding the billions of our species on Earth. On Mars, the same process may allow us to discover how life can adapt to a hostile environment, and render it habitable. Hostile environments also exist on Earth. For example, nothing grows in coal refuse piles due to the oxidation of pyrite and marcasite to sulfuric acid. Yet, when the acidity is neutralized, alfalfa and soybean plants develop root nodules typical of symbiotic nitrogen fixation with Rhizobium species possibly living in the pyritic material. When split open, these nodules exhibited the pinkish color of leghemoglobin, a protein in the nodule protecting the active nitrogen-fixing enzyme nitrogenase against the toxic effects of oxygen. Although we have not yet obtained direct evidence of nitrogenase activity in these nodules (reduction of acetylene to ethylene, for example), these findings suggested the possibility that nitrogen fixation was taking place in this hostile, non-soil material. This immediately raises the possibility that freeliving anaerobic bacteria which fix atmospheric nitrogen on Earth, could do the same on Mars.

  20. Myelofibrotic transformations of polycythemia vera and essential thrombocythemia are morphologically, biologically, and prognostically indistinguishable from primary myelofibrosis.

    Science.gov (United States)

    Sangle, Nikhil; Cook, Josh; Perkins, Sherrie; Teman, Carolin J; Bahler, David; Hickman, Kimberly; Wilson, Andrew; Prchal, Josef; Salama, Mohamed E

    2014-10-01

    A fraction of polycythemia vera (PV) and essential thrombocythemia (ET) cases will, in time, undergo myelofibrotic transformation. In such cases, fibrosis may mask the diagnostic histologic features of the original underlying myeloproliferative neoplasm. Thus, confidently differentiating postfibrotic PV/ET from primary myelofibrosis (PMF) histologically may not be possible. It is controversial whether post-PV/ET myelofibrosis (MF) differs clinicopathologically from PMF, or whether these entities are biologically, clinically, and prognostically indistinguishable. To answer this question, we compared multiple candidate biological, morphologic, and prognostic parameters between 19 postfibrotic ET/PV individuals and 18 PMF individuals. The postfibrotic ET/PV and PMF cases did not differ with regard to clinical outcome, cytogenetic abnormalities, serum lactate dehydrogenase level, peripheral blast count, bone marrow morphology, or grade of reticulin fibrosis. Only JAK2 allele burden, which was higher in the postfibrotic PV/ET population (P=0.011), differed between the 2 groups. Cardinal morphologic features of PMF (ie, marrow cellularity, intrasinusoidal hematopoiesis, osteosclerosis, etc.) were commonly observed in post-PV/ET MF marrow biopsies, and only a minority of post-PV/ET MF marrow biopsies the retained diagnostic features of the primary myeloproliferative neoplasm (panmyelosis in PV and megakaryocytic hyperplasia in ET). Our study indicates that PMF and post-PV/ET MF are clinically and biologically indistinguishable.

  1. Co-composting of distillery wastes with animal manures: carbon and nitrogen transformations in the evaluation of compost stability.

    Science.gov (United States)

    Bustamante, M A; Paredes, C; Marhuenda-Egea, F C; Pérez-Espinosa, A; Bernal, M P; Moral, R

    2008-06-01

    The aim of this work was to study the viability of recycling the solid wastes generated by the winery and distillery industry by means of co-composting with animal manures, as well as to evaluate the quality of the composts obtained. Two piles, using exhausted grape marc and cattle manure or poultry manure, respectively (at ratios, on a fresh weight basis, of 70:30), were composted by the Rutgers static pile composting system. Throughout the composting process, a number of parameters were monitored, such as pH, electrical conductivity, organic matter, water-soluble carbon, water-soluble polyphenols, different forms of nitrogen (organic nitrogen, ammonium and nitrate) and humification indices (humification ratio, humification index, percentage of humic acid-like C, polymerisation ratio and cation exchange capacity), as well as the germination index. Organic matter losses followed first-order kinetics equation in both piles, the highest organic matter mineralisation rate being observed with exhausted grape marc and cow manure. On the other hand, the mixture with the lowest C/N ratio, using exhausted grape marc and poultry manure, showed the highest initial ammonium contents, probably due to the higher and more labile N content of poultry manure. The increase in the cation exchange capacity revealed the organic matter humification during composting. In contrast, other humification parameters, such as the humification ratio and the humification index, did not show the expected evolution and, thus, could not be used to assess compost maturity. Composting produced a degradation of the phytotoxic compounds, such as polyphenols, to give composts without a phytotoxic character. Therefore, composting can be considered as an efficient treatment to recycle this type of wastes, due to composts presented a stable and humified organic matter and without phytotoxic effects, which makes them suitable for their agronomic use.

  2. Responses of Azospirillum brasilense to nitrogen deficiency and to wheat lectin: a diffuse reflectance infrared fourier transform (DRIFT) spectroscopic study.

    Science.gov (United States)

    Kamnev, Alexander A; Sadovnikova, Julia N; Tarantilis, Petros A; Polissiou, Moschos G; Antonyuk, Lyudmila P

    2008-11-01

    For the rhizobacterium Azospirillum brasilense, the optimal nutritional range of C:N ratios corresponds to the presence of malate (ca. 3 to 5 g l(-1) of its sodium salt) and ammonium (ca. 0.5 to 3 g l(-1) of NH4Cl) as preferred carbon and nitrogen sources, respectively. This microaerophilic aerotactic bacterium is known to have a narrow optimal oxygen concentration range of ca. 3 to 5 microM, which is 1.2% to 2% of oxygen solubility in air-saturated water under normal conditions. In this work, the effects of stress conditions (bound-nitrogen deficiency related to a high C:N ratio in the medium; excess of oxygen) on aerobically grown A. brasilense Sp245, a native wheat-associated endophyte, were investigated in the absence and presence of wheat germ agglutinin (WGA, plant stress protein and a molecular host-plant signal for the bacterium) using FTIR spectroscopy of whole cells in the diffuse reflectance mode (DRIFT). The nutritional stress resulted in the appearance of prominent spectroscopic signs of poly-3-hydroxybutyrate (PHB) accumulation in the bacterial cells; in addition, splitting of the amide I band related to bacterial cellular proteins indicated some stress-induced alterations in their secondary structure components. Similar structural changes were observed in the presence of nanomolar WGA both in stressed A. brasilense cells and under normal nutritional conditions. Comparative analysis of the data obtained and the relevant literature data indicated that the stress conditions applied (which resulted in the accumulation of PHB involved in stress tolerance) and/or the presence of nanomolar concentrations of WGA induced synthesis of bacterial cell-surface (glyco)proteins rich in beta-structures, that could be represented by hemagglutinin and/or porin.

  3. Nitrogen transformation intensity in wetland plant rhizosphere area at low temperature%低温域湿地植物根际氮转化强度

    Institute of Scientific and Technical Information of China (English)

    黄娟; 李稹; 张健; 朱砺之; 崔明勋; 李卓宪

    2011-01-01

    在低温条件下(0 ~15℃),对菖蒲、芦苇、香蒲等10种湿地植物根际土壤的氮转化强度进行对比分析.结果表明,湿地植物根际氨化、反硝化作用强度随温度下降而逐渐降低,硝化作用强度在10℃左右出现大幅下降;低温域植物根际反硝化作用强度明显高于硝化作用强度;植物种类对根际土壤氨化、硝化作用强度影响较大,其中香蒲氨化作用强度最大(0.85 mg/( kg·h))、慈姑硝化作用强度最大(0.21 mg/(kg·h));植物种类对反硝化作用强度及pH值无明显影响.通过综合评价,低温域香蒲、千屈菜、芦苇根际氮转化强度较强,可作为提高湿地冬季脱氮率的优选耐寒植物.%Nitrogen transformation intensity in rhizosphere soil of ten different wetland plants, such as acorus calamus, phragmites australis and typha orientalis, at low temperatures(0 to 15 ℃) are compared in this paper. The results indicated that: intensity of ammonification and denitrification decrease with decreasing temperature; nitrification intensity decrease sharply while the temperature is under 10 ℃; denitrification intensity is obviously higher than nitrification intensity in plants rhizosphere; the difference of plant species has great impact on ammonification and nitrification intensity; typha orientalis has the strongest ammonification which is 0. 85 mg/(kg ·h) , while sagittaria sagittifolia has the strongest nitrification which is 0. 21 mg/( kg · H) ; plant species has no obvious effect on denitrification and pH in rhizosphere soil. After the comprehensive assessment, typha orientalis, lythrum salicaria and phragmites australis are selected out for nitrogen removal in wetlands at low temperature because of their stronger nitrogen transformation strength in rhizosphere soil.

  4. InCoB2014: mining biological data from genomics for transforming industry and health.

    Science.gov (United States)

    Schönbach, Christian; Tan, Tin; Ranganathan, Shoba

    2014-01-01

    The 13th International Conference on Bioinformatics (InCoB2014) was held for the first time in Australia, at Sydney, July 31-2 August, 2014. InCoB is the annual scientific gathering of the Asia-Pacific Bioinformatics Network (APBioNet), hosted since 2002 in the Asia-Pacific region. Of 106 full papers submitted to the BMC track of InCoB2014, 50 (47.2%) were accepted in BMC Bioinformatics, BMC Genomics and BMC Systems Biology supplements, with three papers in a new BMC Medical Genomics supplement. While the majority of presenters and authors were from Asia and Australia, the increasing number of US and European conference attendees augurs well for the international flavour of InCoB. Next year's InCoB will be held jointly with the Genome Informatics Workshop (GIW), September 9-11, 2015 in Tokyo, Japan, with a view to integrate bioinformatics communities in the region.

  5. The Enzymology of Organic Transformations: A Survey of Name Reactions in Biological Systems.

    Science.gov (United States)

    Lin, Chia-I; McCarty, Reid M; Liu, Hung-Wen

    2017-03-20

    Chemical reactions that are named in honor of their true, or at least perceived, discoverers are known as "name reactions". This Review is a collection of biological representatives of named chemical reactions. Emphasis is placed on reaction types and catalytic mechanisms that showcase both the chemical diversity in natural product biosynthesis as well as the parallels with synthetic organic chemistry. An attempt has been made, whenever possible, to describe the enzymatic mechanisms of catalysis within the context of their synthetic counterparts and to discuss the mechanistic hypotheses for those reactions that are currently active areas of investigation. This Review has been categorized by reaction type, for example condensation, nucleophilic addition, reduction and oxidation, substitution, carboxylation, radical-mediated, and rearrangements, which are subdivided by name reactions.

  6. Enhancing Student Success in Biology, Chemistry, and Physics by Transforming the Faculty Culture

    Science.gov (United States)

    Jackson, Howard; Smith, Leigh; Koenig, Kathleen; Beyette, Jill; Kinkle, Brian; Vonderheide, Anne

    We present preliminary results of an effort to enhance undergraduate student success in the STEM disciplines. We explore a multistep approach that reflects recent literature and report initial results by each of the Departments of Biology, Chemistry, and Physics of implementing several change strategies. The central elements of our approach involve identified departmental Teaching and Learning Liaisons, a unique faculty development component by our teaching center, a vertical integration of leadership across department heads, the Dean, and the Provost, and the explicit acknowledgement that change happens locally. Teaching and Learning lunches across the departments have attracted an attendance of ~65% of the faculty. The use of Learning Assistants in classrooms has also increased sharply. Modest changes in the student success rates have been observed. These efforts and others at the decanal and provostal levels promise changes in student success. We acknowledge the financial support of the National Science Foundation through DUE 1544001 and 1431350.

  7. Role of Carbon Substrates Added in the Transformation of Surplus Nitrate to Organic Nitrogen in a Calcareous Soil

    Institute of Scientific and Technical Information of China (English)

    QIU Shao-Jun; JU Xiao-Tang; J.INGWERSEN; GUO Zi-De; C.F.STANGE; R.BISHARAT; T.STRECK

    2013-01-01

    Excessive amounts of nitrate have accumulated in many soils on the North China Plain due to the large amounts of chemical N fertilizers or manures used in combination with low carbon inputs.We investigated the potential of different carbon substrates added to transform soil nitrate into soil organic N (SON).A 56-d laboratory incubation experiment using the 15N tracer (K15NO3)technique was carried out to elucidate the proportion of SON derived from accumulated soil nitrate following amendment with glucose or maize straw at controlled soil temperature and moisture.The dynamics and isotopic abundance of mineral N (NO3-and NH4+) and SON and greenhouse gas (N2O and CO2) emissions during the incubation were investigated.Although carbon amendments markedly stimulated transformation of nitrate to newly formed SON,this was only a substitution effect of the newly formed SON with native SON because SON at the end of the incubation period was not significantly different (P > 0.05) from that in control soil without added C.At the end of the incubation period,amendment with glucose,a readily available C source,increased nitrate immobilization by 2.65 times and total N2O-N emission by 33.7 times,as compared with maize straw amendment.Moreover,the differences in SON and total N2O-N emission between the treatments with glucose and maize straw were significant (P < 0.05).However,the total N2O-N emission in the straw treatment was not significantly (P > 0.05) greater than that in the control.Straw amendment may be a potential option in agricultural practice for transformation of nitrate N to SON and minimization of N2O emitted as well as restriction of NO3-N leaching.

  8. Long-term population dynamics and in situ physiology in activated sludge systems with enhanced biological phosphorus removal operated with and without nitrogen removal

    DEFF Research Database (Denmark)

    Lee, N.; Nielsen, P.H.; Aspegren, H.

    2003-01-01

    Quantitative fluorescence in situ hybridization (FISH) and the combination of FISH with microautoradiography (MAR) were used in order to study the long-term population dynamics (2.5 years) and the in situ physiology in two parallel activated sludge pilot systems with enhanced biological phosphorus...... removal (EBPR). The two systems received the same influent wastewater, but were differently operated (with and without nitrogen removal, respectively). Both systems showed a significant P removal that increased when different substrates (phosphorus (P), acetate and glucose, respectively) were added....... However, we observed a lower correlation (0.9). The Actinobacteria were the only additional group of bacteria which showed a similar degree of correlation to the P content in activated sludge as the Rhodocyclus-related bacteria - but only for the system without nitrogen removal. Significant amounts (less...

  9. Quantitative analysis of biological tissues using Fourier transform-second-harmonic generation imaging

    Science.gov (United States)

    Ambekar Ramachandra Rao, Raghu; Mehta, Monal R.; Toussaint, Kimani C., Jr.

    2010-02-01

    We demonstrate the use of Fourier transform-second-harmonic generation (FT-SHG) imaging of collagen fibers as a means of performing quantitative analysis of obtained images of selected spatial regions in porcine trachea, ear, and cornea. Two quantitative markers, preferred orientation and maximum spatial frequency are proposed for differentiating structural information between various spatial regions of interest in the specimens. The ear shows consistent maximum spatial frequency and orientation as also observed in its real-space image. However, there are observable changes in the orientation and minimum feature size of fibers in the trachea indicating a more random organization. Finally, the analysis is applied to a 3D image stack of the cornea. It is shown that the standard deviation of the orientation is sensitive to the randomness in fiber orientation. Regions with variations in the maximum spatial frequency, but with relatively constant orientation, suggest that maximum spatial frequency is useful as an independent quantitative marker. We emphasize that FT-SHG is a simple, yet powerful, tool for extracting information from images that is not obvious in real space. This technique can be used as a quantitative biomarker to assess the structure of collagen fibers that may change due to damage from disease or physical injury.

  10. [The research-study of pneumococci transformation in the laboratory, and the rise of bacterial genetics and molecular biology].

    Science.gov (United States)

    Carrada-Bravo, Teodoro

    2016-02-01

    The virulence of pneumococci for mice depends on the production of a polysaccharide-capsule, which encloses the bacteria and protects it against phagocytosis. Capsulated pneumococci yield smooth, brilliant colonies designated S, but mutant strains arise frequently which have lost the capacity to sinthetise the capsule, are avirulent and rough designated R. F. Griffith discovery of bacterial "transformation" in 1928, is a landmark in the history of genetics, because hereditary determinants could be transferred from one bacteria to another, and laid the foundation for the subsequent recognition of deoxyribonucleic acid (DNA) as the hereditary material. A systematic analysis of the chemical nature of the "transforming principle", by O. T. Avery and his colleagues during next 10 years, culminated in a formidable weight of evidence that it possessed all properties of DNA. In 1953, J. D. Watson and F. H. C Crick by a brilliant synthesis, fitted the chemical X-ray diffraction data together into a symmetrical double-helix structure, which possessed the inherent properties of genetic material, and carries the information necessary to direct all biochemical-cellular activities and self-replications. This paper describes de early rise and development of bacterial genetics and molecular biology.

  11. Spectral evidence of spinodal decomposition, phase transformation and molecular nitrogen formation in supersaturated TiAlN films upon annealing

    Energy Technology Data Exchange (ETDEWEB)

    Endrino, J.L., E-mail: jlendrino@icmm.csic.es [Instituto de Ciencia de Materiales de Madrid, Consejo Superior de Investigaciones Cientificas, E-28049 Madrid (Spain); Arhammar, C. [Sandvik Tooling AB, R and D, Lerkrogsvaegen 13, 126 80 Stockholm (Sweden); Gutierrez, A. [Departamento de Fisica Aplicada and Instituto de Ciencia de Materiales Nicolas Cabrera, Universidad Autonoma de Madrid, E-28049 Madrid (Spain); Gago, R. [Instituto de Ciencia de Materiales de Madrid, Consejo Superior de Investigaciones Cientificas, E-28049 Madrid (Spain); Horwat, D. [Institut Jean Lamour, Ecole des Mines de Nancy, Parc de Saurupt, 54042 Nancy (France); Soriano, L. [Departamento de Fisica Aplicada and Instituto de Ciencia de Materiales Nicolas Cabrera, Universidad Autonoma de Madrid, E-28049 Madrid (Spain); Fox-Rabinovich, G. [McMaster University, Hamilton, Ontario, Canada L8S 4L7 (Canada); Martin y Marero, D. [Departamento de Fisica Aplicada and Instituto de Ciencia de Materiales Nicolas Cabrera, Universidad Autonoma de Madrid, E-28049 Madrid (Spain); Fundacion Parque Cientifico de Madrid, Campus de Cantoblanco, 28049 Madrid (Spain); Centro de Microanalisis de Materiales, Universidad Autonoma de Madrid, 28049 Madrid (Spain); Guo, J. [Advanced Light Source, Lawrence Berkeley National Laboratory, 1 Cyclotron Rd., Berkeley, CA 94720 (United States); Rubensson, J.-E. [Department of Physics and Astronomy, Uppsala University, Box 516, S-75120 Uppsala (Sweden); Andersson, J. [Angstrom Laboratory, Uppsala University, S-75121 Uppsala (Sweden)

    2011-09-15

    Thermal treatment of supersaturated Ti{sub 1-x}Al{sub x}N films (x {approx} 0.67) with a dominant ternary cubic-phase were performed in the 700-1000 {sup o}C range. Grazing incidence X-ray diffraction (GIXRD) shows that, for annealing temperatures up to 800 {sup o}C, the film structure undergoes the formation of coherent cubic AlN (c-AlN) and TiN (c-TiN) nanocrystallites via spinodal decomposition and, at higher temperatures ({>=}900 {sup o}C), GIXRD shows that the c-AlN phase transforms into the thermodynamically more stable hexagonal AlN (h-AlN). X-ray absorption near-edge structure (XANES) at the Ti K-edge is consistent with spinodal decomposition taking place at 800 deg. while Al K-edge and N K-edge XANES and X-ray emission data show the nucleation of the h-AlN phase at temperatures >800 deg. C, in agreement with the two-step decomposition process for rock-salt structured TiAlN, which was also supported by X-ray diffraction patterns and first-principle calculations. Further, the resonant inelastic X-ray scattering technique near the N K-edge revealed that N{sub 2} is formed as a consequence of the phase transformation process.

  12. Discussion on Biological Nitrogen Removal in Treatment of High Ammonia Nitrogen Wastewater Using MBR%MBR 处理高浓度氨氮废水中生物脱氮问题的探讨

    Institute of Scientific and Technical Information of China (English)

    崔喜勤; 林君锋

    2016-01-01

    在以好氧膜生物反应器( MBR)处理高浓度氨氮废水的试验研究中,针对系统获得极高生物硝化率(氨氮的去除率基本保持在99%以上)的原因、试验初期出现的亚硝态氮积累现象、试验中期总氮去除效果高于理论值的原因三个方面进行了详细分析,结果表明, MBR的运行特点是其实现完全硝化的重要保证,高浓度氨条件下的亚硝化过程是不稳定的,微生物合成代谢对总氮的去除有一定贡献。%In the experiment of treatment of wastewater with high concentration of ammonia nitrogen by a membrane bioreactor , the reason of high biological nitrification rate , the accumulation of nitrite nitrogen in initial experiment and the causation of higher removal rate of total nitrogen than theoretical result in mid test were discussed .The results showed that the operating characteristics of MBR was very key for complete nitrification , nitrosation process was unstabitily under high concentration of ammonia , microbial synthesis and metabolism had the contribution for removal of total nitrogen.

  13. Effect of amended soil and hydraulic load on enhanced biological nitrogen removal in lab-scale SWIS.

    Science.gov (United States)

    Zou, J L; Dai, Y; Sun, T H; Li, Y H; Li, G B; Li, Q Y

    2009-04-30

    To characterize the effect of amended soil on nitrogen removal in subsurface wastewater infiltration system (SWIS), culture, grass carbon, and zeolite were mixed to produce microbial inoculums, and then the optimal microbial inoculums, nutrient substance, cinder, and original soil were mixed to produce the soils through bioaugmentation. Results indicate that the microbial inoculums (culture+50% grass carbon+50% zeolite) and the amended soil (12.5% microbial inoculums+25% nutrient substrate+12.5% cinder+50% original soil) have the optimal biogenic stimulating properties, and the adsorption capacity of the amended soil are 1.216 mg-Pg(-1) and 0.495 mg-Ng(-1). The laboratory soil column experiment indicates that the efficient mode of nitrogen removal in lab-scale SWIS is adsorption-nitrification-denitrification and the nitrification/denitrification can be enhanced by the application of the amended soil. On average, the SWIS filled with amended soil converts 85% of ammonia nitrogen (NH(4)(+)-N) to NO(x)(-)-N and removes 49.8-60.6% of total nitrogen (TN), while the system filled with original soil removes 80% of NH(4)(+)-N and 31.3-43.2% of TN at 4-8 cm day(-1). Two systems are overloads at 10 cm day(-1). It is concluded that the microbial activities and nitrogen removal efficiencies are improved in SWIS after bioaugmentation.

  14. 污水生物脱氮除磷新技术%New Technology of Biological Nitrogen and Phosphorus Removal in Sewage

    Institute of Scientific and Technical Information of China (English)

    丛晓东; 吕勇; 王肇君

    2012-01-01

    首先简单阐述了生物脱氮除磷机理,然后重点介绍了目前几种污水生物处理新技术:厌氧/缺氧/好氧MBR工艺、短程硝化反硝化工艺和倒置A2/O工艺等,最后对污水生物脱氮除磷技术的发展进行了展望,并提出了一些建议。%In the first part,the mechanism of biological nitrogen and phosphorus removal is simply explained firstly,and then several new technology of sewage biological disposal,such as anoxic/anaerobic/aerobic membrane bioreactor(MBR) process、shortcut nitrification—denitrification process and reversed A2/O process are introduced.In the end,the paper generalized the development of new technology of biological nitrogen and phosphorus removal in sewage,and some suggestions are put forward.

  15. Solubilization of Waste Activated Sludge and Nitrogenous Compounds Transformation During Solubilization by Thermophilic Enzyme (S-TE) Process.

    Science.gov (United States)

    Yang, Qi; Luo, Kun; Li, Xiao-ming; Zhong, Yu; Chen, Hong-bo; Yang, Guo-jing; Shi, Yan-wei; Zeng, Guang-ming

    2015-06-01

    A representative thermophilic bacterial strain (AT06-1) capable of secreting protease was isolated from thermophilic aerobic digestion reactor, and 16S rRNA gene analysis indicated that it was Bacillus sp. The isolated strain was inoculated in waste activated sludge (WAS) to evaluate the performance of solubilization by thermophilic enzyme (S-TE) process under aerobic or microaerobic conditions at different temperatures (55-70 °C). Results showed that the inoculation of specific thermophilic strain significantly affected the volatile suspended solids (VSS) removal. At the optimal temperature of 65 °C, the maximum VSS removal of 43.6 % and highest SCOD of 4475 mg/L was achieved during microaerobic S-TE process. Compared to the noninoculation, more soluble protein was released during S-TE process due to the higher protease activity associated with the protein hydrolysis originated from cell lysis. The protease activity at aerobic and microaerobic S-TE process was respectively 1.73 and 1.88 times that of the noninoculation. Ammonia was the end nitrogenous compound of protein hydrolysis during S-TE process, which was stripped from the digestion system through continuous aeration.

  16. Impact of land-use management on nitrogen transformation in a mountain forest ecosystem in the north of Iran

    Institute of Scientific and Technical Information of China (English)

    Maryam Asadiyan; Seyed Mohammad Hojjati; Mohammad reza Pourmajidian; Asghar fallah

    2013-01-01

    Soil inorganic N is one of the most important soil quality indexes,which may be influenced by land-use change.The historical conversion of land-use from native vegetation to agriculture resulted in sharp declines in soil N dynamics.This study was conducted to determine the soil inorganic N concentrations and net N mineralization rate in four common types of land-uses in the mountain forest area in the north of Iran,namely arable land,pine plantation,ash plantation,and beech stand.The soil samples were taken from top mineral soil layer (5 cm) in each site randomly (n=6) during August-September 2010.Beech stand and ash plantation showed significantly higher total nitrogen compared with arable land and pine plantation,while extractable NH4+-N concentration was significantly greater in Beech stand compare to arable soils (p<0.05).No significantly difference was found in Net N mineralization,net nitrification and net ammonification rates among different land-uses.Results showed that net N mineralization and ammonification were occurred just in the soil of Ash plantation during the incubation time.Our findings suggested that conversion of Hyrcanian forests areas to pine plantation and agricultural land can disrupt soil natural activities and affect extremely soil quality.

  17. Determining Chemical Reactivity Driving Biological Activity from SMILES Transformations: The Bonding Mechanism of Anti-HIV Pyrimidines

    Directory of Open Access Journals (Sweden)

    Mihai V. Putz

    2013-07-01

    Full Text Available Assessing the molecular mechanism of a chemical-biological interaction and bonding stands as the ultimate goal of any modern quantitative structure-activity relationship (QSAR study. To this end the present work employs the main chemical reactivity structural descriptors (electronegativity, chemical hardness, chemical power, electrophilicity to unfold the variational QSAR though their min-max correspondence principles as applied to the Simplified Molecular Input Line Entry System (SMILES transformation of selected uracil derivatives with anti-HIV potential with the aim of establishing the main stages whereby the given compounds may inhibit HIV infection. The bonding can be completely described by explicitly considering by means of basic indices and chemical reactivity principles two forms of SMILES structures of the pyrimidines, the Longest SMILES Molecular Chain (LoSMoC and the Branching SMILES (BraS, respectively, as the effective forms involved in the anti-HIV activity mechanism and according to the present work, also necessary intermediates in molecular pathways targeting/docking biological sites of interest.

  18. Tracking short-term effects of nitrogen-15 addition on nitrous oxide fluxes using fourier-transform infrared spectroscopy.

    Science.gov (United States)

    Phillips, Rebecca; Griffith, David W T; Dijkstra, Feike; Lugg, Glenys; Lawrie, Roy; Macdonald, Ben

    2013-09-01

    Synthetic fertilizer N additions to soils have significantly increased atmospheric NO concentrations, and advanced methods are needed to track the amount of applied N that is transformed to NO in the field. We have developed a method for continuous measurement of NO isotopologues (NNO, NNO, NNO, and NNO) following 0.4 and 0.8 g N m of N-labeled substrate as KNO or urea [CO(NH)] using Fourier-transform infrared (FTIR) spectroscopy. We evaluated this method using two 4-wk experimental trials on a coastal floodplain site near Nowra, New South Wales, Australia, which is managed for silage production. We deployed an automated five-chamber system connected to a portable FTIR spectrometer with multipass cell to measure NO isotopologue fluxes. Emissions of all isotopologues were evident immediately following N addition. All isotopologues responded positively to rainfall events, but only for 7 to 10 d following N addition. Cumulative N-NO fluxes (sum of the three N isotopologues) per chamber for the 14 d following N addition ranged from 1.5 to 10.3 mg N m. Approximately 1% (range 0.7-1.9%) of the total amount of N applied was emitted as NO. Repeatability (1σ) for all isotopologue measurements was better than 0.5 nmol mol for 1-min average concentration measurements, and minimum detectable fluxes for each isotopologue were <0.1 ng N m s. The results indicate that the portable FTIR spectroscopic technique can effectively trace transfer of N to the atmosphere as NO after N addition, allowing powerful quantification of NO emissions under field conditions.

  19. Soil nitrogen transformations under elevated atmospheric CO{sub 2} and O{sub 3} during the soybean growing season

    Energy Technology Data Exchange (ETDEWEB)

    Pujol Pereira, Engil Isadora, E-mail: isapereira@ucdavis.ed [Department of Plant Sciences, University of California - Davis, One Shields Avenue, Davis, CA 95616 (United States); Chung, Haegeun [Division of Environmental Science and Ecological Engineering, Korea University, Anam-dong, Seongbuk-gu, Seoul 136-701 (Korea, Republic of); Scow, Kate [Department of Land, Air, and Water Resources, University of California, Davis, One Shields Avenue, Davis, CA 95616 (United States); Sadowsky, Michael J. [Department of Soil, Water, and Climate and BioTechnology Institute, University of Minnesota, St. Paul, MN 55108 (United States); Kessel, Chris van; Six, Johan [Department of Plant Sciences, University of California - Davis, One Shields Avenue, Davis, CA 95616 (United States)

    2011-02-15

    We investigated the influence of elevated CO{sub 2} and O{sub 3} on soil N cycling within the soybean growing season and across soil environments (i.e., rhizosphere and bulk soil) at the Soybean Free Air Concentration Enrichment (SoyFACE) experiment in Illinois, USA. Elevated O{sub 3} decreased soil mineral N likely through a reduction in plant material input and increased denitrification, which was evidenced by the greater abundance of the denitrifier gene nosZ. Elevated CO{sub 2} did not alter the parameters evaluated and both elevated CO{sub 2} and O{sub 3} showed no interactive effects on nitrifier and denitrifier abundance, nor on total and mineral N concentrations. These results indicate that elevated CO{sub 2} may have limited effects on N transformations in soybean agroecosystems. However, elevated O{sub 3} can lead to a decrease in soil N availability in both bulk and rhizosphere soils, and this likely also affects ecosystem productivity by reducing the mineralization rates of plant-derived residues. - Graphical abstract: Research highlights: Elevated O{sub 3} promotes accumulation of total soil N. Ammonium concentrations under elevated O{sub 3} were lower than those under ambient conditions. Elevated O{sub 3} may increase mineral N losses through the increase of denitrification. Elevated CO{sub 2} did not affect soil mineral N and total N concentrations. - Our findings indicate that although elevated CO{sub 2} increases plant biomass, N transformations were minimally affected. In contrast, elevated O{sub 3} decreased soil mineral N likely through a reduction in plant material input and increased denitrification as indicated by the greater abundance of the denitrifier gene nosZ.

  20. Effect of compaction on microbial activity and carbon and nitrogen transformations in two oxisols with different mineralogy

    Directory of Open Access Journals (Sweden)

    Sérgio Ricardo Silva

    2011-08-01

    Full Text Available The use of machinery in agricultural and forest management activities frequently increases soil compaction, resulting in greater soil density and microporosity, which in turn reduces hydraulic conductivity and O2 and CO2 diffusion rates, among other negative effects. Thus, soil compaction has the potential to affect soil microbial activity and the processes involved in organic matter decomposition and nutrient cycling. This study was carried out under controlled conditions to evaluate the effect of soil compaction on microbial activity and carbon (C and nitrogen (N mineralization. Two Oxisols with different mineralogy were utilized: a clayey oxidic-gibbsitic Typic Acrustox and a clayey kaolinitic Xantic Haplustox (Latossolo Vermelho-Amarelo ácrico - LVA, and Latossolo Amarelo distrófico - LA, respectively, in the Brazil Soil Classification System. Eight treatments (compaction levels were assessed for each soil type in a complete block design, with six repetitions. The experimental unit consisted of PVC rings (height 6 cm, internal diameter 4.55 cm, volume 97.6 cm³. The PVC rings were filled with enough soil mass to reach a final density of 1.05 and 1.10 kg dm-3, respectively, in the LVA and LA. Then the soil samples were wetted (0.20 kg kg-1 = 80 % of field capacity and compacted by a hydraulic press at pressures of 0, 60, 120, 240, 360, 540, 720 and 900 kPa. After soil compression the new bulk density was calculated according to the new volume occupied by the soil. Subsequently each PVC ring was placed within a 1 L plastic pot which was then tightly closed. The soils were incubated under aerobic conditions for 35 days and the basal respiration rate (CO2-C production was estimated in the last two weeks. After the incubation period, the following soil chemical and microbiological properties were detremined: soil microbial biomass C (C MIC, total soil organic C (TOC, total N, and mineral N (NH4+-N and NO3--N. After that, mineral N, organic N

  1. Removal of organics and nutrients from food wastewater using combined thermophilic two-phase anaerobic digestion and shortcut biological nitrogen removal.

    Science.gov (United States)

    Cui, Fenghao; Lee, Seungho; Kim, Moonil

    2011-10-15

    A process combining pilot-scale two-phase anaerobic digestion and shortcut biological nitrogen removal (SBNR) was developed to treat organics and nutrients (nitrogen and phosphorus) from food wastewater. The thermophilic two-phase anaerobic digestion process was investigated without adjusting the pH of the wastewater for the pre-acidification process. The digested food wastewater was treated using the SBNR process without supplemental carbon sources or alkalinity. Under these circumstances, the combined system was able to remove about 99% of COD, 88% of TN, and 97% of TP. However, considerable amounts of nutrients were removed due to chemical precipitation processes between the anaerobic digestion and SBNR. The average TN removal efficiency of the SBNR process was about 74% at very low C/N (TCOD/TN) ratio of 2. The SBNR process removed about 39% of TP from the digested food wastewater. Conclusively, application of the combined system improved organic removal efficiency while producing valuable energy (biogas), removed nitrogen at a low C/N ratio, and conserved additional resources (carbon and alkalinity).

  2. Chemical composition, nitrogen degradability and in vitro ruminal biological activity of tannins in vines harvested from four tropical sweet potato (Ipomoea batatas L.) varieties.

    Science.gov (United States)

    Ali, R; Mlambo, V; Mangwe, M C; Dlamini, B J

    2016-02-01

    This study investigated the potential of vines from four sweet potato varieties (Tia Nong 57, Tia Nong 66, Ligwalagwala and Kenya) as alternative feed resources for ruminant livestock. The chemical composition [neutral detergent fibre (NDF), acid detergent fibre (ADF), crude protein (CP) and acid detergent insoluble nitrogen (ADIN)], in vitro ruminal nitrogen (N) degradability and in vitro ruminal biological activity of tannins in the vines, harvested at 70 and 110 days after planting (DAP), were determined. Variety and harvesting stage did not (p > 0.05) influence CP and NDF content of the vines. Concentration of CP ranged from 104.9 to 212.2 g/kg DM, while NDF ranged from 439.4 to 529.2 g/kg DM across harvesting stages and varieties. Nitrogen degradability (ND) at 70 and 110 DAP was highest (p tannin-binding polyethylene glycol (PEG) increased (p tannins, as measured by increment in gas production parameters upon PEG inclusion, had a maximum value of 18.2%, suggesting low to moderate antinutritional tannin activity. Ligwalagwala vines, with highly degradable N, would be the best protein supplement to use during the dry season when ruminant animals consume low N basal diets and maintenance is an acceptable production objective. Tia Nong 66 and Kenya varieties, with less degradable N, may be more suitable for use as supplements for high-producing animals such as dairy goats.

  3. Preferential flow, nitrogen transformations and 15N balance under urine-affected areas of irrigated and non-irrigated clover-based pastures

    Science.gov (United States)

    Pakro, Naser; Dillon, Peter

    1995-12-01

    Urine-affected areas can lead to considerable losses of N by leaching, ammonia volatilisation and denitrification from dairy pastures in the southeast of South Australia. Potable groundwater supplies are considered to have become contaminated by nitrate as a result of leaching from these leguminous pastures. Dairy cow urine, labelled with 15N urea, was applied to micro-plots and mini-lysimeters installed in two adjacent irrigated (white clover-rye grass) and non-irrigated (subterranean clover-annual grasses) paddocks of a dairy farm on four occasions representing different seasonal conditions. These experiments allowed measurement of nitrogen transformations, recovery of 15N in the pasture and soil, and leaching below various depths. Gaseous losses were calculated from the nitrogen balance. The results of the four experiments showed that within a day of urine application up to 40% of the applied urinary-N was leached below a depth of 150 mm as a result of macropore flow in the irrigated paddock, and up to 24% in the non-irrigated one. After application to the irrigated paddock 17% of the urinary-N moved immediately below 300 mm but only 2% below the 450-mm depth. The urinary-N remaining in the soil was converted from urea to ammonium within a day regardless of season. Within the first 7 days of application six times more nitrate was produced in summer than in winter. This has obvious implications for leaching potential. Leaching of 15N from the top 150 mm of soil, following urine applications in all seasons, was between 41% and 62% of the applied 15N in the irrigated paddock and 25-51% in the non-irrigated paddock. However, leaching losses measured at depths of 300 or 450 mm were smaller by a factor of 2-4. The leaching loss of 15N applied in spring in both paddocks was 41% below 150 mm and 12% below 450 mm. Recovery of 15N from the soil-plant system in the 450-nm deep lysimeters was ˜60% of that applied. Estimated ammonia was ˜9% of applied 15N with no paddock

  4. Buffer nitrogen solubility, in vitro ruminal partitioning of nitrogen and in vitro ruminal biological activity of tannins in leaves of four fodder tree species.

    Science.gov (United States)

    Cudjoe, N; Mlambo, V

    2014-08-01

    This study explores the chemical composition, buffer N solubility, in vitro ruminal N degradability and in vitro ruminal biological activity of tannins in leaves from Gliricidia sepium, Leucaena leucocephala, Morus alba and Trichanthera gigantea trees. These tree leaves are a potential protein source for ruminants, but their site-influenced nutritive value is largely unknown. Leucaena leucocephala leaves had the highest N content (42.1 g/kg DM), while T. gigantea leaves had the least (26.1 g/kg DM). Leucaena leucocephala had the highest buffer solubility index (20%), while 10% of the total N in leaves of the other three species was soluble. The rapidly fermentable N fraction 'a' was highest in M. alba leaves (734.9 g/kg DM) and least in T. gigantea leaves (139.5 g/kg DM). The rate of fermentation (c) was highest for M. alba (7%/hours) leaves. No significant correlations were recorded between buffer solubility index of N and in vitro ruminal N degradability parameters: a, b, and c. The highest response to tannin inactivation using polyethylene glycol, in terms of percentage increase in 36-hours cumulative gas production, was recorded in M. alba (39%) and T. gigantea (38%) leaves. It was concluded that buffer solubility of N is not a good indicator of ruminal N degradation in the leaves of these tree species. Leaves of M. alba could be more valuable as a source of rapidly fermentable N when animals are offered low-protein, high-fibre diets compared with other tree species evaluated in the current study. However, when feeding M. alba leaves, the role of tannins must be considered because these secondary plant compounds showed significant in vitro ruminal biological activity.

  5. Carbon allocation, nodulation, and biological nitrogen fixation of black locust (Robinia pseudoacacia L.) under soil water limitation

    OpenAIRE

    Dario Mantovani; Maik Veste; Katja Boldt-Burisch; Simone Fritsch; Laurie Anne Koning; Dirk Freese

    2015-01-01

    The pioneer tree black locust (Robinia pseudoacacia L.) is a drought-resistant tree and, in symbiosis with Rhizobium, able to fix dinitrogen from the atmosphere. It is, therefore, an interesting species for marginal lands where soil amelioration is sought in addition to economic gain. However, the interaction between soil water availability, carbon allocation and nitrogen fixation is important for a successful establishment of trees on marginal lands and has not yet been investigated for blac...

  6. Aromatic plants play an important role in promoting soil biological activity related to nitrogen cycling in an orchard ecosystem.

    Science.gov (United States)

    Chen, Xinxin; Song, Beizhou; Yao, Yuncong; Wu, Hongying; Hu, Jinghui; Zhao, Lingling

    2014-02-15

    Aromatic plants can substantially improve the diversity and structure of arthropod communities, as well as reduce the number of herbivore pests and regulate the abundance of predators and parasitoids. However, it is not clear whether aromatic plants are also effective in improving soil quality by enhancing nutrient cycling. Here, field experiments are described involving intercropping with aromatic plants to investigate their effect on soil nitrogen (N) cycling in an orchard ecosystem. The results indicate that the soil organic nitrogen and available nitrogen contents increased significantly in soils intercropped with aromatic plants. Similarly, the activities of soil protease and urease increased, together with total microbial biomass involved in N cycling, including nitrifying bacteria, denitrifying bacteria and azotobacters, as well as the total numbers of bacteria and fungi. This suggests that aromatic plants improve soil N cycling and nutrient levels by enriching the soil in organic matter through the regulation of both the abundance and community structure of microorganisms, together with associated soil enzyme activity, in orchard ecosystems.

  7. First signal from a broadband cryogenic preamplifier cooled by circulating liquid nitrogen in a 7 T Fourier transform ion cyclotron resonance mass spectrometer.

    Science.gov (United States)

    Choi, Myoung Choul; Lee, Jeong Min; Lee, Se Gyu; Choi, Sang Hwan; Choi, Yeon Suk; Lee, Kyung Jae; Kim, SeungYong; Kim, Hyun Sik; Stahl, Stefan

    2012-12-18

    Despite the outstanding performance of Fourier transform ion cyclotron/mass spectrometry (FTICR/MS), the complexity of the cellular proteome or natural compounds presents considerable challenges. Sensitivity is a key performance parameter of a FTICR mass spectrometer. By improving this parameter, the dynamic range of the instrument can be increased to improve the detection signal of low-abundance compounds or fragment ion peaks. In order to improve sensitivity, a cryogenic detection system was developed by the KBSI (Korean Basic Science Institute) in collaboration with Stahl-Electronics (Mettenheim, Germany). A simple, efficient liquid circulation cooling system was designed and a cryogenic preamplifier implemented inside a FTICR mass spectrometer. This cooling system circulates a cryoliquid from a Dewar to the "liquid circulation unit" through a CF flange to cool a copper block and a cryopreamplifier; the cooling medium is subsequently exhausted into the air. The cryopreamplifier can be operated over a very wide temperature range, from room temperature to low temperature environments (4.2 K). First, ion signals detected by the cryopreamplifier using a circulating liquid nitrogen cooling system were observed and showed a signal-to-noise ratio (S/N) about 130% better than that obtained at room temperature.

  8. Biologic

    CERN Document Server

    Kauffman, L H

    2002-01-01

    In this paper we explore the boundary between biology and the study of formal systems (logic). In the end, we arrive at a summary formalism, a chapter in "boundary mathematics" where there are not only containers but also extainers ><, entities open to interaction and distinguishing the space that they are not. The boundary algebra of containers and extainers is to biologic what boolean algebra is to classical logic. We show how this formalism encompasses significant parts of the logic of DNA replication, the Dirac formalism for quantum mechanics, formalisms for protein folding and the basic structure of the Temperley Lieb algebra at the foundations of topological invariants of knots and links.

  9. Impact of salinity on organic matter and nitrogen removal from a municipal wastewater RO concentrate using biologically activated carbon coupled with UV/H2O2.

    Science.gov (United States)

    Pradhan, Shovana; Fan, Linhua; Roddick, Felicity A; Shahsavari, Esmaeil; Ball, Andrew S

    2016-05-01

    The concentrate streams generated from reverse osmosis (RO)-based municipal wastewater reclamation processes contain organic substances and nutrients at elevated concentrations, posing environmental and health risks on their disposal to confined receiving environments such as bays. The impact of salinity (TDS at 7, 10 and 16 g/L) of a RO concentrate (ROC) on the treatment efficiency of a biological activated carbon (BAC) system after pre-oxidation with UV/H2O2 was characterised in terms of removal of organic matter and nitrogen species, and the bacterial communities. Organic matter removal was comparable for the ROC over the tested salinity range, with 45-49% of DOC and 70-74% of UVA254 removed by the combined treatment. However, removal in total nitrogen (TN) was considerably higher for the ROC at the high salinity (TDS ∼ 16 mg/L) compared with the low (∼7 g/L) and medium salinity (∼10 g/L). Effective nitrification with high ammonium removal (>90%) was achieved at all salinity levels, whereas greater denitrification (39%) was obtained at high salinity than low (23%) and medium salinity (27%) which might suggest that the bacterial communities contributing to the greater denitrification were more halotolerant. Microbiological characterisation using polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) and culture based techniques showed that diversified bacterial communities were present in the BAC system as evident from different 16S rDNA. The major bacterial groups residing on the BAC media belonged to Bacillus (Firmicutes), Pseudomonas (γ-Proteobacteria), and Rhodococcus (Actinobacteria) for all salinity levels, confirming that these microbial communities could be responsible for carbon and nitrogen removal at the different salinity levels. This has implications in understanding the effectiveness and robustness of the BAC system over the salinity range of the ROC and so would be useful for optimising the treatment efficiency of

  10. Enhanced biological nutrient removal by the alliance of a heterotrophic nitrifying strain with a nitrogen removing ecosystem

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Nitrogen removal from synthetic wastewater was investigated in an airlift bioreactor (ALB), augmented with a novel heterotrophic nitrifier Pseudonocardia ammonioxydans H9T under organic carbon to nitrogen ratios (Corg/N) ranging from 0 to 12. Effect of the inoculated strain was also determined on the settling properties and the removal of chemical oxygen demand (COD). Two laboratory scale reactors were set up to achieve a stable nitrifying state under the same physicochemical conditions of hydraulic retention time (HRT), temperature, pH and dissolved oxygen (DO), and operated under the sequencing batch mode. The level of DO was kept at 0.5-1.5 mg/L by periodic stirring and aeration. Each specific Corg/N ratio was continued for duration of 3 weeks. One of the reactors (BR2) was inoculated with P. ammonioxydans H9T periodically at the start of each Corg/N ratio. Sludge volumetric index (SVI) improved with the increasing Corg/N ratio, but no significant difference was detected between the two reactors. BR2 showed higher levels of nitrogen removal with the increasing heterotrophic conditions, and the ammonia removal reached to the level of 82%-88%, up to10% higher than that in the control reactor (BR1) at Corg/N ratios higher than 6; however, the ammonia removal level in experimental reactor was up to 8% lower than that in control reactor at Corg/N ratios lower than 2. The COD removal efficiency progressively increased with the increasing Corg/N ratios in both of the reactors. The COD removal percentage up to peak values of 88%-94% in BR2, up to 11% higher than that in BR1 at Corg/N ratio higher than 4. The peak values of ammonia and COD removal almost coincided with the highest number (18%-27% to total bacterial number) of the exogenous bacterium in the BR2, detected as colony forming units (CFU). Furthermore, the removal of ammonia and COD in BR2 was closely related to the number of the inoculated strain with a coefficient index (R2) up to 0.82 and 0.85 for ammonia

  11. Intercross real-time control strategy in alternating activated sludge process for short-cut biological nitrogen removal treating domestic wastewater

    Institute of Scientific and Technical Information of China (English)

    WANG Shuying; ZHANG Shanfeng; PENG chengyao; AKIOTAKIGAWA

    2008-01-01

    To develop technically feasible and economically favorable dynamic process control (DPC) strategies for an alternating activated sludge (AAS) system, a bench-scale continuous-flow alternating aerobic and anoxic reactor, performing short-cut nitrogen removal from real domestic wastewater was operated under different control strategies for more than five months. A fixed-time control (FTC) study showed that bending-points on pH and oxidation reduction potential (ORP) profiles accurately coincided with the major biological activities. "Ammonia valley" on the pH profile represented the end of nitrification, whereas, the "nitrite knee" on the ORP profile and "nitrite apex" on the pH profile both indicated the end of denitrification. Therefore, a new reliable and effective real-time control strategy was developed using pH and ORP as control parameters, to improve the performance of the AAS process. The online control strategy could achieve up to 87% of the total nitrogen [G1](TN) removal efficiency on an average, and saving approximately 20% aeration energy, as compared to the conventional steady-state control systems. Moreover, stable short-cut nitrification and denitrification were successfully achieved with an average nitrite accumulation ratio of above 95%.

  12. Synthesis and study on biological activity of nitrogen-containing heterocyclic compounds – regulators of enzymes of nucleic acid biosynthesis

    Directory of Open Access Journals (Sweden)

    Alexeeva I. V.

    2013-07-01

    Full Text Available Results of investigations on the development of new regulators of functional activity of nucleic acid biosynthesis enzymes based on polycyclic nitrogen-containing heterosystems are summarized. Computer design and molecular docking in the catalytic site of target enzyme (T7pol allowed to perform the directed optimization of basic structures. Several series of compounds were obtained and efficient inhibitors of herpes family (simple herpes virus type 2, Epstein-Barr virus, influenza A and hepatitis C viruses were identified, as well as compounds with potent antitumor, antibacterial and antifungal activity. It was established that the use of model test systems based on enzymes participating in nucleic acids synthesis is a promising approach to the primary screening of potential inhibitors in vitro.

  13. Automatic flow injection based methodologies for determination of scavenging capacity against biologically relevant reactive species of oxygen and nitrogen.

    Science.gov (United States)

    Magalhães, Luís M; Lúcio, Marlene; Segundo, Marcela A; Reis, Salette; Lima, José L F C

    2009-06-15

    Redox reactions are the heart of numerous biochemical pathways found in cellular chemistry, generating reactive oxygen species (ROS) and reactive nitrogen species (RNS), that includes superoxide anion radical (O2-), hydrogen peroxide (H2O2), hydroxyl radical (HO), singlet oxygen ((1)O2), hypochlorite anion (OCl-), peroxynitrite anion (ONOO-) and nitric oxide radical (NO). The measurement of scavenging capacity against these reactive species presents new challenges, which can be met by flow injection analysis (FIA). In the present review several methods based on FIA and also on its predecessors computer-controlled techniques (sequential injection analysis, multisyringe flow injection analysis, multicommutated and multipumping flow systems) are critically discussed. The selectivity and applicability of the methodology, the generation and detection of the target reactive species, the benefits and limitations of automation when compared to batch methods are some of the issues addressed.

  14. Effect of Microgravity on Early Events of Biological Nitrogen Fixation in Medicago Truncatula: Initial Results from the SyNRGE Experiment

    Science.gov (United States)

    Stutte, Gary W.; Roberts, Michael S.

    2011-01-01

    SyNRGE (Symbiotic Nodulation in a Reduced Gravity Environment) was a sortie mission on STS-135 in the Biological Research in Canisters (BRIC) hardware to study the effect of microgravity on a plant-microbe symbiosis resulting in biological nitrogen fixation. Medicago truncatula, a model species of the legume family, was inoculated with its bacterial symbiont, Sinorhizobium meliloti, to observe early events associated with infection and nodulation in Petri Dish Fixation Units (PDFUs). Two sets of experiments were conducted in orbit and in 24-hour delayed ground controls. Experiment one was designed to determine if S. meliloti infect M. truncatula and initiate physiological changes associated with nodule formation. Roots of five-day-old M. truncatula cultivar Jemalong A17 (Enodll::gus) were inoculated 24 hr before launch with either S. meliloti strain 1021 or strain ABS7 and integrated into BRIC-PDFU hardware placed in a 4 C Cold Bag for launch on Atlantis. Inoculated plants and uninoculated controls were maintained in the dark at ambient temperature in the middeck of STS-135 for 11 days before fixation in RNAlater(tM) by crew activation of the PDFU. Experiment two was designed to determine if microgravity altered the process of bacterial infection and host plant nodule formation. Seeds of two M. truncatula cultivar Jemalong A17 lines, the Enodll::gus used in experiment 1, and SUNN, a super-nodulating mutant of A17, were germinated on orbit for 11 days in the middeck cabin and returned to Earth alive inside of BRIC-PDFU's at 4 C. S. meliloti strains 1021 and ABS7 were cultivated separately in broth culture on orbit and also returned to Earth alive. After landing, flight- and groundgrown plants and bacteria were transferred from BRIC-PDFU's into Nunc(tm) 4-well plates for reciprocity crosses. Rates of plant growth and nodule development on Buffered Nodulation Medium (lacking nitrogen) were measured for 14 days. Preliminary analysis' of Experiment 1 confirms that

  15. A mechanistic modelling and data assimilation approach to estimate the carbon/chlorophyll and carbon/nitrogen ratios in a coupled hydrodynamical-biological model

    Directory of Open Access Journals (Sweden)

    B. Faugeras

    2004-01-01

    Full Text Available The principal objective of hydrodynamical-biological models is to provide estimates of the main carbon fluxes such as total and export oceanic production. These models are nitrogen based, that is to say that the variables are expressed in terms of their nitrogen content. Moreover models are calibrated using chlorophyll data sets. Therefore carbon to chlorophyll (C:Chl and carbon to nitrogen (C:N ratios have to be assumed. This paper addresses the problem of the representation of these ratios. In a 1D framework at the DYFAMED station (NW Mediterranean Sea we propose a model which enables the estimation of the basic biogeochemical fluxes and in which the spatio-temporal variability of the C:Chl and C:N ratios is fully represented in a mechanical way. This is achieved through the introduction of new state variables coming from the embedding of a phytoplankton growth model in a more classical Redfieldian NNPZD-DOM model (in which the C:N ratio is assumed to be a constant. Following this modelling step, the parameters of the model are estimated using the adjoint data assimilation method which enables the assimilation of chlorophyll and nitrate data sets collected at DYFAMED in 1997.Comparing the predictions of the new Mechanistic model with those of the classical Redfieldian NNPZD-DOM model which was calibrated with the same data sets, we find that both models reproduce the reference data in a comparable manner. Both fluxes and stocks can be equally well predicted by either model. However if the models are coinciding on an average basis, they are diverging from a variability prediction point of view. In the Mechanistic model biology adapts much faster to its environment giving rise to higher short term variations. Moreover the seasonal variability in total production differs from the Redfieldian NNPZD-DOM model to the Mechanistic model. In summer the Mechanistic model predicts higher production values in carbon unit than the Redfieldian NNPZD

  16. Impacts of off-road vehicles on nitrogen cycles in biological soil crusts: Resistance in different U.S. deserts

    Science.gov (United States)

    Belnap, J.

    2002-01-01

    Biological soil crusts are an important component of desert ecosystems, as they influence soil stability and fertility. This study examined and compared the short-term vehicular impacts on lichen cover and nitrogenase activity (NA) of biological soil crusts. Experimental disturbance was applied to different types of soil in regions throughout the western U.S. (Great Basin, Colorado Plateau, Sonoran, Chihuahuan, and Mojave deserts). Results show that pre-disturbance cover of soil lichens is significantly correlated with the silt content of soils, and negatively correlated with sand and clay. While disturbance appeared to reduce NA at all sites, differences were statistically significant at only 12 of the 26 sites. Cool desert sites showed a greater decline than hot desert sites, which may indicate non-heterocystic cyanobacterial species are more susceptible to disturbance than non-heterocystic species. Sandy soils showed greater reduction of NA as sand content increased, while fine-textured soils showed a greater decline as sand content increased. At all sites, higher NA before the disturbance resulted in less impact to NA post-disturbance. These results may be useful in predicting the impacts of off-road vehicles in different regions and different soils. ?? 2002 Published by Elsevier Science Ltd.

  17. Synthetic biology and therapeutic strategies for the degenerating brain: Synthetic biology approaches can transform classical cell and gene therapies, to provide new cures for neurodegenerative diseases.

    Science.gov (United States)

    Agustín-Pavón, Carmen; Isalan, Mark

    2014-10-01

    Synthetic biology is an emerging engineering discipline that attempts to design and rewire biological components, so as to achieve new functions in a robust and predictable manner. The new tools and strategies provided by synthetic biology have the potential to improve therapeutics for neurodegenerative diseases. In particular, synthetic biology will help design small molecules, proteins, gene networks, and vectors to target disease-related genes. Ultimately, new intelligent delivery systems will provide targeted and sustained therapeutic benefits. New treatments will arise from combining 'protect and repair' strategies: the use of drug treatments, the promotion of neurotrophic factor synthesis, and gene targeting. Going beyond RNAi and artificial transcription factors, site-specific genome modification is likely to play an increasing role, especially with newly available gene editing tools such as CRISPR/Cas9 systems. Taken together, these advances will help develop safe and long-term therapies for many brain diseases in human patients.

  18. Discovery of Evolutionary Divergence of Biological Nitrogen Fixation and Photosynthesis: Fine Tuning of Biogenesis of the NifH and the ChlL by a Peptidyl-Prolyl Cis/Trans Isomerase

    OpenAIRE

    Nara Gavini; Sinny Delacroix; Kelvin Harris Jr.; Lakshmi Pulakat

    2011-01-01

    Problem statement: Despite the structural and functional similarities between the nitrogenase that performs biological nitrogen fixation reaction and the Dark Protochlorphyllide Oxidoreductase (DPOR) that performs chlorophyll-biosynthesis, attempts to substitute nitrogenase-components with DPOR-components have hitherto failed. This investigation was undertaken to test if Chlamydomonas reinhardtii protochlorophyllide (Pchlide) reductase (ChlL) that shares some structural similarity with Nitrog...

  19. Gross Nitrogen Mineralization in Surface Sediments of the Yangtze Estuary

    OpenAIRE

    Xianbiao Lin; Lijun Hou; Min Liu; Xiaofei Li; Guoyu Yin; Yanling Zheng; Fengyu Deng

    2016-01-01

    Nitrogen mineralization is a key biogeochemical process transforming organic nitrogen to inorganic nitrogen in estuarine and coastal sediments. Although sedimentary nitrogen mineralization is an important internal driver for aquatic eutrophication, few studies have investigated sedimentary nitrogen mineralization in these environments. Sediment-slurry incubation experiments combined with 15N isotope dilution technique were conducted to quantify the potential rates of nitrogen mineralization i...

  20. 模拟排水沟渠非点源溶质氮迁移实验研究%Transformation of Non-point Source Soluble Nitrogen in Simulated Drainage Ditch

    Institute of Scientific and Technical Information of China (English)

    李强坤; 宋常吉; 胡亚伟; 彭聪; 马强; 姜正曦; 琚艺萌

    2016-01-01

    The drainage ditch has a compound ecosystem structure consisting of water, sediment and plants. Migration and transformation of the non-point source solute is important to study interception, control and management of agricultural non-point source pollution in the drainage ditch. Based on the experiment on static simulation of drainage ditches, the article used typical non-point source soluble nitrogen as an example to analyze the changing process of nitrogen content in water, sediment and reeds, and to study the effects of the sediment adsorption and desorption, reeds growth and death in different periods on nitrogen concentration in water. The article discussed nitrogen migration in water-sediment- reeds compound ecosystem and its influence on nitrogen concentration in water. The results showed that both adsorption and desorption in sediment and absorption and assimilation of reeds growth had effect on nitrogen concentration in water. The effect before October was reducing the nitrogen concentration in water, which was the process of nitrogen purification in water. After October, the nitrogen concentration in water increased and made it easy to form secondary nitrogen pollution. Meanwhile, the migration in the water-sediment-seeds ecosystem in simulated drainage ditch had close ties, any migration and transformation of nitrogen in a single medium or between different mediums would cause adjustment of nitrogen concentration in water.%农田排水沟渠是由水-底泥-植物组成的复合生态结构,其间非点源溶质的迁移转化对研究沟渠拦截、控制和管理农业非点源污染具有重要意义。本研究以模拟排水沟渠静态实验为基础,以典型非点源溶质氮素为例,分析了实验期内水体、底泥及芦苇不同介质内氮含量变化过程,分析了底泥吸附与解析、芦苇生长与衰败等年内不同时期对水体中氮素浓度的影响,探讨了水-底泥-芦苇复合生态体内氮迁移及对水体中氮

  1. State of the art of methods for the elimination of nitrogen in small and medium-sized agricultural biogas installations - Final report; Etat de l'art des methodes (rentables) pour l'elimination, la concentration ou la transformation de l'azote pour les installations de biogaz agricoles de taille petite/moyenne - Rapport final

    Energy Technology Data Exchange (ETDEWEB)

    Bakx, T.; Membrez, Y.; Mottet, A. [Erep SA, Aclens (Switzerland); Joss, A.; Boehler, M. [EAWAG, Duebendorf (Switzerland)

    2009-09-15

    This final report for the Swiss Federal Office of Energy (SFOE) reports on research work done on the elimination, concentration or transformation of nitrogen in small and medium-sized agricultural biogas installations. The goal of the project - the conception of a state of the art on existing, economically feasible technologies or processes to treat the nitrogen produced in anaerobic digestion - is discussed. Typical Swiss small/medium size agricultural biogas plants with an electrical power of around 100 kW from its combined heat and power generation (CHP) unit are examined. A reference installation is discussed which treats cow slurry, organic restaurant waste, used vegetable oils, bakery wastes, coffee grounds, and cereal wastes. A literature research is described which was conducted to find information regarding available treatment techniques for slurry and digestate treatment. Information from Switzerland, France, Belgium, the Netherlands, Germany and Austria was used. Various techniques are examined including a screw-press separator, a centrifuge, membrane filtration, air stripping with acid wash, air stripping with catalytic combustion, evaporation, band dryer, precipitation, composting and biological treatment. The economic analysis and the comparison between techniques are quoted as being coarse as they are based on numerous assumptions.

  2. Abundance of microbes involved in nitrogen transformation in the rhizosphere of Leucanthemopsis alpina (L.) Heywood grown in soils from different sites of the Damma glacier forefield.

    Science.gov (United States)

    Töwe, Stefanie; Albert, Andreas; Kleineidam, Kristina; Brankatschk, Robert; Dümig, Alexander; Welzl, Gerhard; Munch, Jean Charles; Zeyer, Josef; Schloter, Michael

    2010-11-01

    Glacier forefields are an ideal playground to investigate the role of development stages of soils on the formation of plant-microbe interactions as within the last decades, many alpine glaciers retreated, whereby releasing and exposing parent material for soil development. Especially the status of macronutrients like nitrogen differs between soils of different development stages in these environments and may influence plant growth significantly. Thus, in this study, we reconstructed major parts of the nitrogen cycle in the rhizosphere soil/root system of Leucanthemopsis alpina (L.) HEYWOOD: as well as the corresponding bulk soil by quantifying functional genes of nitrogen fixation (nifH), nitrogen mineralisation (chiA, aprA), nitrification (amoA AOB, amoA AOA) and denitrification (nirS, nirK and nosZ) in a 10-year and a 120-year ice-free soil of the Damma glacier forefield. We linked the results to the ammonium and nitrate concentrations of the soils as well as to the nitrogen and carbon status of the plants. The experiment was performed in a greenhouse simulating the climatic conditions of the glacier forefield. Samples were taken after 7 and 13 weeks of plant growth. Highest nifH gene abundance in connection with lowest nitrogen content of L. alpina was observed in the 10-year soil after 7 weeks of plant growth, demonstrating the important role of associative nitrogen fixation for plant development in this soil. In contrast, in the 120-year soil copy numbers of genes involved in denitrification, mainly nosZ were increased after 13 weeks of plant growth, indicating an overall increased microbial activity status as well as higher concentrations of nitrate in this soil.

  3. Effects of carbon concentrations and carbon to nitrogen ratios on sporulation of two biological control fungi as determined by different culture methods.

    Science.gov (United States)

    Gao, Li; Liu, Xingzhong

    2010-06-01

    The nematophagous fungus Pochonia chlamydosporia (Clavicipitaceae) and entomopathogenic fungus Beauveria bassiana (Cordycipitaceae) have great potential for biological control. However, a significant barrier to their commercial development as mycopesticides is the high costs associated with production. Carbon (C) concentration and C to nitrogen ratio (C:N ratio) greatly affect fungal growth and sporulation. Effects of C concentration and C:N ratio differed when the fungi were cultivated using two different methods: the conventional (continuous cultivation) method and a novel "two-stage" method. Sporulation of P. chlamydosporia (HSY-12-14) was the highest when the media contained 6 g l(-1) C and a C:N ratio of 40:1 or 8 g l(-1) C and C:N ratios of 20:1 or 40:1 for the conventional method but 8 g l(-1) C and a C:N ratio of only 10:1 with the novel "two-stage" method. Sporulation of B. bassiana (IBC1201) was the highest when the media contained 12 g l(-1) C and a C:N ratio of 40:1 with the conventional method but only 4 g l(-1) C and a C:N ratio of 5:1 with the novel "two-stage" method. In addition, the nutritional requirements as determined by the conventional method differed for mycelial growth and sporulation. Understanding the effects of nutrition on sporulation can help programs seeking to use these organisms as biological control agents and is essential for their mass production and commercialization.

  4. Using 15N isotopic dilution method to quantify the biological nitrogen fixation in sugarcane%15N同位素稀释法评估甘蔗的生物固氮量

    Institute of Scientific and Technical Information of China (English)

    周晓舟; 李杨瑞; 杨丽涛

    2012-01-01

    The quantification of biological nitrogen fixation in sugarcane was investigated with 15N isotope dilution technique in greenhouse bucket culture test,using cassava as reference plant. The experimental results showed that Ndfa accounted for 11. 3514%,and the nitrogen fixation rate was 0. 9269 g/bucket for whole growth duration of sugarcane. Ndfa and the nitrogen fixation amount in different organs of the plant showed leaf>stalk>root. Ndfa in leaf accounted for 13. 2668%,a little higher than that in the whole plant,but the difference was not significant. The percentage of nitrogen from air,fertilizer and soil occupying the total nitrogen of the plant was 11. 3514% ,7. 6857% and 80. 9629%, respectively. The nitrogen use efficiency of sugarcane was 58. 7583%. It was concluded that all organs of sugarcane could fix nitrogen through biological nitrogen fixation,and leaves could be used to estimate the amount of biological nitrogen fixation in place of whole plant of sugarcane.%为评估甘蔗生物固氮量,采用15N同位素稀释法,以木薯为参比植物,进行温室桶栽试验.结果表明:甘蔗全生育期植株固氮11.3514% Ndfa,固氮量每桶0.9269 g.甘蔗根、茎、叶的固氮百分率和固氮量大小依序为叶>茎>根.叶的固氮百分率(13.2668% Ndfa)略高于植株,但两者差异不显著.甘蔗植株全氮量中来自空气氮(生物固氮)、肥料氮和土壤氮的比例分别为11.3514%、7.6857%、80.9629%.甘蔗的氮肥利用率为58.7583%.甘蔗根、茎、叶各部位均有固氮现象,生产上可以用叶代替植株来评估甘蔗的生物固氮量.

  5. Response of nitrogen, phosphorus and zinc efficiency of fenugreek (Trigonella foenum- graecum to combination of chemical and biological fertilizers in greenhouse culture

    Directory of Open Access Journals (Sweden)

    2015-06-01

    Full Text Available In order to investigate the effect of combination of chemical and biological fertilizers on dry matter, uptake and efficiency of nitrogen (N, phosphorus (P and zinc (Zn by fenugreek (Trigonella foenum- graecum, an experiment was conducted as randomized complete blocks design with three replications in the Research Greenhouse of Shahrekord University. Eight fertilizer treatments consisted of control (no fertilizer, urea fertilizer (UF, UF+ zinc sulfate (ZS, UF+ Azotobacter (Az, UF+ mycorrhiza (My, UF+ ZS+ Az, UF+ ZS+ My and UF+ ZS+ Az+ My. Results indicated that there was significant difference (P≤ 0.05 among different fertilizer treatments for agronomic efficiency of N, P and Zn. The highest agronomic efficiency of N, P and Zn (60, 96 and 198 g/g, respectively was achieved in UF+ZS+Az treatment. The highest P-uptake efficiency (18.7 % was observed in UF+My treatment and it had significant (P≤ 0.05 difference with other treatments, except UF+ZS treatment. The highest Zn physiologic efficiency was obtained in UF+ZS, which had no significant difference with UF+ ZS+ Az and UF+ ZS+ Az+ My. Maximum dry matter (292 g/m2 was produced in UF+ ZS+ Az treatment. In general, application of biofertilizers, especially Azotobacter, integrated with urea and zinc sulfate not only is effective in increasing dry matter, but also can increase productivity of fenugreek by increasing chemical fertilizers’ efficiency in greenhouse culture.

  6. [Synthetic study of biologically important nitrogen containing natural products: development of new methodology and design of leading compounds for new pharmaceuticals].

    Science.gov (United States)

    Nakagawa, Masako

    2003-04-01

    Synthetic study of biologically important nitrogen-containing natural products and development of new methodologies and design of leading compounds for new pharmaceuticals are described. The first total synthesis of eudistomines, manzamine C, martefragin A, cerebroside B1b, and symbioramide was accomplished and the absolute configurations of the stereogenic centers were determined. A novel methodology useful for the synthesis of alkaloids that have perhydroisoquinoline ring system such as manzamine A and B, and related alkaloids, nakadomarin A and dynemicin A, is presented. Sphingolipids, 4-stereoisomers of 1-phenyl-2-palmitoylamino-3-morpholino-1-propanol, were synthesized and antimalaria activity was investigated. Inhibition of DNA primase by sphingosine and its analogues is described. A new synthetic methodology for alkylation and reduction of imines has been developed, and the first example of a reagent-controlled enantioselective Pictet-Spengler reaction is described. Also novel and convenient methods using transition metal and rare earth metals including alkene metathesis, asymmetric Diels-Alder reaction, imino ene reaction, selective allylic halogenation, enantioselective Pictet-Spengler reaction, and enantioselective physostigmine synthesis are described.

  7. Agrobacterium-mediated transformation of the haploid liverwort Marchantia polymorpha L., an emerging model for plant biology.

    Science.gov (United States)

    Ishizaki, Kimitsune; Chiyoda, Shota; Yamato, Katsuyuki T; Kohchi, Takayuki

    2008-07-01

    Agrobacterium-mediated transformation has not been practical in pteridophytes, bryophytes and algae to date, although it is commonly used in model plants including Arabidopsis and rice. Here we present a rapid Agrobacterium-mediated transformation system for the haploid liverwort Marchantia polymorpha L. using immature thalli developed from spores. Hundreds of hygromycin-resistant plants per sporangium were obtained by co-cultivation of immature thalli with Agrobacterium carrying the binary vector that contains a reporter, the beta-glucuronidase (GUS) gene with an intron, and a selection marker, the hygromycin phosphotransferase (hpt) gene. In this system, individual gemmae, which arise asexually from single initial cells, were analyzed as isogenic transformants. GUS activity staining showed that all hygromycin-resistant plants examined expressed the GUS transgene in planta. DNA analyses verified random integration of 1-5 copies of the intact T-DNA between the right and the left borders into the M. polymorpha genome. The efficient and rapid Agrobacterium-mediated transformation of M. polymorpha should provide molecular techniques to facilitate comparative genomics, taking advantage of this unique model plant that retains many features of the common ancestor of land plants.

  8. Phylogenetic and metabolic diversity of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX)-transforming bacteria in strictly anaerobic mixed cultures enriched on RDX as nitrogen source.

    Science.gov (United States)

    Zhao, Jian-Shen; Spain, Jim; Hawari, Jalal

    2003-11-01

    Five obligate anaerobes that were most closely related to Clostridium bifermentans, Clostridium celerecrescens, Clostridium saccharolyticum, Clostridium butyricum and Desulfovibrio desulfuricans by their 16S rRNA genes sequences were isolated from enrichment cultures using hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) as a nitrogen source. The above isolates transformed RDX at rates of 24.0, 5.4, 6.2, 2.5, 5.5 mumol h(-1) g (dry weight) of cells(-1), respectively, to nitrite, formaldehyde, methanol, and nitrous oxide. The present results indicate that clostridia are major strains responsible for RDX removal, and all isolates seemed to mainly transform RDX via its initial reduction to MNX and subsequent denitration. Since clostridia are commonly present in soil, we suggest that they may contribute to the removal of RDX in the subsurface (anoxic) soil.

  9. Nitrogen Backbone Oligomers.

    Science.gov (United States)

    Wang, Hongbo; Eremets, Mikhail I; Troyan, Ivan; Liu, Hanyu; Ma, Yanming; Vereecken, Luc

    2015-08-19

    We found that nitrogen and hydrogen directly react at room temperature and pressures of ~35 GPa forming chains of single-bonded nitrogen atom with the rest of the bonds terminated with hydrogen atoms - as identified by IR absorption, Raman, X-ray diffraction experiments and theoretical calculations. At releasing pressures below ~10 GPa, the product transforms into hydrazine. Our findings might open a way for the practical synthesis of these extremely high energetic materials as the formation of nitrogen-hydrogen compounds is favorable already at pressures above 2 GPa according to the calculations.

  10. Perspectives of a systems biology of the synapse: how to transform an indefinite data space into a model?

    Science.gov (United States)

    Mewes, H W; Wachinger, B; Stümpflen, V

    2010-05-01

    Understanding the synapse and its role in the development of psychiatric disorders is not only a demanding but a highly relevant challenge for neuroscience. With the advancement of modern high-throughput technologies, the amount of data collected becomes incomprehensible and the volume of information intractable for the individual scientist. Why Systems Biology opens alternatives to organize information and to deduce knowledge that can be scrutinized by rationally designed experiments? We discuss some of the fundamental ideas why Systems Biology is indeed an alternative to reductionism and show an example how semantics may help to exploit the rich source of the scientific literature to generate qualitative models of functional modules.

  11. The structure of the fire fighting foam surfactant Forafac®1157 and its biological and photolytic transformation products.

    Science.gov (United States)

    Moe, Morten K; Huber, Sandra; Svenson, Johan; Hagenaars, An; Pabon, Martial; Trümper, Monika; Berger, Urs; Knapen, Dries; Herzke, Dorte

    2012-10-01

    For several decades, perfluorooctane sulfonate (PFOS) has widely been used as a fluorinated surfactant in aqueous film forming foams used as hydrocarbon fuel fire extinguishers. Due to concerns regarding its environmental persistence and toxicological effects, PFOS has recently been replaced by novel fluorinated surfactants such as Forafac®1157, developed by the DuPont company. The major component of Forafac®1157 is a 6:2 fluorotelomer sulfonamide alkylbetaine (6:2 FTAB), and a link between the trade name and the exact chemical structure is presented here to the scientific community for the first time. In the present work, the structure of the 6:2 FTAB was elucidated by (1)H, (13)C and (19)F nuclear magnetic resonance spectroscopy and high-resolution mass spectrometry. Moreover, its major metabolites from blue mussel (Mytilus edulis) and turbot (Scophthalmus maximus) and its photolytic transformation products were identified. Contrary to what has earlier been observed for PFOS, the 6:2 FTAB was extensively metabolized by blue mussel and turbot exposed to Forafac®1157. The major metabolite was a deacetylated betaine species, from which mono- and di-demethylated metabolites also were formed. Another abundant metabolite was the 6:2 fluorotelomer sulfonamide. In another experiment, Forafac®1157 was subjected to UV-light induced photolysis. The experimental conditions aimed to simulate Arctic conditions and the deacetylated species was again the primary transformation product of 6:2 FTAB. A 6:2 fluorotelomer sulfonamide was also formed along with a non-identified transformation product. The environmental presence of most of the metabolites and transformation products was qualitatively demonstrated by analysis of soil samples taken in close proximity to an airport fire training facility.

  12. STRUCTURE AND REDOX TRANSFORMATIONS OF IRON(III COMPLEXES WITH SOME BIOLOGICALLY IMPORTANT INDOLE-3-ALKANOIC ACIDS IN AQUEOUS SOLUTIONS

    Directory of Open Access Journals (Sweden)

    Krisztina Kovács

    2007-06-01

    Full Text Available Interactions of a series of indole-3-alkanoic acids (with n-alkanoic acid side-chains from C1 to C4 with iron(III in acidic aqueous solutions have been shown to comprise two parallel processes including complexation and redox transformations giving iron(II hexaaquo complexes. The structure and composition of the reaction products are discussed, as analysed using a combination of instrumental techniques including 57Fe Mössbauer, vibrational and HNMR spectroscopies.

  13. Pathway of FeEDTA transformation and its impact on performance of NOx removal in a chemical absorption-biological reduction integrated process.

    Science.gov (United States)

    Li, Wei; Zhao, Jingkai; Zhang, Lei; Xia, Yinfeng; Liu, Nan; Li, Sujing; Zhang, Shihan

    2016-01-01

    A novel chemical absorption-biological reduction (CABR) integrated process, employing ferrous ethylenediaminetetraacetate (Fe(II)EDTA) as a solvent, is deemed as a potential option for NOx removal from the flue gas. Previous work showed that the Fe(II)EDTA concentration was critical for the NOx removal in the CABR process. In this work, the pathway of FeEDTA (Fe(III)/Fe(II)-EDTA) transformation was investigated to assess its impact on the NOx removal in a biofilter. Experimental results revealed that the FeEDTA transformation involved iron precipitation and EDTA degradation. X-ray photoelectron spectroscopy analysis confirmed the iron was precipitated in the form of Fe(OH)3. The iron mass balance analysis showed 44.2% of the added iron was precipitated. The EDTA degradation facilitated the iron precipitation. Besides chemical oxidation, EDTA biodegradation occurred in the biofilter. The addition of extra EDTA helped recover the iron from the precipitation. The transformation of FeEDTA did not retard the NO removal. In addition, EDTA rather than the iron concentration determined the NO removal efficiency.

  14. Multi-species measurements of nitrogen isotopic composition reveal the spatial constraints and biological drivers of ammonium attenuation across a highly contaminated groundwater system.

    Science.gov (United States)

    Wells, Naomi S; Hakoun, Vivien; Brouyère, Serge; Knöller, Kay

    2016-07-01

    Groundwater under industrial sites is characterised by heterogeneous chemical mixtures, making it difficult to assess the fate and transport of individual contaminants. Quantifying the in-situ biological removal (attenuation) of nitrogen (N) is particularly difficult due to its reactivity and ubiquity. Here a multi-isotope approach is developed to distinguish N sources and sinks within groundwater affected by complex industrial pollution. Samples were collected from 70 wells across the two aquifers underlying a historic industrial area in Belgium. Below the industrial site the groundwater contained up to 1000 mg N l(-1) ammonium (NH4(+)) and 300 mg N l(-1) nitrate (NO3(-)), while downgradient concentrations decreased to ∼1 mg l(-1) DIN ([DIN] = [NH4(+)N] + [NO3(-)N] + [NO2(-)N]). Mean δ(15)N-DIN increased from ∼2‰ to +20‰ over this flow path, broadly confirming that biological N attenuation drove the measured concentration decrease. Multi-variate analysis of water chemistry identified two distinct NH4(+) sources (δ(15)NNH4(+) from -14‰ and +5‰) within the contaminated zone of both aquifers. Nitrate dual isotopes co-varied (δ(15)N: -3‰ - +60‰; δ(18)O: 0‰ - +50‰) within the range expected for coupled nitrification and denitrification of the identified sources. The fact that δ(15)NNO2(-) values were 50‰-20‰ less than δ(15)NNH4(+) values in the majority of wells confirmed that nitrification controlled N turnover across the site. However, the fact that δ(15)NNO2(-) was greater than δ(15)NNH4(+) in wells with the highest [NH4(+)] shows that an autotrophic NO2(-) reduction pathway (anaerobic NH4(+) oxidation or nitrifier-denitrification) drove N attenuation closest to the contaminant plume. This direct empirical evidence that both autotrophic and heterotrophic biogeochemical processes drive N attenuation in contaminated aquifers demonstrates the power of multiple N isotopes to untangle N cycling in highly complex

  15. Enzymology of biological nitrogen fixation

    Energy Technology Data Exchange (ETDEWEB)

    Burris, R.H.

    1992-01-01

    Two genes involved in the regulation of nitrogenase activity, draT and draG, were cloned and found to be contiguous on the Azospirillum brasilense chromosome. The nifH gene, encoding dinitrogenase reductase, is near to draT with an intervening gap of 1.9 kb. The organization of these genes in Azospirillum lipoferum and Rhodosprillum rubrum is similar, but nifH and draT are separated by only 400 bp in the organisms. A. brasilense draTG is very similar to draTG in R. rubrum with 91.8% similarity and 85.3% identity at the amino acid level. Apparently A. brasilense uses the normal ATG initiation codon for draT, and draG. The genes for A. brasilense were able to restore function to appropriate mutants of R. rubrum. The heterologous expression of A. brasilense draTG in R. rubrum was not fully normal, as it responded more slowly to darkness and more quickly to ammonia than wild type cells. Our mutational analysis of the draTG region of A. brasilense confirms the function of these genes in the regulation of nitrogenase activity, but it also revealed minor but demonstrable differences in the control systems of R. rubrum and A. brasilense.

  16. Transformation of Contaminant Candidate List (CCL3) compounds during ozonation and advanced oxidation processes in drinking water: Assessment of biological effects.

    Science.gov (United States)

    Mestankova, Hana; Parker, Austa M; Bramaz, Nadine; Canonica, Silvio; Schirmer, Kristin; von Gunten, Urs; Linden, Karl G

    2016-04-15

    The removal of emerging contaminants during water treatment is a current issue and various technologies are being explored. These include UV- and ozone-based advanced oxidation processes (AOPs). In this study, AOPs were explored for their degradation capabilities of 25 chemical contaminants on the US Environmental Protection Agency's Contaminant Candidate List 3 (CCL3) in drinking water. Twenty-three of these were found to be amenable to hydroxyl radical-based treatment, with second-order rate constants for their reactions with hydroxyl radicals (OH) in the range of 3-8 × 10(9) M(-1) s(-1). The development of biological activity of the contaminants, focusing on mutagenicity and estrogenicity, was followed in parallel with their degradation using the Ames and YES bioassays to detect potential changes in biological effects during oxidative treatment. The majority of treatment cases resulted in a loss of biological activity upon oxidation of the parent compounds without generation of any form of estrogenicity or mutagenicity. However, an increase in mutagenic activity was detected by oxidative transformation of the following CCL3 parent compounds: nitrobenzene (OH, UV photolysis), quinoline (OH, ozone), methamidophos (OH), N-nitrosopyrolidine (OH), N-nitrosodi-n-propylamine (OH), aniline (UV photolysis), and N-nitrosodiphenylamine (UV photolysis). Only one case of formation of estrogenic activity was observed, namely, for the oxidation of quinoline by OH. Overall, this study provides fundamental and practical information on AOP-based treatment of specific compounds of concern and represents a framework for evaluating the performance of transformation-based treatment processes.

  17. Taurolidine Antiadhesive Properties on Interaction with E. coli; Its Transformation in Biological Environment and Interaction with Bacteria Cell Wall

    OpenAIRE

    Francesco Caruso; James W Darnowski; Cristian Opazo; Alexander Goldberg; Nina Kishore; Agoston, Elin S.; Miriam Rossi

    2010-01-01

    The taurine amino-acid derivative, taurolidine, bis-(1,1-dioxoperhydro-1,2,4-thiabiazinyl-4)methane, shows broad antibacterial action against gram-positive and gram-negative bacteria, mycobacteria and some clinically relevant fungi. It inhibits, in vitro, the adherence of Escherichia coli and Staphylococcus aureus to human epithelial and fibroblast cells. Taurolidine is unstable in aqueous solution and breaks down into derivatives which are thought to be responsible for the biological activit...

  18. An improved analytical method for the determination of urea nitrogen isotopomers in biological samples utilizing continuous flow isotope ratio mass spectrometry.

    Science.gov (United States)

    Marini, Juan C; Attene-Ramos, Matias Sebastian

    2006-01-01

    Over the past few years numerous dual inlet isotope ratio mass spectrometry (IRMS) applications have been adapted to continuous flow systems which allow the automation of sample admission and a higher throughput. The isotopomer analysis of urea nitrogen by IRMS requires the offline conversion of urea into nitrogen gas before analysis. The oxidation of urea with LiOBr results in the monomolecular degradation of urea, which preserves the identity of the parent urea molecule, and has to be conducted under vacuum to prevent contamination with atmospheric nitrogen. We have developed an offline system of urea degradation utilizing disposable Exetainers, in which atmospheric nitrogen is displaced by helium. Recovery of urea nitrogen was linear within the range of the standards tested (0 to 420 microg nitrogen) and standard curves for 15N15N-urea standards showed high coefficients of determination (R2 > 0.9998). A small portion of urea degrades in a non-monomolecular fashion and has been shown to depend on the concentration of urea in the sample. Long-term storage of prepared samples showed a decline in 15N15N enrichment, suggesting air contamination. However, samples were stable for 24 h, which allows for the analysis of large sample batches. Interest in urea metabolism, particularly in ruminant species, has increased recently due to the environmental implications of urea and nitrogen excretion by farm animals. This novel analytical method will allow for accurate measurements and the rapid throughput needed in order to support these field studies.

  19. Taurolidine antiadhesive properties on interaction with E. coli; its transformation in biological environment and interaction with bacteria cell wall.

    Directory of Open Access Journals (Sweden)

    Francesco Caruso

    Full Text Available The taurine amino-acid derivative, taurolidine, bis-(1,1-dioxoperhydro-1,2,4-thiabiazinyl-4methane, shows broad antibacterial action against gram-positive and gram-negative bacteria, mycobacteria and some clinically relevant fungi. It inhibits, in vitro, the adherence of Escherichia coli and Staphylococcus aureus to human epithelial and fibroblast cells. Taurolidine is unstable in aqueous solution and breaks down into derivatives which are thought to be responsible for the biological activity. To understand the taurolidine antibacterial mechanism of action, we provide the experimental single crystal X-ray diffraction results together with theoretical methods to characterize the hydrolysis/decomposition reactions of taurolidine. The crystal structure features two independent molecules linked through intermolecular H-bonds with one of them somewhat positively charged. Taurolidine in a biological environment exists in equilibrium with taurultam derivatives and this is described theoretically as a 2-step process without an energy barrier: formation of cationic taurolidine followed by a nucleophilic attack of O(hydroxyl on the exocyclic C(methylene. A concerted mechanism describes the further hydrolysis of the taurolidine derivative methylol-taurultam. The interaction of methylol-taurultam with the diaminopimelic NH(2 group in the E. coli bacteria cell wall (peptidoglycan has a negative DeltaG value (-38.2 kcal/mol but a high energy barrier (45.8 kcal/mol suggesting no reactivity. On the contrary, taurolidine docking into E. coli fimbriae protein, responsible for bacteria adhesion to the bladder epithelium, shows it has higher affinity than mannose (the natural substrate, whereas methylol-taurultam and taurultam are less tightly bound. Since taurolidine is readily available because it is administered in high doses after peritonitis surgery, it may successfully compete with mannose explaining its effectiveness against bacterial infections at

  20. Taurolidine antiadhesive properties on interaction with E. coli; its transformation in biological environment and interaction with bacteria cell wall.

    Science.gov (United States)

    Caruso, Francesco; Darnowski, James W; Opazo, Cristian; Goldberg, Alexander; Kishore, Nina; Agoston, Elin S; Rossi, Miriam

    2010-01-28

    The taurine amino-acid derivative, taurolidine, bis-(1,1-dioxoperhydro-1,2,4-thiabiazinyl-4)methane, shows broad antibacterial action against gram-positive and gram-negative bacteria, mycobacteria and some clinically relevant fungi. It inhibits, in vitro, the adherence of Escherichia coli and Staphylococcus aureus to human epithelial and fibroblast cells. Taurolidine is unstable in aqueous solution and breaks down into derivatives which are thought to be responsible for the biological activity. To understand the taurolidine antibacterial mechanism of action, we provide the experimental single crystal X-ray diffraction results together with theoretical methods to characterize the hydrolysis/decomposition reactions of taurolidine. The crystal structure features two independent molecules linked through intermolecular H-bonds with one of them somewhat positively charged. Taurolidine in a biological environment exists in equilibrium with taurultam derivatives and this is described theoretically as a 2-step process without an energy barrier: formation of cationic taurolidine followed by a nucleophilic attack of O(hydroxyl) on the exocyclic C(methylene). A concerted mechanism describes the further hydrolysis of the taurolidine derivative methylol-taurultam. The interaction of methylol-taurultam with the diaminopimelic NH(2) group in the E. coli bacteria cell wall (peptidoglycan) has a negative DeltaG value (-38.2 kcal/mol) but a high energy barrier (45.8 kcal/mol) suggesting no reactivity. On the contrary, taurolidine docking into E. coli fimbriae protein, responsible for bacteria adhesion to the bladder epithelium, shows it has higher affinity than mannose (the natural substrate), whereas methylol-taurultam and taurultam are less tightly bound. Since taurolidine is readily available because it is administered in high doses after peritonitis surgery, it may successfully compete with mannose explaining its effectiveness against bacterial infections at laparoscopic lesions.

  1. Epitaxial transformation of hcp–fcc Ti sublattices during nitriding processes of evaporated-Ti thin films due to nitrogen-implantation

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Yu; Feng, Xiaoyi [Department of Metallurgy, Tohoku University, Aramaki-Aza-Aoba 02, Sendai 980-8579 (Japan); Kasukabe, Yoshitaka, E-mail: kasukabe@insc.tohoku.ac.jp [Department of Metallurgy, Tohoku University, Aramaki-Aza-Aoba 02, Sendai 980-8579 (Japan); Center for International Exchange, Tohoku University, 41 Kawauchi, Sendai 980-8576 (Japan); Yamamoto, Shunya; Yoshikawa, Masahito [Quantum Beam Science Directorate, JAEA, 1233 Watanuki, Takasaki 370-1292 (Japan); Fujino, Yutaka [Center for International Exchange, Tohoku University, 41 Kawauchi, Sendai 980-8576 (Japan)

    2013-11-15

    Highlights: ► Atomistic transformation processes of Ti films due to N-implantation have been clarified. ► The N{sub 2}{sup +} ions with 62 keV are implanted into as-deposited Ti film in the in-situ TEM. ► The hcp-fcc transformation is induced by the shear in the <0 1 · 0> direction on the (<0 0 · 1>) plane. ► The shear is promoted by the forming of covalent bonds and by the weakening of Ti–Ti bonds. -- Abstract: Atomistic transformation processes of Ti films due to N-implantation have been clarified through in-situ observations by using transmission electron microscope (TEM) along with molecular orbital calculations. The N{sub 2}{sup +} ions with 62 keV are implanted into as-deposited Ti films which consist of hcp-Ti and TiH{sub x} with preferred orientations, in the 400 kV analytic high resolution TEM combined with ion accelerators. Thus, titanium nitride (TiN{sub y}) films with preferred orientations are epitaxially formed by the inheritance of partial atomic arrangement of hcp-Ti or TiH{sub x} in as-deposited Ti films and by the occupation of octahedral sites by N atoms, which elucidates that epitaxial transformation of hcp–fcc Ti sublattices occurs. The analysis of electronic structure of Ti films during the implantation clarifies that octahedral sites of hcp-Ti with larger space have lower electron density, which leads to the invasion of N ions into octahedral sites. Thus, the hcp–fcc transformation is induced by the shear in the <0 1 · 0> direction on the (0 0 · 1) plane, promoted by the forming of covalent bonds mainly composed of hybridized orbitals due to combination of Ti3d and N2p orbitals, and by the weakening of Ti–Ti bonds.

  2. 组合型生态浮床中有机物及氮的去除转化%Transformation and removal of organic matter and nitrogen by integrated ecological floating bed

    Institute of Scientific and Technical Information of China (English)

    王国芳; 汪祥静; 吴磊; 李先宁

    2012-01-01

    通过设置水生植物浮床A、植物介质浮床B及植物介质河蚌浮床(组合型生态浮床)C等3个不同层次配置的浮床,考察了同样的运行条件下,各浮床出水中不同形态的有机物及氮的质量浓度变化,分析了浮床中各配置对有机物及氮的去除转化规律,同时研究了三角帆蚌对人工介质微生物富集特性的影响.结果表明:人工介质对溶解性的有机物及氮起到了明显的去除作用,三角帆蚌通过滤食消化促进了有机颗粒物的可溶化和无机化,对氮形态的转化起到了重要作用,从而提高了组合型生态浮床对氮的去除效果;三角帆蚌的引入增强了单位人工介质上微生物的TTC-脱氢酶活性与硝化细菌密度,从另一角度阐明了三角帆蚌对有机物及氮去除转化促进的特性.%Three kinds of floating beds of aquatic plants floating bed A, aquatic plants with artificial medium floating bed B and integrated ecological floating bed C with aquatic plants, artificial medium and a-quatic animals were established. The concentrations of organic matter and nitrogen with different forms in the beds were investigated, and the contaminant removal characteristic by different units was also analyzed. The influence of Hyriopsis cumingii on the microorganism enrichment character of artificial medium was discussed. The results show that artificial medium has obvious efficiency for removing deliquescent organic matter and nitrogen. The Hyriopsis cumingii promotes the solubilization and mineralization of par-ticulate organic matters by filtration and digestion to realize nitrogen transformation with improved nitrogen removal rate. The Hyriopsis cumingii can increase TTC-dehydrogenase activity of microorganism on artificial medium and raise the nitrifying bacteria density, which illuminates that organic matters and nitrogen removal can be improved by Hyriopsis cumingii.

  3. 新型硝化抑制剂对外源铵态氮在土壤中迁移转化及淋溶损失的影响%Effect of New Nitrification Inhibitors on Nitrogen Transform and Leaching

    Institute of Scientific and Technical Information of China (English)

    李兆君; 宋阿琳; 范分良; 梁永超

    2011-01-01

    本文通过采用自制土柱装置,进行新型硝化抑制剂对氮素迁移转化及其淋溶损失的试验,探讨其对氮素垂直迁移和淋溶损失的影响,以及硝化抑制剂自身的有效性.结果表明:在27 d内,新型硝化抑制剂能显著抑制土壤铵氧化过程的发生,显著提高20 cm以上表层土壤铵态氮含量,降低表层土壤硝态氮含量;深层土壤地下水硝态氮浓度显著低于未加硝化抑制剂的对照土壤地下水的浓度,明显降低硝态氮垂直迁移的淋溶损失;不同的硝化抑制剂对土壤地下水氮素的迁移转化影响存在着显著的不同.%In order to explore the effect of new nitrification inhibitors on vertical migration and leaching losses of nitrogen and effectiveness of nitrification inhibitors, the experiment that new nitrification inhibitors'role in migration and transformation and leaching loss of nitrogen was determined were conducted with the soil column device. The results showed that new nitrification inhibitors could significantly inhibit the oxidation of soil ammonium within 27 days, and increase ammonium nitrogen content, decrease nitrate nitrogen above 20 cm soil. The nitrate concentrations of groundwater in deep soil were significantly lower than that in control soil, so new nitrification inhibitors significantly reduced the nitrate leaching losses of the vertical migration. The effects of different nitrification inhibitors on the migration of nitrogen in soil groundwater existed difference.

  4. [Temporal-spatial distribution of agricultural diffuse nitrogen pollution and relationship with soil respiration and nitrification].

    Science.gov (United States)

    Wei, Ouyang; Cai, Guan-Qing; Huang, Hao-Bo; Geng, Xiao-Jun

    2014-06-01

    The soil respiration, nitrification and denitrification processes play an important role on soil nitrogen transformation and diffuse nitrogen loading. These processes are also the chains for soil circle. In this study, the Zhegao watershed located north of Chaohu Lake was selected to explore the interactions of these processes with diffuse nitrogen pollution. The BaPS (Barometric Process Separation) was applied to analyze the soil respiration, nitrification and denitrification processes in farmland and forest. The SWAT (Soil and Water Assessment Tool) simulated the temporal and spatial pattern of diffuse nitrogen loading. As the expanding of farmland and higher level of fertilization, the yearly mean loading of diffuse nitrogen increased sustainably from 1980-1995 to 1996-2012. The monthly loading in 1996-2012 was also higher than that in the period of 1980-1995, which closely related to the precipitation. The statistical analysis indicated that there was a significant difference between two periods. The yearly averaged loading of the whole watershed in 1996-2012 was 10.40 kg x hm(-2), which was 8.10 kg x hm(-2) in 1980-1995. The variance analysis demonstrated that there was also a big difference between the spatial distributions of two periods. The forest soil had much higher soil respiration than the farmland soil. But the farmland had higher nitrification and denitrification rates. The more intensive nitrogen transformation in the farmland contributed to the less diffuse nitrogen loading. As the nitrification rate of farmland was higher than denitrification rate, agricultural diffuse nitrate nitrogen loading would increase and organic nitrogen loading would reduce. The analysis of soil respiration, nitrification and denitrification is helpful for the study of soil nitrogen circle form the aspect of soil biology, which also benefits the control of agricultural diffuse nitrogen pollution.

  5. The Influence of No-Till, Conventional Tillage and Nitrogen Fertilization on Physico-Chemical and Biological Indicators After Three Years of Monoculture Barley

    Directory of Open Access Journals (Sweden)

    Cristina Menta

    2008-12-01

    Full Text Available An experimental trial was carried out over three years at Cavacurta (Po valley, Italy on continuous barley. The soil was a coarse-loamy over sandy, mixed, mesic Fluventic Ustochrept. The experimental design was a split-plot with four replicates; the main factor was the soil management system (conventional tillage, CT, and no-tillage, NT, while the secondary factor was the nitrogen fertilization (N0 = 0, N1 = 50 and N2 = 90 kg N ha-1 year-1. At the end of the third year soil samples were taken in all plots at four depths (0-5, 5-10, 10-15 and 15-20 cm. For these samples, pH, organic matter, total N, available P and cation exchange capacity were determined. On the contrary, water aggregate stability was determined for a single layer (0-20 cm depth, excluding the N1 level of fertilization. The biological indicator, QBS-ar index, was studied only in the layer 0-10 cm. Statistical analysis shows that no-till positively influenced all the indices except for CEC and QBS-ar. N fertilization had significant effects on CEC only; in the upper layer, the value in N2 subplots was of approx. 1 cmol+ kg-1 higher than in N0 and N1 subplots. There was no significant interaction for any of the indices. As regards only the 0-20 cm layer, the most important results are as follows. The organic matter content in NT plots was significantly higher than in CT plots (32.6 vs 29.8 g kg-1, as was the total N (2.11 vs 1.97 g kg-1. No-till also had a very clear effect on the Olsen-P (12.3 vs 9.3 mg kg-1. The most remarkable result was found for the water aggregate stability: for NT plots the value was 246% higher than for CT plots (34.3 vs 9.9%. As regards the microarthropod community, the value of the QBS-ar index was between 90 and 126, a typical range for soil under barley.

  6. Single-crystalline MFe(2)O(4) nanotubes/nanorings synthesized by thermal transformation process for biological applications.

    Science.gov (United States)

    Fan, Hai-Ming; Yi, Jia-Bao; Yang, Yi; Kho, Kiang-Wei; Tan, Hui-Ru; Shen, Ze-Xiang; Ding, Jun; Sun, Xiao-Wei; Olivo, Malini Carolene; Feng, Yuan-Ping

    2009-09-22

    We report a general thermal transformation approach to synthesize single-crystalline magnetic transition metal oxides nanotubes/nanorings including magnetite Fe(3)O(4), maghematite gamma-Fe(2)O(3), and ferrites MFe(2)O(4) (M = Co, Mn, Ni, Cu) using hematite alpha-Fe(2)O(3) nanotubes/nanorings template. While the straightforward reduction or reduction-oxides process was employed to produce Fe(3)O(4) and gamma-Fe(2)O(3), the alpha-Fe(2)O(3)/M(OH)(2) core/shell nanostructure was used as precursor to prepare MFe(2)O(4) nanotubes via MFe(2)O(4-x) (0 MFe(2)O(4) nanocrystals with tunable size, shape, and composition have exhibited unique magnetic properties. Moreover, they have been demonstrated as a highly effective peroxidase mimic catalysts for laboratory immunoassays or as a universal nanocapsules hybridized with luminescent QDs for magnetic separation and optical probe of lung cancer cells, suggesting that these biocompatible magnetic nanotubes/nanorings have great potential in biomedicine and biomagnetic applications.

  7. 竹炭包膜尿素的氮素释放规律和生物利用效果研究%Study on the Nitrogen Release Law of Bamboo Charcoal-coated Urea and Its Biological Utilization Effects

    Institute of Scientific and Technical Information of China (English)

    纪锐琳; 朱义年; 张爱莉; 张学洪

    2007-01-01

    [Objective]The study about the nitrngen releasing law of bamboo-charcoal coated urea and the biologic utilization effect wag to find the coated urea with high efficiency,low price and simple production technology.[Method]Two kinds of bamboo-charcoal coated urea(BCCU)with different coating thickness were made by using bambon-charcoal and macromolecule polymer as coating material.The experiments of soil eluviate,ammonia volatilization in corn field and potted plant of corn were conducted to study the nitrogen releasing law and the bidngic utilization effect of self-made BCCU.[Result]The BCCU showed some slow-release capability and their accumulated nitrogen releasing rates in 29 d were 9.93%-16.27% lower than that of norlnal urea.Compared With the normal urea,the volatilization rate of ammoniain BCCU reduced to 16.66%-31.8%,the biomass of Crn and nitrogen utilization rate increased by 12.8%-24.1%and 10.5%-16.99%,respectively.[Conclusion]Bamboo-charcoal in coated urea not only had some slow-release capabjlity.but also had some adsorbability,Which would reducethe eluviation and volatilization of nitrogen and protect environment from N pollution.

  8. 复合生物反应器亚硝酸型同步硝化反硝化脱氮%Nitrogen Removal by Simultaneous Nitrification and Denitrification via Nitrite in a Sequence Hybrid Biological Reactor

    Institute of Scientific and Technical Information of China (English)

    王建龙; 彭永臻; 王淑莹; 高永青

    2008-01-01

    Sequence hybrid biological reactor(SHBR)was proposed,and some key control parameters were in-vestigated for nitrogen removal from wastewater by simultaneous nitrification and denitrification(SND)via nitrite.sND via nitrite was achieved in SHBR by controlling demand oxygen(DO)concentration.There was a pro-did not destroy the partial nitrification to nitrite.The results showed that limited air flow rate to cause oxygen defi-ciency in the reactor would eventually induce only nitrification to nitrite and not further to nitrate.Nitrogen removal efficiency was increased with the increase in NAR,that iS,NAR was increased from 60%to 90%,and total nitrogen removal efficiency was increased from 68%t0 85%.The SHBR could tolerate high organic loading rate(OLR),COD and ammonia-nitrogen removal efficiency were greater than92%and 93.5%respectively and it even oper-biofilm positively affected the activated sludge settling capability,and sludge volume index(svi)of activated sludge in SHBR never hit more than 90 ml.g-1 throughout the experiments.

  9. Effects of herbicides on transformation of urea nitrogen in vegetable plantation soil%除草剂对尿素氮在土壤中转化的影响

    Institute of Scientific and Technical Information of China (English)

    丁洪; 郑祥洲; 雷俊杰; 张玉树; 陈静蕊; 李世清

    2012-01-01

    在实验室培养条件下研究除草剂草甘膦和丁草胺对尿素氮在菜地土壤中转化的影响.实验设对照、尿素、尿素+草甘膦和尿素+丁草胺4个处理,尿素氮用量为200 mg·kg-1(以干土计),除草剂用量为w(有效成分)-10 mg·kg-1(以干土计).结果表明,草甘膦和丁草胺对尿素氨化作用不产生抑制作用,甚至出现促进效果.2种除草剂在培养的前2d均显著抑制硝化作用,但到第4天时显著促进硝化作用(P<0.05).草甘膦对反硝化作用表现显著的抑制作用(P<0.05),而丁草胺对反硝化作用有极显著的促进作用(P<0.01);丁草胺+尿素、尿素、草甘膦+尿素处理的反硝化损失量分别占施氮量的16.90%、6.34%和3.66%.可见,除草剂对土壤氮素转化有一定影响,但不同除草剂对氮素各个转化途径的影响有明显差异,不同除草剂品种间影响程度也不同.%To assess the effects of herbicides on transformation of urea nitrogen in vegetable plantation soil, an incubation experiment was conducted under laboratory condition with 4 treatments including control, urea, urea+glyphosate and urea+butachlor, w(N)=200 mg·kg-1 by dry soil and inactive ingredient)=10 mg·kg-1 by dry soil were applied in urea and herbicide treatments respectively. The experimental results showed that glyphosate and butachlor had no negative impact on ammonification of urea or improved the ammonification activity; retarded the nitrifying rates of soil in 2 days in the beginning, but accelerated the rates at the 4th day significantly (P<0.05); Glyphosate inhibited denitrification (P<0.05), but butachlor promoted one (P<0.01). The nitrogen loss amounts by denitrification occupied 16.90%. 6.34% and 3.66% of urea nitrogen applied in urea+butachlor, urea and urea+glyphosate treatments, respectively. In conclusion, herbicides markedly affected nitrogen transformation in soil, but different kind of herbicides appeared different impacts on processes

  10. 煤炭解耦燃烧过程N迁移与转化Ⅰ:热解阶段煤N的释放规律%Nitrogen transformation during coal decoulping combustion Ⅰ: release behavior of coal-nitrogen during pyrolysis stage

    Institute of Scientific and Technical Information of China (English)

    谢建军; 杨学民; 朱文魁; 丁同利; 宋文立; 林伟刚

    2012-01-01

    在固定床装置上进行了三种煤的热解实验,考察了热解温度、热解时间等因素对煤氮迁移转化的影响.热解实验表明,A煤1073 K热解产生HCN,在热解前3min释放完毕,早于NH3释放,且当NH3开始逸出后HCN生成量急剧减少;三种煤热解HCN、NH3的累积释放量在不同时刻达到各自最大值后急剧下降;半焦氮随热解温度的升高而增加.在973 ~1123 K三种煤热解有50%~ 60%煤氮转化为焦氮,40%~50%煤氮随挥发分一起释放,挥发分氮有20%~50%的氮物种以NH3和HCN的形式存在,其中,HCN占气相氮的50%~60%、NH3占40% ~ 50%.%Effect of temperature and residence time on coal-nitrogen transformation during pyrolysis of 3 coals from west China was studied in a fixed bed reactor. The results show that the duration time of HCN releasing is about 3 min at 1 073 K for pyrolysis of coal A. The start release time of HCN is earlier than that of NH3, and the released amount of HCN quickly drops to zero as NH3 starts to release. The accumulated release amounts of HCN and NH3 first reach the maximum value at different pyrolysis time and then decrease sharply. The yield of char-nitrogen increases with increasing temperature. At 973 ~ 1 123 K, about 50~60 mass percentage of the coal-nitrogen exits in char as char-nitrogen and the rest is released as volatiles, in which about 20 ~ 50 mass percentage of the volatile-nitrogen is NH3 and HCN. The mass percentage of NH3 accounts for 40%~50% and that of HCN about 50%~60% in the volatile-nitrogen.

  11. Epistemological conceptions of biology majors and their transformation by an explicit proposal for teaching history and philosophy of science

    Directory of Open Access Journals (Sweden)

    Charbel Niño El-Hani

    2004-12-01

    Full Text Available This paper reports the results obtained in the test of a proposal for the teaching of history and philosophy of science to Higher Education students enrolled in courses on natural sciences. The proposal takes actual historical examples as a basis for eliciting discussions about philosophical issues. It amounts to an explicit approach, directly addressing epistemological contents, which was elaborated and tested from the perspective of a teacher-researcher. The proposal was tested through a quali-quantitative approach. Data were gathered in a class of a course on history and philosophy of science for Biology majors, through the questionnaire VNOS-C (Views of the Nature of Science, Form C, at the beginning and end of a term. They were qualitatively treated by analyzing categories built from the answers given by the students. Based on some issues agreed upon by several post-positivist theories of science, we evaluated the adequacy of the students’ epistemological views, obtaining scores for each question, the sum of which resulted in a total score for each questionnaire. The effects of the proposal on the students’ views were analyzed qualitative and quantitatively by means of a discussion of the frequencies of adequate, partially adequate, and inadequate answers to each question and a statistical test comparing the total scores of each student, in the pre- and post-tests. To analyze the effects on each epistemological aspect addressed in the questionnaire, we performed tests comparing the scores obtained by the students in each question, at the beginning and end of the term. Generally speaking, the proposal resulted in an evolution of the views about the nature of science of all students who did both the pre- and post-tests. It was more effective in promoting a change in views about the demarcation between science and other ways of knowing, the differences between laws and theories, and the relationship between models and evidence

  12. Early-warning process/control for anaerobic digestion and biological nitrogen transformation processes: Batch, semi-continuous, and/or chemostat experiments. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Hickey, R. [Science Applications International Corp., McLean, VA (United States)

    1992-09-01

    The objective of this project was to develop and test an early-warning/process control model for anaerobic sludge digestion (AD). The approach was to use batch and semi-continuously fed systems and to assemble system parameter data on a real-time basis. Specific goals were to produce a real-time early warning control model and computer code, tested for internal and external validity; to determine the minimum rate of data collection for maximum lag time to predict failure with a prescribed accuracy and confidence in the prediction; and to determine and characterize any trends in the real-time data collected in response to particular perturbations to feedstock quality. Trends in the response of trace gases carbon monoxide and hydrogen in batch experiments, were found to depend on toxicant type. For example, these trace gases respond differently for organic substances vs. heavy metals. In both batch and semi-continuously feed experiments, increased organic loading lead to proportionate increases in gas production rates as well as increases in CO and H{sub 2} concentration. An analysis of variance of gas parameters confirmed that CO was the most sensitive indicator variable by virtue of its relatively larger variance compared to the others. The other parameters evaluated including gas production, methane production, hydrogen, carbon monoxide, carbon dioxide and methane concentration. In addition, a relationship was hypothesized between gaseous CO concentration and acetate concentrations in the digester. The data from semicontinuous feed experiments were supportive.

  13. 转BADH基因大豆对盐碱土壤氮素转化的影响%Effects of transgenic BADH soybean on nitrogen transformation in saline-alkaline soil

    Institute of Scientific and Technical Information of China (English)

    刘志华; 姜振峰; 张少良; 周洁; 于崧; 王宏燕

    2014-01-01

    以转甜菜碱醛脱氢酶(betaine aldehyde dehydrogenase)基因(BADH)大豆、非转基因亲本‘黑农35’、野生大豆、当地栽培种‘抗线王’、耐盐碱性较差品种‘合丰50’等5种大豆品种为材料,在典型盐碱土封闭种植,于大豆苗期、花荚期、鼓粒期和成熟期取根际土,采用经典方法测定氮素转化过程相关的细菌数量、生化功能及速效氮含量等指标的动态变化,为揭示转 BADH 基因大豆对土壤氮素转化的影响机制提供理论支持。结果表明:与非转基因亲本相比,转 BADH 基因大豆对苗期和花荚期根际土壤固氮菌数量有促进作用,但抑制苗期和花荚期根际土壤氨化细菌数量,对硝化细菌数量无显著性影响;显著促进成熟期大豆根际土壤固氮作用强度,对大豆苗期、花荚期和鼓粒期根际土壤氨化作用强度有显著抑制作用,显著促进各生育时期硝化作用强度;转 BADH 基因大豆苗期和花荚期根际土壤铵态氮含量显著降低,对鼓粒期根际土壤铵态氮含量无显著性影响,成熟期根际土壤铵态氮含量显著增高,大豆苗期、鼓粒期和成熟期根际土壤硝态氮含量显著升高,花荚期根际硝态氮含量显著降低。研究结果说明,转 BADH 基因大豆通过调节苗期、花期根际土壤氮素转化功能菌数量和生化过程强度进而影响氮素转化。%In this study, five cultivars of soybean, which were transgenic soybean by betaine aldehyde dehydrogenase (BADH) gene, non-transgenic parent‘Heinong35’, wild soybean cultivar, local cultivar of‘Kangxianwang’ and salt sensitive cultivar‘Hefeng 50’, were planted in saline-alkali soil. The rhizospheric soil was sampled respectively at seeding stage, flowering and podding stage, pod-filling stage and maturity stage to determine (using classical methods) dynamic changes in bacteria population related to nitrogen transformation

  14. Effect of covering on nitrogen transformation and the quality of pig manure-straw compost%覆盖处理对猪粪秸秆堆肥中氮素转化和堆肥质量的影响

    Institute of Scientific and Technical Information of China (English)

    黄华; 黄懿梅; 刘学玲; 姜继韶

    2013-01-01

    The aerated static pile method was used to investigate the effect of covering on nitrogen transformation and the quality of a pig manure-straw compost during the composting process. Nitrogen forms and other indexes were determined in the different layers, i. e. , the bottom layer and top layer, in the composts covered with and without matured compost. The results showed that; the covered composts had lower moisture, germination index ( GI) of the end of composting, and pH value in heating and thermophilic phases; however, it increased EC value of the composts in cooling phase. The temperature in the composts had no significant difference. The covering delayed ammonia emission in the bottom layer at the beginning of composting period, while the percentage of accumulated ammonia in total nitrogen did not change. During composting, the increase rates of NO3~ -N , organic-N , total nitrogen and total phosphorus in the bottom of the covered compost were 66. 7% , 33. 8% , 32.1% and 138. 6% higher than the corresponding control, respectively. However, the degradation rate of organic carbon and contents of NH4+ -N and humus decreased by 1. 1 % , 8.0% and 3.7% , respectively. The changes of pH, NH4+ -N and NO3- -N contents in top layer of the covered composts indicated that the released ammonia in the bottom layer can be absorbed and nitrified. The top layer of compost was mineralized, and influenced the process of nitrogen transformation and quality of composts in the bottom layer.%为了探讨覆盖措施对堆肥化中氮素转化与堆肥质量的影响,在自制的强制通风静态堆肥箱中,模拟研究了覆盖腐熟堆肥后,下层猪粪秸秆堆肥及覆盖层中氮素形态和其他腐熟度指标的变化.结果表明:覆盖处理降低了下层堆肥中的含水率、种子发芽指数(GI值)、升温期和高温期的pH值,增大了降温期后的堆肥电导率EC值,而对堆温影响不大.覆盖处理未改变堆制初期下层

  15. Development of cooling system for 66/6.9kV-20MVA REBCO superconducting transformers with Ne turbo-Brayton refrigerator and subcooled liquid nitrogen

    Science.gov (United States)

    Iwakuma, M.; Adachi, K.; Yun, K.; Yoshida, K.; Sato, S.; Suzuki, Y.; Umeno, T.; Konno, M.; Hayashi, H.; Eguchi, T.; Izumi, T.; Shiohara, Y.

    2015-12-01

    We developed a turbo-Brayton refrigerator with Ne gas as a working fluid for a 3 ϕ- 66/6.9kV-2MVA superconducting transformer with coated conductors which was bath-cooled with subcooled LN2. The two-stage compressor and expansion turbine had non-contact magnetic bearings for a long maintenance interval. In the future, we intend to directly install a heat exchanger into the Glass-Fiber-Reinforced-Plastics cryostat of a transformer and make a heat exchange between the working fluid gas and subcooled LN2. In this paper we investigate the behaviour of subcooled LN2 in a test cryostat, in which heater coils were arranged side by side with a flat plate finned-tube heat exchanger. Here a He turbo-Brayton refrigerator was used as a substitute for a Ne turbo-Brayton one. The pressure at the surface of LN2 in the cryostat was one atmosphere. Just under the LN2 surface, a stationary layer of LN2 was created over the depth of 20 cm and temperature dropped from 77 K to 65 K with depth while, in the lower level than that, a natural convection flow of LN2 was formed and temperature was almost uniform over 1 m depth. The boundary plane between the stationary layer and the natural convection region was visible.

  16. 生物硝化抑制剂——一种控制农田氮素流失的新策略%BIOLOGICAL NITRIFICATION INHIBITOR-A NEW STRATEGY FOR CONTROLLING NITROGEN LOSS FROM FARMLAND

    Institute of Scientific and Technical Information of China (English)

    曾后清; 朱毅勇; 王火焰; 沈其荣

    2012-01-01

    Application of nitrogen fertilizers in agricultural systems is one of the most important factors influencing the global nitrogen cycle. Nitrogen fertilizers can improve crop production, but also have much influence on ecological environment. Nitrogen fertilizers in ammonium form ( NH4+ ) is easily transferred into nitrate form ( NO3" ) in dry land by nitrification. However, only a small portion of the formed NO3~ can be taken up by plants, while a large amount will be leached or released into the air through denitrification, which results in severe nitrogen loss. In nature some plants can excrete through their roots some compounds that have the function of inhibiting nitrification and thus can be characterized as biological nitrification inhibitor (BNI) , which may significantly improve nitrogen use efficiency in soil. This review illustrates the origin, excretion and regulation of the substances, mechanisms of their function and potential of their application, and also discusses prospects of their application to high efficiency management of nitrogen in agricultural systems.%农业生产中氮肥的施用是影响全球氮素循环的一个重要因素,在促进作物增产的同时,也对生态环境产生了重要的影响.由于铵态氮肥在旱地中很容易经过硝化作用转变为硝态氮,其中一小部分为植物所吸收,而大量的硝态氮被淋失,或经反硝化作用进入大气,造成土壤氮素严重损失.自然界中一些植物的根系能够分泌抑制硝化作用的物质,被称为生物硝化抑制剂,因而可以显著提高土壤氮素利用率.本文阐述了有关生物硝化抑制剂的由来、分泌调节、作用机制及其应用潜力,并探讨了其在农业生产中氮素高效管理等方面的应用前景.

  17. 晚期渗滤液短程生物脱氮的实现%Achievement of Short-cut Biological Nitrogen Removal of Mature Landfill Leachate

    Institute of Scientific and Technical Information of China (English)

    彭永臻; 宋燕杰; 刘牡; 刘甜甜

    2012-01-01

    Stable short-cut nitrification was achieved through the selective inhibition of free ammonia (FA), free nitrous acid (FNA) on the nitrifying bacteria and a real-time control strategy which used pH, DO and ORP as parameters in an SBR reactor. The effects of C/N ratio and initial pH value on the short-cut biological nitrogen removal were studied. It is found that: when influent NH,+ - N concentration was 108-177. 3 mg/L, the nitrite accumulation rate was around 90%. The reasons for the favorable nitrite accumulation rate were both the inhibition of FA and FNA on the NOB and the real-time control strategy through detecting the "ammonia valley" and "nitrite knee" two feature points in pH and ORP profiles, respectively. The optimal C/N ratio was 3 when acetate was used as the carbon source. When the denitrification rate with respect to the concentration of mixed liquor suspended solids was 19. 8 mg o g-1 o h-1 NOx- - N, NH4+ - N, NO2- - N, NO3- - N, TN of the effluent were less than 6,2,1 and 30 mg/L, respectively. When initial pH value was 8. 5, the denitrification rate was maximum. However the differences of denitrification rate were small when pH was in the range of 7. 5~8. 5.%在SBR反应器中利用游离氨(free ammonia,FA)、游离亚硝酸(free nitrous acid,FNA)对NOB(nitrite oxidizing bacteria,NOB)选择性抑制并耦合实时控制策略处理晚期垃圾渗滤液,成功实现持久稳定的短程生物脱氮,并研究了不同碳氮比及初始pH值对短程生物脱氮的影响.结果表明:通过FA和FNA对NOB的选择性抑制,在线检测反应中pH、DO和ORP数值,利用出现的“氨谷”、“ORP平台”“亚硝酸盐膝”等特征点作为运行操作控制时间点,准确得知反应进程,及时开始下一步操作,获得稳定短程生物脱氮.进水NH4+—N浓度为108~177.3 mg/L(平均值为138.7 mg/L)时,亚硝积累率一直稳定达90%左右,乙酸钠为碳源时最佳C、N质量比为3,相对于混合液悬浮固体浓度的反

  18. Rapid and selective derivatizatin method for the nitrogen-sensitive detection of carboxylic acids in biological fluids prior to gas chromatographic analysis

    NARCIS (Netherlands)

    Lingeman, H.; Haan, H.B.P.; Hulshoff, A.

    1984-01-01

    A rapid and selective derivatization procedure is described for the pre-column labelling of carboxylic acids with a nitrogen-containing label. The carboxylic acid function is activated with 2-bromo-1-methylpyridinium iodide and the activated carboxylic acid function reacts with a primary or a second

  19. Nitrogen and Oxygen Isotopic Studies of the Marine Nitrogen Cycle

    Science.gov (United States)

    Casciotti, Karen L.

    2016-01-01

    The marine nitrogen cycle is a complex web of microbially mediated reactions that control the inventory, distribution, and speciation of nitrogen in the marine environment. Because nitrogen is a major nutrient that is required by all life, its availability can control biological productivity and ecosystem structure in both surface and deep-ocean communities. Stable isotopes of nitrogen and oxygen in nitrate and nitrite have provided new insights into the rates and distributions of marine nitrogen cycle processes, especially when analyzed in combination with numerical simulations of ocean circulation and biogeochemistry. This review highlights the insights gained from dual-isotope studies applied at regional to global scales and their incorporation into oceanic biogeochemical models. These studies represent significant new advances in the use of isotopic measurements to understand the modern nitrogen cycle, with implications for the study of past ocean productivity, oxygenation, and nutrient status.

  20. 不同DMPP添加水平对土壤有机氮素转化的影响%Influence of Different DMPP Addition Level on Organic Nitrogen Transformation in the Soil

    Institute of Scientific and Technical Information of China (English)

    殷建祯; 俞巧钢; 符建荣; 马军伟; 叶静; 唐秋萍

    2012-01-01

    In order to improve the efficiency of nitrogen utilization and decrease the nitrogen loss,the influence of DMPP(3,4-dimethypyrazole phosphate) addition on soil nitrogen transformation under the organic fertilizers system were studied.Influence of DMPP addition on soil nitrogen transformation and ammonium oxidation inhibiting with different concentration of DMPP under the organic fertilizers system were studied by aerial soil incubation method.The results showed that,the process of nitration was obviously restrained with DMPP addition under the organic fertilizers system.The optimum efficiency of DMPP appeared on the 14th day.Compared to the treatment without DMPP addition,the NH+4-N content was increased by 2~3 times,meanwhile,the NO-3-N content was reduced by 2~3 times in those treatments with DMPP addition.Effects of nitrification inhibitor with DMPP addition showed a decreasing tendency after 14 days.Effects of DMPP on the nitrification inhibitor were enhanced with the increasing level of DMPP amount,but the inhibitory effect was no longer greatly enhanced when DMPP increased to a certain level above 2%.The optimize amount of DMPP was 1% to 2% in the organic fertilizers application in the agriculture production,concerning about the nitrification inhibitor effect and DMPP application level in the soil.%研究单施有机肥模式下,3,4-二甲基吡唑磷酸盐(DMPP)对土壤有机氮素转化的影响,为土壤氮素高效利用和减少损失提供科学依据。采用土壤恒温培养试验,研究单施有机肥条件下不同DMPP添加水平对土壤中有机氮素转化及硝化抑制效应的影响。结果表明,单施有机肥条件下,DMPP可明显抑制土壤硝化反应的进程。培养期间DMPP最佳硝化抑制效果出现在14d,与不添加DMPP的处理相比,添加DMPP的处理铵态氮含量增加2~3倍,硝态氮含量减少2~3倍。14d后DMPP硝化抑制效果逐渐减弱。DMPP对硝化反应的抑制效果及有效抑制时间随

  1. Discovery of Evolutionary Divergence of Biological Nitrogen Fixation and Photosynthesis: Fine Tuning of Biogenesis of the NifH and the ChlL by a Peptidyl-Prolyl Cis/Trans Isomerase

    Directory of Open Access Journals (Sweden)

    Nara Gavini

    2011-01-01

    Full Text Available Problem statement: Despite the structural and functional similarities between the nitrogenase that performs biological nitrogen fixation reaction and the Dark Protochlorphyllide Oxidoreductase (DPOR that performs chlorophyll-biosynthesis, attempts to substitute nitrogenase-components with DPOR-components have hitherto failed. This investigation was undertaken to test if Chlamydomonas reinhardtii protochlorophyllide (Pchlide reductase (ChlL that shares some structural similarity with Nitrogenase Reductase (NifH could complement the functions of NifH in biological nitrogen fixation of Azotobacter vinelandii. Approach: Genetic complementation studies were performed to test if the chlL gene and its mutants cloned under transcriptional control of nifH promoter (nifHp in a broad-host range low copy plasmid pBG1380 could render a Nif+ phenotype to NifH-deficient A. vinelandii strains. Results: Expression of ChlL could render Nif+ phenotype to NifH-deficient A. vinelandii only in the absence of NifM, a nif-specific PPIase essential for biogenesis of NifH. The ChlL mutants Cys95Thr and Cys129Thr were unable to substitute for NifH. Thus, the conserved cysteine ligands of [4Fe-4S] cluster in ChlL are essential for successful substitution of NifH by ChlL. Since C-termini of NifH and ChlL demonstrated the least similarity and Pro258, a substrate for the PPIase activity of NifM, is located in the C-terminus of NifH, we posited that replacing the C-terminus of NifH with that of ChlL would render NifM-independence to NifH. The NifH-ChlL chimera could support the growth of NifH- and NifM-deficient A. vinelandii in nitrogen limiting conditions implying that it has acquired NifM-independence. Conclusion/Recommendations: Collectively, these observations suggest that NifM, an evolutionarily conserved nif-specific PPIase, could have contributed to the functional divergence of biological nitrogen fixation and photosynthesis during evolution by virtue of its ability to

  2. Elimination of micropollutants and transformation products from a wastewater treatment plant effluent through pilot scale ozonation followed by various activated carbon and biological filters.

    Science.gov (United States)

    Knopp, Gregor; Prasse, Carsten; Ternes, Thomas A; Cornel, Peter

    2016-09-01

    Conventional wastewater treatment plants are ineffective in removing a broad range of micropollutants, resulting in the release of these compounds into the aquatic environment, including natural drinking water resources. Ozonation is a suitable treatment process for micropollutant removal, although, currently, little is known about the formation, behavior, and removal of transformation products (TP) formed during ozonation. We investigated the elimination of 30 selected micropollutants (pharmaceuticals, X-ray contrast media, industrial chemicals, and TP) by biological treatment coupled with ozonation and, subsequently, in parallel with two biological filters (BF) or granular activated carbon (GAC) filters. The selected micropollutants were removed to very different extents during the conventional biological wastewater treatment process. Ozonation (specific ozone consumption: 0.87 ± 0.29 gO3 gDOC(-1), hydraulic retention time: 17 ± 3 min) eliminated a large number of the investigated micropollutants. Although 11 micropollutants could still be detected after ozonation, most of these were eliminated in subsequent GAC filtration at bed volumes (BV) of approximately 25,000 m(3) m(-3). In contrast, no additional removal of micropollutants was achieved in the BF. Ozonation of the analgesic tramadol led to the formation of tramadol-N-oxide that is effectively eliminated by GAC filters, but not by BF. For the antiviral drug acyclovir, the formation of carboxy-acyclovir was observed during activated sludge treatment, with an average concentration of 3.4 ± 1.4 μg L(-1) detected in effluent samples. Subsequent ozonation resulted in the complete elimination of carboxy-acyclovir and led to the formation of N-(4-carbamoyl-2-imino-5-oxo imidazolidin)-formamido-N-methoxyacetetic acid (COFA; average concentration: 2.6 ± 1.0 μg L(-1)). Neither the BF nor the GAC filters were able to remove COFA. These results highlight the importance of considering TP in the

  3. Effect of carbon sources on biological nitrogen and phosphorus removal in the municipal wastewater treatment system%碳源对污水处理系统脱氮除磷的影响

    Institute of Scientific and Technical Information of China (English)

    林雨倩; 赵军

    2014-01-01

    The performance of biological nutrient removal (BNR) processes is directly connected to the availability of carbon sources. This study introduces the metabolism mechanisms of carbon sources in each step of biological nitrogen and phosphorus removal processes, and the types and concentrations of carbon sources on the nitrogen and phosphorus removal are also discussed. It was revealed that the effective use of organic substrate including external and internal carbon sources could enhance the purifying performance of the system.%在污水强化生物脱氮除磷系统中,碳源种类及浓度对于处理系统去除效果的高效运行起到重要的作用。通过介绍生物脱氮及除磷各步骤碳源需求的机理,探讨碳源类型及碳源浓度对系统脱氮除磷效果的影响,同时对提高污水碳源浓度常用的手段即增加外碳源及内碳源方法进行分析。

  4. The role of topography in the transformation of spatiotemporal patterns by a large-scale, biologically realistic model of the rat dentate gyrus.

    Science.gov (United States)

    Yu, Gene J; Hendrickson, Phillip J; Robinson, Brian S; Song, Dong; Berger, Theodore W

    2013-01-01

    A large-scale, biologically realistic, computational model of the rat hippocampus is being constructed to study the input-output transformation that the hippocampus performs. In the initial implementation, the layer II entorhinal cortex neurons, which provide the major input to the hippocampus, and the granule cells of the dentate gyrus, which receive the majority of the input, are modeled. In a previous work, the topography, or the wiring diagram, connecting these two populations had been derived and implemented. This paper explores the consequences of two features of the topography, the distribution of the axons and the size of the neurons' axon terminal fields. The topography converts streams of independently generated random Poisson trains into structured spatiotemporal patterns through spatiotemporal convergence achievable by overlapping axon terminal fields. Increasing the axon terminal field lengths allowed input to converge over larger regions of space resulting in granule activation across a greater area but did not increase the total activity as a function of time as the number of targets per input remained constant. Additional simulations demonstrated that the total distribution of spikes in space depends not on the distribution of the presynaptic axons but the distribution of the postsynaptic population. Analyzing spike counts emphasizes the importance of the postsynaptic distribution, but it ignores the fact that each individual input may be carrying unique information. Therefore, a metric should be created that relates and tracks individual inputs as they are propagated and integrated through hippocampus.

  5. Efficiency of two nitrification inhibitors (dicyandiamide and 3, 4-dimethypyrazole phosphate) on soil nitrogen transformations and plant productivity: a meta-analysis

    Science.gov (United States)

    Yang, Ming; Fang, Yunting; Sun, Di; Shi, Yuanliang

    2016-02-01

    Dicyandiamide (DCD) and 3, 4-dimethypyrazole phosphate (DMPP) are often claimed to be efficient in regulating soil N transformations and influencing plant productivity, but the difference of their performances across field sites is less clear. Here we applied a meta-analysis approach to compare effectiveness of DCD and DMPP across field trials. Our results showed that DCD and DMPP were equally effective in altering soil inorganic N content, dissolve inorganic N (DIN) leaching and nitrous oxide (N2O) emissions. DCD was more effective than DMPP on increasing plant productivity. An increase of crop yield by DMPP was generally only observed in alkaline soil. The cost and benefit analysis (CBA) showed that applying fertilizer N with DCD produced additional revenues of $109.49 ha‑1 yr‑1 for maize farms, equivalent to 6.02% increase in grain revenues. In comparisons, DMPP application produced less monetary benefit of $15.67 ha‑1 yr‑1. Our findings showed that DCD had an advantage of bringing more net monetary benefit over DMPP. But this may be weakened by the higher toxicity of DCD than DMPP especially after continuous DCD application. Alternatively, an option related to net monetary benefit may be achieved through applying DMPP in alkaline soil and reducing the cost of purchasing DMPP products.

  6. The mineralization and transformation of both added organic nitrogen and native soil N in red soils from four different ecological conditions

    Institute of Scientific and Technical Information of China (English)

    YeQing-Fu; HeZhen-Li; 等

    1998-01-01

    The NH4+-N,microbial biomass-N,humus-N,and extractable orgainc N derived from the added 15N-labelled ryegrass and soil indigenous pool were measured separately with 15N tracing techniques.Based on the recovery of NH4+-15N and lost-15N(mainly as NH3),more than 30% of the added ryegrass 15N was mineralized in 15d.The amount of mineralized N increased with time up to 90d for all soils except for the upland soil in which it decreased slightly.The minearlization of ryegrass N and incorporation of ryegrass-15N into microbial biomass was greatest in upland soil.The transformation of ryegrass 15N into humus 15N occurred rapidly in 15d,with higher humus 15N occurring in the upland or tea-garden soil than the paddy and unarable soil.The addition of ryegrass caused additional mineralization of soil indigenous organic N and enhanced the turnover of both microbial biomass N and stable organic N in soils.

  7. Efficiency of two nitrification inhibitors (dicyandiamide and 3, 4-dimethypyrazole phosphate) on soil nitrogen transformations and plant productivity: a meta-analysis.

    Science.gov (United States)

    Yang, Ming; Fang, Yunting; Sun, Di; Shi, Yuanliang

    2016-02-23

    Dicyandiamide (DCD) and 3, 4-dimethypyrazole phosphate (DMPP) are often claimed to be efficient in regulating soil N transformations and influencing plant productivity, but the difference of their performances across field sites is less clear. Here we applied a meta-analysis approach to compare effectiveness of DCD and DMPP across field trials. Our results showed that DCD and DMPP were equally effective in altering soil inorganic N content, dissolve inorganic N (DIN) leaching and nitrous oxide (N2O) emissions. DCD was more effective than DMPP on increasing plant productivity. An increase of crop yield by DMPP was generally only observed in alkaline soil. The cost and benefit analysis (CBA) showed that applying fertilizer N with DCD produced additional revenues of $109.49 ha(-1) yr(-1) for maize farms, equivalent to 6.02% increase in grain revenues. In comparisons, DMPP application produced less monetary benefit of $15.67 ha(-1) yr(-1). Our findings showed that DCD had an advantage of bringing more net monetary benefit over DMPP. But this may be weakened by the higher toxicity of DCD than DMPP especially after continuous DCD application. Alternatively, an option related to net monetary benefit may be achieved through applying DMPP in alkaline soil and reducing the cost of purchasing DMPP products.

  8. Transformation and loss of nitrogen during composting of biogas slurry and sludge%沼渣与污泥混合高温堆肥效果及氮素控制

    Institute of Scientific and Technical Information of China (English)

    周俊; 杨玉婷; 谢欣欣; 雍晓雨; 刘奋武; 王舒雅; 张雪英; 郑涛

    2014-01-01

    以锯木屑为调理剂,以Mg( OH)2与H3 PO4的混合液为高温堆肥过程中的氮素抑制剂,研究沼渣与啤酒厂污泥混合堆肥效果。结果表明:混合物经好氧发酵处理后,均达到腐熟。添加氮素固定剂处理和对照处理的最高温度都可达65℃以上,在堆肥过程中添加氮素固定剂处理可提高堆体中有机物质的转化速率,对氮素的固定率达18%以上,添加固氮剂处理的堆肥结束后P元素增加了51%,堆肥品质得到了大幅度提高。堆肥过程中的物料的种子发芽指数不断提高,达到0�9;添加固氮剂的处理堆肥的种子发芽指数为1�0,明显高于对照。可见采用高温堆肥和氮素固定技术可有效地实现沼渣及啤酒厂污泥的混合资源化,该研究为后期沼渣和啤酒厂污泥堆肥的规模化应用提供了技术参数。%Aerobic composting of the mixture of biogas slurry and brewery sludge with sawdust as bulking agent was conducted in the absence and presence of nitrogen fixatives with an aim to inhibit nitrogen loss during composting,and the nitrogen fixatives was selected as the solution of Mg(OH)2⁃H3PO4�Results showed that both treatments were matured after 53 d�The highest temperature of all compost piles reached 65 ℃, and the fixatives could slightly enhance the transformation rate of organic matter�Specially, the nitrogen fixing rate was higher than 18% and total P content was increased by 51% in the treatment of applying Mg(OH)2⁃H3PO4 solution�The seed germination index of compost was 0�9,and that of the treatment of the fixatives addition was 1�0,obviously better than the control�Aerobic composting in the present of nitrogen fixatives is a suitable approach to treat biogas slurry and brewery sludge.

  9. Eliminació biològica de nitrogen via nitrit d'un corrent amb alta càrrega d'amoni Nitrite pathway biological nitrogen removal of a high strength ammonium wastewater /

    OpenAIRE

    Torà Suárez, Josep A.

    2012-01-01

    Descripció del recurs: el 01 setembre 2012 En aquesta tesi s'ha estudiat l'eliminació biològica de nitrogen en aigües residuals amb alta càrrega d'amoni. Aplicant certes condicions d'operació en un sistema de llots actius es pot aconseguir la nitrificació parcial o nitritació, que és l'oxidació de l'amoni a nitrit, evitant la conseqüent oxidació d'aquest nitrit a nitrat. Aquesta reducció en el procés de nitrificació aporta un seguit d'avantatges en front de la nitrificació convencional, ta...

  10. Constraining the role of iron in environmental nitrogen transformations. Dual stable isotope systematics of abiotic NO2- reduction by Fe(II) and its production of N2O

    Energy Technology Data Exchange (ETDEWEB)

    Johnston, David [Harvard Univ., Cambridge, MA (United States); Wankel, Scott David [Woods Hole Oceanographic Inst., MA (United States); Buchwald, Carolyn [Woods Hole Oceanographic Inst., MA (United States); Hansel, Colleen [Woods Hole Oceanographic Inst., MA (United States)

    2015-09-16

    Redox reactions involving nitrogen and iron have been shown to have important implications for mobilization of priority contaminants. Thus, an understanding of the linkages between their biogeochemical cycling is critical for predicting subsurface mobilization of radionuclides such as uranium. Despite mounting evidence for biogeochemical interactions between iron and nitrogen, our understanding of their environmental importance remains limited. Here we present an investigation of abiotic nitrite (NO2-) reduction by Fe(II) or ‘chemodenitrification,’ and its relevance to the production of nitrous oxide (N2O), specifically focusing on dual (N and O) isotope systematics under a variety of environmentally relevant conditions. We observe a range of kinetic isotope effects that are regulated by reaction rates, with faster rates at higher pH (~8), higher concentrations of Fe(II) and in the presence of mineral surfaces. A clear non-linear relationship between rate constant and kinetic isotope effects of NO2- reduction was evident (with larger isotope effects at slower rates) and is interpreted as reflecting the dynamics of Fe(II)-N reaction intermediates. N and O isotopic composition of product N2O also suggests a complex network of parallel and/or competing pathways. Our findings suggest that NO2- reduction by Fe(II) may represent an important abiotic source of environmental N2O, especially in iron-rich environments experiencing dynamic redox variations. This study provides a multi-compound, multi-isotope framework for evaluating the environmental occurrence of abiotic NO2- reduction and N2O formation, helping future studies constrain the relative roles of abiotic and biological N2O production pathways.

  11. Do foliar endophytic bacteria fix nitrogen?

    Science.gov (United States)

    Kueppers, L. M.; Moyes, A. B.; Frank, C.; Pett-Ridge, J.; Carper, D.; Vandehey, N.; O'Neil, J.; Dekas, A.

    2015-12-01

    Endophytic microorganisms - bacteria and fungi that live inside healthy plant tissue - are a relatively unexplored source of functional diversity in natural ecosystems. Prior to modern sequencing technology, detecting uncultured endophytic bacteria and assessing their putative functions was challenging. However, recent work has revealed a remarkable diversity of as yet non-culturable endophytic taxa and is beginning to identify functional roles within plant microbiomes. We recently examined bacterial communities in the foliage of a long-lived, high-elevation conifer species, limber pine (Pinus flexilis), and discovered a community strongly dominated by acetic acid bacteria (Acetobacteraceae), with several taxa closely related to known nitrogen fixers. Given limber pine's status as a pioneer species that is able to grow in low fertility soils, we hypothesized that this bacterial community has a potential functional role in fixing atmospheric nitrogen, providing a source of this limiting nutrient to the host tree. We used the radioisotope 13N2 to confirm that N2 rapidly diffuses into pine needles, where it could potentially be fixed. With an acetylene reduction assay we confirmed nitrogenase enzyme activity inside excised twigs 4 times over a growing season, and estimate potential rates of N2 fixation at 0.1 nmol N2 g needle-1 hr-1. Scaled to the stand level, this N input could be on the order of ~20 mg N m-2 d-1 over a growing season. While these rates are low, the long lifespan of individual trees (~1000 years) makes them biologically meaningful. Still, measured rates of acetylene reduction and bulk 15N2 incorporation are quite variable in space and time. Much work remains to better characterize the plant-microbial interactions in this system, including the rates of nitrogen fixation and their variability over the growing season, across edaphic conditions, among host species, and through plant development; and to determine which community members are responsible

  12. Synthesis, biological evaluation, and computational studies of Tri- and tetracyclic nitrogen-bridgehead compounds as potent dual-acting AChE inhibitors and hH3 receptor antagonists.

    Science.gov (United States)

    Darras, Fouad H; Pockes, Steffen; Huang, Guozheng; Wehle, Sarah; Strasser, Andrea; Wittmann, Hans-Joachim; Nimczick, Martin; Sotriffer, Christoph A; Decker, Michael

    2014-03-19

    Combination of AChE inhibiting and histamine H3 receptor antagonizing properties in a single molecule might show synergistic effects to improve cognitive deficits in Alzheimer's disease, since both pharmacological actions are able to enhance cholinergic neurotransmission in the cortex. However, whereas AChE inhibitors prevent hydrolysis of acetylcholine also peripherally, histamine H3 antagonists will raise acetylcholine levels mostly in the brain due to predominant occurrence of the receptor in the central nervous system. In this work, we designed and synthesized two novel classes of tri- and tetracyclic nitrogen-bridgehead compounds acting as dual AChE inhibitors and histamine H3 antagonists by combining the nitrogen-bridgehead moiety of novel AChE inhibitors with a second N-basic fragment based on the piperidinylpropoxy pharmacophore with different spacer lengths. Intensive structure-activity relationships (SARs) with regard to both biological targets led to compound 41 which showed balanced affinities as hAChE inhibitor with IC50 = 33.9 nM, and hH3R antagonism with Ki = 76.2 nM with greater than 200-fold selectivity over the other histamine receptor subtypes. Molecular docking studies were performed to explain the potent AChE inhibition of the target compounds and molecular dynamics studies to explain high affinity at the hH3R.

  13. 氮肥增效剂对海南砖红壤土壤氮转化影响的研究%Effects of nitrogenous fertilizer synergist on soil N transformation derived from granite in Hainan

    Institute of Scientific and Technical Information of China (English)

    霍敏霞; 邹杰; 黄芳英; 孟磊

    2012-01-01

    抑制剂施用能显著降低尿素及含脲肥料施用带来的环境问题.通过室内培养试验,对硝化抑制剂双氰胺(DCD)和氯唑灵(Dwell)以及长效复混肥添加剂(NAM)对海南花岗岩母质土壤尿素氮转化的影响进行研究.结果表明,NAM和DCD可提高土壤NH4+-N含量,抑制硝化作用,可应用到海南地区以尿素作为氮源的肥料中,其推荐用量分别为施入纯氮量的0.8%和3.5%.但由于NAM和DCD能在较长一段时间内显著提高土壤酸碱度,有导致土壤氨挥发加大及NO2-积累的风险,建议在施肥时不要集中大量施用.%Environmental problems were significantly decreased by application of urea and urea contained fertilizer which added nitrification inhibitor and urease inhibitor. A laboratory aerobic incubation experiment was conducted to explore the effect of two kinds nitrification inhibitor (DCD and Dwell) and the long-acting fertilizer additive (NAM) on N transformations in soil derived from granite in Hainan island. The results showed that NAM and DCD had both inhibiting nitrification and increasing NH4+ -N content. NAM and DCD could be as additive agents for the fertilizers including urea in Hainan area. The optimum ration was about 0. 8% and 3. 5% of pure nitrogen levels, respectively. NAM and DCD could both significantly increase soil pH for a long period, and this maybe increased the risks of the ammonia volatilization and nitrite-nitrogen accumulation. Broadcast combination high frequency with low amount was advised when fertilizers were applied.

  14. Effects of nitrogen deposition and soil fertility on cover and physiology of Cladonia foliacea (Huds.) Willd., a lichen of biological soil crusts from Mediterranean Spain

    Energy Technology Data Exchange (ETDEWEB)

    Ochoa-Hueso, Raul, E-mail: raul.ochoa@ccma.csic.e [Instituto de Recursos Naturales, Centro de Ciencias Medioambientales, Consejo Superior de Investigaciones Cientificas, C/Serrano 115 bis, 28006 Madrid (Spain); Manrique, Esteban [Instituto de Recursos Naturales, Centro de Ciencias Medioambientales, Consejo Superior de Investigaciones Cientificas, C/Serrano 115 bis, 28006 Madrid (Spain)

    2011-02-15

    We are fertilizing a thicket with 0, 10, 20 and 50 kg nitrogen (N) ha{sup -1} yr{sup -1} in central Spain. Here we report changes in cover, pigments, pigment ratios and FvFm of the N-tolerant, terricolous, lichen Cladonia foliacea after 1-2 y adding N in order to study its potential as biomarker of atmospheric pollution. Cover tended to increase. Pigments increased with fertilization independently of the dose supplied but only significantly with soil nitrate as covariate. {beta}-carotene/chlorophylls increased with 20-50 kg N ha{sup -1} yr{sup -1} (over the background) and neoxanthin/chlorophylls also increased with N. (Neoxanthin+lutein)/carotene decreased with N when nitrate and pH seasonalities were used as covariates. FvFm showed a critical load above 40 kg N ha{sup -1} yr{sup -1}. Water-stress, iron and copper also explained variables of lichen physiology. We conclude that this tolerant lichen could be used as biomarker and that responses to N are complex in heterogeneous Mediterranean-type landscapes. - Research highlights: We are providing evidence of the potential use of the crust-forming lichen Cladonia foliacea as biomarker of atmospheric pollution in Mediterranean ecosystems of Europe, which are understudied with regard to this topic. Pigment concentration increased with N addition and FvFm, used as indicator of physiological status, showed a critical load above 20 kg N ha{sup -1} y{sup -1}. Soil nitrate and pH were important in modulating responses to simulated N pollution and other soil parameters (micro-nutrients, water content...) also explained variables of lichen physiology. We conclude that Cladonia foliacea could be used as biomarker and that responses to N are complex in heterogeneous Mediterranean-type landscapes. - Nitrogen deposition and soil variables affect the physiology of terrestrial Mediterranean lichens.

  15. 间歇曝气和连续曝气对生物脱氮除磷效果的比较%Biological Nitrogen and Phosphorus Removal Efficiency by Intermittent Aeration and Continues Aeration Compared

    Institute of Scientific and Technical Information of China (English)

    潘敏; 黄晓鸣

    2015-01-01

    Biological nitrogen and phosphorus removal was investigated by an intermittently aerated sequencing batch reactor IASBR and a sequencing batch reactor SBR . The removal efficiencies of ammonium⁃nitrogen NH4+⁃N were 99�30% and 98�73% respectively in IASBR and SBR in steady operation while phosphorus PO3-4 ⁃P removal efficiencies were 97�02% and 67�47% in IASBR and SBR respectively. The intermittent aeration pattern has better effect for biological phosphorus removal. Effluent NH4+⁃N PO3-4 ⁃P and COD concentrations in the IASBR meets ChinaⅠEmission Standards.%采用序批式生物反应器SBR系统,考察反应阶段的间歇曝气和连续曝气对模拟生活废水中氮和磷的去除效果。研究表明: IASBR和SBR对NH4+-N的去除率分别为99�30%和98�73%;对PO3-4-P的去除率分别为97�02%和67�47%。间歇曝气SBR对氨氮和磷酸根的去除率比连续曝气SBR高,有利于实现强化生物脱磷过程。间歇曝气SBR出水中氮、磷和COD浓度均达到了我国城镇污水处理厂污染物排放标准(GB 18918—2002)一级标准。

  16. Model Transformations? Transformation Models!

    NARCIS (Netherlands)

    Bézivin, J.; Büttner, F.; Gogolla, M.; Jouault, F.; Kurtev, I.; Lindow, A.

    2006-01-01

    Much of the current work on model transformations seems essentially operational and executable in nature. Executable descriptions are necessary from the point of view of implementation. But from a conceptual point of view, transformations can also be viewed as descriptive models by stating only the

  17. Ammonia nitrogen desorption from sanitary landfill leachate in filling towers

    OpenAIRE

    Leite,Valderi D.; Barros,Aldre J. M.; Lopes,Wilton S.; Sousa,José T. de

    2014-01-01

    Sanitary landfill leachates present high concentrations of carbonaceous and nitrogenous materials. The crucial point is that carbonaceous materials are of difficult biodegradation, what compromises the performance of biological treatment processes, while nitrogenous materials, such as ammonia nitrogen, probably preclude the use of biological treatments. Therefore, the aim of this work was to study the desorption process of ammonia nitrogen from sanitary landfill leachate in filling towers. De...

  18. Hydrolytic Amino Acids Employed as a Novel Organic Nitrogen Source for the Preparation of PGPF-Containing Bio-Organic Fertilizer for Plant Growth Promotion and Characterization of Substance Transformation during BOF Production.

    Science.gov (United States)

    Zhang, Fengge; Meng, Xiaohui; Feng, Chenglong; Ran, Wei; Yu, Guanghui; Zhang, Yingjun; Shen, Qirong

    2016-01-01

    Opportunity costs seriously limit the large-scale production of bio-organic fertilizers (BOFs) both in China and internationally. This study addresses the utilization of amino acids resulting from the acidic hydrolysis of pig corpses as organic nitrogen sources to increase the density of TrichodermaharzianumT-E5 (a typical plant growth-promoting fungi, PGPF). This results in a novel, economical, highly efficient and environmentally friendly BOF product. Fluorescence excitation-emission matrix (EEM) spectroscopy combined with fluorescence regional integration (FRI) was employed to monitor compost maturity levels, while pot experiments were utilized to test the effects of this novel BOF on plant growth. An optimization experiment, based on response surface methodologies (RSMs), showed that a maximum T-E5 population (3.72 × 108 ITS copies g-1) was obtained from a mixture of 65.17% cattle manure compost (W/W), 19.33% maggot manure (W/W), 15.50% (V/W)hydrolytic amino acid solution and 4.69% (V/W) inoculum at 28.7°C after a 14 day secondary solid fermentation. Spectroscopy analysis revealed that the compost transformation process involved the degradation of protein-like substances and the formation of fulvic-like and humic-like substances. FRI parameters (PI, n, PII, n, PIII, n and PV, n) were used to characterize the degree of compost maturity. The BOF resulted in significantly higher increased chlorophyll content, shoot length, and shoot and root dry weights of three vegetables (cucumber, tomato and pepper) by 9.9%~22.4%, 22.9%~58.5%, 31.0%~84.9%, and 24.2%~34.1%, respectively. In summary, this study presents an operational means of increasing PGPF T-E5 populations in BOF to promote plant growth with a concomitant reduction in production cost. In addition, a BOF compost maturity assessment using fluorescence EEM spectroscopy and FRI ensured its safe field application.

  19. Hydrolytic Amino Acids Employed as a Novel Organic Nitrogen Source for the Preparation of PGPF-Containing Bio-Organic Fertilizer for Plant Growth Promotion and Characterization of Substance Transformation during BOF Production.

    Directory of Open Access Journals (Sweden)

    Fengge Zhang

    Full Text Available Opportunity costs seriously limit the large-scale production of bio-organic fertilizers (BOFs both in China and internationally. This study addresses the utilization of amino acids resulting from the acidic hydrolysis of pig corpses as organic nitrogen sources to increase the density of TrichodermaharzianumT-E5 (a typical plant growth-promoting fungi, PGPF. This results in a novel, economical, highly efficient and environmentally friendly BOF product. Fluorescence excitation-emission matrix (EEM spectroscopy combined with fluorescence regional integration (FRI was employed to monitor compost maturity levels, while pot experiments were utilized to test the effects of this novel BOF on plant growth. An optimization experiment, based on response surface methodologies (RSMs, showed that a maximum T-E5 population (3.72 × 108 ITS copies g-1 was obtained from a mixture of 65.17% cattle manure compost (W/W, 19.33% maggot manure (W/W, 15.50% (V/Whydrolytic amino acid solution and 4.69% (V/W inoculum at 28.7°C after a 14 day secondary solid fermentation. Spectroscopy analysis revealed that the compost transformation process involved the degradation of protein-like substances and the formation of fulvic-like and humic-like substances. FRI parameters (PI, n, PII, n, PIII, n and PV, n were used to characterize the degree of compost maturity. The BOF resulted in significantly higher increased chlorophyll content, shoot length, and shoot and root dry weights of three vegetables (cucumber, tomato and pepper by 9.9%~22.4%, 22.9%~58.5%, 31.0%~84.9%, and 24.2%~34.1%, respectively. In summary, this study presents an operational means of increasing PGPF T-E5 populations in BOF to promote plant growth with a concomitant reduction in production cost. In addition, a BOF compost maturity assessment using fluorescence EEM spectroscopy and FRI ensured its safe field application.

  20. 堆肥过程中碳、氮转化与温室气体排放研究进展%Progress on Carbon-and Nitrogen-transformation and Greenhouse Gas Emission in Composting

    Institute of Scientific and Technical Information of China (English)

    高凌飞; 王义祥; 叶菁; 翁伯琦

    2014-01-01

    Agriculture and animal husbandry have a direct impact on people′s livelihood .Waste recycling is seen as a prudent measure to ensure an economical ,as well as environmentally friendly ,operation . In practice ,composting can not only fulfill such mission ,but also prevent pollution and improve safety . It has been an effective means in handling organic solid wastes worldwide for ages . By reviewing published literature and analyzing available data , this paper summarizes the dynamic fate and effects of the greenhouse gas emission , the rules of carbon- and nitrogen-transformation ,as well as the microbial interactions during composting . Suggestions for future research are presented .%农牧业生产事关民生,资源化处理农牧业废弃物是保证种养结合及养分循环必不可少的重要环节。实践表明,利用堆肥技术处理农牧废弃物不仅环保与安全,而且符合循环经济的要求,同时它也是目前国内外处理有机固体废弃物的主要措施。本文在分析和查阅大量文献基础上,对堆肥过程中温室气体排放动态及影响因素,有机肥堆制中碳、氮转化规律及其与微生物间的作用进行综述。分析影响堆肥碳、氮转化因子与相应的研究进展,指出研究中存在的问题并提出今后的研究方向。

  1. NITROGEN FIXATION OF BIOLOGICAL SOIL CRUSTS ON COPPER MINING TAILINGS AND ITS INFLUENCE FACTORS%铜尾矿生物结皮的生物固氮及其影响因素研究

    Institute of Scientific and Technical Information of China (English)

    宋勇生; 龚亚龙; 廖斌; 刘蔚秋

    2011-01-01

    The dumping site for copper mining tailings at Yangshanchong at Tongling city ( Anhui Province) has been deserted for 20-years. The area is characterized by extremely high concentrations of heavy metals, poverty of nutrients, easy acidification and severe desertification. Biological soil crusts ( BSCs) , extensively existing on tailings is a major early stage of the ecological succession of the tailing ecosystem. The method of in situ acetylene reduction was applied to explore characteristics of biological nitrogen-fixation of algae, algae-moss and moss crusts on tailings. It was found that biological crusts significantly increased total nitrogen and lower Cu content in the tailings, and the nitrogen-fixing capability of the crusts varied sharply from type to type. Among the three types, the algae-moss type of crust was the highest in N2 fixation rates, ranging between 1. 32 -8.78 kg hm ~ a , and followed by the algae type and the moss type, ranging between 4. 36 ~ 30. 39 kg hm-2a-1 and between 0 ~16. 34 kg hm -2 a-1, respectively, and followed a decreasing order of algae-moss, moss, and algae BSCs. N2 fixation capacity of the BSCs varied with the season, too showing a decrease order of summer, spring, fall and winter. Besides, a negative line relationship was observed of the capacity with soil bulk density, NO3--N, and total Cu concentration and a positive one with pH, NH4+-N, and water soluble organic carbon. On the whole, BSCs significantly enhanced total nitrogen content, and decrease total Cu concentration in tailings. The anomalous wet conditions experienced during the year of the study may have increased the temporal availability of soil mineral N and decreased N fixation rates. However, the presence of N fixation activity in all crusts analyzed their ability to survive at high Cu concentration, which may contribute to ecosystem resilience and recovery in areas under severe heavy metal stress.%在铜尾矿生态系统自然恢复过程中,生物结皮广

  2. 不同浓度DMPP和DCD对石灰性土壤中氮素转化的影响%Effects of Different Application Rates of DMPP and DCD on Nitrogen Transformation in Calcareous Soil

    Institute of Scientific and Technical Information of China (English)

    石美; 梁东丽; 满楠; 郭璐; 赵文龙; 王朝辉

    2012-01-01

    [目的]研究不同浓度硝化抑制剂3,4-二甲基吡唑磷酸(DMPP)和双氰胺(DCD)对石灰性土壤中氮素转化的影响,筛选出适宜石灰性土壤施用的DMPP和DCD最佳浓度,为其进一步在生产实践中的施用提供参考.[方法]采用室内培养的试验方法,在相同培养条件(土壤水分含量为田间持水量(WHC)的60%,温度为25℃)下,通过测定不同浓度DMPP(含氮量的0.5%、1%、2.5%和5%)和DCD(含氮量的2.5%、5%、10%和15%)处理土壤中各种形态氮素含量,评价不同浓度DMPP和DCD的抑制效果.[结果]施加不同浓度DMPP和DCD的土壤铵态氮含量均显著高于CK,而硝态氮和亚硝态氮含量显著低于CK.石灰性土壤中施用DMPP和DCD均能显著降低土壤的氨氧化速率,土壤铵态氮的半衰期从CK处理的3.6d分别增加到14.1-17.1 d和13.1-26.8 d.不同浓度的DMPP间氨氧化速率差异不显著;而DCD处理的氨氧化速率随其浓度的增加而下降,亦即土壤铵态氮浓度的半衰期随施用浓度的增加而显著增加.除CK外,各处理氨氧化速率常数k相比,以2.5%DCD最小,15%DCD最大;DMPP与DCD相比较,除DCD最低浓度处理外(2.5%),所有DCD处理的氨氧化速率均大于DMPP.[结论]硝化抑制剂DMPP和DCD均能显著抑制铵态氮向硝态氮的氧化进程,DMPP各浓度处理抑制效果差异不显著,DCD各浓度处理间差异显著,5%DCD与DMPP各浓度处理间无显著差异.因此,建议DCD的施用量为含氮量5%,而DMPP的施用量为含氮量的0.5%.%[Objective] A simulating experiment was carried out to study the effects of different concentrations of DMPP and DCD on nitrogen transformation in calcareous soil, and the best application rate was screened to provide references for agricultural practice. [Method] In the same incubation condition (soil moisture: 60% of water hold capacity, 25℃), the effects of different concentrations of DMPP (0.5%, 1%, 2.5% and 5% of applied pure N) and

  3. Elucidating the Potential of Native Rhizobial Isolates to Improve Biological Nitrogen Fixation and Growth of Common Bean and Soybean in Smallholder Farming Systems of Kenya

    Directory of Open Access Journals (Sweden)

    Ernest Wandera Ouma

    2016-01-01

    Full Text Available Identification of effective indigenous rhizobia isolates would lead to development of efficient and affordable rhizobia inoculants. These can promote nitrogen fixation in smallholder farming systems of Kenya. To realize this purpose, two experiments were conducted under greenhouse conditions using two common bean cultivars; Mwezi moja (bush type and Mwitemania (climbing type along with soybean cultivar SB 8. In the first experiment, the common bean cultivars were treated with rhizobia inoculants including a consortium of native isolates, commercial isolate (CIAT 899, a mixture of native isolates and CIAT 899, and a control with no inoculation. After 30 days, the crop was assessed for nodulation, shoot and root dry weights, and morphological features. In the second experiment, soybean was inoculated with a consortium of native isolates, commercial inoculant (USDA 110, and a mixture of commercial and native isolates. Remarkably, the native isolates significantly (p<0.001 increased nodulation and shoot dry weight across the two common bean varieties compared to the commercial inoculant, CIAT 899. Mixing of the native rhizobia species and commercial inoculant did not show any further increase in nodulation and shoot performance in both crops. Further field studies will ascertain the effectiveness and efficiency of the tested indigenous isolates.

  4. Effects of dietary pea protein concentrate on growth performance, biological parameters, body composition and total ammonia-nitrogen excretion of meagre (Argyrosomus regius

    Directory of Open Access Journals (Sweden)

    Derya Güroy

    2017-03-01

    Full Text Available Using of alternative plant/animal based (except fish meal raw materials is one of the most important application for decreasing feed cost in finfish feeds. Meagre which is demanded from many countries because of its efficient meat quality and flovur and showed rapid growth under culture conditions is a potential species. A nutrition trial with meagre, Argyrosomus regius was undertaken to evaluate the effect of replacing dietary fishmeal (FM protein with pea protein concentrate (PPC. A diet with FM as the main protein source was used for the control diet (FM. Four experimental diets were formulated to progressively replace 15% (PPC15, 30% (PPC30, 45% (PPC45 and 60% (PPC60 of FM protein. The study was carried out in 450-L fiberglass tanks connected to a closed recirculation system. Eighteen fish per tank were randomly distributed into 15 tanks with three replicates. The diets were tested in triplicate for 12 weeks. The specific growth rate (SGR of fish fed diet PPC15 were not significantly different compared to fish fed the FM diet (P>0.05. Meagre fed FM, PPC15 and PPC30 had significantly lower FCR compared with fish fed PPC45 and PPC60 (P<0.05. Total ammonia-nitrogen (TAN excretion increased with elevated dietary PPC inclusion. In conclusion, using 15% of pea protein concentrate in meagre feeds has been recommended.

  5. Kinetics of Nitrogen Indiffusion in Czochralski Silicon Annealed in Nitrogen Ambient

    Institute of Scientific and Technical Information of China (English)

    LI Ming; MA Xiang-Yang; YANG De-Ren

    2008-01-01

    By means of low-temperature(10K)Fourier transform infrared absorption spectroscopy,the kinetics of nitrogen indiffusion in Czochralski(CZ)silicon annealed 8t 1150-1250°C in nitrogen ambient is investigated.Moreover,the nitrogen diffusivities in CZ silicon at elevated temperatures deduced herein are in good agreement with those previously obtained in float-zone silicon,thus leading to the conclusion that the nitrogen indiffusion in CZ silicon at elevated temperatures is via nitrogen pairs.

  6. Synthesis, characterization and biological relevance of some metal (II) complexes with oxygen, nitrogen and oxygen (ONO) donor Schiff base ligand derived from thiazole and 2-hydroxy-1-naphthaldehyde

    Science.gov (United States)

    Nagesh, G. Y.; Mruthyunjayaswamy, B. H. M.

    2015-04-01

    The novel Schiff base ligand 2-((2-hydroxynaphthalen-1-yl)methylene)-N-(4-phenylthiazol-2-yl)hydrazinecarboxamide (L) obtained by the condensation of N-(4-phenylthiazol-2-yl)hydrazinecarboxamide with 2-hydroxy-1-naphthaldehyde and its newly synthesized Cu(II), Co(II), Ni(II), Zn(II) and Cd(II) complexes have been characterized by microanalysis, molar conductance, IR, 1H NMR, ESI-mass, UV-Visible, TGA/DTA, ESR and powder X-ray diffraction data to explicate their structures. The IR results confirmed the tridentate binding of the ligand involving oxygen atom of amide carbonyl, azomethine nitrogen and naphthol oxygen. 1H NMR spectral data of the ligand (L) and its Zn(II) complex agreed well with the proposed structures. Thermogravimetric studies for Cu(II) and Ni(II) complexes indicated the presence of coordinated water molecules and the final product is the metal oxide. In order to appraise the effect of antimicrobial activity of metal ions upon chelation, the newly synthesized ligand and its metal complexes were screened for their antimicrobial activity by minimum inhibitory concentration (MIC) method. The DNA cleavage activities were studied using plasmid DNA pBR322 (Bangal re Genei, Bengaluru, Cat. No 105850) as a target molecule by agarose gel electrophoresis method. The brine shrimp bioassay was also carried out to study the in vitro cytotoxicity properties against Artemia salina. Furthermore, the antioxidant activity were determined in vitro by reduction of 1,1-diphenyl-2-picryl hydrazyl (DPPH). The ligand exhibited better in vitro-antioxidant activity than its metal complexes.

  7. A study on transformation of main pollutants along the wastewater flow in biological aerated filter%海水曝气生物滤器污染物沿程转化规律的研究

    Institute of Scientific and Technical Information of China (English)

    张延青; 陈江萍; 沈加正; 侯沙沙; 刘杨; 刘鹰

    2011-01-01

    The performances of biological aerated filter (BAF) with hollow bamboo balls as filter media for wastewater treatment in marine aquaculture was investigated. The wastewater was conditioned at pH ranging from 7.8-8.0, DO ranging from 2.8~5.8mg/L, air-to-water ratio at 3, hydraulic load of 0.58m3/(m3h), TAN load of 0.35~0.46g/(m3·h), and organic load of 1.58g/(m3h). Transformation of organic substances and ammonia nitrogen along the water flow were evaluated to determine the spatial distribution characteristics of pollutants. Results showed that most CODMn was removed between 0-10cm height, with 49.12% CODmn removed and 34.88% soluble CODMn removed in this range, meanwhile most TAN removed between 0-30cm height, with 18% TAN removed at 10cm and 55% removed at 30cm. The biomass and microbial activity decreased from the bottom of the filter to the top. In conclusion, pollutants were mainly removed between the height of 0~30cm, and the left section of the filter always acted as a buffer to remove pollutants remained in the wastewater, in case of sudden waste load or hydraulic impact.%以竹制空心生化球填料生物滤器处理海水养殖废水为对象,在水力负荷为0.58m3/[m3(填料)·h]、氨氮负荷为(0.35~046)g/[m3(填料)·h]、有机负荷约为11.58g/[m3(填料)·h]、气水比3∶1、pH值为7.8~8.0、DO浓度2.8~5.8mg/L的条件下,考察了有机物和总氨氮(TAN)的沿程转化规律,分析了污染物的空间分布特性.结果表明:在给定的运行条件下,CODMn的主要去除区间在滤器的0~10cm高度,其中CODMn和溶解性CODMn在此处的去除率分别为49.12%和34.88%;TAN的主要去除区间为0~30cm,其中10cm处TAN的去除率为18%,30cm处为55%;生物量和生物活性由下向上呈递减的分布趋势;生物滤器污染物的主要去除区间为0~30cn,受到水质、水量冲击时,较高层的填料(30~60cm)起到了缓冲作用,将下层生物膜未能降解的污染物去除.

  8. SOIL CONTAMINATION BY NITROGEN COMPOUNDS DURING ORGANIC FUEL COMBUSTION

    Directory of Open Access Journals (Sweden)

    V. P. Bubnov

    2010-01-01

    Full Text Available The paper considers a transition mechanism of flue gas nitrogen oxides being formed due to organic fuel combustion from atmosphere into soil. Mechanisms of nitrogen compound origination and transformation in atmosphere and their transition into soil have been presented in the paper. The paper recommends a generalized equation for mathematical description of nitrogen migration into soil. 

  9. Effect of Long-Lasting Slow-Release Diammonium Phosphate on Transformation of Nitrogen and Phosphorus in Soil and Yield of Spring Corn%长效缓释磷酸二铵对土壤氮、磷转化及春玉米产量的影响

    Institute of Scientific and Technical Information of China (English)

    李相辅; 钱大明; 杨志阁

    2012-01-01

    With a view to verification of the effect of long-lasting slow-release diammonium phosphate on the transformation of nitrogen and phosphorus in soil and yield of spring corn, experiments are carried out respectively on the effect of transformation of nitrate nitrogen in soil, N tracer (pot culture) , root pH value of spring wheat on readily available phosphorus in soil, and yield of spring corn. The results show that the addition of 0. 6% ~0. 9% mass fraction of combined nitrogen control and phosphorus promotion inhibitor ( HLS ) to conventional diammonium phosphate will effectively increase nitrogen and phosphorus availability, raise crop yield under similar climate conditions, inhibit nitrifying bacteria, and reduce nitrogen loss by 38.7% .%为探明长效缓释磷酸二铵对土壤中氮、磷的转化及春玉米产量的影响效果,分别进行了土壤硝态氮转化影响试验、15N示踪试验(盆栽)、春小麦根际pH对土壤速效磷的影响试验及春玉米产量影响试验.结果表明:在常规磷酸二铵中添加质量分数0.6%~0.9%的组合控氮促磷抑制剂(HLS)可有效提高氮和磷的利用率,在气候条件相同的情况下可提高作物产量,同时对硝化细菌有抑制作用,可减少氮损失38.7%.

  10. Retrieving canopy leaf total nitrogen content of winter wheat by continuous wavelet transform%小波法反演条锈病胁迫下冬小麦冠层叶片全氮含量

    Institute of Scientific and Technical Information of China (English)

    何汝艳; 乔小军; 蒋金豹; 郭会敏

    2015-01-01

    The aim of this paper is to monitor the nitrogen nutrition status of winter wheat under stripe rust stress by hyperspectral remote sensing. The experiment was carried out at Beijing Xiaotangshan Precision Agriculture Experimental Base, China (40°10.6′N, 116°16.3′E). The cultivar of winter wheat was Jingdong 8 which was very susceptible to stripe rust. Canopy spectral reflectance data of winter wheat was collected by an ASD Fieldspec FR spectroradiometer and the disease index (DI) was measured through counting the number of wheat leaf under stripe rust stress artificially in the field. Leaf total nitrogen (LTN) content of winter wheat used to calculate DI was measured in the laboratory. The relationship between DI of stripe rust and LTN content of winter wheat was analyzed. The canopy spectra were processed by the method of continuous wavelet transform (CWT) on 10 scales, therefore, a series of wavelet coefficients were obtained in this way. The correlation coefficients between wavelet coefficients and LTN content were calculated, and then, the wavelet coefficients, which had strong correlation with LTN content, were chosen. Several hyperspectral indices were also selected according to previous research results, namely SR (simple ratio index), PRI (photochemical reflectance index), NDVI (normalized difference vegetation index), OSAVI (optimized soil-adjusted vegetation index), SIPI (Structure insensitive pigment index), LIC1 (lichtenthaler index 1), LIC2 (lichtenthaler index 2), LIC3 (lichtenthaler index 3), TVI (triangular vegetation index) and MTVI2 (modified triangular vegetation index 2), which had high correlations with LTN content. Both wavelet coefficients and hyperspectral indices were used as independent variables of models to retrieve LTN content of winter wheat, and support vector machine (SVM) regression method was used to establish the estimation models. The above estimation models of different types of variables were made a comparison. Cross

  11. Experiment of the nitrogen transformation and transportation in controlled pipe-drainage cotton field%暗管控制排水棉田NO3--N和NH4+-N运移转化试验

    Institute of Scientific and Technical Information of China (English)

    袁念念; 黄介生; 谢华; 黄志强

    2011-01-01

    A filed contrastive experiment project was set up at Drainage and Irrigation Experimental Station, Jingzhou Yajiao to study how controlled pipe-drainage influence the N transformation and transportation. The depth of outlet was fixed through the whole growth period in 2008 and adjusted according to different stages in 2009. The results showed that nitrate concentration in the vertical soil profile decreased with the depth increase. Ammonia concentration had no obvious variation with depth in 2008 and was higher in 20, 40 cm layers than that in 60, 80 cm layers. Nitrate concentration was higher in surface and 20 cm layers in controlled treatments. Ammonia concentration was higher in the same layers in controlled treatments than that in conditional treatment. The ratio between nitrate and ammonia concentration was larger in 2008 than that in 2009. Adjusting the depth of the drainage outlet according to the growth stages could keep the nitrogen content more stable than fixing the depth in the whole growth period, and reduce nitrogen losses.%为了研究控制排水条件下土壤剖面NH4+-N和NO3--N之间的转化运移规律,2008、2009年在荆州丫角排灌试验站棉花生育期内进行大田暗管控制排水对比试验:2008年全生育期内固定排水出口埋深、2009年分生育阶段调整出口埋深.结果发现:无论调整出口埋深与否,NO3--N含量在土壤垂直剖面上都随土层深度增加而减少.Nn4+-N含量2008年随土层深度增加无明显变化规律、2009年在20、40 cm处较60、80 cm高.控制排水小区表层和20 cm土层NO3--N含量较自由排水小区高;同层土控制排水小区NH4+-N含量比自由排水小区高.2008年各处理NO3--N含量高于2009年,NH3+-N含量低于2009年,NO3--N与NH4+-N同层土平均含量之比大于2009年.分生育阶段调整排水出口埋深可减小田间地下水位波动,更能使田间氮素形态稳定、减少氮素流失.

  12. Fused heterocycles bearing bridgehead nitrogen as potent HIV-1 NNRTIs. Part 4: design, synthesis and biological evaluation of novel imidazo[1,2-a]pyrazines.

    Science.gov (United States)

    Huang, Boshi; Liang, Xin; Li, Cuicui; Chen, Wenmin; Liu, Tao; Li, Xiao; Sun, Yueyue; Fu, Lu; Liu, Huiqing; De Clercq, Erik; Pannecouque, Christophe; Zhan, Peng; Liu, Xinyong

    2015-03-26

    Through a structure-guided core-refining approach, a series of novel imidazo[1,2-a]pyrazine derivatives were designed, synthesized and evaluated as HIV-1 non-nucleoside reverse transcriptase inhibitors (NNRTIs). Biological results of antiviral assay in MT-4 cell cultures showed that 12 target compounds displayed moderate activities against wild-type (wt) HIV-1 strain (IIIB) with EC50 values ranging from 0.26 μM to 19 μM. Among them, 4a and 5a were found to be the two most active analogues possessing EC50 values of 0.26 μM and 0.32 μM respectively, comparable to delavirdine (DLV, EC50 = 0.54 μM) and nevirapine (NVP, EC50 = 0.31 μM) in a cell-based assay. Additionally, 9 compounds showed RT inhibitory activity superior to that of NVP. Moreover, some predicted drug-like properties of representative compounds 4a and 5a, as well as the structure-activity relationship (SAR) analysis were discussed in detail. The binding mode of compound 4a was investigated by molecular simulation studies.

  13. The nitrogen cycle on Mars

    Science.gov (United States)

    Mancinelli, Rocco L.

    1989-01-01

    Nirtogen is an essential element for the evolution of life, because it is found in a variety of biologically important molecules. Therefore, N is an important element to study from a exobiological perspective. In particular, fixed nitrogen is the biologically useful form of nitrogen. Fixed nitrogen is generally defines as NH3, NH4(+), NO(x), or N that is chemically bound to either inorganic or organic molecules, and releasable by hydrolysis to NH3 or NH4(+). On Earth, the vast majority of nitrogen exists as N2 in the atmosphere, and not in the fixes form. On early Mars the same situations probably existed. The partial pressure of N2 on early Mars was thought to be 18 mb, significantly less than that of Earth. Dinitrogen can be fixed abiotically by several mechanisms. These mechanisms include thernal shock from meteoritic infall and lightning, as well as the interaction of light and sand containing TiO2 which produces NH3 that would be rapidly destroyed by photolysis and reaction with OH radicals. These mechanisms could have been operative on primitive Mars.The chemical processes effecting these compounds and possible ways of fixing or burying N in the Martian environment are described. Data gathered in this laboratory suggest that the low abundance of nitrogen along (compared to primitive Earth) may not significantly deter the origin and early evolution of a nitrogen utilizing organisms. However, the conditions on current Mars with respect to nitrogen are quite different, and organisms may not be able to utilize all of the available nitrogen.

  14. Nitrogen tank

    CERN Document Server

    2006-01-01

    Wanted The technical file about the pressure vessel RP-270 It concerns the Nitrogen tank, 60m3, 22 bars, built in 1979, and installed at Point-2 for the former L3 experiment. If you are in possession of this file, or have any files about an equivalent tank (probably between registered No. RP-260 and -272), please contact Marc Tavlet, the ALICE Glimos.

  15. Nitrogen recycling through the gut and the nitrogen economy of ruminants: An asynchronous symbiosis

    DEFF Research Database (Denmark)

    Reynolds, C K; Kristensen, Niels Bastian

    2007-01-01

    The extensive development of the ruminant forestomach sets apart their nitrogen (N) economy from that of nonruminants in a number of respects. Extensive pre-gastric fermentation alters the profile of protein reaching the small intestine, largely through the transformation of nitrogenous compounds...

  16. Effects of Nitrification Inhibitor Dicyandiamide on Ammonium and Nitrate Nitrogen Transformations in Cinnamon Soil%硝化抑制剂双氰胺对褐土中尿素转化的影响

    Institute of Scientific and Technical Information of China (English)

    刘瑜; 串丽敏; 安志装; 赵同科; 赵丽平; 高忠义; 李英

    2011-01-01

    An aerobic soil incubation experiment was carried out to study the effects of different levels of the nitrification inhibitor dicyandi-amide( Dicyandiamide, DCD) on the transformations of nitrate nitrogen and ammonia nitrogen in Beijing cinnamon soil. The results showed that during the 44 days incubation period, the application of DCD resulted in significanT1y higher concentrations of soil NH4+-N and lower concentrations of NO3--N in the soil. When the application rate of DCD was 1%, 2%, 3%, 4% and 5%, the average soil NH4-N concentration was increased by 29.50%,71.84%, 99.73%, 98.90% and 139.69%, the average NO3--N·concentration was decreased by 3.71%, 15.61%, 21.07%, 33.57% and 37.90%, compared with the urea control respectively. The comprehensive index of soil apparent nitrification rate, reflecting the change rule for NO3--N and NH4+-N, was decreased by 12.18%、35.35% 、44.82%、48.18% and 59.93%, respectively. And the reaching balance date of them delayed 7 days, 14 days, 14 days and 21days at the levels of 1%, 2%, 3% and 4%, respectively. It has showed a rising trend until the incubation end at the level of 5%, always lower than the control, and the increase rate was significanT1y decreased by 39.32%,40.00%,52.27% at the levels of 2%, 3%, 4%, respectively. Based on a combination of crop N requirements, environmental benefits and economic factors, the optimum rate of DCD was 4%, with a good inhibitory effect of ammonium oxidation, whilst helping to improve nitrogen use efficiency, and reducing environmental impacts.%采用好气土壤培养法,研究北京地区典型褐土中添加不同浓度水平硝化抑制剂双氰胺(Dicyandiamide,DCD)条件下土壤中铵态氮、硝态氮变化规律.结果表明,44d培养期内,DCD施用显著提高土壤中NH+4 -N浓度,降低NO-3 -N浓度,1%、2%、3%、4%和5%DCD用量处理条件土壤NH+4 -N平均浓度比单施尿素对照处理分别升高29.50%、71.84%、99.73%、98.90%和139.69%,NO-3

  17. Biological fixation and nitrogen transfer by three legume species in mango and soursop organic orchards;Fixacao biologica e transferencia de nitrogenio por leguminosas em pomar organico de mangueira e gravioleira

    Energy Technology Data Exchange (ETDEWEB)

    Paulino, Gleicia Miranda; Barroso, Deborah Guerra, E-mail: gleiciamiranda@yahoo.com.b, E-mail: deborah@uenf.b [Universidade Estadual do Norte Fluminense (UENF), Campos dos Goytacazes, RJ (Brazil). Dept. de Fitotecnia; Alves, Bruno Jose Rodrigues; Urquiaga, Segundo; Espindola, Jose Antonio Azevedo, E-mail: bruno@cnpab.embrapa.b, E-mail: urquiaga@cnpab.embrapa.b, E-mail: jose@cnpab.embrapa.b [EMBRAPA Agrobiologia, Seropedica, RJ (Brazil)

    2009-12-15

    The objective of this work was to evaluate the biological nitrogen fixation (BNF) and the N transfer derived from BNF of the legume species - Gliricidia sepium (gliricidia), Crotalaria juncea (sunnhemp) and Cajanus cajan (pigeon pea) - for an intercropped organic orchard with mango and soursop, through the {sup 15}N natural abundance method. The following inter cropping systems were evaluated: mango and soursop with gliricidia; mango and soursop with sunnhemp; mango and soursop with pigeon pea; and mango and soursop as control. Gliricidia showed the highest BNF potential (80%) , followed by sunnhemp (64.5%) and pigeon pea (45%). After two sunnhemp prunes, 149.5 kg ha{sup -1} of N per year were supplied, with 96.5 kg derived from BNF. After three annual prunes, gliricidia supplied 56.4 and 80.3 kg ha{sup -1} of N per year, with 45 and 64 kg derived from BNF, in two consecutive years. The quantity of N supplied to the system was higher than the mango and soursop requirements. Variations in the natural abundance of {sup 15}N were found only in soursop leaves. Gliricidia and sunnhemp were prominent in N transfer, with approximately 22.5 and 40% respectively. Green manuring using gliricidia permits fractioning of the N supply, which is an advantage in N obtention by the fruit trees (author)

  18. 强化生物脱碳脱氮及回用工艺处理煤化工废水%Enhanced Biological Carbon and Nitrogen Removal and Reuse Process for Treatment of Coal Chemical Wastewater

    Institute of Scientific and Technical Information of China (English)

    唐秀华

    2011-01-01

    采用以臭氧生物活性炭技术为深度处理单元的强化生物脱碳脱氮及回用工艺处理煤化工综合废水,对工艺流程、主要参数、工程调试和运行情况以及处理效果作了介绍.该工艺对高COD、高氨氮的含油难降解煤化工废水具有很好的处理效果,出水水质达到《城市污水再生利用工业用水水质》( GB/T 19923-2005)标准.%Enhanced biological carbon and nitrogen removal and reuse process using ozone/BAC process as advanced treatment unit is used to treat coal chemical wastewater. The process flow, main parameters , commissioning, operation and treatment effect are introduced. The process can treat high COD and NH3 - N, oily and refractory coal chemical wastewater very well. The effluent quality meets the requirement of Reuse of Urban Recycling Water-Water Quality Standard for Industrial Uses (GB/T 19923 -2005).

  19. Direct high-performance liquid chromatography method with refractometric detection designed for stability studies of treosulfan and its biologically active epoxy-transformers.

    Science.gov (United States)

    Główka, Franciszek K; Romański, Michał; Teżyk, Artur; Żaba, Czesław

    2013-01-01

    Treosulfan (TREO) is an alkylating agent registered for treatment of advanced platin-resistant ovarian carcinoma. Nowadays, TREO is increasingly applied iv in high doses as a promising myeloablative agent with low organ toxicity in children. Under physiological conditions it undergoes pH-dependent transformation into epoxy-transformers (S,S-EBDM and S,S-DEB). The mechanism of this reaction is generally known, but not its kinetic details. In order to investigate kinetics of TREO transformation, HPLC method with refractometric detection for simultaneous determination of the three analytes in one analytical run has been developed for the first time. The samples containing TREO, S,S-EBDM, S,S-DEB and acetaminophen (internal standard) were directly injected onto the reversed phase column. To assure stability of the analytes and obtain their complete resolution, mobile phase composed of acetate buffer pH 4.5 and acetonitrile was applied. The linear range of the calibration curves of TREO, S,S-EBDM and S,S-DEB spanned concentrations of 20-6000, 34-8600 and 50-6000 μM, respectively. Intra- and interday precision and accuracy of the developed method fulfilled analytical criteria. The stability of the analytes in experimental samples was also established. The validated HPLC method was successfully applied to the investigation of the kinetics of TREO activation to S,S-EBDM and S,S-DEB. At pH 7.4 and 37 °C the transformation of TREO followed first-order kinetics with a half-life 1.5h.

  20. The Global Nitrogen Cycle

    Science.gov (United States)

    Galloway, J. N.

    2003-12-01

    transfer depended on the reactivity of the emitted material. At the lower extreme of reactivity are the noble gases, neon and argon. Most neon and argon emitted during the degassing of the newly formed Earth is still in the atmosphere, and essentially none has been transferred to the hydrosphere or crust. At the other extreme are carbon and sulfur. Over 99% of the carbon and sulfur emitted during degassing are no longer in the atmosphere, but reside in the hydrosphere or the crust. Nitrogen is intermediate. Of the ˜6×106 TgN in the atmosphere, hydrosphere, and crust, ˜2/3 is in the atmosphere as N2 with most of the remainder in the crust. The atmosphere is a large nitrogen reservoir primarily, because the triple bond of the N2 molecule requires a significant amount of energy to break. In the early atmosphere, the only sources of such energy were solar radiation and electrical discharges.At this point we had an earth with mostly N2 and devoid of life. How did we get to an earth with mostly N2 and teeming with life? First, N2 had to be converted into reactive N (Nr). (The term reactive nitrogen (Nr) includes all biologically active, photochemically reactive, and radiatively active nitrogen compounds in the atmosphere and biosphere of the Earth. Thus, Nr includes inorganic reduced forms of nitrogen (e.g., NH3 and NH4+), inorganic oxidized forms (e.g., NOx, HNO3, N2O, and NO3-), and organic compounds (e.g., urea, amines, and proteins).) The early atmosphere was reducing and had limited NH3. However, NH3 was a necessary ingredient in forming early organic matter. One possibility for NH3 generation was the cycling of seawater through volcanics (Holland, 1984). Under such a process, NH3 could then be released to the atmosphere where, when combined with CH4, H2, H2O, and electrical energy, organic molecules including amino acids could be formed (Miller, 1953). In essence, electrical discharges and UV radiation can convert mixtures of reduced gases into mixtures of organic

  1. Nitrogen Compounds in Radiation Chemistry

    Energy Technology Data Exchange (ETDEWEB)

    Sims, H.E. [NNL Sellafield (United Kingdom); Dey, G.R. [Radiation and Photochemistry Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400085 (India); Vaudey, C.E.; Peaucelle, C. [Institut de Physique Nucleaire de Lyon - IPNL, 69 - Lyon (France); Boucher, J.L. [Lab. de Chimie et Biochimie Pharmacologiques et Toxicologiques, UMR 8601 CNRS 45 rue des Saints Peres, 75270 Paris cedex 06, Univ Paris 5, 75 (France); Toulhoat, N. [Institut de Physique Nucleaire de Lyon (France); Commissariat a l' Energie Atomique CEA/DEN, Centre de Saclay (France); Bererd, N. [Institut de Physique Nucleaire de Lyon (France); IUT Departement Chimie, Universite Claude Bernard Lyon 1 (France); Koppenol, W.H. [Department of Chemistry and Applied Biosciences, ETH Zurich (Switzerland); Janata, E. [Helmholtz-Zentrum fuer Materialien und Energie, Solar Energy Research, Berlin (Germany); Dauvois, V.; Durand, D.; Legand, S.; Roujou, J.L.; Doizi, D.; Dannoux, A.; Lamouroux, C. [Laboratoire de Speciation des Radionucleides et des Molecules, DEN/DPC/Service d' Etude du Comportement des Radionucleides, CEA Saclay, 91 - Gif sur yvette (France)

    2009-07-01

    Water radiolysis in presence of N{sub 2} is probably the topic the most controversy in the field of water radiolysis. It still exists a strong discrepancy between the different reports of ammonia formation by water radiolysis in presence of N{sub 2} and moreover in absence of oxygen there is no agreement on the formation or not of nitrogen oxide like NO{sub 2}- and NO{sub 3}-. These discrepancies come from multiple sources: - the complexity of the reaction mechanisms where nitrogen is involved - the experimental difficulties - and, the irradiation conditions. The aim of the workshop is to capitalize the knowledge needed to go further in simulations and understanding the problems caused (or not) by the presence of nitrogen / water in the environment of radioactive materials. Implications are evident in terms of corrosion, understanding of biological systems and atmospheric chemistry under radiation. Topics covered include experimental and theoretical approaches, application and fundamental researches: - Nitrate and Ammonia in radiation chemistry in nuclear cycle; - NOx in biological systems and atmospheric chemistry; - Formation of Nitrogen compounds in Nuclear installations; - Nitrogen in future power plant projects (Gen4, ITER...) and large particle accelerators. This document gathers the transparencies available for 7 of the presentations given at this workshop. These are: - H.E SIMS: 'Radiation Chemistry of Nitrogen Compounds in Nuclear Power Plant'; - G.R. DEY: 'Nitrogen Compounds Formation in the Radiolysis of Aqueous Solutions'; - C.E. VAUDEY et al.: 'Radiolytic corrosion of nuclear graphite studied with the dedicated gas irradiation cell of IPNL'; - J.L. BOUCHER: 'Roles and biosynthesis of NO in eukaryotes and prokaryotes'; - W.H. KOPPENOL: 'Chemistry of NOx'; - E. JANATA: 'Yield of OH in N{sub 2}O saturated aqueous solution'; - V. DAUVOIS: 'Analytical strategy for the study of radiolysis gases'

  2. Founding, early history, and transformation of the Journal for Lipid Research to an American Society of Biochemistry and Molecular Biology journal.

    Science.gov (United States)

    Dennis, Edward A

    2009-04-01

    The Journal of Lipid Research was founded in October, 1959 and has had a long and distinguished history. It evolved from an initial concept of a loose-leaf methodology handbook to a major journal for the lipid field. Its growth has in many ways paralleled the growth and expansion of lipid research. Today, it is operated as a journal of the American Society for Biochemistry and Molecular Biology at the forefront of biomedical research on lipids.

  3. Enhanced nitrogen deposition over China

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Xuejun; Zhang, Ying; Han, Wenxuan; Tang, Aohan; Shen, Jianlin; Cui, Zhenling; Christie, Peter; Zhang, Fusuo [College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193 (China); Vitousek, Peter [Department of Biology, Stanford University, Stanford, California 94305 (United States); Erisman, Jan Willem [VU University Amsterdam, 1081 HV Amsterdam (Netherlands); Goulding, Keith [The Sustainable Soils and Grassland Systems Department, Rothamsted Research, Harpenden AL5 2JQ (United Kingdom); Fangmeier, Andreas [Institute of Landscape and Plant Ecology, University of Hohenheim, 70593 Stuttgart (Germany)

    2013-02-28

    China is experiencing intense air pollution caused in large part by anthropogenic emissions of reactive nitrogen. These emissions result in the deposition of atmospheric nitrogen (N) in terrestrial and aquatic ecosystems, with implications for human and ecosystem health, greenhouse gas balances and biological diversity. However, information on the magnitude and environmental impact of N deposition in China is limited. Here we use nationwide data sets on bulk N deposition, plant foliar N and crop N uptake (from long-term unfertilized soils) to evaluate N deposition dynamics and their effect on ecosystems across China between 1980 and 2010. We find that the average annual bulk deposition of N increased by approximately 8 kilograms of nitrogen per hectare (P < 0.001) between the 1980s (13.2 kilograms of nitrogen per hectare) and the 2000s (21.1 kilograms of nitrogen per hectare). Nitrogen deposition rates in the industrialized and agriculturally intensified regions of China are as high as the peak levels of deposition in northwestern Europe in the 1980s, before the introduction of mitigation measures. Nitrogen from ammonium (NH4+) is the dominant form of N in bulk deposition, but the rate of increase is largest for deposition of N from nitrate (NO3-), in agreement with decreased ratios of NH3 to NOx emissions since 1980. We also find that the impact of N deposition on Chinese ecosystems includes significantly increased plant foliar N concentrations in natural and semi-natural (that is, non-agricultural) ecosystems and increased crop N uptake from long-term-unfertilized croplands. China and other economies are facing a continuing challenge to reduce emissions of reactive nitrogen, N deposition and their negative effects on human health and the environment.

  4. The Mechanism of Biological Nitrification Inhibitor Released by Sorghum Under Different Nitrogen Sources%高粱在不同氮源处理下分泌生物硝化抑制剂的差异

    Institute of Scientific and Technical Information of China (English)

    张莹; 张明超; 朱毅勇; 王火焰

    2012-01-01

    高粱根系能分泌抑制土壤亚硝化细菌的物质,称为生物硝化抑制剂.在铵态氮存在时,这类物质会大量分泌,而以硝态氮为氮源时则分泌很少.目前还不清楚,这是因为不同氮素代谢的差异所引起的,还是根系吸收铵态氮后根际酸化影响了硝化作用.因此本研究通过砂培试验,用铵硝营养处理高粱根系,并且控制pH,最后收集根系分泌物,利用一种荧光标记的亚硝酸细菌来测定高粱分泌的硝化抑制剂活性,计算其分泌速率.结果发现,铵态氮是导致根系大量分泌硝化抑制剂的主要原因,并且在根际pH<6时,硝化抑制剂的活性与分泌速率随着根系分泌氢离子数量的增加而增强.研究表明,铵态氮营养下高粱根系分泌生物硝化抑制剂高于硝态氮营养可能是高粱根系保护根际铵氧化,提高氮素利用率的一个重要生理机制.%The ability to suppress soil nitrification through the release of nitrification inhibitors from sorghum roots is termed "biological nitrification inhibitor" (BNI). It was reported that the release of BNI from sorghum roots under ammonium nutrition was much more than under nitrate nutrition. It is not understood whether the nitrogen metabolism or the rhizosphere pH in relation to the uptake of ammonium and nitrate is the effect on the release of BNI. In this study, sorghum plants were cultivated in sands with ammonium or nitrate. The root medium pH was controlled by pH-stat system and root exudation was collected to test the BNI activity and release rate by gene modified Nitrosomonas with florescence. The results showed that nitrogen form was the major factor which affected the release of BNI. Moreover, under the pH 6.0, the release of BNI was related to the release of proton by sorghum roots. Our study indicated the release of BNI by sorghum roots under ammonium nutrition rather than under nitrate nutrition might be a potential to suppress ammonium oxidation in soil

  5. Climate change affects key nitrogen-fixing bacterial populations on coral reefs

    NARCIS (Netherlands)

    Santos, Henrique F.; Carmo, Flavia L.; Duarte, Gustavo; Dini-Andreote, Francisco; Castro, Clovis B.; Rosado, Alexandre S.; van Elsas, Jan Dirk; Peixoto, Raquel S.

    2014-01-01

    Coral reefs are at serious risk due to events associated with global climate change. Elevated ocean temperatures have unpredictable consequences for the ocean's biogeochemical cycles. The nitrogen cycle is driven by complex microbial transformations, including nitrogen fixation. This study investiga

  6. Transition metal-free one-pot synthesis of nitrogen-containing heterocycles.

    Science.gov (United States)

    Kumari, Simpal; Kishore, Dharma; Paliwal, Sarvesh; Chauhan, Rajani; Dwivedi, Jaya; Mishra, Aakanksha

    2016-02-01

    One-pot heterocyclic synthesis is an exciting research area as it can open routes for the development of otherwise complex transformations in organic synthesis. Heterocyclic compounds show wide spectrum of applications in medicinal chemistry, chemical biology, and materials science. These heterocycles can be generated very efficiently through highly economical and viable routes using one-pot synthesis. In particular, the metal-free one-pot synthetic protocols are highly fascinating due to several advantages for the industrial production of heterocyclic frameworks. This comprehensive review is devoted to the transition metal-free one-pot synthesis of nitrogen-containing heterocycles from the period 2010-2013.

  7. 脱氮除磷膜生物反应器工艺耦合混凝过程优化%Optimization of biological nitrogen and phosphorus removal membrane bioreactor process coupling with coagulation process

    Institute of Scientific and Technical Information of China (English)

    王朝朝; 李思敏; 徐宇峰; 任金柱; 李军

    2016-01-01

    A bench-scale biological nitrogen and phosphorus removal membrane bioreactor (UCT-MBR) process was operated to treat carbon-limited municipal wastewater regarding on the influences of ferric chloride (FeCl3·6H2O) addition on the process performance and membrane fouling. FT-IR (Fourier translation infrared spectroscopy, FT-IR) and EDX (energy dispersive X-Ray, EDX) were used to analyze membrane surface foulants. The results show that the phosphorus removal is strengthened with the addition of ferric chloride. The highest removal efficiency of TP (total phosphorus, TP) can be obtained in UCT-MBR process under the condition of the optimal-phosphorus-removal dosing (dosage of 1.8 mmol/L) combined with the biological phosphorus removal process. Membrane fouling is alleviated with the addition of ferric chloride mainly through increasing the sludge particle size and reducing the SMP (soluble microbial products, SMP) fraction concentration with relative molecular mass above 105. The lowest membrane fouling rate in the UCT-MBR process can be obtained under the condition of the optimal-sludge-filterability dosing (dosage of 2.6 mmol/L),while the optimal-sludge-filterability dosing exhibits a strong influence on sludge bioactivities and reduces the sludge capabilities of nitrification and phosphorus release/uptake, which limits the performance of nitrogen and phosphorus removal. The ferric chloride addition has no effects on their compositions. Moreover, the influence of inorganic fouling on membrane fouling rate is found to be smaller than that of organic fouling. Besides, lag effects are found for inorganic elements combined with biopolymers to form a dense cake layer.%采用脱氮除磷膜生物反应器(UCT-MBR)工艺处理碳源受限型市政污水,考察氯化铁(FeCl3·6H2O)的投加对UCT-MBR工艺运行效能与膜污染的影响,用傅里叶红外光谱(FT-IR)和能谱(EDX)对膜污染物质进行分析。研究结果表明:氯化铁的投加强化除磷

  8. Biological treatment of Crohn's disease

    DEFF Research Database (Denmark)

    Nielsen, Ole Haagen; Bjerrum, Jacob Tveiten; Seidelin, Jakob Benedict

    2012-01-01

    Introduction of biological agents for the treatment of Crohn's disease (CD) has led to a transformation of the treatment paradigm. Several biological compounds have been approved for patients with CD refractory to conventional treatment: infliximab, adalimumab and certolizumab pegol (and...

  9. Enzymology of biological nitrogen fixation. Annual report

    Energy Technology Data Exchange (ETDEWEB)

    Burris, R.H.

    1992-05-01

    Two genes involved in the regulation of nitrogenase activity, draT and draG, were cloned and found to be contiguous on the Azospirillum brasilense chromosome. The nifH gene, encoding dinitrogenase reductase, is near to draT with an intervening gap of 1.9 kb. The organization of these genes in Azospirillum lipoferum and Rhodosprillum rubrum is similar, but nifH and draT are separated by only 400 bp in the organisms. A. brasilense draTG is very similar to draTG in R. rubrum with 91.8% similarity and 85.3% identity at the amino acid level. Apparently A. brasilense uses the normal ATG initiation codon for draT, and draG. The genes for A. brasilense were able to restore function to appropriate mutants of R. rubrum. The heterologous expression of A. brasilense draTG in R. rubrum was not fully normal, as it responded more slowly to darkness and more quickly to ammonia than wild type cells. Our mutational analysis of the draTG region of A. brasilense confirms the function of these genes in the regulation of nitrogenase activity, but it also revealed minor but demonstrable differences in the control systems of R. rubrum and A. brasilense.

  10. ENGINEERING BULLETIN: ROTATING BIOLOGICAL CONTACTORS

    Science.gov (United States)

    Rotating biological contactors employ aerobic fixed-film treatment to degrade either organic and/or nitrogenous (ammonia-nitrogen) constituents present in aqueous waste streams. ixed-film systems provide a surface to which the biomass can adhere. Treatment is achieved as the wast...

  11. Nitrogen cycle model of agroecosystem in the karst region of Guizhou Province

    Institute of Scientific and Technical Information of China (English)

    CHEN Ye; LIAN Bin

    2010-01-01

    According to the transport theory of soil solutes and the conditions of soil, geology and climate in the karst region of Guizhou Province, a numerical simulation model of edaphic nitrogen element transport under field conditions is initially established. In this model, NO-3 and NH+4 are regarded as soil solutes. Transformation mechanisms such as biological release, bio-immobilization, ammonium adsorption-desorption, nitration-denitrification and factors of crop root uptaking are considered in this model. It is hoped that the data from this model could directly be used to guide agricultural production in this region and offer feasible ways to improve the use of nitrogen element, sustainable development of agriculture in karst mountainous areas and natural environment.

  12. Nitrogen Transformation and Controlling Factors in Permo-Carboniferous Coal-bearing Strata in Henan and Shanxi Coalmines%河南-山西地区石炭—二叠纪含煤地层中氮的转化及控制因素分析

    Institute of Scientific and Technical Information of China (English)

    高永利; 代凤红; 王福国; 郑启明; 于红艳

    2012-01-01

    From determinations of organic nitrogen isotopic composition and fixed ammonium content in partings in the Nanzhai and Wangtaipu coalmines, Shanxi and the Zhucun coalmine, Henan, mainly studied variations of both the above and controlling factors of reallocation in coal-bearing strata. The result has demonstrated that the transformation of nitrogen element in coal seams is mainly impacted by diagenetic temperature, stability of reacting minerals and sedimentary environment. The higher genetic temperature, lower stability of reacting minerals and transitional littoral sedimentary environment are all propitious to the release of organic nitrogen. Nitrogen gas in CBM and NH4 + in ammonium containing clay minerals all derived from organic nitrogen. During the high metamorphic bituminous coal stage, organic nitrogen isotopic composition and fixed ammonium content are all changed regularly along with the deepening of coalification degree, thus the result of combined actions under multiple diagenetic conditions.%通过对山西南寨煤矿、王台铺煤矿以及河南朱村煤矿部分矸石的有机氮同位素组成及固定铵含量进行测定,主要研究了含煤地层中有机氮同位素组成和固定铵含量变化以及氮元素在含煤地层中重新分配的控制因素.结果表明,煤层中氮元素的转化主要受成岩温度、反应矿物的稳定性以及沉积环境的影响.较高的成岩温度、反应矿物较低的稳定性以及滨海过渡沉积环境均有利于有机氮的释放;煤层气中的氮气以及含铵黏土矿物中的NH4+均来源于有机氮;在高变质烟煤阶段,有机氮同位素组成及固定铵含量均随煤化程度加深而发生规律性变化,是多种成岩条件共同作用所造成.

  13. Nitrogen in Ancient Mud: A Biosignature?

    Science.gov (United States)

    Stüeken, Eva E.

    2016-09-01

    Nitrogen is an essential nutrient for all life on Earth and possibly elsewhere. Burial of nitrogen bound to organic matter constitutes the major flux of nitrogen into sediments today, which has led to the inference that nitrogen enrichments in sedimentary rocks may be a biosignature. However, abiotic processes such as lightning or volcanism can fix atmospheric N2 and contribute to sedimentary nitrogen burial in the absence of life. It is therefore uncertain whether observed nitrogen enrichments of up to 430 ppm in Paleoarchean metasedimentary biotite grains are indeed biogenic. This study seeks to address that problem with a numerical model. The NH4+ concentration of an abiotic ocean is modeled as a function of source fluxes, pH-dependent NH3 volatilization, and equilibrated adsorption of NH4+ onto clay particles. The results suggest that the observed nitrogen concentrations in Paleoarchean biotite can only be reconciled with purely abiotic processes if the ocean was more acidic (pH origin. While this does not necessitate a particular metabolism such as biological N2 fixation, the data provide evidence of nitrogen utilization back to 3.8 Gyr. Nitrogen abundances could thus provide useful information in extraterrestrial missions.

  14. 不同生态修复措施对滇池沉积物无机氮迁移转化影响%Effects of Different Ecological Restoration Measures on Transferring and Transformation of Inorganic Nitrogen in Dianchi Sediment

    Institute of Scientific and Technical Information of China (English)

    陈国元; 周易勇

    2011-01-01

    Effects of three ecological restoration measures which are planting Vallisneria spiraslis L. directly in Dianchi sediment, planting Vallisneria spiraslis L. in sediment covered by silver sand and planting Vallisneria spiraslis L. in sediment covered by laterite on transfer and transformation of inorganic nitrogen were studied by indoor incubation experiment. Results showed that the concentrations of CODMn, SS and NH4+-N in waters and NH/-N in sediment were the highest in plastic casks treated with planting Vallisneria spiraslis L. diretly in sediment, and there conentrations in plastic casks treated with planting Vallisneria spiraslis L. in sediment covered by laterite were the lowest. Ammonia and nitrite oxidation in waters firstly appear in the plastic casks treated with planting Vallisneria spiraslis L. in sediment covered by silver sand and laterite, and the date were the 13th and 19th day separately. Rates of ammonia and nitrite oxidation in waters and sediment were the highest in plastic casks treated with planting Vallisneria spiraslis L. in sediment covered by laterite, and followed by rates in plastic casks treated with planting Vallisneria spiraslis L. in sediment covered by silver sand. Results indicated that planting Vallisneria spiraslis L. in Dianchi sediment covered by silver sand and laterite are able to not only hold back the release of reductive material, suspended paniculate material and ammonia into water from sediment, but also decrease markedly ammonia concentration in sediment. Planting Vallisneria spiraslis L. in sediment covered by laterite which provided an effective attachment matrix for Vallisneria spiraslis L. to take a root and promoted Vallisneria spiraslis L. grow and recovery has the better result than planting Vallisneria spiraslis L. in sediment covered by silver sand, which indicated that planting Vallisneria spiraslis L. in sediment covered by laterite is the effective way of ecological restoration for contaminative sediment.%

  15. Fixação biológica de nitrogênio em cultivares de feijão-caupi recomendadas para o Estado de Roraima Biological nitrogen fixation in cowpea cultivars recommended for Roraima state, Brazil

    Directory of Open Access Journals (Sweden)

    Shirlany Ribeiro de Melo

    2009-09-01

    Full Text Available O objetivo deste trabalho foi avaliar a fixação biológica de nitrogênio (FBN em cinco cultivares de feijão-caupi: BR 17 Gurguéia, BRS Guariba, BRS Mazagão, UFRR Grão Verde e Pretinho Precoce 1. Em 2007, foram conduzidos um experimento em casa de vegetação e outro em campo, em esquema fatorial com cinco cultivares de feijão-caupi e quatro fontes de nitrogênio: adubação com ureia (50 kg ha-1 de N, inoculação com a estirpe de Bradyrhizobium BR 3262 ou BR 3267 e um controle absoluto. Aos 35 dias após a emergência das plantas, foram avaliados número e massa de nódulos secos, massa de matéria seca e N total da parte aérea, eficiência nodular em casa de vegetação e rendimento de grãos na colheita em campo. Em casa de vegetação, foi observada alta nodulação e eficiência nodular para ambas as estirpes em todas as cultivares. Em campo, a nodulação e o N total foram menores para todas as cultivares, comparativamente à casa de vegetação, o que indica interferência de fatores edafoclimáticos na FBN. Ocorreu aumento no rendimento de grãos em todas as cultivares em decorrência da inoculação, especialmente com a estirpe BR 3262.The objective of this work was to evaluate the biological nitrogen fixation (BNF in five cowpea cultivars: BR 17 Gurguéia, BRS Guariba, BRS Mazagão, UFRR Grão Verde and Pretinho Precoce 1. In 2007, one greenhouse and one field experiment were performed using a factorial design with five cowpea cultivars and four nitrogen sources: urea fertilization (50 kg ha-1 of N, inoculation with BR 3262 or BR 3267 Bradyrhizobium strains, and absolute control. Thirty-five days after plant emergency, the number and dry weight of nodules, the dry matter weight and the total N of the shoots, the nodule efficiency in greenhouse plants and the grain yield for the field experiment plants were evaluated. In the greenhouse, high nodulation and nodule efficiency were observed for both strains in all cultivars. In

  16. Understanding Nitrogen Fixation

    Energy Technology Data Exchange (ETDEWEB)

    Paul J. Chirik

    2012-05-25

    The purpose of our program is to explore fundamental chemistry relevant to the discovery of energy efficient methods for the conversion of atmospheric nitrogen (N{sub 2}) into more value-added nitrogen-containing organic molecules. Such transformations are key for domestic energy security and the reduction of fossil fuel dependencies. With DOE support, we have synthesized families of zirconium and hafnium dinitrogen complexes with elongated and activated N-N bonds that exhibit rich N{sub 2} functionalization chemistry. Having elucidated new methods for N-H bond formation from dihydrogen, C-H bonds and Broensted acids, we have since turned our attention to N-C bond construction. These reactions are particularly important for the synthesis of amines, heterocycles and hydrazines with a range of applications in the fine and commodity chemicals industries and as fuels. One recent highlight was the discovery of a new N{sub 2} cleavage reaction upon addition of carbon monoxide which resulted in the synthesis of an important fertilizer, oxamide, from the diatomics with the two strongest bonds in chemistry. Nitrogen-carbon bonds form the backbone of many important organic molecules, especially those used in the fertilizer and pharamaceutical industries. During the past year, we have continued our work in the synthesis of hydrazines of various substitution patterns, many of which are important precursors for heterocycles. In most instances, the direct functionalization of N{sub 2} offers a more efficient synthetic route than traditional organic methods. In addition, we have also discovered a unique CO-induced N{sub 2} bond cleavage reaction that simultaneously cleaves the N-N bond of the metal dinitrogen compound and assembles new C-C bond and two new N-C bonds. Treatment of the CO-functionalized core with weak Broensted acids liberated oxamide, H{sub 2}NC(O)C(O)NH{sub 2}, an important slow release fertilizer that is of interest to replace urea in many applications. The

  17. An in vitro study of liposomal curcumin: stability, toxicity and biological activity in human lymphocytes and Epstein-Barr virus-transformed human B-cells.

    Science.gov (United States)

    Chen, Changguo; Johnston, Thomas D; Jeon, Hoonbae; Gedaly, Roberto; McHugh, Patrick P; Burke, Thomas G; Ranjan, Dinesh

    2009-01-21

    Curcumin is a multi-functional and pharmacologically safe natural agent. Used as a food additive for centuries, it also has anti-inflammatory, anti-virus and anti-tumor properties. We previously found that it is a potent inhibitor of cyclosporin A (CsA)-resistant T-cell co-stimulation pathway. It inhibits mitogen-stimulated lymphocyte proliferation, NFkappaB activation and IL-2 signaling. In spite of its safety and efficacy, the in vivo bioavailability of curcumin is poor, and this may be a major obstacle to its utility as a therapeutic agent. Liposomes are known to be excellent carriers for drug delivery. In this in vitro study, we report the effects of different liposome formulations on curcumin stability in phosphate buffered saline (PBS), human blood, plasma and culture medium RPMI-1640+10% FBS (pH 7.4, 37 degrees C). Liposomal curcumin had higher stability than free curcumin in PBS. Liposomal and free curcumin had similar stability in human blood, plasma and RPMI-1640+10% FBS. We looked at the toxicity of non-drug-containing liposomes on (3)H-thymidine incorporation by concanavalin A (Con A)-stimulated human lymphocytes, splenocytes and Epstein-Barr virus (EBV)-transformed human B-cell lymphoblastoid cell line (LCL). We found that dimyristoylphosphatidylcholine (DMPC) and dimyristoylphosphatidylglycerol (DMPG) were toxic to the tested cells. However, addition of cholesterol to the lipids at DMPC:DMPG:cholesterol=7:1:8 (molar ratio) almost completely eliminated the lipid toxicity to these cells. Liposomal curcumin had similar or even stronger inhibitory effects on Con A-stimulated human lymphocyte, splenocyte and LCL proliferation. We conclude that liposomal curcumin may be useful for intravenous administration to improve the bioavailability and efficacy, facilitating in vivo studies that could ultimately lead to clinical application of curcumin.

  18. Modelling and simulation of the phased feeding process with biological elimination of nitrogen and phosphorus; Modelizacion y simulacion del proceso de alimentacion escalonada con eliminacion biologica de nitrogeno y fosforo

    Energy Technology Data Exchange (ETDEWEB)

    Rodriguez, J. C.; Jorda, J. R.; Cortacans, J. A. [Infilco Espanola, S. A. Madrid (Spain)

    2000-07-01

    It is set forth experimental results on an Alternative Phase Step Feed Pilot Plant (Nitrogen and Phosphorus removal) placed in San Agustin de Guadalix (Madrid CYII) WWTP. Results on IAWQ Model N. 2 calibration and evaluation of its predictive capacity are also included. Finally, it is introduced the Alphasin, Process Simulator that INFILCO uses as a design and assessment tool on Alpha Process Plants with organic matter removal exclusively or incorporating nutrients (Nitrogen and/or Phosphorus) removal. (Author) 8 refs.

  19. Effects of bacteria on nitrogen and phosphorus release from river sediment

    Institute of Scientific and Technical Information of China (English)

    WU Qunhe; ZHANG Renduo; HUANG Shan; ZHANG Hengjun

    2008-01-01

    To better understand the mechanisms of eutrophication,we addressed the microbial processes that influence many key aspects of water-sediment systems.In this study,a large column experiment was conducted for 30 d.Along the column,solution samples were collected at different locations at different time.The samples were analyzed for physical,chemical,and biological properties of the sediment and oveflying water.The results showed that the amount of nitrogen transforming bacteria was higher than than that of phosphorous bacteria.The amount of nitrogen transforming bacteria was in the order:ammonitier>denitrifying bacteria>nitrobacteria and nitrosomonas.Principal component analysis indicared that the three main factors accounted for more than 90%overall contributions for bacterium growth,which represented nutrition,organics and oxygen,and pH and redox potential(Eh)of the environment.Corresponding to the bacteria,the concentrations of nitrogen in the system was in the order:ammonia(NH4+-N)>nitrate(NO3--N)>nitrite(NO2--N),The fluxes of N and P clearly showed a temporal release and adsorption processes in the water-sediment system.The large magnitude of N fluxes suggested that N might act as an important contamination source for the water quality.However,P exchange between the sediment and overlying water was less intensive during the experiment.

  20. Development and Experimental Evaluation of a Steady-state Model for the Step-feed Biological Nitrogen Removal Process%分段进水生物脱氮工艺稳态模型的开发与试验评价

    Institute of Scientific and Technical Information of China (English)

    祝贵兵; 彭永臻; 王淑莹; 左金龙; 王亚宜; 郭建华

    2007-01-01

    In this article, a steady-state mathematical model was developed and experimentally evaluated to investigate the effect of influent flow distribution and volume ratios of anoxic and aerobic zones in each stage on the total nitrogen concentration of the effluent in the step-feed biological nitrogen removal process.Unlike the previous modeling methods, this model can be used to calculate the removal rates of ammonia and nitrate in each stage and thereby predict the concentrations of ammonia, nitrate, and total nitrogen in the effluent.To verify the simulation results, pilot-scale experimental studies were carried out in a four-stage step feed process.Good correlations were achieved between the measured data and the simulation results, which proved the validity of the developed model.The sensitivity of the model predictions was analyzed.After verification of the validity, the step feed process was optimally operated for five months using the model and the criteria developed for the design and operation.During the pilot-scale experimental period, the effluent total nitrogen concentrations were all below 5mg·L-1.with more than 90% removal efficiency.

  1. Mean age distribution of inorganic soil-nitrogen

    Science.gov (United States)

    Woo, Dong K.; Kumar, Praveen

    2016-07-01

    Excess reactive nitrogen in soils of intensively managed landscapes causes adverse environmental impact, and continues to remain a global concern. Many novel strategies have been developed to provide better management practices and, yet, the problem remains unresolved. The objective of this study is to develop a model to characterize the "age" of inorganic soil-nitrogen (nitrate, and ammonia/ammonium). We use the general theory of age, which provides an assessment of the time elapsed since inorganic nitrogen has been introduced into the soil system. We analyze a corn-corn-soybean rotation, common in the Midwest United States, as an example application. We observe two counter-intuitive results: (1) the mean nitrogen age in the topsoil layer is relatively high; and (2) mean nitrogen age is lower under soybean cultivation compared to corn although no fertilizer is applied for soybean cultivation. The first result can be explained by cation-exchange of ammonium that retards the leaching of nitrogen, resulting in an increase in the mean nitrogen age near the soil surface. The second result arises because the soybean utilizes the nitrogen fertilizer left from the previous year, thereby removing the older nitrogen and reducing mean nitrogen age. Estimating the mean nitrogen age can thus serve as an important tool to disentangle complex nitrogen dynamics by providing a nuanced characterization of the time scales of soil-nitrogen transformation and transport processes.

  2. Micro-computed tomography of pulmonary fibrosis in mice induced by adenoviral gene transfer of biologically active transforming growth factor-β1

    Directory of Open Access Journals (Sweden)

    Gauldie Jack

    2010-12-01

    Full Text Available Abstract Background Micro-computed tomography (micro-CT is a novel tool for monitoring acute and chronic disease states in small laboratory animals. Its value for assessing progressive lung fibrosis in mice has not been reported so far. Here we examined the importance of in vivo micro-CT as non-invasive tool to assess progression of pulmonary fibrosis in mice over time. Methods Pulmonary fibrosis was induced in mice by intratracheal delivery of an adenoviral gene vector encoding biologically active TGF-ß1 (AdTGF-ß1. Respiratory gated and ungated micro-CT scans were performed at 1, 2, 3, and 4 weeks post pulmonary adenoviral gene or control vector delivery, and were then correlated with respective histopathology-based Ashcroft scoring of pulmonary fibrosis in mice. Visual assessment of image quality and consolidation was performed by 3 observers and a semi-automated quantification algorithm was applied to quantify aerated pulmonary volume as an inverse surrogate marker for pulmonary fibrosis. Results We found a significant correlation between classical Ashcroft scoring and micro-CT assessment using both visual assessment and the semi-automated quantification algorithm. Pulmonary fibrosis could be clearly detected in micro-CT, image quality values were higher for respiratory gated exams, although differences were not significant. For assessment of fibrosis no significant difference between respiratory gated and ungated exams was observed. Conclusions Together, we show that micro-CT is a powerful tool to assess pulmonary fibrosis in mice, using both visual assessment and semi-automated quantification algorithms. These data may be important in view of pre-clinical pharmacologic interventions for the treatment of lung fibrosis in small laboratory animals.

  3. How Subduction Settings can Affect Planetary Nitrogen Cycle: An Experimental Insight

    Science.gov (United States)

    Cedeno, D. G.; Conceicao, R. V.; Wilbert de Souza, M. R.; Carniel, L. C.; Schmitz Quinteiro, R. V.

    2015-12-01

    Nitrogen is one of the main building blocks of life on Earth and its elemental cycle is deeply connected with organic matter and the biological system. It is known that nitrogen can be stored in mantellic phases (such as clinopyroxenes) or in metallic alloys under high pressures, meaning that Earth's mantle, and even the core, could be efficient nitrogen reservoirs. Probably, nitrogen is present in these deep Earth systems since the formation of our planet. Nevertheless, it is possible that superficial nitrogen can be reintroduced in the mantle through tectonic processes along Earth history. This is reinforced by d15N values in inclusions in diamonds and other deep mantle phases. We believe that subduction zones are efficient enough to transport nitrogen from surface to mantle. Clay minerals with high charge exchange capacity (CEC) are good candidates to convey nitrogen in subduction zones, especially when we take into account the similarities between K+ and NH4+. To simulate the high-pressure high-temperature conditions found in subduction zones, we performed a series of experiments with montmorillonite clay mineral undergone to high pressure and high temperature produced by a hydraulic press coupled with toroidal chambers, in pressures ranging from 2.5 to 7.7 GPa and temperatures up to 700oC. We used ex situ XRD analysis to accompany the main montmorillonite structural changes and FTIR analysis to determine quantitatively the presence of nitrogen. So far, our results show that the main structural transition in montmorillonite happens at ~350oC at room pressure and ~450oC at 2.5 and 4.0 GPa and consists in the transformation of an open clay structure to a closed mica structure (tobelite). FTIR data show the presence of nitrogen in all the analysed experiments. With the data obtained, we can presume that clay minerals carried in subduction zones can successfully transport nitrogen and other volatiles to the mantle. However, only cold subduction systems have the

  4. Governing processes for reactive nitrogen compounds in the European atmosphere

    DEFF Research Database (Denmark)

    Hertel, Ole; Skjøth, Carsten Ambelas; Reis, S.;

    2012-01-01

    Reactive nitrogen (N-r) compounds have different fates in the atmosphere due to differences in the governing processes of physical transport, deposition and chemical transformation. N-r compounds addressed here include reduced nitrogen (NHx: ammonia (NH3) and its reaction product ammonium (NH4+))...

  5. ANAEROBIC TRANSFORMATION OF BIODEGRADABLE WASTE; SIMULTANEOUS PRODUCTION OF ENERGY AND FERTILIZER

    Directory of Open Access Journals (Sweden)

    Amirhossein Malakahmad

    2013-01-01

    Full Text Available Almost 40% of the total waste produced in developing countries is made of biodegradable waste. Typically the waste including the biodegradable portion is transported to the so-called landfills without any segregation process, treatment and utilization in advance. Although mitigation practices such as source reduction, reuse and recycle are essential and required to be practiced in any integrated waste management plan, one of the best approaches to reduce the volume of the waste goes to the landfills is biological transformation. Biological transformation of waste occurs in two major categories; aerobic and anaerobic biodegradation. Anaerobic transformation of biodegradable waste produces methane gas (CH4 which is the valuable source of energy. At first the gas has some impurities such as CO2 and other trace materials which are required to be removed from the main stream before utilization. In addition to methane, the byproduct of the anaerobic process is slurry that can be used as soil amendment agent. It contains several vital elements such as nitrogen, phosphorous and potassium (N, P and K for crops. The quality of slurry is required to be assessed since it affects the soil conditions and plants growth. In this study the importance of biological transformation in waste management systems has been discussed. Different methods and significant factors in methane production via anaerobic digestion have been highlighted and finally, the criteria of produced fertilizer have been elaborated.

  6. Fixating on metals: New insights into the role of metals in nodulation and symbiotic nitrogen fixation

    Directory of Open Access Journals (Sweden)

    Manuel eGonzález-Guerrero

    2014-02-01

    Full Text Available Symbiotic nitrogen fixation is one of the most promising and immediate alternatives to the overuse of polluting nitrogen fertilizers for improving plant nutrition. At the core of this process are a number of metalloproteins that catalyze and provide energy for the conversion of atmospheric nitrogen to ammonia, eliminate free radicals produced by this process, and create the microaerobic conditions required by these reactions. In legumes, metal cofactors are provided to endosymbiotic rhizobia within root nodule cortical cells. However, low metal bioavailability is prevalent in most soils types, resulting in widespread plant metal deficiency and decreased nitrogen fixation capabilities. As a result, renewed efforts have been undertaken to identify the mechanisms governing metal delivery from soil to the rhizobia, and to determine how metals are used in the nodule and how they are recycled once the nodule is no longer functional. This effort is being aided by improved legume molecular biology tools (genome projects, mutant collections, and transformation methods, in addition to state-of-the-art metal visualization systems.

  7. Hadamard Transforms

    CERN Document Server

    Agaian, Sos; Egiazarian, Karen; Astola, Jaakko

    2011-01-01

    The Hadamard matrix and Hadamard transform are fundamental problem-solving tools in a wide spectrum of scientific disciplines and technologies, such as communication systems, signal and image processing (signal representation, coding, filtering, recognition, and watermarking), digital logic (Boolean function analysis and synthesis), and fault-tolerant system design. Hadamard Transforms intends to bring together different topics concerning current developments in Hadamard matrices, transforms, and their applications. Each chapter begins with the basics of the theory, progresses to more advanced

  8. Contribución relativa del nitrógeno del suelo y del fijado biológicamente a la economía de la nutrición nitrogenada de maní (Arachis hypogaea L. en diferentes condiciones de fertilidad Relative contribution of biological fixed nitrogen and soil nitrogen to the nutrition economy of peanut (Arachis hypogaea L. under different conditions of soil fertility

    Directory of Open Access Journals (Sweden)

    S. Castro

    2006-12-01

    Full Text Available La producción de maní en Argentina se concentra en la región central de la provincia de Córdoba, la cual experimentó últimamente una pérdida importante de la productividad de los suelos y una declinación aleatoria del rendimiento de los cultivos. La contribución relativa de la fijación biológica (FBN de nitrógeno al maní en suelos de diferente fertilidad no ha sido suficientemente estudiada. Entonces, se evaluó el efecto de cepas de rizobios (TTOO2R, SEMIA 6144R y TAL 1000R sobre el rendimiento y el balance de nitrógeno de maní cultivado en suelos con alto y bajo contenido del nutriente. No hubo diferencias significativas en los parámetros simbióticos y de rendimiento del cultivo entre las cepas introducidas y las nativas, pero se observó una contribución relativa mayor de la FBN en el suelo con bajo contenido de nitrógeno (~58% de contribución que en el suelo con alto contenido (~27% de contribución. Esta comprobación del aporte relativo de la FBN asociada a la fertilidad del suelo, no registra antecedentes en la región central de Córdoba y debería recibir mayor consideración en el manejo del cultivo particularmente por su localización actual al sur de la provincia, donde los suelos presentan menores niveles de fertilidad. El rendimiento de maní confitería mostró mayores valores, si bien no significativos, con la inoculación en los 3 años del estudio.The peanut production in Argentina is concentrated in the central region of Córdoba province. At present, losses of soil fertility and a random decline peanut yield have been reported for this area. The relative contribution of biological nitrogen fixation (FBN in peanut plants cropped in soils with different fertility, has not been extensively studied. An experiment was carried out to determine the effects of rhizobia strains (TTOO2R, SEMIA 6144R and TAL 1000R on peanut crop yield and plant nitrogen balance under different conditions of soil nitrogen. The results

  9. Nitrogen-fixing bacteria in Mediterranean seagrass (Posidonia oceanica) roots

    KAUST Repository

    Garcias Bonet, Neus

    2016-03-09

    Biological nitrogen fixation by diazotrophic bacteria in seagrass rhizosphere and leaf epiphytic community is an important source of nitrogen required for plant growth. However, the presence of endophytic diazotrophs remains unclear in seagrass tissues. Here, we assess the presence, diversity and taxonomy of nitrogen-fixing bacteria within surface-sterilized roots of Posidonia oceanica. Moreover, we analyze the nitrogen isotopic signature of seagrass tissues in order to notice atmospheric nitrogen fixation. We detected nitrogen-fixing bacteria by nifH gene amplification in 13 out of the 78 roots sampled, corresponding to 9 locations out of 26 meadows. We detected two different types of bacterial nifH sequences associated with P. oceanica roots, which were closely related to sequences previously isolated from the rhizosphere of a salt marsh cord grass and a putative anaerobe. Nitrogen content of seagrass tissues showed low isotopic signatures in all the sampled meadows, pointing out the atmospheric origin of the assimilated nitrogen by seagrasses. However, this was not related with the presence of endophytic nitrogen fixers, suggesting the nitrogen fixation occurring in rhizosphere and in the epiphytic community could be an important source of nitrogen for P. oceanica. The low diversity of nitrogen-fixing bacteria reported here suggests species-specific relationships between diazotrophs and P. oceanica, revealing possible symbiotic interactions that could play a major role in nitrogen acquisition by seagrasses in oligotrophic environments where they form lush meadows.

  10. Utilization of nitrogen fixing trees

    Energy Technology Data Exchange (ETDEWEB)

    Brewbaker, J.L.; Beldt, R. van den; MacDicken, K.; Budowski, G.; Kass, D.C.L.; Russo, R.O.; Escalante, G.; Herrera, R.; Aranguren, J.; Arkcoll, D.B.; Doebereinger, J. (cord.)

    1983-01-01

    Six papers from the symposium are noted. Brewbaker, J.L., Beldt, R. van den, MacDicken, K. Fuelwood uses and properties of nitrogen-fixing trees, pp 193-204, (Refs. 15). Includes a list of 35 nitrogen-fixing trees of high fuelwood value. Budowski, G.; Kass, D.C.L.; Russo, R.O. Leguminous trees for shade, pp 205-222, (Refs. 68). Escalante, G., Herrera, R., Aranguren, J.; Nitrogen fixation in shade trees (Erythrina poeppigiana) in cocoa plantations in northern Venezuela, pp 223-230, (Refs. 13). Arkcoll, D.B.; Some leguminous trees providing useful fruits in the North of Brazil, pp 235-239, (Refs. 13). This paper deals with Parkia platycephala, Pentaclethra macroloba, Swartzia sp., Cassia leiandra, Hymenaea courbaril, dipteryz odorata, Inga edulis, I. macrophylla, and I. cinnamonea. Baggio, A.J.; Possibilities of the use of Gliricidia sepium in agroforestry systems in Brazil, pp 241-243; (Refs. 15). Seiffert, N.F.; Biological nitrogen and protein production of Leucaena cultivars grown to supplement the nutrition of ruminants, pp 245-249, (Refs. 14). Leucaena leucocephala cv. Peru, L. campina grande (L. leucocephala), and L. cunningham (L. leucocephalae) were promising for use as browse by beef cattle in central Brazil.

  11. Nitrogen and phosphorus intake by phytoplankton in the Xiamen Bay

    Institute of Scientific and Technical Information of China (English)

    林彩; 林辉; 贺青; 许焜灿; 吴省三; 张元标; 陈金民; 陈宝红; 林力斌; 卢美鸾; 陈维芬; 汤荣坤; 暨卫东

    2010-01-01

    This paper describes a time series experiment examining the nitrogen and phosphorus intake of natural phytoplankton communities by a microcosms approach.Seawater samples containing natural phytoplankton communities were collected from waters around Baozhu Islet in inner Xiamen Bay and around Qingyu Islet in the outer bay.The goal was to elucidate the relationship between phytoplankton population enhancement,the biological removal of nitrogen and phosphorus from the seawater,and the phytoplankton nitrogen an...

  12. Reduction of forest soil respiration in response to nitrogen deposition

    OpenAIRE

    I. A. Janssens; Dieleman, W.; S. Luyssaert; Subke, J-A.; M. Reichstein; Ceulemans, R; Ciais, P; Dolman, A.J.; J. Grace; Matteucci, G.; Papale, D.; S. L. Piao; Schulze, E-D.; Tang, J.; Law, B.E.

    2010-01-01

    International audience; The use of fossil fuels and fertilizers has increased the amount of biologically reactive nitrogen in the atmosphere over the past century. As a consequence, forests in industrialized regions have experienced greater rates of nitrogen deposition in recent decades. This unintended fertilization has stimulated forest growth, but has also affected soil microbial activity, and thus the recycling of soil carbon and nutrients. A meta-analysis suggests that nitrogen depositio...

  13. Standard biological parts knowledgebase.

    Science.gov (United States)

    Galdzicki, Michal; Rodriguez, Cesar; Chandran, Deepak; Sauro, Herbert M; Gennari, John H

    2011-02-24

    We have created the Knowledgebase of Standard Biological Parts (SBPkb) as a publically accessible Semantic Web resource for synthetic biology (sbolstandard.org). The SBPkb allows researchers to query and retrieve standard biological parts for research and use in synthetic biology. Its initial version includes all of the information about parts stored in the Registry of Standard Biological Parts (partsregistry.org). SBPkb transforms this information so that it is computable, using our semantic framework for synthetic biology parts. This framework, known as SBOL-semantic, was built as part of the Synthetic Biology Open Language (SBOL), a project of the Synthetic Biology Data Exchange Group. SBOL-semantic represents commonly used synthetic biology entities, and its purpose is to improve the distribution and exchange of descriptions of biological parts. In this paper, we describe the data, our methods for transformation to SBPkb, and finally, we demonstrate the value of our knowledgebase with a set of sample queries. We use RDF technology and SPARQL queries to retrieve candidate "promoter" parts that are known to be both negatively and positively regulated. This method provides new web based data access to perform searches for parts that are not currently possible.

  14. Standard biological parts knowledgebase.

    Directory of Open Access Journals (Sweden)

    Michal Galdzicki

    Full Text Available We have created the Knowledgebase of Standard Biological Parts (SBPkb as a publically accessible Semantic Web resource for synthetic biology (sbolstandard.org. The SBPkb allows researchers to query and retrieve standard biological parts for research and use in synthetic biology. Its initial version includes all of the information about parts stored in the Registry of Standard Biological Parts (partsregistry.org. SBPkb transforms this information so that it is computable, using our semantic framework for synthetic biology parts. This framework, known as SBOL-semantic, was built as part of the Synthetic Biology Open Language (SBOL, a project of the Synthetic Biology Data Exchange Group. SBOL-semantic represents commonly used synthetic biology entities, and its purpose is to improve the distribution and exchange of descriptions of biological parts. In this paper, we describe the data, our methods for transformation to SBPkb, and finally, we demonstrate the value of our knowledgebase with a set of sample queries. We use RDF technology and SPARQL queries to retrieve candidate "promoter" parts that are known to be both negatively and positively regulated. This method provides new web based data access to perform searches for parts that are not currently possible.

  15. 小麦蚕豆间作对根际土壤氮转化微生物的影响%Effects of Wheat and Faba Bean Intercropping on Microorganism Involved in Nitrogen Transformation in the Rhizosphere Soils

    Institute of Scientific and Technical Information of China (English)

    唐艳芬; 续勇波; 郑毅; 雷宝坤

    2016-01-01

    Soil microorganism is one of the key factors that affects soil ecological activity. It is an important symbol of soil health, and the soil nitrogen cycle is closely related to the microorganisms. The relationship between nitrogen and microorganisms under the intercropping is im-portant for the farmland ecosystem. In this paper, phospholipid fatty acids(PLFA)analysis was used to determine soil microbial communi-ties, e.g., biomasses of anaerobic bacteria, aerobic bacteria, bacteria, fungi and actinobacteria. The abundance of nitrifying genes(AOB, AOA)and three denitrifying genes(nirK, norB, nosZ)were measured using real-time quantitative polymerase chain reaction. The enzymes, nitrate and ammonium concentrations were measured using conventional methods. The results showed that along with the growth period, the TPLFAs(total phospholipid fatty acids)increased and the bacterias, fungus, actinomyces and aerobic bacterias significantly(P<0.05)dif-fered between intercropping and monoculture. The greater abundance of AOB than AOA and the variation range of 105~106 were observed in all samples. The gene copies of norB and nosZ were pronounced by intercropping in the rhizosphere of faba bean at elongation and heading stages, respectively. The abundance of nirK remarkably(P<0.05)differed between intercropping and monoculture. In intercropping rhizo-sphere, the contents of NO-3-N were lower than monoculture, while the NH+4-N contents were converse(P<0.05). Conclusively, wheat and fa-ba bean intercropping system could change rhizosphere microenvironment, and then the microbial community structure in the soils , which would facilitate the conservation and supplying of soil nitrogen and reduce the nitrogen loss and pollution under the intercropping conditions to some extent. This might be the nitrogen nutrition mechanism for the overyielding of wheat and faba bean intercropping system.%通过田间小区试验,采用磷脂脂肪酸(PLFA)、实时荧光定量PCR研究了

  16. Simulation of Soil-Plant Nitrogen Interactions for Educational Purposes.

    Science.gov (United States)

    Huck, M. G.; Hoeft, R. G.

    1994-01-01

    Describes a computer model characterizing the balance of soil-plant Nitrogen that allows students to see the likely consequences of different biological and weather-related parameters. Proposes three uses for the model: (1) orienting beginning students to understand the soil Nitrogen cycle; (2) providing information for advanced students; and (3)…

  17. Organelle transformation.

    Science.gov (United States)

    Bhattacharya, Anjanabha; Kumar, Anish; Desai, Nirali; Parikh, Seema

    2012-01-01

    The source of genetic information in a plant cell is contained in nucleus, plastids, and mitochondria. Organelle transformation is getting a lot of attention nowadays because of its superior performance over the conventional and most commonly used nuclear transformation for obtaining transgenic lines. Absence of gene silencing, strong predictable transgene expression, and its application in molecular pharming, both in pharmaceutical and nutraceuticals, are some of many advantages. Other important benefits of utilizing this technology include the absence of transgene flow, as organelles are maternally inherited. This may increase the acceptability of organelle transformation technology in the development of transgenic crops in a wider scale all over the globe. As the need for crop productivity and therapeutic compounds increases, organelle transformation may be able to bridge the gap, thereby having a definite promise for the future.

  18. Visualizing Transformation

    DEFF Research Database (Denmark)

    Pedersen, Pia

    2012-01-01

    Transformation, defined as the step of extracting, arranging and simplifying data into visual form (M. Neurath, 1974), was developed in connection with ISOTYPE (International System Of TYpographic Picture Education) and might well be the most important legacy of Isotype to the field of graphic...... design. Recently transformation has attracted renewed interest because of the book ‘The Transformer’ written by Robin Kinross and Marie Neurath. My on-going research project, summarized in this paper, identifies and depicts the essential principles of data visualization underlying the process...... of transformation with reference to Marie Neurath’s sketches on the Bilston Project. The material has been collected at the Otto and Marie Neurath Collection housed at the University of Reading, UK. By using data visualization as a research method to look directly into the process of transformation the project...

  19. Transformational leadership.

    Science.gov (United States)

    Luzinski, Craig

    2011-12-01

    This month, the director of the Magnet Recognition Program® takes an in-depth look at the Magnet® model component transformational leadership. The author examines the expectations for Magnet organizations around this component. What are the qualities that make a nursing leader truly transformational, and what is the best approach to successfully lead a healthcare organization through today's volatile healthcare environment?

  20. Landskabets transformation

    DEFF Research Database (Denmark)

    Munck Petersen, Rikke

    2005-01-01

    Seminaroplæg fra forskere. Faglige seminarer på KA, forår 2005. Belyser transformation af det danske landskab fysisk som holdningsmæssigt, samt hvordan phd-arbejdets egen proces håndterer den.......Seminaroplæg fra forskere. Faglige seminarer på KA, forår 2005. Belyser transformation af det danske landskab fysisk som holdningsmæssigt, samt hvordan phd-arbejdets egen proces håndterer den....

  1. Enhanced detectability of fluorinated derivatives of N,N-dialkylamino alcohols and precursors of nitrogen mustards by gas chromatography coupled to Fourier transform infrared spectroscopy analysis for verification of chemical weapons convention.

    Science.gov (United States)

    Garg, Prabhat; Purohit, Ajay; Tak, Vijay K; Dubey, D K

    2009-11-06

    N,N-Dialkylamino alcohols, N-methyldiethanolamine, N-ethyldiethanolamine and triethanolamine are the precursors of VX type nerve agents and three different nitrogen mustards respectively. Their detection and identification is of paramount importance for verification analysis of chemical weapons convention. GC-FTIR is used as complimentary technique to GC-MS analysis for identification of these analytes. One constraint of GC-FTIR, its low sensitivity, was overcome by converting the analytes to their fluorinated derivatives. Owing to high absorptivity in IR region, these derivatives facilitated their detection by GC-FTIR analysis. Derivatizing reagents having trimethylsilyl, trifluoroacyl and heptafluorobutyryl groups on imidazole moiety were screened. Derivatives formed there were analyzed by GC-FTIR quantitatively. Of these reagents studied, heptafluorobutyrylimidazole (HFBI) produced the greatest increase in sensitivity by GC-FTIR detection. 60-125 folds of sensitivity enhancement were observed for the analytes by HFBI derivatization. Absorbance due to various functional groups responsible for enhanced sensitivity were compared by determining their corresponding relative molar extinction coefficients ( [Formula: see text] ) considering uniform optical path length. The RSDs for intraday repeatability and interday reproducibility for various derivatives were 0.2-1.1% and 0.3-1.8%. Limit of detection (LOD) was achieved up to 10-15ng and applicability of the method was tested with unknown samples obtained in international proficiency tests.

  2. 污泥固体停留时间对实时控制生物脱氮SBR中亚硝酸盐积累的影响%Effect of Sludge Retention Time on Nitrite Accumulation in Real-time Control Biological Nitrogen Removal Sequencing Batch Reactor

    Institute of Scientific and Technical Information of China (English)

    吴昌永; 彭永臻; 王淑莹; 李晓玲; 王然登

    2011-01-01

    In this study, four sequencing batch reactors (SBR), with the sludge retention time (SRT) of 5, 10, 20and 40 d, were used to treat domestic wastewater, and the effect of SRT on nitrite accumulation in the biological nitrogen removal SBR was investigated. The real-time control strategy based on online parameters, such as pH, dissolved oxygen (DO) and oxidation reduction potential (ORP), was used to regulate the nitrite accumulation in SBR.The model-based simulation and experimental results showed that with the increase of SRT, longer time was needed to achieve high level of nitritation. In addition, the nitrite accumulation rate (NAR) was higher when the SRT was relatively shorter during a 112-day operation. When the SRT was 5 d, the system was unstable with the mixed liquor suspended solids (MLSS) decreased day after day. When the SRT was 40 d, the nitrification process was significantly inhibited. SRT of 10 to 20 d was more suitable in this study. The real-time control strategy combined with SRT control in SBR is an effective method for biological nitrogen removal via nitrite from wastewater.

  3. Deconvolution Method for Determination of the Nitrogen Content in Cellulose Carbamates

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Cellulose carbamates (CC) were synthesized with microcrystalline cellulose as raw materials. The Fourier transform infrared spectra of CC with different nitrogen content were recorded. The accurate results of the nitrogen content for CC can be obtained by using the deconvolution method when the nitrogen content is less than 3.5%. The relationship between the nitrogen content and the absorption intensity ratio of the corresponding separated absorption peaks in FTIR spectra has been expressed by an equation precisely.

  4. Identification and quantification of nitrogen cycling processes in cryptogamic covers

    Science.gov (United States)

    Weber, Bettina; Wu, Dianming; Lenhart, Katharina; Tamm, Alexandra; Ruckteschler, Nina; Rodríguez-Caballero, Emilio; Elbert, Wolfgang; Burrows, Susannah; Clough, Tim; Steinkamp, Jörg; Meusel, Hannah; Behrendt, Thomas; Büdel, Burkhard; Andreae, Meinrat O.; Sörgel, Matthias; Cheng, Yafang; Crutzen, Paul; Keppler, Frank; Su, Hang; Pöschl, Ulrich

    2016-04-01

    Cryptogamic covers (CC) comprise communities of photoautotrophic cyanobacteria, lichens, algae, and bryophytes together with heterotrophic bacteria, microfungi, and archaea in varying proportions. Depending on their habitat, cryptogamic rock covers, cryptogamic plant covers, and cryptogamic soil covers are distinguished. The latter comprise biological soil crusts (biocrusts), which globally occur under dryland conditions. In a first assessment of their global role, we quantified that CC fix ˜49 Tg of nitrogen (N) per year (Elbert et al., 2013), corresponding to ˜1/2 of the maximum terrestrial biological N fixation determined in the latest IPCC report. The fixed N is used for biomass formation and partially leached into the ground, where it can be taken up by plants or transformed into N oxides, being emitted into the atmosphere. We show that biocrusts release nitric oxide (NO) and nitrous acid (HONO), which are key species in the global cycling of nitrogen and in the production of ozone and hydroxyl radicals, regulating the oxidizing power and self-cleaning capacity of the atmosphere. Based on laboratory, field and satellite measurement data, we obtained a best estimate of 1.1 Tg a-1 of NO-N and 0.6 Tg a-1 of HONO-N being globally emitted by biocrusts, corresponding to ˜20% of the global nitrogen oxide emissions from soils under natural vegetation (Weber et al., 2015). During full wetting and drying cycles, emissions peaked at low water contents suggesting NO- and HONO-formation under aerobic conditions during nitrification. Other measurements revealed that cryptogamic organisms release nitrous oxide (N2O), a greenhouse gas of crucial importance for climate change. The emission rates varied with temperature, humidity, and N deposition, but divided by respiratory CO2 emission they formed an almost constant ratio, which allowed upscaling on the global scale. We estimated annual N2O emissions of 0.3 - 0.6 Tg by cryptogams, accounting for 4-9% of the global N2O

  5. Study on the biological denitrification of ammonia-containing wastewater from the nitrogenous fertilizer plants%氮肥厂含氨废水的生物脱氮研究

    Institute of Scientific and Technical Information of China (English)

    高会杰; 孙丹凤; 张鹏; 李志瑞

    2012-01-01

    The high ammonia nitrogen wastewater from nitrogenous fertilizer plants has been treated by enriched and cultured nitrifying and denitrifying bacteria. The changing characteristics of pH is investigated in batch culture experiments,and the effects of NH3-N loading on the nitration result are studied. The results show that nitrifying bacteria can adapt to high pH wastewater and remove NH3-N efficiently. Its highest NH3-N removing rate is 36.07 mg/(L·h),when it runs continuously, the HRT of nitrification is 24 h,influent NH3-N loading is between 0.387-0.667 kg/(m3·d). The ammonia-nitrogen removing rate is higher than 97% after the system has been operated stably, the nitrification rate is about 80% and total nitrogen removing rate is higher than 90%.%采用富集驯化的亚硝酸菌和亚硝酸型反硝化菌对氮肥厂高氨氮废水进行处理.考察了pH的变化特征,研究了进水氨氮负荷对硝化效果的影响.实验结果表明,硝化菌能够耐受高pH废水并能高效脱氮,氨氮去除速率最高达36.07 mg/(L·h);连续运行时水力停留时间24h,进水NH3-N负荷在0.387~0.667 kg/(m3·d)范围内,稳定运行后硝化出水氨氮去除率大于97%,亚硝化率为80%左右,总氮去除率达90%以上.

  6. Nitrification Inhibitor on Urea-nitrogen Transformation and the Impact of Soil%不同硝化抑制剂的复配施用对尿素转化及土壤中氮的影响

    Institute of Scientific and Technical Information of China (English)

    傅丽; 石元亮; 苏壮; 王玲莉

    2011-01-01

    Urease inhibitors and nitrification inhibitors are used for slowing the hydrolysis of urea and ammonium nitrogen of soil to sell the conversion of N.In this experiment,brown earth was used as a substrate,in the same amount of urease inhibitor,under simulated field cultivation experiments conducted outdoors.The results showed that the application of nitrification inhibitors significantly inhibited the NH4+-N to NO3——N conversion of CMP with the nitrification inhibitor DCD fertilizer effect most significantly.Followed by nitrification inhibitor CMP with significant inhibition rate of 35.6%;ATC here showed no significant effect,but there were also some inhibitory effect.%通过室外模拟田间培养试验,研究不同硝化抑制剂及其复配后的硝化抑制效果。结果表明:不同硝化抑制剂,明显抑制了NH4^+-N向NO3^--N的转化。硝化抑制剂1-甲胺酰基-3,5-二甲基吡唑(CMP)有明显的抑制效果,优于4氨基-1,2,4-三唑盐酸盐(ATC)、双氰胺(DCD);硝化抑制剂CMP与DCD复配的抑制效果显著,硝化抑制率为35.6%。为了结合生产实际获得最优性价比,在硝化抑制剂复配比率方面尚需进一步研究。

  7. Climate change induces shifts in abundance and activity pattern of bacteria and archaea catalyzing major transformation steps in nitrogen turnover in a soil from a mid-European beech forest.

    Directory of Open Access Journals (Sweden)

    Silvia Gschwendtner

    Full Text Available Ongoing climate change will lead to more extreme weather events, including severe drought periods and intense drying rewetting cycles. This will directly influence microbial nitrogen (N turnover rates in soil by changing the water content and the oxygen partial pressure. Therefore, a space for time climate change experiment was conducted by transferring intact beech seedling-soil mesocosms from a northwest (NW exposed site, representing today's climatic conditions, to a southwest (SW exposed site, providing a model climate for future conditions with naturally occurring increased soil temperature (+0.8°C in average. In addition, severe drought and intense rainfall was simulated by a rainout shelter at SW and manual rewetting after 39 days drought, respectively. Soil samples were taken in June, at the end of the drought period (August, 24 and 72 hours after rewetting (August and after a regeneration period of four weeks (September. To follow dynamics of bacterial and archaeal communities involved in N turnover, abundance and activity of nitrifiers, denitrifiers, N2-fixing microbes and N-mineralizers was analyzed based on marker genes and the related transcripts by qPCR from DNA and RNA directly extracted from soil. Abundance of the transcripts was reduced under climate change with most pronounced effects for denitrification. Our results revealed that already a transfer from NW to SW without further treatment resulted in decreased cnor and nosZ transcripts, encoding for nitric oxide reductase and nitrous oxide reductase, respectively, while nirK transcripts, encoding for nitrite reductase, remained unaffected. Severe drought additionally led to reduced nirK and cnor transcripts at SW. After rewetting, nirK transcripts increased rapidly at both sites, while cnor and nosZ transcripts increased only at NW. Our data indicate that the climate change influences activity pattern of microbial communities involved in denitrification processes to a

  8. Climate change induces shifts in abundance and activity pattern of bacteria and archaea catalyzing major transformation steps in nitrogen turnover in a soil from a mid-European beech forest.

    Science.gov (United States)

    Gschwendtner, Silvia; Tejedor, Javier; Bimüller, Carolin; Bimueller, Carolin; Dannenmann, Michael; Kögel-Knabner, Ingrid; Knabner, Ingrid Kögel; Schloter, Michael

    2014-01-01

    Ongoing climate change will lead to more extreme weather events, including severe drought periods and intense drying rewetting cycles. This will directly influence microbial nitrogen (N) turnover rates in soil by changing the water content and the oxygen partial pressure. Therefore, a space for time climate change experiment was conducted by transferring intact beech seedling-soil mesocosms from a northwest (NW) exposed site, representing today's climatic conditions, to a southwest (SW) exposed site, providing a model climate for future conditions with naturally occurring increased soil temperature (+0.8°C in average). In addition, severe drought and intense rainfall was simulated by a rainout shelter at SW and manual rewetting after 39 days drought, respectively. Soil samples were taken in June, at the end of the drought period (August), 24 and 72 hours after rewetting (August) and after a regeneration period of four weeks (September). To follow dynamics of bacterial and archaeal communities involved in N turnover, abundance and activity of nitrifiers, denitrifiers, N2-fixing microbes and N-mineralizers was analyzed based on marker genes and the related transcripts by qPCR from DNA and RNA directly extracted from soil. Abundance of the transcripts was reduced under climate change with most pronounced effects for denitrification. Our results revealed that already a transfer from NW to SW without further treatment resulted in decreased cnor and nosZ transcripts, encoding for nitric oxide reductase and nitrous oxide reductase, respectively, while nirK transcripts, encoding for nitrite reductase, remained unaffected. Severe drought additionally led to reduced nirK and cnor transcripts at SW. After rewetting, nirK transcripts increased rapidly at both sites, while cnor and nosZ transcripts increased only at NW. Our data indicate that the climate change influences activity pattern of microbial communities involved in denitrification processes to a different extend

  9. Microbiological transformations of phosphorus and sulphur compounds in acid soils

    Directory of Open Access Journals (Sweden)

    Stamenov Dragana

    2012-01-01

    Full Text Available The dynamics of phosphorus and sulphur in soil is closely related to the dynamics of the biological cycle in which microorganisms play a central role. There is not much microbiological activity in acid soils because aerobes are scarce, rhizosphere is restricted to the shallow surface layer, and the biomass of microorganisms decreases with higher acidity. The aim of the research was to investigate the number of microorganisms, which decompose organic and inorganic phosphorus compounds and organic sulphur compounds in calcocambisol, luvisol, and pseudogley. The following parameters were determined in the soil samples: pH in H2O and in 1MKCl; the content of CaCO3 (%; humus content (%, nitrogen content (%; the content of physiologically active phosphorus and potassium (mg P2O5/100g of soil; mg K2O/100g of soil. The number of microorganisms was determined by the method of agar plates on appropriate nutrient media: the number of microorganisms solubilizing phosphates on a medium by Muramcov; the number of microorganisms that decompose organic phosphorus compounds on a medium with lecithin; and the number of microorganisms that transform organic sulphur compounds on a medium by Baar. All three types of soil are acid non-carbonate soils with a low level of available phosphorus and a more favorable amount of potassium, nitrogen, and humus. The largest number of bacteria, which transform organic phosphorus compounds, was found in calcocambisol. The largest number of phosphate solubilizing bacteria was recorded in pseudogley, whereas the largest number of phosphate solubilizing fungi was recorded in calcocambisol. The largest number of bacteria, which transform organic sulphur compounds, was recorded in pseudogley.

  10. Estimated Historical and Current Nitrogen Balances for Illinois

    Directory of Open Access Journals (Sweden)

    Mark B. David

    2001-01-01

    Full Text Available The Midwest has large riverine exports of nitrogen (N, with the largest flux per unit area to the Mississippi River system coming from Iowa and Illinois. We used historic and current data to estimate N inputs, outputs, and transformations for Illinois where human activity (principally agriculture and associated landscape drainage have had a dominant impact. Presently, ~800,000 Mg of N is added each year as fertilizer and another 420,000 Mg is biologically fixed, primarily by soybean (Glycine max L. Merr.. These annual inputs are greater than exports in grain, which results in surplus N throughout the landscape. Rivers within the state export approximately 50% of this surplus N, mostly as nitrate, and the remainder appears to be denitrified or temporarily incorporated into the soil organic matter pool. The magnitude of N losses for 1880, 1910, 1950, and 1990 are compared. Initial cultivation of the prairies released large quantities of N (~500,000 Mg N year�1, and resulted in riverine N transport during the late 19th century that appears to have been on the same order of magnitude as contemporary N losses. Riverine flux was estimated to have been at a minimum in about 1950, due to diminished net mineralization and low fertilizer inputs. Residual fertilizer N from corn (Zea mays L., biological N fixed by soybean, short-circuiting of soil water through artificial drainage, and decreased cropping-system diversity appear to be the primary sources for current N export.

  11. Systems biology, emergence and antireductionism.

    Science.gov (United States)

    Kesić, Srdjan

    2016-09-01

    This study explores the conceptual history of systems biology and its impact on philosophical and scientific conceptions of reductionism, antireductionism and emergence. Development of systems biology at the beginning of 21st century transformed biological science. Systems biology is a new holistic approach or strategy how to research biological organisms, developed through three phases. The first phase was completed when molecular biology transformed into systems molecular biology. Prior to the second phase, convergence between applied general systems theory and nonlinear dynamics took place, hence allowing the formation of systems mathematical biology. The second phase happened when systems molecular biology and systems mathematical biology, together, were applied for analysis of biological data. Finally, after successful application in science, medicine and biotechnology, the process of the formation of modern systems biology was completed. Systems and molecular reductionist views on organisms were completely opposed to each other. Implications of systems and molecular biology on reductionist-antireductionist debate were quite different. The analysis of reductionism, antireductionism and emergence issues, in the era of systems biology, revealed the hierarchy between methodological, epistemological and ontological antireductionism. Primarily, methodological antireductionism followed from the systems biology. Only after, epistemological and ontological antireductionism could be supported.

  12. The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571

    DEFF Research Database (Denmark)

    Lee, KB; De Backer, P; Aono, T;

    2008-01-01

    BACKGROUND: Biological nitrogen fixation is a prokaryotic process that plays an essential role in the global nitrogen cycle. Azorhizobium caulinodans ORS571 has the dual capacity to fix nitrogen both as free-living organism and in a symbiotic interaction with Sesbania rostrata. The host is a fast...

  13. A Mathematic Approach to Nitrogen Fixation Through Earth History

    Science.gov (United States)

    Delgado-Bonal, Alfonso; Martín-Torres, F. Javier

    Nitrogen is essential for life as we know it. According to phylogenetic studies, all organisms capable of fixing nitrogen are prokaryotes, both bacteria and archaea, suggesting that nitrogen fixation and ammonium assimilation were metabolic features of the Last Universal Common Ancestor of all organisms. At present time the amount of biologically fixed nitrogen is around 2 × 1{0}^{13} g/year (Falkowski 1997), an amount much larger than the corresponding to the nitrogen fixed abiotically (between 2. 6 ×109 and 3 × 1{0}^{11} g/year) (Navarro-González et al. 2001). The current amount of nitrogen fixed is much higher than it was on Earth before the Cambrian explosion, where the symbiotic associations with leguminous plants, the major nitrogen fixer currently, did not exist and nitrogen was fixed only by free-living organisms as cyanobacteria. It has been suggested (Navarro-González et al. 2001) that abiotic sources of nitrogen fixation during Early Earth times could have an important role triggering a selection pressure favoring the evolution of nitrogenase and an increase in the nitrogen fixation rate. In this study we present briefly a method to analyze the amount of fixed nitrogen, both biotic and abiotic, through Earth's history.

  14. Nitrogen cycle in microbial mats: completely unknown?

    Science.gov (United States)

    Coban, O.; Bebout, B.

    2015-12-01

    Microbial mats are thought to have originated around 3.7 billion years ago, most likely in the areas around submarine hydrothermal vents, which supplied a source of energy in the form of reduced chemical species from the Earth's interior. Active hydrothermal vents are also believed to exist on Jupiter's moon Europa, Saturn's moon Enceladus, and on Mars, earlier in that planet's history. Microbial mats have been an important force in the maintenance of Earth's ecosystems and the first photosynthesis was also originated there. Microbial mats are believed to exhibit most, if not all, biogeochemical processes that exist in aquatic ecosystems, due to the presence of different physiological groups of microorganisms therein. While most microbially mediated biogeochemical transformations have been shown to occur within microbial mats, the nitrogen cycle in the microbial mats has received very little study in spite of the fact that nitrogen usually limits growth in marine environments. We will present the first results in the determination of a complete nitrogen budget for a photosynthetic microbial mat. Both in situ sources and sinks of nitrogen in photosynthetic microbial mats are being measured using stable isotope techniques. Our work has a particular focus on recently described, but poorly understood, processes, e.g., anammox and dissimilatory nitrate reduction, and an emphasis on understanding the role that nitrogen cycling may play in generating biogenic nitrogen isotopic signatures and biomarker molecules. Measurements of environmental controls on nitrogen cycling should offer insight into the nature of co-evolution of these microbial communities and their planets of origin. Identifying the spatial (microscale) as well as temporal (diel and seasonal) distribution of nitrogen transformations, e.g., rates of nitrification and denitrification, within mats, particularly with respect to the distribution of photosynthetically-produced oxygen, is anticipated. The results

  15. 7th Annual Systems Biology Symposium: Systems Biology and Engineering

    Energy Technology Data Exchange (ETDEWEB)

    Galitski, Timothy P.

    2008-04-01

    Systems biology recognizes the complex multi-scale organization of biological systems, from molecules to ecosystems. The International Symposium on Systems Biology has been hosted by the Institute for Systems Biology in Seattle, Washington, since 2002. The annual two-day event gathers the most influential researchers transforming biology into an integrative discipline investingating complex systems. Engineering and application of new technology is a central element of systems biology. Genome-scale, or very small-scale, biological questions drive the enigneering of new technologies, which enable new modes of experimentation and computational analysis, leading to new biological insights and questions. Concepts and analytical methods in engineering are now finding direct applications in biology. Therefore, the 2008 Symposium, funded in partnership with the Department of Energy, featured global leaders in "Systems Biology and Engineering."

  16. 转DREB基因大豆东农50对土壤氮素转化菌数量及生化强度的影响%Effect of Transgenic Soybean "Dongnong 50" with DREB Gene on Number of Soil Nitrogen Transforming Bacteria and Biochemical Intensity

    Institute of Scientific and Technical Information of China (English)

    董蕾; 任广明; 陈宝; 金羽; 曲娟娟

    2011-01-01

    In this study,the transgenic soybean "Dongnong 50" and soybean "Dongnong 50" were planted under normal soil water condition and drought stress condition to study transgenic soybean' s effect on the amount of nitrogen transforming bacteria and their corresponding biochemical intensity. The results showed that the number of aerobic azotobacter and the intensity of nitrogen fixation increased in the rhizosphere of transgenic soybean under drought stress treatment at the flowering stage. The number of the ammonification bacteria and the intensity of am-monification decreased while the number of denitrifying bacteria and the intensity of denitrification decreased. The number of the nitrifying bacteria and the intensity of nitrification were not affected during the whole growth period.%通过盆栽试验对转DREB基因大豆东农50与非转基因大豆东农50进行正常水分处理和干旱胁迫处理,研究转基因大豆在干旱条件下对土壤氮素转化相关细菌数量及生化强度的影响.结果表明,干旱条件下转DREB基因大豆在开花期对根际好氧性自生固氮茵的生长及土壤固氮强度有促进作用,在开花期和结荚鼓粒期对氨化细菌繁殖及氨化强度有抑制作用,在此时期对反硝化细菌的生长繁殖及其强度有抑制作用,在整个生长周期内转基因大豆对硝化细菌数量及其强度没有影响.

  17. Studies on nitrogen retention in growing pigs

    DEFF Research Database (Denmark)

    Thorbek, G; Henckel, S; Chwalibog, André;

    1987-01-01

    Nitrogen retention (RN) was measured in 60 barrows of Danish Landrace and a total of 470 balance periods was carried out during the growth period from 20 to 85 kg live weight. In the first serie (Expt A) six different feed compounds of high biological value (HBV) were fed to 48 barrows, while...... in the second serie (Expt B) 12 barrows were measured on feed compounds of HBV or low biological value (LBV). Three different levels of gross energy were used in Expt B. Individual differences of 10-20% in the pigs capability for nitrogen retention were observed. Nitrogen retention increased from 12 to 21 g N....../d on the HBV-compounds and was not influenced by increasing nitrogen or energy intake. Nitrogen retention was curvilinear in relation to metabolic live weight (kg0.75) in both series. A parabolic function on kg0.75 gave the best fit to the data with the following regression equations: Expt A + B: RN, g/d = 1...

  18. Cambios biológicos en suelos fertilizados con nitrógeno cultivados con manzano en el Alto Valle de Río Negro Biological changes in nitrogen fertilized soil of apple orchards in the Alto Valle of Rio Negro

    Directory of Open Access Journals (Sweden)

    Perla Gili

    2009-12-01

    activity and edaphic properties. Nitrate content, total nitrogen, organic carbon, microbial biomass carbon, deshidrogenase and catalase activity were determined and the carbon mineralization index, the proportion of microbial biomass carbon in organic carbon and the metabolic coefficient (qCO2 were calculated. Nitrogen was applied as ammonium nitrate (NH4NO3 at two rates, 100 (N1 and 200 kg N ha-¹ (N2, and on two times, 50% at petal fall (October and the rest at harvest (March, and the results compared with a control treatment without N (N0. The experiment was repeated over two growing seasons, 2005-2006 and 2006-2007. Soil samples were taken before and after each fertilization. Nitrogen addition had differential effects on soils chemical and biological properties depending on the season and plant phenology. In autumn and spring, soil nitrates (NO3 - increased significantly and soil biota was modified during both growing seasons. In the 2005-2006 season, spring nitrogen additions increased soil biota activity in terms of C-BM, RE and Dh-asa; whereas in the second growing season, 2006-2007, nitrogen addition had no effect on soil chemical and biological properties. Soil biological activity was affected by orchard management practices, fertilization and pruning.

  19. Tracking Nonpoint Source Nitrogen and Carbon in Watersheds of Chesapeake Bay

    Science.gov (United States)

    Kaushal, S.; Pennino, M. J.; Duan, S.; Blomquist, J.

    2012-12-01

    Humans have altered nitrogen and carbon cycles in rivers regionally with important impacts on coastal ecosystems. Nonpoint source nitrogen pollution is a leading contributor to coastal eutrophication and hypoxia. Shifts in sources of carbon impact downstream ecosystem metabolism and fate and transport of contaminants in coastal zones. We used a combination of stable isotopes and optical tracers to investigate fate and transport of nitrogen and carbon sources in tributaries of the largest estuary in the U.S., the Chesapeake Bay. We analyzed isotopic composition of water samples from major tributaries including the Potomac River, Susquehanna River, Patuxent River, and Choptank River during routine and storm event sampling over multiple years. A positive correlation between δ15N-NO3- and δ18O-NO3- in the Potomac River above Washington D.C. suggested denitrification or biological uptake in the watershed was removing agriculturally-derived N during summer months. In contrast, the Patuxent River in Maryland showed elevated δ15N-NO3- (5 - 12 per mil) with no relationship to δ18O-NO3- suggesting the importance of wastewater sources. From the perspective of carbon sources, there were distinct isotopic values of the δ13C-POM of particulate organic matter and fluorescence excitation emission matrices (EEMS) for rivers influenced by their dominant watershed land use. EEMS showed that there were increases in the humic and fulvic fractions of dissolved organic matter during spring floods, particularly in the Potomac River. Stable isotopic values of δ13C-POM also showed rapid depletion suggesting terrestrial carbon "pulses" in the Potomac River each spring. The δ15N-POM peaked to 10 - 15 per mil each spring suggested a potential manure source or result of biological processing within the watershed. Overall, there were considerable changes in sources and transformations of nitrogen and carbon that varied across rivers and that contribute to nitrogen and carbon loads

  20. Effects of Manure Fertilizer and Chemical Fertilizer on Nitrogen Transformation Bacteria and Soil Enzyme in Black Soil%农肥和化肥对黑土氮素转化功能菌和土壤酶的影响

    Institute of Scientific and Technical Information of China (English)

    于佳; 王宏燕; 赵伟; 宋立娟

    2011-01-01

    Various trends of soil function bacteria and its activity was Analyzed under different ratios of the manure and chemical fertilizers,in on the black soil field under maize. The results showed that the high manure fertilizer ratio scenario leads to an increase in ammonification bacteria and nitrobacteria, which were 2. 22 times and 4. 09 times of standard sample (CK) respectively. Meanwhile, the high chemical fertilizer ratio also contributed to a significant raise in the amount of denitrifying bacteria, which was 8.49 times of CK.Furthermore, Manure fertilizer scenario had a positive influence on soil microbial biomass carbon, nitrogen, soil urease and catalase as the analyzed data of activities of these factors were much higher than that of CK. Specifically speaking, the positive correlations existed in the following groups: soil microbial biomass C and soil urease activity, microbial biomass N and catalyse activity and microbial biomass and soil ammonification bacteria as well At the same time, soil microbial biomass C and soil ammonification bacteria had significant negative correlation ship.%实验以玉米田黑土为研究对象,主要研究土壤氮素转化功能菌及其活性在不同施入量农肥和化肥处理下的变化.结果表明:农肥高量处理使土壤氨化细菌和硝化细菌数量升高,分别是对照的2.22倍和4.09倍,而化肥高量处理使反硝化细菌数量明显增加,是对照的8.49倍;农肥处理对土壤微生物量碳、微生物量氮、土壤脲酶和土壤过氧化氢酶有促进作用,其活性明显高于对照.相关分析表明,土壤微生物量碳与土壤脲酶,土壤微生物量氮与过氧化氢酶和土壤氨化细菌之间均存在着极显著的正相关关系,而土壤微生物量碳与土壤氨化细菌之间存在着极显著的负相关关系.图8,表1,参14.

  1. Computational systems chemical biology.

    Science.gov (United States)

    Oprea, Tudor I; May, Elebeoba E; Leitão, Andrei; Tropsha, Alexander

    2011-01-01

    There is a critical need for improving the level of chemistry awareness in systems biology. The data and information related to modulation of genes and proteins by small molecules continue to accumulate at the same time as simulation tools in systems biology and whole body physiologically based pharmacokinetics (PBPK) continue to evolve. We called this emerging area at the interface between chemical biology and systems biology systems chemical biology (SCB) (Nat Chem Biol 3: 447-450, 2007).The overarching goal of computational SCB is to develop tools for integrated chemical-biological data acquisition, filtering and processing, by taking into account relevant information related to interactions between proteins and small molecules, possible metabolic transformations of small molecules, as well as associated information related to genes, networks, small molecules, and, where applicable, mutants and variants of those proteins. There is yet an unmet need to develop an integrated in silico pharmacology/systems biology continuum that embeds drug-target-clinical outcome (DTCO) triplets, a capability that is vital to the future of chemical biology, pharmacology, and systems biology. Through the development of the SCB approach, scientists will be able to start addressing, in an integrated simulation environment, questions that make the best use of our ever-growing chemical and biological data repositories at the system-wide level. This chapter reviews some of the major research concepts and describes key components that constitute the emerging area of computational systems chemical biology.

  2. Albert Behnke: nitrogen narcosis.

    Science.gov (United States)

    Grover, Casey A; Grover, David H

    2014-02-01

    As early as 1826, divers diving to great depths noted that descent often resulted in a phenomenon of intoxication and euphoria. In 1935, Albert Behnke discovered nitrogen as the cause of this clinical syndrome, a condition now known as nitrogen narcosis. Nitrogen narcosis consists of the development of euphoria, a false sense of security, and impaired judgment upon underwater descent using compressed air below 3-4 atmospheres (99 to 132 feet). At greater depths, symptoms can progress to loss of consciousness. The syndrome remains relatively unchanged in modern diving when compressed air is used. Behnke's use of non-nitrogen-containing gas mixtures subsequent to his discovery during the 1939 rescue of the wrecked submarine USS Squalus pioneered the use of non-nitrogen-containing gas mixtures, which are used by modern divers when working at great depth to avoid the effects of nitrogen narcosis.

  3. Identity transformation

    DEFF Research Database (Denmark)

    Neergaard, Helle; Robinson, Sarah; Jones, Sally

    This paper develops the concept of ‘pedagogical nudging’ and examines four interventions in an entrepreneurship classroom and the potential it has for student identity transformation. Pedagogical nudging is positioned as a tool, which in the hands of a reflective, professional, with an understand......This paper develops the concept of ‘pedagogical nudging’ and examines four interventions in an entrepreneurship classroom and the potential it has for student identity transformation. Pedagogical nudging is positioned as a tool, which in the hands of a reflective, professional......, as well as the resources they have when they come to the classroom. It also incorporates perspectives from (ii) transformational learning and explores the concept of (iii) nudging from a pedagogical viewpoint, proposing it as an important tool in entrepreneurship education. The study incorporates......) assists students in straddling the divide between identities, the emotions and tensions this elicits, and (iv) transform student understanding. We extend nudging theory into a new territory. Pedagogical nudging techniques may be able to unlock doors and bring our students beyond the unacknowledged...

  4. Transformational change

    NARCIS (Netherlands)

    Termeer, Katrien; Dewulf, Art; Biesbroek, Robbert

    2016-01-01

    Although transformational change is a rather new topic in climate change adaptation literature, it has been studied in organisational theory for over 30 years. This paper argues that governance scholars can learn much from organisation theory, more specifically regarding the conceptualisation of

  5. Sustainable transformation

    DEFF Research Database (Denmark)

    Andersen, Nicolai Bo

    , that it can be adapted to changing functional needs, and that it has an architectural and cultural value. A specific proposal for a transformation that enhances the architectural qualities and building heritage values of an existing building forms the empirical material, which is discussed using different...

  6. ADE Transform

    CERN Document Server

    Donagi, Ron

    2015-01-01

    There is a beautiful correspondence between configurations of lines on a rational surface and tautological bundles over that surface. We extend this correspondence to families, by means of a generalized Fourier-Mukai transform that relates spectral data to bundles over a rational surface fibration.

  7. Population biological characteristics and yield of early rice of throwing transplanting under seedling-increase and nitrogen-reduction measures%增苗节氮对早稻抛秧群体生物学特性及产量的影响

    Institute of Scientific and Technical Information of China (English)

    李超; 陈恺林; 刘洋; 杨光立; 汤文光; 胡杨; 张玉烛

    2014-01-01

    The biological characteristics of population of rice ‘Xiangzhaoxian 45’ of throwing transplanting under three nitrogen levels [N1: 105 kg(N)·hm-2 (low nitrogen dose); N2: 135 kg(N)·hm-2 (low nitrogen dose); N3: 165 kg(N)·hm-2 (regular nitrogen dose)] combined with 3 seedling densities [M1: 0.27 million hills per hectare (regular seedling rate); M2:0.315 million hills per hectare (high seedling rate);M3:0.36 million hills per hectare (high seedling rate)] in a split-plot trial field were compared. The results showed that treatment of high seedling rate with low nitrogen rate (N2M3) were the best combination for high yield. Plant height and growth period increased with increasing nitrogen dose, but not significantly changed with increasing seedling density. The growth period under N3 was 7.0 days and 3.4 days longer than that under N2 and N1, respectively. Tiller number increased with increasing nitrogen rate and dropped with increasing seedling density. Regression analysis showed quadratic polynomial relationship among nitrogen application rate (X1), seedling density (X2) and yield (Y). The ma-ximum yield occurred at Y=8.60 t·hm-2, corresponding with X1=127.5 kg(N)·hm-2 of nitrogen rate and X2=0.48 million hills per hectare of rice seedling density, it’s yield was similar to N2M3, and it was 22.7%reduction in nitrogen rate in comparison with regular nitrogen (N3). Thus the best nitrogen application rate for early rice was 127.5-135 kg(N)·hm-2 and the best seed-ling density was 3.60 × 105-4.80 × 105 hills·hm-2. The study showed that increasing seedling rate and decreasing nitrogen rate could lay the basis of early rice cultivation for maximum yield in the study area. In summary, the time contradiction between double season rice of throwing transplanting could be solved by increasing seedlings rate and decreasing nitrogen rate in early rice fields. This benefited low environmental pollution and alleviated eutrophication of water agro-ecosystems.%本研

  8. A/A/O工艺脱氮除磷运行效果分析%Analysis on running effect for biological nitrogen and phosphorus removal of A/A/O technology

    Institute of Scientific and Technical Information of China (English)

    李曈; 郝瑞霞; 刘峰; 刘京

    2011-01-01

    为提高城市污水处理厂科学运行管理水平和出水质量,通过对某污水处理厂污水处理工艺的沿程采样分析,对比分析了A/A/O工艺脱氮除磷效果与工艺运行控制参数之间的相关关系。结果表明,A/A/O工艺对总氮去除率为83.2%,出水中氮的形态主要为硝酸盐氮;出水中总磷浓度基本达到一级A标准,总磷去除率在86.3%以上;缺氧段具有明显的反硝化聚磷作用;脱氮除磷效果与污泥负荷有反向变化关系,泥龄对磷的去除效果影响明显,当污泥负荷控制在0.15kg BOD5/(kg MLVSS.d)左右,泥龄控制在10~12 d时,可以同时%In order to improve the scientific management level and effluent quality of a municipal wastewater treatment plant(WWTP),the relationship between nitrogen and phosphorus removal effect and operating parameters of the A/A/O technology was studied by sampling and analyzing along the process in WWTP of Beijing.The results showed that the total nitrogen removal rate was 83.2%,and the main form of nitrogen was nitrate nitrogen in effluent.The TP concentration in effluent could reach the 1 grade A level of national discharging standard in China basically,and the TP removal rate was over 86.3%.The denitrifying phosphorus removal played a remarkable role in the anoxic phase of A/A/O process.The relationship between nitrogen and phosphorus removal effect and sludge loading expressed inverse variation.Sludge retain time(SRT) had an obvious impact on phosphorus removal.When the sludge loading was about 0.15 kg BOD5/(kg MLVSS·d)and the SRT was about 10~12 d in A/A/O process,nitrogen and phosphorus removal rates were up to 81% and 88%,respectively.There was an inverse variation relationship between the phosphorus accumulation and the sludge emission capacities in the wastewater treatment system.When the sludge emission capacities maintained about 2~2.5 percent of influent,phosphorus removal can be controlled in the stable and

  9. Advancing Crop Transformation in the Era of Genome Editing

    Science.gov (United States)

    Plant transformation has enabled fundamental insights into plant biology and revolutionized commercial agriculture. Unfortunately, for most crops, transformation and regeneration remain arduous even after more than thirty years of technological advances. Genome editing provides new opportunities to...

  10. Rapid start-up of anaerobic ammonium oxidation (anammox) process for nitrogen removal from wastewater

    OpenAIRE

    Ali, Muhammad

    2015-01-01

    The dissertation is associated with the field of biological wastewater treatment and more precisely focus on nitrogen removal from wastewater. The nutrients removal (mainly N and P) from wastewater is necessary in order to avoid the eutrophication of the surface waters. Nitrogen compounds (NH4+, NO2- and NO3-) removal is commonly performed by means of biological processes due to the lower cost as compared to chemical treatment. The conventional nitrogen removal process consists of two steps, ...

  11. Experimental,numerical and sensitive analysis of nitrogen dynamics in soils irrigated with treated sewage

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    An ammonia volatilization submodel and a crop-growth submodel have been set up and incorporated to the 2D nitrogen transport and transformation simulation model Nitrogen-2D. The coupled model Nitrogen-2D considers all the important nitrogen transformation processes such as mineralization, immobilization, denitrification, nitrification, volatilization, root uptake and soil adsorption in the soil. The model was used to simulate the nitrogen dynamics for the experiment in four lysimeters under sewage irrigation. Simulation results show that the model can describe the water content and ammonium nitrogen content distribution well but simulate the change of the nitrate nitrogen poorly. Sensitivity analysis shows that the simulation results are influenced by the soil water characteristic parameters severely, especially by the parameter of n. The model is much less sensitive to N dynamic parameters.

  12. SO2对中亚热带两种森林土壤氮净转化速率的短期影响%Short-term Effect of SO2 Fumigation on Soil Net Nitrogen Transformation Rates for Castanopsis carlesii and Cunninghamia lanceolata Forests of Northern Fujian, Mid-subtropics of China

    Institute of Scientific and Technical Information of China (English)

    朱祥妹; 李任超; 陆建芳; 马红亮; 高人

    2013-01-01

    [Objective] The impact of simulated SO2 deposition on soil nitrogen transformation rates was investigated for the two forests of Castanopsis carksii(CAC) and Cunninghamia lanceolata (CUL) in Northern Fujian, the Mid-subtropical area of China. [ Method] Soil was fumigated with three levels of SO2(0(CK) , 40 (LS)、80 (HS) mg S/kg dry soil) and incubated for 72 hours in Laboratory under the conditions of 30℃ of room temperature and 60% WHC of soil water content and the concerned nitrogen transformation indicators were measured. [ Result] The results showed that for the two forested soils after 10 h SO2 fumigation, HS treatment significantly reduced the soil pH value (P < 0. 05) , and continued for at least 24 h, but the reduction of pH value for the LS treatment was not significant, indicating that the forested soils had some of the buffer capacity to SO2 acidification. The sulfur treatment significantly (P < 0.05) increased organic nitrogen mineralization in early 24 h incubation, but thereafter did not show the effect; sulfur treatment also had positive trend of soil nitrogen mineralization for CUL, but only significant for HS in the early 24 h (P < 0.05). Sulfur treatment influence on the two forested soils nitrification rates showed different dynamic characteristics. For CAS, LS significantly improved nitrification (P < 0.05) in early 24 h, but HS had no pronounced effect in the whole incubation; in contrast, for CUL forest, the influence only appeared in the late period of 48 - 72 h. The two forest soil presented in the early 24 h significant negative correlation between pH value and net mineralization rate, and reduced pH value had inhibition tendency to soil nitrification in the early 48 h for CAC soil with lower pH value(4. 50) , but for CUL soil with relatively higher pH (5. 58) had positive trend to soil net nitrification. [ Conclusion] The influencing mechanism of SO2 deposition to soil nitrogen transformation may be different from that of other common

  13. Elevated CO2 and Soil Nitrogen Cycling

    Science.gov (United States)

    Hofmockel, K.; Schlesinger, W.

    2002-12-01

    Although forests can be large terrestrial carbon sinks, soil fertility can limit carbon sequestration in response to increased atmospheric CO2. During five years of CO2 fertilization (ambient + 200ppm) at the Duke Free-Air CO2 Enrichment (FACE) site, net primary production increased significantly by an average of 25% in treatment plots. Total nitrogen in the foliar canopy increased by 16%, requiring an additional 1.3 g N m-2yr-1 to be taken up from soils under elevated CO2. Mechanisms supporting increased nitrogen acquisition have not been identified. Here we report on biological N-fixation rates, using the acetylene reduction assay, in litter and mineral soil during three years of the CO2 enrichment experiment. Lack of a significant CO2 treatment effect on acetylene reduction indicates that carbon is not directly limiting biological N fixation. Nutrient addition experiments using a complete block design with glucose, Fe, Mo and P indicate biological N fixation is co-limited by molybdenum and carbon. These results suggest even if elevated atmospheric CO2 enhances below-ground carbon availability via root exudation, biological nitrogen fixation may not be stimulated due to micronutrient limitations. Assessment of future carbon sequestration by forest stands must consider limitations imposed by site fertility, including micronutrients.

  14. Discrete transforms

    CERN Document Server

    Firth, Jean M

    1992-01-01

    The analysis of signals and systems using transform methods is a very important aspect of the examination of processes and problems in an increasingly wide range of applications. Whereas the initial impetus in the development of methods appropriate for handling discrete sets of data occurred mainly in an electrical engineering context (for example in the design of digital filters), the same techniques are in use in such disciplines as cardiology, optics, speech analysis and management, as well as in other branches of science and engineering. This text is aimed at a readership whose mathematical background includes some acquaintance with complex numbers, linear differen­ tial equations, matrix algebra, and series. Specifically, a familiarity with Fourier series (in trigonometric and exponential forms) is assumed, and an exposure to the concept of a continuous integral transform is desirable. Such a background can be expected, for example, on completion of the first year of a science or engineering degree cour...

  15. Identification of microorganisms involved in nitrogen removal from wastewater treatment systems by means of molecular biology techniques; Identificacion de microorganismos implicados en la eliminacion de nitrogeno en sistemas de tratamiento de aguas residuales mediante tecnicas de biologia molecular

    Energy Technology Data Exchange (ETDEWEB)

    Figueroa, M.; Alonso-Gutierrez, J.; Campos, J. L.; Mendez, R.; Mosquera-Corral, A.

    2010-07-01

    The identification of the main bacteria populations present in the granular biomass from a biological reactor treating wastewater has been performed by applying two different molecular biology techniques. By means of the DGGE technique five different genera of heterotrophic bacteria (Thiothrix, Thauera, Cloroflexi, Comamanas y Zoogloea) and one of ammonia oxidizing bacteria (Nitrosomanas) were identified. The FISH technique, based on microscopy, allowed the in situ visualization and quantification of those microorganisms. Special attention was paid to filamentous bacteria distribution (Thiothrix and Cloroflexi) which could exert a structural function in aerobic granular sludge. (Author) 26 refs.

  16. XML Transformations

    Directory of Open Access Journals (Sweden)

    Felician ALECU

    2012-04-01

    Full Text Available XSLT style sheets are designed to transform the XML documents into something else. The two most popular parsers of the moment are the Document Object Model (DOM and the Simple API for XML (SAX. DOM is an official recommendation of the W3C (available at http://www.w3.org/TR/REC-DOM-Level-1, while SAX is a de facto standard. A good parser should be fast, space efficient, rich in functionality and easy to use.

  17. Transformative Agency

    DEFF Research Database (Denmark)

    Majgaard, Klaus

    The purpose of this paper is to enhance the conceptual understanding of the mediatory relationship between paradoxes on an organizational and an individual level. It presents a concept of agency that comprises and mediates between a structural and individual pole. The constitution of this agency ...... is achieved through narrative activity that oscillates between the poles and transforms paradoxes through the configuration of plots and metaphors. Empirical cases are introduced in order to illustrate the implications of this understanding....

  18. RF transformer

    Science.gov (United States)

    Smith, James L.; Helenberg, Harold W.; Kilsdonk, Dennis J.

    1979-01-01

    There is provided an improved RF transformer having a single-turn secondary of cylindrical shape and a coiled encapsulated primary contained within the secondary. The coil is tapered so that the narrowest separation between the primary and the secondary is at one end of the coil. The encapsulated primary is removable from the secondary so that a variety of different capacity primaries can be utilized with one secondary.

  19. Molybdenum limitation of asymbiotic nitrogen fixation in tropical forest soils

    Science.gov (United States)

    Barron, Alexander R.; Wurzburger, Nina; Bellenger, Jean Phillipe; Wright, S. Joseph; Kraepiel, Anne M. L.; Hedin, Lars O.

    2009-01-01

    Nitrogen fixation, the biological conversion of di-nitrogen to plant-available ammonium, is the primary natural input of nitrogen to ecosystems, and influences plant growth and carbon exchange at local to global scales. The role of this process in tropical forests is of particular concern, as these ecosystems harbour abundant nitrogen-fixing organisms and represent one third of terrestrial primary production. Here we show that the micronutrient molybdenum, a cofactor in the nitrogen-fixing enzyme nitrogenase, limits nitrogen fixation by free-living heterotrophic bacteria in soils of lowland Panamanian forests. We measured the fixation response to long-term nutrient manipulations in intact forests, and to short-term manipulations in soil microcosms. Nitrogen fixation increased sharply in treatments of molybdenum alone, in micronutrient treatments that included molybdenum by design and in treatments with commercial phosphorus fertilizer, in which molybdenum was a `hidden' contaminant. Fixation did not respond to additions of phosphorus that were not contaminated by molybdenum. Our findings show that molybdenum alone can limit asymbiotic nitrogen fixation in tropical forests and raise new questions about the role of molybdenum and phosphorus in the tropical nitrogen cycle. We suggest that molybdenum limitation may be common in highly weathered acidic soils, and may constrain the ability of some forests to acquire new nitrogen in response to CO2 fertilization.

  20. Subspaces of FMmlet transform

    Institute of Scientific and Technical Information of China (English)

    邹红星; 戴琼海; 赵克; 陈桂明; 李衍达

    2002-01-01

    The subspaces of FMmlet transform are investigated.It is shown that some of the existing transforms like the Fourier transform,short-time Fourier transform,Gabor transform,wavelet transform,chirplet transform,the mean of signal,and the FM-1let transform,and the butterfly subspace are all special cases of FMmlet transform.Therefore the FMmlet transform is more flexible for delineating both the linear and nonlinear time-varying structures of a signal.

  1. Effect of biochar plus fertilizer on the rhizospheric functional bacteria related to the nitrogen transformation in soybean%生物黑炭与化肥配施对大豆根际氮素转化相关功能菌的影响

    Institute of Scientific and Technical Information of China (English)

    刘志华; 李晓梅; 姜振峰; 张少良; 王嘉翼; 刘航; 王宏燕

    2014-01-01

    Biochar made by maize straw at 450 ℃ insulated from oxygen was set as materials. Five experimental treatments were as follows:Control with no fertilizer and biochar application, fertilizer treatment (N 100 mg·kg-1, P 100 mg·kg-1, K 150 mg·kg-1 with no biochar application), fertilizer with few biochar (N 100 mg·kg-1, P 100 mg·kg-1, K 150 mg·kg-1 with 1%biochar), fertilizer with moderate biochar (N 100 mg·kg-1, P 100 mg·kg-1, K 150 mg·kg-1 with 5%biochar) and fertilizer with mass biochar (N 100 mg·kg-1, P 100 mg·kg-1, K 150 mg·kg-1 with 10%biochar). The present study was proceeded to analyze the amounts of the functional bacteria, pH and available nitrogen related to nitrogen transformation of rhizosphere in soybean. The results showed that pH of rhizosphere increased significantly, and dosage effect was observed in amount of azotobacteria, ammonification bacteria and nitrobacteria when fertilizer plus biochar was applied. Moreover, 5% biochar application was favorable to increase the amount of bacteria related to nitrogen transformation in soybean rhizosphere. The results above can offer the evidence to reveal the microbial mechanism of biochar effect on the nutritive substance in soybean rhizosphere.%研究以玉米秸秆源450℃无氧条件制备的生物黑炭为试验材料,设5个处理,即对照(CK,0%)、化肥处理(F,0%生物黑炭+常规施肥,N 100 mg·kg-1、P 100 mg·kg-1、K 150 mg·kg-1)、低量生物黑炭与化肥配施(1%BF,1%生物黑炭+常规施肥)、中等生物黑炭与化肥配施(5%BF,5%生物黑炭+常规施肥)和高量生物黑炭与化肥配施(10%BF,10%生物黑炭+常规施肥)(质量分数)等,研究生物黑炭与化肥配施对大豆根际氮素转化过程中相关功能菌数量、pH及速效氮含量的影响。结果表明,生物黑炭与化肥配施显著增加大豆根际pH;生物黑炭与化肥配施对根际固氮菌数量、氨化细菌数量和硝化细菌数

  2. Nitrogen use efficiency (NUE)

    NARCIS (Netherlands)

    Oenema, O.

    2015-01-01

    There is a need for communications about resource use efficiency and for measures to increase the use efficiency of nutrients in relation to food production. This holds especially for nitrogen. Nitrogen (N) is essential for life and a main nutrient element. It is needed in relatively large quantitie

  3. High Nitrogen Stainless Steel

    Science.gov (United States)

    2011-07-19

    Kiev, 1993. 7. High Nitrogen Steels, edited by M. Kikuchi and Y. Mishima , Vol. 36, No. 7, Iron and Steel Institute of Japan Inernational, Tokyo...the Corrosion of Iron and Steels,” High Nitrogen Steels, edited by M. Kikuchi and Y. Mishima , Vol. 36, No. 7, Iron and Steel Institute of Japan

  4. Nitrogen trading tool

    Science.gov (United States)

    The nitrogen cycle is impacted by human activities, including those that increase the use of nitrogen in agricultural systems, and this impact can be seen in effects such as increased nitrate (NO3) levels in groundwater or surface water resources, increased concentration of nitrous oxide (N2O) in th...

  5. PLANT TRANSFORMATION: ADVANCES AND PERSPECTIVES

    Directory of Open Access Journals (Sweden)

    Alves Adriana Cristina

    1999-01-01

    Full Text Available Genetic transformation is a powerful tool for plant breeding and genetical, physiological or biochemical research, consequently it is an extremely dynamic field. Transgenic plants are commonly used to complete or substitute mutants in basic research, helping the studies of complex biological situations such as pathogenesis process, genome organization, light reception and signal transduction. In this review, recent approaches for foreign gene introduction (e.g. Agrobiolistics, whole tissue electroporation, in planta Agrobacterium transformation, screening (reporter gene possibilities and performance and transformant selection (ipt selective marker are discussed. Transgene expression and mechanisms underlying (transgene inactivation are presented. Practical applications of genetically modified plants, field tests and commercial transgenic crops worldwide and in Brazil are listed, as well as the main traits and species modified. Potential uses of transgenic plants for animal compound production, biological remediation and synthetic polymer assembly are also shown.

  6. Nitrogen in Chinese coals

    Science.gov (United States)

    Wu, D.; Lei, J.; Zheng, B.; Tang, X.; Wang, M.; Hu, Jiawen; Li, S.; Wang, B.; Finkelman, R.B.

    2011-01-01

    Three hundred and six coal samples were taken from main coal mines of twenty-six provinces, autonomous regions, and municipalities in China, according to the resource distribution and coal-forming periods as well as the coal ranks and coal yields. Nitrogen was determined by using the Kjeldahl method at U. S. Geological Survey (USGS), which exhibit a normal frequency distribution. The nitrogen contents of over 90% Chinese coal vary from 0.52% to 1.41% and the average nitrogen content is recommended to be 0.98%. Nitrogen in coal exists primarily in organic form. There is a slight positive relationship between nitrogen content and coal ranking. ?? 2011 Science Press, Institute of Geochemistry, CAS and Springer Berlin Heidelberg.

  7. Relations of FMmlet Transform to Some Integral Transforms

    Institute of Scientific and Technical Information of China (English)

    ZOUHongxing; DAIQionghai; WANGDianjun; LIYanda

    2004-01-01

    In this paper, we explore the relationships between FMmlet transform and some of the existing integral transforms, namely, the chirplet transform, dispersion transform, wavelet transform, chirp-Fourier transform, Short-time fourier transform (STFT), Gabor transform, Fourier transform, cosine transform, sine transform,Hartley transform, Laplace transform, z-transform, Mellintransform, Hilbert transform, autocorrelation function,cross-correlation function, energy, and the mean value.It is shown that all of these transforms are subspaces of FMmlet transform with specific parameters.

  8. The social costs of nitrogen

    Science.gov (United States)

    Keeler, Bonnie L.; Gourevitch, Jesse D.; Polasky, Stephen; Isbell, Forest; Tessum, Chris W.; Hill, Jason D.; Marshall, Julian D.

    2016-01-01

    Despite growing recognition of the negative externalities associated with reactive nitrogen (N), the damage costs of N to air, water, and climate remain largely unquantified. We propose a comprehensive approach for estimating the social cost of nitrogen (SCN), defined as the present value of the monetary damages caused by an incremental increase in N. This framework advances N accounting by considering how each form of N causes damages at specific locations as it cascades through the environment. We apply the approach to an empirical example that estimates the SCN for N applied as fertilizer. We track impacts of N through its transformation into atmospheric and aquatic pools and estimate the distribution of associated costs to affected populations. Our results confirm that there is no uniform SCN. Instead, changes in N management will result in different N-related costs depending on where N moves and the location, vulnerability, and preferences of populations affected by N. For example, we found that the SCN per kilogram of N fertilizer applied in Minnesota ranges over several orders of magnitude, from less than $0.001/kg N to greater than $10/kg N, illustrating the importance of considering the site, the form of N, and end points of interest rather than assuming a uniform cost for damages. Our approach for estimating the SCN demonstrates the potential of integrated biophysical and economic models to illuminate the costs and benefits of N and inform more strategic and efficient N management. PMID:27713926