WorldWideScience

Sample records for biological extinction

  1. Clumpy cold dark matter and biological extinctions

    CERN Document Server

    Collar, J I

    1995-01-01

    Cosmological models with cosmic string and texture seeded universes predict a present abundance of very dense clumps of Cold Dark Matter particles. Their crossing through the solar system would induce a non-negligible amount of radiation damage to all living tissue; the severity of such an episode is assessed. The estimated frequency of these crossings agrees with the apparent periodicity of the paleontological record of biological extinctions. (Phys. Lett. B, in press)

  2. Mass Extinction in a Simple Mathematical Biological Model

    CERN Document Server

    Tokita, K; Tokita, Kei; Yasutomi, Ayumu

    1997-01-01

    Introducing the effect of extinction into the so-called replicator equations in mathematical biology, we construct a general model of ecosystems. The present model shows mass extinction by its own extinction dynamics when the system initially has a large number of species ( diversity). The extinction dynamics shows several significant features such as a power law in basin size distribution, induction time, etc. The present theory can be a mathematical foundation of the species-area effect in the paleontologic theory for mass extinction.

  3. Mass Extinctions vs. Uniformitarianism in Biological Evolution

    OpenAIRE

    Bak, Per; Paczuski, Maya

    1996-01-01

    It is usually believed that Darwin's theory leads to a smooth gradual evolution, so that mass extinctions must be caused by external shocks. However, it has recently been argued that mass extinctions arise from the intrinsic dynamics of Darwinian evolution. Species become extinct when swept by intermittent avalanches propagating through the global ecology. These ideas are made concrete through studies of simple mathematical models of coevolving species. The models exhibit self-organized criti...

  4. Mass extinctions vs. uniformitarianism in biological evolution

    Energy Technology Data Exchange (ETDEWEB)

    Bak, P.; Paczuski, M.

    1995-12-31

    It is usually believed that Darwin`s theory leads to a smooth gradual evolution, so that mass extinctions must be caused by external shocks. However, it has recently been argued that mass extinctions arise from the intrinsic dynamics of Darwinian evolution. Species become extinct when swept by intermittent avalanches propagating through the global ecology. These ideas are made concrete through studies of simple mathematical models of co-evolving species. The models exhibit self-organized criticality and describe some general features of the extinction pattern in the fossil record.

  5. Direct and indirect effects of biological factors on extinction risk in fossil bivalves

    OpenAIRE

    Harnik, Paul G.

    2011-01-01

    Biological factors, such as abundance and body size, may contribute directly to extinction risk and indirectly through their influence on other biological characteristics, such as geographic range size. Paleontological data can be used to explicitly test many of these hypothesized relationships, and general patterns revealed through analysis of the fossil record can help refine predictive models of extinction risk developed for extant species. Here, I use structural equation modeling to tease...

  6. Extinction phenomena: A biologic perspective on how and why psychoanalysis works

    Directory of Open Access Journals (Sweden)

    Linda A.W. Brakel

    2011-09-01

    Full Text Available This article presents the view that much of the success of classical psychoanalysis is centrally predicated on its biological potency; focusing not on neuropsychology, but on the biology of conditioning. The argument suggests that features of classic psychoanalytic technique--the couch, meetings several times per week with both parties present, and free association--uniquely facilitate intense transferences of various sorts, and that these in turn constitute the multiple and diverse extinction trials necessary to best approximate extinction.

  7. Simulation and Experiment of Extinction or Adaptation of Biological Species after Temperature Changes

    Science.gov (United States)

    Stauffer, D.; Arndt, H.

    Can unicellular organisms survive a drastic temperature change, and adapt to it after many generations? In simulations of the Penna model of biological aging, both extinction and adaptation were found for asexual and sexual reproduction as well as for parasex. These model investigations are the basis for the design of evolution experiments with heterotrophic flagellates.

  8. High-extinction VIPA-based Brillouin spectroscopy of turbid biological media

    CERN Document Server

    Fiore, Antonio; Shao, Peng; Yun, Seok Hyun; Scarcelli, Giuliano

    2016-01-01

    Brillouin microscopy has recently emerged as powerful technique to characterize the mechanical properties of biological tissue, cell and biomaterials. However, the potential of Brillouin microscopy is currently limited to transparent samples, because Brillouin spectrometers do not have sufficient spectral extinction to reject the predominant non-Brillouin scattered light of turbid media. To overcome this issue, we developed a spectrometer composed of a two VIPA stages and a multi-pass Fabry-Perot interferometer. The Fabry-Perot etalon acts as an ultra-narrow band-pass filter for Brillouin light with high spectral extinction and low loss. We report background-free Brillouin spectra from Intralipid solutions and up to 100 microns deep within chicken muscle tissue.

  9. Relationships between ocean anoxia, the biological pump, and marine animal life during the Permian-Triassic mass extinction (Invited)

    Science.gov (United States)

    Meyer, K. M.; Schaal, E. K.; Payne, J.

    2013-12-01

    Ocean anoxia/euxinia and carbon cycle instability have long been linked to the end-Permian mass extinction and the Early Triassic interval of delayed or interrupted biotic recovery. Many hypotheses to explain this extinction event invoke the release of greenhouse gases during the emplacement of the Siberian Traps, which likely triggered abrupt changes in marine biogeochemical cycling, atmospheric chemistry, and biodiversity. However, the precise ways in which volcanism and these perturbations are linked and how they governed the tempo and mode of biotic recovery remain poorly understood. Here we highlight new C, Ca, and Sr isotopic data that serve to link volcanic CO2 inputs to changes in marine biogeochemistry and environmental change. We then examine the relationship between ocean biogeochemistry, the biological pump, and marine animal ecosystems during the end-Permian mass extinction and Early Triassic recovery. Finally, we use numerical simulations to probe whether these relationships also explain broad Phanerozoic trends in ocean nutrient status, anoxia, and productivity of marine ecosystems.

  10. In Situ Measurement of the Infrared Spectral Extinction for Various Chemical, Biological, and Background Aerosols

    Science.gov (United States)

    2003-09-01

    11 Figure 10. Measured extinction for agglomerated Cab-O-sil aerogel at various...Transmitted light was coupled to the interferometer with a gold -surfaced f/4 off-axis parabola. Because spectra derived from aerosols are devoid of any... aerogel ” is extremely amorphous (94% of its volume is air) and is sometimes used as a fluidizer to improve aerosol dissemination efficiencies. As a

  11. Ecological response to collapse of the biological pump following the mass extinction at the Cretaceous-Paleogene boundary

    Science.gov (United States)

    Vellekoop, Johan; Woelders, Lineke; Açikalin, Sanem; Smit, Jan; van de Schootbrugge, Bas; Yilmaz, Ismail Ö.; Brinkhuis, Henk; Speijer, Robert P.

    2017-02-01

    It is commonly accepted that the mass extinction associated with the Cretaceous-Paleogene (K-Pg) boundary (˜ 66 Ma) is related to the environmental effects of a large extraterrestrial impact. The biological and oceanographic consequences of the mass extinction are, however, still poorly understood. According to the Living Ocean model, the biological crisis at the K-Pg boundary resulted in a long-term reduction of export productivity in the early Paleocene. Here, we combine organic-walled dinoflagellate cyst (dinocyst) and benthic foraminiferal analyses to provide new insights into changes in the coupling of pelagic and benthic ecosystems. To this end, we perform dinocyst and benthic foraminiferal analyses on the recently discovered Tethyan K-Pg boundary section at Okçular, Turkey, and compare the results with other K-Pg boundary sites in the Tethys. The post-impact dominance of epibenthic morphotypes and an increase of inferred heterotrophic dinocysts in the early Paleocene at Okçular are consistent with published records from other western Tethyan sites. Together, these records indicate that during the early Paleocene more nutrients remained available for the Tethyan planktonic community, whereas benthic communities were deprived of food. Hence, in the post-impact phase the reduction of export productivity likely resulted in enhanced recycling of nutrients in the upper part of the water column, all along the western Tethyan margins.

  12. Think Like a Cockroach: How I Survived an Extinction Event in Biological Research

    Energy Technology Data Exchange (ETDEWEB)

    Wiley, H. S.

    2008-02-01

    Some young biologists might think that getting NIH funding has never been harder than it is now, but those of us who have been around for a while can remember a period in the early 90’s when NIH funding seemed to all but disappear. I’m talking 7% paylines at some institutions. I went through a period where I submitted 12 unsuccessful proposals in a row. Somehow I survived along with many of my colleagues, so excuse me if I don’t quite feel yet that the apocalypse is upon us. At the time, however, many of us felt exactly that way. We called the dramatic drop in funding “the asteroid strike”, in honor of the recently discovered impact site of the asteroid thought to be responsible for the extinction of the dinosaurs at the end of the Cretaceous period.

  13. Biologically based neural circuit modelling for the study of fear learning and extinction

    Science.gov (United States)

    Nair, Satish S.; Paré, Denis; Vicentic, Aleksandra

    2016-11-01

    The neuronal systems that promote protective defensive behaviours have been studied extensively using Pavlovian conditioning. In this paradigm, an initially neutral-conditioned stimulus is paired with an aversive unconditioned stimulus leading the subjects to display behavioural signs of fear. Decades of research into the neural bases of this simple behavioural paradigm uncovered that the amygdala, a complex structure comprised of several interconnected nuclei, is an essential part of the neural circuits required for the acquisition, consolidation and expression of fear memory. However, emerging evidence from the confluence of electrophysiological, tract tracing, imaging, molecular, optogenetic and chemogenetic methodologies, reveals that fear learning is mediated by multiple connections between several amygdala nuclei and their distributed targets, dynamical changes in plasticity in local circuit elements as well as neuromodulatory mechanisms that promote synaptic plasticity. To uncover these complex relations and analyse multi-modal data sets acquired from these studies, we argue that biologically realistic computational modelling, in conjunction with experiments, offers an opportunity to advance our understanding of the neural circuit mechanisms of fear learning and to address how their dysfunction may lead to maladaptive fear responses in mental disorders.

  14. Rethinking Extinction.

    Science.gov (United States)

    Dunsmoor, Joseph E; Niv, Yael; Daw, Nathaniel; Phelps, Elizabeth A

    2015-10-07

    Extinction serves as the leading theoretical framework and experimental model to describe how learned behaviors diminish through absence of anticipated reinforcement. In the past decade, extinction has moved beyond the realm of associative learning theory and behavioral experimentation in animals and has become a topic of considerable interest in the neuroscience of learning, memory, and emotion. Here, we review research and theories of extinction, both as a learning process and as a behavioral technique, and consider whether traditional understandings warrant a re-examination. We discuss the neurobiology, cognitive factors, and major computational theories, and revisit the predominant view that extinction results in new learning that interferes with expression of the original memory. Additionally, we reconsider the limitations of extinction as a technique to prevent the relapse of maladaptive behavior and discuss novel approaches, informed by contemporary theoretical advances, that augment traditional extinction methods to target and potentially alter maladaptive memories.

  15. Rethinking Extinction

    OpenAIRE

    Dunsmoor, Joseph E.; Niv, Yael; Daw, Nathaniel; Phelps, Elizabeth A.

    2015-01-01

    Extinction serves as the leading theoretical framework and experimental model to describe how learned behaviors diminish through absence of anticipated reinforcement. In the past decade, extinction has moved beyond the realm of associative learning theory and behavioral experimentation in animals and has become a topic of considerable interest in the neuroscience of learning, memory, and emotion. Here, we review research and theories of extinction, both as a learning process and as a behavior...

  16. [Biological crisis at the end of the Cretaceous and the extinction of the dinosaurs. Validity of the cosmic hypothesis].

    Science.gov (United States)

    Magnol, J P

    2001-01-01

    The history of life, which appeared more than 500 million years ago, has been characterized by a constant faunal and floral turnover. On five occasions, the background extinctions has become a mass extinction (ME), i.e. a major biotic crisis collapsing the upward curve of the biodiversity. The mass extinction of the end of the Permian is the most murderous but the end-Cretaceous one, which experiences dinosaur's death, is the most well-known. In fact, these land-dwelling reptiles with upright limbs, as well as the pterosaurs, the mosasaurs and numerous invertebrates die as far as the last. There exists a lot of hypotheses tending to explain their death but they are often extravagant and/or impossible to be verified. The last one, referring to a collapse between the earth and a heavenly large bolide has given rise, since more than 20 years, to heated debates between catastrophists and gradualists, even if the reality of the impact seems no more doubtful (discovery of Chicxulub impact crater, iridium anomaly, tektite glass, shocked quartz, spinels with high nickel concentrations). It is now the extent of the deleterious effects (regional or worldwide repercussion) which is debating. By referring to the obtained data in oceanic environment and, if necessary, in terrestrial environment where fossil record is too often incomplete, it can be noticed an important fact corresponding to a selective character of extinctions, the event of the C/T boundary killing off some taxa while others are preserved. This remark does not really correspond to the hypothesis of a sudden planetary catastrophe of large magnitude. Consequently, it seems to be reasonable to make arise intrinsic factors associated to the dynamics of the globe (volcanic eruptions, marine regression, fall of temperature) over a long period. The collapse with the Chicxulub asteroid should then come up, especially in Western North-America, as a "coup de grâce" in a weakened ecosystem.

  17. Exploring co-extinction correlates

    DEFF Research Database (Denmark)

    Carpaneto, Giuseppe Maria; Mazziotta, Adriano; Pittino, Riccardo

    2011-01-01

    Co-extinction is a recurring topic in conservation biology. Quantification of co-extinction has been generally restricted to parasite-host, predator-prey and herbivore-host plant interactions. The loss of detritivorous insects upon the depletion of herbivore mammals has been poorly explored. Here...

  18. Extinction Events Can Accelerate Evolution

    DEFF Research Database (Denmark)

    Lehman, Joel; Miikkulainen, Risto

    2015-01-01

    computational support for this hypothesis, this paper shows how increased evolvability will result from simulated extinction events in two computational models of evolved behavior. The conclusion is that although they are destructive in the short term, extinction events may make evolution more prolific......Extinction events impact the trajectory of biological evolution significantly. They are often viewed as upheavals to the evolutionary process. In contrast, this paper supports the hypothesis that although they are unpredictably destructive, extinction events may in the long term accelerate...... evolution by increasing evolvability. In particular, if extinction events extinguish indiscriminately many ways of life, indirectly they may select for the ability to expand rapidly through vacated niches. Lineages with such an ability are more likely to persist through multiple extinctions. Lending...

  19. Extinction events can accelerate evolution.

    Directory of Open Access Journals (Sweden)

    Joel Lehman

    Full Text Available Extinction events impact the trajectory of biological evolution significantly. They are often viewed as upheavals to the evolutionary process. In contrast, this paper supports the hypothesis that although they are unpredictably destructive, extinction events may in the long term accelerate evolution by increasing evolvability. In particular, if extinction events extinguish indiscriminately many ways of life, indirectly they may select for the ability to expand rapidly through vacated niches. Lineages with such an ability are more likely to persist through multiple extinctions. Lending computational support for this hypothesis, this paper shows how increased evolvability will result from simulated extinction events in two computational models of evolved behavior. The conclusion is that although they are destructive in the short term, extinction events may make evolution more prolific in the long term.

  20. Extinction Events Can Accelerate Evolution

    Science.gov (United States)

    Lehman, Joel; Miikkulainen, Risto

    2015-01-01

    Extinction events impact the trajectory of biological evolution significantly. They are often viewed as upheavals to the evolutionary process. In contrast, this paper supports the hypothesis that although they are unpredictably destructive, extinction events may in the long term accelerate evolution by increasing evolvability. In particular, if extinction events extinguish indiscriminately many ways of life, indirectly they may select for the ability to expand rapidly through vacated niches. Lineages with such an ability are more likely to persist through multiple extinctions. Lending computational support for this hypothesis, this paper shows how increased evolvability will result from simulated extinction events in two computational models of evolved behavior. The conclusion is that although they are destructive in the short term, extinction events may make evolution more prolific in the long term. PMID:26266804

  1. United theory of biological evolution:Disaster-forced evolution through Supernova, radioactive ash fall-outs, genome instability, and mass extinctions

    Institute of Scientific and Technical Information of China (English)

    Toshikazu Ebisuzaki; Shigenori Maruyama

    2015-01-01

    We present the disaster-forced biological evolution model as a general framework that includes Darwinian “phylogenic gradualism”, Eldredge-Gould’s “punctuated equilibrium”, mass extinctions, and allopatric, parapatric, and sympatric speciation. It describes how reproductive isolation of organisms is established through global disasters due to supernova encounters and local disasters due to radioactive volcanic ash fall-outs by continental alkaline volcanism. Our new evolution model uniquely highlights three major factors of disaster-forced speciation: enhanced mutation rate by higher natural radiation level, smaller population size, and shrunken habitat size (i.e., isolation among the individual pop-ulations). We developed a mathematical model describing speciation of a half-isolated group from a parental group, taking into account the population size (Ne), immigration rate (m), and mutation rate (m). The model gives a quantitative estimate of the speciation, which is consistent with the observations of speciation speed. For example, the speciation takes at least 105 generations, if mutation rate is less than 10?3 per generation per individual. This result is consistent with the previous studies, in which m is assumed to be 10?3e10?5. On the other hand, the speciation is much faster (less than 105 generations) for the case that m is as large as 0.1 in parapatric conditions (mextinction events, such as observed during the Cambrian explosion of biodiversity. A similar rapid speciation (though in a much smaller

  2. United theory of biological evolution: Disaster-forced evolution through Supernova, radioactive ash fall-outs, genome instability, and mass extinctions

    Directory of Open Access Journals (Sweden)

    Toshikazu Ebisuzaki

    2015-01-01

    Full Text Available We present the disaster-forced biological evolution model as a general framework that includes Darwinian “phylogenic gradualism”, Eldredge-Gould's “punctuated equilibrium”, mass extinctions, and allopatric, parapatric, and sympatric speciation. It describes how reproductive isolation of organisms is established through global disasters due to supernova encounters and local disasters due to radioactive volcanic ash fall-outs by continental alkaline volcanism. Our new evolution model uniquely highlights three major factors of disaster-forced speciation: enhanced mutation rate by higher natural radiation level, smaller population size, and shrunken habitat size (i.e., isolation among the individual populations. We developed a mathematical model describing speciation of a half-isolated group from a parental group, taking into account the population size (Ne, immigration rate (m, and mutation rate (μ. The model gives a quantitative estimate of the speciation, which is consistent with the observations of speciation speed. For example, the speciation takes at least 105 generations, if mutation rate is less than 10−3 per generation per individual. This result is consistent with the previous studies, in which μ is assumed to be 10−3–10−5. On the other hand, the speciation is much faster (less than 105 generations for the case that μ is as large as 0.1 in parapatric conditions (m < μ. Even a sympatric (m ~ 1 speciation can occur within 103 generations, if mutation rate is very high (μ ~ 1 mutation per individual per generation, and if Ne < 20–30. Such a high mutation rate is possible during global disasters due to supernova encounters and local disasters due to radioactive ash fall-outs. They raise natural radiation level by a factor of 100–1000. Such rapid speciation events can also contribute to macro-evolution during mass extinction events, such as observed during the Cambrian explosion of biodiversity. A

  3. Reconstructing past species assemblages reveals the changing patterns and drivers of extinction through time

    OpenAIRE

    Bromham, Lindell; Lanfear, Robert; Cassey, Phillip; Gibb, Gillian; Cardillo, Marcel

    2012-01-01

    Predicting future species extinctions from patterns of past extinctions or current threat status relies on the assumption that the taxonomic and biological selectivity of extinction is consistent through time. If the driving forces of extinction change through time, this assumption may be unrealistic. Testing the consistency of extinction patterns between the past and the present has been difficult, because the phylogenetically explicit methods used to model present-day extinction risk typica...

  4. Infectious Disease, Endangerment, and Extinction

    Directory of Open Access Journals (Sweden)

    Ross D. E. MacPhee

    2013-01-01

    Full Text Available Infectious disease, especially virulent infectious disease, is commonly regarded as a cause of fluctuation or decline in biological populations. However, it is not generally considered as a primary factor in causing the actual endangerment or extinction of species. We review here the known historical examples in which disease has, or has been assumed to have had, a major deleterious impact on animal species, including extinction, and highlight some recent cases in which disease is the chief suspect in causing the outright endangerment of particular species. We conclude that the role of disease in historical extinctions at the population or species level may have been underestimated. Recent methodological breakthroughs may lead to a better understanding of the past and present roles of infectious disease in influencing population fitness and other parameters.

  5. A Comprehensive Quantitative Assessment of Bird Extinction Risk in Brazil

    OpenAIRE

    Nathália Machado; Rafael Dias Loyola

    2013-01-01

    In an effort to avoid species loss, scientists have focused their efforts on the mechanisms making some species more prone to extinction than others. However, species show different responses to threats given their evolutionary history, behavior, and intrinsic biological features. We used bird biological features and external threats to (1) understand the multiple pathways driving Brazilian bird species to extinction, (2) to investigate if and how extinction risk is geographically structured,...

  6. Gradual extinction reduces Reinstatement

    Directory of Open Access Journals (Sweden)

    Youssef eShiban

    2015-09-01

    Full Text Available The current study investigated whether gradually reducing the frequency of aversive stimuli during extinction can prevent the return of fear. Thirty-one participants of a three-stage procedure (acquisition, extinction and a reinstatement test on day two were randomly assigned to a standard extinction (SE and gradual extinction (GE procedure. The two groups differed only in the extinction procedure. While the SE group ran through a regular extinction process without any negative events, the frequency of the aversive stimuli during the extinction phase was gradually reduced for the GE group. The unconditioned stimulus was an air blast (5 bar, 10 ms. A spider and a scorpion were used as conditioned stimuli. The outcome variables were contingency ratings and physiological measures (skin conductance response and startle response. There were no differences found between the two groups for the acquisition and extinction phases concerning contingency ratings, SCR, or startle response. Gradual extinction compared to standard extinction significantly reduced the return of fear in the reinstatement test for the startle response but not for skin conductance response or contingency ratings. This study was successful in translating the findings in rodent to humans. The results suggest that the gradual extinction process is suitable for increasing the efficacy of fear extinction.

  7. Is extinction forever?

    Science.gov (United States)

    Smith-Patten, Brenda D; Bridge, Eli S; Crawford, Priscilla H C; Hough, Daniel J; Kelly, Jeffrey F; Patten, Michael A

    2015-05-01

    Mistrust of science has seeped into public perception of the most fundamental aspect of conservation-extinction. The term ought to be straightforward, and yet, there is a disconnect between scientific discussion and public views. This is not a mere semantic issue, rather one of communication. Within a population dynamics context, we say that a species went locally extinct, later to document its return. Conveying our findings matters, for when we use local extinction, an essentially nonsensical phrase, rather than extirpation, which is what is meant, then we contribute to, if not create outright, a problem for public understanding of conservation, particularly as local extinction is often shortened to extinction in media sources. The public that receives the message of our research void of context and modifiers comes away with the idea that extinction is not forever or, worse for conservation as a whole, that an extinction crisis has been invented.

  8. Correlated variations and periodicity of global CO{sub 2}, biological mass extinctions and extra-terrestrial bolide impacts over the past 250 million years and possible geodynamical implications

    Energy Technology Data Exchange (ETDEWEB)

    Tiwari, R.k.; Rao, K.N.N. [National Geophysical Research Institute, Hyderabad (India). Theoretical Geophysics Group

    1998-12-31

    Earth`s history has been witness to recurrently alternating phases of catastrophic evolution and dominant tectonic deformations, contractions and extension of rifting and spreading leading to quasi-cyclic changes in sedimentary environment and various earth processes. Recent studies have shown quasi-periodicities of 32{+-}2 Million years (Myr) in various endogenic (geomagnetic reversals, magmatic events, mantle convection, various tectonic activities, climate change and biological extinctions) and exogenic (impact catering) processes indicating a remarkable kinship. A time series analysis is presented of the available CO{sub 2} record over the past 250 Myr decoded from global CaCO{sub 3} accumulation rates in sedimentary environment. The time series analysis reveals an intriguing evidence of a dominant periodicity of 33{+-}2 Myr which matches closely with a `common catastrophic periodicity` of 32 Myr identified in various terrestrial and extra-terrestrial records. The authors argue for a common physical link among the periodic global CO{sub 2} variations, mantle convection, geomagnetic reversals, volcanism, geotectonic cycles and enhanced cometary showers. Periodic variations in CO{sub 2} are suggested as one of the possible terrestrial stimulators for the oscillating `greenhouse effect` and related climatic deterioration that result in quasi-periodic mass extinctions. Identifical catastrophic cycles of endogenic and exogenic origin enhance the credence of their physical linkages and uphold the concept of non-uniformitarianism in earth`s processes. 55 refs., 4 figs., 2 tabs.

  9. Correlated variations and periodicity of global CO[sub 2], biological mass extinctions and extra-terrestrial bolide impacts over the past 250 million years and possible geodynamical implications

    Energy Technology Data Exchange (ETDEWEB)

    Tiwari, R.k.; Rao, K.N.N. (National Geophysical Research Institute, Hyderabad (India). Theoretical Geophysics Group)

    1998-01-01

    Earth's history has been witness to recurrently alternating phases of catastrophic evolution and dominant tectonic deformations, contractions and extension of rifting and spreading leading to quasi-cyclic changes in sedimentary environment and various earth processes. Recent studies have shown quasi-periodicities of 32[+-]2 Million years (Myr) in various endogenic (geomagnetic reversals, magmatic events, mantle convection, various tectonic activities, climate change and biological extinctions) and exogenic (impact catering) processes indicating a remarkable kinship. A time series analysis is presented of the available CO[sub 2] record over the past 250 Myr decoded from global CaCO[sub 3] accumulation rates in sedimentary environment. The time series analysis reveals an intriguing evidence of a dominant periodicity of 33[+-]2 Myr which matches closely with a 'common catastrophic periodicity' of 32 Myr identified in various terrestrial and extra-terrestrial records. The authors argue for a common physical link among the periodic global CO[sub 2] variations, mantle convection, geomagnetic reversals, volcanism, geotectonic cycles and enhanced cometary showers. Periodic variations in CO[sub 2] are suggested as one of the possible terrestrial stimulators for the oscillating 'greenhouse effect' and related climatic deterioration that result in quasi-periodic mass extinctions. Identifical catastrophic cycles of endogenic and exogenic origin enhance the credence of their physical linkages and uphold the concept of non-uniformitarianism in earth's processes. 55 refs., 4 figs., 2 tabs.

  10. Morphological and behavioral convergence in extinct and extant bugs: the systematics and biology of a new unusual fossil lace bug from the eocene.

    Directory of Open Access Journals (Sweden)

    Torsten Wappler

    Full Text Available The bug Gyaclavator kohlsi Wappler, Guilbert, Wedmann et Labandeira, gen. et sp. nov., represents a new extinct genus of lace bugs (Insecta: Heteroptera: Tingidae occurring in latest early Eocene deposits of the Green River Formation, from the southern Piceance Basin of Northwestern Colorado, in North America. Gyaclavator can be placed within the Tingidae with certainty, perhaps it is sistergroup to Cantacaderinae. If it belongs to Cantacaderinae, it is the first fossil record of this group for North America. Gyaclavator has unique, conspicuous antennae bearing a specialized, highly dilated distiflagellomere, likely important for intra- or intersex reproductive competition and attraction. This character parallels similar antennae in leaf-footed bugs (Coreidae, and probably is associated with a behavioral convergence as well.

  11. Modern examples of extinctions

    DEFF Research Database (Denmark)

    Lövei, Gabor L

    2013-01-01

    reasons (certain groups do not fossilize) and methodological problems (methods of excavation and identification). Consequently, we can only crudely estimate the current rate of extinction. Nonetheless, it is evident that humans generated a new mass extinction, affecting all species in all habitats, and......No species lives forever, and extinction is the ultimate fate of all living species. The fossil record indicates that a recent extinction wave affecting terrestrial vertebrates was parallel with the arrival of modern humans to areas formerly uninhabited by them. These modern instances of extinction...... started at around 40,000 years ago. On continents, large mammals (especially those >50 kg body mass) were affected, while on islands, the impacts were mainly felt by birds. The causes of these extinctions are not well known but hunting, habitat alteration and the introduction of non-native species...

  12. Mass extinction: a commentary

    Science.gov (United States)

    Raup, D. M.

    1987-01-01

    Four neocatastrophist claims about mass extinction are currently being debated; they are that: 1, the late Cretaceous mass extinction was caused by large body impact; 2, as many as five other major extinctions were caused by impact; 3, the timing of extinction events since the Permian is uniformly periodic; and 4, the ages of impact craters on Earth are also periodic and in phase with the extinctions. Although strongly interconnected the four claims are independent in the sense that none depends on the others. Evidence for a link between impact and extinction is strong but still needs more confirmation through bed-by-bed and laboratory studies. An important area for future research is the question of whether extinction is a continuous process, with the rate increasing at times of mass extinctions, or whether it is episodic at all scales. If the latter is shown to be generally true, then species are at risk of extinction only rarely during their existence and catastrophism, in the sense of isolated events of extreme stress, is indicated. This is line of reasoning can only be considered an hypothesis for testing. In a larger context, paleontologists may benefit from a research strategy that looks to known Solar System and Galactic phenomena for predictions about environmental effects on earth. The recent success in the recognition of Milankovitch Cycles in the late Pleistocene record is an example of the potential of this research area.

  13. Temporal Dynamics of Recovery from Extinction Shortly after Extinction Acquisition

    Science.gov (United States)

    Archbold, Georgina E.; Dobbek, Nick; Nader, Karim

    2013-01-01

    Evidence suggests that extinction is new learning. Memory acquisition involves both short-term memory (STM) and long-term memory (LTM) components; however, few studies have examined early phases of extinction retention. Retention of auditory fear extinction was examined at various time points. Shortly (1-4 h) after extinction acquisition…

  14. Self-Organized Criticality and Mass Extinction in Evolutionary Algorithms

    DEFF Research Database (Denmark)

    Krink, Thiemo; Thomsen, Rene

    2001-01-01

    niches after mass extinction events. Furthermore, paleontological studies have shown that there is a power law relationship between the frequency of species extinction events and the sue of the extinction impact. Power law relationships of this kind are typical for complex systems, which operate...... at a critical state between chaos and order, known as self-organized criticality (SOC). Based on this background, we used SOC to control the size of spatial extinction zones in a diffusion model. The SOC selection process was easy to implement and implied only negligible computational costs. Our results show...... that the SOC spatial extinction model clearly outperforms simple evolutionary algorithms (EAs) and the difffision model (CGA). Further, our results support the biological hypothesis that mass extinctions might play an important role in evolution. However, the success of simple EAs indicates that evolution...

  15. A comprehensive quantitative assessment of bird extinction risk in Brazil.

    Directory of Open Access Journals (Sweden)

    Nathália Machado

    Full Text Available In an effort to avoid species loss, scientists have focused their efforts on the mechanisms making some species more prone to extinction than others. However, species show different responses to threats given their evolutionary history, behavior, and intrinsic biological features. We used bird biological features and external threats to (1 understand the multiple pathways driving Brazilian bird species to extinction, (2 to investigate if and how extinction risk is geographically structured, and (3 to quantify how much diversity is currently represented inside protected areas. We modeled the extinction risk of 1557 birds using classification trees and evaluated the relative contribution of each biological feature and external threat in predicting extinction risk. We also quantified the proportion of species and their geographic range currently protected by the network of Brazilian protected areas. The optimal classification tree showed different pathways to bird extinction. Habitat conversion was the most important predictor driving extinction risk though other variables, such as geographic range size, type of habitat, hunting or trapping and trophic guild, were also relevant in our models. Species under higher extinction risk were concentrated mainly in the Cerrado Biodiversity Hotspot and were not quite represented inside protected areas, neither in richness nor range. Predictive models could assist conservation actions, and this study could contribute by highlighting the importance of natural history and ecology in these actions.

  16. Life extinctions by neutron star mergers

    CERN Document Server

    Dar, Arnon; Shaviv, N J; Dar, Arnon; Laor, Ari; Shaviv, Nir J.

    1997-01-01

    High energy cosmic ray jets from nearby mergers or accretion induced collapse (AIC) of neutron stars (NS) that hit the atmosphere can produce lethal fluxes of atmospheric muons at ground level, underground and underwater, destroy the ozone layer and radioactivate the environment. They could have caused most of the massive life extinctions on planet Earth in the past 600 My. Biological mutations due to ionizing radiations could have caused the fast appearance of new species after the massive extinctions. An early warning of future extinctions due to NS mergers may be obtained by identifying, mapping and timing all the nearby binary neutron stars systems. A warning of an approaching cosmic ray burst from a nearby NS merger/AIC may be provided by a very intense gamma ray burst which preceeds it.

  17. Ecological model of extinctions

    CERN Document Server

    Abramson, G

    1997-01-01

    We present numerical results based on a simplified ecological system in evolution, showing features of extinction similar to that claimed for the biosystem on Earth. In the model each species consists of a population in interaction with the others, that reproduces and evolves in time. Each species is simultaneously a predator and a prey in a food chain. Mutations that change the interactions are supposed to occur randomly at a low rate. Extinctions of populations result naturally from the predator-prey dynamics. The model is not pinned in a fitness variable, and natural selection arises from the dynamics.

  18. Biologic

    CERN Document Server

    Kauffman, L H

    2002-01-01

    In this paper we explore the boundary between biology and the study of formal systems (logic). In the end, we arrive at a summary formalism, a chapter in "boundary mathematics" where there are not only containers but also extainers ><, entities open to interaction and distinguishing the space that they are not. The boundary algebra of containers and extainers is to biologic what boolean algebra is to classical logic. We show how this formalism encompasses significant parts of the logic of DNA replication, the Dirac formalism for quantum mechanics, formalisms for protein folding and the basic structure of the Temperley Lieb algebra at the foundations of topological invariants of knots and links.

  19. Context, Learning, and Extinction

    Science.gov (United States)

    Gershman, Samuel J.; Blei, David M.; Niv, Yael

    2010-01-01

    A. Redish et al. (2007) proposed a reinforcement learning model of context-dependent learning and extinction in conditioning experiments, using the idea of "state classification" to categorize new observations into states. In the current article, the authors propose an interpretation of this idea in terms of normative statistical inference. They…

  20. Ecology: Dynamics of Indirect Extinction.

    Science.gov (United States)

    Montoya, Jose M

    2015-12-01

    The experimental identification of the mechanism by which extinctions of predators trigger further predator extinctions emphasizes the role of indirect effects between species in disturbed ecosystems. It also has deep consequences for the hidden magnitude of the current biodiversity crisis.

  1. The role of extraterrestrial phenomena in extinction.

    Science.gov (United States)

    Raup, D M

    1988-01-01

    In the several years since the Alvarez report of anomalously high iridium concentrations at the Cretaceous-Tertiary boundary, evidence for the involvement of meteorite impacts in biological extinction has increased dramatically. Much more research will be needed, however, before meteorite impact is established as a general causal factor in extinction. Of ever greater long-term interest is the possibility that other extraterrestrial forces have had important influences on the evolution of life. To recognize the effects of such forces, it will be necessary to coordinate the research of astronomy and paleontology so that testable predictions can be formulated. It is possible that known, systematic changes in the Solar System or Galaxy have had effects on global biology and that these effects have been preserved in the paleontological record.

  2. Reconstructing past species assemblages reveals the changing patterns and drivers of extinction through time.

    Science.gov (United States)

    Bromham, Lindell; Lanfear, Robert; Cassey, Phillip; Gibb, Gillian; Cardillo, Marcel

    2012-10-01

    Predicting future species extinctions from patterns of past extinctions or current threat status relies on the assumption that the taxonomic and biological selectivity of extinction is consistent through time. If the driving forces of extinction change through time, this assumption may be unrealistic. Testing the consistency of extinction patterns between the past and the present has been difficult, because the phylogenetically explicit methods used to model present-day extinction risk typically cannot be applied to the data from the fossil record. However, the detailed historical and fossil records of the New Zealand avifauna provide a unique opportunity to reconstruct a complete, large faunal assemblage for different periods in the past. Using the first complete phylogeny of all known native New Zealand bird species, both extant and extinct, we show how the taxonomic and phylogenetic selectivity of extinction, and biological correlates of extinction, change from the pre-human period through Polynesian and European occupation, to the present. These changes can be explained both by changes in primary threatening processes, and by the operation of extinction filter effects. The variable patterns of extinction through time may confound attempts to identify risk factors that apply across time periods, and to infer future species declines from past extinction patterns and current threat status.

  3. Mass Extinctions Past and Present.

    Science.gov (United States)

    Allmon, Warren Douglas

    1987-01-01

    Discusses some parallels that seem to exist between mass extinction recognizable in the geologic record and the impending extinction of a significant proportion of the earth's species due largely to tropical deforestation. Describes some recent theories of causal factors and periodicities in mass extinction. (Author/TW)

  4. Extinction events and species lifetimes in a simple ecological model

    CERN Document Server

    Drossel, B

    1998-01-01

    A model for large-scale evolution recently introduced by Amaral and Meyer is studied analytically and numerically. Species are located at different trophic levels and become extinct if their prey becomes extinct. It is proved that this model is self-organized critical in the thermodynamic limit, with an exponent 2 characterizing the size distribution of extinction events. The lifetime distribution of species, cutoffs due to finite-size effects, and other quantities are evaluated. The relevance of this model to biological evolution is critically assessed.

  5. Neuronal circuits of fear extinction.

    Science.gov (United States)

    Herry, Cyril; Ferraguti, Francesco; Singewald, Nicolas; Letzkus, Johannes J; Ehrlich, Ingrid; Lüthi, Andreas

    2010-02-01

    Fear extinction is a form of inhibitory learning that allows for the adaptive control of conditioned fear responses. Although fear extinction is an active learning process that eventually leads to the formation of a consolidated extinction memory, it is a fragile behavioural state. Fear responses can recover spontaneously or subsequent to environmental influences, such as context changes or stress. Understanding the neuronal substrates of fear extinction is of tremendous clinical relevance, as extinction is the cornerstone of psychological therapy of several anxiety disorders and because the relapse of maladaptative fear and anxiety is a major clinical problem. Recent research has begun to shed light on the molecular and cellular processes underlying fear extinction. In particular, the acquisition, consolidation and expression of extinction memories are thought to be mediated by highly specific neuronal circuits embedded in a large-scale brain network including the amygdala, prefrontal cortex, hippocampus and brain stem. Moreover, recent findings indicate that the neuronal circuitry of extinction is developmentally regulated. Here, we review emerging concepts of the neuronal circuitry of fear extinction, and highlight novel findings suggesting that the fragile phenomenon of extinction can be converted into a permanent erasure of fear memories. Finally, we discuss how research on genetic animal models of impaired extinction can further our understanding of the molecular and genetic bases of human anxiety disorders.

  6. Progress to extinction: increased specialisation causes the demise of animal clades

    Science.gov (United States)

    Raia, P.; Carotenuto, F.; Mondanaro, A.; Castiglione, S.; Passaro, F.; Saggese, F.; Melchionna, M.; Serio, C.; Alessio, L.; Silvestro, D.; Fortelius, M.

    2016-08-01

    Animal clades tend to follow a predictable path of waxing and waning during their existence, regardless of their total species richness or geographic coverage. Clades begin small and undifferentiated, then expand to a peak in diversity and range, only to shift into a rarely broken decline towards extinction. While this trajectory is now well documented and broadly recognised, the reasons underlying it remain obscure. In particular, it is unknown why clade extinction is universal and occurs with such surprising regularity. Current explanations for paleontological extinctions call on the growing costs of biological interactions, geological accidents, evolutionary traps, and mass extinctions. While these are effective causes of extinction, they mainly apply to species, not clades. Although mass extinctions is the undeniable cause for the demise of a sizeable number of major taxa, we show here that clades escaping them go extinct because of the widespread tendency of evolution to produce increasingly specialised, sympatric, and geographically restricted species over time.

  7. Mass Extinctions' Selectivity on the Diversity of Marine Modes of Life

    Science.gov (United States)

    Park, C.; Saux, J.; Heim, N.; Payne, J.

    2015-12-01

    A mass extinction is defined by a substantial increase in extinction rates, resulting in a loss of biological and ecological diversity. However, a mass extinction's taxonomic severity does not always correlate with its ecological severity (Droser et al. 2009). Using the fossil record, one can reconstruct the relationships between extinct biota and past environments through extrapolating evidence of an organism's feeding, tiering, and motility based on its functional morphology and analogies with its extant relatives. We used Bush, Bambach, and Daly's conceptual model of marine ecospace to study marine modes of life. We looked at the number of different ecological modes over time, and observed that this curve roughly parallels Sepkoski's generic diversity over time in that the number of ecological modes generally increases over time. Then we measured the selectivity of each mass extinction in log-odds using logistic regression. Here we compiled a "heat map" of the selectivity of 5 major mass extinctions based on the life mode of each marine genus in our dataset. Additionally, we looked at the standard deviation of the log-odds of extinction, which shows how uniform the selectivity of the mass extinction is across all life modes (i.e. a small standard deviation points to a more uniform selectivity among life modes). Ecological diversity was impacted by the mass extinctions: the end-Permian (Changhsingian) mass extinction had less variation in log-odds of extinction, whereas the other mass extinctions had a greater range of standard deviation of the log-odds of extinction. Three of the five mass extinctions (Famennian, Rhaetian, and Maastrichtian) were more ecologically selective than the others (Hirnantian and Changhsingian), which indicate that these two had factors that affected most marine life modes equally. In conclusion, not all mass extinctions had the same ecological effect.

  8. Extinction debt on oceanic islands

    DEFF Research Database (Denmark)

    Triantis, Kostas A.; Borges, Paulo A. V.; Ladle, Richard J.

    2010-01-01

    Habitat destruction is the leading cause of species extinctions. However, there is typically a time-lag between the reduction in habitat area and the eventual disappearance of the remnant populations. These "surviving but ultimately doomed" species represent an extinction debt. Calculating the ma...

  9. Measuring Extinction with ALE

    Science.gov (United States)

    Zimmer, Peter C.; McGraw, J. T.; Gimmestad, G. G.; Roberts, D.; Stewart, J.; Smith, J.; Fitch, J.

    2007-12-01

    ALE (Astronomical LIDAR for Extinction) is deployed at the University of New Mexico's (UNM) Campus Observatory in Albuquerque, NM. It has begun a year-long testing phase prior deployment at McDonald Observatory in support of the CCD/Transit Instrument II (CTI-II). ALE is designed to produce a high-precision measurement of atmospheric absorption and scattering above the observatory site every ten minutes of every moderately clear night. LIDAR (LIght Detection And Ranging) is the VIS/UV/IR analog of radar, using a laser, telescope and time-gated photodetector instead of a radio transmitter, dish and receiver. In the case of ALE -- an elastic backscatter LIDAR -- 20ns-long, eye-safe laser pulses are launched 2500 times per second from a 0.32m transmitting telescope co-mounted with a 50mm short-range receiver on an alt-az mounted 0.67m long-range receiver. Photons from the laser pulse are scattered and absorbed as the pulse propagates through the atmosphere, a portion of which are scattered into the field of view of the short- and long-range receiver telescopes and detected by a photomultiplier. The properties of a given volume of atmosphere along the LIDAR path are inferred from both the altitude-resolved backscatter signal as well as the attenuation of backscatter signal from altitudes above it. We present ALE profiles from the commissioning phase and demonstrate some of the astronomically interesting atmospheric information that can be gleaned from these data, including, but not limited to, total line-of-sight extinction. This project is funded by NSF Grant 0421087.

  10. Rewinding the process of mammalian extinction.

    Science.gov (United States)

    Saragusty, Joseph; Diecke, Sebastian; Drukker, Micha; Durrant, Barbara; Friedrich Ben-Nun, Inbar; Galli, Cesare; Göritz, Frank; Hayashi, Katsuhiko; Hermes, Robert; Holtze, Susanne; Johnson, Stacey; Lazzari, Giovanna; Loi, Pasqualino; Loring, Jeanne F; Okita, Keisuke; Renfree, Marilyn B; Seet, Steven; Voracek, Thomas; Stejskal, Jan; Ryder, Oliver A; Hildebrandt, Thomas B

    2016-07-01

    With only three living individuals left on this planet, the northern white rhinoceros (Ceratotherium simum cottoni) could be considered doomed for extinction. It might still be possible, however, to rescue the (sub)species by combining novel stem cell and assisted reproductive technologies. To discuss the various practical options available to us, we convened a multidisciplinary meeting under the name "Conservation by Cellular Technologies." The outcome of this meeting and the proposed road map that, if successfully implemented, would ultimately lead to a self-sustaining population of an extremely endangered species are outlined here. The ideas discussed here, while centered on the northern white rhinoceros, are equally applicable, after proper adjustments, to other mammals on the brink of extinction. Through implementation of these ideas we hope to establish the foundation for reversal of some of the effects of what has been termed the sixth mass extinction event in the history of Earth, and the first anthropogenic one. Zoo Biol. 35:280-292, 2016. © 2016 The Authors. Zoo Biology published by Wiley Periodicals, Inc.

  11. The end-Permian mass extinction: A complex, multicausal extinction

    Science.gov (United States)

    Erwin, D. H.

    1994-01-01

    The end-Permian mass extinction was the most extensive in the history of life and remains one of the most complex. Understanding its causes is particularly important because it anchors the putative 26-m.y. pattern of periodic extinction. However, there is no good evidence for an impact and this extinction appears to be more complex than others, involving at least three phases. The first began with the onset of a marine regression during the Late Permian and resulting elimination of most marine basins, reduction in habitat area, and increased climatic instability; the first pulse of tetrapod extinctions occurred in South Africa at this time. The second phase involved increased regression in many areas (although apparently not in South China) and heightened climatic instability and environmental degradation. Release of gas hydrates, oxidation of marine carbon, and the eruption of the Siberian flood basalts occurred during this phase. The final phase of the extinction episode began with the earliest Triassic marine regression and destruction of nearshore continental habitats. Some evidence suggests oceanic anoxia may have developed during the final phase of the extinction, although it appears to have been insufficient to the sole cause of the extinction.

  12. Extinction and recolonization of coastal megafauna following human arrival in New Zealand.

    Science.gov (United States)

    Collins, Catherine J; Rawlence, Nicolas J; Prost, Stefan; Anderson, Christian N K; Knapp, Michael; Scofield, R Paul; Robertson, Bruce C; Smith, Ian; Matisoo-Smith, Elizabeth A; Chilvers, B Louise; Waters, Jonathan M

    2014-07-01

    Extinctions can dramatically reshape biological communities. As a case in point, ancient mass extinction events apparently facilitated dramatic new evolutionary radiations of surviving lineages. However, scientists have yet to fully understand the consequences of more recent biological upheaval, such as the megafaunal extinctions that occurred globally over the past 50 kyr. New Zealand was the world's last large landmass to be colonized by humans, and its exceptional archaeological record documents a vast number of vertebrate extinctions in the immediate aftermath of Polynesian arrival approximately AD 1280. This recently colonized archipelago thus presents an outstanding opportunity to test for rapid biological responses to extinction. Here, we use ancient DNA (aDNA) analysis to show that extinction of an endemic sea lion lineage (Phocarctos spp.) apparently facilitated a subsequent northward range expansion of a previously subantarctic-limited lineage. This finding parallels a similar extinction-replacement event in penguins (Megadyptes spp.). In both cases, an endemic mainland clade was completely eliminated soon after human arrival, and then replaced by a genetically divergent clade from the remote subantarctic region, all within the space of a few centuries. These data suggest that ecological and demographic processes can play a role in constraining lineage distributions, even for highly dispersive species, and highlight the potential for dynamic biological responses to extinction.

  13. Does inbreeding affect the extinction risk of small populations? predictions from Drosophila

    NARCIS (Netherlands)

    Bijlsma, R; Bundgaard, J; Boerema, AC

    2000-01-01

    A fundamental assumption underlying the importance of genetic risks within conservation biology is that inbreeding increases the extinction probability of populations. Although inbreeding has been shown to have a detrimental impact on individual fitness, its contribution to extinction is still poorl

  14. Selective and Protracted Effect of Nifedipine on Fear Memory Extinction Correlates with Induced Stress Response

    Science.gov (United States)

    Waltereit, Robert; Mannhardt, Sonke; Nescholta, Sabine; Maser-Gluth, Christiane; Bartsch, Dusan

    2008-01-01

    Memory extinction, defined as a decrease of a conditioned response as a function of a non-reinforced conditioned stimulus presentation, has high biological and clinical relevance. Extinction is not a passive reversing or erasing of the plasticity associated with acquisition, but a novel, active learning process. Nifedipine blocks L-type voltage…

  15. Functional Extinctions of Species in Ecological Networks

    OpenAIRE

    Säterberg, Torbjörn

    2016-01-01

    Current rates of extinctions are estimated to be around 1000 times higher than background rates that would occur without anthropogenic impacts. These extinction rates refer to the traditional view of extinctions, i.e. numerical extinctions. This thesis is about another type of extinctions: functional extinctions. Those occur when the abundance of a species is too small to uphold the species’ ecologically interactive role. I have taken a theoretical approach and used dynamical models to invest...

  16. Opportunities and costs for preventing vertebrate extinctions.

    Science.gov (United States)

    Conde, Dalia A; Colchero, Fernando; Güneralp, Burak; Gusset, Markus; Skolnik, Ben; Parr, Michael; Byers, Onnie; Johnson, Kevin; Young, Glyn; Flesness, Nate; Possingham, Hugh; Fa, John E

    2015-03-16

    Despite an increase in policy and management responses to the global biodiversity crisis, implementation of the 20 Aichi Biodiversity Targets still shows insufficient progress [1]. These targets, strategic goals defined by the United Nations Convention on Biological Diversity (CBD), address major causes of biodiversity loss in part by establishing protected areas (Target 11) and preventing species extinctions (Target 12). To achieve this, increased interventions will be required for a large number of sites and species. The Alliance for Zero Extinction (AZE) [2], a consortium of conservation-oriented organisations that aims to protect Critically Endangered and Endangered species restricted to single sites, has identified 920 species of mammals, birds, amphibians, reptiles, conifers and reef-building corals in 588 'trigger' sites [3]. These are arguably the most irreplaceable category of important biodiversity conservation sites. Protected area coverage of AZE sites is a key indicator of progress towards Target 11 [1]. Moreover, effective conservation of AZE sites is essential to achieve Target 12, as the loss of any of these sites would certainly result in the global extinction of at least one species [2]. However, averting human-induced species extinctions within AZE sites requires enhanced planning tools to increase the chances of success [3]. Here, we assess the potential for ensuring the long-term conservation of AZE vertebrate species (157 mammals, 165 birds, 17 reptiles and 502 amphibians) by calculating a conservation opportunity index (COI) for each species. The COI encompasses a set of measurable indicators that quantify the possibility of achieving successful conservation of a species in its natural habitat (COIh) and by establishing insurance populations in zoos (COIc).

  17. Linking indices for biodiversity monitoring to extinction risk theory.

    Science.gov (United States)

    McCarthy, Michael A; Moore, Alana L; Krauss, Jochen; Morgan, John W; Clements, Christopher F

    2014-12-01

    Biodiversity indices often combine data from different species when used in monitoring programs. Heuristic properties can suggest preferred indices, but we lack objective ways to discriminate between indices with similar heuristics. Biodiversity indices can be evaluated by determining how well they reflect management objectives that a monitoring program aims to support. For example, the Convention on Biological Diversity requires reporting about extinction rates, so simple indices that reflect extinction risk would be valuable. We developed 3 biodiversity indices that are based on simple models of population viability that relate extinction risk to abundance. We based the first index on the geometric mean abundance of species and the second on a more general power mean. In a third index, we integrated the geometric mean abundance and trend. These indices require the same data as previous indices, but they also relate directly to extinction risk. Field data for butterflies and woodland plants and experimental studies of protozoan communities show that the indices correlate with local extinction rates. Applying the index based on the geometric mean to global data on changes in avian abundance suggested that the average extinction probability of birds has increased approximately 1% from 1970 to 2009.

  18. The learning of fear extinction.

    Science.gov (United States)

    Furini, Cristiane; Myskiw, Jociane; Izquierdo, Ivan

    2014-11-01

    Recent work on the extinction of fear-motivated learning places emphasis on its putative circuitry and on its modulation. Extinction is the learned inhibition of retrieval of previously acquired responses. Fear extinction is used as a major component of exposure therapy in the treatment of fear memories such as those of the posttraumatic stress disorder (PTSD). It is initiated and maintained by interactions between the hippocampus, basolateral amygdala and ventromedial prefrontal cortex, which involve feedback regulation of the latter by the other two areas. Fear extinction depends on NMDA receptor activation. It is positively modulated by d-serine acting on the glycine site of NMDA receptors and blocked by AP5 (2-amino-5-phosphono propionate) in the three structures. In addition, histamine acting on H2 receptors and endocannabinoids acting on CB1 receptors in the three brain areas mentioned, and muscarinic cholinergic fibers from the medial septum to hippocampal CA1 positively modulate fear extinction. Importantly, fear extinction can be made state-dependent on circulating epinephrine, which may play a role in situations of stress. Exposure to a novel experience can strongly enhance the consolidation of fear extinction through a synaptic tagging and capture mechanism; this may be useful in the therapy of states caused by fear memory like PTSD.

  19. Mass Extinctions in Earth's History

    Science.gov (United States)

    Ward, P. D.

    2002-12-01

    Mass extinctions are short intervals of elevated species death. Possible causes of Earth's mass extinctions are both external (astronomical) and internal (tectonic and biotic changes from planetary mechanisms). Paleontologists have identified five "major" mass extinctions (>50 die-off in less than a million years) and more than 20 other minor events over the past 550 million years. Earlier major extinction events undoubtedly also occurred, but we have no fossil record; these were probably associated with, for example, the early heavy bombardment that cleared out the solar system, the advent of oxygen in the atmosphere, and various "snowball Earth" events. Mass extinctions are viewed as both destructive (species death ) and constructive, in that they allow evolutionary innovation in the wake of species disappearances. From an astrobiological perspective, mass extinctions must be considered as able both to reduce biodiversity and even potentially end life on any planet. Of the five major mass extinctions identified on Earth, only one (the Cretaceous/Tertiary event 65 million years ago that famously killed off the dinosaurs ) is unambiguously related to the impact of an asteroid or comet ( 10-km diameter). The Permian/Triassic (250 Myr ago) and Triassic/Jurassic (202 Myr ago) events are now the center of debate between those favoring impact and those suggesting large volume flooding by basaltic lavas. The final two events, Ordovician (440 Myr ago) and Devonian (370 Myr ago) have no accepted causal mechanisms.

  20. Periodic Impact Cratering and Extinction Events Over the Last 260 Million Years

    Science.gov (United States)

    Rampino, Michael R.; Caldeira, Ken

    2015-01-01

    The claims of periodicity in impact cratering and biological extinction events are controversial. Anewly revised record of dated impact craters has been analyzed for periodicity, and compared with the record of extinctions over the past 260 Myr. A digital circular spectral analysis of 37 crater ages (ranging in age from 15 to 254 Myr ago) yielded evidence for a significant 25.8 +/- 0.6 Myr cycle. Using the same method, we found a significant 27.0 +/- 0.7 Myr cycle in the dates of the eight recognized marine extinction events over the same period. The cycles detected in impacts and extinctions have a similar phase. The impact crater dataset shows 11 apparent peaks in the last 260 Myr, at least 5 of which correlate closely with significant extinction peaks. These results suggest that the hypothesis of periodic impacts and extinction events is still viable.

  1. The Sixth Great Mass Extinction

    Science.gov (United States)

    Wagler, Ron

    2012-01-01

    Five past great mass extinctions have occurred during Earth's history. Humanity is currently in the midst of a sixth, human-induced great mass extinction of plant and animal life (e.g., Alroy 2008; Jackson 2008; Lewis 2006; McDaniel and Borton 2002; Rockstrom et al. 2009; Rohr et al. 2008; Steffen, Crutzen, and McNeill 2007; Thomas et al. 2004;…

  2. Extinction, relapse, and behavioral momentum.

    Science.gov (United States)

    Podlesnik, Christopher A; Shahan, Timothy A

    2010-05-01

    Previous experiments on behavioral momentum have shown that relative resistance to extinction of operant behavior in the presence of a discriminative stimulus depends upon the baseline rate or magnitude of reinforcement associated with that stimulus (i.e., the Pavlovian stimulus-reinforcer relation). Recently, we have shown that relapse of operant behavior in reinstatement, resurgence, and context renewal preparations also is a function of baseline stimulus-reinforcer relations. In this paper we present new data examining the role of baseline stimulus-reinforcer relations on resistance to extinction and relapse using a variety of baseline training conditions and relapse operations. Furthermore, we evaluate the adequacy of a behavioral momentum based model in accounting for the results. The model suggests that relapse occurs as a result of a decrease in the disruptive impact of extinction precipitated by a change in circumstances associated with extinction, and that the degree of relapse is a function of the pre-extinction baseline Pavlovian stimulus-reinforcer relation. Across experiments, relative resistance to extinction and relapse were greater in the presence of stimuli associated with more favorable conditions of reinforcement and were positively related to one another. In addition, the model did a good job in accounting for these effects. Thus, behavioral momentum theory may provide a useful quantitative approach for characterizing how differential reinforcement conditions contribute to relapse of operant behavior.

  3. Thermal Transgressions and Phanerozoic Extinctions

    Science.gov (United States)

    Worsley, T. R.; Kidder, D. L.

    2007-12-01

    A number of significant Phanerozoic extinctions are associated with marine transgressions that were probably driven by rapid ocean warming. The conditions associated with what we call thermal transgressions are extremely stressful to life on Earth. The Earth system setting associated with end-Permian extinction exemplifies an end-member case of our model. The conditions favoring extreme warmth and sea-level increases driven by thermal expansion are also conducive to changes in ocean circulation that foster widespread anoxia and sulfidic subsurface ocean waters. Equable climates are characterized by reduced wind shear and weak surface ocean circulation. Late Permian and Early Triassic thermohaline circulation differs considerably from today's world, with minimal polar sinking and intensified mid-latitude sinking that delivers sulfate from shallow evaporative areas to deeper water where it is reduced to sulfide. Reduced nutrient input to oceans from land at many of the extinction intervals results from diminished silicate weathering and weakened delivery of iron via eolian dust. The falloff in iron-bearing dust leads to minimal nitrate production, weakening food webs and rendering faunas and floras more susceptible to extinction when stressed. Factors such as heat, anoxia, ocean acidification, hypercapnia, and hydrogen sulfide poisoning would significantly affect these biotas. Intervals of tectonic quiescence set up preconditions favoring extinctions. Reductions in chemical silicate weathering lead to carbon dioxide buildup, oxygen drawdown, nutrient depletion, wind and ocean current abatement, long-term global warming, and ocean acidification. The effects of extinction triggers such as large igneous provinces, bolide impacts, and episodes of sudden methane release are more potent against the backdrop of our proposed preconditions. Extinctions that have characteristics we call for in the thermal transgressions include the Early Cambrian Sinsk event, as well as

  4. High loss of plant phylogenetic and functional diversity due to simulated extinctions of pollinators and seed dispersers in a tropical savanna

    OpenAIRE

    Cianciaruso, Marcus V.; Batalha,Marco Antônio; Petchey, Owen L.

    2013-01-01

    Identification of the factors driving extinctions is fundamental to conservation biology. Here, we assessed the likely consequences of extinction of pollinators and dispersers for phylogenetic and functional diversity of savanna woody plant species. Loss of phylogenetic diversity was greater than expected by chance in simulated extinctions of moth- and beetle-pollinated species, and bird- and mammal-dispersed species. In extinction simulations of bee and bat-pollinated species, the loss of fu...

  5. The extinction of the dinosaurs.

    Science.gov (United States)

    Brusatte, Stephen L; Butler, Richard J; Barrett, Paul M; Carrano, Matthew T; Evans, David C; Lloyd, Graeme T; Mannion, Philip D; Norell, Mark A; Peppe, Daniel J; Upchurch, Paul; Williamson, Thomas E

    2015-05-01

    Non-avian dinosaurs went extinct 66 million years ago, geologically coincident with the impact of a large bolide (comet or asteroid) during an interval of massive volcanic eruptions and changes in temperature and sea level. There has long been fervent debate about how these events affected dinosaurs. We review a wealth of new data accumulated over the past two decades, provide updated and novel analyses of long-term dinosaur diversity trends during the latest Cretaceous, and discuss an emerging consensus on the extinction's tempo and causes. Little support exists for a global, long-term decline across non-avian dinosaur diversity prior to their extinction at the end of the Cretaceous. However, restructuring of latest Cretaceous dinosaur faunas in North America led to reduced diversity of large-bodied herbivores, perhaps making communities more susceptible to cascading extinctions. The abruptness of the dinosaur extinction suggests a key role for the bolide impact, although the coarseness of the fossil record makes testing the effects of Deccan volcanism difficult.

  6. Measuring Galactic Extinction A Test

    CERN Document Server

    Arce, H G; Arce, Hector G.; Goodman, Alyssa A.

    1999-01-01

    We test the recently published all-sky reddening map of Schlegel, Finkbeiner & Davis (1998 [SFD]) using the extinction study of a region in the Taurus dark cloud complex by Arce & Goodman (1999 [AG]). In their study, AG use four different techniques to measure the amount and structure of the extinction toward Taurus, and all four techniques agree very well. Thus we believe that the AG results are a truthful representation of the extinction in the region and can be used to test the reliability of the SFD reddening map. The results of our test show that the SFD all-sky reddening map, which is based on data from COBE/DIRBE and IRAS/ISSA, overestimates the reddening by a factor of 1.3 to 1.5 in regions of smooth extinction with A_V > 0.5 mag. In some regions of steep extinction gradients the SFD map underestimates the reddening value, probably due to its low spatial resolution. We expect that the astronomical community will be using the SFD reddening map extensively. We offer this Letter as a cautionary n...

  7. Deforestation and avian extinction on tropical landbridge islands.

    Science.gov (United States)

    Sodhi, Navjot S; Wilcove, David S; Lee, Tien Ming; Sekercioglu, Cagan H; Subaraj, R; Bernard, Henry; Yong, Ding Li; Lim, Susan L H; Prawiradilaga, Dewi M; Brook, Barry W

    2010-10-01

    There are few empirical data, particularly collected simultaneously from multiple sites, on extinctions resulting from human-driven land-use change. Southeast Asia has the highest deforestation rate in the world, but the resulting losses of biological diversity remain poorly documented. Between November 2006 and March 2008, we conducted bird surveys on six landbridge islands in Malaysia and Indonesia. These islands were surveyed previously for birds in the early 1900 s, when they were extensively forested. Our bird inventories of the islands were nearly complete, as indicated by sampling saturation curves and nonparametric true richness estimators. From zero (Pulau Malawali and Pulau Mantanani) to 15 (Pulau Bintan) diurnal resident landbird species were apparently extirpated since the early 1900 s. Adding comparable but published extinction data from Singapore to our regression analyses, we found there were proportionally fewer forest bird extinctions in areas with greater remaining forest cover. Nevertheless, the statistical evidence to support this relationship was weak, owing to our unavoidably small sample size. Bird species that are restricted to the Indomalayan region, lay few eggs, are heavier, and occupy a narrower habitat breadth, were most vulnerable to extinction on Pulau Bintan. This was the only island where sufficient data existed to analyze the correlates of extinction. Forest preservation and restoration are needed on these islands to conserve the remaining forest avifauna. Our study of landbridge islands indicates that deforestation may increasingly threaten Southeast Asian biodiversity.

  8. From dinosaurs to dodos: who could and should we de-extinct?

    Directory of Open Access Journals (Sweden)

    Kate Elizabeth Jones

    2014-03-01

    Full Text Available Reviving extinct species with new synthetic biology tools is as exciting an idea as it is controversial. Genomic manipulation of extinct species’ close relatives and/or cloning suitably preserved cells are the two main ways synthetic biology could be used to revive species. Discussions of where to target initial revival efforts have focused on species’ charisma (e.g. Woolly mammoth, Passenger pigeon with less emphasis on feasibility or the ecological, ethical and legal considerations. Here I discuss who we could and should de-extinct, focussing on these latter criteria. Given the current devastating anthropogenic pressures on biodiversity, I suggest that a better use of de-extinction technologies would be to focus them on preventing species extinctions by restoring populations of critically endangered species. For example, this could be through increasing population numbers through cloning or genomic manipulation to better enable susceptible species to adapt to global change or by restoring genetic diversity by reviving extinct sub-species (e.g. Quagga, Barbary lion. This idea circumvents many of the criticisms of de-extinction from conservationists, whilst retaining public interest in de-extinction.

  9. Testing for variation in taxonomic extinction probabilities: a suggested methodology and some results

    Science.gov (United States)

    Conroy, M.J.; Nichols, J.D.

    1984-01-01

    Several important questions in evolutionary biology and paleobiology involve sources of variation in extinction rates. In all cases of which we are aware, extinction rates have been estimated from data in which the probability that an observation (e.g., a fossil taxon) will occur is related both to extinction rates and to what we term encounter probabilities. Any statistical method for analyzing fossil data should at a minimum permit separate inferences on these two components. We develop a method for estimating taxonomic extinction rates from stratigraphic range data and for testing hypotheses about variability in these rates. We use this method to estimate extinction rates and to test the hypothesis of constant extinction rates for several sets of stratigraphic range data. The results of our tests support the hypothesis that extinction rates varied over the geologic time periods examined. We also present a test that can be used to identify periods of high or low extinction probabilities and provide an example using Phanerozoic invertebrate data. Extinction rates should be analyzed using stochastic models, in which it is recognized that stratigraphic samples are random varlates and that sampling is imperfect

  10. Mass extinctions and supernova explosions

    CERN Document Server

    Korschinek, Gunther

    2016-01-01

    A nearby supernova (SN) explosion could have negatively influenced life on Earth, maybe even been responsible for mass extinctions. Mass extinction poses a significant extinction of numerous species on Earth, as recorded in the paleontologic, paleoclimatic, and geological record of our planet. Depending on the distance between the Sun and the SN, different types of threats have to be considered, such as ozone depletion on Earth, causing increased exposure to the Sun's ultraviolet radiation, or the direct exposure of lethal x-rays. Another indirect effect is cloud formation, induced by cosmic rays in the atmosphere which result in a drop in the Earth's temperature, causing major glaciations of the Earth. The discovery of highly intensive gamma ray bursts (GRBs), which could be connected to SNe, initiated further discussions on possible life-threatening events in Earth's history. The probability that GRBs hit the Earth is very low. Nevertheless, a past interaction of Earth with GRBs and/or SNe cannot be exclude...

  11. Science observed: The mass-extinction debates

    Science.gov (United States)

    Glen, W.

    1994-01-01

    The upheaval triggered in 1980 by the Alvarez-Berkeley group impact hypothesis transformed the literature of mass extinctions from an unfocused, sporadic collection of papers that virtually ignored extraterrestrial causes and treated endogenous ones only sparingly better to an integrated, diverse body of literature. Research programs organized seemingly overnight spawned collaborative teams whose members, often from distant, isolated disciplines, redirected their careers in order to address the captivating, high-stakes issues. The initial, generally skeptical, cool reception of the impact hypothesis might have been predicted for any of a number of reasons: such an instantaneous catastrophe contravened earth science's reigning philosophy of uniformitarianism; it was formulated from a form of evidence - siderophile element anomalies - alien to the community charged with its appraisal; it advanced a causal mechanism that was improbable in terms of canonical knowledge; and it was proffered mainly by specialists alien to earth and biological science, especially paleobiology. Early on it became clear that irrespective of which causal hypothesis was chosen, the chosen one would be the strongest predictor of how the chooser would select and apply standards in assessing evidence bearing on all such hypothesis. Less strong correlation also appeared between disciplinary speciality and the assessment of evidence. Such correlations varied with the level of specialization; the most robust correlations appeared in the broadest areas of science practice. The gestalt (mindset) seemingly engendered by the embrace of an extinction hypothesis overrode, or was stronger than, the intellectual predispositions attributable to disciplinary specialty.

  12. Habituation, latent inhibition, and extinction.

    Science.gov (United States)

    Jordan, Wesley P; Todd, Travis P; Bucci, David J; Leaton, Robert N

    2015-06-01

    In two conditioned suppression experiments with a latent inhibition (LI) design, we measured the habituation of rats in preexposure, their LI during conditioning, and then extinction over days. In the first experiment, lick suppression, the preexposed group (PE) showed a significant initial unconditioned response (UR) to the target stimulus and significant long-term habituation (LTH) of that response over days. The significant difference between the PE and nonpreexposed (NPE) groups on the first conditioning trial was due solely to the difference in their URs to the conditioned stimulus (CS)-a habituated response (PE) and an unhabituated response (NPE). In the second experiment, bar-press suppression, little UR to the target stimulus was apparent during preexposure, and no detectable LTH. Thus, there was no difference between the PE and NPE groups on the first conditioning trial. Whether the UR to the CS confounds the interpretation of LI (Exp. 1) or not (Exp. 2) can only be known if the UR is measured. In both experiments, LI was observed in acquisition. Also in both experiments, rats that were preexposed and then conditioned to asymptote were significantly more resistant to extinction than were the rats not preexposed. This result contrasts with the consistently reported finding that preexposure either produces less resistance to extinction or has no effect on extinction. The effect of stimulus preexposure survived conditioning to asymptote and was reflected directly in extinction. These two experiments provide a cautionary procedural note for LI experiments and have shown an unexpected extinction effect that may provide new insights into the interpretation of LI.

  13. Extinction risk of soil biota.

    Science.gov (United States)

    Veresoglou, Stavros D; Halley, John M; Rillig, Matthias C

    2015-11-23

    No species lives on earth forever. Knowing when and why species go extinct is crucial for a complete understanding of the consequences of anthropogenic activity, and its impact on ecosystem functioning. Even though soil biota play a key role in maintaining the functioning of ecosystems, the vast majority of existing studies focus on aboveground organisms. Many questions about the fate of belowground organisms remain open, so the combined effort of theorists and applied ecologists is needed in the ongoing development of soil extinction ecology.

  14. Interstellar Grains: Effect of Inclusions on Extinction

    CERN Document Server

    Katyal, Nisha; Vaidya, D B

    2011-01-01

    A composite dust grain model which simultaneously explains the observed interstellar extinction, polarization, IR emission and the abundance constraints, is required. We present a composite grain model, which is made up of a host silicate oblate spheroid and graphite inclusions. The interstellar extinction curve is evaluated in the spectral region 3.4-0.1$\\mu m$ using the extinction efficiencies of the composite spheroidal grains for three axial ratios. Extinction curves are computed using the discrete dipole approximation (DDA). The model curves are subsequently compared with the average observed interstellar extinction curve and with an extinction curve derived from the IUE catalogue data.

  15. Interstellar grains: Effect of inclusions on extinction

    Science.gov (United States)

    Katyal, N.; Gupta, R.; Vaidya, D. B.

    2011-10-01

    A composite dust grain model which simultaneously explains the observed interstellar extinction, polarization, IR emission and the abundance constraints, is required. We present a composite grain model, which is made up of a host silicate oblate spheroid and graphite inclusions. The interstellar extinction curve is evaluated in the spectral region 3.4-0.1 μm using the extinction efficiencies of composite spheroidal grains for three axial ratios. Extinction curves are computed using the discrete dipole approximation (DDA). The model curves are subsequently compared with the average observed interstellar extinction curve and with an extinction curve derived from the IUE catalogue data.

  16. Endangered and Extinct Radioactivity

    Science.gov (United States)

    Leising, M. D.

    1993-07-01

    Gamma ray spectroscopy holds great promise for probing nucleosynthesis in individual nucleosynthesis events, via observations of short-lived radioactivity, and for measuring global galactic nucleosynthesis today with detections of longer-lived radioactivity. Many of the astrophysical issues addressed by these observations are precisely those that must be understood in order to interpret observations of extinct radioactivity in meteorites. It was somewhat surprising that the former case was realized first for a Type II supernova, when both 56Co [1] and 57Co [2] were detected in SN 1987A. These provide unprecedented constraints on models of Type II explosions. Live 26Al in the galaxy might come from Type II supernovae and their progenitors, and if this is eventually shown to be the case, can constrain massive star evolution, supernova nucleosynthesis, the galactic Type II supernova rate, and even models of the chemical evolution of the galaxy [3]. Titanium-44 is produced primarily in the alpha-rich freezeout from nuclear statistical equilibrium, possibly in Type Ia [4] and almost certainly in Type II supernovae [5]. The galactic recurrence time of these events is comparable to the 44Ti lifetime, so we expect to be able to see at most a few otherwise unseen 44Ti remnants at any given time. No such remnants have been detected yet [6]. Very simple arguments lead to the expectation that about 4 x 10^-4 M(sub)solar mass of 44Ca are produced per century. The product of the supernova frequency times the 44Ti yield per event must equal this number. Even assuming that only the latest event would be seen, rates in excess of 2 century^-1 are ruled out at >=99% confidence by the gamma ray limits. Only rates less than 0.3 century^-1 are acceptable at >5% confidence, and this means that the yield per event must be >10^-3 M(sub)solar mass to produce the requisite 44Ca. Rates this low are incompatible with current estimates for Type II supernovae and yields this high are also very

  17. Extinction debt on oceanic islands

    DEFF Research Database (Denmark)

    Triantis, K.A.; Borges, Paulo A. V.; Ladle, R.J.;

    2010-01-01

    the magnitude of such future extinction events has been hampered by potentially inaccurate assumptions about the slope of species-area relationships, which are habitat- and taxon-specific. We overcome this challenge by applying a method that uses the historical sequence of deforestation in the Azorean Islands...

  18. A model of mass extinction

    CERN Document Server

    Newman, M E J

    1997-01-01

    A number of authors have in recent years proposed that the processes of macroevolution may give rise to self-organized critical phenomena which could have a significant effect on the dynamics of ecosystems. In particular it has been suggested that mass extinction may arise through a purely biotic mechanism as the result of so-called coevolutionary avalanches. In this paper we first explore the empirical evidence which has been put forward in favor of this conclusion. The data center principally around the existence of power-law functional forms in the distribution of the sizes of extinction events and other quantities. We then propose a new mathematical model of mass extinction which does not rely on coevolutionary effects and in which extinction is caused entirely by the action of environmental stresses on species. In combination with a simple model of species adaptation we show that this process can account for all the observed data without the need to invoke coevolution and critical processes. The model al...

  19. Interstellar Extinction by Spheroidal Dust Grains

    OpenAIRE

    Gupta, Ranjan; Mukai, Tadashi; Vaidya, D. B.; Sen, Asoke K.; Okada, Yasuhiko

    2005-01-01

    Observations of interstellar extinction and polarization indicate that the interstellar medium consists of aligned non-spherical dust grains which show variation in the interstellar extinction curve for wavelengths ranging from NIR to UV. To model the extinction and polarization, one cannot use the Mie theory which assumes the grains as solid spheres. We have used a T-matrix based method for computing the extinction efficiencies of spheroidal silicate and graphite grains of different shapes (...

  20. A Protection plan of wildlife in a danger of extinction

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Sang Don; Park, Yong Ha; Suh, Jung Soo [Korea Environment Institute, Seoul (Korea)

    1998-12-01

    This report collected data on the present situation of mammals, birds, amphibians, reptiles, fishes, insects, invertebrates, and 43 kinds of plants, which is in a danger of extinction, and their habitat, by the article 2 of 1998 Natural Environmental Conservation Act, as a part of 'Establishment of Biological diversity strategy'. This will utilize as a basic data for protection management to establish the recovery plan for each species. 358 refs., 43 figs., 3 tabs.

  1. Tidal Effects of Passing Planets and Mass Extinctions

    CERN Document Server

    Fargion, D; Fargion, Daniele; Dar, Arnon

    1998-01-01

    Recent observations suggest that many planetary-mass objects may be present in the outer solar system between the Kuiper belt and the Oort cloud. Gravitational perturbations may occasionally bring them into the inner solar system. Their passage near Earth could have generated gigantic tidal waves, large volcanic eruptions, sea regressions, large meteoritic impacts and drastic changes in global climate. They could have caused the major biological mass extinctions in the past 600 My as documented in the geological records.

  2. Further Evidence of Auditory Extinction in Aphasia

    Science.gov (United States)

    Marshall, Rebecca Shisler; Basilakos, Alexandra; Love-Myers, Kim

    2013-01-01

    Purpose: Preliminary research ( Shisler, 2005) suggests that auditory extinction in individuals with aphasia (IWA) may be connected to binding and attention. In this study, the authors expanded on previous findings on auditory extinction to determine the source of extinction deficits in IWA. Method: Seventeen IWA (M[subscript age] = 53.19 years)…

  3. Determining Extinction Ratio Of A Laser Diode

    Science.gov (United States)

    Unger, Glenn L.

    1992-01-01

    Improved technique to determine extinction ratio of pulsed laser diode based partly on definition of extinction ratio applicable to nonideal laser pulses. Heretofore, determinations involved assumption of ideal laser pulses, and neglected optical power from background light. Because power fluctuates during real pulse, more realistic to define extinction ratio in terms of energy obtained.

  4. Development of Extinction Imagers for the Determination of Atmospheric Optical Extinction

    Science.gov (United States)

    2014-08-01

    extinction coefficient > 0.4 km" ), the transmissometer tends to report higher values than the MSI. There are two possible reasons for this behavior ...REPORT TYPE Final Report 4. TITLE AND SUBTITLE Development of Extinction Imagers for the Determination of Atmospheric Optical Extinction 6. AUTHOR...further develop Extinction Imagers for use in the ocean environment, and to extend the capabilities into the Short Wave IR (SWIR). Extinction Imaging

  5. A comparative analysis of specialization and extinction risk in temperate-zone bats.

    OpenAIRE

    2004-01-01

    Identifying the factors that influence the extinction risk of animals is essential in conservation biology because they help identify endangered species and provide the basis for their preservation.We present a comparative study that uses data from the literature on the diet and morphological specialization of European and North American bat species to investigate the effect of specialization on extinction risk. We focused on bats because many species are endangered and their high ecologic...

  6. The Lopingian Series of China and End-Permian Mass Extinction

    Institute of Scientific and Technical Information of China (English)

    JIN Yugan; SHEN Shuzhong; WANG Xiangdong; WANG Yue; CAO Changqun

    2011-01-01

    The end-Permian mass extinction is the greatest bioevent in the geological history, which wiped out nearly 95% of the marine species and 75% of the terrestrial species,followed by a biological winter for more than five million years.The cause and the process of the end-Permian mass extinction remain an unsolved mystery in earth science and one of the most difficult and interesting scientific problems.

  7. Neanderthal extinction by competitive exclusion.

    Directory of Open Access Journals (Sweden)

    William E Banks

    Full Text Available BACKGROUND: Despite a long history of investigation, considerable debate revolves around whether Neanderthals became extinct because of climate change or competition with anatomically modern humans (AMH. METHODOLOGY/PRINCIPAL FINDINGS: We apply a new methodology integrating archaeological and chronological data with high-resolution paleoclimatic simulations to define eco-cultural niches associated with Neanderthal and AMH adaptive systems during alternating cold and mild phases of Marine Isotope Stage 3. Our results indicate that Neanderthals and AMH exploited similar niches, and may have continued to do so in the absence of contact. CONCLUSIONS/SIGNIFICANCE: The southerly contraction of Neanderthal range in southwestern Europe during Greenland Interstadial 8 was not due to climate change or a change in adaptation, but rather concurrent AMH geographic expansion appears to have produced competition that led to Neanderthal extinction.

  8. Extinction risk and structure of a food web model

    CERN Document Server

    PÈ©kalski, A; Bena, I; Droz, M

    2007-01-01

    We investigate in detail the model of a trophic web proposed by Amaral and Meyer [Phys. Rev. Lett. 82, 652 (1999)]. We focused on small-size systems that are relevant for real biological food webs and for which the fluctuations are playing an important role. We show, using Monte Carlo simulations, that such webs can be non-viable, leading to extinction of all species in small and/or weakly coupled systems. Estimations of the extinction times and survival chances are also given. We show that before the extinction the fraction of highly-connected species ("omnivores") is increasing. Viable food webs exhibit a pyramidal structure, where the density of occupied niches is higher at lower trophic levels, and moreover the occupations of adjacent levels are closely correlated. We also demonstrate that the distribution of the lengths of food chains has an exponential character and changes weakly with the parameters of the model. On the contrary, the distribution of avalanche sizes of the extinct species depends strong...

  9. Predicting the process of extinction in experimental microcosms and accounting for interspecific interactions in single-species time series.

    Science.gov (United States)

    Ferguson, Jake M; Ponciano, José M

    2014-02-01

    Predicting population extinction risk is a fundamental application of ecological theory to the practice of conservation biology. Here, we compared the prediction performance of a wide array of stochastic, population dynamics models against direct observations of the extinction process from an extensive experimental data set. By varying a series of biological and statistical assumptions in the proposed models, we were able to identify the assumptions that affected predictions about population extinction. We also show how certain autocorrelation structures can emerge due to interspecific interactions, and that accounting for the stochastic effect of these interactions can improve predictions of the extinction process. We conclude that it is possible to account for the stochastic effects of community interactions on extinction when using single-species time series.

  10. Flourishing ocean drives the end-Permian marine mass extinction.

    Science.gov (United States)

    Schobben, Martin; Stebbins, Alan; Ghaderi, Abbas; Strauss, Harald; Korn, Dieter; Korte, Christoph

    2015-08-18

    The end-Permian mass extinction, the most severe biotic crisis in the Phanerozoic, was accompanied by climate change and expansion of oceanic anoxic zones. The partitioning of sulfur among different exogenic reservoirs by biological and physical processes was of importance for this biodiversity crisis, but the exact role of bioessential sulfur in the mass extinction is still unclear. Here we show that globally increased production of organic matter affected the seawater sulfate sulfur and oxygen isotope signature that has been recorded in carbonate rock spanning the Permian-Triassic boundary. A bifurcating temporal trend is observed for the strata spanning the marine mass extinction with carbonate-associated sulfate sulfur and oxygen isotope excursions toward decreased and increased values, respectively. By coupling these results to a box model, we show that increased marine productivity and successive enhanced microbial sulfate reduction is the most likely scenario to explain these temporal trends. The new data demonstrate that worldwide expansion of euxinic and anoxic zones are symptoms of increased biological carbon recycling in the marine realm initiated by global warming. The spatial distribution of sulfidic water column conditions in shallow seafloor environments is dictated by the severity and geographic patterns of nutrient fluxes and serves as an adequate model to explain the scale of the marine biodiversity crisis. Our results provide evidence that the major biodiversity crises in Earth's history do not necessarily implicate an ocean stripped of (most) life but rather the demise of certain eukaryotic organisms, leading to a decline in species richness.

  11. Evolutionary patterns from mass originations and mass extinctions.

    Science.gov (United States)

    Hewzulla, D; Boulter, M C; Benton, M J; Halley, J M

    1999-01-01

    The Fossil Record 2 database gives a stratigraphic range of most known animal and plant families. We have used it to plot the number of families extant through time and argue for an exponential fit, rather than a logistic one, on the basis of power spectra of the residuals from the exponential. The times of origins and extinctions, when plotted for all families of marine and terrestrial organisms over the last 600 Myr, reveal different origination and extinction peaks. This suggests that patterns of biological evolution are driven by its own internal dynamics as well as responding to upsets from external causes. Spectral analysis shows that the residuals from the exponential model of the marine system are more consistent with 1/f noise suggesting that self-organized criticality phenomena may be involved. PMID:10212492

  12. A lesson in defining "extinct"

    OpenAIRE

    Asimow, Paul D.

    2014-01-01

    Toni Feder’s Issues and Events news item about the High-Altitude Water Cherenkov Gamma-Ray Observatory under construction in Mexico ( Physics Today, October 2013, page 22) begins by describing the site as “nestled at 4100 m on the slopes of Sierra Negra, an extinct volcano.” However, as the picture accompanying her piece or a cursory examination in Google Earth makes clear, the site is not on the slopes of Sierra Negra. It sits in the saddle between Sierra Negra and its much larger companion ...

  13. Extinction Maps in the WFAU Archives

    CERN Document Server

    Cross, Nicholas

    2015-01-01

    A brief set of notes about the database design for 3D maps of dust extinction in the WFAU Archives, which support data from UKIRT-WFCAM, VISTA and VST. The notes also detail typical use cases, such as getting colour-excesses, extinction-corrections, spectral energy distributions and colour-magnitude diagrams and demonstrate the SQL queries to return data, along with examples from VVV DR2 with bulge extinction maps from Chen et al. (2013).

  14. Extinction by the long dielectric needles

    CERN Document Server

    Cherkas, Nadejda L

    2016-01-01

    Electromagnetic wave extinction by the very long but finite dielectric needle is compared with that by the infinite dielectric cylinder for an oblique incidence of the electromagnetic wave. It is shown that the renormalized Hankel functions without the logarithmic terms should be used for the calculation of the extinction per unit length of the infinite dielectric cylinder to apply it for extinction calculations by the finite dielectric cylinder.

  15. The Astronomical Pulse of Global Extinction Events

    Directory of Open Access Journals (Sweden)

    David F.V. Lewis

    2006-01-01

    Full Text Available The linkage between astronomical cycles and the periodicity of mass extinctions is reviewed and discussed. In particular, the apparent 26 million year cycle of global extinctions may be related to the motion of the solar system around the galaxy, especially perpendicular to the galactic plane. The potential relevance of Milankovitch cycles is also explored in the light of current evidence for the possible causes of extinction events over a geological timescale.

  16. The astronomical pulse of global extinction events.

    Science.gov (United States)

    Lewis, David F V; Dorne, Jean-Lou C M

    2006-06-23

    The linkage between astronomical cycles and the periodicity of mass extinctions is reviewed and discussed. In particular, the apparent 26 million year cycle of global extinctions may be related to the motion of the solar system around the galaxy, especially perpendicular to the galactic plane. The potential relevance of Milankovitch cycles is also explored in the light of current evidence for the possible causes of extinction events over a geological timescale.

  17. Resistance to extinction and behavioral momentum

    OpenAIRE

    Nevin, John A.

    2012-01-01

    In the metaphor of behavioral momentum, reinforcement is assumed to strengthen discriminated operant behavior in the sense of increasing its resistance to disruption, and extinction is viewed as disruption by contingency termination and reinforcer omission. In multiple schedules of intermittent reinforcement, resistance to extinction is an increasing function of reinforcer rate, consistent with a model based on the momentum metaphor. The partial-reinforcement extinction effect, which opposes ...

  18. Enhancing Divergent Search through Extinction Events

    DEFF Research Database (Denmark)

    Lehman, Joel; Miikkulainen, Risto

    2015-01-01

    A challenge in evolutionary computation is to create representations as evolvable as those in natural evolution. This paper hypothesizes that extinction events, i.e. mass extinctions, can significantly increase evolvability, but only when combined with a divergent search algorithm, i.e. a search...... for the capacity to evolve. This hypothesis is tested through experiments in two evolutionary robotics domains. The results show that combining extinction events with divergent search increases evolvability, while combining them with convergent search offers no similar benefit. The conclusion is that extinction...... events may provide a simple and effective mechanism to enhance performance of divergent search algorithms....

  19. Dust Extinction in Compact Planetary Nebulae

    OpenAIRE

    Lee, TH; Kwok, S.

    2005-01-01

    The effects of dust extinction on the departure from axisymmetry in the morphology of planetary nebulae (PNs) are investigated through a comparison of the radio free-free emission and hydrogen recombination line images. The dust extinction maps from five compact PNs are derived using high-resolution (̃0"1) Hα and radio maps of the HST and VLA. These extinction maps are then analyzed by an ellipsoidal shell ionization model including the effects of dust extinction to infer the nebulae's intrin...

  20. Secondary extinction in Pavlovian fear conditioning.

    Science.gov (United States)

    Vurbic, Drina; Bouton, Mark E

    2011-09-01

    Pavlov (1927/1960) reported that following the conditioning of several stimuli, extinction of one conditioned stimulus (CS) attenuated responding to others that had not undergone direct extinction. However, this secondary extinction effect has not been widely replicated in the contemporary literature. In three conditioned suppression experiments with rats, we further explored the phenomenon. In Experiment 1, we asked whether secondary extinction is more likely to occur with target CSs that have themselves undergone some prior extinction. A robust secondary extinction effect was obtained with a nonextinguished target CS. Experiment 2 showed that extinction of one CS was sufficient to reduce renewal of a second CS when it was tested in a neutral (nonextinction) context. In Experiment 3, secondary extinction was observed in groups that initially received intermixed conditioning trials with the target and nontarget CSs, but not in groups that received conditioning of the two CSs in separate sessions. The results are consistent with the hypothesis that CSs must be associated with a common temporal context during conditioning for secondary extinction to occur.

  1. Climate predictors of late quaternary extinctions

    DEFF Research Database (Denmark)

    Nogués-Bravo, David; Ohlemüller, Ralf; Batra, Persaram

    2010-01-01

    Between 50,000 and 3,000 years before present (BP) 65% of mammal genera weighing over 44 kg went extinct, together with a lower proportion of small mammals. Why species went extinct in such large numbers is hotly debated. One of the arguments proposes that climate changes underlie Late Quaternary...... extinctions, but global quantitative evidence for this hypothesis is still lacking. We test the potential role of global climate change on the extinction of mammals during the Late Quaternary. Our results suggest that continents with the highest climate footprint values, in other words, with climate changes...

  2. Long-term maintenance of immediate or delayed extinction is determined by the extinction-test interval

    OpenAIRE

    Johnson, Justin S.; Escobar, Martha; Kimble, Whitney L.

    2010-01-01

    Short acquisition-extinction intervals (immediate extinction) can lead to either more or less spontaneous recovery than long acquisition-extinction intervals (delayed extinction). Using rat subjects, we observed less spontaneous recovery following immediate than delayed extinction (Experiment 1). However, this was the case only if a relatively long extinction-test interval was used; a relatively short extinction-test interval yielded the opposite result (Experiment 2). Previous data appear co...

  3. Abiotic causes of the great mass extinction of marine biota at the Triassic-Jurassic boundary

    Science.gov (United States)

    Barash, M. S.

    2015-05-01

    In the interval of the Triassic-Jurassic boundary up to 80% of marine species became extinct. The main hypotheses on the causes of this mass extinction are reviewed. The extinction was triggered by a powerful eruption of basalts in the Central Atlantic Magmatic Province. In addition, several impact craters have been found. Extraterrestrial factors resulted in two main sequences of events: terrestrial, leading to strong volcanism, and extraterrestrial (impact events). They produced similar effects: emissions of harmful chemical compounds and aerosols. Consequences included the greenhouse effect, darkening of the atmosphere (which prevented photosynthesis), stagnation of the oceans, and anoxia. Biological productivity decreased; food chains collapsed. As a result, all vital processes were disturbed, and a large portion of the biota went extinct.

  4. Extinction-Optimized Volume Illumination.

    Science.gov (United States)

    Ament, Marco; Zirr, Tobias; Dachsbacher, Carsten

    2016-05-16

    We present a novel method to optimize the attenuation of light for the single scattering model in direct volume rendering. A common problem of single scattering is the high dynamic range between lit and shadowed regions due to the exponential attenuation of light along a ray. Moreover, light is often attenuated too strong between a sample point and the camera, hampering the visibility of important features. Our algorithm employs an importance function to selectively illuminate important structures and make them visible from the camera. With the importance function, more light can be transmitted to the features of interest, while contextual structures cast shadows which provide visual cues for perception of depth. At the same time, more scattered light is transmitted from the sample point to the camera to improve the primary visibility of important features. We formulate a minimization problem that automatically determines the extinction along a view or shadow ray to obtain a good balance between sufficient transmittance and attenuation. In contrast to previous approaches, we do not require a computationally expensive solution of a global optimization, but instead provide a closed-form solution for each sampled extinction value along a view or shadow ray and thus achieve interactive performance.

  5. Phylogenetic Clustering of Origination and Extinction across the Late Ordovician Mass Extinction.

    Directory of Open Access Journals (Sweden)

    Andrew Z Krug

    Full Text Available Mass extinctions can have dramatic effects on the trajectory of life, but in some cases the effects can be relatively small even when extinction rates are high. For example, the Late Ordovician mass extinction is the second most severe in terms of the proportion of genera eliminated, yet is noted for the lack of ecological consequences and shifts in clade dominance. By comparison, the end-Cretaceous mass extinction was less severe but eliminated several major clades while some rare surviving clades diversified in the Paleogene. This disconnect may be better understood by incorporating the phylogenetic relatedness of taxa into studies of mass extinctions, as the factors driving extinction and recovery are thought to be phylogenetically conserved and should therefore promote both origination and extinction of closely related taxa. Here, we test whether there was phylogenetic selectivity in extinction and origination using brachiopod genera from the Middle Ordovician through the Devonian. Using an index of taxonomic clustering (RCL as a proxy for phylogenetic clustering, we find that A both extinctions and originations shift from taxonomically random or weakly clustered within families in the Ordovician to strongly clustered in the Silurian and Devonian, beginning with the recovery following the Late Ordovician mass extinction, and B the Late Ordovician mass extinction was itself only weakly clustered. Both results stand in stark contrast to Cretaceous-Cenozoic bivalves, which showed significant levels of taxonomic clustering of extinctions in the Cretaceous, including strong clustering in the mass extinction, but taxonomically random extinctions in the Cenozoic. The contrasting patterns between the Late Ordovician and end-Cretaceous events suggest a complex relationship between the phylogenetic selectivity of mass extinctions and the long-term phylogenetic signal in origination and extinction patterns.

  6. Selectivity of terrestrial gastropod extinctions on an oceanic archipelago and insights into the anthropogenic extinction process

    OpenAIRE

    Chiba, Satoshi; Roy, Kaustuv

    2011-01-01

    Anthropogenic impacts have led to widespread extinctions of species on oceanic islands but the nature of many of these extinctions remains poorly known. Here we investigate extinction selectivities of terrestrial gastropods from the Ogasawara archipelago in the northwest Pacific, where anthropogenic threats have changed over time, shifting primarily from the effects of habitat loss to predation by a variety of different predators. Across all of the islands, extinct species had significantly s...

  7. Timing of extinction relative to acquisition: A parametric analysis of fear extinction in humans

    NARCIS (Netherlands)

    Norrholm, S.D.; Vervliet, B.; Jovanovic, T.; Boshoven, W.; Myers, K.M.; Davis, M.; Rothbaum, B.O.; Duncan, E.J.

    2008-01-01

    Fear extinction is a reduction in conditioned fear following repeated exposure to the feared cue in the absence of any aversive event. Extinguished fear often reappears after extinction through spontaneous recovery. Animal studies suggest that spontaneous recovery can be abolished if extinction occu

  8. Constraints on Enhanced Extinction Resulting from Extinction Treatment in the Presence of an Added Excitor

    Science.gov (United States)

    Urcelay, Gonzalo P.; Lipatova, Olga; Miller, Ralph R.

    2009-01-01

    Three Pavlovian fear conditioning experiments with rats as subjects explored the effect of extinction in the presence of a concurrent excitor. Our aim was to explore this particular treatment, documented in previous studies to deepen extinction, with novel control groups to shed light on the processes involved in extinction. Relative to subjects…

  9. Long-Term Maintenance of Immediate or Delayed Extinction Is Determined by the Extinction-Test Interval

    Science.gov (United States)

    Johnson, Justin S.; Escobar, Martha; Kimble, Whitney L.

    2010-01-01

    Short acquisition-extinction intervals (immediate extinction) can lead to either more or less spontaneous recovery than long acquisition-extinction intervals (delayed extinction). Using rat subjects, we observed less spontaneous recovery following immediate than delayed extinction (Experiment 1). However, this was the case only if a relatively…

  10. Can Parallelingualism Save Norwegian from Extinction?

    Science.gov (United States)

    Linn, Andrew R.

    2010-01-01

    Language extinction is one of the most pressing issues in linguistics today, and the literature is full of discussion about how to combat it. Statements that Norwegian is amongst the languages that are already extinct are merely examples of a widespread tendency in the literature towards erroneous information about Norwegian. Nonetheless, there is…

  11. Periodicity of extinction: A 1988 update

    Science.gov (United States)

    Sepkowski, J. John, Jr.

    1988-01-01

    The hypothesis that events of mass extinction recur periodically at approximately 26 my intervals is an empirical claim based on analysis of data from the fossil record. The hypothesis has become closely linked with catastrophism because several events in the periodic series are associated with evidence of extraterrestrial impacts, and terrestrial forcing mechanisms with long, periodic recurrences are not easily conceived. Astronomical mechanisms that have been hypothesized include undetected solar companions and solar oscillation about the galactic plane, which induce comet showers and result in impacts on Earth at regular intervals. Because these mechanisms are speculative, they have been the subject of considerable controversy, as has the hypothesis of periodicity of extinction. In response to criticisms and uncertainties, a data base was developed on times of extinction of marine animal genera. A time series is given and analyzed with 49 sample points for the per-genus extinction rate from the Late Permian to the Recent. An unexpected pattern in the data is the uniformity of magnitude of many of the periodic extinction events. Observations suggest that the sequence of extinction events might be the result of two sets of mechanisms: a periodic forcing that normally induces only moderate amounts of extinction, and independent incidents or catastrophes that, when coincident with the periodic forcing, amplify its signal and produce major-mass extinctions.

  12. Extinction-Induced Variability in Human Behavior

    Science.gov (United States)

    Kinloch, Jennifer M.; Foster, T. Mary; McEwan, James S. A.

    2009-01-01

    Participants earned points by pressing a computer space bar (Experiment 1) or forming rectangles on the screen with the mouse (Experiment 2) under differential-reinforcement-of-low-rate schedules, followed by extinction. Variability in interresponse time (the contingent dimension) increased during extinction, as for Morgan and Lee (1996);…

  13. Current extinction rates of reptiles and amphibians.

    Science.gov (United States)

    Alroy, John

    2015-10-20

    There is broad concern that a mass extinction of amphibians and reptiles is now underway. Here I apply an extremely conservative Bayesian method to estimate the number of recent amphibian and squamate extinctions in nine important tropical and subtropical regions. The data stem from a combination of museum collection databases and published site surveys. The method computes an extinction probability for each species by considering its sighting frequency and last sighting date. It infers hardly any extinction when collection dates are randomized and it provides underestimates when artificial extinction events are imposed. The method also appears to be insensitive to trends in sampling; therefore, the counts it provides are absolute minimums. Extinctions or severe population crashes have accumulated steadily since the 1970s and 1980s, and at least 3.1% of frog species have already disappeared. Based on these data and this conservative method, the best estimate of the global grand total is roughly 200 extinctions. Consistent with previous results, frog losses are heavy in Latin America, which has been greatly affected by the pathogenic chytrid fungus Batrachochytrium dendrobatidis. Extinction rates are now four orders-of-magnitude higher than background, and at least another 6.9% of all frog species may be lost within the next century, even if there is no acceleration in the growth of environmental threats.

  14. Mass extinction in poorly known taxa.

    Science.gov (United States)

    Régnier, Claire; Achaz, Guillaume; Lambert, Amaury; Cowie, Robert H; Bouchet, Philippe; Fontaine, Benoît

    2015-06-23

    Since the 1980s, many have suggested we are in the midst of a massive extinction crisis, yet only 799 (0.04%) of the 1.9 million known recent species are recorded as extinct, questioning the reality of the crisis. This low figure is due to the fact that the status of very few invertebrates, which represent the bulk of biodiversity, have been evaluated. Here we show, based on extrapolation from a random sample of land snail species via two independent approaches, that we may already have lost 7% (130,000 extinctions) of the species on Earth. However, this loss is masked by the emphasis on terrestrial vertebrates, the target of most conservation actions. Projections of species extinction rates are controversial because invertebrates are essentially excluded from these scenarios. Invertebrates can and must be assessed if we are to obtain a more realistic picture of the sixth extinction crisis.

  15. Synchronous extinction of North America's Pleistocene mammals

    Science.gov (United States)

    Faith, J. Tyler; Surovell, Todd A.

    2009-12-01

    The late Pleistocene witnessed the extinction of 35 genera of North American mammals. The last appearance dates of 16 of these genera securely fall between 12,000 and 10,000 radiocarbon years ago (≈13,800-11,400 calendar years B.P.), although whether the absence of fossil occurrences for the remaining 19 genera from this time interval is the result of sampling error or temporally staggered extinctions is unclear. Analysis of the chronology of extinctions suggests that sampling error can explain the absence of terminal Pleistocene last appearance dates for the remaining 19 genera. The extinction chronology of North American Pleistocene mammals therefore can be characterized as a synchronous event that took place 12,000-10,000 radiocarbon years B.P. Results favor an extinction mechanism that is capable of wiping out up to 35 genera across a continent in a geologic instant.

  16. Extinction in neutrally stable stochastic Lotka-Volterra models.

    Science.gov (United States)

    Dobrinevski, Alexander; Frey, Erwin

    2012-05-01

    Populations of competing biological species exhibit a fascinating interplay between the nonlinear dynamics of evolutionary selection forces and random fluctuations arising from the stochastic nature of the interactions. The processes leading to extinction of species, whose understanding is a key component in the study of evolution and biodiversity, are influenced by both of these factors. Here, we investigate a class of stochastic population dynamics models based on generalized Lotka-Volterra systems. In the case of neutral stability of the underlying deterministic model, the impact of intrinsic noise on the survival of species is dramatic: It destroys coexistence of interacting species on a time scale proportional to the population size. We introduce a new method based on stochastic averaging which allows one to understand this extinction process quantitatively by reduction to a lower-dimensional effective dynamics. This is performed analytically for two highly symmetrical models and can be generalized numerically to more complex situations. The extinction probability distributions and other quantities of interest we obtain show excellent agreement with simulations.

  17. The Cometary Hypothesis of the K/t Mass Extinctions

    Science.gov (United States)

    Wickramasinghe, N. C.; Wallis, M. K.

    1994-09-01

    The correlation of the extended period of biological mass extinctions around the KIT boundary with extraterrestrial amino acids in the sediment record constitutes strong evidence of a cometary cause. While the fact that the dinosaurs' extinction coincided with the Chixculub cratering event and iridium-rich sediments suggests a chance asteroidal or cometary impact, the enhanced input of extraterrestrial matter over 1 0 yr supports the hypothesis of a Jupiter-associated giant comet, fragmented into a multitude of pieces, as demonstrated by comet Shoemaker-Levy 9, and perturbed into Earth-crossing orbits. Copious amounts of dust were released also, enhancing the dust abundance in the Solar system by several orders of magnitude. By studying the radiative properties of the submicron dust fraction of organic composition, we find that it is retained in the inner Solar system and is available for planetary accretion, uniike the IR-containing metallic and mineral dust. The shroud of dust accreted in the Earth's upper atmosphere can be sufficient to impose climatic stresses and cause extinctions of species over a protracted period of 10 yr. Dynamical arguments imply that the impacting comet most probably came directly from Jupiter's family. Details of the iridium record are compatible with re-accretion of some of the material ejected into space from the Chixculub impact. Key words: gravitation - comets: general - Earth - interplanetary medium - planets and satellites: individual: Jupiter - Solar system: general.

  18. Extinction risk and diversification are linked in a plant biodiversity hotspot.

    Directory of Open Access Journals (Sweden)

    T Jonathan Davies

    2011-05-01

    Full Text Available It is widely recognized that we are entering an extinction event on a scale approaching the mass extinctions seen in the fossil record. Present-day rates of extinction are estimated to be several orders of magnitude greater than background rates and are projected to increase further if current trends continue. In vertebrates, species traits, such as body size, fecundity, and geographic range, are important predictors of vulnerability. Although plants are the basis for life on Earth, our knowledge of plant extinctions and vulnerabilities is lagging. Here, we disentangle the underlying drivers of extinction risk in plants, focusing on the Cape of South Africa, a global biodiversity hotspot. By comparing Red List data for the British and South African floras, we demonstrate that the taxonomic distribution of extinction risk differs significantly between regions, inconsistent with a simple, trait-based model of extinction. Using a comprehensive phylogenetic tree for the Cape, we reveal a phylogenetic signal in the distribution of plant extinction risks but show that the most threatened species cluster within short branches at the tips of the phylogeny--opposite to trends in mammals. From analyzing the distribution of threatened species across 11 exemplar clades, we suggest that mode of speciation best explains the unusual phylogenetic structure of extinction risks in plants of the Cape. Our results demonstrate that explanations for elevated extinction risk in plants of the Cape flora differ dramatically from those recognized for vertebrates. In the Cape, extinction risk is higher for young and fast-evolving plant lineages and cannot be explained by correlations with simple biological traits. Critically, we find that the most vulnerable plant species are nonetheless marching towards extinction at a more rapid pace but, surprisingly, independently from anthropogenic effects. Our results have important implications for conservation priorities and cast

  19. Extinction Risk of Phytoplankton Species to Potential Killing Mechanisms at the Cretaceous-Paleogene Boundary

    Science.gov (United States)

    Bralower, T. J.; Schueth, J.; Jiang, S.

    2013-05-01

    certainly occurred over durations far shorter than can be resolved in the stratigraphic record, determining their ultimate causes is challenging and far more speculative. In our presentation, we discuss the extinction risk of latest Maastrichtian nannoplankton species by comparing our understanding of their ecology with the biological effects of each potential killing mechanism. Our results show that no one mechanism can explain the extinction of nannoplankton as a group, while also explaining the selection of survivors. We show how acidification and eutrophication amplified extinction risk of species to cessation of photosynthesis caused by darkness.

  20. Late Quaternary Megafaunal Extinctions in Northern Eurasia: Latest Results

    Science.gov (United States)

    Stuart, Anthony

    2010-05-01

    Anthony J. Stuart1 & Adrian M. Lister2 1 Biological and Biomedical Sciences, Durham University, South Road, Durham DH1 3LE, UK. Email: tony.s@megafauna.org.uk 2 Department of Palaeontology, The Natural History Museum, Cromwell Road, London SW7 5BD, UK. Email: a.lister@nhm.ac.uk. The global extinction of many spectacular species of megafauna (large terrestrial mammals, together with a few large reptiles and birds) within the last c. 50,000 years (Late Quaternary) has been attributed on the one hand to ‘overkill' by human hunters and on the other to environmental change. However, in spite of more than half a century of active interest and research the issue remains unresolved, largely because there are insufficient dated records of megafaunal species for most parts of the world. Northern Eurasia is an especially fruitful region in which to research megafaunal extinctions as it has a wealth of megafaunal material and crucially most extinctions occurred well within the range of radiocarbon dating. Our approach, in a series of projects over the last decade funded by the UK Natural Environment Research Council (NERC), involves amassing radiocarbon dates made directly on megafaunal material from across the entire region: a) by submitting a substantial number of samples (so far c. 500 dates) for AMS dating at Oxford (ORAU); b) obtaining AMS dates from colleagues working on aDNA projects; and c) carefully screening (‘auditing') dates from the literature. The dates (calibrated using OxCal) are plotted as time-sliced maps and as chronological/geographical charts. In our previous work we targeted a range of extinct species from Northern Eurasia: woolly mammoth, woolly rhinoceros, giant deer, cave bear (in collaboration with Martina Pacher), cave lion, and spotted hyaena (which survives today only in Sub-Saharan Africa). By this means we have established a reliable chronology for these extinctions which we are able to compare with the climatic, vegetational and

  1. Biological legacies buffer local species extinction after logging

    Science.gov (United States)

    Rudolphi, Jörgen; Jönsson, Mari T; Gustafsson, Lena

    2014-01-01

    Clearcutting has been identified as a main threat to forest biodiversity. In the last few decades, alternatives to clearcutting have gained much interest. Living and dead trees are often retained after harvest to serve as structural legacies to mitigate negative effects of forestry. However, this practice is widely employed without information from systematic before–after control-impact studies to assess the processes involved in species responses after clearcutting with retention. We performed a large-scale survey of the occurrence of logging-sensitive and red-listed bryophytes and lichens before and after clearcutting with the retention approach. A methodology was adopted that, for the first time in studies on retention approaches, enabled monitoring of location-specific substrates. We used uncut stands as controls to assess the variables affecting the survival of species after a major disturbance. In total, 12 bryophyte species and 27 lichen species were analysed. All were classified as sensitive to logging, and most species are also currently red-listed. We found that living and dead trees retained after final harvest acted as refugia in which logging-sensitive species were able to survive for 3 to 7 years after logging. Depending on type of retention and organism group, between 35% and 92% of the species occurrences persisted on retained structures. Most species observed outside retention trees or patches disappeared. Larger pre-harvest population sizes of bryophytes on dead wood increased the survival probability of the species and hence buffered the negative effects of logging. Synthesis and applications. Careful spatial planning of retention structures is required to fully embrace the habitats of logging-sensitive species. Bryophytes and lichens persisted to a higher degree in retention patches compared to solitary trees or in the clearcut area. Retaining groups of trees in logged areas will help to sustain populations of species over the clearcut phase. When possible, old logs should be moved into retention patches to provide a more beneficial environment for dead wood-dependent species. Our study also highlights the need for more before–after control-impact studies of retention forestry to explore factors influencing the survival of species after logging. PMID:25653456

  2. The cost of being valuable: predictors of extinction risk in marine invertebrates exploited as luxury seafood.

    Science.gov (United States)

    Purcell, Steven W; Polidoro, Beth A; Hamel, Jean-François; Gamboa, Ruth U; Mercier, Annie

    2014-04-22

    Extinction risk has been linked to biological and anthropogenic variables. Prediction of extinction risk in valuable fauna may not follow mainstream drivers when species are exploited for international markets. We use results from an International Union for Conservation of Nature Red List assessment of extinction risk in all 377 known species of sea cucumber within the order Aspidochirotida, many of which are exploited worldwide as luxury seafood for Asian markets. Extinction risk was primarily driven by high market value, compounded by accessibility and familiarity (well known) in the marketplace. Extinction risk in marine animals often relates closely to body size and small geographical range but our study shows a clear exception. Conservation must not lose sight of common species, especially those of high value. Greater human population density and poorer economies in the geographical ranges of endangered species illustrate that anthropogenic variables can also predict extinction risks in marine animals. Local-level regulatory measures must prevent opportunistic exploitation of high-value species. Trade agreements, for example CITES, may aid conservation but will depend on international technical support to low-income tropical countries. The high proportion of data deficient species also stresses a need for research on the ecology and population demographics of unglamorous invertebrates.

  3. Historical drivers of extinction risk: using past evidence to direct future monitoring.

    Science.gov (United States)

    Di Marco, Moreno; Collen, Ben; Rondinini, Carlo; Mace, Georgina M

    2015-08-22

    Global commitments to halt biodiversity decline mean that it is essential to monitor species' extinction risk. However, the work required to assess extinction risk is intensive. We demonstrate an alternative approach to monitoring extinction risk, based on the response of species to external conditions. Using retrospective International Union for Conservation of Nature Red List assessments, we classify transitions in the extinction risk of 497 mammalian carnivores and ungulates between 1975 and 2013. Species that moved to lower Red List categories, or remained Least Concern, were classified as 'lower risk'; species that stayed in a threatened category, or moved to a higher category of risk, were classified as 'higher risk'. Twenty-four predictor variables were used to predict transitions, including intrinsic traits (species biology) and external conditions (human pressure, distribution state and conservation interventions). The model correctly classified up to 90% of all transitions and revealed complex interactions between variables, such as protected areas (PAs) versus human impact. The most important predictors were: past extinction risk, PA extent, geographical range size, body size, taxonomic family and human impact. Our results suggest that monitoring a targeted set of metrics would efficiently identify species facing a higher risk, and could guide the allocation of resources between monitoring species' extinction risk and monitoring external conditions.

  4. Relict or colonizer? Extinction and range expansion of penguins in southern New Zealand.

    Science.gov (United States)

    Boessenkool, Sanne; Austin, Jeremy J; Worthy, Trevor H; Scofield, Paul; Cooper, Alan; Seddon, Philip J; Waters, Jonathan M

    2009-03-07

    Recent human expansion into the Pacific initiated a dramatic avian extinction crisis, and surviving taxa are typically interpreted as declining remnants of previously abundant populations. As a case in point, New Zealand's endangered yellow-eyed penguin (Megadyptes antipodes) is widely considered to have been more abundant and widespread in the past. By contrast, our genetic and morphological analyses of prehistoric, historic and modern penguin samples reveal that this species expanded its range to the New Zealand mainland only in the last few hundred years. This range expansion was apparently facilitated by the extinction of M. antipodes' previously unrecognized sister species following Polynesian settlement in New Zealand. Based on combined genetic and morphological data, we describe this new penguin species, the first known to have suffered human-mediated extinction. The range expansion of M. antipodes so soon after the extinction of its sister species supports a historic paradigmatic shift in New Zealand Polynesian culture. Additionally, such a dynamic biological response to human predation reveals a surprising and less recognized potential for species to have benefited from the extinction of their ecologically similar sister taxa and highlights the complexity of large-scale extinction events.

  5. Immediate extinction causes a less durable loss of performance than delayed extinction following either fear or appetitive conditioning

    OpenAIRE

    Woods, Amanda M.; Bouton, Mark E.

    2008-01-01

    Five experiments with rat subjects compared the effects of immediate and delayed extinction on the durability of extinction learning. Three experiments examined extinction of fear conditioning (using the conditioned emotional response method), and two experiments examined extinction of appetitive conditioning (using the food-cup entry method). In all experiments, conditioning and extinction were accomplished in single sessions, and retention testing took place 24 h after extinction. In both f...

  6. Resistance to extinction and behavioral momentum.

    Science.gov (United States)

    Nevin, John A

    2012-05-01

    In the metaphor of behavioral momentum, reinforcement is assumed to strengthen discriminated operant behavior in the sense of increasing its resistance to disruption, and extinction is viewed as disruption by contingency termination and reinforcer omission. In multiple schedules of intermittent reinforcement, resistance to extinction is an increasing function of reinforcer rate, consistent with a model based on the momentum metaphor. The partial-reinforcement extinction effect, which opposes the effects of reinforcer rate, can be explained by the large disruptive effect of terminating continuous reinforcement despite its strengthening effect during training. Inclusion of a term for the context of reinforcement during training allows the model to account for a wide range of multiple-schedule extinction data and makes contact with other formulations. The relation between resistance to extinction and reinforcer rate on single schedules of intermittent reinforcement is exactly opposite to that for multiple schedules over the same range of reinforcer rates; however, the momentum model can give an account of resistance to extinction in single as well as multiple schedules. An alternative analysis based on the number of reinforcers omitted to an extinction criterion supports the conclusion that response strength is an increasing function of reinforcer rate during training.

  7. Extinction as discrimination: the molar view.

    Science.gov (United States)

    Baum, William M

    2012-05-01

    The traditional molecular view of behavior explains extinction as the dissipation or inhibition of strength, formerly built up by contiguous reinforcement. In obstinate opposition to this explanation was the partial-reinforcement extinction effect: a partially reinforced response extinguishes more slowly than a continuously reinforced response. It suggests instead that extinction is discrimination. Four pigeons were exposed to daily sessions in which a variable period of food delivery, produced by pecking on a variable-interval schedule, was followed by extinction. The rate of food delivery was varied over a wide range across conditions. Varying the amount of food per delivery inversely with rate of delivery kept response rate from varying excessively. The results confirmed and extended the partial-reinforcement effect; persistence of pecking and time to extinction were inversely related to rate of obtaining food. The results support the molar view of extinction, not as loss of strength of a particular discrete response, but as a transition from one allocation of time among activities to another. Although molecular theories dismiss discrimination due to repeated training and extinction as an impurity or complication, repeated cycles of availability and privation are probably typical of the environment in which most vertebrate species evolved.

  8. Retention of perceptual generalization of fear extinction.

    Science.gov (United States)

    Pappens, Meike; Schroijen, Mathias; Van den Bergh, Omer; Van Diest, Ilse

    2015-12-01

    Fear reduction obtained during a fear extinction procedure can generalize from the extinction stimulus to other perceptually similar stimuli. Perceptual generalization of fear extinction typically follows a perceptual gradient, with increasing levels of fear reduction the more a stimulus resembles the extinction stimulus. The current study aimed to investigate whether perceptual generalization of fear extinction can be observed also after a retention interval of 24h. Fear was acquired to three geometrical figures of different sizes (CS(+), CS1(+) and CS2(+)) by consistently pairing them with a short-lasting suffocation experience (US). Three other geometrical figures that were never followed by the US served as control stimuli (CS(-), CS1(-), CS2(-)). Next, only the CS(+) was extinguished by presenting it in the absence of the US. One day later, fear responses to all stimuli were assessed without any US-presentation. Outcome measures included startle blink EMG, skin conductance, US expectancy, respiratory rate and tidal volume. On day 2 spontaneous recovery of fear was observed in US expectancy and tidal volume, but not in the other outcomes. Evidence for the retention of fear extinction generalization was present in US expectancy and skin conductance, but a perceptual gradient in the retention of generalized fear extinction could not be observed.

  9. Compound stimulus presentation and the norepinephrine reuptake inhibitor atomoxetine enhance long-term extinction of cocaine-seeking behavior.

    Science.gov (United States)

    Janak, Patricia H; Bowers, M Scott; Corbit, Laura H

    2012-03-01

    Drug abstinence is frequently compromised when addicted individuals are re-exposed to environmental stimuli previously associated with drug use. Research with human addicts and in animal models has demonstrated that extinction learning (non-reinforced cue-exposure) can reduce the capacity of such stimuli to induce relapse, yet extinction therapies have limited long-term success under real-world conditions (Bouton, 2002; O'Brien, 2008). We hypothesized that enhancing extinction would reduce the later ability of drug-predictive cues to precipitate drug-seeking behavior. We, therefore, tested whether compound stimulus presentation and pharmacological treatments that augment noradrenergic activity (atomoxetine; norepinephrine reuptake inhibitor) during extinction training would facilitate the extinction of drug-seeking behaviors, thus reducing relapse. Rats were trained that the presentation of a discrete cue signaled that a lever press response would result in cocaine reinforcement. Rats were subsequently extinguished and spontaneous recovery of drug-seeking behavior following presentation of previously drug-predictive cues was tested 4 weeks later. We find that compound stimulus presentations or pharmacologically increasing noradrenergic activity during extinction training results in less future recovery of responding, whereas propranolol treatment reduced the benefit seen with compound stimulus presentation. These data may have important implications for understanding the biological basis of extinction learning, as well as for improving the outcome of extinction-based therapies.

  10. Incorporating climate and ocean change into extinction risk assessments for 82 coral species.

    Science.gov (United States)

    Brainard, Russell E; Weijerman, Mariska; Eakin, C Mark; McElhany, Paul; Miller, Margaret W; Patterson, Matt; Piniak, Gregory A; Dunlap, Matthew J; Birkeland, Charles

    2013-12-01

    Many marine invertebrate species facing potential extinction have uncertain taxonomies and poorly known demographic and ecological traits. Uncertainties are compounded when potential extinction drivers are climate and ocean changes whose effects on even widespread and abundant species are only partially understood. The U.S. Endangered Species Act mandates conservation management decisions founded on the extinction risk to species based on the best available science at the time of consideration-requiring prompt action rather than awaiting better information. We developed an expert-opinion threat-based approach that entails a structured voting system to assess extinction risk from climate and ocean changes and other threats to 82 coral species for which population status and threat response information was limited. Such methods are urgently needed because constrained budgets and manpower will continue to hinder the availability of desired data for many potentially vulnerable marine species. Significant species-specific information gaps and uncertainties precluded quantitative assessments of habitat loss or population declines and necessitated increased reliance on demographic characteristics and threat vulnerabilities at genus or family levels. Adapting some methods (e.g., a structured voting system) used during other assessments and developing some new approaches (e.g., integrated assessment of threats and demographic characteristics), we rated the importance of threats contributing to coral extinction risk and assessed those threats against population status and trend information to evaluate each species' extinction risk over the 21st century. This qualitative assessment resulted in a ranking with an uncertainty range for each species according to their estimated likelihood of extinction. We offer guidance on approaches for future biological extinction risk assessments, especially in cases of data-limited species likely to be affected by global-scale threats

  11. A model for evolution and extinction

    CERN Document Server

    Roberts, B W; Roberts, Bruce W

    1995-01-01

    We present a model for evolution and extinction in large ecosystems. The model incorporates the effects of interactions between species and the influences of abiotic environmental factors. We study the properties of the model by approximate analytic solution and also by numerical simulation, and use it to make predictions about the distribution of extinctions and species lifetimes that we would expect to see in real ecosystems. It should be possible to test these predictions against the fossil record. The model indicates that a possible mechanism for mass extinction is the coincidence of a large coevolutionary avalanche in the ecosystem with a severe environmental disturbance.

  12. Volcanogenic Dark Matter and Mass Extinctions

    CERN Document Server

    Abbas, S; Abbas, Samar; Abbas, Afsar

    1996-01-01

    The passage of the Earth through dense clumps of dark matter, the presence of which are predicted by certain cosmologies, would produce large quantities of heat in the interior of this planet through the capture and subsequent annihilation of dark matter particles. This heat can cause large-scale volcanism which could in turn have caused the extinction of the dinosaurs and other mass extinctions. The periodicity of such volcanic outbursts agrees with the frequency of palaeontological mass extinctions as well as the observed periodicity in the occurrence of the largest flood basalt provinces on the globe.

  13. Interstellar extinction by fractal polycrystalline graphite clusters?

    CERN Document Server

    Andersen, A C; Pustovit, V N; Niklasson, G A

    2001-01-01

    Certain dust particles in space are expected to appear as clusters of individual grains. The morphology of these clusters could be fractal or compact. To determine how these structural features would affect the interpretation of the observed interstellar extinction peak at $\\sim 4.6~\\mu$m, we have calculated the extinction by compact and fractal polycrystalline graphite clusters consisting of touching identical spheres. We compare three general methods for computing the extinction of the clusters, namely, a rigorous solution and two different discrete-dipole approximation methods.

  14. A mathematical model for Neanderthal extinction

    CERN Document Server

    Flores, J C

    1997-01-01

    A simple mathematical homogeneous model of competition is used to describe Neanderthal extinction in Europe. It considers two interacting species, Neanderthals and Early Modern Men, in the same ecological niche. Using paleontological data we claim that the parameter of similarity, between both species, fluctuates between 0.992 and 0.997. An extension of the model including migration (diffusion) is also discussed nevertheless, extinction of Neanderthal seems unavoidable. Numerical analysis of travelling wave solution (fronts) comfirms the extinction. The wave-front-velocity is estimated from linear analysis and numerical simulations confirm this estimation. We conjecture a mathematical formulation for the principle of exclusion between competitive interacting species (Gause).

  15. System Fitness and the Extinction Patterns of Firms under Pure Economic Competition

    OpenAIRE

    Ormerod, P; Johns, H

    2001-01-01

    The relationships which characterise the outcomes of the interactions between firms in the economy appear to follow power law behaviour. In particular, there is evidence that the empirical power laws which relate the size of an extinction to its frequency are similar for both biological species and firms in the economy .Biological species interact with each other in ways which either increase or decrease the fitness levels of individual species. In the same way, firms in the economy carry out...

  16. Biogeographic and bathymetric determinants of brachiopod extinction and survival during the Late Ordovician mass extinction

    DEFF Research Database (Denmark)

    Finnegan, Seth; Mac Ørum Rasmussen, Christian; Harper, David A. T.

    2016-01-01

    The Late Ordovician mass extinction (LOME) coincided with dramatic climate changes, but there are numerous ways in which these changes could have driven marine extinctions. We use a palaeobiogeographic database of rhynchonelliform brachiopods to examine the selectivity of Late Ordovician......–Early Silurian genus extinctions and evaluate which extinction drivers are best supported by the data. The first (latest Katian) pulse of the LOME preferentially affected genera restricted to deeper waters or to relatively narrow (less than 35°) palaeolatitudinal ranges. This pattern is only observed...... in the latest Katian, suggesting that it reflects drivers unique to this interval. Extinction of exclusively deeper-water genera implies that changes in water mass properties such as dissolved oxygen content played an important role. Extinction of genera with narrow latitudinal ranges suggests that interactions...

  17. Late Pleistocene Megafaunal Extinction Consistent With YDB Impact Hypothesis at Younger Dryas Onset

    Science.gov (United States)

    Kennett, J. P.; Kennett, D. J.

    2008-12-01

    At least 35 mammal and 19 bird genera became extinct across North America near the end of the Pleistocene. Modern increases in stratigraphic and dating resolution suggest that this extinction occurred relatively rapidly near 12.9 ka (11 radiocarbon kyrs). Within the context of a long-standing debate about its cause, Firestone et al., (2007) proposed that this extinction resulted from an extraterrestrial (ET) impact over North America at 12.9 ka. This hypothesis predicts that the extinction of most of these animals should have occurred abruptly at 12.9 ka. To test this hypothesis, we have critically examined radiocarbon ages and the extinction stratigraphy of these taxa. From a large data pool, we selected only radiocarbon dates with low error margins with a preference for directly dated biological materials (e.g., bone, dung, etc.) and modern chemical purification techniques. A relatively small number of acceptable dates indicate that at least 16 animal genera and several other species became extinct close to 12.9 ka. These taxa include the most common animals of the late Pleistocene such as horses, camels, and mammoths. Also, the remains of extinct taxa are reportedly found up to, but not above, the base of a widely distributed carbon-rich layer called the black mat. This stratum forms an abrupt, major biostratigraphic boundary at the Younger Dryas onset (12.9 ka), which also contains multiple ET markers comprising the impact layer (the YDB). Surviving animal populations were abruptly reduced at the YDB (e.g., Bison), with major range restrictions and apparent evolutionary bottlenecks. The abruptness of this major extinction is inconsistent with the hypotheses of human overkill and climatic change. We argue that extinction ages older than 12.9 ka for many less common species result from the Signor-Lipps effect, but the impact hypothesis predicts that as new dates are acquired, they will approach ever closer to 12.9 ka. The megafaunal extinction is strongly

  18. Impending extinction crisis of the world's primates: Why primates matter.

    Science.gov (United States)

    Estrada, Alejandro; Garber, Paul A; Rylands, Anthony B; Roos, Christian; Fernandez-Duque, Eduardo; Di Fiore, Anthony; Nekaris, K Anne-Isola; Nijman, Vincent; Heymann, Eckhard W; Lambert, Joanna E; Rovero, Francesco; Barelli, Claudia; Setchell, Joanna M; Gillespie, Thomas R; Mittermeier, Russell A; Arregoitia, Luis Verde; de Guinea, Miguel; Gouveia, Sidney; Dobrovolski, Ricardo; Shanee, Sam; Shanee, Noga; Boyle, Sarah A; Fuentes, Agustin; MacKinnon, Katherine C; Amato, Katherine R; Meyer, Andreas L S; Wich, Serge; Sussman, Robert W; Pan, Ruliang; Kone, Inza; Li, Baoguo

    2017-01-01

    Nonhuman primates, our closest biological relatives, play important roles in the livelihoods, cultures, and religions of many societies and offer unique insights into human evolution, biology, behavior, and the threat of emerging diseases. They are an essential component of tropical biodiversity, contributing to forest regeneration and ecosystem health. Current information shows the existence of 504 species in 79 genera distributed in the Neotropics, mainland Africa, Madagascar, and Asia. Alarmingly, ~60% of primate species are now threatened with extinction and ~75% have declining populations. This situation is the result of escalating anthropogenic pressures on primates and their habitats-mainly global and local market demands, leading to extensive habitat loss through the expansion of industrial agriculture, large-scale cattle ranching, logging, oil and gas drilling, mining, dam building, and the construction of new road networks in primate range regions. Other important drivers are increased bushmeat hunting and the illegal trade of primates as pets and primate body parts, along with emerging threats, such as climate change and anthroponotic diseases. Often, these pressures act in synergy, exacerbating primate population declines. Given that primate range regions overlap extensively with a large, and rapidly growing, human population characterized by high levels of poverty, global attention is needed immediately to reverse the looming risk of primate extinctions and to attend to local human needs in sustainable ways. Raising global scientific and public awareness of the plight of the world's primates and the costs of their loss to ecosystem health and human society is imperative.

  19. Three Color Particle Optical Extinction Monitor Project

    Data.gov (United States)

    National Aeronautics and Space Administration — We propose to design, build and test a multi-color (red, green, blue) particle optical extinction monitor suitable for use in either land or airborne applications....

  20. Calibrating the end-Permian mass extinction.

    Science.gov (United States)

    Shen, Shu-zhong; Crowley, James L; Wang, Yue; Bowring, Samuel A; Erwin, Douglas H; Sadler, Peter M; Cao, Chang-qun; Rothman, Daniel H; Henderson, Charles M; Ramezani, Jahandar; Zhang, Hua; Shen, Yanan; Wang, Xiang-dong; Wang, Wei; Mu, Lin; Li, Wen-zhong; Tang, Yue-gang; Liu, Xiao-lei; Liu, Lu-jun; Zeng, Yong; Jiang, Yao-fa; Jin, Yu-gan

    2011-12-09

    The end-Permian mass extinction was the most severe biodiversity crisis in Earth history. To better constrain the timing, and ultimately the causes of this event, we collected a suite of geochronologic, isotopic, and biostratigraphic data on several well-preserved sedimentary sections in South China. High-precision U-Pb dating reveals that the extinction peak occurred just before 252.28 ± 0.08 million years ago, after a decline of 2 per mil (‰) in δ(13)C over 90,000 years, and coincided with a δ(13)C excursion of -5‰ that is estimated to have lasted ≤20,000 years. The extinction interval was less than 200,000 years and synchronous in marine and terrestrial realms; associated charcoal-rich and soot-bearing layers indicate widespread wildfires on land. A massive release of thermogenic carbon dioxide and/or methane may have caused the catastrophic extinction.

  1. Possible involvement of serotonin in extinction.

    Science.gov (United States)

    Beninger, R J; Phillips, A G

    1979-01-01

    In Experiment 1, rats were trained to leverpress for continuous reinforcement with food; half were then intubated with the serotonin synthesis inhibitor parachlorophenylalanine (PCPA: 400 mg/kg) and half with water. In extinction the PCPA-treated rats responded at a higher rate. In Experiment 2, rats were trained on a random interval schedule and then assigned to two groups, treated as in Experiment 1, and tested in extinction. There was no significant difference in the resistance to extinction of the two groups. In Experiment 3, the responding of rats trained in a punished stepdown response paradigm and then given an intragastric injection of PCPA took longer to recover than the responding of water-injected controls. These observations suggest that serotonergic neurons might play a role in extinction processes.

  2. Extinction in the Lotka-Volterra model.

    Science.gov (United States)

    Parker, Matthew; Kamenev, Alex

    2009-08-01

    Birth-death processes often exhibit an oscillatory behavior. We investigate a particular case where the oscillation cycles are marginally stable on the mean-field level. An iconic example of such a system is the Lotka-Volterra model of predator-prey interaction. Fluctuation effects due to discreteness of the populations destroy the mean-field stability and eventually drive the system toward extinction of one or both species. We show that the corresponding extinction time scales as a certain power-law of the population sizes. This behavior should be contrasted with the extinction of models stable in the mean-field approximation. In the latter case the extinction time scales exponentially with size.

  3. Periodicity of extinctions in the geologic past.

    Science.gov (United States)

    Raup, D M; Sepkoski, J J

    1984-02-01

    The temporal distribution of the major extinctions over the past 250 million years has been investigated statistically using various forms of time series analysis. The analyzed record is based on variation in extinction intensity for fossil families of marine vertebrates, invertebrates, and protozoans and contains 12 extinction events. The 12 events show a statistically significant periodicity (P less than 0.01) with a mean interval between events of 26 million years. Two of the events coincide with extinctions that have been previously linked to meteorite impacts (terminal Cretaceous and Late Eocene). Although the causes of the periodicity are unknown, it is possible that they are related to extraterrestrial forces (solar, solar system, or galactic).

  4. Epidemic extinction and control in heterogeneous networks

    CERN Document Server

    Hindes, Jason

    2016-01-01

    We consider epidemic extinction in finite networks with broad variation in local connectivity. Generalizing the theory of large fluctuations to random networks with a given degree distribution, we are able to predict the most probable, or optimal, paths to extinction in various configurations, including truncated power-laws. We find that paths for heterogeneous networks follow a limiting form in which infection first decreases in low-degree nodes, which triggers a rapid extinction in high- degree nodes, and finishes with a residual low-degree extinction. The usefulness of the approach is further demonstrated through optimal control strategies that leverage finite-size fluctuations. Interestingly, we find that the optimal control is a mix of treating both high and low-degree nodes based on large-fluctuation theoretical predictions.

  5. Protostars at Low Extinction in Orion A

    CERN Document Server

    Lewis, John Arban

    2016-01-01

    In the list of young stellar objects compiled by Megeath et al. (2012) for the Orion A molecular cloud, only 44 out of 1208 sources found projected onto low extinction (Ak<0.8 mag) gas are identified as protostars. These objects are puzzling because protostars are not typically expected to be associated with extended low extinction material. Here, we use high resolution extinction maps generated from Herschel data, optical/infrared and Spitzer Space Telescope photometry and spectroscopy of the low extinction protostellar candidate sources to determine if they are likely true protostellar sources or contaminants. Out of 44 candidate objects, we determine that 10 sources are likely protostars, with the rest being more evolved young stellar objects (18), galaxies (4), false detections of nebulosity and cloud edges (9), or real sources for which more data are required to ascertain their nature (3). We find none of the confirmed protostars to be associated with recognizable dense cores and we briefly discuss po...

  6. Biomarker Records Associated with Mass Extinction Events

    Science.gov (United States)

    Whiteside, Jessica H.; Grice, Kliti

    2016-06-01

    The history of life on Earth is punctuated by a series of mass extinction episodes that vary widely in their magnitude, duration, and cause. Biomarkers are a powerful tool for the reconstruction of historical environmental conditions and can therefore provide insights into the cause and responses to ancient extinction events. In examining the five largest mass extinctions in the geological record, investigators have used biomarkers to elucidate key processes such as eutrophy, euxinia, ocean acidification, changes in hydrological balance, and changes in atmospheric CO2. By using these molecular fossils to understand how Earth and its ecosystems have responded to unusual environmental activity during these extinctions, models can be made to predict how Earth will respond to future changes in its climate.

  7. Rethinking Trade-Driven Extinction Risk in Marine and Terrestrial Megafauna.

    Science.gov (United States)

    McClenachan, Loren; Cooper, Andrew B; Dulvy, Nicholas K

    2016-06-20

    Large animals hunted for the high value of their parts (e.g., elephant ivory and shark fins) are at risk of extinction due to both intensive international trade pressure and intrinsic biological sensitivity. However, the relative role of trade, particularly in non-perishable products, and biological factors in driving extinction risk is not well understood [1-4]. Here we identify a taxonomically diverse group of >100 marine and terrestrial megafauna targeted for international luxury markets; estimate their value across three points of sale; test relationships among extinction risk, high value, and body size; and quantify the effects of two mitigating factors: poaching fines and geographic range size. We find that body size is the principal driver of risk for lower value species, but that this biological pattern is eliminated above a value threshold, meaning that the most valuable species face a high extinction risk regardless of size. For example, once mean product values exceed US$12,557 kg(-1), body size no longer drives risk. Total value scales with size for marine animals more strongly than for terrestrial animals, incentivizing the hunting of large marine individuals and species. Poaching fines currently have little effect on extinction risk; fines would need to be increased 10- to 100-fold to be effective. Large geographic ranges reduce risk for terrestrial, but not marine, species, whose ranges are ten times greater. Our results underscore both the evolutionary and ecosystem consequences of targeting large marine animals and the need to geographically scale up and prioritize conservation of high-value marine species to avoid extinction.

  8. Extinction in the Galaxy from surface brightnesses of ESO-LV galaxies: testing 'standard' extinction maps

    OpenAIRE

    Choloniewski, Jacek; Valentijn, Edwin A.

    2003-01-01

    The relative extinction in the Galaxy computed with our new method (Choloniewski and Valentijn 2003, CV) is compared with three patterns: Schlegel, Finkbeiner and Davis (1998, SFD), Burstein and Heiles (1978, BH) and the cosecans law. It is shown that extinction of SFD is more reliable then that of BH since it stronger correlates with our new extinction. The smallest correlation coeffcient have been obtained for the cosecans law. Linear regression analysis show that SFD overestimate the extin...

  9. An Analysis of the Shapes of Ultraviolet Extinction Curves. IV. Extinction without Standards

    OpenAIRE

    Fitzpatrick, Edward L.; Massa, Derck

    2005-01-01

    We present a new method for deriving UV-through-IR extinction curves, based on the use of stellar atmosphere models to provide estimates of the intrinsic (i.e., unreddened) stellar spectral energy distributions (SEDs), rather than unreddened (or lightly reddened) standard stars. We show that this ``extinction-without-standards'' technique greatly increases the accuracy of the derived extinction curves and allows realistic estimations of the uncertainties. An additional benefit of the techniqu...

  10. Extinction in Lotka-Volterra model

    OpenAIRE

    Parker, Matthew; Kamenev, Alex

    2009-01-01

    Competitive birth-death processes often exhibit an oscillatory behavior. We investigate a particular case where the oscillation cycles are marginally stable on the mean-field level. An iconic example of such a system is the Lotka-Volterra model of predator-prey competition. Fluctuation effects due to discreteness of the populations destroy the mean-field stability and eventually drive the system toward extinction of one or both species. We show that the corresponding extinction time scales as...

  11. Demography and the extinction of European Neanderthals

    DEFF Research Database (Denmark)

    Sørensen, Bent

    2011-01-01

    Causes previously suggested for the sudden extinction of Neanderthals (Homo neanderthalensis) in Europe, starting around 35,000 years ago, comprise food shortage, climatic effects and violence from Modern Humans. The aim here is to formulate a demographic model with reconstructed fertility and de...... Human newcomers during the last part of the period. The conclusion is that other reasons for extinction than climate or starvation must be sought....

  12. Extinction as the loss of evolutionary history

    OpenAIRE

    Erwin, Douglas H.

    2008-01-01

    Current plant and animal diversity preserves at most 1–2% of the species that have existed over the past 600 million years. But understanding the evolutionary impact of these extinctions requires a variety of metrics. The traditional measurement is loss of taxa (species or a higher category) but in the absence of phylogenetic information it is difficult to distinguish the evolutionary depth of different patterns of extinction: the same species loss can encompass very different losses of evolu...

  13. Evolution of the extinction curves in galaxies

    CERN Document Server

    Asano, Ryosuke S; Hirashita, Hiroyuki; Nozawa, Takaya

    2014-01-01

    We investigate the evolution of extinction curves in galaxies based on our evolution model of grain size distribution. In this model, we considered various processes: dust formation by SNe II and AGB stars, dust destruction by SN shocks in the ISM, metal accretion onto the surface of grains (referred to as grain growth), shattering and coagulation. We find that the extinction curve is flat in the earliest stage of galaxy evolution. As the galaxy is enriched with dust, shattering becomes effective to produce a large abundance of small grains ($a \\la 0.01\\;\\mu$m). Then, grain growth becomes effective at small grain radii, forming a bump at $a \\sim 10^{-3}${--}$10^{-2}\\;\\mu$m on the grain size distribution. Consequently, the extinction curve at ultraviolet (UV) wavelengths becomes steep, and a bump at $1/\\lambda \\sim 4.5\\;\\mu{\\rm m}^{-1}\\;(\\lambda: \\mbox{wavelength})$ on the extinction curve becomes prominent. Once coagulation becomes effective, the extinction curves become flatter, but the UV extinction remains...

  14. How does climate change cause extinction?

    Science.gov (United States)

    Cahill, Abigail E; Aiello-Lammens, Matthew E; Fisher-Reid, M Caitlin; Hua, Xia; Karanewsky, Caitlin J; Ryu, Hae Yeong; Sbeglia, Gena C; Spagnolo, Fabrizio; Waldron, John B; Warsi, Omar; Wiens, John J

    2013-01-07

    Anthropogenic climate change is predicted to be a major cause of species extinctions in the next 100 years. But what will actually cause these extinctions? For example, will it be limited physiological tolerance to high temperatures, changing biotic interactions or other factors? Here, we systematically review the proximate causes of climate-change related extinctions and their empirical support. We find 136 case studies of climatic impacts that are potentially relevant to this topic. However, only seven identified proximate causes of demonstrated local extinctions due to anthropogenic climate change. Among these seven studies, the proximate causes vary widely. Surprisingly, none show a straightforward relationship between local extinction and limited tolerances to high temperature. Instead, many studies implicate species interactions as an important proximate cause, especially decreases in food availability. We find very similar patterns in studies showing decreases in abundance associated with climate change, and in those studies showing impacts of climatic oscillations. Collectively, these results highlight our disturbingly limited knowledge of this crucial issue but also support the idea that changing species interactions are an important cause of documented population declines and extinctions related to climate change. Finally, we briefly outline general research strategies for identifying these proximate causes in future studies.

  15. The extinction of the West African lion: whose responsibility?

    NARCIS (Netherlands)

    A. Nollkaemper

    2014-01-01

    A recently published study showed that the lion in West Africa is now critically endangered and faces extinction. From one angle, this would be just one of the large (though unknown) number of species that has previously faced extinction or has even become extinct. But the risk of extinction of some

  16. Compound Stimulus Extinction Reduces Spontaneous Recovery in Humans

    Science.gov (United States)

    Coelho, Cesar A. O.; Dunsmoor, Joseph E.; Phelps, Elizabeth A.

    2015-01-01

    Fear-related behaviors are prone to relapse following extinction. We tested in humans a compound extinction design ("deepened extinction") shown in animal studies to reduce post-extinction fear recovery. Adult subjects underwent fear conditioning to a visual and an auditory conditioned stimulus (CSA and CSB, respectively) separately…

  17. Large perturbations of the carbon cycle during recovery from the end-permian extinction.

    Science.gov (United States)

    Payne, Jonathan L; Lehrmann, Daniel J; Wei, Jiayong; Orchard, Michael J; Schrag, Daniel P; Knoll, Andrew H

    2004-07-23

    High-resolution carbon isotope measurements of multiple stratigraphic sections in south China demonstrate that the pronounced carbon isotopic excursion at the Permian-Triassic boundary was not an isolated event but the first in a series of large fluctuations that continued throughout the Early Triassic before ending abruptly early in the Middle Triassic. The unusual behavior of the carbon cycle coincides with the delayed recovery from end-Permian extinction recorded by fossils, suggesting a direct relationship between Earth system function and biological rediversification in the aftermath of Earth's most devastating mass extinction.

  18. Extinction rates in North American freshwater fishes, 1900-2010

    Science.gov (United States)

    Burkhead, Noel M.

    2012-01-01

    Widespread evidence shows that the modern rates of extinction in many plants and animals exceed background rates in the fossil record. In the present article, I investigate this issue with regard to North American freshwater fishes. From 1898 to 2006, 57 taxa became extinct, and three distinct populations were extirpated from the continent. Since 1989, the numbers of extinct North American fishes have increased by 25%. From the end of the nineteenth century to the present, modern extinctions varied by decade but significantly increased after 1950 (post-1950s mean = 7.5 extinct taxa per decade). In the twentieth century, freshwater fishes had the highest extinction rate worldwide among vertebrates. The modern extinction rate for North American freshwater fishes is conservatively estimated to be 877 times greater than the background extinction rate for freshwater fishes (one extinction every 3 million years). Reasonable estimates project that future increases in extinctions will range from 53 to 86 species by 2050.

  19. Immediate Extinction Causes a Less Durable Loss of Performance than Delayed Extinction following Either Fear or Appetitive Conditioning

    Science.gov (United States)

    Woods, Amanda M.; Bouton, Mark E.

    2008-01-01

    Five experiments with rat subjects compared the effects of immediate and delayed extinction on the durability of extinction learning. Three experiments examined extinction of fear conditioning (using the conditioned emotional response method), and two experiments examined extinction of appetitive conditioning (using the food-cup entry method). In…

  20. Trophically Unique Species Are Vulnerable to Cascading Extinction

    OpenAIRE

    Petchey, Owen L.; Eklöf, Anna; Borrvall, Charlotte; Ebenman, Bo

    2008-01-01

    Understanding which species might become extinct and the consequences of such loss is critical. One consequence is a cascade of further, secondary extinctions. While a significant amount is known about the types of communities and species that suffer secondary extinctions, little is known about the consequences of secondary extinctions for biodiversity. Here we examine the effect of these secondary extinctions on trophic diversity, the range of trophic roles played by the species in a communi...

  1. Elevational distribution and extinction risk in birds.

    Directory of Open Access Journals (Sweden)

    Rachel L White

    Full Text Available Mountainous regions are hotspots of terrestrial biodiversity. Unlike islands, which have been the focus of extensive research on extinction dynamics, fewer studies have examined mountain ranges even though they face increasing threats from human pressures - notably habitat conversion and climate change. Limits to the taxonomic and geographical extent and resolution of previously available information have precluded an explicit assessment of the relative role of elevational distribution in determining extinction risk. We use a new global species-level avian database to quantify the influence of elevational distribution (range, maximum and midpoint on extinction risk in birds at the global scale. We also tested this relationship within biogeographic realms, higher taxonomic levels, and across phylogenetic contrasts. Potential confounding variables (i.e. phylogenetic, distributional, morphological, life history and niche breadth were also tested and controlled for. We show that the three measures of elevational distribution are strong negative predictors of avian extinction risk, with elevational range comparable and complementary to that of geographical range size. Extinction risk was also found to be positively associated with body weight, development and adult survival, but negatively associated with reproduction and niche breadth. The robust and consistent findings from this study demonstrate the importance of elevational distribution as a key driver of variation in extinction dynamics in birds. Our results also highlight elevational distribution as a missing criterion in current schemes for quantifying extinction risk and setting species conservation priorities in birds. Further research is recommended to test for generality across non-avian taxa, which will require an advance in our knowledge of species' current elevational ranges and increased efforts to digitise and centralise such data.

  2. Rarity, species richness, and the threat of extinction--are plants the same as animals?

    Directory of Open Access Journals (Sweden)

    Sandra Knapp

    2011-05-01

    Full Text Available Assessment of conservation status is done both for areas or habitats and for species (or taxa. IUCN Red List categories have been the principal method of categorising species in terms of extinction risk, and have been shown to be robust and helpful in the groups for which they have been developed. A recent study highlights properties associated with extinction risk in flowering plants, focusing on the species-rich hot spot of the Cape region of South Africa, and concludes that merely following methods derived from studies of vertebrates may not provide the best estimates of extinction risk for plants. Biology, geography, and history all are important factors in risk, and the study poses many questions about how we categorise and assess species for conservation priorities.

  3. Conservation Implications of the Prevalence and Representation of Locally Extinct Mammals in the Folklore of Native Americans

    Directory of Open Access Journals (Sweden)

    Preston Matthew

    2009-01-01

    Full Text Available Many rationales for wildlife conservation have been suggested. One rationale not often mentioned is the impact of extinctions on the traditions of local people, and conservationists′ subsequent need to strongly consider culturally based reasons for conservation. As a first step in strengthening the case for this rationale, we quantitatively examined the presence and representation of eight potentially extinct mammals in folklore of 48 Native American tribes that live/lived near to 11 national parks in the United States. We aimed to confirm if these extinct animals were traditionally important species for Native Americans. At least one-third of the tribes included the extinct mammals in their folklore (N=45 of 124 and about half of these accounts featured the extinct species with positive and respectful attitudes, especially the carnivores. This research has shown that mammals that might have gone locally extinct have been prevalent and important in Native American traditions. Research is now needed to investigate if there indeed has been or might be any effects on traditions due to these extinctions. Regardless, due to even the possibility that the traditions of local people might be adversely affected by the loss of species, conservationists might need to consider not only all the biological reasons to conserve, but also cultural ones.

  4. Facilitation of extinction and re-extinction of operant behavior in mice by chlordiazepoxide and D-cycloserine.

    Science.gov (United States)

    Leslie, Julian C; Norwood, Kelly

    2013-05-01

    The aim was to compare operant extinction with re-extinction following re-acquisition and to investigate neuropharmacological mechanisms through administration of drugs potentiating GABAergic or glutamatergic systems. Groups of C57Bl/6 mice were trained to lever press for food on a fixed ratio schedule, then extinguished with or without pre-session chlordiazepoxide or post-session d-cycloserine administration (15mg/kg in each case), then retrained to lever press for food, then re-extinguished with or without pre-session chlordiazepoxide or post-session d-cycloserine. Under vehicle injections, extinction and re-extinction curves were indistinguishable, but drug treatments showed that there was less resistance to extinction in the re-extinction phase. Chlordiazepoxide facilitated extinction and re-extinction, with an earlier effect during re-extinction. d-Cycloserine also facilitated extinction and re-extinction, with some evidence of an earlier effect during re-extinction. These results replicate and extend earlier findings with operant extinction, but differ from some previous reports of d-cycloserine on re-extinction of Pavlovian conditioned fear. Implications for accounts of the similarities and differences between neural mechanisms of extinction following either Pavlovian or operant conditioning, and applications of these findings, are discussed.

  5. The transition from memory retrieval to extinction

    Directory of Open Access Journals (Sweden)

    Cammarota Martín

    2004-01-01

    Full Text Available Memory is measured by measuring retrieval. Retrieval is often triggered by the conditioned stimulus (CS; however, as known since Pavlov, presentation of the CS alone generates extinction. One-trial avoidance (IA is a much used conditioned fear paradigm in which the CS is the safe part of a training apparatus, the unconditioned stimulus (US is a footshock and the conditioned response is to stay in the safe area. In IA, retrieval is measured without the US, as latency to step-down from the safe area (i.e., a platform. Extinction is installed at the moment of the first unreinforced test session, as clearly shown by the fact that many drugs, including PKA, ERK and protein synthesis inhibitors as well as NMDA receptor antagonists, hinder extinction when infused into the hippocampus or the basolateral amygdala at the moment of the first test session but not later. Some, but not all the molecular systems required for extinction are also activated by retrieval, further endorsing the hypothesis that although retrieval is behaviorally and biochemically necessary for the generation of extinction, this last process constitutes a new learning secondary to the unreinforced expression of the original trace.

  6. Fluoxetine Facilitates Fear Extinction Through Amygdala Endocannabinoids.

    Science.gov (United States)

    Gunduz-Cinar, Ozge; Flynn, Shaun; Brockway, Emma; Kaugars, Katherine; Baldi, Rita; Ramikie, Teniel S; Cinar, Resat; Kunos, George; Patel, Sachin; Holmes, Andrew

    2016-05-01

    Pharmacologically elevating brain endocannabinoids (eCBs) share anxiolytic and fear extinction-facilitating properties with classical therapeutics, including the selective serotonin reuptake inhibitor, fluoxetine. There are also known functional interactions between the eCB and serotonin systems and preliminary evidence that antidepressants cause alterations in brain eCBs. However, the potential role of eCBs in mediating the facilitatory effects of fluoxetine on fear extinction has not been established. Here, to test for a possible mechanistic contribution of eCBs to fluoxetine's proextinction effects, we integrated biochemical, electrophysiological, pharmacological, and behavioral techniques, using the extinction-impaired 129S1/Sv1mJ mouse strain. Chronic fluoxetine treatment produced a significant and selective increase in levels of anandamide in the BLA, and an associated decrease in activity of the anandamide-catabolizing enzyme, fatty acid amide hydrolase. Slice electrophysiological recordings showed that fluoxetine-induced increases in anandamide were associated with the amplification of eCB-mediated tonic constraint of inhibitory, but not excitatory, transmission in the BLA. Behaviorally, chronic fluoxetine facilitated extinction retrieval in a manner that was prevented by systemic or BLA-specific blockade of CB1 receptors. In contrast to fluoxetine, citalopram treatment did not increase BLA eCBs or facilitate extinction. Taken together, these findings reveal a novel, obligatory role for amygdala eCBs in the proextinction effects of a major pharmacotherapy for trauma- and stressor-related disorders and anxiety disorders.

  7. Quantitative analysis of forest fire extinction efficiency

    Directory of Open Access Journals (Sweden)

    Miguel E. Castillo-Soto

    2015-08-01

    Full Text Available Aim of study: Evaluate the economic extinction efficiency of forest fires, based on the study of fire combat undertaken by aerial and terrestrial means. Area of study, materials and methods: Approximately 112,000 hectares in Chile. Records of 5,876 forest fires that occurred between 1998 and 2009 were analyzed. The area further provides a validation sector for results, by incorporating databases for the years 2010 and 2012. The criteria used for measuring extinction efficiency were economic value of forestry resources, Contraction Factor analysis and definition of the extinction costs function. Main results: It is possible to establish a relationship between burnt area, extinction costs and economic losses. The method proposed may be used and adapted to other fire situations, requiring unit costs for aerial and terrestrial operations, economic value of the property to be protected and speed attributes of fire spread in free advance. Research highlights: The determination of extinction efficiency in containment works of forest fires and potential projection of losses, different types of plant fuel and local conditions favoring the spread of fire broaden the admissible ranges of a, φ and Ce considerably.

  8. Mass Extinctions and Biosphere-Geosphere Stability

    Science.gov (United States)

    Rothman, Daniel; Bowring, Samuel

    2015-04-01

    Five times in the past 500 million years, mass extinctions have resulted in the loss of greater than three-fourths of living species. Each of these events is associated with significant environmental change recorded in the carbon-isotopic composition of sedimentary rocks. There are also many such environmental events in the geologic record that are not associated with mass extinctions. What makes them different? Two factors appear important: the size of the environmental perturbation, and the time scale over which it occurs. We show that the natural perturbations of Earth's carbon cycle during the past 500 million years exhibit a characteristic rate of change over two orders of magnitude in time scale. This characteristic rate is consistent with the maximum rate that limits quasistatic (i.e., near steady-state) evolution of the carbon cycle. We identify this rate with marginal stability, and show that mass extinctions occur on the fast, unstable side of the stability boundary. These results suggest that the great extinction events of the geologic past, and potentially a "sixth extinction" associated with modern environmental change, are characterized by common mechanisms of instability.

  9. Determining the extragalactic extinction law with SALT

    CERN Document Server

    Finkelman, Ido; Kniazev, Alexei Y; Buckley, David; O'Donoghue, Darragh; Hashimoto, Yas; Loaring, Nicola; Romero, Encarni; Still, Martin; Vaisanen, Petri

    2008-01-01

    We present CCD imaging observations of early-type galaxies with dark lanes obtained with the Southern African Large Telescope (SALT) during its performance-verification phase. We derive the extinction law by the extragalactic dust in the dark lanes in the spectral range 1.11mu m^{-1} < lambda^{-1} < 2.94 mu m^{-1} by fitting model galaxies to the unextinguished parts of the image, and subtracting from these the actual images. We find that the extinction curves run parallel to the Galactic extinction curve, which implies that the properties of dust in the extragalactic enviroment are similar to those of the Milky Way. The ratio of the total V band extinction to the selective extinction between the V and B bands is derived for each galaxy with an average of 2.82+-0.38, compared to a canonical value of 3.1 for the Milky Way. The similar values imply that galaxies with well-defined dark lanes have characteristic dust grain sizes similar to those of Galactic dust.

  10. Changes in environmental conditions as the cause of the marine biota Great Mass Extinction at the Triassic-Jurassic boundary

    Science.gov (United States)

    Barash, M. S.

    2016-02-01

    In the interval of the Triassic-Jurassic boundary, 80% of the marine species became extinct. Four main hypotheses about the causes of this mass extinction are considered: volcanism, climatic oscillations, sea level variations accompanied by anoxia, and asteroid impact events. The extinction was triggered by an extensive flooding of basalts in the Central Atlantic Magmatic Province. Furthermore, a number of meteoritic craters have been found. Under the effect of cosmic causes, two main sequences of events developed on the Earth: terrestrial ones, leading to intensive volcanism, and cosmic ones (asteroid impacts). Their aftermaths, however, were similar in terms of the chemical compounds and aerosols released. As a consequence, the greenhouse effect, dimming of the atmosphere (impeding photosynthesis), ocean stagnation, and anoxia emerged. Then, biological productivity decreased and food chains were destroyed. Thus, the entire ecosystem was disturbed and a considerable part of the biota became extinct.

  11. Astrophysical life extinctions what killed the dinosaurs?

    CERN Document Server

    Dar, Arnon

    1999-01-01

    Geological records indicate that the exponential diversification of marine and continental life on Earth in the past 500 My was interrupted by many life extinctions. They also indicate that the major mass extinctions were correlated in time with large meteoritic impacts, gigantic volcanic eruptions, sea regressions and drastic changes in global climate. Some of these catastrophes coincided in time. The astrophysical life extinction mechanisms which were proposed so far, in particular, meteoritic impacts, nearby supernova explosions, passage through molecular or dark matter clouds, and Galactic gamma/cosmic ray bursts cannot explain the time coincidences between these catastrophes. However, recent observations suggest that many planetary-mass objects may be present in the outer solar system between the Kuiper belt and the Oort cloud. Gravitational perturbations may occasionally bring them into the inner solar system. Their passage near Earth could have generated gigantic tidal waves, large volcanic eruptions, ...

  12. Mammal extinctions, body size, and paleotemperature

    Science.gov (United States)

    Bown, T.M.; Holroyd, P.A.; Rose, K.D.

    1994-01-01

    There is a general inverse relationship between the natural logarithm of tooth area (a body size indicator) of some fossil mammals and paleotemperature during approximately 2.9 million years of the early Eocene in the Bighorn Basin of northwest Wyoming. When mean temperatures became warmer, tooth areas tended to become smaller. During colder times, larger species predominated; these generally became larger or remained the same size. Paleotemperature trends also markedly affected patterns of local (and, perhaps, regional) extinction and immigration. New species appeared as immigrants during or near the hottest (smaller forms) and coldest (larger forms) intervals. Paleotemperature trend reversals commonly resulted in the ultimate extinction of both small forms (during cooling intervals) and larger forms (during warming intervals). These immigrations and extinctions mark faunal turnovers that were also modulated by sharp increases in sediment accumulation rate.

  13. Does supplementary reinforcement of stereotypy facilitate extinction?

    Science.gov (United States)

    Dozier, Claudia L; Iwata, Brian A; Wilson, David M; Thomason-Sassi, Jessica L; Roscoe, Eileen M

    2013-01-01

    Results of several studies suggest that delivery of supplemental (social) reinforcement for stereotypy might facilitate its subsequent extinction. We examined this possibility with 9 subjects who engaged in stereotypy by including methodological refinements to ensure that (a) subjects' stereotypy was maintained in the absence of social consequences, (b) supplementary reinforcers were highly preferred and were shown to be reinforcers for some behavior, and (c) subjects were exposed to lengthy reinforcement and extinction conditions. In spite of these modifications, only 4 subjects' stereotypy increased when supplementary reinforcement was delivered contingent on stereotypy, and no subject's stereotypy decreased below initial baseline levels when social reinforcement was subsequently withheld. Decreases in stereotypy occurred with the implementation of noncontingent reinforcement. Thus, delivery of supplementary reinforcers either did not increase stereotypy or did not facilitate extinction of stereotypy maintained by automatic reinforcement. We discuss the practical and conceptual bases of these results with respect to our current understanding of function-based interventions.

  14. Extinction in four species cyclic competition

    Science.gov (United States)

    Intoy, Ben; Pleimling, Michel

    2013-08-01

    When four species compete stochastically in a cyclic way, the formation of two teams of mutually neutral partners is observed. In this paper we study through numerical simulations the extinction processes that can take place in this system both in the well mixed case as well as on different types of lattices. The different routes to extinction are revealed by the probability distribution of the domination time, i.e. the time needed for one team to fully occupy the system. If swapping is allowed between neutral partners, then the probability distribution is dominated by very long-lived states where a few very large domains persist, each domain being occupied by a mix of individuals from species that form one of the teams. Many aspects of the possible extinction scenarios are lost when only considering averaged quantities, such as for example the mean domination time.

  15. Were Malagasy Uncarina fruits dispersed by the extinct elephant bird?

    Directory of Open Access Journals (Sweden)

    N. Illing

    2010-02-01

    Full Text Available We hypothesise that the spiny fruits of the endemic Madagascar
    genus Uncarina (Pedaliaceae are trample burrs that evolved to be
    dispersed on the feet of the extinct elephant bird (Aepyornis. Our
    evidence is: i the morphology of the fruit with its large grapple
    hooks is more likely to attach to a foot than to adhere to fur and
    ii the presentation of mature fruits on the ground rather than in the
    canopy. These differences to adhesive burrs make lemurs unlikely
    dispersers. We argue, given the absence of other large terrestrial
    mammals in Madagascar, that the most likely dispersers of
    Uncarina fruits were the extinct large birds. If correct, our hypothesis
    has implications for conservation of Uncarina, the biogeography
    of the elephant birds and dispersal biology. For
    example, we predict that the demography of Uncarina will be
    skewed towards adult plants, and that the dispersal mutualism
    could possibly be rescued by domestic animals.

  16. Extinction Mapping of Nearby Galaxies Using LEGUS

    Science.gov (United States)

    Kahre, Lauren; Walterbos, Rene A. M.; Calzetti, Daniela; Sabbi, Elena; Ubeda, Leonardo; LEGUS Collaboration

    2017-01-01

    Extinction by dust affects studies of star formation and stellar evolution in galaxies. There are different ways to measure the distribution of dust column densities across galaxies. Here we present work based on extinctions measured towards individual massive stars.Isochrones of massive stars lie in the same location on a color-color diagram with little dependence on metallicity and luminosity class, so the extinction can be directly derived from the observed photometry. We develop a method for generating extinction maps using photometry of massive stars from the Hubble Space Telescope for the nearly 50 galaxies observed by the Legacy Extragalactic Ultraviolet Survey (LEGUS). The derived extinction maps will allow us to correct ground-based and HST Halpha maps for extinction, and will be used to constrain changes in the dust-to-gas ratio across the galaxy sample and in different star formation, metallicity and morphological environments. Previous studies have found links between galaxy metallicity and the dust-to-gas mass ratio. Dust abundance and gas metallicity are critical constraints for chemical and galaxy evolution models. We present a study of LEGUS galaxies spanning a range of distances, metallicities, and galaxy morphologies, including metal-poor dwarfs Holmberg I and II and giant spirals NGC 6503 and NGC 628. We see clear evidence for changes in the dust-to-gas mass ratio with changing metallicity. We also examine changes in the dust-to-gas mass ratio with galactocentric radius. Ultimately, we will provide constraints on the dust-to-gas mass ratio across a wide range of galaxy environments.

  17. Abrupt climate change and extinction events

    Science.gov (United States)

    Crowley, Thomas J.

    1988-01-01

    There is a growing body of theoretical and empirical support for the concept of instabilities in the climate system, and indications that abrupt climate change may in some cases contribute to abrupt extinctions. Theoretical indications of instabilities can be found in a broad spectrum of climate models (energy balance models, a thermohaline model of deep-water circulation, atmospheric general circulation models, and coupled ocean-atmosphere models). Abrupt transitions can be of several types and affect the environment in different ways. There is increasing evidence for abrupt climate change in the geologic record and involves both interglacial-glacial scale transitions and the longer-term evolution of climate over the last 100 million years. Records from the Cenozoic clearly show that the long-term trend is characterized by numerous abrupt steps where the system appears to be rapidly moving to a new equilibrium state. The long-term trend probably is due to changes associated with plate tectonic processes, but the abrupt steps most likely reflect instabilities in the climate system as the slowly changing boundary conditions caused the climate to reach some threshold critical point. A more detailed analysis of abrupt steps comes from high-resolution studies of glacial-interglacial fluctuations in the Pleistocene. Comparison of climate transitions with the extinction record indicates that many climate and biotic transitions coincide. The Cretaceous-Tertiary extinction is not a candidate for an extinction event due to instabilities in the climate system. It is quite possible that more detailed comparisons and analysis will indicate some flaws in the climate instability-extinction hypothesis, but at present it appears to be a viable candidate as an alternate mechanism for causing abrupt environmental changes and extinctions.

  18. From Pavlov to PTSD: the extinction of conditioned fear in rodents, humans, and anxiety disorders.

    Science.gov (United States)

    VanElzakker, Michael B; Dahlgren, M Kathryn; Davis, F Caroline; Dubois, Stacey; Shin, Lisa M

    2014-09-01

    Nearly 100 years ago, Ivan Pavlov demonstrated that dogs could learn to use a neutral cue to predict a biologically relevant event: after repeated predictive pairings, Pavlov's dogs were conditioned to anticipate food at the sound of a bell, which caused them to salivate. Like sustenance, danger is biologically relevant, and neutral cues can take on great salience when they predict a threat to survival. In anxiety disorders such as posttraumatic stress disorder (PTSD), this type of conditioned fear fails to extinguish, and reminders of traumatic events can cause pathological conditioned fear responses for decades after danger has passed. In this review, we use fear conditioning and extinction studies to draw a direct line from Pavlov to PTSD and other anxiety disorders. We explain how rodent studies have informed neuroimaging studies of healthy humans and humans with PTSD. We describe several genes that have been linked to both PTSD and fear conditioning and extinction and explain how abnormalities in fear conditioning or extinction may reflect a general biomarker of anxiety disorders. Finally, we explore drug and neuromodulation treatments that may enhance therapeutic extinction in anxiety disorders.

  19. From Pavlov to PTSD: The extinction of conditioned fear in rodents, humans, and in anxiety disorders

    Science.gov (United States)

    VanElzakker, Michael B.; Dahlgren, M. Kathryn; Davis, F. Caroline; Dubois, Stacey; Shin, Lisa M.

    2014-01-01

    Nearly 100 years ago, Ivan Pavlov demonstrated that dogs could learn to use a neutral cue to predict a biologically relevant event: after repeated predictive pairings, Pavlov's dogs were conditioned to anticipate food at the sound of a bell, which caused them to salivate. Like sustenance, danger is biologically relevant, and neutral cues can take on great salience when they predict a threat to survival. In anxiety disorders such as posttraumatic stress disorder (PTSD), this type of conditioned fear fails to extinguish, and reminders of traumatic events can cause pathological conditioned fear responses for decades after danger has passed. In this review, we use fear conditioning and extinction studies to draw a direct line from Pavlov to PTSD and other anxiety disorders. We explain how rodent studies have informed neuroimaging studies of healthy humans and humans with PTSD. We describe several genes that have been linked to both PTSD and fear conditioning and extinction and explain how abnormalities in fear conditioning or extinction may reflect a general biomarker of anxiety disorders. Finally, we explore drug and neuromodulation treatments that may enhance therapeutic extinction in anxiety disorders. PMID:24321650

  20. Extinction rate fragility in population dynamics.

    Science.gov (United States)

    Khasin, M; Dykman, M I

    2009-08-01

    Population extinction is of central interest for population dynamics. It may occur from a large rare fluctuation. We find that, in contrast to related large-fluctuation effects like noise-induced interstate switching, quite generally extinction rates in multipopulation systems display fragility, where the height of the effective barrier to be overcome in the fluctuation depends on the system parameters nonanalytically. We show that one of the best-known models of epidemiology, the susceptible-infectious-susceptible model, is fragile to total population fluctuations.

  1. Extinction space--a method for the quantification and classification of changes in morphospace across extinction boundaries.

    Science.gov (United States)

    Korn, Dieter; Hopkins, Melanie J; Walton, Sonny A

    2013-10-01

    Three main modes of extinction are responsible for reductions in morphological disparity: (1) random (caused by a nonselective extinction event); (2) marginal (a symmetric, selective extinction event trimming the margin of morphospace); and (3) lateral (an asymmetric, selective extinction event eliminating one side of the morphospace). These three types of extinction event can be distinguished from one another by comparing changes in three measures of morphospace occupation: (1) the sum of range along the main axes; (2) the sum of variance; and (3) the position of the centroid. Computer simulations of various extinction events demonstrate that the pre-extinction distribution of taxa (random or normal) in the morphospace has little influence on the quantification of disparity changes, whereas the modes of the extinction events play the major role. Together, the three disparity metrics define an "extinction-space" in which different extinction events can be directly compared with one another. Application of this method to selected extinction events (Frasnian-Famennian, Devonian-Carboniferous, and Permian-Triassic) of the Ammonoidea demonstrate the similarity of the Devonian events (selective extinctions) but the striking difference from the end-Permian event (nonselective extinction). These events differ in their mode of extinction despite decreases in taxonomic diversity of similar magnitude.

  2. Linking Indices for Biodiversity Monitoring to Extinction Risk Theory

    Science.gov (United States)

    Mccarthy, Michael A; Moore, Alana L; Krauss, Jochen; Morgan, John W; Clements, Christopher F

    2014-01-01

    Biodiversity indices often combine data from different species when used in monitoring programs. Heuristic properties can suggest preferred indices, but we lack objective ways to discriminate between indices with similar heuristics. Biodiversity indices can be evaluated by determining how well they reflect management objectives that a monitoring program aims to support. For example, the Convention on Biological Diversity requires reporting about extinction rates, so simple indices that reflect extinction risk would be valuable. We developed 3 biodiversity indices that are based on simple models of population viability that relate extinction risk to abundance. We based the first index on the geometric mean abundance of species and the second on a more general power mean. In a third index, we integrated the geometric mean abundance and trend. These indices require the same data as previous indices, but they also relate directly to extinction risk. Field data for butterflies and woodland plants and experimental studies of protozoan communities show that the indices correlate with local extinction rates. Applying the index based on the geometric mean to global data on changes in avian abundance suggested that the average extinction probability of birds has increased approximately 1% from 1970 to 2009. Conectando Índices para el Monitoreo de la Biodiversidad con la Teoría de Riesgo de Extinción Resumen Los índices de biodiversidad combinan frecuentemente los datos de diferentes especies cuando se usan en los programas de monitoreo. Las propiedades heurísticas pueden sugerir índices preferidos, pero carecemos de medios objetivos para discriminar a los índices con propiedades heurísticas similares. Los índices de biodiversidad pueden evaluarse al determinar qué tan bien reflejan los objetivos de manejo que un programa de monitoreo busca apoyar. Por ejemplo, la Convención sobre la Diversidad Biológica requiere reportar las tasas de extinción, así que los

  3. Extinction debt in source-sink metacommunities.

    Directory of Open Access Journals (Sweden)

    Nicolas Mouquet

    Full Text Available In an increasingly modified world, understanding and predicting the consequences of landscape alteration on biodiversity is a challenge for ecologists. To this end, metacommunity theory has developed to better understand the complexity of local and regional interactions that occur across larger landscapes. While metacommunity ecology has now provided several alternative models of species coexistence at different spatial scales, predictions regarding the consequences of landscape alteration have been done exclusively for the competition-colonization trade off model (CC. In this paper we investigate the effects of landscape perturbation on source-sink metacommunities. We show that habitat destruction perturbs the equilibria among species competitive effects within the metacommunity, driving both direct extinctions and an indirect extinction debt. As in CC models, we found a time lag for extinction following habitat destruction that varied in length depending upon the relative importance of direct and indirect effects. However, in contrast to CC models, we found that the less competitive species are more affected by habitat destruction. The best competitors can sometimes even be positively affected by habitat destruction, which corresponds well with the results of field studies. Our results are complementary to those results found in CC models of metacommunity dynamics. From a conservation perspective, our results illustrate that landscape alteration jeopardizes species coexistence in patchy landscapes through complex indirect effects and delayed extinctions patterns.

  4. Self-extinction through optimizing selection

    Science.gov (United States)

    Parvinen, Kalle; Dieckmann, Ulf

    2013-01-01

    Evolutionary suicide is a process in which selection drives a viable population to extinction. So far, such selection-driven self-extinction has been demonstrated in models with frequency-dependent selection. This is not surprising, since frequency-dependent selection can disconnect individual-level and population-level interests through environmental feedback. Hence it can lead to situations akin to the tragedy of the commons, with adaptations that serve the selfish interests of individuals ultimately ruining a population. For frequency-dependent selection to play such a role, it must not be optimizing. Together, all published studies of evolutionary suicide have created the impression that evolutionary suicide is not possible with optimizing selection. Here we disprove this misconception by presenting and analyzing an example in which optimizing selection causes self-extinction. We then take this line of argument one step further by showing, in a further example, that selection-driven self-extinction can occur even under frequency-independent selection. PMID:23583808

  5. Opportunities and costs for preventing vertebrate extinctions

    DEFF Research Database (Denmark)

    Conde, Dalia Amor; Colchero, Fernando; Güneralp, Burak

    2015-01-01

    [2] . However, averting human-induced species extinctions within AZE sites requires enhanced planning tools to increase the chances of success [3] . Here, we assess the potential for ensuring the long-term conservation of AZE vertebrate species (157 mammals, 165 birds, 17 reptiles and 502 amphibians...

  6. Stressor controllability modulates fear extinction in humans.

    Science.gov (United States)

    Hartley, Catherine A; Gorun, Alyson; Reddan, Marianne C; Ramirez, Franchesca; Phelps, Elizabeth A

    2014-09-01

    Traumatic events are proposed to play a role in the development of anxiety disorders, however not all individuals exposed to extreme stress experience a pathological increase in fear. Recent studies in animal models suggest that the degree to which one is able to control an aversive experience is a critical factor determining its behavioral consequences. In this study, we examined whether stressor controllability modulates subsequent conditioned fear expression in humans. Participants were randomly assigned to an escapable stressor condition, a yoked inescapable stressor condition, or a control condition involving no stress exposure. One week later, all participants underwent fear conditioning, fear extinction, and a test of extinction retrieval the following day. Participants exposed to inescapable stress showed impaired fear extinction learning and increased fear expression the following day. In contrast, escapable stress improved fear extinction and prevented the spontaneous recovery of fear. Consistent with the bidirectional controllability effects previously reported in animal models, these results suggest that one's degree of control over aversive experiences may be an important factor influencing the development of psychological resilience or vulnerability in humans.

  7. Extinction and renewal of conditioned sexual responses

    NARCIS (Netherlands)

    Brom, M.; Laan, E.; Everaerd, W.; Spinhoven, P.; Both, S.

    2014-01-01

    INTRODUCTION: Extinction involves an inhibitory form of new learning that is highly dependent on the context for expression. This is supported by phenomena such as renewal and spontaneous recovery, which may help explain the persistence of appetitive behavior, and related problems such as addictions

  8. Molar extinction coefficients of some fatty acids

    DEFF Research Database (Denmark)

    Sandhu, G.K.; Singh, K.; Lark, B.S.;

    2002-01-01

    ) and stearic acid (C18H36O2), has been measured at the photon energies 81, 356, 511, 662, 1173 and 1332 keV. Experimental values for the molar extinction coefficient, the effective atomic number and the electron density have been derived and compared with theoretical calculations. There is good agreement...

  9. Attentional, Associative, and Configural Mechanisms in Extinction

    Science.gov (United States)

    Larrauri, Jose A.; Schmajuk, Nestor A.

    2008-01-01

    The participation of attentional and associative mechanisms in extinction, spontaneous recovery, external disinhibition, renewal, reinstatement, and reacquisition was evaluated through computer simulations with an extant computational model of classical conditioning (N. A. Schmajuk, Y. Lam, & J. A. Gray, 1996; N. A. Schmajuk & J. A. Larrauri,…

  10. Methylphenidate Enhances Extinction of Contextual Fear

    Science.gov (United States)

    Abraham, Antony D.; Cunningham, Christopher L.; Lattal, K. Matthew

    2012-01-01

    Methylphenidate (MPH, Ritalin) is a norepinephrine and dopamine transporter blocker that is widely used in humans for treatment of attention deficit disorder and narcolepsy. Although there is some evidence that targeted microinjections of MPH may enhance fear acquisition, little is known about the effect of MPH on fear extinction. Here, we show…

  11. Extinction and renewal of conditioned sexual responses.

    Directory of Open Access Journals (Sweden)

    Mirte Brom

    Full Text Available INTRODUCTION: Extinction involves an inhibitory form of new learning that is highly dependent on the context for expression. This is supported by phenomena such as renewal and spontaneous recovery, which may help explain the persistence of appetitive behavior, and related problems such as addictions. Research on these phenomena in the sexual domain is lacking, where it may help to explain the persistence of learned sexual responses. METHOD: Men (n = 40 and women (n = 62 participated in a differential conditioning paradigm, with genital vibrotactile stimulation as US and neutral pictures as conditional stimuli (CSs. Dependent variables were genital and subjective sexual arousal, affect, US expectancy, and approach and avoid tendencies towards the CSs. Extinction and renewal of conditioned sexual responses were studied by context manipulation (AAA vs. ABA condition. RESULTS: No renewal effect of genital conditioned responding could be detected, but an obvious recovery of US expectancy following a context change after extinction (ABA was demonstrated. Additionally, women demonstrated recovery of subjective affect and subjective sexual arousal. Participants in the ABA demonstrated more approach biases towards stimuli. CONCLUSIONS: The findings support the context dependency of extinction and renewal of conditioned sexual responses in humans. This knowledge may have implications for the treatment of disturbances in sexual appetitive responses such as hypo- and hypersexuality.

  12. Time to extinction of bird populations

    NARCIS (Netherlands)

    Sæther, B-E.; Engen, S.; Møller, A.P.; Visser, M.E.; Matthysen, E.; Fiedler, W.; Lambrechts, M.M.; Becker, P.H.; Brommer, J.E.; Dickinson, J.; du Feu, C.; Gehlbach, F.R.; Merilä, J.; Rendell, W.; Robertson, R.J.; Thomson, D.L.; Török, J.

    2005-01-01

    The risk of extinction of populations has not previously been empirically related to parameters characterizing their population dynamics. To analyze this relationship, we simulated how the distribution of population dynamical characters changed as a function of time, in both the remaining and the ex

  13. D-cycloserine facilitates context-specific fear extinction learning.

    Science.gov (United States)

    Bouton, Mark E; Vurbic, Drina; Woods, Amanda M

    2008-10-01

    D-cycloserine (DCS) may facilitate fear extinction learning, but the behavioral consequences and mechanisms behind this effect are not well understood at present. In this paper, we re-analyze data from previously reported null result experiments and find that rats showing above-median extinction learning during DCS treatment benefited from the drug, whereas rats showing below-median (and in this case little) extinction learning did not. Two additional experiments found that DCS facilitated extinction learning when specifically combined with a moderate, but not a small, number of extinction trials. DCS thus facilitates extinction learning only if the behavioral procedure first engages the extinction learning process. The benefits of the drug, however, were specific to the context in which extinction was learned--i.e., DCS did not prevent or influence the renewal of fear observed when the extinguished cue was tested in the original conditioning context.

  14. Modeling the Infrared Extinction toward the Galactic Center

    CERN Document Server

    Gao, Jian; Jiang, B W

    2013-01-01

    We model the ~1--19$\\mum$ infrared (IR) extinction curve toward the Galactic Center (GC) in terms of the standard silicate-graphite interstellar dust model. The grains are taken to have a power law size distribution with an exponential decay above some size. The best-fit model for the GC IR extinction constrains the visual extinction to be Av~38--42 mag. The limitation of the model, i.e., its difficulty in simultaneously reproducing both the steep ~1--3$\\mum$ near-IR extinction and the flat ~3--8$\\mum$ mid-IR extinction is discussed. We argue that this difficulty could be alleviated by attributing the extinction toward the GC to a combination of dust in different environments: dust in diffuse regions (characterized by small Rv and steep near-IR extinction), and dust in dense regions (characterized by large Rv and flat UV extinction).

  15. Inferring modern extinction risk from fossil occupancy trajectories

    Science.gov (United States)

    Kiessling, Wolfgang; Kocsis, Adam

    2016-04-01

    Besides providing information on ancient mass extinctions and intrinsic extinction risk, the fossil record may also provide useful data for assessing the extinction risk of extant species. Here we analyse the palaeontological trajectories of geographical occupancy in extant marine species to identify species that have been declining over geological time scales and may thus be more prone to extinction than expanding species. The slopes of these occupancy trajectories are used to categorize evolutionary extinction risk. Mapping the risk at global scale we find that low to mid latitude regions are at significantly higher risk than high latitude regions. We also find a moderate correspondence between high extinction risk on geological time scales and modern extinction risk for reef corals and propose to add fossil data to the assessment of current extinction risk, especially for the notoriously data deficient marine taxa.

  16. A REMARK ON EXTINCTION OF A CLASS OF SUPERPROCESSES

    Institute of Scientific and Technical Information of China (English)

    ZHAOXUELEI

    1996-01-01

    The extinction of a class of superprocesses associated with general branching characteristics and underlying Markov processes is investigted, The extinction is closely associated with the branching characteristics and the recurrence and transience of underlying processes.

  17. Grey Milky Way Extinction from SDSS Stellar Photometry

    OpenAIRE

    Gorbikov, Evgeny; Brosch, Noah

    2009-01-01

    We report results concerning the distribution and properties of galactic extinction at high galactic latitudes derived from stellar statistics using the Sloan Digital Sky Survey (SDSS). We use the classical Wolf diagram method to identify regions with extinction, and derive the extinction and the extinction law of the dust using all five SDSS spectral bands. We estimate the distance to the extinguishing medium using simple assumptions about the stellar populations in the line of sight. We rep...

  18. Endangered Species and Natural Resource Exploitation: Extinction vs. Coexistence

    OpenAIRE

    Tsur, Yacov; Zemel, Amos

    1994-01-01

    The threat on the survival of animal species due to intensive use of natural resources is incorporated within resource management models, paying special attention to uncertainty regarding the conditions that lead to extinction. The manner in which the potential benefits forgone due to the species extinction (denoted extinction penalty) induce more conservative exploitation policies is studied in detail. When the extinction penalty is ignored, the optimal policy is to drive the resource stock ...

  19. EVOLUCIÓN, TEORÍA DE LAS EXTINCIONES, COMPLEJIDAD Evolution, Theory of Extinctions, Complexity

    Directory of Open Access Journals (Sweden)

    CARLOS EDUARDO MALDONADO

    Full Text Available Este texto discute la posibilidad del desarrollo de una teoría de las extinciones, una teoría inexistente hasta la fecha, y que vendría a ser la contraparte o el complemento de la teoría de la evolución. El problema central es el de la exploración de una teoría general de la complejidad, una tarea que permanece abierta e inconclusa hasta el momento. La paleontología y la biología evolutiva pueden verse como las dos caras de una moneda cuyo rasgo distintivo no es el gradualismo, sino los equilibrios puntuados y el catastrofismo. El tema de las extinciones se concentra aquí en la importancia y el papel de las extinciones masivas. A partir del diálogo entre biología y paleontología, evolución y extinciones, varias reflexiones se extrapolan al plano social, cultural y filosófico. El marco amplio es el de las ciencias de la complejidad.This paper discusses the possibility of reaching a theory of extinctions, a theory nonexistent so far that can be taken as complementary to the theory of evolution. The core problem is here the exploration of the general theory of complexity, a task that remains open and without a definite conclusion until now. Paleontology and biology can be grasped as the two faces of one and the same token whose most salient feature is punctuated equilibria and catastrophism, and not gradualism any longer. Extinctions are viewed here particularly as massive extinctions. After the dialogue between paleontology and biology, evolution and extinctions, a number of reflections are extrapolated to the social, cultural and philosophical framework. The general context hence is the one provided by the sciences of complexity.

  20. Extinction of chained instrumental behaviors: Effects of consumption extinction on procurement responding.

    Science.gov (United States)

    Thrailkill, Eric A; Bouton, Mark E

    2016-03-01

    Operant behavior is typically organized into sequences of responses that eventually lead to a reinforcer. Response elements can be categorized as those that directly lead to reward consumption (i.e., a consumption response) and those that lead to the opportunity to make the consumption response (i.e., a procurement response). These responses often differ topographically and in terms of the discriminative stimuli that set the occasion for them. We have recently shown that extinction of the procurement response acts to weaken the specific associated consumption response, and that active inhibition of the procurement response is required for this effect. To expand the analysis of the associative structure of chains, in the present experiments we asked the reverse question: whether extinction of consumption behavior results in a decrease in the associated procurement response in a discriminated heterogeneous chain. In Experiment 1, extinction of consumption alone led to an attenuation of the associated procurement response only when rats were allowed to make the consumption response in extinction. Exposure to the consumption stimulus alone was not sufficient to produce weakened procurement responding. In Experiment 2, rats learned two distinct heterogeneous chains, and extinction of one consumption response specifically weakened the procurement response associated with it. The results add to the evidence suggesting that rats learn a highly specific associative structure in behavior chains, emphasizing the role of learning response inhibition in extinction.

  1. Global distribution and drivers of language extinction risk

    DEFF Research Database (Denmark)

    Amano, Tatsuya; Sandel, Brody; Eager, Heidi;

    2014-01-01

    Many of the world's languages face serious risk of extinction. Efforts to prevent this cultural loss are severely constrained by a poor understanding of the geographical patterns and drivers of extinction risk. We quantify the global distribution of language extinction risk-represented by small...

  2. Psychological and neural mechanisms of experimental extinction: a selective review.

    Science.gov (United States)

    Delamater, Andrew R; Westbrook, R Frederick

    2014-02-01

    The present review examines key psychological concepts in the study of experimental extinction and implications these have for an understanding of the underlying neurobiology of extinction learning. We suggest that many of the signature characteristics of extinction learning (spontaneous recovery, renewal, reinstatement, rapid reacquisition) can be accommodated by the standard associative learning theory assumption that extinction results in partial erasure of the original learning together with new inhibitory learning. Moreover, we consider recent behavioral and neural evidence that supports the partial erasure view of extinction, but also note shortcomings in our understanding of extinction circuits as these relate to the negative prediction error concept. Recent work suggests that common prediction error and stimulus-specific prediction error terms both may be required to explain neural plasticity both in acquisition and extinction learning. In addition, we suggest that many issues in the content of extinction learning have not been fully addressed in current research, but that neurobiological approaches should be especially helpful in addressing such issues. These include questions about the nature of extinction learning (excitatory CS-No US, inhibitory CS-US learning, occasion setting processes), especially as this relates to studies of the micro-circuitry of extinction, as well as its representational content (sensory, motivational, response). An additional understudied problem in extinction research is the role played by attention processes and their underlying neural networks, although some research and theory converge on the idea that extinction is accompanied by attention decrements (i.e., habituation-like processes).

  3. Inhibition of Estradiol Synthesis Impairs Fear Extinction in Male Rats

    Science.gov (United States)

    Graham, Bronwyn M.; Milad, Mohammed R.

    2014-01-01

    Emerging research has demonstrated that the sex hormone estradiol regulates fear extinction in female rodents and women. Estradiol may also regulate fear extinction in males, given its role in synaptic plasticity in both sexes. Here we report that inhibition of estradiol synthesis during extinction training, via the aromatase inhibitor fadrozole,…

  4. Slower Reacquisition after Partial Extinction in Human Contingency Learning

    Science.gov (United States)

    Morís, Joaquín; Barberia, Itxaso; Vadillo, Miguel A.; Andrades, Ainhoa; López, Francisco J.

    2017-01-01

    Extinction is a very relevant learning phenomenon from a theoretical and applied point of view. One of its most relevant features is that relapse phenomena often take place once the extinction training has been completed. Accordingly, as extinction-based therapies constitute the most widespread empirically validated treatment of anxiety disorders,…

  5. Fibroblast Growth Factor-2 Alters the Nature of Extinction

    Science.gov (United States)

    Graham, Bronwyn M.; Richardson, Rick

    2011-01-01

    These experiments examined the effects of the NMDA-receptor (NMDAr) antagonist MK801 on reacquisition and re-extinction of a conditioned fear that had been previously extinguished before injection of fibroblast growth factor-2 (FGF2) or vehicle. Recent findings have shown that relearning and re-extinction, unlike initial learning and extinction,…

  6. Othering Processes and STS Curricula: From Nineteenth Century Scientific Discourse on Interracial Competition and Racial Extinction to Othering in Biomedical Technosciences

    Science.gov (United States)

    Arteaga, Juan Manuel Sanchez; El-Hani, Charbel N.

    2012-01-01

    This paper analyzes the debates on "interracial competition" and "racial extinction" in the biological discourse on human evolution during the second half of the nineteenth century. Our intention is to discuss the ideological function of these biological concepts as tools for the naturalization and scientific legitimation of racial hierarchies…

  7. Compound stimulus extinction reduces spontaneous recovery in humans

    Science.gov (United States)

    Coelho, Cesar A.O.; Dunsmoor, Joseph E.

    2015-01-01

    Fear-related behaviors are prone to relapse following extinction. We tested in humans a compound extinction design (“deepened extinction”) shown in animal studies to reduce post-extinction fear recovery. Adult subjects underwent fear conditioning to a visual and an auditory conditioned stimulus (CSA and CSB, respectively) separately paired with an electric shock. The target CS (CSA) was extinguished alone followed by compound presentations of the extinguished CSA and nonextinguished CSB. Recovery of conditioned skin conductance responses to CSA was reduced 24 h after compound extinction, as compared with a group who received an equal number of extinction trials to the CSA alone. PMID:26572649

  8. Evaluating the temporal link between Siberian Traps magmatism and the end-Permian mass extinction (Invited)

    Science.gov (United States)

    Burgess, S. D.; Bowring, S. A.

    2013-12-01

    Interest in Large Igneous Provinces as agents for massive climatic and biological change is steadily increasing, though the temporal constraints on both are seldom precise enough to allow detailed testing of a causal relationship. The end-Permian mass extinction is one of the most biologically important and intensely studied events in Earth history and has been linked to many possible trigger mechanisms, from voluminous volcanism to bolide impact. Proposed kill mechanisms range from acidic and/or anoxic oceans to a cocktail of toxic gases, although the link between trigger and kill mechanisms is unconstrained due to the lack of a high-precision timeline. Critical to assessing the plausibility of different trigger and kill mechanisms is an accurate age model for the biotic crisis and the perturbations to the global carbon cycle and ocean chemistry. Recent work using the EARTHTIME U/Pb tracer solution has refined the timing of the onset and duration of the marine mass extinction event and the earliest Triassic recovery at the GSSP for the Permian-Triassic boundary in Meishan, China. This work constrains the mass extinction duration to less than 100 kyr and provides an accurate and precise time point for the onset of extinction, against which the timing of potential trigger mechanisms may be compared. For more than two decades, eruption and emplacement of the Siberian traps has been implicated as a potential trigger of the end-Permian extinction. In this scenario, magmatism drives the biotic crisis through mobilization of volatiles from the sedimentary rock with which intruding and erupting magmas interact. Massive volatile release is believed to trigger major changes in atmospheric chemistry and temperature, both of which have been proposed as kill mechanisms. Current temporal constrains on the timing and duration of the Siberian magmatism are an order of magnitude less precise than those for the mass extinction event and associated environmental perturbations

  9. Visuomotor links in awareness: evidence from extinction.

    Science.gov (United States)

    Ricci, Raffaella; Genero, Rosanna; Colombatti, Simona; Zampieri, Daniela; Chatterjee, Anjan

    2005-05-31

    In patients with extinction, ipsilesional stimuli may abolish awareness of contralesional stimuli. Explanations of extinction often assume a serial model of processing in which sensory competition and identification precedes the selection of responses. We tested the adequacy of this assumption by examining the effects of response variables on visual awareness in six patients using signal detection analysis. Ipsilesional stimuli modulated patients' response criteria in deciding whether a contralesional stimulus was a target, and response modality (verbal or motor) modulated patients' abilities to discriminate between contralesional targets and distractors. This pattern of input variables modulating response criteria and output variables modulating discriminability indicates the extent to which attentional and intentional systems are tightly intertwined, with bi-directional effects in producing visual awareness.

  10. Taste-immunosuppression engram: reinforcement and extinction.

    Science.gov (United States)

    Niemi, Maj-Britt; Härting, Margarete; Kou, Wei; Del Rey, Adriana; Besedovsky, Hugo O; Schedlowski, Manfred; Pacheco-López, Gustavo

    2007-08-01

    Several Pavlovian conditioning paradigms have documented the brain's abilities to sense immune-derived signals or immune status, associate them with concurrently relevant extereoceptive stimuli, and reinstate such immune responses on demand. Specifically, the naturalistic relation of food ingestion with its possible immune consequences facilitates taste-immune associations. Here we demonstrate that the saccharin taste can be associated with the immunosuppressive agent cyclosporine A, and that such taste-immune associative learning is subject to reinforcement. Furthermore, once consolidated, this saccharin-immunosuppression engram is resistant to extinction when avoidance behavior is assessed. More importantly, the more this engram is activated, either at association or extinction phases, the more pronounced is the conditioned immunosuppression.

  11. Causes of the great mass extinction of marine organisms in the Late Devonian

    Science.gov (United States)

    Barash, M. S.

    2016-11-01

    The second of the five great mass extinctions of the Phanerozoic occurred in the Late Devonian. The number of species decreased by 70-82%. Major crises occurred at the Frasnian-Famennian and Devonian-Carboniferous boundary. The lithological and geochemical compositions of sediments, volcanic deposits, impactites, carbon and oxygen isotope ratios, evidence of climate variability, and sea level changes reflect the processes that led the critical conditions. Critical intervals are marked by layers of black shales, which were deposited in euxinic or anoxic environments. These conditions were the main direct causes of the extinctions. The Late Devonian mass extinction was determined by a combination of impact events and extensive volcanism. They produced similar effects: emissions of harmful chemical compounds and aerosols to cause greenhouse warming; darkening of the atmosphere, which prevented photosynthesis; and stagnation of oceans and development of anoxia. Food chains collapsed and biological productivity decreased. As a result, all vital processes were disturbed and a large portion of the biota became extinct.

  12. PACAP modulates the consolidation and extinction of the contextual fear conditioning through NMDA receptors.

    Science.gov (United States)

    Schmidt, S D; Myskiw, J C; Furini, C R G; Schmidt, B E; Cavalcante, L E; Izquierdo, I

    2015-02-01

    Pituitary adenylate cyclase-activating polypeptide (PACAP) has a broad spectrum of biological functions including neurotransmitter, neurotrophic and neuroprotective. Moreover, it has been suggested that PACAP plays a role in the modulation of learning and memory as well as on the modulation of glutamate signaling. Thus, in the current study we investigated in the CA1 region of hippocampus and in the basolateral amygdala (BLA) the role of PACAP in the consolidation and extinction of contextual fear conditioning (CFC) and the interaction between PACAP and NMDA receptors. Male rats with cannulae implanted in the CA1 region of the hippocampus or in the BLA received immediately after the training or extinction training of the CFC infusions of the Vehicle, PACAP-38 (40 pg/side), PACAP 6-38 (40 pg/side) or PACAP 6-38 plus D-serine (50 μg/side). After 24h, the animals were subjected to a 3-min retention test. The results indicated that in the CA1 region of hippocampus, PACAP participates in the consolidation and extinction of the CFC, and in the BLA, PACAP participates only in the consolidation of the CFC. Additionally, the results suggest that the action of PACAP on the consolidation and extinction of the CFC is mediated by the glutamate NMDA receptors.

  13. Determining species expansion and extinction possibilities using probabilistic and graphical models

    Directory of Open Access Journals (Sweden)

    Chaturvedi Rajesh

    2015-03-01

    Full Text Available Survival of plant species is governed by a number of functions. The participation of each function in species survival and the impact of the contrary behaviour of the species vary from function to function. The probability of extinction of species varies in all such scenarios and has to be calculated separately. Secondly, species follow different patterns of dispersal and localisation at different stages of occupancy state of the site, therefore, the scenarios of competition for resources with climatic shifts leading to deterioration and loss of biodiversity resulting in extinction needs to be studied. Furthermore, most possible deviations of species from climax community states needs to be calculated before species become extinct due to sudden environmental disruption. Globally, various types of anthropogenic disturbances threaten the diversity of biological systems. The impact of these anthropogenic activities needs to be analysed to identify extinction patterns with respect to these activities. All the analyses mentioned above have been tried to be achieved through probabilistic or graphical models in this study.

  14. Cannabinoid facilitation of fear extinction memory recall in humans

    Science.gov (United States)

    Rabinak, Christine A.; Angstadt, Mike; Sripada, Chandra S.; Abelson, James L.; Liberzon, Israel; Milad, Mohammed R.; Phan, K. Luan

    2012-01-01

    A first-line approach to treat anxiety disorders is exposure-based therapy, which relies on extinction processes such as repeatedly exposing the patient to stimuli (conditioned stimuli; CS) associated with the traumatic, fear-related memory. However, a significant number of patients fail to maintain their gains, partly attributed to the fact that this inhibitory learning and its maintenance is temporary and conditioned fear responses can return. Animal studies have shown that activation of the cannabinoid system during extinction learning enhances fear extinction and its retention. Specifically, CB1 receptor agonists, such as Δ9-tetrahydrocannibinol (THC), can facilitate extinction recall by preventing recovery of extinguished fear in rats. However, this phenomenon has not been investigated in humans. We conducted a study using a randomized, double-blind, placebo-controlled, between-subjects design, coupling a standard Pavlovian fear extinction paradigm and simultaneous skin conductance response (SCR) recording with an acute pharmacological challenge with oral dronabinol (synthetic THC) or placebo (PBO) 2 hours prior to extinction learning in 29 healthy adult volunteers (THC = 14; PBO = 15) and tested extinction retention 24 hours after extinction learning. Compared to subjects that received PBO, subjects that received THC showed low SCR to a previously extinguished CS when extinction memory recall was tested 24 hours after extinction learning, suggesting that THC prevented the recovery of fear. These results provide the first evidence that pharmacological enhancement of extinction learning is feasible in humans using cannabinoid system modulators, which may thus warrant further development and clinical testing. PMID:22796109

  15. Role of the hippocampus in contextual modulation of fear extinction

    Institute of Scientific and Technical Information of China (English)

    Lingzhi Kong; Xihong Wu; Liang Li

    2008-01-01

    Fear extinction is an important form of emotional learning, and affects neural plasticity. Cue fear extinction is a classical form of inhibitory learning that can be used as an exposure-based treatment for phobia, because the long-term extinction memory produced during cue fear extinction can limit the over-expression of fear. The expression of this inhibitory memory partly depends on the context in which the extinction learning occurs. Studies such as transient inhibition, electrophysiology and brain imaging have proved that the hippocampus - an important structure in the limbic system - facilitates memory retrieval by contextual cues.Mediation of the hippocampus-medial prefrontal lobe circuit may be the neurobiological basis of this process.This article has reviewed the role of the hippocampus in the learning and retrieval of fear extinction.Contextual modulation of fear extinction may rely on a neural network consisting of the hippocampus, the medial prefrontal cortex and the amygdala.

  16. Dynamics of extinction debt across five taxonomic groups.

    Science.gov (United States)

    Halley, John M; Monokrousos, Nikolaos; Mazaris, Antonios D; Newmark, William D; Vokou, Despoina

    2016-07-25

    Species extinction following habitat loss is well documented. However, these extinctions do not happen immediately. The biodiversity surplus (extinction debt) declines with some delay through the process of relaxation. Estimating the time constants of relaxation, mainly the expected time to first extinction and the commonly used time for half the extinction debt to be paid off (half-life), is crucial for conservation purposes. Currently, there is no agreement on the rate of relaxation and the factors that it depends on. Here we find that half-life increases with area for all groups examined in a large meta-analysis of extinction data. A common pattern emerges if we use average number of individuals per species before habitat loss as an area index: for mammals, birds, reptiles and plants, the relationship has an exponent close to a half. We also find that the time to first determined extinction is short and increases slowly with area.

  17. Extinction and dust properties in a clumpy medium

    CERN Document Server

    Scicluna, P

    2015-01-01

    (abridged) The dust content of the universe is primarily explored via its interaction with stellar photons, producing interstellar extinction. However, owing to the physical extension of the observing beam, observations may detect scattered photons, resulting in a change in the observed (or effective) extinction, depending on the spatial distribution of the dust and the resolution of the instrument. We investigate the influence of clumpy dust distributions on effective extinction toward embedded sources and those in the diffuse ISM. We use Monte Carlo radiative transfer to examine effective extinction for various geometries. By varying the number, optical depth and volume-filling factor of clumps in models of spherical shells and the diffuse ISM, we explore the evolution of extinction. Depending on the number of scattering events in the beam, the extinction curve steepens in homogeneous media and flattens in clumpy media. As a result, clumpy dust distributions can to reproduce extinction curves with arbitrary...

  18. Effects of broken affordance on visual extinction.

    Science.gov (United States)

    Wulff, Melanie; Humphreys, Glyn W

    2015-01-01

    Previous studies have shown that visual extinction can be reduced if two objects are positioned to "afford" an action. Here we tested if this affordance effect was disrupted by "breaking" the affordance, i.e., if one of the objects actively used in the action had a broken handle. We assessed the effects of broken affordance on recovery from extinction in eight patients with right hemisphere lesions and left-sided extinction. Patients viewed object pairs that were or were not commonly used together and that were positioned for left- or right-hand actions. In the unrelated pair conditions, either two tools or two objects were presented. In line with previous research (e.g., Riddoch et al., 2006), extinction was reduced when action-related object pairs and when unrelated tool pairs were presented compared to unrelated object pairs. There was no significant difference in recovery rate between action-related (object-tool) and unrelated tool pairs. In addition, performance with action-related objects decreased when the tool appeared on the ipsilesional side compared to when it was on the contralesional side, but only when the tool handle was intact. There were minimal effects of breaking the handle of an object rather than a tool, and there was no effect of breaking the handle on either tools or objects on single item trials. The data suggest that breaking the handle of a tool lessens the degree to which it captures attention, with this attentional capture being strongest when the tool appears on the ipsilesional side. The capture of attention by the ipsilesional item then reduces the chance of detecting the contralesional stimulus. This attentional capture effect is mediated by the affordance to the intact tool.

  19. Effects of broken affordance on visual extinction

    Directory of Open Access Journals (Sweden)

    Melanie eWulff

    2015-09-01

    Full Text Available Previous studies have shown that visual extinction can be reduced if two objects are positioned to afford an action. Here we tested if this affordance effect was disrupted by breaking the affordance – if one of the objects actively used in the action had a broken handle. We assessed the effects of broken affordance on recovery from extinction in eight patients with right hemisphere lesions and left-sided extinction. Patients viewed object pairs that were or were not commonly used together and that were positioned for left- or right-hand actions. In the unrelated pair conditions, either two tools or two objects were presented. In line with previous research (e.g., Riddoch et al., 2006, extinction was reduced when action-related object pairs and when unrelated tool pairs were presented compared to unrelated object pairs. There was no significant difference in recovery rate between action-related (object-tool and unrelated tool-tool pairs. In addition, performance with action-related objects decreased when the tool appeared on the ipsilesional side compared to when it was on the contralesional side, but only when the tool handle was intact. There were minimal effects of breaking the handle of an object rather than a tool, and there was no effect of breaking the handle on either tools or objects on single item trials. The data suggest that breaking the handle of a tool lessens the degree to which it captures attention, with this attentional capture being strongest when the tool appears on the ipsilesional side. The capture of attention by the ipsilesional item then reduces the chance of detecting the contralesional stimulus. This attentional capture effect is mediated by the affordance to the intact tool.

  20. Rewinding the process of mammalian extinction

    OpenAIRE

    Saragusty, J.; Diecke, S.; Drukker, M.; Durrant, B.; Friedrich Ben-Nun, I.; Galli, C; Goeritz, F.; Hayashi, K; Hermes, R.; Holtze, S.; Johnson, S.; Lazzari, G.; Loi, P; Loring, J. F.; Okita, K

    2016-01-01

    With only three living individuals left on this planet, the northern white rhinoceros (Ceratotherium simum cottoni) could be considered doomed for extinction. It might still be possible, however, to rescue the (sub)species by combining novel stem cell and assisted reproductive technologies. To discuss the various practical options available to us, we convened a multidisciplinary meeting under the name "Conservation by Cellular Technologies." The outcome of this meeting and the proposed road m...

  1. Modelling dust extinction in the Magellanic Clouds

    CERN Document Server

    Zonca, Alberto; Mulas, Giacomo; Aresu, Giambattista; Cecchi-Pestellini, Cesare

    2015-01-01

    We model the extinction profiles observed in the Small and Large Magellanic clouds with a synthetic population of dust grains consisting by core-mantle particles and a collection of free-flying polycyclic aromatic hydrocarbons. All different flavors of the extinction curves observed in the Magellanic Clouds can be described by the present model, that has been previously (successfully) applied to a large sample of diffuse and translucent lines of sight in the Milky Way. We find that in the Magellanic Clouds the extinction produced by classic grains is generally larger than absorption by polycyclic aromatic hydrocarbons. Within this model, the non-linear far-UV rise is accounted for by polycyclic aromatic hydrocarbons, whose presence in turn is always associated to a gap in the size distribution of classical particles. This hints either a physical connection between (e.g., a common cause for) polycyclic aromatic hydrocarbons and the absence of middle-sized dust particles, or the need for an additional component...

  2. Resurrecting extinct interactions with extant substitutes.

    Science.gov (United States)

    Griffiths, Christine J; Hansen, Dennis M; Jones, Carl G; Zuël, Nicolas; Harris, Stephen

    2011-05-10

    There is increasing evidence that restoration ecologists should be most concerned with restoring species interactions rather than species diversity per se [1]. Rewilding with taxon substitutes, the intentional introduction of exotic species to replace the ecosystem functions of recently extinct species, is one way to reverse ecosystem dysfunction following the loss of species interactions [2]. This is highly controversial [3], in part because of a lack of rigorous scientific studies [4]. Here we present the first empirical evidence of an in situ rewilding project undertaken as a hypothesis-driven ecosystem management option. On Ile aux Aigrettes, a 25-hectare island off Mauritius, the critically endangered large-fruited endemic ebony, Diospyros egrettarum (Ebenaceae), was seed-dispersal limited after the extinction of all native large-bodied frugivores, including giant tortoises. We introduced exotic Aldabra giant tortoises, Aldabrachelys gigantea, to disperse the ebony seeds. Not only did the tortoises ingest the large fruits and disperse substantial numbers of ebony seeds, but tortoise gut passage also improved seed germination, leading to the widespread, successful establishment of new ebony seedlings. Our results demonstrate that the introduction of these exotic frugivores is aiding the recovery of ebonies. We argue for more reversible rewilding experiments to investigate whether extinct species interactions can be restored.

  3. Glucocorticoids enhance extinction-based psychotherapy.

    Science.gov (United States)

    de Quervain, Dominique J-F; Bentz, Dorothée; Michael, Tanja; Bolt, Olivia C; Wiederhold, Brenda K; Margraf, Jürgen; Wilhelm, Frank H

    2011-04-19

    Behavioral exposure therapy of anxiety disorders is believed to rely on fear extinction. Because preclinical studies have shown that glucocorticoids can promote extinction processes, we aimed at investigating whether the administration of these hormones might be useful in enhancing exposure therapy. In a randomized, double-blind, placebo-controlled study, 40 patients with specific phobia for heights were treated with three sessions of exposure therapy using virtual reality exposure to heights. Cortisol (20 mg) or placebo was administered orally 1 h before each of the treatment sessions. Subjects returned for a posttreatment assessment 3-5 d after the last treatment session and for a follow-up assessment after 1 mo. Adding cortisol to exposure therapy resulted in a significantly greater reduction in fear of heights as measured with the acrophobia questionnaire (AQ) both at posttreatment and at follow-up, compared with placebo. Furthermore, subjects receiving cortisol showed a significantly greater reduction in acute anxiety during virtual exposure to a phobic situation at posttreatment and a significantly smaller exposure-induced increase in skin conductance level at follow-up. The present findings indicate that the administration of cortisol can enhance extinction-based psychotherapy.

  4. Minimizing extinction risk through genetic rescue

    Directory of Open Access Journals (Sweden)

    Waite, T. A.

    2005-12-01

    Full Text Available According to the genetic rescue hypothesis, immigrants can improve population persistence through their genetic contribution alone. We investigate the potential for such rescue using small, inbred laboratory populations of the bean beetle (Callosobruchus maculatus. We ask how many migrants per generation (MPG are needed to minimize the genetic component of extinction risk. During Phase 1, population size was made to fluctuate between 6 and 60 (for 10 generations. During this phase, we manipulated the number of MPG, replacing 0, 1, 3, or 5 females every generation with immigrant females. During Phase 2, we simply set an upper limit on population size (.10. Compared with the 0-MPG treatment, the other treatments were equivalently effective at improving reproductive success and reducing extinction risk. A single MPG was sufficient for genetic rescue, apparently because effective migration rate was inflated dramatically during generations when population size was small. An analysis of quasi-extinction suggests that replicate populations in the 1-MPG treatment benefited from initial purging of inbreeding depression. Populations in this treatment performed so well apparently because they received the dual benefit of purging followed by genetic infusion. Our results suggest the need for further evaluation of alternative schemes for genetic rescue.

  5. Dust properties along anomalous extinction sightlines. II. Studying extinction curves with dust models

    CERN Document Server

    Mazzei, Paola

    2010-01-01

    The large majority of extinction sight lines in our Galaxy obey a simple relation depending on one parameter, the total-to-selective extinction coefficient, Rv. Different values of Rv are able to match the whole extinction curve through different environments so characterizing normal extinction curves. In this paper more than sixty curves with large ultraviolet deviations from their best-fit one parameter curve are analyzed. These curves are fitted with dust models to shed light into the properties of the grains, the processes affecting them, and their relations with the environmental characteristics. The extinction curve models are reckoned by following recent prescriptions on grain size distributions able to describe one parameter curves for Rv values from 3.1 to 5.5. Such models, here extended down to Rv=2.0, allow us to compare the resulting properties of our deviating curves with the same as normal curves in a self-consistent framework, and thus to recover the relative trends overcoming the modeling unce...

  6. Extinction of chained instrumental behaviors: Effects of procurement extinction on consumption responding.

    Science.gov (United States)

    Thrailkill, Eric A; Bouton, Mark E

    2015-07-01

    Instrumental behavior often consists of sequences or chains of responses that minimally include procurement behaviors that enable subsequent consumption behaviors. In such chains, behavioral units are linked by access to one another and eventually to a primary reinforcer, such as food or a drug. The present experiments examined the effects of extinguishing procurement responding on consumption responding after training of a discriminated heterogeneous instrumental chain. Rats learned to make a procurement response (e.g., pressing a lever) in the presence of a distinctive discriminative stimulus; making that response led to the presentation of a second discriminative stimulus that set the occasion for a consumption response (e.g., pulling a chain), which then produced a food-pellet reinforcer. Experiment 1 showed that extinction of either the full procurement-consumption chain or procurement alone weakened the consumption response tested in isolation. Experiment 2 replicated the procurement extinction effect and further demonstrated that the opportunity to make the procurement response, as opposed to simple exposure to the procurement stimulus alone, was required. In Experiment 3, rats learned 2 distinct discriminated heterogeneous chains; extinction of 1 procurement response specifically weakened the consumption response that had been associated with it. The results suggest that learning to inhibit the procurement response may produce extinction of consumption responding through mediated extinction. The experiments suggest the importance of an associative analysis of instrumental behavior chains. (PsycINFO Database Record

  7. A window of vulnerability: impaired fear extinction in adolescence.

    Science.gov (United States)

    Baker, Kathryn D; Den, Miriam L; Graham, Bronwyn M; Richardson, Rick

    2014-09-01

    There have been significant advances made towards understanding the processes mediating extinction of learned fear. However, despite being of clear theoretical and clinical significance, very few studies have examined fear extinction in adolescence, which is often described as a developmental window of vulnerability to psychological disorders. This paper reviews the relatively small body of research examining fear extinction in adolescence. A prominent finding of this work is that adolescents, both humans and rodents, exhibit a marked impairment in extinction relative to both younger (e.g., juvenile) and older (e.g., adult) groups. We then review some potential mechanisms that could produce the striking extinction deficit observed in adolescence. For example, one neurobiological candidate mechanism for impaired extinction in adolescence involves changes in the functional connectivity within the fear extinction circuit, particularly between prefrontal cortical regions and the amygdala. In addition, we review research on emotion regulation and attention processes that suggests that developmental changes in attention bias to threatening cues may be a cognitive mechanism that mediates age-related differences in extinction learning. We also examine how a differential reaction to chronic stress in adolescence impacts upon extinction retention during adolescence as well as in later life. Finally, we consider the findings of several studies illustrating promising approaches that overcome the typically-observed extinction impairments in adolescent rodents and that could be translated to human adolescents.

  8. Cortisol modifies extinction learning of recently acquired fear in men.

    Science.gov (United States)

    Merz, Christian Josef; Hermann, Andrea; Stark, Rudolf; Wolf, Oliver Tobias

    2014-09-01

    Exposure therapy builds on the mechanism of fear extinction leading to decreased fear responses. How the stress hormone cortisol affects brain regions involved in fear extinction in humans is unknown. For this reason, we tested 32 men randomly assigned to receive either 30 mg hydrocortisone or placebo 45 min before fear extinction. In fear acquisition, a picture of a geometrical figure was either partially paired (conditioned stimulus; CS+) or not paired (CS-) with an electrical stimulation (unconditioned stimulus; UCS). In fear extinction, each CS was presented again, but no UCS occurred. Cortisol increased conditioned skin conductance responses in early and late extinction. In early extinction, higher activation towards the CS- than to the CS+ was found in the amygdala, hippocampus and posterior parahippocampal gyrus. This pattern might be associated with the establishment of a new memory trace. In late extinction, the placebo compared with the cortisol group displayed enhanced CS+/CS- differentiation in the amygdala, medial frontal cortex and nucleus accumbens. A change from early deactivation to late activation of the extinction circuit as seen in the placebo group seems to be needed to enhance extinction and to reduce fear. Cortisol appears to interfere with this process thereby impairing extinction of recently acquired conditioned fear.

  9. Quantifying the threat of extinction from Muller's ratchet in the diploid Amazon molly (Poecilia formosa

    Directory of Open Access Journals (Sweden)

    Loewe Laurence

    2008-03-01

    Full Text Available Abstract Background The Amazon molly (Poecilia formosa is a small unisexual fish that has been suspected of being threatened by extinction from the stochastic accumulation of slightly deleterious mutations that is caused by Muller's ratchet in non-recombining populations. However, no detailed quantification of the extent of this threat is available. Results Here we quantify genomic decay in this fish by using a simple model of Muller's ratchet with the most realistic parameter combinations available employing the evolution@home global computing system. We also describe simple extensions of the standard model of Muller's ratchet that allow us to deal with selfing diploids, triploids and mitotic recombination. We show that Muller's ratchet creates a threat of extinction for the Amazon molly for many biologically realistic parameter combinations. In most cases, extinction is expected to occur within a time frame that is less than previous estimates of the age of the species, leading to a genomic decay paradox. Conclusion How then does the Amazon molly survive? Several biological processes could individually or in combination solve this genomic decay paradox, including paternal leakage of undamaged DNA from sexual sister species, compensatory mutations and many others. More research is needed to quantify the contribution of these potential solutions towards the survival of the Amazon molly and other (ancient asexual species.

  10. Community stability and selective extinction during the Permian-Triassic mass extinction

    Science.gov (United States)

    Roopnarine, Peter D.; Angielczyk, Kenneth D.

    2015-10-01

    The fossil record contains exemplars of extreme biodiversity crises. Here, we examined the stability of terrestrial paleocommunities from South Africa during Earth's most severe mass extinction, the Permian-Triassic. We show that stability depended critically on functional diversity and patterns of guild interaction, regardless of species richness. Paleocommunities exhibited less transient instability—relative to model communities with alternative community organization—and significantly greater probabilities of being locally stable during the mass extinction. Functional patterns that have evolved during an ecosystem's history support significantly more stable communities than hypothetical alternatives.

  11. Earth history. U-Pb geochronology of the Deccan Traps and relation to the end-Cretaceous mass extinction.

    Science.gov (United States)

    Schoene, Blair; Samperton, Kyle M; Eddy, Michael P; Keller, Gerta; Adatte, Thierry; Bowring, Samuel A; Khadri, Syed F R; Gertsch, Brian

    2015-01-09

    The Chicxulub asteroid impact (Mexico) and the eruption of the massive Deccan volcanic province (India) are two proposed causes of the end-Cretaceous mass extinction, which includes the demise of nonavian dinosaurs. Despite widespread acceptance of the impact hypothesis, the lack of a high-resolution eruption timeline for the Deccan basalts has prevented full assessment of their relationship to the mass extinction. Here we apply uranium-lead (U-Pb) zircon geochronology to Deccan rocks and show that the main phase of eruptions initiated ~250,000 years before the Cretaceous-Paleogene boundary and that >1.1 million cubic kilometers of basalt erupted in ~750,000 years. Our results are consistent with the hypothesis that the Deccan Traps contributed to the latest Cretaceous environmental change and biologic turnover that culminated in the marine and terrestrial mass extinctions.

  12. Large Igneous Province Volcanism, Ocean Anoxia and Marine Mass Extinction

    DEFF Research Database (Denmark)

    Ruhl, Micha; Bjerrum, Christian J.; Canfield, Donald

    2013-01-01

    Past global marine mass extinction events are often linked to terrestrial Large Igneous Province (LIP) volcanism, but exact mechanisms driving extinction are often not well constrained. We studied two of Earth’s largest mass extinction events, at the Triassic-Jurassic (~201.4 Ma) and Permian......-Triassic (~252 Ma) boundaries, which coincide with Central Atlantic Magmatic Province (CAMP) and Siberian Trap volcanism, respectively. The Triassic-Jurassic mass extinction is often contributed to carbon release driven ocean acidification while the Permian-Triassic mass extinction is suggested to be related...... to widespread ocean anoxia. We compare Permian-Triassic and Triassic-Jurassic ocean redox change along continental margins in different geographic regions (Permian-Triassic: Greenland, Svalbard, Iran; Triassic-Jurassic: UK, Austria) and discuss its role in marine mass extinction. Speciation of iron [(FeHR/ Fe...

  13. Chemical antipredator defence is linked to higher extinction risk

    Science.gov (United States)

    2016-01-01

    Many attributes of species may be linked to contemporary extinction risk, though some such traits remain untested despite suggestions that they may be important. Here, I test whether a trait associated with higher background extinction rates, chemical antipredator defence, is also associated with current extinction risk, using amphibians as a model system—a group facing global population declines. I find that chemically defended species are approximately 60% more likely to be threatened than species without chemical defence, although the severity of the contemporary extinction risk may not relate to chemical defence. The results confirm that background and contemporary extinction rates can be predicted from the same traits, at least in certain cases. This suggests that associations between extinction risk and phenotypic traits can be temporally stable over long periods. The results also provide novel insights into the relevance of antipredator defences for species subject to conservation concerns. PMID:28018657

  14. [GABA-Receptors in Modulation of Fear Memory Extinction].

    Science.gov (United States)

    Dubrovina, N I

    2016-01-01

    GABA is the major inhibitory neurotransmitter in the central nervous system determining the efficacy of neuronal interaction. GABA-receptors play a key role in different aspects of fear memory--acquisition and consolidation, retention, reconsolidation and extinction. Extinction is an important behavioural phenomenon which allows organism to adapt its behavior to a changing environment. Extinction of fear memory is a form of new inhibitory learning which interferes with expression of the initial acquired fear conditioning. Resistance to extinction is symptom of depression and posttraumatic stress disorder. The aim of the present review was to summarize own and literary data about GABAergic modulation of fear extinction and pharmacological correction of extinction impairment at influences on GABA(A)- and GABA(B)- receptors.

  15. Modeling Extinction Risk of Endemic Birds of Mainland China

    Directory of Open Access Journals (Sweden)

    Youhua Chen

    2013-01-01

    Full Text Available The extinction risk of endemic birds of mainland China was modeled over evolutionary time. Results showed that extinction risk of endemic birds in mainland China always tended to be similar within subclades over the evolutionary time of species divergence, and the overall evolution of extinction risk of species presented a conservatism pattern, as evidenced by the disparity-through-time plot. A constant-rate evolutionary model was the best one to quantify the evolution of extinction risk of endemic birds of mainland China. Thus, there was no rate shifting pattern for the evolution of extinction risk of Chinese endemic birds over time. In a summary, extinction risk of endemic birds of mainland China is systematically quantified under the evolutionary framework in the present work.

  16. Extinct 244Pu in Ancient Zircons

    Science.gov (United States)

    Turner, Grenville; Harrison, T. Mark; Holland, Greg; Mojzsis, Stephen J.; Gilmour, Jamie

    2004-10-01

    We have found evidence, in the form of fissiogenic xenon isotopes, for in situ decay of 244Pu in individual 4.1- to 4.2-billion-year-old zircons from the Jack Hills region of Western Australia. Because of its short half-life, 82 million years, 244Pu was extinct within 600 million years of Earth's formation. Detrital zircons are the only known relics to have survived from this period, and a study of their Pu geochemistry will allow us to date ancient metamorphic events and determine the terrestrial Pu/U ratio for comparison with the solar ratio.

  17. Gray Extinction in the Orion Trapezium

    Science.gov (United States)

    Krełowski, J.; Galazutdinov, G. A.; Strobel, A.; Mulas, G.

    2016-12-01

    We estimated distances to several Orion Trapezium stars using our CaII-method and confirm the distance recommended by Menten et al. However, we found that in the case of HD 37020 both individual distances (based on the trigonometric VLBI parallax and/or CaII-method) differ from the spectrophotometric distance by a factor of 2.5. We interpret this fact as a result of presence of gray (neutral) extinction of about 1.8 mag in front of this star. The correctness of the applied spectral type/ luminosity class, Sp/L, (based on new original spectra from HARPS-N) and measurements of color indices is discussed.

  18. Late Devonian red tide and mass extinction

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Molecular stratigraphical, carbonate carbon isotopic, stratigraphical and paleontological data show that algal booming, eutrophication, anoxia, hypersalinity, positive ( 13C excursion and biomass decreasing occurred in the offshore carbonate environments of the Frasnian-Famennian (F-F) transition, which hints that red tide might frequently take place in the F-F transition of Guangxi, South China. We suggest that the mass extinction of the reef ecosystems and the shallow-water marine organisms in the F-F transition of the lower-middle latitudes may be related to the frequent occurrence of red tide in that time.

  19. Mass Extinctions and a Dark Disk

    CERN Document Server

    Kramer, Eric David

    2016-01-01

    We consider whether the observed periodicity of mass extinctions and of comet impacts on Earth is consistent with Solar oscillation about the Galactic midplane and spiral arm crossings. It is of further interest to determine whether a hypothetical thin dark disk is necessary to give the right periodicity, and whether such a dark disk is allowed given kinematic and other observational constaints on the Galaxy's gravitational potential. We show that a dark disk consistent with recent bounds, combined with data for spiral arm crossing, can lead to the required periodicity. Moreover, we find that the best fit values correctly predict the date of the Chicxulub crater dated to 66 My ago.

  20. Biogeochemical evidence for euxinic oceans and ecological disturbance presaging the end-Permian mass extinction event

    Science.gov (United States)

    Cao, Changqun; Love, Gordon D.; Hays, Lindsay E.; Wang, Wei; Shen, Shuzhong; Summons, Roger E.

    2009-05-01

    The Permian-Triassic Boundary event at 252.2 Ma marks the largest extinction of marine fauna in the Phanerozoic and there is a wide consensus that the extinction coincided with an intense oceanic anoxic event. The stratotype of the Changhsingian Stage, precisely constrained by the PTB Global Stratotype Section and Point (GSSP) and the GSSP for the Wuchiapingian-Changhsingian Boundary, both at Meishan in southern China, is well-documented in respect to geochronology and the pattern of extinction. Here we report secular trends in bulk isotopic parameters and lipid biomarkers in a core spanning 214 m of stratigraphic section across the PTB and through the entire Changhsingian interval. Our analysis of these data, viewed in the context of relative sea level change and strontium isotopes, reveals distinct shifts in paleoenvironmental conditions and profound changes in plankton ecology well before and following the biological extinction event. Specifically, patterns of steroids and triterpenoids indicate a marine plankton community that was heavily dominated by bacteria during the late Wuchiapingian, middle Changhsingian and early Griesbachian stages. Secular trends in aromatic hydrocarbons diagnostic for anoxygenic green sulphur bacteria (Chlorobiaceae) identify periods when euxinic conditions extended into the photic zone during the entire Changhsingian stage. Here also, the δ15N of organic nitrogen progressively shifted from positive values around + 2 or + 3‰ to - 1‰ coincident with a sharp negative excursion in δ13C org and slightly postdating the sharp minimum in δ13C values of inorganic carbon that occurs at the top of Bed 24. These results, together the published chronology indicate that conditions unfavourable for aerobiosis existed in the marine photic zone at Meishan for 1.5 million years prior to the main phase of the biological extinction. The induction of marine euxinic conditions, worldwide, at the end of the Permian was likely a consequence of the

  1. Effects of overtraining on extinction in newts (Cynops pyrrhogaster)

    OpenAIRE

    Shibasaki, Masahiro; ISHIDA, Masato

    2012-01-01

    The overtraining extinction effect (OEE), a phenomenon in which extended training facilitates extinction, has been found in mammals and reptiles. However, fish have never shown OEE. No study has yet investigated OEE in newts, a representative amphibian species. We tested whether newts, Cynops pyrrhogaster, show OEE in a straight-array task. All animals received five trials per day and were given a piece of dried worm during reinforced trials. They showed significant acquisition and extinction...

  2. The Effect of Size and Ecology on Extinction Susceptibility

    Science.gov (United States)

    Huynh, C.; Yuan, A.; Heim, N.; Payne, J.

    2015-12-01

    Although life on Earth first emerged as prokaryotic organisms, it eventually evolved into billions of different species. However, extinctions on Earth, especially the five mass extinctions, have decimated species. So what leads to a species survival or demise during a mass extinction? Are certain species more susceptible to extinctions based on their size and ecology? For this project, we focused on the data of marine animals. To examine the impact of size and ecology on a species's likelihood of survival, we compared the sizes and ecologies of the survivors and victims of the five mass extinctions. The ecology, or life mode, of a genus consists of the combination of tiering, motility, and feeding mechanism. Tiering refers to the animal's typical location in the water column and sediments, motility refers to its ability to move, and feeding mechanism describes the way the organism eats; together, they describe the animal's behavior. We analyzed the effect of ecology on survival using logistic regression, which compares life mode to the success or failure of a genus during each mass extinction interval. For organism size, we found the extinct organisms' mean size (both volume and length) and compared it with the average size of survivors on a graph. Our results show that while surviving genera of mass extinctions tended to be slightly larger than those that went extinct, there was no significant difference. Even though the Permian (Changhsingian) and Triassic (Rhaetian) extinctions had larger surviving species, likewise the difference was small. Ecology had a more obvious impact on the likelihood of survival; fast-moving, predatory pelagic organisms were the most likely to go extinct, while sedentary, infaunal suspension feeders had the greatest chances of survival. Overall, ecology played a greater role than size in determining the survival of a species. With this information, we can use ecology to predict which species would survive future extinctions.

  3. The risk of extinction - the mutational meltdown or the overpopulation

    OpenAIRE

    Malarz, K.

    2006-01-01

    The phase diagrams survival-extinction for the Penna model with parameters: (mutations rate)-(birth rate), (mutation rate)-(harmful mutations threshold), (harmful mutation threshold)-(minimal reproduction age) are presented. The extinction phase may be caused by either mutational meltdown or overpopulation. When the Verhulst factor is responsible for removing only newly born babies and does not act on adults the overpopulation is avoided and only genetic factors may lead to species extinction.

  4. Evaluating the presence versus absence of the reinforcer during extinction.

    Science.gov (United States)

    Castillo, Mariana I; Borrero, John C; Mendres-Smith, Amber E

    2014-01-01

    The purpose of this study was to assess the effects of extinction when the reinforcer was present versus absent. These effects were examined with 2 human operant procedures (i.e., a computer program and a mechanical apparatus) with college students as participants. Discriminable properties of the apparatus appeared to influence responding during extinction. In general, responding during extinction was less likely with the mechanical apparatus when the reinforcer was absent and more likely with the computer program.

  5. Extinction and dust properties in a clumpy medium

    OpenAIRE

    Scicluna, P.; Siebenmorgen, R.

    2015-01-01

    (abridged) The dust content of the universe is primarily explored via its interaction with stellar photons, producing interstellar extinction. However, owing to the physical extension of the observing beam, observations may detect scattered photons, resulting in a change in the observed (or effective) extinction, depending on the spatial distribution of the dust and the resolution of the instrument. We investigate the influence of clumpy dust distributions on effective extinction toward embed...

  6. Compound stimulus extinction reduces spontaneous recovery in humans

    OpenAIRE

    Coelho, Cesar A.O.; Dunsmoor, Joseph E.; Phelps, Elizabeth A.

    2015-01-01

    Fear-related behaviors are prone to relapse following extinction. We tested in humans a compound extinction design (“deepened extinction”) shown in animal studies to reduce post-extinction fear recovery. Adult subjects underwent fear conditioning to a visual and an auditory conditioned stimulus (CSA and CSB, respectively) separately paired with an electric shock. The target CS (CSA) was extinguished alone followed by compound presentations of the extinguished CSA and nonextinguished CSB. Reco...

  7. Experience with Dynamic Reinforcement Rates Decreases Resistance to Extinction

    OpenAIRE

    Craig, Andrew R.; Shahan, Timothy A

    2016-01-01

    The ability of organisms to detect reinforcer-rate changes in choice preparations is positively related to two factors: the magnitude of the change in rate and the frequency with which rates change. Gallistel (2012) suggested similar rate-detection processes are responsible for decreases in responding during operant extinction. Although effects of magnitude of change in reinforcer rate on resistance to extinction are well known (e.g., the partial-reinforcement-extinction effect), effects of f...

  8. Primate extinction risk and historical patterns of speciation and extinction in relation to body mass.

    Science.gov (United States)

    Matthews, Luke J; Arnold, Christian; Machanda, Zarin; Nunn, Charles L

    2011-04-22

    Body mass is thought to influence diversification rates, but previous studies have produced ambiguous results. We investigated patterns of diversification across 100 trees obtained from a new Bayesian inference of primate phylogeny that sampled trees in proportion to their posterior probabilities. First, we used simulations to assess the validity of previous studies that used linear models to investigate the links between IUCN Red List status and body mass. These analyses support the use of linear models for ordinal ranked data on threat status, and phylogenetic generalized linear models revealed a significant positive correlation between current extinction risk and body mass across our tree block. We then investigated historical patterns of speciation and extinction rates using a recently developed maximum-likelihood method. Specifically, we predicted that body mass correlates positively with extinction rate because larger bodied organisms reproduce more slowly, and body mass correlates negatively with speciation rate because smaller bodied organisms are better able to partition niche space. We failed to find evidence that extinction rates covary with body mass across primate phylogeny. Similarly, the speciation rate was generally unrelated to body mass, except in some tests that indicated an increase in the speciation rate with increasing body mass. Importantly, we discovered that our data violated a key assumption of sample randomness with respect to body mass. After correcting for this bias, we found no association between diversification rates and mass.

  9. Extinction in the Galaxy from surface brightnesses of ESO-LV galaxies : Testing "standard" extinction maps

    NARCIS (Netherlands)

    Choloniewski, J.; Valentijn, E. A.

    2003-01-01

    A new method for the determination of the extinction in the Galaxy is proposed. The method uses surface brightnesses of external galaxies in the B and R-bands. The observational data have been taken from the ESO-LV galaxy catalog. As a first application of our model we derive the ratio of R-band to

  10. Neural consequences of somatosensory extinction: an fMRI study.

    Science.gov (United States)

    Kobayashi, Michiko; Takeda, Katsuhiko; Kaminaga, Tatsuro; Shimizu, Teruo; Iwata, Makoto

    2005-11-01

    There are currently two main interpretations proposing mechanisms underlying tactile extinction: sensory and attention deficit hypotheses. Kinsbourne proposed an opponent processor model to support the attention deficit hypothesis. He insisted that bilateral hemispheres interact reciprocally through contralaterally oriented vectors, and in patients presenting extinction, balance is impaired, causing inattention. From Kinsbourne's point of view, extinction is not caused by sensory disturbance but inattention, therefore even in extinction patients, simultaneous bilateral stimuli should reach the bilateral primary sensory cortices (SI). Using functional magnetic resonance imaging (fMRI), tactile stimuli were administered to both hands of healthy subjects as well as a tactile extinction patient. The patient with tactile extinction extinguished right palm stimuli following simultaneous palm stimulation. During the fMRI study, we gave tactile stimuli to the right palm, the left palm, and simultaneously to both palms. In normal subjects, simultaneous bilateral stimuli activated the bilateral SI and bilateral secondary sensory cortices (SII). In the patient with right tactile extinction, simultaneous bilateral stimuli activated the bilateral SI along with the bilateral SII and right superior parietal lobule. Our study suggests that activation of SI is insufficient to engender an awareness of sensory stimuli. From the view point of Kinsbourne, stimulus driven activity in one hemisphere suppresses activity in the other hemisphere via callosal connections. Our results support the notion that an undamaged superior parietal lobule in the patient with tactile extinction suppresses the damaged parietal lobe function and causes extinction.

  11. Extinction and ecosystem function in the marine benthos.

    Science.gov (United States)

    Solan, Martin; Cardinale, Bradley J; Downing, Amy L; Engelhardt, Katharina A M; Ruesink, Jennifer L; Srivastava, Diane S

    2004-11-12

    Rapid changes in biodiversity are occurring globally, yet the ecological impacts of diversity loss are poorly understood. Here we use data from marine invertebrate communities to parameterize models that predict how extinctions will affect sediment bioturbation, a process vital to the persistence of aquatic communities. We show that species extinction is generally expected to reduce bioturbation, but the magnitude of reduction depends on how the functional traits of individual species covary with their risk of extinction. As a result, the particular cause of extinction and the order in which species are lost ultimately govern the ecosystem-level consequences of biodiversity loss.

  12. Hypoxia, global warming, and terrestrial late Permian extinctions.

    Science.gov (United States)

    Huey, Raymond B; Ward, Peter D

    2005-04-15

    A catastrophic extinction occurred at the end of the Permian Period. However, baseline extinction rates appear to have been elevated even before the final catastrophe, suggesting sustained environmental degradation. For terrestrial vertebrates during the Late Permian, the combination of a drop in atmospheric oxygen plus climate warming would have induced hypoxic stress and consequently compressed altitudinal ranges to near sea level. Our simulations suggest that the magnitude of altitudinal compression would have forced extinctions by reducing habitat diversity, fragmenting and isolating populations, and inducing a species-area effect. It also might have delayed ecosystem recovery after the mass extinction.

  13. Experience with dynamic reinforcement rates decreases resistance to extinction.

    Science.gov (United States)

    Craig, Andrew R; Shahan, Timothy A

    2016-03-01

    The ability of organisms to detect reinforcer-rate changes in choice preparations is positively related to two factors: the magnitude of the change in rate and the frequency with which rates change. Gallistel (2012) suggested similar rate-detection processes are responsible for decreases in responding during operant extinction. Although effects of magnitude of change in reinforcer rate on resistance to extinction are well known (e.g., the partial-reinforcement-extinction effect), effects of frequency of changes in rate prior to extinction are unknown. Thus, the present experiments examined whether frequency of changes in baseline reinforcer rates impacts resistance to extinction. Pigeons pecked keys for variable-interval food under conditions where reinforcer rates were stable and where they changed within and between sessions. Overall reinforcer rates between conditions were controlled. In Experiment 1, resistance to extinction was lower following exposure to dynamic reinforcement schedules than to static schedules. Experiment 2 showed that resistance to presession feeding, a disruptor that should not involve change-detection processes, was unaffected by baseline-schedule dynamics. These findings are consistent with the suggestion that change detection contributes to extinction. We discuss implications of change-detection processes for extinction of simple and discriminated operant behavior and relate these processes to the behavioral-momentum based approach to understanding extinction.

  14. Has the Earth's sixth mass extinction already arrived?

    Science.gov (United States)

    Barnosky, Anthony D; Matzke, Nicholas; Tomiya, Susumu; Wogan, Guinevere O U; Swartz, Brian; Quental, Tiago B; Marshall, Charles; McGuire, Jenny L; Lindsey, Emily L; Maguire, Kaitlin C; Mersey, Ben; Ferrer, Elizabeth A

    2011-03-03

    Palaeontologists characterize mass extinctions as times when the Earth loses more than three-quarters of its species in a geologically short interval, as has happened only five times in the past 540 million years or so. Biologists now suggest that a sixth mass extinction may be under way, given the known species losses over the past few centuries and millennia. Here we review how differences between fossil and modern data and the addition of recently available palaeontological information influence our understanding of the current extinction crisis. Our results confirm that current extinction rates are higher than would be expected from the fossil record, highlighting the need for effective conservation measures.

  15. Requirement for BDNF in the reconsolidation of fear extinction.

    Science.gov (United States)

    Radiske, Andressa; Rossato, Janine I; Köhler, Cristiano A; Gonzalez, Maria Carolina; Medina, Jorge H; Cammarota, Martín

    2015-04-22

    Therapies based on the impairment of reconsolidation or the enhancement of extinction offer the possibility of decreasing the persistent recollection of distressing memories. However, the direct interplay between reconsolidation and extinction has rarely been considered. Previously, we reported that reactivation induces reconsolidation of fear extinction memory. Here, using a step-down inhibitory avoidance learning paradigm in rats, we show that intrahippocampus infusion of function-blocking anti-BDNF antibody immediately or 6 h after extinction memory reactivation impairs the reconsolidation of extinction. Extinction memory reactivation increases proBDNF, BDNF, and tropomyosin receptor kinase B (TrkB) phosphorylation levels in dorsal CA1, while blocking BDNF maturation in the hippocampus with plasminogen activator inhibitor 1 hinders the persistence of extinction and induces the recurrence of fear. Moreover, coinfusion of recombinant BDNF (0.25 μg/side) after extinction memory reactivation impedes the recovery of the avoidance response induced by inhibiting gene expression and protein synthesis in the dorsal hippocampus. Our findings unravel a new role for BDNF, suggesting that this neurotrophin is necessary and sufficient to maintain the reactivated fear extinction engram.

  16. Extinction of Learned Fear Induces Hippocampal Place Cell Remapping.

    Science.gov (United States)

    Wang, Melissa E; Yuan, Robin K; Keinath, Alexander T; Ramos Álvarez, Manuel M; Muzzio, Isabel A

    2015-06-17

    The extinction of learned fear is a hippocampus-dependent process thought to embody new learning rather than erasure of the original fear memory, although it is unknown how these competing contextual memories are represented in the hippocampus. We previously demonstrated that contextual fear conditioning results in hippocampal place cell remapping and long-term stabilization of novel representations. Here we report that extinction learning also induces place cell remapping in C57BL/6 mice. Specifically, we observed cells that preferentially remapped during different stages of learning. While some cells remapped in both fear conditioning and extinction, others responded predominantly during extinction, which may serve to modify previous representations as well as encode new safe associations. Additionally, we found cells that remapped primarily during fear conditioning, which could facilitate reacquisition of the original fear association. Moreover, we also observed cells that were stable throughout learning, which may serve to encode the static aspects of the environment. The short-term remapping observed during extinction was not found in animals that did not undergo fear conditioning, or when extinction was conducted outside of the conditioning context. Finally, conditioning and extinction produced an increase in spike phase locking to the theta and gamma frequencies. However, the degree of remapping seen during conditioning and extinction only correlated with gamma synchronization. Our results suggest that the extinction learning is a complex process that involves both modification of pre-existing memories and formation of new ones, and these traces coexist within the same hippocampal representation.

  17. Critical Multitype Branching Systems: Extinction Results

    CERN Document Server

    Kevei, Peter

    2011-01-01

    We consider a critical branching particle system in $\\R^d$, composed of individuals of a finite number of types $i\\in\\{1,...,K\\}$. Each individual of type $i$ moves independently according to a symmetric $\\alpha_i$-stable motion. We assume that the particle lifetimes and offspring distributions are type-dependent. Under the usual independence assumptions in branching systems, we prove extinction theorems in the following cases: (1) all the particle lifetimes have finite mean, or (2) there is a type whose lifetime distribution has heavy tail, and the other lifetimes have finite mean. We get a more complex dynamics by assuming in case (2) that the most mobile particle type corresponds to a finite-mean lifetime: in this case, local extinction of the population is determined by an interaction of the parameters (offspring variability, mobility, longevity) of the long-living type and those of the most mobile type. The proofs are based on a precise analysis of the occupation times of a related Markov renewal process...

  18. Patterns of species ranges, speciation, and extinction.

    Science.gov (United States)

    Birand, Aysegul; Vose, Aaron; Gavrilets, Sergey

    2012-01-01

    The exact nature of the relationship among species range sizes, speciation, and extinction events is not well understood. The factors that promote larger ranges, such as broad niche widths and high dispersal abilities, could increase the likelihood of encountering new habitats but also prevent local adaptation due to high gene flow. Similarly, low dispersal abilities or narrower niche widths could cause populations to be isolated, but such populations may lack advantageous mutations due to low population sizes. Here we present a large-scale, spatially explicit, individual-based model addressing the relationships between species ranges, speciation, and extinction. We followed the evolutionary dynamics of hundreds of thousands of diploid individuals for 200,000 generations. Individuals adapted to multiple resources and formed ecological species in a multidimensional trait space. These species varied in niche widths, and we observed the coexistence of generalists and specialists on a few resources. Our model shows that species ranges correlate with dispersal abilities but do not change with the strength of fitness trade-offs; however, high dispersal abilities and low resource utilization costs, which favored broad niche widths, have a strong negative effect on speciation rates. An unexpected result of our model is the strong effect of underlying resource distributions on speciation: in highly fragmented landscapes, speciation rates are reduced.

  19. Evolutionary Catastrophes: The Science of Mass Extinction

    Science.gov (United States)

    Hames, Willis

    The stories behind the greatest scientific controversies are more than entertaining. They provide windows into the evolution of scientific thought, scientific method, technological achievements and their research applications, and the influence of individuals and personalities on a community's acceptance of a theory Epic controversies surround the theories for Earth's mass extinction events, and none is more spectacular than the continuing polemic over the Cretaceous-Tertiary (K/T) mass extinctions and ultimate demise of the dinosaurs.In contrast to other great scientific debates, we tend to view the K/T event in the context of a crime scene, where the spectacularly diverse flora and fauna of a primordial Eden were unwittingly slain by one or more ruthless and efficient killers. A “foreign” suspect has been fingered; an intruder that killed suddenly and randomly has become the principal suspect. The main clues uncovered in the case include a global K/T iridium anomaly; shock-deformed minerals in K/T boundary sediments; the ˜6 5 m.y-old Deccan flood-basalt province, which covered an area roughly the size of France; and the ˜6 5 m.y-old Chicxulub impact crater in the Yucatan peninsula, which seems to be among the largest to have formed in the inner solar system over the past billion years.

  20. Acute stress impairs the retrieval of extinction memory in humans.

    Science.gov (United States)

    Raio, Candace M; Brignoni-Perez, Edith; Goldman, Rachel; Phelps, Elizabeth A

    2014-07-01

    Extinction training is a form of inhibitory learning that allows an organism to associate a previously aversive cue with a new, safe outcome. Extinction does not erase a fear association, but instead creates a competing association that may or may not be retrieved when a cue is subsequently encountered. Characterizing the conditions under which extinction learning is expressed is important to enhancing the treatment of anxiety disorders that rely on extinction-based exposure therapy as a primary treatment technique. The ventromedial prefrontal cortex, which plays a critical role in the expression of extinction memory, has been shown to be functionally impaired after stress exposure. Further, recent work in rodents has demonstrated that exposure to stress leads to deficits in extinction retrieval, although this has yet to be tested in humans. To explore how stress might influence extinction retrieval in humans, participants underwent a differential aversive learning paradigm, in which one image was probabilistically paired with an aversive shock while the other image denoted safety. Extinction training directly followed, at which point reinforcement was omitted. A day later, participants returned to the lab and either completed an acute stress manipulation (i.e., cold pressor), or a control task, before undergoing an extinction retrieval test. Skin conductance responses and salivary cortisol concentrations were measured throughout each session as indices of fear arousal and neuroendocrine stress response, respectively. The efficacy of our stress induction was established by observing significant increases in cortisol for the stress condition only. We examined extinction retrieval by comparing conditioned responses during the last trial of extinction (day 1) with that of the first trial of re-extinction (day 2). Groups did not differ on initial fear acquisition or extinction, however, a day later participants in the stress group (n=27) demonstrated significantly

  1. 3,4-Methylenedioxymethamphetamine facilitates fear extinction learning.

    Science.gov (United States)

    Young, M B; Andero, R; Ressler, K J; Howell, L L

    2015-09-15

    Acutely administered 3,4-methylenedioxymethamphetamine (MDMA, 'ecstasy') has been proposed to have long-term positive effects on post-traumatic stress disorder (PTSD) symptoms when combined with psychotherapy. No preclinical data support a mechanistic basis for these claims. Given the persistent nature of psychotherapeutic gains facilitated by MDMA, we hypothesized that MDMA improves fear extinction learning, a key process in exposure-based therapies for PTSD. In these experiments, mice were first exposed to cued fear conditioning and treated with drug vehicle or MDMA before extinction training 2 days later. MDMA was administered systemically and also directly targeted to brain structures known to contribute to extinction. In addition to behavioral measures of extinction, changes in mRNA levels of brain-derived neurotrophic factor (Bdnf) and Fos were measured after MDMA treatment and extinction. MDMA (7.8 mg kg(-1)) persistently and robustly enhanced long-term extinction when administered before extinction training. MDMA increased the expression of Fos in the amygdala and medial prefrontal cortex (mPFC), whereas increases in Bdnf expression were observed only in the amygdala after extinction training. Extinction enhancements were recapitulated when MDMA (1 μg) was infused directly into the basolateral complex of the amygdala (BLA), and enhancement was abolished when BDNF signaling was inhibited before extinction. These findings suggest that MDMA enhances fear memory extinction through a BDNF-dependent mechanism, and that MDMA may be a useful adjunct to exposure-based therapies for PTSD and other anxiety disorders characterized by altered fear learning.

  2. Predicting overfishing and extinction threats in multispecies fisheries.

    Science.gov (United States)

    Burgess, Matthew G; Polasky, Stephen; Tilman, David

    2013-10-01

    Threats to species from commercial fishing are rarely identified until species have suffered large population declines, by which time remedial actions can have severe economic consequences, such as closure of fisheries. Many of the species most threatened by fishing are caught in multispecies fisheries, which can remain profitable even as populations of some species collapse. Here we show for multispecies fisheries that the biological and socioeconomic conditions that would eventually cause species to be severely depleted or even driven extinct can be identified decades before those species experience high harvest rates or marked population declines. Because fishing effort imposes a common source of mortality on all species in a fishery, the long-term impact of a fishery on a species is predicted by measuring its loss rate relative to that of species that influence the fishery's maximal effort. We tested our approach on eight Pacific tuna and billfish populations, four of which have been identified recently as in decline and threatened with overfishing. The severe depletion of all four populations could have been predicted in the 1950s, using our approach. Our results demonstrate that species threatened by human harvesting can be identified much earlier, providing time for adjustments in harvesting practices before consequences become severe and fishery closures or other socioeconomically disruptive interventions are required to protect species.

  3. The Effects of Context Extinction on US Signal Value

    Science.gov (United States)

    Goddard Murray J.

    2007-01-01

    Two experiments with rats examined the effects of context extinction on responding to the signal value of an unconditioned stimulus (US). In Experiment 1, US signal value was first trained when a single food pellet signaled the delivery of three additional pellets. After training, rats received either context extinction (CE) or home cage (HC)…

  4. A sulfidic driver for the end-Ordovician mass extinction

    DEFF Research Database (Denmark)

    Hammarlund, Emma U.; Dahl, Tais Wittchen; Harper, David A.T.

    2012-01-01

    the first pulse of the extinction, euxinia and a steepened oxygen gradient in the water column caused habitat loss for deep-water benthic and nektonic organisms. During the second pulse, the transgression of anoxic water onto the continental shelves caused extinction in shallower habitats. (C) 2012 Elsevier...

  5. High-precision timeline for Earth's most severe extinction.

    Science.gov (United States)

    Burgess, Seth D; Bowring, Samuel; Shen, Shu-zhong

    2014-03-04

    The end-Permian mass extinction was the most severe loss of marine and terrestrial biota in the last 542 My. Understanding its cause and the controls on extinction/recovery dynamics depends on an accurate and precise age model. U-Pb zircon dates for five volcanic ash beds from the Global Stratotype Section and Point for the Permian-Triassic boundary at Meishan, China, define an age model for the extinction and allow exploration of the links between global environmental perturbation, carbon cycle disruption, mass extinction, and recovery at millennial timescales. The extinction occurred between 251.941 ± 0.037 and 251.880 ± 0.031 Mya, an interval of 60 ± 48 ka. Onset of a major reorganization of the carbon cycle immediately precedes the initiation of extinction and is punctuated by a sharp (3‰), short-lived negative spike in the isotopic composition of carbonate carbon. Carbon cycle volatility persists for ∼500 ka before a return to near preextinction values. Decamillenial to millennial level resolution of the mass extinction and its aftermath will permit a refined evaluation of the relative roles of rate-dependent processes contributing to the extinction, allowing insight into postextinction ecosystem expansion, and establish an accurate time point for evaluating the plausibility of trigger and kill mechanisms.

  6. Chronic Cannabinoid Administration in Vivo Compromises Extinction of Fear Memory

    Science.gov (United States)

    Lin, Hui-Ching; Mao, Sheng-Chun; Chen, Po-See; Gean, Po-Wu

    2008-01-01

    Endocannabinoids are critically involved in the extinction of fear memory. Here we examined the effects of repeated cannabinoid administration on the extinction of fear memory in rats and on inhibitory synaptic transmission in medial prefrontal cortex (mPFC) slices. Rats were treated with the CB1 receptor agonist WIN55212-2 (WIN 10 mg/kg, i.p.)…

  7. A sulfidic driver for the end-Ordovician mass extinction

    DEFF Research Database (Denmark)

    Hammarlund, Emma; Dahl, Tais Wittchen; Harper, David Alexander Taylor

    2012-01-01

    the first pulse of the extinction, euxinia and a steepened oxygen gradient in the water column caused habitat loss for deep-water benthic and nektonic organisms. During the second pulse, the transgression of anoxic water onto the continental shelves caused extinction in shallower habitats. © 2012 Elsevier B.V....

  8. Late Pleistocene and Holocene mammal extinctions on continental Africa

    Science.gov (United States)

    Faith, J. Tyler

    2014-01-01

    Understanding the cause of late Quaternary mammal extinctions is the subject of intense debate spanning the fields of archeology and paleontology. In the global context, the losses on continental Africa have received little attention and are poorly understood. This study aims to inspire new discussion of African extinctions through a review of the extinct species and the chronology and possible causes of those extinctions. There are at least 24 large mammal (> 5 kg) species known to have disappeared from continental Africa during the late Pleistocene or Holocene, indicating a much greater taxonomic breadth than previously recognized. Among the better sampled taxa, these losses are restricted to the terminal Pleistocene and early Holocene, between 13,000 and 6000 yrs ago. The African extinctions preferentially affected species that are grazers or prefer grasslands. Where good terrestrial paleoenvironmental records are present, extinctions are associated with changes in the availability, productivity, or structure of grassland habitats, suggesting that environmental changes played a decisive role in the losses. In the broader evolutionary context, these extinctions represent recent examples of selective taxonomic winnowing characterized by the loss of grassland specialists and the establishment of large mammal communities composed of more ecologically flexible taxa over the last million years. There is little reason to believe that humans played an important role in African extinctions.

  9. Extinction of drug seeking: Neural circuits and approaches to augmentation.

    Science.gov (United States)

    McNally, Gavan P

    2014-01-01

    Extinction training can reduce drug seeking behavior. This article reviews the neural circuits that contribute to extinction and approaches to enhancing the efficacy of extinction. Extinction of drug seeking depends on cortical-striatal-hypothalamic and cortical-hypothalamic-thalamic pathways. These pathways interface, in the hypothalamus and thalamus respectively, with the neural circuits controlling reinstatement of drug seeking. The actions of these pathways at lateral hypothalamic orexin neurons, and of perifornical/dorsomedial hypothalamic derived opioid peptides at kappa opioid receptors in the paraventricular thalamus, are important for inhibiting drug seeking. Despite effectively reducing or inhibiting drug seeking in the short term, extinguished drug seeking is prone to relapse. Three different strategies to augment extinction learning or retrieval are reviewed: pharmacological augmentation, retrieval - extinction training, and provision of extinction memory retrieval cues. These strategies have been used in animal models and with human drug users to enhance extinction or cue exposure treatments. They hold promise as novel strategies to promote abstinence from drug seeking. This article is part of a Special Issue entitled 'NIDA 40th Anniversary Issue'.

  10. Deepened Extinction following Compound Stimulus Presentation: Noradrenergic Modulation

    Science.gov (United States)

    Janak, Patricia H.; Corbit, Laura H.

    2011-01-01

    Behavioral extinction is an active form of new learning involving the prediction of nonreward where reward has previously been present. The expression of extinction learning can be disrupted by the presentation of reward itself or reward-predictive stimuli (reinstatement) as well as the passage of time (spontaneous recovery) or contextual changes…

  11. Asymptotic behaviour near extinction of continuous-state branching processes

    OpenAIRE

    Pardo, Juan Carlos; Berzunza, Gabriel

    2016-01-01

    In this note, we study the asymptotic behaviour near extinction of (sub-) critical continuous state branching processes. In particular, we establish an analogue of Khintchin's law of the iterated logarithm near extinction time for a continuous state branching process whose branching mechanism satisfies a given condition and its reflected process at its infimum.

  12. Extinction risks from climate change: macroecological and historical insights.

    Science.gov (United States)

    Jansson, Roland

    2009-06-09

    Human-induced climate change may threaten a large proportion of Earth's biota, but the uncertainties involved in projecting the future geographical distributions of species make quantitative predictions of extinction risk difficult to make. I discuss how insight from recent advances in macroecology and knowledge about species responses to past climate change can help predict extinction risks more accurately.

  13. Expected time-invariant effects of biological traits on mammal species duration.

    Science.gov (United States)

    Smits, Peter D

    2015-10-20

    Determining which biological traits influence differences in extinction risk is vital for understanding the differential diversification of life and for making predictions about species' vulnerability to anthropogenic impacts. Here I present a hierarchical Bayesian survival model of North American Cenozoic mammal species durations in relation to species-level ecological factors, time of origination, and phylogenetic relationships. I find support for the survival of the unspecialized as a time-invariant generalization of trait-based extinction risk. Furthermore, I find that phylogenetic and temporal effects are both substantial factors associated with differences in species durations. Finally, I find that the estimated effects of these factors are partially incongruous with how these factors are correlated with extinction risk of the extant species. These findings parallel previous observations that background extinction is a poor predictor of mass extinction events and suggest that attention should be focused on mass extinctions to gain insight into modern species loss.

  14. Light extinction method for solubility measurement

    Institute of Scientific and Technical Information of China (English)

    Shui Wang; Jingkang Wang; Qiuxiang Yin; Yongli Wang

    2005-01-01

    A novel measurement method for chemical solubility determination is brought forward, in which the advantages of two kinds of traditional methods are united. The results show that the concentration of unsolved particles suspending in the solution can be determined by measuring I/I0 (ratio of the transmission intensity to the incident intensity) of the laser beam permeating through the solution according to Lamben-Beer law. The biggest relative deviation for the solubility data determined is less than 1.5% for the sparingly soluble substances and 0.3% for the opulently soluble substances. By comparison of the experimental solubility data with previous data, the light extinction method is demonstrated to be stable and reliable.

  15. Molar extinction coefficients of some fatty acids

    Science.gov (United States)

    Sandhu, G. K.; Singh, Kulwant; Lark, B. S.; Gerward, L.

    2002-10-01

    The attenuation of gamma rays in some fatty acids, viz. formic acid (CH 2O 2), acetic acid (C 2H 4O 2), propionic acid (C 3H 6O 2), butyric acid (C 4H 8O 2), n-hexanoic acid (C 6H 12O 2), n-caprylic acid (C 8H 16O 2), lauric acid (C 12H 24O 2), myristic acid (C 14H 28O 2), palmitic acid (C 16H 32O 2), oleic acid (C 18H 34O 2) and stearic acid (C 18H 36O 2), has been measured at the photon energies 81, 356, 511, 662, 1173 and 1332 keV. Experimental values for the molar extinction coefficient, the effective atomic number and the electron density have been derived and compared with theoretical calculations. There is good agreement between experiment and theory.

  16. [Silphium from Cyrenaica, an extinct medicinal plant].

    Science.gov (United States)

    Haas, Charles

    2008-01-01

    Silphium was both a spice and a medicinal plant. It was regarded as "one of the most precious gifts of Nature to man" (Pliny), and was one of the main sources of revenue contributing to Cyrenaica's wealth. It was so critical to the Cyrenian economy that most of their coins bore a picture of the plant. But, by the time of Nero, the plant had become extinct, probably as a result of overgrazing and overcropping. The botanical identification of silphium is dificult, but the plant was an Umbellifera and most closely resembled Ferula tingitana. Hippocrates, Celsus, Galen and Oribasius recommended it for quartan fever, but it was also said to be useful for many other diseases.

  17. Carriers of the astronomical 2175 ? extinction feature

    Energy Technology Data Exchange (ETDEWEB)

    Bradley, J; Dai, Z; Ernie, R; Browning, N; Graham, G; Weber, P; Smith, J; Hutcheon, I; Ishii, H; Bajt, S; Floss, C; Stadermann, F

    2004-07-20

    The 2175 {angstrom} extinction feature is by far the strongest spectral signature of interstellar dust observed by astronomers. Forty years after its discovery the origin of the feature and the nature of the carrier remain controversial. The feature is enigmatic because although its central wavelength is almost invariant its bandwidth varies strongly from one sightline to another, suggesting multiple carriers or a single carrier with variable properties. Using a monochromated transmission electron microscope and valence electron energy-loss spectroscopy we have detected a 5.7 eV (2175 {angstrom}) feature in submicrometer-sized interstellar grains within interplanetary dust particles (IDPs) collected in the stratosphere. The carriers are organic carbon and amorphous silicates that are abundant and closely associated with one another both in IDPs and in the interstellar medium. Multiple carriers rather than a single carrier may explain the invariant central wavelength and variable bandwidth of the astronomical 2175 {angstrom} feature.

  18. Promotion of cooperation by selective group extinction

    Science.gov (United States)

    Böttcher, Marvin A.; Nagler, Jan

    2016-06-01

    Multilevel selection is an important organizing principle that crucially underlies evolutionary processes from the emergence of cells to eusociality and the economics of nations. Previous studies on multilevel selection assumed that the effective higher-level selection emerges from lower-level reproduction. This leads to selection among groups, although only individuals reproduce. We introduce selective group extinction, where groups die with a probability inversely proportional to their group fitness. When accounting for this the critical benefit-to-cost ratio is substantially lowered. Because in game theory and evolutionary dynamics the degree of cooperation crucially depends on this ratio above which cooperation emerges, previous studies may have substantially underestimated the establishment and maintenance of cooperation.

  19. Scientists Drill for Clues to Dinosaur Extinction

    Institute of Scientific and Technical Information of China (English)

    张一

    2001-01-01

    @@ [选注者言:20世纪70年代,墨西哥的Yucatan半岛的石油勘探发现了著名的Chicxulub大坑.直到20世纪90年代,科学家才认定,此大坑是由6千5百万年的一颗小行星撞击地球而形成,这次撞击导致地球上的恐龙灭绝.现在,科学家拟再次对此大坑作一番发掘研究,旨在:to determine once andfor all(一劳永逸的;彻底地)whatled to the global extinction(消灭)of the dinosaurs(恐龙)millions of years ago.

  20. Predation effects on mean time to extinction under demographic stochasticity.

    Science.gov (United States)

    Palamara, Gian Marco; Delius, Gustav W; Smith, Matthew J; Petchey, Owen L

    2013-10-01

    Methods for predicting the probability and timing of a species' extinction are typically based on single species population dynamics. Assessments of extinction risk often lack effects of interspecific interactions. We study a birth and death process in which the death rate includes an effect of predation. Predation is included via a general nonlinear expression for the functional response of predation to prey density. We investigate the effects of the foraging parameters (e.g. attack rate and handling time) on the mean time to extinction. Mean time to extinction varies by orders of magnitude when we alter the foraging parameters, even when we exclude the effects of these parameters on the equilibrium population size. Conclusions are robust to assumptions about initial conditions and variable predator abundance. These findings clearly show that accounting for the nature of interspecific interactions is likely to be critically important when estimating extinction risk.

  1. Mass Extinctions and The Sun's Encounters with Spiral Arms

    CERN Document Server

    Leitch, E M; Vasisht, Erik M. Leitch & Gautam

    1998-01-01

    The terrestrial fossil record shows that the exponential rise in biodiversity since the Precambrian period has been punctuated by large extinctions, at intervals of 40 to 140 Myr. These mass extinctions represent extremes over a background of smaller events and the natural process of species extinction. We point out that the non-terrestrial phenomena proposed to explain these events, such as boloidal impacts (a candidate for the end-Cretaceous extinction), and nearby supernovae, are collectively far more effective during the solar system's traversal of spiral arms. Using the best available data on the location and kinematics of the Galactic spiral structure (including distance scale and kinematic uncertainties), we present evidence that arm crossings provide a viable explanation for the timing of the large extinctions.

  2. Extinction of Harrington's mountain goat

    Energy Technology Data Exchange (ETDEWEB)

    Mead, J.I.; Martin, P.S.; Euler, R.C.; Long, A.; Jull, A.J.T.; Toolin, L.J.; Donahue, D.J.; Linick, T.W.

    1986-02-01

    Keratinous horn sheaths of the extinct Harrington's mountain goat, Oreamnos harringtoni, were recovered at or near the surface of dry caves of the Grand Canyon, Arizona. Twenty-three separate specimens from two caves were dated nondestructively by the tandem accelerator mass spectrometer (TAMS). Both the TAMS and the conventional dates indicate that Harrington's mountain goat occupied the Grand Canyon for at least 19,000 years prior to becoming extinct by 11,160 +/- 125 radiocarbon years before present. The youngest average radiocarbon dates on Shasta ground sloths, Nothrotheriops shastensis, from the region are not significantly younger than those on extinct mountain goats. Rather than sequential extinction with Harrington's mountain goat disappearing from the Grand Canyon before the ground sloths, as one might predict in view of evidence of climatic warming at the time, the losses were concurrent. Both extinctions coincide with the regional arrival of Clovis hunters.

  3. Porous and Fluffy Grains in the Regions of Anomalous Extinction

    Indian Academy of Sciences (India)

    D. B. Vaidya; B. G. Anandarao; J. N. Desai; R. Gupta

    2000-06-01

    It has long been established that the ratio of total to selective extinction is anomalously large (≥ 5) in certain regions of the interstellar medium. In these regions of anomalous extinction the dust grains are likely to be irregular in shape and fluffy in structure. Using discrete dipole approximation (DDA) we calculate the extinction for porous and fluffy grains. We apply DDA first to solid spheroidal particles assumed to be made of a certain (large) number of dipoles. Then we systematically reduce the number of dipoles to model the porous grains. The aggregates of these particles are suggested to form the fluffy grains. We study the extinction for these particles as a function of grain size, porosity and wavelength. We apply these calculations to interpret the observed extinction data in the regions of star formation (e.g. the Orion complex).

  4. Cretaceous stem chondrichthyans survived the end-Permian mass extinction.

    Science.gov (United States)

    Guinot, Guillaume; Adnet, Sylvain; Cavin, Lionel; Cappetta, Henri

    2013-01-01

    Cladodontomorph sharks are Palaeozoic stem chondrichthyans thought to go extinct at the end-Permian mass extinction. This extinction preceded the diversification of euselachians, including modern sharks. Here we describe an outer-platform cladodontomorph shark tooth assemblage from the Early Cretaceous of southern France, increasing the fossil record of this group by circa 120 million years. Identification of this material rests on new histological observations and morphological evidence. Our finding shows that this lineage survived mass extinctions most likely by habitat contraction, using deep-sea refuge environments during catastrophic events. The recorded gap in the cladodontomorph lineage represents the longest gap in the fossil record for an extinct marine vertebrate group. This discovery demonstrates that the deep-sea marine diversity, poorly known during most of the fish evolutionary history, contains essential data for a complete understanding of the long-term evolution of marine fish paleobiodiversity.

  5. Mechanisms of renewal after the extinction of instrumental behavior.

    Science.gov (United States)

    Todd, Travis P

    2013-07-01

    Four experiments with rats examined renewal of extinguished instrumental behavior when the reinforcement histories of the contexts were equated by giving complementary training and extinction of a different response (lever press and chain pull) in each context. In Experiments 1 through 3, renewal occurred when the response was tested in the acquisition context (ABA) or outside the extinction context (AAB and ABC). Further, in Experiments 1 through 3, when both responses were simultaneously available, there was a clear preference for the response that was not in its extinction context. In Experiment 4, renewal was not reduced when testing occurred in a context that had been associated with extinction of the other instrumental response. The experimental designs rule out differential context-reinforcer associations being the only contributing mechanism of renewal, and also raise questions about configural and occasion-setting accounts. The results are consistent with the idea that during extinction an inhibitory association is formed between the context and the response.

  6. Double Mass Extinctions and the Volcanogenic Dark Matter Scenario

    CERN Document Server

    Abbas, S; Mohanty, S; Abbas, Samar; Abbas, Afsar; Mohanty, Shukadev

    1998-01-01

    A few of the major mass extinctions of paleontology have recently been found to consist of two distinct extinction peaks at higher resolution. A viable explanation for this remains elusive. In this paper it is shown that the recently proposed volcanogenic dark matter model can explain this puzzling characteristic of these extinctions. The accumulation and annihilation of dark matter in the center of the Earth due to the passage of a clump leads to excess heat generation with the consequent ejection of superplumes, followed by massive volcanism and attendant mass extinctions. This is preceded by an extinction pulse due to carcinogenesis arising from the direct interaction of the clumped dark matter with living organisms.

  7. Is chytridiomycosis driving Darwin's frogs to extinction?

    Directory of Open Access Journals (Sweden)

    Claudio Soto-Azat

    Full Text Available Darwin's frogs (Rhinoderma darwinii and R. rufum are two species of mouth brooding frogs from Chile and Argentina that have experienced marked population declines. Rhinoderma rufum has not been found in the wild since 1980. We investigated historical and current evidence of Batrachochytrium dendrobatidis (Bd infection in Rhinoderma spp. to determine whether chytridiomycosis is implicated in the population declines of these species. Archived and live specimens of Rhinoderma spp., sympatric amphibians and amphibians at sites where Rhinoderma sp. had recently gone extinct were examined for Bd infection using quantitative real-time PCR. Six (0.9% of 662 archived anurans tested positive for Bd (4/289 R. darwinii; 1/266 R. rufum and 1/107 other anurans, all of which had been collected between 1970 and 1978. An overall Bd-infection prevalence of 12.5% was obtained from 797 swabs taken from 369 extant individuals of R. darwinii and 428 individuals representing 18 other species of anurans found at sites with current and recent presence of the two Rhinoderma species. In extant R. darwinii, Bd-infection prevalence (1.9% was significantly lower than that found in other anurans (7.3%. The prevalence of infection (30% in other amphibian species was significantly higher in sites where either Rhinoderma spp. had become extinct or was experiencing severe population declines than in sites where there had been no apparent decline (3.0%; x(2 = 106.407, P<0.001. This is the first report of widespread Bd presence in Chile and our results are consistent with Rhinoderma spp. declines being due to Bd infection, although additional field and laboratory investigations are required to investigate this further.

  8. Scientists Drill for Clues to Dinosaur Extinction

    Institute of Scientific and Technical Information of China (English)

    张一

    2001-01-01

    20世纪70年代,墨西哥的Yucatan半岛的石油勘探发现了著名的Chicxulub大坑。直到20世纪90年代,科学家才认定,此大坑是由6千5百万年的一颗小行星撞击地球而形成,这次撞击导致地球上的恐龙灭绝。现在,科学家拟再次对此大坑作一番发掘研究,旨在:to determine once andfor all(一劳永逸的;彻底地)what led to the global extinction(消灭)of the dinosaurs(恐龙)millions of years ago。 本文为读者描绘了当年地球遭受此灭顶之灾时的可怕情景: Millions of years before humans even existed,a huge meteorite(陨星)measuring about 6 miles across and weighing perhaps billions of tons crashed intothe planet in a ball of fire,shrouding the Earth in a dense cloud of dust that blocked out sunlight and sent temperatures plummeting(垂直落下). 文中有一句话颇能引起读者的共鸣: It’s a 100 million-year event—they don’t occur that often,thank God. 文中的一个成语的使用却值得商榷: …hoping to determine once and for all(一劳永逸的;彻底地)what led to theglobal extinction(消灭)of the dinosaurs(恐龙)millions of years ago.在科学探索的道路上,once and for all也许只是一种良好

  9. Perseveration of the partial reinforcement effect in extinction with rats over two phases of extinction and two stages of continuous reinforcement.

    Science.gov (United States)

    Calef, Richard S; Choban, Michael C; Glenney, Katherine R; Calef, Ruth A; Schmitt, Erik; Hinte, Sarah; Clegg, Megan; Kraynok, Joseph E; Richards, Sallie D

    2007-02-01

    One group of 10 male albino rats was given partial reinforcement while the other 10 rats received continuous reinforcement in a straight alley. Subjects then experienced five consecutive stages of Extinction 1, Continuous Reinforcement 1, Extinction 2, Continuous Reinforcement 2, and finally, Extinction 3. Analysis showed the partial reinforcement effect in extinction was sustained over two stages of extinction and two stages of continuous reinforcement, since subjects receiving partial reinforcement ran faster than rats given continuous reinforcement throughout all three of the extinction periods. The results seem to support those of Amsel's (1967) and Cabpaldi's (1967) theoretical formulations of the partial reinforcement effect in extinction.

  10. New Evidence from Alashan Area of West Nei Monggol to Reveal Enigma of Dinosaur Extinction

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Dinosaur extinction of the late Cretaceous is an enigma. A scorched earth layer was discovered at the end of the Cretaceous system from drilling cores in west of Nei Monggol in China. And there was a creature interruption for 6-8 million years after that period through fossil analysis of the area and the adjacent area. Just in the same system of scorched earth layer, the Polish scientists found the abnormal geo-chemical phenomena and high-dense universal substances generally contained in meteorite. The authors think, at the end of Cretaceous, many celestial bodies ran into the earth. The collision caused fires all over the world and slowed down the speed of the earth rotation suddenly. The oxygen density decreased sharply. And because of the sudden increase of day length, the biological clock of dinosaur was in the state of chaos. That’s the reason why dinosaurs got extinct. It took a very long time both for the oxygen to return normal for most creatures to live and for the new species fit for new rotation speed of the earth to come into being. That’s why there was the creature interruption after the extinction of the dinosaur.

  11. How to detect and visualize extinction thresholds for structured PVA models

    NARCIS (Netherlands)

    Hildenbrandt, H.; Grimm, V.

    2006-01-01

    An extinction threshold is a population size below which extinction risk increases to beyond critical values. However, detecting extinction thresholds for structured population models is not straightforward because many different population structures may correspond to the same population size. More

  12. Unpaired shocks during extinction weaken the contextual renewal of a conditioned discrimination

    NARCIS (Netherlands)

    Vervliet, B.; Vansteenwegen, D.; Hermans, D.

    2010-01-01

    Extinction is generally more fragile than conditioning, as illustrated by the contextual renewal effect. The traditional extinction procedure entails isolated presentations of the conditioned stimulus. Extinction may be boosted by adding isolated presentations of the unconditioned stimulus, as this

  13. Glutamate Receptors in Extinction and Extinction-Based Therapies for Psychiatric Illness

    OpenAIRE

    Myers, Karyn M.; William A Carlezon; Davis, Michael

    2010-01-01

    Some psychiatric illnesses involve a learned component. For example, in posttraumatic stress disorder, memories triggered by trauma-associated cues trigger fear and anxiety, and in addiction, drug-associated cues elicit drug craving and withdrawal. Clinical interventions to reduce the impact of conditioned cues in eliciting these maladaptive conditioned responses are likely to be beneficial. Extinction is a method of lessening conditioned responses and involves repeated exposures to a cue in ...

  14. Behavioral and neural bases of extinction learning in Hermissenda

    Directory of Open Access Journals (Sweden)

    Joel S. Cavallo

    2014-08-01

    Full Text Available Extinction of classical conditioning is thought to produce new learning that masks or interferes with the original memory. However, research in the nudibranch Hermissenda crassicornis (H.c. has challenged this view, and instead suggested that extinction erased the original associative memory. We have re-examined extinction in H.c. to test whether extinguished associative memories can be detected on the behavioral and cellular levels, and to characterize the temporal variables involved. Associative conditioning using pairings of light (CS and rotation (US produced characteristic suppression of H.c. phototactic behavior. A single session of extinction training (repeated light-alone presentations reversed suppressed behavior back to pre-training levels when administered 15 min after associative conditioning. This effect was abolished if extinction was delayed by 23 hr, and yet was recovered using extended extinction training (three consecutive daily extinction sessions. Extinguished phototactic suppression did not spontaneously recover at any retention interval tested (2-, 24-, 48-, 72-hr, or after additional US presentations (no observed reinstatement. Extinction training (single session, 15 min interval also reversed the pairing-produced increases in light-evoked spike frequencies of Type B photoreceptors, an identified site of associative memory storage that is causally related to phototactic suppression. These results suggest that the behavioral effects of extinction training are not due to temporary suppression of associative memories, but instead represent a reversal of the underlying cellular changes necessary for the expression of learning. In the companion article, we further elucidate mechanisms responsible for extinction-produced reversal of memory-related neural plasticity in Type B photoreceptors.

  15. Adrenal-dependent diurnal modulation of conditioned fear extinction learning.

    Science.gov (United States)

    Woodruff, Elizabeth R; Greenwood, Benjamin N; Chun, Lauren E; Fardi, Sara; Hinds, Laura R; Spencer, Robert L

    2015-06-01

    Post traumatic stress disorder (PTSD) is associated with altered conditioned fear extinction expression and impaired circadian function including dysregulation of glucocorticoid hormone secretion. We examined in adult male rats the relationship between conditioned fear extinction learning, circadian phase, and endogenous glucocorticoids (CORT). Rats maintained on a 12h light:dark cycle were trained and tested across 3 separate daily sessions (conditioned fear acquisition and 2 extinction sessions) that were administered during either the rats' active or inactive circadian phase. In an initial experiment we found that rats at both circadian phases acquired and extinguished auditory cue conditioned fear to a similar degree in the first extinction session. However, rats trained and tested at zeitgeber time-16 (ZT16) (active phase) showed enhanced extinction memory expression during the second extinction session compared to rats trained and tested at ZT4 (inactive phase). In a follow-up experiment, adrenalectomized (ADX) or sham surgery rats were similarly trained and tested across 3 separate daily sessions at either ZT4 or ZT16. ADX had no effect on conditioned fear acquisition or conditioned fear memory. Sham ADX rats trained and tested at ZT16 exhibited better extinction learning across the two extinction sessions compared to all other groups of rats. These results indicate that conditioned fear extinction learning is modulated by time of day, and this diurnal modulation requires the presence of adrenal hormones. These results support an important role of CORT-dependent circadian processes in regulating conditioned fear extinction learning, which may be capitalized upon to optimize effective treatment of PTSD.

  16. Trajectories of Late Permian – Jurassic radiolarian extinction rates: no evidence for an end-Triassic mass extinction

    Directory of Open Access Journals (Sweden)

    W. Kiessling

    2011-02-01

    Full Text Available The hypothesis that ocean acidification was a proximate trigger of the marine end-Triassic mass extinction rests on the assumption that taxa that strongly invest in the secretion of calcium-carbonate skeletons were significantly more affected by the crisis than other taxa. An argument against this hypothesis is the great extinction toll of radiolarians that has been reported from work on local sections. Radiolarians have siliceous tests and thus should be less affected by ocean acidification. We compiled taxonomically vetted occurrences of late Permian and Mesozoic radiolarians and analyzed extinction dynamics of radiolarian genera. Although extinction rates were high at the end of the Triassic, there is no evidence for a mass extinction in radiolarians but rather significantly higher background extinction in the Triassic than in the Jurassic. Although the causes for this decline in background extinction levels remain unclear, the lack of a major evolutionary response to the end-Triassic event, gives support for the hypothesis that ocean acidification was involved in the dramatic extinctions of many calcifying taxa. doi:10.1002/mmng.201000017

  17. Association of extinction risk of saproxylic beetles with ecological degradation of forests in Europe.

    Science.gov (United States)

    Seibold, Sebastian; Brandl, Roland; Buse, Jörn; Hothorn, Torsten; Schmidl, Jürgen; Thorn, Simon; Müller, Jörg

    2015-04-01

    To reduce future loss of biodiversity and to allocate conservation funds effectively, the major drivers behind large-scale extinction processes must be identified. A promising approach is to link the red-list status of species and specific traits that connect species of functionally important taxa or guilds to resources they rely on. Such traits can be used to detect the influence of anthropogenic ecosystem changes and conservation efforts on species, which allows for practical recommendations for conservation. We modeled the German Red List categories as an ordinal index of extinction risk of 1025 saproxylic beetles with a proportional-odds linear mixed-effects model for ordered categorical responses. In this model, we estimated fixed effects for intrinsic traits characterizing species biology, required resources, and distribution with phylogenetically correlated random intercepts. The model also allowed predictions of extinction risk for species with no red-list category. Our model revealed a higher extinction risk for lowland and large species as well as for species that rely on wood of large diameter, broad-leaved trees, or open canopy. These results mirror well the ecological degradation of European forests over the last centuries caused by modern forestry, that is the conversion of natural broad-leaved forests to dense conifer-dominated forests and the loss of old growth and dead wood. Therefore, conservation activities aimed at saproxylic beetles in all types of forests in Central and Western Europe should focus on lowlands, and habitat management of forest stands should aim at increasing the amount of dead wood of large diameter, dead wood of broad-leaved trees, and dead wood in sunny areas.

  18. Hippocampus NMDA receptors selectively mediate latent extinction of place learning.

    Science.gov (United States)

    Goodman, Jarid; Gabriele, Amanda; Packard, Mark G

    2016-09-01

    Extinction of maze learning may be achieved with or without the animal performing the previously acquired response. In typical "response extinction," animals are given the opportunity to make the previously acquired approach response toward the goal location of the maze without reinforcement. In "latent extinction," animals are not given the opportunity to make the previously acquired response and instead are confined to the previous goal location without reinforcement. Previous evidence indicates that the effectiveness of these protocols may depend on the type of memory being extinguished. Thus, one aim of the present study was to further examine the effectiveness of response and latent extinction protocols across dorsolateral striatum (DLS)-dependent response learning and hippocampus-dependent place learning tasks. In addition, previous neural inactivation experiments indicate a selective role for the hippocampus in latent extinction, but have not investigated the precise neurotransmitter mechanisms involved. Thus, the present study also examined whether latent extinction of place learning might depend on NMDA receptor activity in the hippocampus. In experiment 1, adult male Long-Evans rats were trained in a response learning task in a water plus-maze, in which animals were reinforced to make a consistent body-turn response to reach an invisible escape platform. Results indicated that response extinction, but not latent extinction, was effective at extinguishing memory in the response learning task. In experiment 2, rats were trained in a place learning task, in which animals were reinforced to approach a consistent spatial location containing the hidden escape platform. In experiment 2, animals also received intra-hippocampal infusions of the NMDA receptor antagonist 2-amino-5-phosphopentanoic acid (AP5; 5.0 or 7.5 ug/0.5 µg) or saline vehicle immediately before response or latent extinction training. Results indicated that both extinction protocols were

  19. Spontaneous recovery from extinction in the infant rat.

    Science.gov (United States)

    Revillo, D A; Paglini, M G; Arias, C

    2014-11-01

    Within the Pavlovian conditioning framework, extinction is a procedure in which, after conditioning, the conditioned stimulus (CS) is repeatedly presented without the unconditioned stimulus (US). During this procedure the conditioned response (CR) is gradually attenuated. It has been suggested that extinction during the early stages of ontogeny is a qualitatively different process from extinction in adulthood: during infancy, extinction may result in erasure of the memory, while during adulthood extinction involves new learning. This conclusion was supported by studies showing that renewal, reinstatement or spontaneous recovery procedures were not effective during infancy for recovering the CR once it had been extinguished. These studies used the freezing response as the only behavioral index, although some recent evidence indicates that the absence of freezing after conditioning or after extinction does not necessarily imply a deficit in memory, and that other behavioral indexes may be more sensitive to detecting conditioning effects. The goal of the present study was to analyze extinction in preweanling rats by examining the possibility of the spontaneous recovery of a conditioned fear response, measured through a different set of mutually-exclusive behaviors that constitute an exhaustive ethogram, and including control groups (Experiment 1: US-Only and CS-Only; Experiment 2: US-Only, CS-Only and Unpaired) in order to examine whether non-associative learning may explain quantitative or qualitative changes in the frequency of specific responses during extinction or recovery. Extinction produced changes in the expression of freezing, grooming and exploration, and the clearest evidence of spontaneous recovery came from the analysis of freezing behavior. The pattern of behavior observed during extinction is compatible with theoretical approaches which consider different dynamic behavioral systems, and it also fit in well with a molar approach to the analysis of

  20. Can we avoid the Sixth Mass Extinction? Setting today's extinction crisis in the context of the Big Five

    Science.gov (United States)

    Barnosky, A. D.

    2012-12-01

    While the ultimate extinction driver now—Homo sapiens—is unique with respect to the drivers of past extinctions, comparison of parallel neontological and paleontological information helps calibrate how far the so-called Sixth Mass Extinction has progressed and whether it is inevitable. Such comparisons document that rates of extinction today are approaching or exceeding those that characterized the Big Five Mass Extinctions. Continuation of present extinction rates for vertebrates, for example, would result in 75% species loss—the minimum benchmark exhibited in the Big Five extinctions—within 3 to 22 centuries, assuming constant rates of loss and no threshold effects. Preceding and during each of the Big Five, the global ecosystem experienced major changes in climate, atmospheric chemisty, and ocean chemistry—not unlike what is being observed presently. Nevertheless, only 1-2% of well-assessed modern species have been lost over the past five centuries, still far below what characterized past mass extinctions in the strict paleontological sense. For mammals, adding in the end-Pleistocene species that died out would increase the species-loss percentage by some 5%. If threatened vertebrate species were to actually go extinct, losses would rise to between 14 and 40%, depending on the group. Such observations highlight that, although many species have already had their populations drastically reduced to near-critical levels, the Sixth Mass Extinction has not yet progressed to the point where it is unavoidable. Put another way, the vast majority of species that have occupied the world in concert with Homo sapiens are still alive and are possible to save. That task, however, will require slowing the abnormally high extinction rates that are now in progress, which in turn requires unified efforts to cap human population growth, decrease the average human footprint, reduce fossil fuel use while simultaneously increasing clean energy technologies, integrate

  1. Extinction pattern of reef ecosystems in latest Permian

    Institute of Scientific and Technical Information of China (English)

    WU YaSheng; FAN JiaSong; JIANG HongXia; YANG Wan

    2007-01-01

    Studies of two Permian-Triassic boundary (PTB) sections on top of a Changhsingian reef in Ziyun, Guizhou Province, southwestern China indicate that the end-Permian mass extinction of reef ecosystems occurred in two steps. The first step is the extinction of all stenotropic organisms such as calcisponges and fusulinids in the latest Permian (in the Clarkina yini conodont zone). The biota after the first extinction is simple, comprising eurytropic organisms including microgastropods, ostracods, and some small burrowing organisms, or only algal mats. At the beginning of the Early Triassic (I.e. the beginning of the Hindeodus parvus zone), the environments became anoxic, and the microgastropod dominated biota or algal mats disappeared, which constituted the second episode of the mass extinction. The biota after the second extinction comprises small spherical microproblematica, some kinds of specialized organisms tolerant of anoxic or oxygen-poor conditions. As the environments became oxygenated, the specialized biota was replaced by a microgastropod-dominated simple biota. When the environmental conditions improved further, the simple biota was replaced by a diverse biota with normal-sized ammonoids, bivalves, and gastropods, representing restoration of normal oceanic conditions. Comparison with PTB sections in Dolomites, Italy and Meishan, Zhejiang Province shows that non-reef ecosystems had a similar first episode of mass extinction in the latest Permian. In the case that oceanic anoxia happened, non-reef ecosystems had a second extinction episode similar to that of reef ecosystems.

  2. ON GALACTIC DENSITY MODELING IN THE PRESENCE OF DUST EXTINCTION

    Energy Technology Data Exchange (ETDEWEB)

    Bovy, Jo [Department of Astronomy and Astrophysics, University of Toronto, 50 St. George Street, Toronto, ON, M5S 3H4 (Canada); Rix, Hans-Walter; Schlafly, Edward F. [Max-Planck-Institut für Astronomie, Königstuhl 17, D-69117 Heidelberg (Germany); Green, Gregory M.; Finkbeiner, Douglas P., E-mail: bovy@astro.utoronto.ca [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States)

    2016-02-20

    Inferences about the spatial density or phase-space structure of stellar populations in the Milky Way require a precise determination of the effective survey volume. The volume observed by surveys such as Gaia or near-infrared spectroscopic surveys, which have good coverage of the Galactic midplane region, is highly complex because of the abundant small-scale structure in the three-dimensional interstellar dust extinction. We introduce a novel framework for analyzing the importance of small-scale structure in the extinction. This formalism demonstrates that the spatially complex effect of extinction on the selection function of a pencil-beam or contiguous sky survey is equivalent to a low-pass filtering of the extinction-affected selection function with the smooth density field. We find that the angular resolution of current 3D extinction maps is sufficient for analyzing Gaia sub-samples of millions of stars. However, the current distance resolution is inadequate and needs to be improved by an order of magnitude, especially in the inner Galaxy. We also present a practical and efficient method for properly taking the effect of extinction into account in analyses of Galactic structure through an effective selection function. We illustrate its use with the selection function of red-clump stars in APOGEE using and comparing a variety of current 3D extinction maps.

  3. Sexual selection affects local extinction and turnover in bird communities

    Science.gov (United States)

    Doherty, P.F.; Sorci, G.; Royle, J. Andrew; Hines, J.E.; Nichols, J.D.; Boulinier, T.

    2003-01-01

    Predicting extinction risks has become a central goal for conservation and evolutionary biologists interested in population and community dynamics. Several factors have been put forward to explain risks of extinction, including ecological and life history characteristics of individuals. For instance, factors that affect the balance between natality and mortality can have profound effects on population persistence. Sexual selection has been identified as one such factor. Populations under strong sexual selection experience a number of costs ranging from increased predation and parasitism to enhanced sensitivity to environmental and demographic stochasticity. These findings have led to the prediction that local extinction rates should be higher for species/populations with intense sexual selection. We tested this prediction by analyzing the dynamics of natural bird communities at a continental scale over a period of 21 years (1975-1996), using relevant statistical tools. In agreement with the theoretical prediction, we found that sexual selection increased risks of local extinction (dichromatic birds had on average a 23% higher local extinction rate than monochromatic species). However, despite higher local extinction probabilities, the number of dichromatic species did not decrease over the period considered in this study. This pattern was caused by higher local turnover rates of dichromatic species, resulting in relatively stable communities for both groups of species. Our results suggest that these communities function as metacommunities, with frequent local extinctions followed by colonization. Anthropogenic factors impeding dispersal might therefore have a significant impact on the global persistence of sexually selected species.

  4. Extinction and spontaneous recovery of spatial behavior in pigeons.

    Science.gov (United States)

    Leising, Kenneth J; Wong, Jared; Blaisdell, Aaron P

    2015-10-01

    We investigated extinction and spontaneous recovery of spatial associations using a landmark-based appetitive search task in a touchscreen preparation with pigeons. Four visual landmarks (A, B, C, and D) were separately established as signals of a hidden reinforced target among an 8 × 7 array of potential target locations. The target was located above landmarks (LM) A and C and below B and D. After conditioning, A and B were extinguished. Responding to A and C was assessed on probe tests 2 days following extinction, whereas, B and D were tested 14 days after extinction. We observed spontaneous recovery from spatial extinction following a 14-day, but not a 2-day, postextinction retention interval. Furthermore, by plotting the spatial distribution of responding across the X and Y axes during testing, we found that spontaneous recovery of responding to the target in our task was due to enhanced spatial control (i.e., a change in the overall distribution of responses) following the long delay to testing. These results add spatial extinction and spontaneous recovery to the list of findings supporting the assertion that extinction involves new learning that attenuates the originally acquired response, and that original learning of the spatial relationship between paired events survives extinction. (PsycINFO Database Record

  5. Probing the Role of Carbon in the Interstellar Ultraviolet Extinction

    CERN Document Server

    Mishra, Ajay

    2015-01-01

    We probe the role of carbon in the ultraviolet (UV) extinction by examining the relations between the amount of carbon required to be locked up in dust [C/H]_dust with the 2175 Angstrom extinction bump and the far-UV extinction rise, based on an analysis of the extinction curves along 16 Galactic sightlines for which the gas-phase carbon abundance is known and the 2175 Angstrom extinction bump exhibits variable strengths and widths. We derive [C/H]_dust from the Kramers-Kronig relation which relates the wavelength-integrated extinction to the total dust volume. This approach is less model-dependent since it does not require the knowledge of the detailed optical properties and size distribution of the dust. We also derive [C/H]_dust from fitting the observed UV/optical/near-infrared extinction with a mixture of amorphous silicate and graphite. We find that the carbon depletion [C/H]_dust tends to correlate with the strength of the 2175 Angstrom bump, while the abundance of silicon depleted in dust shows no cor...

  6. Determining the extragalactic extinction law with SALT. II. Additional sample

    CERN Document Server

    Finkelman, Ido; Kniazev, Alexei Y; Vaisanen, Petri; Buckley, David A H; O'Donoghue, Darragh; Gulbis, Amanda; Hashimoto, Yas; Loaring, Nicola; Romero-Colmenero, Encarni; Sefako, Ramotholo

    2010-01-01

    We present new results from an on-going programme to study the dust extragalactic extinction law in E/S0 galaxies with dust lanes with the Southern African Large Telescope (SALT) during its performance-verification phase. The wavelength dependence of the dust extinction for seven galaxies is derived in six spectral bands ranging from the near-ultraviolet atmospheric cutoff to the near-infrared. The derivation of an extinction law is performed by fitting model galaxies to the unextinguished parts of the image in each spectral band, and subtracting from these the actual images. We compare our results with the derived extinction law in the Galaxy and find them to run parallel to the Galactic extinction curve with a mean total-to-selective extinction value of 2.71+-0.43. We use total optical extinction values to estimate the dust mass for each galaxy, compare these with dust masses derived from IRAS measurements, and find them to range from 10^4 to 10^7 Solar masses. We study the case of the well-known dust-lane ...

  7. Probing the Role of Carbon in the Interstellar Ultraviolet Extinction

    Science.gov (United States)

    Mishra, Ajay; Li, Aigen

    2015-08-01

    We probe the role of carbon in the ultraviolet (UV) extinction by examining the relations between the amount of carbon required to be locked up in dust {[{{C}}/{{H}}]}{dust} with the 2175 \\mathringA extinction bump and the far-UV extinction rise, based on an analysis of the extinction curves along 16 Galactic sightlines for which the gas-phase carbon abundance is known and the 2175 \\mathringA extinction bump exhibits variable strengths and widths. We derive {[{{C}}/{{H}}]}{dust} from the Kramers-Kronig relation which relates the wavelength-integrated extinction to the total dust volume. This approach is less model-dependent since it does not require the knowledge of the detailed optical properties and size distribution of the dust.We also derive {[{{C}}/{{H}}]}{dust} from fitting the observed UV/optical/near-infrared extinction with a mixture of amorphous silicate and graphite. We find that the carbon depletion {[{{C}}/{{H}}]}{dust} tends to correlate with the strength of the 2175 \\mathringA bump, while the abundance of silicon depleted in dust shows no correlation with the 2175 \\mathringA bump. This supports graphite or polycyclic aromatic hydrocarbon molecules as the possible carrier of the 2175 \\mathringA bump. We also see that {[{{C}}/{{H}}]}{dust} shows a trend of correlating with 1/{R}V, where RV is the total-to-selective extinction ratio, suggesting that the far-UV extinction is more likely produced by small carbon dust than by small silicate dust.

  8. All biology is computational biology

    Science.gov (United States)

    2017-01-01

    Here, I argue that computational thinking and techniques are so central to the quest of understanding life that today all biology is computational biology. Computational biology brings order into our understanding of life, it makes biological concepts rigorous and testable, and it provides a reference map that holds together individual insights. The next modern synthesis in biology will be driven by mathematical, statistical, and computational methods being absorbed into mainstream biological training, turning biology into a quantitative science. PMID:28278152

  9. Extinction and retrieval+extinction of conditioned fear differentially activate medial prefrontal cortex and amygdala in rats

    Directory of Open Access Journals (Sweden)

    Hongjoo Joanne Lee

    2016-01-01

    Full Text Available Pairing a previously neutral conditioned stimulus (CS; e.g., a tone to an aversive unconditioned stimulus (US; e.g., a footshock leads to associative learning such that the tone alone comes to elicit a conditioned response (e.g., freezing. We have previously shown that an extinction session that occurs within the reconsolidation window (termed retrieval+extinction attenuates fear responding and prevents the return of fear in Pavlovian fear conditioning (Monfils et al., 2009. To date, the mechanisms that explain the different behavioral outcomes between standard extinction and retrieval+extinction remain poorly understood. Here we sought to examine the differential temporal engagement of specific neural systems by these 2 approaches using Arc catFISH (cellular compartment analysis of temporal activity using fluorescence in situ hybridization. Our results demonstrate that extinction and retrieval+extinction lead to differential patterns of expression, suggesting that they engage different networks. These findings provide insight into the neural mechanisms that allow extinction during reconsolidation to prevent the return of fear in rats.

  10. Preventing return of fear in an animal model of anxiety: additive effects of massive extinction and extinction in multiple contexts.

    Science.gov (United States)

    Laborda, Mario A; Miller, Ralph R

    2013-06-01

    Fear conditioning and experimental extinction have been presented as models of anxiety disorders and exposure therapy, respectively. Moreover, the return of fear serves as a model of relapse after exposure therapy. Here we present two experiments, with rats as subjects in a lick suppression preparation, in which we assessed the additive effects of two different treatments to attenuate the return of fear. First, we evaluated whether two phenomena known to generate return of fear (i.e., spontaneous recovery and renewal) summate to produce a stronger reappearance of extinguished fear. At test, rats evaluated outside the extinction context following a long delay after extinction (i.e., a delayed context shift) exhibited greater return of extinguished fear than rats evaluated outside the extinction context alone, but return of extinguished fear following a delayed context shift did not significantly differ from the return of fear elicited in rats tested following a long delay after extinction alone. Additionally, extinction in multiple contexts and a massive extinction treatment each attenuated the strong return of fear produced by a delayed context shift. Moreover, the conjoint action of these treatments was significantly more successful in preventing the reappearance of extinguished fear, suggesting that extensive cue exposure administered in several different therapeutic settings has the potential to reduce relapse after therapy for anxiety disorders, more than either manipulation alone.

  11. The dynamics of conditioning and extinction.

    Science.gov (United States)

    Killeen, Peter R; Sanabria, Federico; Dolgov, Igor

    2009-10-01

    Pigeons responded to intermittently reinforced classical conditioning trials with erratic bouts of responding to the conditioned stimulus. Responding depended on whether the prior trial contained a peck, food, or both. A linear persistence-learning model moved pigeons into and out of a response state, and a Weibull distribution for number of within-trial responses governed in-state pecking. Variations of trial and intertrial durations caused correlated changes in rate and probability of responding and in model parameters. A novel prediction--in the protracted absence of food, response rates can plateau above zero--was validated. The model predicted smooth acquisition functions when instantiated with the probability of food but a more accurate jagged learning curve when instantiated with trial-to-trial records of reinforcement. The Skinnerian parameter was dominant only when food could be accelerated or delayed by pecking. These experiments provide a framework for trial-by-trial accounts of conditioning and extinction that increases the information available from the data, permitting such accounts to comment more definitively on complex contemporary models of momentum and conditioning.

  12. Are Isolated Indigenous Populations Headed toward Extinction?

    Directory of Open Access Journals (Sweden)

    Robert S Walker

    Full Text Available At least 50 indigenous groups spread across lowland South America remain isolated and have only intermittent and mostly hostile interactions with the outside world. Except in emergency situations, the current policy of governments in Brazil, Colombia, and Peru towards isolated tribes is a "leave them alone" strategy, in which isolated groups are left uncontacted. However, these no-contact policies are based on the assumption that isolated populations are healthy and capable of persisting in the face of mounting external threats, and that they can maintain population viability in the long-term. Here, we test this assumption by tracking the sizes and movements of cleared horticultural areas made by 8 isolated groups over the last 10-14 years. We used deforestation data derived from remote sensing Landsat satellite sensors to identify clearings, and those were then validated and assessed with high-resolution imagery. We found only a single example of a relatively large and growing population (c. 50 cleared ha and 400 people, whereas all of the other 7 groups exhibited much smaller villages and gardens with no sizable growth through time. These results indicated that the smaller groups are critically endangered, and it prompts an urgent re-thinking of policies toward isolated populations, including plans for well-organized contacts that may help save lives and rescue isolated indigenous populations from imminent extinction.

  13. Life Extinctions due to Neutron Star Mergers

    CERN Document Server

    Dar, Arnon; Shaviv, N J; Dar, Arnon; Laor, Ari; Shaviv, Nir J.

    1996-01-01

    In a recent paper, Shaviv and Dar have shown that highly relativistic ejecta of high Z material from merger or accretion induced collapse of neutron stars can boost and beam star-light in dense stellar regions into cosmological gamma ray bursts (GRBs) whose predicted properties reproduce remarkably well the observed properties of GRBs. Generally, only a small fraction of the relativistic kinetic energy of the ejecta is converted into gamma rays and most of it is injected into the interstellar medium as a very powerful cosmic ray burst (CRB). Here we show that such CRBs can extinct life on Earth-like planets if they are closer than $\\sim 1 ~kpc$ from the merger/explosion. Such CRBs produce lethal fluxes of atmospheric muons at ground, underground and underwater. They also destroy the ozone layer, radioactivate the atmosphere and the surface of the planet and induce large climatic changes. They are enormously more violent than the GRBs alone or supernova explosions. In Milky-Way like galaxies they destroy life ...

  14. Mammal extinctions in the Vallesian (Upper Miocene)

    Science.gov (United States)

    Agusti, J.; Moya-Sola, S.

    The term Vallesian was created by Crusafont (1950) to designate the first European Mammalian palaeofaunas containing the equid Hipparion, the remainder of the faunas being composed of typical elements coming from the Middle Miocene such as Micromeryx, Euprox, Sansanosmilus, Pseudaelurus, and Listriodon. Thus, the Aragonian-Vallesian boundary does not show a strong change among European Miocene mammalian faunas (Agusti et al., 1984). On the other hand, the Lower Vallesian/Upper Vallesian transition corresponds to a major biotic crisis. This boudnary is characterized by the disappearence of most of the Aragonian artiodactyl forms such as Protragocerus, Miotragocerus, Listriodon, Hyotherium, Parachleusastochoerus, etc. Among the rodents, this crisis affects the family Eomyidae and most of the cricetid and glirid species. On the other hand, a number of eastern elements appear in the area at the same time. This is the case of the suid Schizochoerus and the murid Progonomys. Other eastern forms are Tragoportax, Graecoryx, Adcrocuta, Paramachairodus, Microstonyx, etc. Most of these are typical elements of the next Mammal stage, the Turolian. Thus, whereas the Lower Vallesian fauna has a typical Aragonian composition except for Hipparion. After the Middle Vallesian event, the Upper Vallesian faunas are already largely Turolian in character. The possible factors involved in this extinction event are discussed.

  15. Partial reinforcement, extinction, and placebo analgesia.

    Science.gov (United States)

    Au Yeung, Siu Tsin; Colagiuri, Ben; Lovibond, Peter F; Colloca, Luana

    2014-06-01

    Numerous studies indicate that placebo analgesia can be established via conditioning procedures. However, these studies have exclusively involved conditioning under continuous reinforcement. Thus, it is currently unknown whether placebo analgesia can be established under partial reinforcement and how durable any such effect would be. We tested this possibility using electrocutaneous pain in healthy volunteers. Sixty undergraduates received placebo treatment (activation of a sham electrode) under the guise of an analgesic trial. The participants were randomly allocated to different conditioning schedules, namely continuous reinforcement (CRF), partial reinforcement (PRF), or control (no conditioning). Conditioning was achieved by surreptitiously reducing pain intensity during training when the placebo was activated compared with when it was inactive. For the CRF group, the placebo was always followed by a surreptitious reduction in pain during training. For the PRF group, the placebo was followed by a reduction in pain stimulation on 62.5% of trials only. In the test phase, pain stimulation was equivalent across placebo and no placebo trials. Both CRF and PRF produced placebo analgesia, with the magnitude of initial analgesia being larger after CRF. However, although the placebo analgesia established under CRF extinguished during test phase, the placebo analgesia established under PRF did not. These findings indicate that PRF can induce placebo analgesia and that these effects are more resistant to extinction than those established via CRF. PRF may therefore reflect a novel way of enhancing clinical outcomes via the placebo effect.

  16. Giant comets and mass extinctions of life

    Science.gov (United States)

    Napier, W. M.

    2015-03-01

    I find evidence for clustering in age of well-dated impact craters over the last 500 Myr. At least nine impact episodes are identified, with durations whose upper limits are set by the dating accuracy of the craters. Their amplitudes and frequency are inconsistent with an origin in asteroid breakups or Oort cloud disturbances, but are consistent with the arrival and disintegration in near-Earth orbits of rare, giant comets, mainly in transit from the Centaur population into the Jupiter family and Encke regions. About 1 in 10 Centaurs in Chiron-like orbits enter Earth-crossing epochs, usually repeatedly, each such epoch being generally of a few thousand years' duration. On time-scales of geological interest, debris from their breakup may increase the mass of the near-Earth interplanetary environment by two or three orders of magnitude, yielding repeated episodes of bombardment and stratospheric dusting. I find a strong correlation between these bombardment episodes and major biostratigraphic and geological boundaries, and propose that episodes of extinction are most effectively driven by prolonged encounters with meteoroid streams during bombardment episodes. Possible mechanisms are discussed.

  17. Noradrenergic stimulation modulates activation of extinction-related brain regions and enhances contextual extinction learning without affecting renewal

    Directory of Open Access Journals (Sweden)

    Silke eLissek

    2015-02-01

    Full Text Available Renewal in extinction learning describes the recovery of an extinguished response if the extinction context differs from the context present during acquisition and recall. Attention may have a role in contextual modulation of behavior and contribute to the renewal effect, while noradrenaline is involved in attentional processing. In this functional magnetic resonance imaging (fMRI study we investigated the role of the noradrenergic system for behavioral and brain activation correlates of contextual extinction and renewal, with a particular focus upon hippocampus and ventromedial PFC, which have crucial roles in processing of renewal. Healthy human volunteers received a single dose of the NA reuptake inhibitor atomoxetine prior to extinction learning. During extinction of previously acquired cue-outcome associations, cues were presented in a novel context (ABA or in the acquisition context (AAA. In recall, all cues were again presented in the acquisition context. Atomoxetine participants (ATO showed significantly faster extinction compared to placebo (PLAC. However, atomoxetine did not affect renewal. Hippocampal activation was higher in ATO during extinction and recall, as was ventromedial PFC activation, except for ABA recall. Moreover, ATO showed stronger recruitment of insula, anterior cingulate, and dorsolateral/orbitofrontal PFC. Across groups, cingulate, hippocampus and vmPFC activity during ABA extinction correlated with recall performance, suggesting high relevance of these regions for processing the renewal effect. In summary, the noradrenergic system appears to be involved in the modification of established associations during extinction learning and thus has a role in behavioral flexibility. The assignment of an association to a context and the subsequent decision on an adequate response, however, presumably operate largely independently of noradrenergic mechanisms.

  18. Impending extinction crisis of the world’s primates: Why primates matter

    Science.gov (United States)

    Estrada, Alejandro; Garber, Paul A.; Rylands, Anthony B.; Roos, Christian; Fernandez-Duque, Eduardo; Di Fiore, Anthony; Nekaris, K. Anne-Isola; Nijman, Vincent; Heymann, Eckhard W.; Lambert, Joanna E.; Rovero, Francesco; Barelli, Claudia; Setchell, Joanna M.; Gillespie, Thomas R.; Mittermeier, Russell A.; Arregoitia, Luis Verde; de Guinea, Miguel; Gouveia, Sidney; Dobrovolski, Ricardo; Shanee, Sam; Shanee, Noga; Boyle, Sarah A.; Fuentes, Agustin; MacKinnon, Katherine C.; Amato, Katherine R.; Meyer, Andreas L. S.; Wich, Serge; Sussman, Robert W.; Pan, Ruliang; Kone, Inza; Li, Baoguo

    2017-01-01

    Nonhuman primates, our closest biological relatives, play important roles in the livelihoods, cultures, and religions of many societies and offer unique insights into human evolution, biology, behavior, and the threat of emerging diseases. They are an essential component of tropical biodiversity, contributing to forest regeneration and ecosystem health. Current information shows the existence of 504 species in 79 genera distributed in the Neotropics, mainland Africa, Madagascar, and Asia. Alarmingly, ~60% of primate species are now threatened with extinction and ~75% have declining populations. This situation is the result of escalating anthropogenic pressures on primates and their habitats—mainly global and local market demands, leading to extensive habitat loss through the expansion of industrial agriculture, large-scale cattle ranching, logging, oil and gas drilling, mining, dam building, and the construction of new road networks in primate range regions. Other important drivers are increased bushmeat hunting and the illegal trade of primates as pets and primate body parts, along with emerging threats, such as climate change and anthroponotic diseases. Often, these pressures act in synergy, exacerbating primate population declines. Given that primate range regions overlap extensively with a large, and rapidly growing, human population characterized by high levels of poverty, global attention is needed immediately to reverse the looming risk of primate extinctions and to attend to local human needs in sustainable ways. Raising global scientific and public awareness of the plight of the world’s primates and the costs of their loss to ecosystem health and human society is imperative. PMID:28116351

  19. Effects of overtraining on extinction in newts (Cynops pyrrhogaster).

    Science.gov (United States)

    Shibasaki, Masahiro; Ishida, Masato

    2012-11-01

    The overtraining extinction effect (OEE), a phenomenon in which extended training facilitates extinction, has been found in mammals and reptiles. However, fish have never shown OEE. No study has yet investigated OEE in newts, a representative amphibian species. We tested whether newts, Cynops pyrrhogaster, show OEE in a straight-array task. All animals received five trials per day and were given a piece of dried worm during reinforced trials. They showed significant acquisition and extinction effects in reinforced and nonreinforced trials. However, we found no difference in extinction performance between a group with 25-trial acquisition and one with 75-trial acquisition, suggesting that OEE was not found in newts. OEE has generally been explained in terms of frustration-related mechanisms. Our results suggest that emotional reactions to nonreward, such as frustration, may not influence behavior in amphibians.

  20. Opioid receptors regulate the extinction of Pavlovian fear conditioning.

    Science.gov (United States)

    McNally, Gavan P; Westbrook, R Frederick

    2003-12-01

    Rats received a single pairing of an auditory conditioned stimulus (CS) with a footshock unconditioned stimulus (US). The fear (freezing) that had accrued to the CS was then extinguished. Injection of naloxone prior to this extinction significantly impaired the development of extinction. This impairment was mediated by opioid receptors in the brain and was not observed when naloxone was injected after extinction training. Finally, an injection of naloxone on test failed to reinstate extinguished responding that had already accrued to the CS. These experiments show that opioid receptors regulate the development, but not the expression, of fear extinction and are discussed with reference to the roles of opioid receptors in US processing, memory, and appetitive motivation.

  1. The aftermath of megafaunal extinction: ecosystem transformation in Pleistocene Australia.

    Science.gov (United States)

    Rule, Susan; Brook, Barry W; Haberle, Simon G; Turney, Chris S M; Kershaw, A Peter; Johnson, Christopher N

    2012-03-23

    Giant vertebrates dominated many Pleistocene ecosystems. Many were herbivores, and their sudden extinction in prehistory could have had large ecological impacts. We used a high-resolution 130,000-year environmental record to help resolve the cause and reconstruct the ecological consequences of extinction of Australia's megafauna. Our results suggest that human arrival rather than climate caused megafaunal extinction, which then triggered replacement of mixed rainforest by sclerophyll vegetation through a combination of direct effects on vegetation of relaxed herbivore pressure and increased fire in the landscape. This ecosystem shift was as large as any effect of climate change over the last glacial cycle, and indicates the magnitude of changes that may have followed megafaunal extinction elsewhere in the world.

  2. Extinction order and altered community structure rapidly disrupt ecosystem functioning.

    Science.gov (United States)

    Larsen, Trond H; Williams, Neal M; Kremen, Claire

    2005-05-01

    By causing extinctions and altering community structure, anthropogenic disturbances can disrupt processes that maintain ecosystem integrity. However, the relationship between community structure and ecosystem functioning in natural systems is poorly understood. Here we show that habitat loss appeared to disrupt ecosystem functioning by affecting extinction order, species richness and abundance. We studied pollination by bees in a mosaic of agricultural and natural habitats in California and dung burial by dung beetles on recently created islands in Venezuela. We found that large-bodied bee and beetle species tended to be both most extinction-prone and most functionally efficient, contributing to rapid functional loss. Simulations confirmed that extinction order led to greater disruption of function than predicted by random species loss. Total abundance declined with richness and also appeared to contribute to loss of function. We demonstrate conceptually and empirically how the non-random response of communities to disturbance can have unexpectedly large functional consequences.

  3. High extinction amplitude modulation in ultrashort pulse shaping

    CERN Document Server

    Lin, Yen-Wei

    2016-01-01

    We explored the issues related to the resolution and the modulation extinction when filtering the spectrum of a UV femtosecond laser with a standard ultrashort pulse shaper. We have learned that a higher pulse shaping resolution often requires a larger working beam size or a higher density grating for greater dispersion. However, these approaches also introduce more optical errors and degrade the extinction. In this work, we examined specifics of each component to determine the best configuration of our spectral filtering setup. As a proof-of-concept demonstration, we utilized elements available as standard products and achieved 100 GHz filtering resolution with high extinction at the UV-A wavelength, which is superb in this wavelength range. The high extinction spectral filtering is especially important while modifying a broadband laser for the optical control of molecule's internal state.

  4. Observational evidence of dust evolution in galactic extinction curves

    Energy Technology Data Exchange (ETDEWEB)

    Cecchi-Pestellini, Cesare [INAF-Osservatorio Astronomico di Palermo, P.zza Parlamento 1, I-90134 Palermo (Italy); Casu, Silvia; Mulas, Giacomo [INAF-Osservatorio Astronomico di Cagliari, Via della Scienza, I-09047 Selargius (Italy); Zonca, Alberto, E-mail: cecchi-pestellini@astropa.unipa.it, E-mail: silvia@oa-cagliari.inaf.it, E-mail: gmulas@oa-cagliari.inaf.it, E-mail: azonca@oa-cagliari.inaf.it [Dipartimento di Fisica, Università di Cagliari, Strada Prov.le Monserrato-Sestu Km 0.700, I-09042 Monserrato (Italy)

    2014-04-10

    Although structural and optical properties of hydrogenated amorphous carbons are known to respond to varying physical conditions, most conventional extinction models are basically curve fits with modest predictive power. We compare an evolutionary model of the physical properties of carbonaceous grain mantles with their determination by homogeneously fitting observationally derived Galactic extinction curves with the same physically well-defined dust model. We find that a large sample of observed Galactic extinction curves are compatible with the evolutionary scenario underlying such a model, requiring physical conditions fully consistent with standard density, temperature, radiation field intensity, and average age of diffuse interstellar clouds. Hence, through the study of interstellar extinction we may, in principle, understand the evolutionary history of the diffuse interstellar clouds.

  5. Evolution and extinction dynamics in rugged fitness landscapes

    CERN Document Server

    Brandt, P S M; Brandt, Paolo Sibani Michael; Alstroem, Preben

    1997-01-01

    Macroevolution is considered as a problem of stochastic dynamics in a system with many competing agents. Evolutionary events (speciations and extinctions) are triggered by fitness records found by random exploration of the agents' fitness landscapes. As a consequence, the average fitness in the system increases logarithmically with time, while the rate of extinction steadily decreases. This dynamics is studied by numerical simulations and, in a simpler mean field version, analytically. We also study the effect of externally added `mass' extinctions. The predictions for various quantities of paleontological interest (life-time distributions, distribution of event sizes and behavior of the rate of extinction) are robust and in good agreement with available data. Brief version of parts of this work have been published as Letters. (PRL 75, 2055, (1995) and PRL, 79, 1413, (1997))

  6. How the Red Queen drives terrestrial mammals to extinction.

    Science.gov (United States)

    Quental, Tiago B; Marshall, Charles R

    2013-07-19

    Most species disappear by the processes of background extinction, yet those processes are poorly understood. We analyzed the evolutionary dynamics of 19 Cenozoic terrestrial mammalian clades with rich fossil records that are now fully extinct or in diversity decline. We find their diversity loss was not just a consequence of "gamblers ruin" but resulted from the evolutionary loss to the Red Queen, a failure to keep pace with a deteriorating environment. Diversity loss is driven equally by both depressed origination rates and elevated extinction rates. Although we find diversity-dependent origination and extinction rates, the diversity of each clade only transiently equaled the implied equilibrium diversity. Thus, the processes that drove diversity loss in terrestrial mammal clades were fundamentally nonequilibrial and overwhelmed diversity-dependent processes.

  7. Combining stimulus fading, reinforcement, and extinction to treat food refusal.

    OpenAIRE

    Freeman, K A; Piazza, C C

    1998-01-01

    The food refusal of a 6-year-old girl with destructive behavior was treated using stimulus fading, reinforcement, and escape extinction. Intake increased and compliance with prompting procedures remained relatively stable despite the increased consumption requirement.

  8. Three-dimensional extinction mapping using Gaussian random fields

    CERN Document Server

    Sale, S E

    2014-01-01

    We present a scheme for using stellar catalogues to map the three-dimensional distributions of extinction and dust within our Galaxy. Extinction is modelled as a Gaussian random field, whose covariance function is set by a simple physical model of the ISM that assumes a Kolmogorov-like power spectrum of turbulent fluctuations. As extinction is modelled as a random field, the spatial resolution of the resulting maps is set naturally by the data available; there is no need to impose any spatial binning. We verify the validity of our scheme by testing it on simulated extinction fields and show that its precision is significantly improved over previous dust-mapping efforts. The approach we describe here can make use of any photometric, spectroscopic or astrometric data; it is not limited to any particular survey. Consequently, it can be applied to a wide range of data from both existing and future surveys.

  9. Stochastic extinction of viral infectivity through the action of defectors

    Science.gov (United States)

    Iranzo, J.; Manrubia, S. C.

    2009-01-01

    The high error rates of RNA viruses at replication suggest they might be close to the extinction threshold predicted by quasispecies theory. Hence, moderate increases in the mutation rate could drive them to extinction. In persistent infections of an RNA virus treated with a mutagen, it has been observed that infectivity eventually disappears, although the replicative ability of the virus is not affected. By means of a simple model that takes into account two phenotypic traits, we demonstrate that extinction is a purely stochastic phenomenon caused by the intermittent outbreaks of a defective, non-infective subpopulation. The transition between dynamics dominated by population fluctuations (finite system size N) and the mean-field behavior (N→∞) is characterized. We discuss the implications of this alternative pathway to viral extinction.

  10. Experimental Analysis and Extinction of Self-Injurious Escape Behavior.

    Science.gov (United States)

    Iwata, Brian A.; And Others

    1990-01-01

    Three studies investigated environmental correlates of self-injurious behavior in seven developmentally disabled children and adolescents which were then later used for treatment. Correlates investigated included positive reinforcement, negative reinforcement, automatic reinforcement, and control. "Escape extinction" was successfully…

  11. Extinction risk assessment of the world’s seagrass species

    Digital Repository Service at National Institute of Oceanography (India)

    Short, F.T.; Polidoro, B.; Livingstone, S.R.; Carpenter, K.E.; Bandeira, S.; Bujang, J.S.; Calumpong, H.P.; Carruthers, T.J.B.; Coles, R.G.; Dennison, W.C.; Erftemeijer, P.L.A.; Fortes, M.D.; Freeman, A.S.; Jagtap, T.G.; Kamal, A.H.M.; Kendrick, G.A.; Kenworthy, W.J.; LaNafie, Y.A.; Nasution, I.M.; Orth, R.J.; Prathep, A.; Sanciangco, J.C.; Tussenbroek, B.V.; Vergara, S.G.; Waycott, M.; Zieman, J.C.

    studies have indicated that seagrass habitat is declining worldwide. Our focus is to determine the risk of extinction for individual seagrass species, a 4-year process involving seagrass experts internationally, compilation of data on species’ status...

  12. The Gaia-ESO Survey: Tracing interstellar extinction

    CERN Document Server

    Schultheis, M; Recio-Blanco, A; de Laverny, P; Hill, V; Gilmore, G; Alfaro, E J; Costado, M T; Bensby, T; Damiani, F; Feltzing, S; Flaccomio, E; Lardo, C; Jofre, P; Prisinzano, L; Zaggia, S; Jimenez-Esteban, F; Morbidelli, L; Lanzafame, A C; Hourihane, A; Worley, C; Francois, P

    2015-01-01

    Large spectroscopic surveys have enabled in the recent years the computation of three-dimensional interstellar extinction maps thanks to accurate stellar atmospheric parameters and line-of-sight distances. Such maps are complementary to 3D maps extracted from photometry, allowing a more thorough study of the dust properties. Our goal is to use the high-resolution spectroscopic survey Gaia-ESO in order to obtain with a good distance resolution the interstellar extinction and its dependency as a function of the environment and the Galactocentric position. We use the stellar atmospheric parameters of more than 5000 stars, obtained from the Gaia-ESO survey second internal data release, and combine them with optical (SDSS) and near-infrared (VISTA) photometry as well as different sets of theoretical stellar isochrones, in order to calculate line-of-sight extinction and distances. The extinction coefficients are then compared with the literature to discuss their dependancy on the stellar parameters and position in ...

  13. Persistence and Extinction in Two Species Models with Impulse

    Institute of Scientific and Technical Information of China (English)

    Xian Zhang WEN; Zhi Cheng WANG

    2006-01-01

    Both uniform persistence and global extinction are established for a two species predatorprey and competition system with impulse by appealing to theories of abstract persistence, asymptotically autonomous semiflows, and the comparison theorem.

  14. Scientists Rediscover a Rodent Thought to Be Extinct

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    @@ A rodent discovered last year in Laos may actually be a survivor of a group believed to have been extinct for 11 million years, an international group of scientists, including a CAS researcher, reported on March 9.

  15. Self-organized criticality, evolution and the fossil extinction record

    CERN Document Server

    Newman, M E J

    1996-01-01

    Statistical analysis indicates that the fossil extinction record is compatible with a distribution of extinction events whose frequency is related to their size by a power law with an exponent close to two. This result is in agreement with predictions based on self-organized critical models of extinction, and might well be taken as evidence of critical behaviour in terrestrial evolution. We argue however that there is a much simpler explanation for the appearance of a power law in terms of extinctions caused by stresses (either biotic or abiotic) to which species are subjected by their environment. We give an explicit model of this process and discuss its properties and implications for the interpretation of the fossil record.

  16. Power spectra of extinction in the fossil record

    CERN Document Server

    Newman, M E J; Eble, Gunther J.

    1998-01-01

    Recent Fourier analyses of fossil extinction data have indicated that the power spectrum of extinction during the Phanerozoic may take the form of 1/f noise, a result which, it has been suggested, could be indicative of the presence of "critical dynamics" in the processes giving rise to extinction. In this paper we examine extinction power spectra in some detail, using family-level data from a variety of different sources. We find that although the average form of the power spectrum roughly obeys the 1/f law, the spectrum can be represented more accurately by dividing it into two regimes: a low-frequency one which is well fit by an exponential, and a high-frequency one in which it follows a power law with a 1/f^2 form. We give explanations for the occurrence of each of these behaviours and for the position of the cross-over between them.

  17. Radiocarbon-dating and ancient DNA reveal rapid replacement of extinct prehistoric penguins

    Science.gov (United States)

    Rawlence, Nicolas J.; Perry, George L. W.; Smith, Ian W. G.; Scofield, R. Paul; Tennyson, Alan J. D.; Matisoo-Smith, Elizabeth A.; Boessenkool, Sanne; Austin, Jeremy J.; Waters, Jonathan M.

    2015-03-01

    Prehistoric faunal extinctions dramatically reshaped biological assemblages around the world. However, the timing of such biotic shifts is often obscured by the fragmentary nature and limited temporal resolution of fossil records. We use radiocarbon-dating and ancient-DNA analysis of prehistoric (ca A.D. 1450-1834) Megadyptes penguin specimens to assess the time-frame of biological turnover in coastal New Zealand following human settlement. These data suggest that the final extirpation of the endemic Megadyptes waitaha, and subsequent replacement by the previously sub-Antarctic-limited Megadyptes antipodes, likely occurred within a narrow temporal window (e.g. a century or less). This transition represents one of the most rapid prehistoric faunal turnover events documented, and is likely linked to human demographic and cultural transitions during the 15th Century. Our results suggest that anthropogenic forces can trigger rapid biogeographic shifts.

  18. A sudden end-Permian mass extinction (Invited)

    Science.gov (United States)

    Shen, S.

    2013-12-01

    The end-Permian mass extinction is the largest of the Phanerozoic. In the immediate aftermath the marine ecosystem was dominated by microbial and communities with disaster taxa. Plausible kill mechanism includes an extremely rapid, explosive release of gases such as carbon dioxide, methane and hydrogen sulfide. Siberian flood volcanism has been suggested as the most possible mechanism to trigger the massive release of greenhouse gases from volcanic eruptions and interaction of magmas with carbon from thick organic-rich deposits or rapid venting of coal-derived methane or massive combustion of coal. A sharp δ13C isotopic excursion, rapid disappearance of carbonate benthic communities and δ18O data from conodont apatite suggest rapid global warming. The end-Permian mass extinction occurred in less than 200,000 years. This extinction interval is constrained by two ash beds (Beds 25 and 28) at the Meishan section. However, the extinction patterns remain controversial largely due to the condensed nature of the Meishan sections. Geochemical signals and their interpretations are also contentious. Thus, the level of achievable stratigraphic resolution becomes crucial to determine the nature of the event and a detailed study of the extinction interval is essential to unravel the extinction pattern, chemostratigraphy, and the causes. However, the extinction interval at Meishan is only 26 cm thick and contains distinct gaps at the Permian-Triassic boundary (PTB) and possibly the base of Bed 25. Thus, it is impossible to resolve a detailed extinction pattern. Studying expanded sections is crucial to understand the detailed events before, during and after the main extinction. In this report, we show a highly-expanded Permian-Triassic boundary section in Guangxi Province, South China. The last 4.5 m between beds 22 and 28 of the Meishan sections is represented by a sequence of ~560 m at the section and the extinction interval between beds 24e and 28 at Meishan is represented

  19. Extinction rates under nonrandom patterns of habitat loss

    OpenAIRE

    Seabloom, Eric W.; Dobson, Andy P.; Stoms, David M.

    2002-01-01

    Most models that examine the effects of habitat conversion on species extinctions assume that habitat conversion occurs at random. This assumption allows predictions about extinction rates based on the species–area relationship. We show that the spatially aggregated nature of habitat conversion introduces a significant bias that may lead species-loss rates to exceed those predicted by species–area curves. Correlations between human activity and major compositional gradients, or species richne...

  20. Predation effects on mean time to extinction under demographic stochasticity

    OpenAIRE

    Palamara, Gian Marco; Delius, Gustav W.; Smith, Matthew J; Petchey, Owen L

    2012-01-01

    Methods for predicting the probability and timing of a species' extinction are typically based on a combination of theoretical models and empirical data, and focus on single species population dynamics. Of course, species also interact with each other, forming more or less complex networks of interactions. Models to assess extinction risk often lack explicit incorporation of these interspecific interactions. We study a birth and death process in which the death rate includes an effect from pr...

  1. An Empirical Relation between Sodium Absorption and Dust Extinction

    OpenAIRE

    Poznanski, Dovi; Prochaska, J. Xavier; Bloom, Joshua S.

    2012-01-01

    Dust extinction and reddening are ubiquitous in astronomical observations and are often a major source of systematic uncertainty. We present here a study of the correlation between extinction in the Milky Way and the equivalent width of the NaI D absorption doublet. Our sample includes more than 100 high resolution spectra from the KECK telescopes and nearly a million low resolution spectra from the Sloan Digital Sky Survey (SDSS). We measure the correlation to unprecedented precision, constr...

  2. Dust extinction and absorption: the challenge of porous grains

    OpenAIRE

    Voshchinnikov, N. V.; Il'in, V. B.; Henning, Th.; Dubkova, D. N.

    2005-01-01

    In many models of dusty objects in space the grains are assumed to be composite or fluffy. However, the computation of the optical properties of such particles is still a very difficult problem. We analyze how the increase of grain porosity influences basic features of cosmic dust -- interstellar extinction, dust temperature, infrared bands and millimeter opacity. Porous grains can reproduce the flat extinction across the $3 - 8 \\mkm$ wavelength range measured for several lines of sight by {\\...

  3. Global Amphibian Extinction Risk Assessment for the Panzootic Chytrid Fungus

    OpenAIRE

    Fisher, Matthew C.; Michael Veith; Susan Walker; Garner, Trenton W. J.; Jaime Bosch; Sebastian Schmidtlein; Jon Bielby; Jos Kielgast; Dennis Rödder; Stefan Lötters

    2009-01-01

    Species are being lost at increasing rates due to anthropogenic effects, leading to the recognition that we are witnessing the onset of a sixth mass extinction. Emerging infectious disease has been shown to increase species loss and any attempts to reduce extinction rates need to squarely confront this challenge. Here, we develop a procedure for identifying amphibian species that are most at risk from the effects of chytridiomycosis by combining spatial analyses of key host life-history varia...

  4. Flightless birds: When did the dodo become extinct?

    Science.gov (United States)

    Roberts, David L.; Solow, Andrew R.

    2003-11-01

    The extinction of the dodo (Raphus cucullatus L.; Fig. 1) is commonly dated to the last confirmed sighting in 1662, reported by Volkert Evertsz on an islet off Mauritius. By this time, the dodo had become extremely rare - the previous sighting having been 24 years earlier - but the species probably persisted unseen beyond this date. Here we use a statistical method to establish the actual extinction time of the dodo as 1690, almost 30 years after its most recent sighting.

  5. Mechanisms of renewal after the extinction of discriminated operant behavior.

    Science.gov (United States)

    Todd, Travis P; Vurbic, Drina; Bouton, Mark E

    2014-07-01

    Three experiments demonstrated, and examined the mechanisms that underlie, the renewal of extinguished discriminated operant behavior. In Experiment 1, rats were trained to perform 1 response (lever press or chain pull) in the presence of one discriminative stimulus (S; light or tone) in Context A, and to perform the other response in the presence of the other S in Context B. Next, each of the original S/response combinations was extinguished in the alternate context. When the S/response combinations were tested back in the context in which they had been trained, responding in the presence of S returned (an ABA renewal effect was observed). This renewal could not be due to differential context-reinforcer associations, suggesting instead that the extinction context inhibits either the response and/or the effectiveness of the S. Consistent with the latter mechanism, in Experiment 2, ABA renewal was still observed when both the extinction and renewal contexts inhibited the same response. However, in Experiment 3, previous extinction of the response in the renewing context (occasioned by a different S) reduced AAB renewal more than did extinction of the different response. Taken together, the results suggest at least 2 mechanisms of renewal after instrumental extinction. First, extinction performance is at least partly controlled by a direct inhibitory association that is formed between the context and the response. Second, in the discriminated operant procedure, extinction performance can sometimes be partly controlled by a reduction in the effectiveness of the S in the extinction context. Renewal of discriminated operant behavior can be produced by a release from either of these forms of inhibition.

  6. Jet Extinction from Non-Perturbative Quantum Gravity Effects

    OpenAIRE

    Kilic, Can; Lath, Amitabh; Rose, Keith; Thomas, Scott

    2012-01-01

    The infrared-ultraviolet properties of quantum gravity suggest on very general grounds that hard short distance scattering processes are highly suppressed for center of mass scattering energies beyond the fundamental Planck scale. If this scale is not too far above the electroweak scale, these non-perturbative quantum gravity effects could be manifest as an extinction of high transverse momentum jets at the LHC. To model these effects we implement an Extinction Monte Carlo modification of the...

  7. Extinction and Positivity for a Doubly Nonlinear Degenerate Parabolic Equation

    Institute of Scientific and Technical Information of China (English)

    Hong Jun YUAN; Song Zhe LIAN; Chun Ling CAO; Wen Jie GAO; Xiao Jing XU

    2007-01-01

    The aims of this paper are to discuss the extinction and positivity for the solution of the initial boundary value problem and Cauchy problem of ut = div(|▽um]p-2▽um). It is proved that the weak solution will be extinct for 1<p≤+1/m and will be positive for p>1+1/m for large t, where m>0.

  8. Dispersal, niche breadth and population extinction: colonization ratios predict range size in North American dragonflies.

    Science.gov (United States)

    McCauley, Shannon J; Davis, Christopher J; Werner, Earl E; Robeson, Michael S

    2014-07-01

    Species' range sizes are shaped by fundamental differences in species' ecological and evolutionary characteristics, and understanding the mechanisms determining range size can shed light on the factors responsible for generating and structuring biological diversity. Moreover, because geographic range size is associated with a species' risk of extinction and their ability to respond to global changes in climate and land use, understanding these mechanisms has important conservation implications. Despite the hypotheses that dispersal behaviour is a strong determinant of species range areas, few data are available to directly compare the relationship between dispersal behaviour and range size. Here, we overcome this limitation by combining data from a multispecies dispersal experiment with additional species-level trait data that are commonly hypothesized to affect range size (e.g. niche breadth, local abundance and body size.). This enables us to examine the relationship between these species-level traits and range size across North America for fifteen dragonfly species. Ten models based on a priori predictions about the relationship between species traits and range size were evaluated and two models were identified as good predictors of species range size. These models indicated that only two species' level traits, dispersal behaviour and niche breadth were strongly related to range size. The evidence from these two models indicated that dragonfly species that disperse more often and further had larger North American ranges. Extinction and colonization dynamics are expected to be a key linkage between dispersal behaviour and range size in dragonflies. To evaluate how extinction and colonization dynamics among dragonflies were related to range size we used an independent data set of extinction and colonization rates for eleven dragonfly species and assessed the relationship between these populations rates and North American range areas for these species. We found a

  9. Effects of roost specialization on extinction risk in bats.

    Science.gov (United States)

    Sagot, Maria; Chaverri, Gloriana

    2015-12-01

    Understanding causes and consequences of ecological specialization is of major concern in conservation. Specialist species are particularly vulnerable to human activities. If their food or habitats are depleted or lost, they may not be able to exploit alternative resources, and population losses may result. We examined International Union for Conservation of Nature (IUCN) Red List bat data and the number of roosts used per species (accounting for phylogenetic independence) to determine whether roost specialization is correlated with extinction risk. We found a significant correlation between the IUCN Red List category and the number of roost types used. Species that use fewer roost types had a higher risk of extinction. We found that caves and similar structures were the most widely used roost types, particularly by species under some level of risk of extinction. Many critically endangered, endangered, or vulnerable species used natural roosts exclusively, whereas less threatened species used natural and human-made roosts. Our results suggest that roost loss, particularly in species that rely on a single roost type, may be linked to extinction risk. Our focus on a single life history trait prevented us from determining how important this variable is for extinction risk relative to other variables, but we have taken a first step toward prioritizing conservation actions. Our results also suggest that roost specialization may exacerbate population declines due to other risk factors, such as hunting pressure or habitat loss, and thus that management actions to preserve species under risk of extinction should prioritize protection of roosting sites.

  10. European quaternary refugia: a factor in large carnivore extinction?

    Science.gov (United States)

    O'Regan, Hannah J.; Turner, Alan; Wilkinson, David M.

    2002-12-01

    The extinction of large carnivores in Europe during the Quaternary is reviewed and the potential role of glacial refugia in these extinctions is investigated using the VORTEX model for population viability analysis. A model was built for a medium sized big cat similar to the extinct Panthera gombaszoegensis utilising life history data from the modern jaguar Panthera onca. This approach highlighted the potential importance of glacial refugia in the extinction process. Even model refugia the size of the Italian peninsula did not guarantee persistence of a population over a 1000 yr time span, illustrating the role of chance in survival in such a refugium. An area the size of the largest Mediterranean island was unable to support a big cat population for a period of 1000 yr. The models also demonstrated the importance of inbreeding as a mechanism for extinction in refugia. It is suggested that repeated genetic bottlenecks during successive glaciations would tend to remove lethal recessive alleles from the population, increasing the probability of survival in refugia in subsequent glaciations. The history of extinction of large carnivores in the European Quaternary is interpreted in the light of these results.

  11. Resistance to extinction, generalization decrement, and conditioned reinforcement.

    Science.gov (United States)

    Dulaney, Alana E; Bell, Matthew C

    2008-06-01

    This study investigated generalization decrement during an extinction resistance-to-change test for pigeon key pecking using a two-component multiple schedule with equal variable-interval 3-min schedules and different reinforcer amounts (one component presented 2-s access to reinforcement and the other 8s). After establishing baseline responding, subjects were assigned to one of the two extinction conditions: hopper stimuli (hopper and hopper light were activated but no food was available) or Control (inactive hopper and hopper light). Responding in the 8-s component was more resistant to extinction than responding in the 2-s component, the hopper stimuli group was more resistant to extinction compared to the Control group, and an interaction between amount of reinforcement, extinction condition, and session block was present. This finding supports generalization decrement as a factor that influences resistance to extinction. Hopper-time data (the amount of time subjects spent with their heads in the hopper) were compared to resistance-to-change data in an investigation of the role of conditioned reinforcement on resistance to change.

  12. Real fuel effects on flame extinction and re-ignition

    Science.gov (United States)

    Zhao, Xinyu; Wu, Bifen; Xu, Chao; Lu, Tianfeng; Chen, Jacqueline H.

    2016-11-01

    Flame-vortex interactions have significant implications in studying combustion in practical aeronautical engines, and can be used to facilitate the model development in capturing local extinction and re-ignition. To study the interactions between the complex fuel and the intense turbulence that are commonly encountered in engines, direct numerical simulations of the interactions between a flame and a vortex pair are carried out using a recently-developed 24-species reduced chemistry for n-dodecane. Both non-premixed and premixed flames with different initial and inlet thermochemical conditions are studied. Parametric studies of different vortex strengths and orientations are carried out to induce maximum local extinction and re-ignition. Chemical-explosive-mode-analysis based flame diagnostic tools are used to identify different modes of combustion, including auto-ignition and extinction. Results obtained from the reduced chemistry are compared with those obtained from one-step chemistry to quantify the effect of fuel pyrolysis on the extinction limit. Effects of flame curvature, heat loss and unsteadiness on flame extinction are also explored. Finally, the validity of current turbulent combustion models to capture the local extinction and re-ignition will be discussed.

  13. Hubble Tarantula Treasury Project. IV. The extinction law

    CERN Document Server

    De Marchi, Guido; Sabbi, Elena; Lennon, Daniel; Anderson, Jay; van der Marel, Roeland; Cignoni, Michele; Grebel, Eva K; Larsen, Soeren; Zaritsky, Dennis; Zeidler, Peter; Gouliermis, Dimitrios; Aloisi, Alessandra

    2015-01-01

    We report on the study of interstellar extinction across the Tarantula nebula (30 Doradus), in the Large Magellanic Cloud, using observations from the Hubble Tarantula Treasury Project in the 0.3 - 1.6 micron range. The considerable and patchy extinction inside the nebula causes about 3500 red clump stars to be scattered along the reddening vector in the colour-magnitude diagrams, thereby allowing an accurate determination of the reddening slope in all bands. The measured slope of the reddening vector is remarkably steeper in all bands than in the the Galactic diffuse interstellar medium. At optical wavelengths, the larger ratio of total-to-selective extinction, namely Rv = 4.5 +/- 0.2, implies the presence of a grey component in the extinction law, due to a larger fraction of large grains. The extra large grains are most likely ices from supernova ejecta and will significantly alter the extinction properties of the region until they sublimate in 50 - 100 Myr. We discuss the implications of this extinction la...

  14. Hubble Tarantula Treasury Project - IV. The extinction law

    Science.gov (United States)

    De Marchi, Guido; Panagia, Nino; Sabbi, Elena; Lennon, Daniel; Anderson, Jay; van der Marel, Roeland; Cignoni, Michele; Grebel, Eva K.; Larsen, Søren; Zaritsky, Dennis; Zeidler, Peter; Gouliermis, Dimitrios; Aloisi, Alessandra

    2016-02-01

    We report on the study of interstellar extinction across the Tarantula Nebula (30 Doradus), in the Large Magellanic Cloud, using observations from the Hubble Tarantula Treasury Project in the 0.3-1.6 μm range. The considerable and patchy extinction inside the nebula causes about 3500 red clump stars to be scattered along the reddening vector in the colour-magnitude diagrams, thereby allowing an accurate determination of the reddening slope in all bands. The measured slope of the reddening vector is remarkably steeper in all bands than in the the Galactic diffuse interstellar medium. At optical wavelengths, the larger ratio of total-to-selective extinction, namely RV = 4.5 ± 0.2, implies the presence of a grey component in the extinction law, due to a larger fraction of large grains. The extra large grains are most likely ices from supernova ejecta and will significantly alter the extinction properties of the region until they sublimate in 50-100 Myr. We discuss the implications of this extinction law for the Tarantula Nebula and in general for regions of massive star formation in galaxies. Our results suggest that fluxes of strongly star-forming regions are likely to be underestimated by a factor of about 2 in the optical.

  15. The effect of morphine on fear extinction in rats.

    Science.gov (United States)

    Morris, M D; Gebhart, G F

    1978-05-31

    Rats were trained on an appetitive discretetrial discriminated-punishment task in which they learned to suppress responding when an intense flashing light predicting punishment was present and to respond rapidly on trials when the flashing light was absent. Once animals were performing discriminatively, 0.75, 3.0, or 6.0 mg/kg of morphine (base) was administered and a fear extinction session consisting of 60 nonshocked presentations of the flashing light was given. Two saline control groups, one that received fear extinction and one that did not, were also included in the experiment. On the day following fear extinction, all rats were tested in the undrugged state on the discriminated punishment problem, but without shock. The rats receiving 3.0 and 6.0 mg/kg of morphine before the fear extinction session were suppressed by the flashing light more than the saline extinction group or the 0.75 mg/kg morphine treatment group. Moreover, the two higher dose morphine groups were suppressed as readily as the saline group that received no fear extinction. These results are attributed to the antiemotionality effects of morphine.

  16. Can oncology recapitulate paleontology? Lessons from species extinctions.

    Science.gov (United States)

    Walther, Viola; Hiley, Crispin T; Shibata, Darryl; Swanton, Charles; Turner, Paul E; Maley, Carlo C

    2015-05-01

    Although we can treat cancers with cytotoxic chemotherapies, target them with molecules that inhibit oncogenic drivers, and induce substantial cell death with radiation, local and metastatic tumours recur, resulting in extensive morbidity and mortality. Indeed, driving a tumour to extinction is difficult. Geographically dispersed species of organisms are perhaps equally resistant to extinction, but >99.9% of species that have ever existed on this planet have become extinct. By contrast, we are nowhere near that level of success in cancer therapy. The phenomena are broadly analogous--in both cases, a genetically diverse population mutates and evolves through natural selection. The goal of cancer therapy is to cause cancer cell population extinction, or at least to limit any further increase in population size, to prevent the tumour burden from overwhelming the patient. However, despite available treatments, complete responses are rare, and partial responses are limited in duration. Many patients eventually relapse with tumours that evolve from cells that survive therapy. Similarly, species are remarkably resilient to environmental change. Paleontology can show us the conditions that lead to extinction and the characteristics of species that make them resistant to extinction. These lessons could be translated to improve cancer therapy and prognosis.

  17. Resurrection of DNA function in vivo from an extinct genome.

    Directory of Open Access Journals (Sweden)

    Andrew J Pask

    Full Text Available There is a burgeoning repository of information available from ancient DNA that can be used to understand how genomes have evolved and to determine the genetic features that defined a particular species. To assess the functional consequences of changes to a genome, a variety of methods are needed to examine extinct DNA function. We isolated a transcriptional enhancer element from the genome of an extinct marsupial, the Tasmanian tiger (Thylacinus cynocephalus or thylacine, obtained from 100 year-old ethanol-fixed tissues from museum collections. We then examined the function of the enhancer in vivo. Using a transgenic approach, it was possible to resurrect DNA function in transgenic mice. The results demonstrate that the thylacine Col2A1 enhancer directed chondrocyte-specific expression in this extinct mammalian species in the same way as its orthologue does in mice. While other studies have examined extinct coding DNA function in vitro, this is the first example of the restoration of extinct non-coding DNA and examination of its function in vivo. Our method using transgenesis can be used to explore the function of regulatory and protein-coding sequences obtained from any extinct species in an in vivo model system, providing important insights into gene evolution and diversity.

  18. Method of stimulus combination impacts resistance to extinction.

    Science.gov (United States)

    Podlesnik, Christopher A; Bai, John Y H

    2015-07-01

    Reinforcing an alternative response in the presence of the stimuli governing a target response increases resistance to extinction of target responding, relative to training target responding on its own. Conversely, training alternative and target responses in the presence of different stimuli and combining those stimuli only decreases resistance to extinction of target responding, relative to target responding on its own. The present study assessed how different methods of combining discriminative stimuli influence resistance to extinction of responding in pigeons. As in previous studies, combining stimuli across different keys only decreased resistance to extinction of target responding relative to target responding on its own. In comparison, combining stimuli on the same key initially increased resistance to extinction of target responding, but repeated tests resulted in similar levels of responding as target responding with stimuli combined on separate keys. Moreover, greater overall reinforcement rates produced greater resistance to extinction with both methods of combining stimuli, consistent with behavioral momentum theory. These findings reveal several behavioral processes influence the outcome of combining stimuli--including perceptual processes, discriminative control by contingencies, response competition, and behavioral momentum.

  19. Comparing the context specificity of extinction and latent inhibition.

    Science.gov (United States)

    Miller, Ralph R; Laborda, Mario A; Polack, Cody W; Miguez, Gonzalo

    2015-12-01

    Exposure to a cue alone either before (i.e., latent inhibition treatment) or after (i.e., extinction) the cue is paired with an unconditioned stimulus results in attenuated conditioned responding to the cue. Here we report two experiments in which potential parallels between the context specificity of the effects of extinction and latent inhibition treatments were directly compared in a lick suppression preparation with rats. The reversed ordering of conditioning and nonreinforcement in extinction and latent inhibition designs allowed us to examine the effect of training order on the context specificity of what is learned given phasic reinforcement and nonreinforcement of a target cue. Experiment 1 revealed that when conditioned-stimulus (CS) conditioning and CS nonreinforcement were administered in the same context, both extinction and latent inhibition treatments had reduced impacts on test performance, relative to excitatory conditioning when testing occurred outside the treatment context. Similarly, Experiment 2 showed that when conditioning was administered in one context and nonreinforcement was administered in a second context, the effects of both extinction and latent inhibition treatments were attenuated when testing occurred in a neutral context, relative to the context in which the CS was nonreinforced. The observed context specificity of extinction and latent inhibition treatments has been previously reported in both cases, but not in a single experiment under otherwise identical conditions. The results of the two experiments convergently suggest that memory of nonreinforcement becomes context dependent after a cue is both reinforced and nonreinforced, independent of the order of training.

  20. The Effect of D-Cycloserine on Immediate vs. Delayed Extinction of Learned Fear

    Science.gov (United States)

    Langton, Julia M.; Richardson, Rick

    2010-01-01

    We compared the effect of D-cycloserine (DCS) on immediate (10 min after conditioning) and delayed (24 h after conditioning) extinction of learned fear in rats. DCS facilitated both immediate and delayed extinction when the drug was administered after extinction training. However, DCS did not facilitate immediate extinction when administered prior…

  1. Effects of Recent Exposure to a Conditioned Stimulus on Extinction of Pavlovian Fear Conditioning

    Science.gov (United States)

    Chan, Wan Yee Macy; Leung, Hiu T.; Westbrook, R. Frederick; McNally, Gavan P.

    2010-01-01

    In six experiments we studied the effects of a single re-exposure to a conditioned stimulus (CS; "retrieval trial") prior to extinction training (extinction-reconsolidation boundary) on the development of and recovery from fear extinction. A single retrieval trial prior to extinction training significantly augmented the renewal and reinstatement…

  2. Medial Prefrontal Cortex Activation Facilitates Re-Extinction of Fear in Rats

    Science.gov (United States)

    Chang, Chun-hui; Maren, Stephen

    2011-01-01

    It has been suggested that reduced infralimbic (IL) cortical activity contributes to impairments of fear extinction. We therefore explored whether pharmacological activation of the IL would facilitate extinction under conditions it normally fails (i.e., immediate extinction). Rats received auditory fear conditioning 1 h before extinction training.…

  3. The Evolution and Extinction of the Dinosaurs

    Science.gov (United States)

    Fastovsky, David E.; Weishampel, David B.

    2005-02-01

    Written for non-specialists, this detailed survey of dinosaur origins, diversity, and extinction is designed as a series of successive essays covering important and timely topics in dinosaur paleobiology, such as "warm-bloodedness," birds as living dinosaurs, the new, non-flying feathered dinosaurs, dinosaur functional morphology, and cladistic methods in systematics. Its explicitly phylogenetic approach to the group is that taken by dinosaur specialists. The book is not an edited compilation of the works of many individuals, but a unique, cohesive perspective on Dinosauria. Lavishly illustrated with hundreds of new, specially commissioned illustrations by John Sibbick, world-famous illustrator of dinosaurs, the volume includes multi-page drawings as well as sketches and diagrams. First edition Hb (1996): 0-521-44496-9 David E. Fastovsky is Professor of Geosciences at the University of Rhode Island. Fastovsky, the author of numerous scientific publications dealing with Mesozoic vertebrate faunas and their ancient environments, is also scientific co-Editor of Geology. He has undertaken extensive fieldwork studying dinosaurs and their environments in Montana, North Dakota, Arizona, Mexico, and Mongolia. David B. Weishampel is a professor at the Center for Functional Anatomy and Evolution at Johns Hopkins University, School of Medicine. Weishampel is best known for discovering, researching, and naming several rare European dinosaur species. During the 1980s Weishampel gained fame for his work with American paleontologist Jack Horner and later named the famous plant-eating, egg-laying Orodromeus, Horner. Now, a decade after his pioneering studies with Horner, Weishampel is most widely known for his current work on the Romanian dinosaur fauna. He is the author and co-author of many titles, including The Dinosaur Papers, 1676-1906 (Norton, 2003); The Dinosauria, (University of California, 1990); and Dinosaurs of the East Coast, (Johns Hopkins University Press, 1996).

  4. The effects of instructions on the sensitivity of negatively reinforced human behavior to extinction.

    Science.gov (United States)

    Alessandri, Jérôme; Cançado, Carlos R X

    2017-03-01

    The effects of instructions on the sensitivity of negatively reinforced (escape) behavior to extinction were studied. Initially, responding produced timeouts from pressing a force cell on a variable-ratio (VR) schedule, which was then discontinued (extinction). Based on extinction data, participants were distributed into two groups. Participants in the Extinction Group (for which response rates were low in extinction) were instructed that the experimenter expected them to continue responding in extinction after a second exposure to the VR schedule. Participants in the Persistence group (for which response rates were high in extinction) were instructed that the experimenter expected them to stop responding in extinction. Relative to the condition in which instructions were absent, extinction-response rates increased and decreased, respectively, for participants in the Persistence and Extinction groups. These results replicate and extend to negatively reinforced responding previous findings that showed behavioral control by instructions formulated as explicit experimenter demands or expectations.

  5. Accelerated modern human–induced species losses: Entering the sixth mass extinction

    OpenAIRE

    Ceballos, Gerardo; Ehrlich, Paul R.; Barnosky, Anthony D; García, Andrés; Pringle, Robert M.; Todd M. Palmer

    2015-01-01

    The oft-repeated claim that Earth’s biota is entering a sixth “mass extinction” depends on clearly demonstrating that current extinction rates are far above the “background” rates prevailing between the five previous mass extinctions. Earlier estimates of extinction rates have been criticized for using assumptions that might overestimate the severity of the extinction crisis. We assess, using extremely conservative assumptions, whether human activities are causing a mass extinction. First, we...

  6. Revisiting the role of infralimbic cortex in fear extinction with optogenetics.

    Science.gov (United States)

    Do-Monte, Fabricio H; Manzano-Nieves, Gabriela; Quiñones-Laracuente, Kelvin; Ramos-Medina, Liorimar; Quirk, Gregory J

    2015-02-25

    Previous rodent studies have implicated the infralimbic (IL) subregion of the medial prefrontal cortex in extinction of auditory fear conditioning. However, these studies used pharmacological inactivation or electrical stimulation techniques, which lack temporal precision and neuronal specificity. Here, we used an optogenetic approach to either activate (with channelrhodopsin) or silence (with halorhodopsin) glutamatergic IL neurons during conditioned tones delivered in one of two phases: extinction training or extinction retrieval. Activating IL neurons during extinction training reduced fear expression and strengthened extinction memory the following day. Silencing IL neurons during extinction training had no effect on within-session extinction, but impaired the retrieval of extinction the following day, indicating that IL activity during extinction tones is necessary for the formation of extinction memory. Surprisingly, however, silencing IL neurons optogenetically or pharmacologically during the retrieval of extinction 1 day or 1 week following extinction training had no effect. Our findings suggest that IL activity during extinction training likely facilitates storage of extinction in target structures, but contrary to current models, IL activity does not appear to be necessary for retrieval of extinction memory.

  7. Dust evolution processes constrained by extinction curves in nearby galaxies

    Science.gov (United States)

    Hou, Kuan-Chou; Hirashita, Hiroyuki; Michałowski, Michał J.

    2016-09-01

    Extinction curves, especially those in the Milky Way (MW), the Large Magellanic Cloud (LMC), and the Small Magellanic Cloud (SMC), have provided us with a clue to the dust properties in the nearby Universe. We examine whether or not these extinction curves can be explained by well-known dust evolution processes. We treat the dust production in stellar ejecta, destruction in supernova shocks, dust growth by accretion and coagulation, and dust disruption by shattering. To make a survey of the large parameter space possible, we simplify the treatment of the grain size distribution evolution by adopting the "two-size approximation," in which we divide the grain population into small (≲0.03 μm) and large (≳0.03 μm) grains. It is confirmed that the MW extinction curve can be reproduced in reasonable ranges for the time-scale of the above processes with a silicate-graphite mixture. This indicates that the MW extinction curve is a natural consequence of the dust evolution through the above processes. We also find that the same models fail to reproduce the SMC/LMC extinction curves. Nevertheless, this failure can be remedied by giving higher supernova destruction rates for small dust particles dust and considering amorphous carbon for carbonaceous dust; these modifications in fact fall in line with previous studies. Therefore, we conclude that the current dust evolution scenario composed of the aforementioned processes is successful in explaining the extinction curves. All the extinction curves favor efficient interstellar processing of dust, especially strong grain growth by accretion and coagulation.

  8. Two hundred years of local avian extinctions in eastern Amazonia.

    Science.gov (United States)

    Moura, Nárgila G; Lees, Alexander C; Aleixo, Alexandre; Barlow, Jos; Dantas, Sidnei M; Ferreira, Joice; Lima, Maria de Fátima C; Gardner, Toby A

    2014-10-01

    Local, regional, and global extinctions caused by habitat loss, degradation, and fragmentation have been widely reported for the tropics. The patterns and drivers of this loss of species are now increasingly well known in Amazonia, but there remains a significant gap in understanding of long-term trends in species persistence and extinction in anthropogenic landscapes. Such a historical perspective is critical for understanding the status and trends of extant biodiversity as well as for identifying priorities to halt further losses. Using extensive historical data sets of specimen records and results of contemporary surveys, we searched for evidence of local extinctions of a terra firma rainforest avifauna over 200 years in a 2500 km(2) eastern Amazonian region around the Brazilian city of Belém. This region has the longest history of ornithological fieldwork in the entire Amazon basin and lies in the highly threatened Belém Centre of Endemism. We also compared our historically inferred extinction events with extensive data on species occurrences in a sample of catchments in a nearby municipality (Paragominas) that encompass a gradient of past forest loss. We found evidence for the possible extinction of 47 species (14% of the regional species pool) that were unreported from 1980 to 2013 (80% last recorded between 1900 and 1980). Seventeen species appear on the International Union for Conservation of Nature Red List, and many of these are large-bodied. The species lost from the region immediately around Belém are similar to those which are currently restricted to well-forested catchments in Paragominas. Although we anticipate the future rediscovery or recolonization of some species inferred to be extinct by our calculations, we also expect that there are likely to be additional local extinctions, not reported here, given the ongoing loss and degradation of remaining areas of native vegetation across eastern Amazonia.

  9. High-precision U-Pb zircon geochronological constraints on the End-Triassic Mass Extinction, the late Triassic Astronomical Time Scale and geochemical evolution of CAMP magmatism

    Science.gov (United States)

    Blackburn, T. J.; Olsen, P. E.; Bowring, S. A.; McLean, N. M.; Kent, D. V.; Puffer, J. H.; McHone, G.; Rasbury, T.

    2012-12-01

    Mass extinction events that punctuate Earth's history have had a large influence on the evolution, diversity and composition of our planet's biosphere. The approximate temporal coincidence between the five major extinction events over the last 542 million years and the eruption of Large Igneous Provinces (LIPs) has led to the speculation that climate and environmental perturbations generated by the emplacement of a large volume of magma in a short period of time triggered each global biologic crisis. Establishing a causal link between extinction and the onset and tempo of LIP eruption has proved difficult because of the geographic separation between LIP volcanic deposits and stratigraphic sequences preserving evidence of the extinction. In most cases, the uncertainties on available radioisotopic dates used to correlate between geographically separated study areas often exceed the duration of both the extinction interval and LIP volcanism by an order of magnitude. The "end-Triassic extinction" (ETE) is one of the "big five" and is characterized by the disappearance of several terrestrial and marine species and dominance of Dinosaurs for the next 134 million years. Speculation on the cause has centered on massive climate perturbations thought to accompany the eruption of flood basalts related to the Central Atlantic Magmatic Province (CAMP), the most aerially extensive and volumetrically one of the largest LIPs on Earth. Despite an approximate temporal coincidence between extinction and volcanism, there lacks evidence placing the eruption of CAMP prior to or at the initiation of the extinction. Estimates of the timing and/or duration of CAMP volcanism provided by astrochronology and Ar-Ar geochronology differ by an order of magnitude, precluding high-precision tests of the relationship between LIP volcanism and the mass extinction, the causes of which are dependent upon the rate of magma eruption. Here we present high precision zircon U-Pb ID-TIMS geochronologic data

  10. The three-quarter power scaling of extinction risk in Late Pleistocene mammals, and a new theory of the size selectivity of extinction

    NARCIS (Netherlands)

    Polishchuk, L.

    2010-01-01

    Questions: What is the pattern of body mass versus extinction risk in the Late Pleistocene extinctions of mammals, both qualitatively and quantitatively? Are there patterns that relate extinction risk to the well-known allometries of body mass with population density or population growth rate? Theor

  11. Biological computation

    CERN Document Server

    Lamm, Ehud

    2011-01-01

    Introduction and Biological BackgroundBiological ComputationThe Influence of Biology on Mathematics-Historical ExamplesBiological IntroductionModels and Simulations Cellular Automata Biological BackgroundThe Game of Life General Definition of Cellular Automata One-Dimensional AutomataExamples of Cellular AutomataComparison with a Continuous Mathematical Model Computational UniversalitySelf-Replication Pseudo Code Evolutionary ComputationEvolutionary Biology and Evolutionary ComputationGenetic AlgorithmsExample ApplicationsAnalysis of the Behavior of Genetic AlgorithmsLamarckian Evolution Genet

  12. Determination of aerosol extinction coefficient and mass extinction efficiency by DOAS with a flashlight source

    Institute of Scientific and Technical Information of China (English)

    Si Fu-Qi; Liu Jian-Guo; Xie Pin-Hua; Zhang Yu-Jun; Liu Wen-Qing; Hiroaki Kuze; Liu Cheng; Nofel Lagrosas; Nobuo Takeuchi

    2005-01-01

    With the method of differential optical absorption spectroscopy (DOAS), average concentrations of aerosol particles along light path were measured with a flashlight source in Chiba area during the period of one month. The optical thickness at 550 nm is compared with the concentration of ground-measured suspended particulate matter (SPM). Good correlations are found between the DOAS and SPM data, leading to the determination of the aerosol mass extinction efficiency (MEE) to be possible in the lower troposphere. The average MEE value is about 7.6m2.g-1, and the parameter exhibits a good correlation with the particle size as determined from the wavelength dependence of the DOAS signal intensity.

  13. Impact Crises, Mass Extinctions, and Galactic Dynamics: A Unified Theory

    Science.gov (United States)

    Rampino, M.R.

    1997-01-01

    A general hypothesis linking mass extinctions of life with impacts of large asteroids and comets is based on astronomical data, impact dynamics, and geological information. The waiting times of large-body impacts on the Earth, derived from the flux of Earth-crossing asteroids and comets, and the estimated size of impacts capable of causing large-scale environmental disasters predict that impacts of objects (sup 3)5 km in diameter ((sup 3)10(exp 7) Mt TNT equivalent) could be sufficient to explain the record of about 25 extinction pulses in the last 540 m.y., with the five recorded major mass extinctions related to the impacts of the largest objects of (sup 3)10 km in diameter ( (sup 3)10(exp 8) Mt events). Smaller impacts (about 10(exp 6)-10(exp 7) Mt), with significant regional and even global environmental effects, could be responsible for the lesser boundaries in the geologic record. Tests of the "kill curve" relationship for impact-induced extinctions based on new data on extinction intensities and several well-dated large impact craters suggest that major mass extinctions require large impacts, and that a step in the kill curve may exist at impacts that produce craters of -100 km diameter, with smaller impacts capable of only relatively weak extinction pulses. Single impact craters < about 60 km in diameter should not be associated with global extinction pulses detectable in the Sepkoski database (although they may explain stage and zone boundaries marked by lesser faunal turnover), but multiple impacts in that size range may produce significant stepped extinction pulses. Statistical tests of the last occurrences of species at mass-extinction boundaries are generally consistent with predictions for abrupt or stepped extinctions, and several boundaries are known to show "catastrophic" signatures of environmental disasters and biomass crash, impoverished postextinction fauna and flora dominated by stress-tolerant and opportunistic species, and gradual ecological

  14. Using the Theme of Mass Extinctions to Teach Science to Non-Science Major College and University Students

    Science.gov (United States)

    Boness, D. A.

    2013-12-01

    The general public is heavily exposed to "news" and commentary---and arts and entertainment---that either inadvertently misrepresents science or even acts to undermine it. Climate change denial and evolution denial is well funded and pervasive. Even university-educated people get little exposure to the aims, methods, debates, and results of scientific inquiry because unless they earn degrees in science they typically only take one or two introductory science courses at the university level. This presentation reports the development of a new, non-science major Seattle University course on mass extinctions throughout earth history. Seattle University is an urban, Jesuit Catholic university. The topic of mass extinctions was chosen for several reasons: (1) To expose the students to a part of current science that has rich historical roots yet by necessity uses methods and reasoning from geology, geophysics, oceanography, physics, chemistry, biology, and astronomy. This multidisciplinary course provides some coverage of sciences that the student would not typically ever see beyond secondary school. (2) To enable the students to learn enough to follow some of the recent and current debates within science (e.g., mass extinctions by asteroid impact versus massive volcanism, ocean anoxia, and ocean acidification), with the students reading some of the actual literature, such as articles in Science, Nature, or Nature Geoscience. (3) To emphasize the importance of "deep time" as evolutionary biological processes interact with massive environmental change over time scales from hundreds of millions of years down to the seconds and hours of an asteroid or comet strike. (4) To show the effects of climate change in the past, present, and future, due to both natural and anthropogenic causes. (5) To help the student critically evaluate the extent to which their future involves a human-caused mass extinction.

  15. Theoretical approximations and experimental extinction coefficients of biopharmaceuticals.

    Science.gov (United States)

    Miranda-Hernández, Mariana P; Valle-González, Elba R; Ferreira-Gómez, David; Pérez, Néstor O; Flores-Ortiz, Luis F; Medina-Rivero, Emilio

    2016-02-01

    UV spectrophotometric measurement is a widely accepted and standardized routine analysis for quantitation of highly purified proteins; however, the reliability of the results strictly depends on the accuracy of the employed extinction coefficients. In this work, an experimental estimation of the differential refractive index (dn/dc), based on dry weight measurements, was performed in order to determine accurate extinction coefficients for four biotherapeutic proteins and one synthetic copolymer after separation in a size-exclusion ultra-performance liquid chromatograph coupled to an ultraviolet, multiangle light scattering and refractive index (SE-UPLC-UV-MALS-RI) multidetection system. The results showed small deviations with respect to theoretical values, calculated from the specific amino acid sequences, for all the studied immunoglobulins. Nevertheless, for proteins like etanercept and glatiramer acetate, several considerations, such as glycan content, partial specific volume, polarizability, and higher order structure, should be considered to properly calculate theoretical extinction coefficient values. Herein, these values were assessed with simple approximations. The precision of the experimentally obtained extinction coefficients, and its convergence towards the theoretical values, makes them useful for characterization and comparability exercises. Also, these values provide insight into the absorbance and scattering properties of the evaluated proteins. Overall, this methodology is capable of providing accurate extinction coefficients useful for development studies.

  16. Starburst-like Dust Extinction in the Small Magellanic Cloud

    CERN Document Server

    Gordon, K D

    1998-01-01

    The recent discovery that the UV dust extinction in starburst galaxies is similar to that found in the Small Magellanic Cloud (SMC) motivated us to re-investigate the ultraviolet (UV) extinction found in the SMC. We have been able to improve significantly on previous studies by carefully choosing pairs of well matched reddened and unreddened stars. In addition, we benefited from the improved S/N of the NEWSIPS IUE data and the larger sample of SMC stars now available. Searching the IUE Final Archive, we found only four suitable early-type stars that were significantly reddened and had well matched comparison stars. The extinction for three of these stars is remarkably similar. The curves are roughly linear with 1/lambda and have no measurable 2175 A bump. The fourth star has an extinction curve with a significant 2175 A bump and weaker far-UV extinction. The dust along all four sightlines is thought to be local to the SMC. There is no significant Galactic foreground component. The first three stars lie in the...

  17. Effects of endocannabinoid and endovanilloid systems on aversive memory extinction.

    Science.gov (United States)

    Laricchiuta, Daniela; Centonze, Diego; Petrosini, Laura

    2013-11-01

    In contextual fear conditioning animals have to integrate various elemental stimuli into a coherent representation of the condition and then associate context representation with punishment. Although several studies indicated the modulating role of endocannabinoid system (ECS) on the associative learning, ECS effect on contextual fear conditioning requires further investigations. The present study assessed the effects of the increased endocannabinoid anandamide (AEA) tone on acquisition, retrieval and extinction of the contextual fear conditioning. Given that AEA may bind to cannabinoid type 1 (CB1) receptors as well as to postsynaptic ionotropic Transient Receptor Potential Vanilloid type 1 (TRPV1) channels, particular attention was paid in determining how the increased AEA tone influenced fear responses. Furthermore, it was investigated how the ECS modulated the effects of stress-sensitization on fear response. Thus, mice submitted or not to a social defeat stress protocol were treated with drugs acting on ECS, CB1 receptors or TRPV1 channels and tested in a contextual fear conditioning whose conditioning, retrieval and extinction phases were analyzed. ECS activation influenced the extinction process and contrasted the stress effects on fear memory. Furthermore, CB1 receptor antagonist blocked and TRPV1 channel antagonist promoted short- and long-term extinction. The present study indicates that ECS controls the extinction of aversive memories in the contextual fear conditioning.

  18. Species Turnover through Time: Colonization and Extinction Dynamics across Metacommunities.

    Science.gov (United States)

    Nuvoloni, Felipe Micali; Feres, Reinaldo José Fazzio; Gilbert, Benjamin

    2016-06-01

    Island biogeography and metacommunity theory often use equilibrium assumptions to predict local diversity, yet nonequilibrium dynamics are common in nature. In nonequilibrium communities, local diversity fluctuates through time as the relative importance of colonization and extinction change. Here, we test the prevalence and causes of nonequilibrium dynamics in metacommunities of mites associated with rubber trees distributed over large spatial (>1,000 km) and temporal (>30-60 generations) scales in Brazil. We measured colonization and extinction rates to test species turnover and nonequilibrium dynamics over a growing season. Mite metacommunities exhibited nonequilibrium dynamics for most months of the year, and these dynamics tracked climatic conditions. Monthly shifts in temperature of more than 1°C resulted in nonequilibrium dynamics, as did mean temperatures outside of two critical ranges. Nonequilibrium dynamics were caused by a change in colonization with temperature change and changes in both colonization and extinction with absolute temperature. Species turnover showed different trends; high relative humidity increased both colonization and extinction rates, increasing turnover but not nonequilibrium dynamics. Our study illustrates that testing nonequilibrium dynamics can provide new insights into the drivers of colonization, extinction, and diversity fluctuations in metacommunities.

  19. UV Extinction Towards a Quiescent Molecular Cloud in the SMC

    CERN Document Server

    Apellániz, J Maíz

    2012-01-01

    Context: The mean UV extinction law for the Small Magellanic Cloud (SMC) is usually taken as a template for low-metallicity galaxies. However, its current derivation is based on only five stars, thus placing doubts on its universality. An increase in the number of targets with measured extinction laws in the SMC is necessary to determine its possible dependence on parameters such as metallicity and star-forming activity. Aims: To measure the UV extinction law for several stars in the quiescent molecular cloud SMC B1-1. Methods: We obtained HST/STIS slitless UV spectroscopy of a 25"x25" field of view and we combined it with ground-based NIR and visible photometry of the stars in the field. The results were processed using the Bayesian photometric package CHORIZOS to derive the visible-NIR extinction values for each star. The unextinguished Spectral Energy Distributions (SEDs) obtained in this way were then used to derive the UV extinction law for the four most extinguished stars. We also recalculated the visib...

  20. An extinction curve template for intrinsically reddened quasars

    CERN Document Server

    Zafar, Tayyaba; Watson, Darach; Fynbo, Johan P U; Krogager, Jens-Kristian; Zafar, Nosheen; Saturni, Francesci G; Geier5, Stefan; Venemans, Bram P

    2015-01-01

    We analyze the near-infrared to UV data of 16 quasars with redshifts ranging from 0.71 $<$ $z$ $<$ 2.13 to investigate dust extinction properties. The sample presented in this work is obtained from the High $A_V$ Quasar (HAQ) survey. The quasar candidates were selected from the Sloan Digital Sky Survey (SDSS) and the UKIRT Infrared Deep Sky Survey (UKIDSS), and follow-up spectroscopy was carried out at the Nordic Optical Telescope (NOT) and the New Technology Telescope (NTT). To study dust extinction curves intrinsic to the quasars, from the HAQ survey we selected 16 cases where the Small Magellanic Cloud (SMC) law could not provide a good solution to the spectral energy distributions (SEDs). We derived the extinction curves using Fitzpatrick & Massa 1986 (FM) law by comparing the observed SEDs to the combined quasar template from Vanden Berk et al. 2001 and Glikman et al. 2006. The derived extinction, $A_V$, ranges from 0.2-1.0 mag. All the individual extinction curves of our quasars are steeper ($...

  1. Extragalactic interstellar extinction curves: Indicators of local physical conditions

    Energy Technology Data Exchange (ETDEWEB)

    Cecchi-Pestellini, Cesare [INAF-Osservatorio Astronomico di Palermo, P.zza Parlamento 1, I-90134 Palermo (Italy); Viti, Serena; Williams, David A., E-mail: cecchi-pestellini@astropa.unipa.it, E-mail: sv@star.ucl.ac.uk, E-mail: daw@star.ucl.ac.uk [Department of Physics and Astronomy, University College London Gower Street, London WC1E 6BT (United Kingdom)

    2014-06-20

    Normalized interstellar extinction curves (ISECs) in the Milky Way and other galaxies show a variety of shapes. This variety is attributed to differences along different sight lines in the abundances of the several dust and gas components contributing to extinction. In this paper we propose that these abundance differences are not arbitrary but are a specific consequence of the physical conditions on those sight lines. If this proposal is correct, then it implies that ISECs contain information about physical conditions in the regions generating extinction. This may be particularly important for high redshift galaxies where information on the conditions may be difficult to obtain. We adopt a model of extinction carriers in which the solid and gaseous components are not immutable but respond time-dependently to the local physics. We validate this model by fitting extinction curves measured on sight lines in the Magellanic Clouds and obtained for the gamma-ray burst afterglow GRB 080605. We present results for this model as follows: (1) we show that computed ISECs are controlled by a small number of physical parameters, (2) we demonstrate the sensitivity of computed ISECs to these parameters, (3) we compute as examples ISECs for particular galaxy types, and (4) we note that different galaxy types have different shapes of ISEC.

  2. Bidirectional Effects of Cannabidiol on Contextual Fear Memory Extinction

    Science.gov (United States)

    Song, Chenchen; Stevenson, Carl W.; Guimaraes, Francisco S.; Lee, Jonathan L. C.

    2016-01-01

    Cannabidiol (CBD) has been established to have both acute and long-lasting effects to reduce fear memory expression. The long-lasting impact might be mediated by an enhancement of memory extinction or an impairment of memory reconsolidation. Here, we directly compared the effects of i.p. injections of cannabidiol (10 mg/kg) with those of the NMDA receptor antagonist MK-801 (0.1 mg/kg) and partial agonist D-cycloserine (DCS; 15 mg/kg) in order to determine the mnemonic basis of long-term fear reduction. We showed that under conditions of strong fear conditioning, CBD reduced contextual fear memory expression both acutely during the extinction session as well as later at a fear retention test. The latter test reduction was replicated by DCS, but MK-801 instead elevated test freezing. In contrast, when initial conditioning was weaker, CBD and MK-801 had similar effects to increase freezing at the fear retention test relative to vehicle controls, whereas DCS had no observable impact. This pattern of results is consistent with CBD enhancing contextual fear memory extinction when the initial conditioning is strong, but impairing extinction when conditioning is weak. This bidirectional effect of CBD may be related to stress levels induced by conditioning and evoked at retrieval during extinction, rather than the strength of the memory per se. PMID:28018227

  3. Bidirectional effects of cannabidiol on contextual fear memory extinction

    Directory of Open Access Journals (Sweden)

    Chenchen Song

    2016-12-01

    Full Text Available Cannabidiol (CBD has been established to have both acute and long-lasting effects to reduce fear memory expression. The long-lasting impact might be mediated by an enhancement of memory extinction or an impairment of memory reconsolidation. Here, we directly compared the effects of i.p. injections of cannabidiol (10 mg/kg with those of the NMDA receptor antagonist MK-801 (0.1 mg/kg and partial agonist D-cycloserine (DCS; 15 mg/kg in order to determine the mnemonic basis of long-term fear reduction. We showed that under conditions of strong fear conditioning, CBD reduced contextual fear memory expression both acutely during the extinction session as well as later at a fear retention test. The latter test reduction was replicated by DCS, but MK-801 instead elevated test freezing. In contrast, when initial conditioning was weaker, CBD and MK-801 had similar effects to increase freezing at the fear retention test relative to vehicle controls, whereas DCS had no observable impact. This pattern of results is consistent with CBD enhancing contextual fear memory extinction when the initial conditioning is strong, but impairing extinction when conditioning is weak. This bidirectional effect of CBD may be related to stress levels induced by conditioning and evoked at retrieval during extinction, rather than the strength of the memory per se.

  4. On Galactic density modeling in the presence of dust extinction

    CERN Document Server

    Bovy, Jo; Green, Gregory M; Schlafly, Edward F; Finkbeiner, Douglas P

    2015-01-01

    Inferences about the spatial density or phase-space structure of stellar populations in the Milky Way require a precise determination of the effective survey volume. The volume observed by surveys such as Gaia or near-infrared spectroscopic surveys, which have good coverage of the Galactic mid-plane region, is highly complex because of the abundant small-scale structure in the three-dimensional interstellar dust extinction. We introduce a novel framework for analyzing the importance of small-scale structure in the extinction. This formalism demonstrates that the spatially-complex effect of extinction on the selection function of a pencil-beam or contiguous sky survey is equivalent to a low-pass filtering of the extinction-affected selection function with the smooth density field. We find that the angular resolution of current 3D extinction maps is sufficient for analyzing Gaia sub-samples of millions of stars. However, the current distance resolution is inadequate and needs to be improved by an order of magni...

  5. Do you know the extinction in your young massive cluster?

    CERN Document Server

    De Marchi, Guido; Sabbi, Elena

    2015-01-01

    Up to ages of ~100 Myr, massive clusters are still swamped in large amounts of gas and dust, with considerable and uneven levels of extinction. At the same time, large grains (ices?) produced by type II supernovae profoundly alter the interstellar medium (ISM), thus resulting in extinction properties very different from those of the diffuse ISM. To obtain physically meaningful parameters of stars, from basic luminosities and effective temperatures to masses and ages, we must understand and measure the local extinction law. This problem affects all the massive young clusters discussed in his volume. We have developed a powerful method to unambiguously determine the extinction law in an uniform way across a cluster field, using multi-band photometry of red giant stars belonging to the red clump (RC). In the Large Magellanic Cloud, with about 20 RC stars per arcmin^2, we can easily derive a solid and self-consistent absolute extinction curve over the entire wavelength range of the photometry. Here, we present th...

  6. How humans drive speciation as well as extinction.

    Science.gov (United States)

    Bull, J W; Maron, M

    2016-06-29

    A central topic for conservation science is evaluating how human activities influence global species diversity. Humanity exacerbates extinction rates. But by what mechanisms does humanity drive the emergence of new species? We review human-mediated speciation, compare speciation and known extinctions, and discuss the challenges of using net species diversity as a conservation objective. Humans drive rapid evolution through relocation, domestication, hunting and novel ecosystem creation-and emerging technologies could eventually provide additional mechanisms. The number of species relocated, domesticated and hunted during the Holocene is of comparable magnitude to the number of observed extinctions. While instances of human-mediated speciation are known, the overall effect these mechanisms have upon speciation rates has not yet been quantified. We also explore the importance of anthropogenic influence upon divergence in microorganisms. Even if human activities resulted in no net loss of species diversity by balancing speciation and extinction rates, this would probably be deemed unacceptable. We discuss why, based upon 'no net loss' conservation literature-considering phylogenetic diversity and other metrics, risk aversion, taboo trade-offs and spatial heterogeneity. We conclude that evaluating speciation alongside extinction could result in more nuanced understanding of biosphere trends, clarifying what it is we actually value about biodiversity.

  7. Calcium isotope constraints on the end-Permian mass extinction.

    Science.gov (United States)

    Payne, Jonathan L; Turchyn, Alexandra V; Paytan, Adina; Depaolo, Donald J; Lehrmann, Daniel J; Yu, Meiyi; Wei, Jiayong

    2010-05-11

    The end-Permian mass extinction horizon is marked by an abrupt shift in style of carbonate sedimentation and a negative excursion in the carbon isotope (delta(13)C) composition of carbonate minerals. Several extinction scenarios consistent with these observations have been put forward. Secular variation in the calcium isotope (delta(44/40)Ca) composition of marine sediments provides a tool for distinguishing among these possibilities and thereby constraining the causes of mass extinction. Here we report delta(44/40)Ca across the Permian-Triassic boundary from marine limestone in south China. The delta(44/40)Ca exhibits a transient negative excursion of approximately 0.3 per thousand over a few hundred thousand years or less, which we interpret to reflect a change in the global delta(44/40)Ca composition of seawater. CO(2)-driven ocean acidification best explains the coincidence of the delta(44/40)Ca excursion with negative excursions in the delta(13)C of carbonates and organic matter and the preferential extinction of heavily calcified marine animals. Calcium isotope constraints on carbon cycle calculations suggest that the average delta(13)C of CO(2) released was heavier than -28 per thousand and more likely near -15 per thousand; these values indicate a source containing substantial amounts of mantle- or carbonate-derived carbon. Collectively, the results point toward Siberian Trap volcanism as the trigger of mass extinction.

  8. Colloquium paper: extinction as the loss of evolutionary history.

    Science.gov (United States)

    Erwin, Douglas H

    2008-08-12

    Current plant and animal diversity preserves at most 1-2% of the species that have existed over the past 600 million years. But understanding the evolutionary impact of these extinctions requires a variety of metrics. The traditional measurement is loss of taxa (species or a higher category) but in the absence of phylogenetic information it is difficult to distinguish the evolutionary depth of different patterns of extinction: the same species loss can encompass very different losses of evolutionary history. Furthermore, both taxic and phylogenetic measures are poor metrics of morphologic disparity. Other measures of lost diversity include: functional diversity, architectural components, behavioral and social repertoires, and developmental strategies. The canonical five mass extinctions of the Phanerozoic reveals the loss of different, albeit sometimes overlapping, aspects of loss of evolutionary history. The end-Permian mass extinction (252 Ma) reduced all measures of diversity. The same was not true of other episodes, differences that may reflect their duration and structure. The construction of biodiversity reflects similarly uneven contributions to each of these metrics. Unraveling these contributions requires greater attention to feedbacks on biodiversity and the temporal variability in their contribution to evolutionary history. Taxic diversity increases after mass extinctions, but the response by other aspects of evolutionary history is less well studied. Earlier views of postextinction biotic recovery as the refilling of empty ecospace fail to capture the dynamics of this diversity increase.

  9. Middle-Late Permian mass extinction on land

    Energy Technology Data Exchange (ETDEWEB)

    Retallack, G.J.; Metzger, C.A.; Greaver, T.; Jahren, A.H.; Smith, R.M.H.; Sheldon, N.D. [University of Oregon, Eugene, OR (United States). Dept. of Geological Science

    2006-11-15

    The end-Permian mass extinction has been envisaged as the nadir of biodiversity decline due to increasing volcanic gas emissions over some 9 million years. We propose a different tempo and mechanism of extinction because we recognize two separate but geologically abrupt mass extinctions on land, one terminating the Middle Permian (Guadalupian) at 260.4 Ma and a later one ending the Permian Period at 251 Ma. Our evidence comes from new paleobotanical, paleopedological, and carbon isotopic studies of Portal Mountain, Antarctica, and comparable studies in the Karoo Basin, South Africa. Extinctions have long been apparent among marine invertebrates at both the end of the Guadalupian and end of the Permian, which were also times of warm-wet greenhouse climatic transients, marked soil erosion, transition from high- to low-sinuosity and braided streams, soil stagnation in wetlands, and profound negative carbon isotope anomalies. Both mass extinctions may have resulted from catastrophic methane outbursts to the atmosphere from coal intruded by feeder dikes to flood basalts, such as the end-Guadalupian Emeishan Basalt and end-Permian Siberian Traps.

  10. Research and Development for the Mu2e Extinction Monitor

    Energy Technology Data Exchange (ETDEWEB)

    Mott, Casey Benjamin [Northern Illinois U.

    2016-01-01

    Mu2e is a planned experiment to search for flavor-violating conversion from a muon to an electron. The experiment will use a pulsed 8 GeV proton beam to produce muons which will then stop in an aluminum target. Mu2e will search for the $\\mu^- + Al \\rightarrow e^- + Al$ process. For Mu2e, an extinction rate of 10$^{-10}$ is required to reduce the backgrounds to an acceptable level. Extinction is the ratio of the amount of protons striking the production target between beam pulses to the number striking it during the beam pulse. One of the backgrounds, off-target interactions, was simulated using G4beamline and Fermilab's Grid setup to confirm that an extinction rate of 10$^{-10}$ is possible. The extinction level will be measured by the extinction monitor which will include scintillation counters read out by photomultiplier tubes. In order to build a beam time profile, low fake responses (after pulses) are needed in the photomultiplier tubes. This thesis determines the best combination of resistors, voltage, and other components that provide the lowest after pulse rate.

  11. Mid-Infrared Extinction and its Variation with Galactic Longitude

    CERN Document Server

    Gao, Jian; Li, A

    2009-01-01

    Based on the data obtained from the Spitzer/GLIPMSE Legacy Program and the 2MASS project, we derive the extinction in the four IRAC bands, [3.6], [4.5], [5.8] and [8.0] micron, relative to the 2MASS Ks band (at 2.16 micron) for 131 GLIPMSE fields along the Galactic plane within |l|<65 deg, using red giants and red clump giants as tracers. As a whole, the mean extinction in the IRAC bands (normalized to the 2MASS Ks band), A_[3.6]/A_Ks=0.63, A_[4.5]/A_Ks=0.57, A_[5.8]/A_Ks=0.49, A_[8.0]/A_Ks=0.55, exhibits little variation with wavelength (i.e. the extinction is somewhat flat or gray). This is consistent with previous studies and agrees with that predicted from the standard interstellar grain model for R_V=5.5 by Weingartner & Draine (2001). As far as individual sightline is concerned, however, the wavelength dependence of the mid-infrared interstellar extinction A_{lambda}/A_Ks varies from one sightline to another, suggesting that there may not exist a "universal" IR extinction law. We, for the first t...

  12. How humans drive speciation as well as extinction

    Science.gov (United States)

    Maron, M.

    2016-01-01

    A central topic for conservation science is evaluating how human activities influence global species diversity. Humanity exacerbates extinction rates. But by what mechanisms does humanity drive the emergence of new species? We review human-mediated speciation, compare speciation and known extinctions, and discuss the challenges of using net species diversity as a conservation objective. Humans drive rapid evolution through relocation, domestication, hunting and novel ecosystem creation—and emerging technologies could eventually provide additional mechanisms. The number of species relocated, domesticated and hunted during the Holocene is of comparable magnitude to the number of observed extinctions. While instances of human-mediated speciation are known, the overall effect these mechanisms have upon speciation rates has not yet been quantified. We also explore the importance of anthropogenic influence upon divergence in microorganisms. Even if human activities resulted in no net loss of species diversity by balancing speciation and extinction rates, this would probably be deemed unacceptable. We discuss why, based upon ‘no net loss’ conservation literature—considering phylogenetic diversity and other metrics, risk aversion, taboo trade-offs and spatial heterogeneity. We conclude that evaluating speciation alongside extinction could result in more nuanced understanding of biosphere trends, clarifying what it is we actually value about biodiversity. PMID:27358365

  13. Extinction of drug cue reactivity in methamphetamine-dependent individuals.

    Science.gov (United States)

    Price, Kimber L; Saladin, Michael E; Baker, Nathaniel L; Tolliver, Bryan K; DeSantis, Stacia M; McRae-Clark, Aimee L; Brady, Kathleen T

    2010-09-01

    Conditioned responses to drug-related environmental cues (such as craving) play a critical role in relapse to drug use. Animal models demonstrate that repeated exposure to drug-associated cues in the absence of drug administration leads to the extinction of conditioned responses, but the few existing clinical trials focused on extinction of conditioned responses to drug-related cues in drug-dependent individuals show equivocal results. The current study examined drug-related cue reactivity and response extinction in a laboratory setting in methamphetamine-dependent individuals. Methamphetamine cue-elicited craving was extinguished during two sessions of repeated (3) within-session exposures to multi-modal (picture, video, and in-vivo) cues, with no evidence of spontaneous recovery between sessions. A trend was noted for a greater attenuation of response in participants with longer (4-7 day) inter-session intervals. These results indicate that extinction of drug cue conditioned responding occurs in methamphetamine-dependent individuals, offering promise for the development of extinction- based treatment strategies.

  14. Extinction and ecological retreat in a community of primates

    Energy Technology Data Exchange (ETDEWEB)

    Crowley, B. E.; Godfrey, L. R.; Guilderson, T. P.; Zermeno, P.; Koch, P. L.; Dominy, N. J.

    2012-05-23

    The lemurs of Madagascar represent a prodigious adaptive radiation. At least 17 species ranging from 11 to 160 kg have become extinct during the past 2000 years. The effect of this loss on contemporary lemurs is unknown. The concept of competitive release favours the expansion of living species into vacant niches. Alternatively, factors that triggered the extinction of some species could have also reduced community-wide niche breadth. Here, we use radiocarbon and stable isotope data to examine temporal shifts in the niches of extant lemur species following the extinction of eight large-bodied species. We focus on southwestern Madagascar and report profound isotopic shifts, both from the time when now-extinct lemurs abounded and from the time immediately following their decline to the present. Unexpectedly, the past environments exploited by lemurs were drier than the protected (albeit often degraded) riparian habitats assumed to be ideal for lemurs today. Neither competitive release nor niche contraction can explain these observed trends. We develop an alternative hypothesis: ecological retreat, which suggests that factors surrounding extinction may force surviving species into marginal or previously unfilled niches.

  15. Research and development for the Mu2E extinction monitor

    Science.gov (United States)

    Mott, Casey B.

    Mu2e is a planned experiment to search for flavor violating conversion from a muon to an electron. The experiment will use a pulsed 8 GeV proton beam to produce muons which will then stop in an aluminum target. Mu2e will search for the mu-- + Al → e-- + Al process. For Mu2e, an extinction rate of 10--10 is required to reduce the backgrounds to an acceptable level. Extinction is the ratio of the amount of protons striking the production target between beam pulses to the number striking it during the beam pulse. One of the backgrounds, off-target interactions, was simulated using G4beamline and Fermilab's Grid setup to confirm that an extinction rate of 10--10 is possible. The extinction level will be measured by the extinction monitor which will include scintillation counters read out by photomultiplier tubes. In order to build a beam time profile, low fake responses (after pulses) are needed in the photomultiplier tubes. This thesis determines the best combination of resistors, voltage, and other components that provide the lowest after pulse rate.

  16. A Galactic Plane Relative Extinction Map from 2MASS

    CERN Document Server

    Fröbrich, D; Murphy, G C; Scholz, A

    2005-01-01

    We present three 14400 square degree relative extinction maps of the Galactic Plane (|b|<20degrees) obtained from 2MASS using accumulative star counts (Wolf diagrams). This method is independent of the colour of the stars and the variation of extinction with wavelength. Stars were counted in 3.5'x3.5' boxes, every 20". 1x1degree surrounding fields were chosen for reference, hence the maps represent local extinction enhancements and ignore any contribution from the ISM or very large clouds. Data reduction was performed on a Beowulf-type cluster (in approximately 120 hours). Such a cluster is ideal for this type of work as areas of the sky can be independently processed in parallel. We studied how extinction depends on wavelength in all of the high extinction regions detected and within selected dark clouds. On average a power law opacity index (\\beta) of 1.0 to 1.8 in the NIR was deduced. The index however differed significantly from region to region and even within individual dark clouds. That said, genera...

  17. 3D Interstellar Extinction Map within the Nearest Kiloparsec

    CERN Document Server

    Gontcharov, George

    2016-01-01

    The product of the previously constructed 3D maps of stellar reddening (Gontcharov 2010) and $R_V$ variations (Gontcharov 2012) has allowed us to produce a 3D interstellar extinction map within the nearest kiloparsec from the Sun with a spatial resolution of 50 pc and an accuracy of $0.2^m$. This map is compared with the 2D reddening map by Schlegel et al. (1998), the 3D extinction map at high latitudes by Jones et al. (2011), and the analytical extinction models by Arenou et al. (1992) and Gontcharov (2009). In all cases, we have found good agreement and show that there are no systematic errors in the new map everywhere except the direction toward the Galactic center. We have found that the map by Schlegel et al. (1998) reaches saturation near the Galactic equator at $E_{(B-V)}>0.8^m$, has a zero-point error and systematic errors gradually increasing with reddening, and among the analytical models those that take into account the extinction in the Gould Belt are more accurate. Our extinction map shows that i...

  18. An Extinction Study of the Taurus Dark Cloud Complex

    CERN Document Server

    Arce, H G; Arce, Hector G.; Goodman, Alyssa A.

    1999-01-01

    We present a study of the detailed distribution of extinction in a region of the Taurus dark cloud complex. Our study uses new BVR images of the region, spectral classification data for 95 stars, and IRAS Sky Survey Atlas (ISSA) 60 and 100 micron images. We study the extinction of the region in four different ways, and we present the first inter-comparison of all these methods, which are: 1) using the color excess of background stars for which spectral types are known; 2) using the ISSA 60 and 100 micron images; 3) using star counts; and 4) using an optical (V and R) version of the average color excess method used by Lada et al. (1994). We find that all four methods give generally similar results, with important exceptions. To study the structure in the dust distribution, we compare the ISSA extinction and the extinction measured for individual stars. From the comparison, we conclude that in the relatively low extinction regions studied, with 0.9 < A_V < 3.0 mag (away from filamentary dark clouds and IR...

  19. Vertebrate extinctions and survival across the Cretaceous-Tertiary boundary

    Science.gov (United States)

    Buffetaut, Eric

    1990-01-01

    A critical analysis of the fossil vertebrate record across the Cretaceous-Tertiary boundary shows that the available evidence is far less accurate than that concerning invertebrates and microfossils. Far-reaching conclusions have been drawn from generalisations about vertebrate extinctions in the continental realm based on the local record from western North America, but little is known about patterns of terminal Cretaceous vertebrate extinctions in other parts of the world, and even the western North American record is ambiguous. Despite this unsatisfactory record, it clearly appears that terminal Cretaceous vertebrate extinctions were highly selective, with some groups (e.g. dinosaurs) becoming completely extinct, whereas others seem to be virtually unaffected. This argues against devastating catastrophes of the kind postulated by some recent impact scenarios. However, the survival of groups known to be sensitive to climatic deterioration (such as crocodilians and other non-dinosaurian reptiles) indicates that alternative hypotheses involving gradual but fairly important climatic changes on a world-wide scale are not convincing either. The pattern of extinction and survival among vertebrates across the Cretaceous-Tertiary boundary may be explained as a consequence of the disruption of some food chains following a crisis in the plant kingdom, which itself may have been the result of the atmospheric consequences of unusual extraterrestrial or internal events.

  20. Quantifying variation in speciation and extinction rates with clade data.

    Science.gov (United States)

    Paradis, Emmanuel; Tedesco, Pablo A; Hugueny, Bernard

    2013-12-01

    High-level phylogenies are very common in evolutionary analyses, although they are often treated as incomplete data. Here, we provide statistical tools to analyze what we name "clade data," which are the ages of clades together with their numbers of species. We develop a general approach for the statistical modeling of variation in speciation and extinction rates, including temporal variation, unknown variation, and linear and nonlinear modeling. We show how this approach can be generalized to a wide range of situations, including testing the effects of life-history traits and environmental variables on diversification rates. We report the results of an extensive simulation study to assess the performance of some statistical tests presented here as well as of the estimators of speciation and extinction rates. These latter results suggest the possibility to estimate correctly extinction rate in the absence of fossils. An example with data on fish is presented.

  1. Biodiversity, extinctions, and evolution of ecosystems with shared resources

    Science.gov (United States)

    Kozlov, Vladimir; Vakulenko, Sergey; Wennergren, Uno

    2017-03-01

    We investigate the formation of stable ecological networks where many species share the same resource. We show that such a stable ecosystem naturally occurs as a result of extinctions. We obtain an analytical relation for the number of coexisting species, and we find a relation describing how many species that may become extinct as a result of a sharp environmental change. We introduce a special parameter that is a combination of species traits and resource characteristics used in the model formulation. This parameter describes the pressure on the system to converge, by extinctions. When that stress parameter is large, we obtain that the species traits are concentrated at certain values. This stress parameter is thereby a parameter that determines the level of final biodiversity of the system. Moreover, we show that the dynamics of this limit system can be described by simple differential equations.

  2. An Empirical Relation between Sodium Absorption and Dust Extinction

    CERN Document Server

    Poznanski, Dovi; Bloom, Joshua S

    2012-01-01

    Dust extinction and reddening are ubiquitous in astronomical observations and are often a major source of systematic uncertainty. We present here a study of the correlation between extinction in the Milky Way and the equivalent width of the NaI D absorption doublet. Our sample includes more than 100 high resolution spectra from the KECK telescopes and nearly a million low resolution spectra from the Sloan Digital Sky Survey (SDSS). We measure the correlation to unprecedented precision, constrain its shape, and derive an empirical relation between these quantities with a dispersion of order 0.15 magnitude in E(B-V). From the shape of the curve of growth we further show that a typical sight line through the Galaxy crosses about three dust clouds. We provide a brief guide on how to best estimate extinction to extragalactic sources such as supernovae, using the NaI D absorption feature, under a variety of circumstances.

  3. Ocean acidification and the Permo-Triassic mass extinction

    Science.gov (United States)

    Clarkson, M. O.; Kasemann, S. A.; Wood, R. A.; Lenton, T. M.; Daines, S. J.; Richoz, S.; Ohnemueller, F.; Meixner, A.; Poulton, S. W.; Tipper, E. T.

    2015-04-01

    Ocean acidification triggered by Siberian Trap volcanism was a possible kill mechanism for the Permo-Triassic Boundary mass extinction, but direct evidence for an acidification event is lacking. We present a high-resolution seawater pH record across this interval, using boron isotope data combined with a quantitative modeling approach. In the latest Permian, increased ocean alkalinity primed the Earth system with a low level of atmospheric CO2 and a high ocean buffering capacity. The first phase of extinction was coincident with a slow injection of carbon into the atmosphere, and ocean pH remained stable. During the second extinction pulse, however, a rapid and large injection of carbon caused an abrupt acidification event that drove the preferential loss of heavily calcified marine biota.

  4. A Galactic Plane relative extinction map from 2MASS

    Science.gov (United States)

    Froebrich, D.; Ray, T. P.; Murphy, G. C.; Scholz, A.

    2005-03-01

    We present three 14 400 square degree relative extinction maps of the Galactic Plane (|b| Beowulf-type cluster (in approximately 120 hours). Such a cluster is ideal for this type of work as areas of the sky can be independently processed in parallel. We studied how extinction depends on wavelength in all of the high extinction regions detected and within selected dark clouds. On average a power law opacity index (β) of 1.0 to 1.8 in the NIR was deduced. The index however differed significantly from region to region and even within individual dark clouds. That said, generally it was found to be constant, or to increase, with wavelength within a particular region.

  5. Ocean acidification and the Permo-Triassic mass extinction.

    Science.gov (United States)

    Clarkson, M O; Kasemann, S A; Wood, R A; Lenton, T M; Daines, S J; Richoz, S; Ohnemueller, F; Meixner, A; Poulton, S W; Tipper, E T

    2015-04-10

    Ocean acidification triggered by Siberian Trap volcanism was a possible kill mechanism for the Permo-Triassic Boundary mass extinction, but direct evidence for an acidification event is lacking. We present a high-resolution seawater pH record across this interval, using boron isotope data combined with a quantitative modeling approach. In the latest Permian, increased ocean alkalinity primed the Earth system with a low level of atmospheric CO2 and a high ocean buffering capacity. The first phase of extinction was coincident with a slow injection of carbon into the atmosphere, and ocean pH remained stable. During the second extinction pulse, however, a rapid and large injection of carbon caused an abrupt acidification event that drove the preferential loss of heavily calcified marine biota.

  6. Some properties of superprocesses conditioned on non-extinction

    Institute of Scientific and Technical Information of China (English)

    LIU RongLi; REN YanXia

    2009-01-01

    We simply call a superprocess conditioned on non-extinction a conditioned superprocess. In this study, we investigate some properties of the conditioned superprocesses (subcritical or critical). Firstly, we give an equivalent description of the probability of the event that the total occupation time measure on a compact set is finite and some applications of this equivalent description. Our results are extensions of those of Krone (1995) from particular branching mechanisms to general branching mechanisms. We also prove a claim of Krone for the cases of d = 3, 4. Secondly, we study the local extinction property of the conditioned binary super-Brownian motion {Xt, Pμ∞}. When d = 1, as t variable and λ is the Lebesgue measure on R. When d ≥ 2, the conditioned binary super-Brownian motion is locally extinct under Pμ∞.

  7. How humans drive speciation as well as extinction

    DEFF Research Database (Denmark)

    Bull, Joseph William; Maron, M.

    2016-01-01

    A central topic for conservation science is evaluating how human activities influence global species diversity. Humanity exacerbates extinction rates. But by what mechanisms does humanity drive the emergence of new species? We review human-mediated speciation, compare speciation and known...... extinctions, and discuss the challenges of using net species diversity as a conservation objective. Humans drive rapid evolution through relocation, domestication, hunting and novel ecosystem creation—and emerging technologies could eventually provide additional mechanisms. The number of species relocated......, domesticated and hunted during the Holocene is of comparable magnitude to the number of observed extinctions. While instances of human-mediated speciation are known, the overall effect these mechanisms have upon speciation rates has not yet been quantified. We also explore the importance of anthropogenic...

  8. Modelling extragalactic extinction through gamma-ray burst afterglows

    CERN Document Server

    Zonca, Alberto; Mulas, Giacomo; Casu, Silvia; Aresu, Giambattista

    2016-01-01

    We analyze extragalactic extinction pro?les derived through gamma-ray burst afterglows, using a dust model speci?cally constructed on the assumption that dust grains are not immutable but respond time-dependently to the local physics. Such a model includes core-mantle spherical particles of mixed chemical composition (silicate core, sp2 and sp3 carbonaceous layers), and an additional molecular component, in the form of free-flying polycyclic aromatic hydrocarbons. We fit most of the observed extinction pro?les. Failures occur for lines of sight presenting remarkable rises blueward the bump. We find a tendency in the carbon chemical structure to become more aliphatic with the galactic activity, and to some extent with increasing redshifts. Moreover, the contribution of the moleclar component to the total extinction is more important in younger objects. The results of the ?tting procedure (either successes and failures) may be naturally interpreted through an evolutionary prescription based on the carbon cycle ...

  9. Mid Pleistocene foraminiferal mass extinction coupled with phytoplankton evolution

    Science.gov (United States)

    Kender, Sev; McClymont, Erin L.; Elmore, Aurora C.; Emanuele, Dario; Leng, Melanie J.; Elderfield, Henry

    2016-06-01

    Understanding the interaction between climate and biotic evolution is crucial for deciphering the sensitivity of life. An enigmatic mass extinction occurred in the deep oceans during the Mid Pleistocene, with a loss of over 100 species (20%) of sea floor calcareous foraminifera. An evolutionarily conservative group, benthic foraminifera often comprise >50% of eukaryote biomass on the deep-ocean floor. Here we test extinction hypotheses (temperature, corrosiveness and productivity) in the Tasman Sea, using geochemistry and micropalaeontology, and find evidence from several globally distributed sites that the extinction was caused by a change in phytoplankton food source. Coccolithophore evolution may have enhanced the seasonal `bloom' nature of primary productivity and fundamentally shifted it towards a more intra-annually variable state at ~0.8 Ma. Our results highlight intra-annual variability as a potential new consideration for Mid Pleistocene global biogeochemical climate models, and imply that deep-sea biota may be sensitive to future changes in productivity.

  10. The Extinction and Return of Fear of Public Speaking.

    Science.gov (United States)

    Laborda, Mario A; Schofield, Casey A; Johnson, Emily M; Schubert, Jessica R; George-Denn, Daniel; Coles, Meredith E; Miller, Ralph R

    2016-11-01

    Prior studies indicate extinguished fear often partially returns when participants are later tested outside the extinction context. Cues carried from the extinction context to the test context sometimes reduce return of fear, but it is unclear whether such extinction cues (ECs) reduce return of fear of public speaking. Here we assessed return of fear of public speaking, and whether either of two types of ECs can attenuate it. Participants gave speeches of increasing difficulty during an exposure practice session and were tested 2 days later in a different context. Testing occurred in the presence of physical ECs, after mentally rehearsing the exposure session, or without either reminder. Practice reduced fear of public speaking, but fear partially returned at test. Neither physical nor mental ECs reduced partial return of fear of public speaking. The return of extinguished fear of public speaking, although small, was reliable, but not appreciably sensitive to presence of ECs.

  11. Macroecological analyses support an overkill scenario for late Pleistocene extinctions

    Directory of Open Access Journals (Sweden)

    J. A. F. Diniz-Filho

    Full Text Available The extinction of megafauna at the end of Pleistocene has been traditionally explained by environmental changes or overexploitation by human hunting (overkill. Despite difficulties in choosing between these alternative (and not mutually exclusive scenarios, the plausibility of the overkill hypothesis can be established by ecological models of predator-prey interactions. In this paper, I have developed a macroecological model for the overkill hypothesis, in which prey population dynamic parameters, including abundance, geographic extent, and food supply for hunters, were derived from empirical allometric relationships with body mass. The last output correctly predicts the final destiny (survival or extinction for 73% of the species considered, a value only slightly smaller than those obtained by more complex models based on detailed archaeological and ecological data for each species. This illustrates the high selectivity of Pleistocene extinction in relation to body mass and confers more plausibility on the overkill scenario.

  12. Phylogenetic relationships of living and recently extinct bandicoots based on nuclear and mitochondrial DNA sequences.

    Science.gov (United States)

    Westerman, M; Kear, B P; Aplin, K; Meredith, R W; Emerling, C; Springer, M S

    2012-01-01

    Bandicoots (Peramelemorphia) are a major order of australidelphian marsupials, which despite a fossil record spanning at least the past 25 million years and a pandemic Australasian range, remain poorly understood in terms of their evolutionary relationships. Many living peramelemorphians are critically endangered, making this group an important focus for biological and conservation research. To establish a phylogenetic framework for the group, we compiled a concatenated alignment of nuclear and mitochondrial DNA sequences, comprising representatives of most living and recently extinct species. Our analysis confirmed the currently recognised deep split between Macrotis (Thylacomyidae), Chaeropus (Chaeropodidae) and all other living bandicoots (Peramelidae). The mainly New Guinean rainforest peramelids were returned as the sister clade of Australian dry-country species. The wholly New Guinean Peroryctinae was sister to Echymiperinae. The poorly known and perhaps recently extinct Seram Bandicoot (Rhynchomeles) is sister to Echymipera. Estimates of divergence times from relaxed-clock Bayesian methods suggest that living bandicoots originated in the late Oligocene or early Miocene, much earlier than currently thought based on fossils. Subsequent radiations within Peramelemorphia probably took place on the Australian mainland during the Miocene, with diversification of rainforest taxa on the newly emergent New Guinean landmasses through the middle-late Miocene and complete establishment of modern lineages by the early Pliocene.

  13. Persistence versus extinction for a class of discrete-time structured population models.

    Science.gov (United States)

    Jin, Wen; Smith, Hal L; Thieme, Horst R

    2016-03-01

    We provide sharp conditions distinguishing persistence and extinction for a class of discrete-time dynamical systems on the positive cone of an ordered Banach space generated by a map which is the sum of a positive linear contraction A and a nonlinear perturbation G that is compact and differentiable at zero in the direction of the cone. Such maps arise as year-to-year projections of population age, stage, or size-structure distributions in population biology where typically A has to do with survival and individual development and G captures the effects of reproduction. The threshold distinguishing persistence and extinction is the principal eigenvalue of (II−A)(−1)G'(0) provided by the Krein-Rutman Theorem, and persistence is described in terms of associated eigenfunctionals. Our results significantly extend earlier persistence results of the last two authors which required more restrictive conditions on G. They are illustrated by application of the results to a plant model with a seed bank.

  14. Adaptation, plasticity, and extinction in a changing environment: towards a predictive theory.

    Directory of Open Access Journals (Sweden)

    Luis-Miguel Chevin

    Full Text Available Many species are experiencing sustained environmental change mainly due to human activities. The unusual rate and extent of anthropogenic alterations of the environment may exceed the capacity of developmental, genetic, and demographic mechanisms that populations have evolved to deal with environmental change. To begin to understand the limits to population persistence, we present a simple evolutionary model for the critical rate of environmental change beyond which a population must decline and go extinct. We use this model to highlight the major determinants of extinction risk in a changing environment, and identify research needs for improved predictions based on projected changes in environmental variables. Two key parameters relating the environment to population biology have not yet received sufficient attention. Phenotypic plasticity, the direct influence of environment on the development of individual phenotypes, is increasingly considered an important component of phenotypic change in the wild and should be incorporated in models of population persistence. Environmental sensitivity of selection, the change in the optimum phenotype with the environment, still crucially needs empirical assessment. We use environmental tolerance curves and other examples of ecological and evolutionary responses to climate change to illustrate how these mechanistic approaches can be developed for predictive purposes.

  15. Ranavirus could facilitate local extinction of rare amphibian species.

    Science.gov (United States)

    Earl, Julia E; Chaney, Jordan C; Sutton, William B; Lillard, Carson E; Kouba, Andrew J; Langhorne, Cecilia; Krebs, Jessi; Wilkes, Rebecca P; Hill, Rachel D; Miller, Debra L; Gray, Matthew J

    2016-10-01

    There is growing evidence that pathogens play a role in population declines and species extinctions. For small populations, disease-induced extinction may be especially probable. We estimated the susceptibility of two amphibian species of conservation concern (the dusky gopher frog [Lithobates sevosus] and boreal toad [Anaxyrus boreas boreas]) to an emerging pathogen (ranavirus) using laboratory challenge experiments, and combined these data with published demographic parameter estimates to simulate the potential effects of ranavirus exposure on extinction risk. We included effects of life stage during pathogen exposure, pathogen exposure interval, hydroperiod of breeding habitat, population carrying capacity, and immigration in simulations. We found that both species were highly susceptible to ranavirus when exposed to the pathogen in water at environmentally relevant concentrations. Dusky gopher frogs experienced 100 % mortality in four of six life stages tested. Boreal toads experienced 100 % mortality when exposed as tadpoles or metamorphs, which were the only life stages tested. Simulations showed population declines, greater extinction probability, and faster times to extinction with ranavirus exposure. These effects were more evident with more frequent pathogen exposure intervals and lower carrying capacity. Immigration at natural rates did little to mitigate effects of ranavirus exposure unless immigration occurred every 2 years. Our results demonstrate that disease-induced extinction by emerging pathogens, such as ranavirus, is possible, and that threat may be especially high for species with small population sizes. For the species in this study, conservation organizations should incorporate ranavirus surveillance into monitoring programs and devise intervention strategies in the event that disease outbreaks occur.

  16. Adaptive radiation of multituberculate mammals before the extinction of dinosaurs.

    Science.gov (United States)

    Wilson, Gregory P; Evans, Alistair R; Corfe, Ian J; Smits, Peter D; Fortelius, Mikael; Jernvall, Jukka

    2012-03-14

    The Cretaceous-Paleogene mass extinction approximately 66 million years ago is conventionally thought to have been a turning point in mammalian evolution. Prior to that event and for the first two-thirds of their evolutionary history, mammals were mostly confined to roles as generalized, small-bodied, nocturnal insectivores, presumably under selection pressures from dinosaurs. Release from these pressures, by extinction of non-avian dinosaurs at the Cretaceous-Paleogene boundary, triggered ecological diversification of mammals. Although recent individual fossil discoveries have shown that some mammalian lineages diversified ecologically during the Mesozoic era, comprehensive ecological analyses of mammalian groups crossing the Cretaceous-Paleogene boundary are lacking. Such analyses are needed because diversification analyses of living taxa allow only indirect inferences of past ecosystems. Here we show that in arguably the most evolutionarily successful clade of Mesozoic mammals, the Multituberculata, an adaptive radiation began at least 20 million years before the extinction of non-avian dinosaurs and continued across the Cretaceous-Paleogene boundary. Disparity in dental complexity, which relates to the range of diets, rose sharply in step with generic richness and disparity in body size. Moreover, maximum dental complexity and body size demonstrate an adaptive shift towards increased herbivory. This dietary expansion tracked the ecological rise of angiosperms and suggests that the resources that were available to multituberculates were relatively unaffected by the Cretaceous-Paleogene mass extinction. Taken together, our results indicate that mammals were able to take advantage of new ecological opportunities in the Mesozoic and that at least some of these opportunities persisted through the Cretaceous-Paleogene mass extinction. Similar broad-scale ecomorphological inventories of other radiations may help to constrain the possible causes of mass extinctions.

  17. Broadband measurements of aerosol extinction in the ultraviolet spectral region

    Science.gov (United States)

    Washenfelder, R. A.; Flores, J. M.; Brock, C. A.; Brown, S. S.; Rudich, Y.

    2013-04-01

    Aerosols influence the Earth's radiative budget by scattering and absorbing incoming solar radiation. The optical properties of aerosols vary as a function of wavelength, but few measurements have reported the wavelength dependence of aerosol extinction cross sections and complex refractive indices. We describe a new laboratory instrument to measure aerosol optical extinction as a function of wavelength, using cavity enhanced spectroscopy with a broadband light source. The instrument consists of two broadband channels which span the 360-390 and 385-420 nm spectral regions using two light emitting diodes (LED) and a grating spectrometer with charge-coupled device (CCD) detector. We determined aerosol extinction cross sections and directly observed Mie scattering resonances for aerosols that are purely scattering (polystyrene latex spheres and ammonium sulfate), slightly absorbing (Suwannee River fulvic acid), and strongly absorbing (nigrosin dye). We describe an approach for retrieving refractive indices as a function of wavelength from the measured extinction cross sections over the 360-420 nm wavelength region. The retrieved refractive indices for PSL and ammonium sulfate agree within uncertainty with the literature values for this spectral region. The refractive index determined for nigrosin is 1.78 (± 0.03) + 0.19 (± 0.08)i at 360 nm and 1.63 (± 0.03) + 0.21 (± 0.05)i at 420 nm. The refractive index determined for Suwannee River fulvic acid is 1.71 (± 0.02) + 0.07 (± 0.06)i at 360 nm and 1.66 (± 0.02) + 0.06 (± 0.04)i at 420 nm. These laboratory results support the potential for a field instrument capable of determining ambient aerosol optical extinction, average aerosol extinction cross section, and complex refractive index as a function of wavelength.

  18. Lessons from the past: evolutionary impacts of mass extinctions.

    Science.gov (United States)

    Jablonski, D

    2001-05-01

    Mass extinctions have played many evolutionary roles, involving differential survivorship or selectivity of taxa and traits, the disruption or preservation of evolutionary trends and ecosystem organization, and the promotion of taxonomic and morphological diversifications-often along unexpected trajectories-after the destruction or marginalization of once-dominant clades. The fossil record suggests that survivorship during mass extinctions is not strictly random, but it often fails to coincide with factors promoting survival during times of low extinction intensity. Although of very serious concern, present-day extinctions have not yet achieved the intensities seen in the Big Five mass extinctions of the geologic past, which each removed > or =50% of the subset of relatively abundant marine invertebrate genera. The best comparisons for predictive purposes therefore will involve factors such as differential extinction intensities among regions, clades, and functional groups, rules governing postextinction biotic interchanges and evolutionary dynamics, and analyses of the factors that cause taxa and evolutionary trends to continue unabated, to suffer setbacks but resume along the same trajectory, to survive only to fall into a marginal role or disappear ("dead clade walking"), or to undergo a burst of diversification. These issues need to be addressed in a spatially explicit framework, because the fossil record suggests regional differences in postextinction diversification dynamics and biotic interchanges. Postextinction diversifications lag far behind the initial taxonomic and morphological impoverishment and homogenization; they do not simply reoccupy vacated adaptive peaks, but explore opportunities as opened and constrained by intrinsic biotic factors and the ecological and evolutionary context of the radiation.

  19. Triassic-Jurassic Mass Extinction: Evidence for Bolide Impact?

    Science.gov (United States)

    Perry, R.; Becker, L.; Haggart, J.; Poreda, R.

    2003-04-01

    The Triassic-Jurassic (TJ) mass extinction event is one of the most severe in geologic history and is one of the five largest in the Phanerozoic with as many as 80% of the species lost. It is also one of the most poorly understood. Only a few geologic sections have been identified for the TJ extinction and most of those are not well preserved. Previously, the paucity of suitable stratigraphic sections has prevented corroborative geochemical studies. Recently a well-preserved stratigraphic section spanning the Triassic-Jurassic boundary (˜200 mya) was identified at Kennecott Point, Queen Charlotte, Islands, British Columbia. Initial studies have shown that the Kennecott Point sequence is one of the best preserved and contains one of the most complete radiolarian microfossil turnovers known. Analyses of stable isotopes have shown that a 13C perturbation exits within the sequence and suggests a decline in organic productivity (Ward et al., 2001). Preliminary results of laser desorption mass spectrometry (LDMS) of selected Queen Charlotte samples suggest that fullerenes (C60 to C200) may be present in the Kennecott Point stratigraphic sequence. Previous studies have shown that fullerenes are present in the mass extinction boundary of the Permian-Triassic (˜251 mya) as well as the well-known "dinosaur" extinction event of the Cretaceous-Tertiary (˜65 mya). Therefore, three of the big five extinction events appear to have associated fullerenes. The possible presence of fullerenes along with the productivity collapse (rapid environmental change) suggests that a cometary or asteroidal impact may have occurred. Although no known impact crater exists, we hope to present chemical evidence that an impact or multiple impacts may have been responsible for the TJ mass extinction.

  20. Transient inactivation of the pigeon hippocampus or the nidopallium caudolaterale during extinction learning impairs extinction retrieval in an appetitive conditioning paradigm.

    Science.gov (United States)

    Lengersdorf, Daniel; Stüttgen, Maik C; Uengoer, Metin; Güntürkün, Onur

    2014-05-15

    The majority of experiments exploring context-dependent extinction learning employ Pavlovian fear conditioning in rodents. Since mechanisms of appetitive and aversive learning are known to differ at the neuronal level, we sought to investigate extinction learning in an appetitive setting. Working with pigeons, we established a within-subject ABA renewal paradigm based on Rescorla (Q J Exp Psychol 61:1793) and combined it with pharmacological interventions during extinction. From the fear conditioning literature, it is known that both prefrontal cortex and the hippocampus are core structures for context-specific extinction learning. Accordingly, we transiently inactivated the nidopallium caudolaterale (NCL, a functional analogue of mammalian prefrontal cortex) and the hippocampus in separate experiments by intracranial infusion of the sodium-channel blocker tetrodotoxin immediately before extinction training. We find that TTX in both structures non-specifically suppresses conditioned responding, as revealed by a reduction of response rate to both the extinguished conditioned stimulus and a control stimulus which remained reinforced throughout the experiment. Furthermore, TTX during extinction training impaired later extinction retrieval assessed under drug-free conditions. This was true when responding to the extinguished stimulus was assessed in the context of extinction but not when tested in the context of acquisition, although both contexts were matched with respect to their history of conditioning. These results indicate that both NCL and hippocampus are involved in extinction learning under appetitive conditions or, more specifically, in the consolidation of extinction memory, and that their contribution to extinction is context-specific.

  1. [Biological weapons].

    Science.gov (United States)

    Kerwat, K; Becker, S; Wulf, H; Densow, D

    2010-08-01

    Biological weapons are weapons of mass destruction that use pathogens (bacteria, viruses) or the toxins produced by them to target living organisms or to contaminate non-living substances. In the past, biological warfare has been repeatedly used. Anthrax, plague and smallpox are regarded as the most dangerous biological weapons by various institutions. Nowadays it seems quite unlikely that biological warfare will be employed in any military campaigns. However, the possibility remains that biological weapons may be used in acts of bioterrorism. In addition all diseases caused by biological weapons may also occur naturally or as a result of a laboratory accident. Risk assessment with regard to biological danger often proves to be difficult. In this context, an early identification of a potentially dangerous situation through experts is essential to limit the degree of damage.

  2. Place of great extinctions in the new ecological paradigm

    Directory of Open Access Journals (Sweden)

    О. Я. Кипоренко

    2013-07-01

    Full Text Available The paper demonstrates importance of the knowledge of the causes and consequences of the Great extinctions that occurred before the origin of man, in the formation of a new environmental paradigm. Were described methodological foundations of paleoecological studies. Were analyzed the fossilized remains found directly by the authors on the territory of Ukraine. In the development of new environmental paradigm is necessary to consider knowledge of the great extinction (the knowledge of the past, because it is an event, that can be used not only to study past, as well as predicting the same events in the future

  3. Status and trends of amphibian declines and extinctions worldwide.

    Science.gov (United States)

    Stuart, Simon N; Chanson, Janice S; Cox, Neil A; Young, Bruce E; Rodrigues, Ana S L; Fischman, Debra L; Waller, Robert W

    2004-12-01

    The first global assessment of amphibians provides new context for the well-publicized phenomenon of amphibian declines. Amphibians are more threatened and are declining more rapidly than either birds or mammals. Although many declines are due to habitat loss and overutilization, other, unidentified processes threaten 48% of rapidly declining species and are driving species most quickly to extinction. Declines are nonrandom in terms of species' ecological preferences, geographic ranges, and taxonomic associations and are most prevalent among Neotropical montane, stream-associated species. The lack of conservation remedies for these poorly understood declines means that hundreds of amphibian species now face extinction.

  4. Influence of polarization extinction ratio on distributed polarization coupling detection

    Institute of Scientific and Technical Information of China (English)

    XU Tian-hua; TANG Feng; JING Wen-cai; ZHANG Hong-xia; JIA Da-gong; YU Chang-song; ZHOU Ge; ZHANG Yi-mo

    2008-01-01

    Distributed polarization coupling in polarization-maintaining fibers can be detected by using a white light Michelsonin terferorneter. This technique usually requires that only one polarization mode is excited. However, in practical measurement,the injection polarization direction could not be exactly aligned to one of the principal axes of the PMF, so the influence of the polarization extinction ratio should be considered. Based on the polarization coupling theory, the influence of theincident polarization extinction on the measurement result is evaluated and analyzed, and a method for distributed polarization coupling detection is developed when both two orthogonal eigenmodes are excited.

  5. Extinction dynamics of Lotka-Volterra ecosystems on evolving networks.

    Science.gov (United States)

    Coppex, F; Droz, M; Lipowski, A

    2004-06-01

    We study a model of a multispecies ecosystem described by Lotka-Volterra-like equations. Interactions among species form a network whose evolution is determined by the dynamics of the model. Numerical simulations show power-law distribution of intervals between extinctions, but only for ecosystems with sufficient variability of species and with networks of connectivity above certain threshold that is very close to the percolation threshold of the network. The effect of slow environmental changes on extinction dynamics, degree distribution of the network of interspecies interactions, and some emergent properties of our model are also examined.

  6. Near-infrared extinction with discretised stellar colours

    Science.gov (United States)

    Juvela, M.; Montillaud, J.

    2016-01-01

    Context. Near-infrared (NIR) extinction remains one of the most reliable methods of measuring the column density of dense interstellar clouds. Extinction can be estimated using the reddening of the light of background stars. Several methods exist (e.g., NICE, NICER, NICEST, GNICER) to combine observations of several NIR bands into extinction maps. Aims: We present a new method of estimating extinction based on NIR multiband observations and examine its performance. Methods: Our basic method uses a discretised version of the distribution of intrinsic stellar colours directly. The extinction of individual stars and the average over a resolution element are estimated with Markov chain Monte Carlo (MCMC) methods. Several variations of the basic method are tested, and the results are compared to NICER calculations. Results: In idealised settings or when photometric errors are large, the results of the new method are very close to those of NICER. Clear advantages can be seen when the distribution of intrinsic colours cannot be described well with a single covariance matrix. The MCMC framework makes it easy to consider additional effects such as those of completeness limits and contamination by galaxies or foreground stars. A priori information about relative column density variations at sub-beam scales can result in a significant increase in accuracy. For observations of high photometric precision, the results could be further improved by considering the magnitude dependence of the intrinsic colours. Conclusions: The MCMC computations are time-consuming, but the calculation of large extinction maps is already practical. The same methods can be used with direct optimisation, with significantly less computational work. Faster methods, like NICER, perform very well in many cases even when the basic assumptions no longer hold. The new methods are useful mostly when photometric errors are small, the distribution of intrinsic colours is well known, or one has prior knowledge

  7. Extinction time for the contact process on general graphs

    OpenAIRE

    Schapira, Bruno; Valesin, Daniel

    2015-01-01

    We consider the contact process on finite and connected graphs and study the behavior of the extinction time, that is, the amount of time that it takes for the infection to disappear in the process started from full occupancy. We prove, without any restriction on the graph $G$, that if the infection rate $\\lambda$ is larger than the critical rate of the one-dimensional process, then the extinction time grows faster than $\\exp\\{|G|/(\\log|G|)^\\kappa\\}$ for any constant $\\kappa > 1$, where $|G|$...

  8. HDAC3-selective inhibitor enhances extinction of cocaine-seeking behavior in a persistent manner.

    Science.gov (United States)

    Malvaez, Melissa; McQuown, Susan C; Rogge, George A; Astarabadi, Mariam; Jacques, Vincent; Carreiro, Samantha; Rusche, James R; Wood, Marcelo A

    2013-02-12

    Nonspecific histone deacetylase (HDAC) inhibition has been shown to facilitate the extinction of drug-seeking behavior in a manner resistant to reinstatement. A key open question is which specific HDAC is involved in the extinction of drug-seeking behavior. Using the selective HDAC3 inhibitor RGFP966, we investigated the role of HDAC3 in extinction and found that systemic treatment with RGFP966 facilitates extinction in mice in a manner resistant to reinstatement. We also investigated whether the facilitated extinction is related to the enhancement of extinction consolidation during extinction learning or to negative effects on performance or reconsolidation. These are key distinctions with regard to any compound being used to modulate extinction, because a more rapid decrease in a defined behavior is interpreted as facilitated extinction. Using an innovative combination of behavioral paradigms, we found that a single treatment of RGFP966 enhances extinction of a previously established cocaine-conditioned place preference, while simultaneously enhancing long-term object-location memory within subjects. During extinction consolidation, HDAC3 inhibition promotes a distinct pattern of histone acetylation linked to gene expression within the infralimbic cortex, hippocampus, and nucleus accumbens. Thus, the facilitated extinction of drug-seeking cannot be explained by adverse effects on performance. These results demonstrate that HDAC3 inhibition enhances the memory processes involved in extinction of drug-seeking behavior.

  9. Dynamics and genetics of a disease-driven species decline to near extinction: lessons for conservation

    Science.gov (United States)

    Hudson, M. A.; Young, R. P.; D’Urban Jackson, J.; Orozco-terWengel, P.; Martin, L.; James, A.; Sulton, M.; Garcia, G.; Griffiths, R. A.; Thomas, R.; Magin, C.; Bruford, M. W.; Cunningham, A. A.

    2016-01-01

    Amphibian chytridiomycosis has caused precipitous declines in hundreds of species worldwide. By tracking mountain chicken (Leptodactylus fallax) populations before, during and after the emergence of chytridiomycosis, we quantified the real-time species level impacts of this disease. We report a range-wide species decline amongst the fastest ever recorded, with a loss of over 85% of the population in fewer than 18 months on Dominica and near extinction on Montserrat. Genetic diversity declined in the wild, but emergency measures to establish a captive assurance population captured a representative sample of genetic diversity from Montserrat. If the Convention on Biological Diversity’s targets are to be met, it is important to evaluate the reasons why they appear consistently unattainable. The emergence of chytridiomycosis in the mountain chicken was predictable, but the decline could not be prevented. There is an urgent need to build mitigation capacity where amphibians are at risk from chytridiomycosis. PMID:27485994

  10. A general model of distant hybridization reveals the conditions for extinction in Atlantic salmon and brown trout.

    Science.gov (United States)

    Quilodrán, Claudio S; Currat, Mathias; Montoya-Burgos, Juan I

    2014-01-01

    Interspecific hybridization is common in nature but can be increased in frequency or even originated by human actions, such as species introduction or habitat modification, which may threaten species persistence. When hybridization occurs between distantly related species, referred to as "distant hybridization," the resulting hybrids are generally infertile or fertile but do not undergo chromosomal recombination during gametogenesis. Here, we present a model describing this frequent but poorly studied interspecific hybridization to assess its consequences on parental species and to anticipate the conditions under which they can reach extinction. Our general model fully incorporates three important processes: density-dependent competition, dominance/recessivity inheritance of traits and assortative mating. We demonstrate its use and flexibility by assessing population extinction risk between Atlantic salmon and brown trout in Norway, whose interbreeding has recently increased due to farmed fish releases into the wild. We identified the set of conditions under which hybridization may threaten salmonid species. Thanks to the flexibility of our model, we evaluated the effect of an additional risk factor, a parasitic disease, and showed that the cumulative effects dramatically increase the extinction risk. The consequences of distant hybridization are not genetically, but demographically mediated. Our general model is useful to better comprehend the evolution of such hybrid systems and we demonstrated its importance in the field of conservation biology to set up management recommendations when this increasingly frequent type of hybridization is in action.

  11. Drug-seeking behavior in an invertebrate system: evidence of morphine-induced reward, extinction and reinstatement in crayfish.

    Science.gov (United States)

    Nathaniel, Thomas I; Panksepp, Jaak; Huber, Robert

    2009-02-11

    Several lines of evidence suggest that exploring the neurochemical basis of reward in invertebrate species may provide clues for the fundamental behavioral and neurobiology underpinnings of drug addiction. How the presence of drug-sensitive reward relates to a decrease in drug-seeking behavior and reinstatement of drug-seeking behavior in invertebrate systems is not known. The present study of a conditioned place preference (CPP) paradigm in crayfish (Orconectes rusticus) explores morphine-induced reward, extinction and reinstatement. Repeated intra-circulatory infusions of 2.5 microg/g, 5.0 microg/g and 10.0 microg/g doses of morphine over 5 days serve as a reward when paired with a distinct visual or tactile environment. Morphine-induced CPP was extinguished after repeated saline injections for 5 days in the previously morphine-paired compartment. After the previously established CPP had been eliminated during the extinction phase, morphine-experienced crayfish were challenged with 2.5 microg/g, 5.0 microg/g and 10.0 microg/g, respectively. The priming injections of morphine reinstated CPP in all training doses, suggesting that morphine-induced CPP is unrelenting, and that with time, it can be reinstated by morphine following extinction in an invertebrate model just like in mammals. Together with other recent studies, this work demonstrates the advantage of using crayfish as an invertebrate animal model to investigate the basic biological processes that underline exposure to mammalian drugs of abuse.

  12. A general model of distant hybridization reveals the conditions for extinction in Atlantic salmon and brown trout.

    Directory of Open Access Journals (Sweden)

    Claudio S Quilodrán

    Full Text Available Interspecific hybridization is common in nature but can be increased in frequency or even originated by human actions, such as species introduction or habitat modification, which may threaten species persistence. When hybridization occurs between distantly related species, referred to as "distant hybridization," the resulting hybrids are generally infertile or fertile but do not undergo chromosomal recombination during gametogenesis. Here, we present a model describing this frequent but poorly studied interspecific hybridization to assess its consequences on parental species and to anticipate the conditions under which they can reach extinction. Our general model fully incorporates three important processes: density-dependent competition, dominance/recessivity inheritance of traits and assortative mating. We demonstrate its use and flexibility by assessing population extinction risk between Atlantic salmon and brown trout in Norway, whose interbreeding has recently increased due to farmed fish releases into the wild. We identified the set of conditions under which hybridization may threaten salmonid species. Thanks to the flexibility of our model, we evaluated the effect of an additional risk factor, a parasitic disease, and showed that the cumulative effects dramatically increase the extinction risk. The consequences of distant hybridization are not genetically, but demographically mediated. Our general model is useful to better comprehend the evolution of such hybrid systems and we demonstrated its importance in the field of conservation biology to set up management recommendations when this increasingly frequent type of hybridization is in action.

  13. Interference patterns and extinction ratio of the diatom Coscinodiscus granii

    DEFF Research Database (Denmark)

    Maibohm, Christian; Friis, Søren Michael Mørk; Ellegaard, M.;

    2015-01-01

    We report experimental and theoretical verification of the nature and position of multiple interference points of visible light transmitted through the valve of the centric diatom species Coscinodiscus granii. Furthermore, by coupling the transmitted light into an optical fiber and moving...... the diatom valve between constructive and destructive interference points, an extinction ratio of 20 dB is shown...

  14. Larger brain size indirectly increases vulnerability to extinction in mammals.

    Science.gov (United States)

    Gonzalez-Voyer, Alejandro; González-Suárez, Manuela; Vilà, Carles; Revilla, Eloy

    2016-06-01

    Although previous studies have addressed the question of why large brains evolved, we have limited understanding of potential beneficial or detrimental effects of enlarged brain size in the face of current threats. Using novel phylogenetic path analysis, we evaluated how brain size directly and indirectly, via its effects on life history and ecology, influences vulnerability to extinction across 474 mammalian species. We found that larger brains, controlling for body size, indirectly increase vulnerability to extinction by extending the gestation period, increasing weaning age, and limiting litter sizes. However, we found no evidence of direct, beneficial, or detrimental effects of brain size on vulnerability to extinction, even when we explicitly considered the different types of threats that lead to vulnerability. Order-specific analyses revealed qualitatively similar patterns for Carnivora and Artiodactyla. Interestingly, for Primates, we found that larger brain size was directly (and indirectly) associated with increased vulnerability to extinction. Our results indicate that under current conditions, the constraints on life history imposed by large brains outweigh the potential benefits, undermining the resilience of the studied mammals. Contrary to the selective forces that have favored increased brain size throughout evolutionary history, at present, larger brains have become a burden for mammals.

  15. Plant evolution: pulses of extinction and speciation in gymnosperm diversity.

    Science.gov (United States)

    Davis, Charles C; Schaefer, Hanno

    2011-12-20

    Living gymnosperms represent the survivors of ancient seed plant lineages whose fossil record reaches back 270 million years. Two recent studies find that recent pulses of extinction and speciation have shaped today's gymnosperm diversity, contradicting the widespread assumption that gymnosperms have remained largely unchanged for tens of millions of years.

  16. Three-Component Dust Models for Interstellar Extinction

    Indian Academy of Sciences (India)

    C. Muthumariappan

    2010-03-01

    Interstellar extinction curves obtained from the ‘extinction without standard’ method were used to constrain the dust characteristics in the mean ISM (V = 3.1), along the lines of sight through a high latitude diffuse molecular cloud towards HD 210121 (V = 2.1) and in a dense interstellar environment towards the cluster NGC 1977 (V = 6.42). We have used three-component dust models comprising silicate, graphite and very small carbonaceous grains (polycyclic aromatic hydrocarbons) following the grain size distributions introduced by Li & Draine in 2001. It is shown that oxygen, carbon and silicon abundances derived from our models are closer with the available elemental abundances for the dust grains in the ISM if F & G type stars atmospheric abundances are taken for the ISM than the solar. The importance of very small grains in modelling the variation of interstellar extinction curves has been investigated. Grain size distributions and elemental abundances locked up in dust are studied and compared at different interstellar environments using these three extinction curves. We present the albedo and the scattering asymmetry parameter evaluated from optical to extreme-UV wavelengths for the proposed dust models.

  17. Melanoidins extinction coefficient in the glucose/glycine Maillard reaction

    NARCIS (Netherlands)

    Martins, S.I.F.S.; Boekel, van M.A.J.S.

    2003-01-01

    Melanoidins (brown, nitrogenous polymers and co-polymers) are the final products of the Maillard reaction. The glucose/glycine melanoidins extinction coefficient was determined using C-14-labelled glucose at three different reaction conditions. The absorbance was measured at different wavelengths (4

  18. EXTINCTION OF A DISCRETE NONLINEAR PREDATOR-PREY SYSTEM

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    In this paper, we consider a discrete nonlinear predator-prey model with nonnegative coefficients bounded above and below by positive constants. We show that under some suitable assumptions the predator species is driven to extinction and the prey species x is globally attractive with any positive solution to a discrete Logistic equation.

  19. Dust evolution processes constrained by extinction curves in nearby galaxies

    CERN Document Server

    Hou, Kuan-Chou; Michałowski, Michał J

    2016-01-01

    Extinction curves, especially those in the Milky Way (MW), the Large Magellanic Cloud (LMC), and the Small Magellanic Cloud (SMC), have provided us with a clue to the dust properties in the nearby Universe. We examine whether or not these extinction curves can be explained by well known dust evolution processes. We treat the dust production in stellar ejecta, destruction in supernova shocks, dust growth by accretion and coagulation, and dust disruption by shattering. To make a survey of the large parameter space possible, we simplify the treatment of the grain size distribution evolution by adopting the `two-size approximation', in which we divide the grain population into small ($\\lesssim 0.03~\\mu$m) and large ($\\gtrsim 0.03~\\mu$m) grains. It is confirmed that the MW extinction curve can be reproduced in reasonable ranges for the time-scale of the above processes with a silicate-graphite mixture. This indicates that the MW extinction curve is a natural consequence of the dust evolution through the above proc...

  20. Recent extinctions disturb path to equilibrium diversity in Caribbean bats

    NARCIS (Netherlands)

    Valente, Luis; Etienne, Rampal S.; Davalos, Liliana M.

    2017-01-01

    Islands are ideal systems to model temporal changes in biodiversity and reveal the influence of humans on natural communities. Although theory predicts biodiversity on islands tends towards an equilibrium value, the recent extinction of large proportions of island biotas complicates testing this mod

  1. Analysis of coprolites from the extinct mountain goat Myotragus balearicus

    NARCIS (Netherlands)

    Welker, Frido; Duijm, Elza; Gaag, Kristiaan J. van der; Geel, Bas van; Knijff, Peter de; Leeuwen, Jacqueline van; Mol, Dick; Plicht, Johannes van der; Raes, Niels; Reumer, Jelle; Gravendeel, Barbara

    2014-01-01

    Humans colonized the Balearic Islands 5–4 ka ago. They arrived in a uniquely adapted ecosystem with the Balearic mountain goat Myotragus balearicus (Bovidae, Antilopinae, Caprini) as the only large mammal. This mammal went extinct rapidly after human arrival. Several hypotheses have been proposed to

  2. Analysis of coprolites from the extinct mountain goat Myotragus balearicus

    NARCIS (Netherlands)

    F. Welker; E. Duijm; K.J. van der Gaag; B. van Geel; P. de Knijff; J. van Leeuwen; D. Mol; J. van der Plicht; N. Raes; J Reumer; B. Gravendeel

    2014-01-01

    Humans colonized the Balearic Islands 5-4 ka ago. They arrived in a uniquely adapted ecosystem with the Balearic mountain goat Myotragus balearicus (Bovidae, Antilopinae, Caprini) as the only large mammal. This mammal went extinct rapidly after human arrival. Several hypotheses have been proposed to

  3. Analysis of coprolites from the extinct mountain goat Myotragus balearicus

    NARCIS (Netherlands)

    Welker, F.; Duijm, E.; van der Gaag, K.J.; de Knijff, P.; van Leeuwen, J.; Mol, D.; van der Plicht, J.; Raes, N.; Reumer, J.; Gravendeel, B.

    2014-01-01

    Humans colonized the Balearic Islands 5-4. ka ago. They arrived in a uniquely adapted ecosystem with the Balearic mountain goat Myotragus balearicus (Bovidae, Antilopinae, Caprini) as the only large mammal. This mammal went extinct rapidly after human arrival. Several hypotheses have been proposed t

  4. Ecological predictors of extinction risks of endemic mammals of China.

    Science.gov (United States)

    Chen, You-Hua

    2014-07-01

    In this brief report, we analyzed ecological correlates of risk of extinction for mammals endemic to China using phylogenetic eigenvector methods to control for the effect of phylogenetic inertia. Extinction risks were based on the International Union for Conservation of Nature (IUCN) Red List and ecological explanatory attributes that include range size and climatic variables. When the effect of phylogenetic inertia were controlled, climate became the best predictor for quantifying and evaluating extinction risks of endemic mammals in China, accounting for 13% of the total variation. Range size seems to play a trivial role, explaining ~1% of total variation; however, when non-phylogenetic variation partitioning analysis was done, the role of range size then explained 7.4% of total variation. Consequently, phylogenetic inertia plays a substantial role in increasing the explanatory power of range size on the extinction risks of mammals endemic to China. Limitations of the present study are discussed, with a focus on under-represented sampling of endemic mammalian species.

  5. Altered primary production during mass-extinction events

    NARCIS (Netherlands)

    van de Schootbrugge, B.; Gollner, S.

    2013-01-01

    The Big Five mass-extinction events are characterized by dramatic changes in primary producers. Initial disturbance to primary producers is usually followed by a succession of pioneers that represent qualitative and quantitative changes in standing crops of land plants and/or phytoplankton. On land,

  6. Oceanic Anoxia and the End Permian Mass Extinction

    Science.gov (United States)

    Wignall; Twitchett

    1996-05-24

    Data on rocks from Spitsbergen and the equatorial sections of Italy and Slovenia indicate that the world's oceans became anoxic at both low and high paleolatitudes in the Late Permian. Such conditions may have been responsible for the mass extinction at this time. This event affected a wide range of shelf depths and extended into shallow water well above the storm wave base.

  7. Gas absorption and dust extinction towards the Orion Nebula Cluster

    CERN Document Server

    Hasenberger, Birgit; Alves, Joao; Wolk, Scott; Meingast, Stefan; Getman, Konstantin; Pillitteri, Ignazio

    2016-01-01

    We characterise the relation between the gas and dust content of the interstellar medium towards young stellar objects in the Orion Nebula Cluster. X-ray observations provide estimates of the absorbing equivalent hydrogen column density N_H based on spectral fits. Near-infrared extinction values are calculated from intrinsic and observed colour magnitudes (J-H) and (H-K_s) as given by the VISTA Orion A survey. A linear fit of the correlation between column density and extinction values A_V yields an estimate of the N_H/A_V ratio. We investigate systematic uncertainties of the results by describing and (if possible) quantifying the influence of circumstellar material and the adopted extinction law, X-ray models, and elemental abundances on the N_H/A_V ratio. Assuming a Galactic extinction law with R_V=3.1 and solar abundances by Anders & Grevesse (1989), we deduce an N_H/A_V ratio of (1.39 +- 0.14) x 10^21 cm^-2 mag^-1 for Class III sources in the Orion Nebula Cluster where the given error does not include...

  8. Determinants of Instrumental Extinction in Terrestrial Toads ("Bufo arenarum")

    Science.gov (United States)

    Muzio, Ruben N.; Ruetti, Eliana; Papini, Mauricio R.

    2006-01-01

    Previous research in a water-reinforced instrumental training situation with toads ("Bufo arenarum") has shown that performance in both acquisition and extinction is poorer after partial, rather than continuous reinforcement training. In Experiment 1, the performance of a group receiving 24 trials on a 50% partial reinforcement schedule was poorer…

  9. The biogeography and extinction of megapodes in Oceania

    NARCIS (Netherlands)

    Steadman, D.W.

    1999-01-01

    The arrival of prehistoric peoples in Oceania over the past several millennia resulted in the extinction of many species and populations of megapodes. Before these anthropogenic losses, species of megapodes ranged across Melanesia, Western Polynesia, and much of Micronesia. Island groups that lack m

  10. Extinction and the associative structure of heterogeneous instrumental chains.

    Science.gov (United States)

    Thrailkill, Eric A; Bouton, Mark E

    2016-09-01

    Drug abuse, overeating, and smoking are all examples of instrumental behaviors that often involve chains or sequences of behavior. A behavior chain is minimally composed of a procurement response that is required in order for a subsequent consumption response to be reinforced. Despite the translational importance of behavior chains, few studies have attempted to understand what binds them together and takes them apart. This article surveys the development of the heterogeneous instrumental chain method and introduces recent findings that have used extinction to analyze the associative content of (what is learned in) the chain. Chained responses that are occasion-set by their own discriminative stimuli may be directly associated; extinction of the procurement response weakens its associated consumption response, and extinction of the consumption response weakens its associated procurement response. Extinction itself involves learning to inhibit the response. Extinguished chained responses are subject to renewal when they are tested either back in the acquisition context or in a new context. In addition, a consumption response that is extinguished outside its chain is renewed when returned to the context of the preceding response in the chain. Research on heterogeneous behavior chains can provide important insights into an important but often overlooked aspect of instrumental learning.

  11. Extinction and Scattering of Light by Magnetic Colloidal Nanoparticles

    Directory of Open Access Journals (Sweden)

    C.V. Yerin

    2015-12-01

    Full Text Available The peculiarities of scattering and extinction of light by colloids with different concentrations of magnetite nanoparticles are investigated. The light absorption effect on spectral dependencies of optical density of magnetic colloid are observed. According to dynamic light scattering experiments, particle size distributions for samples with different concentration of nanoparticles are defined.

  12. Survival of the Partial Reinforcement Extinction Effect after Contextual Shifts

    Science.gov (United States)

    Boughner, Robert L.; Papini, Mauricio R.

    2006-01-01

    The effects of contextual shifts on the partial reinforcement extinction effect (PREE) were studied in autoshaping with rats. Experiment 1 established that the two contexts used subsequently were easily discriminable and equally salient. In Experiment 2, independent groups of rats received acquisition training under partial reinforcement (PRF) or…

  13. Extinction learning, reconsolidation and the internal reinforcement hypothesis.

    Science.gov (United States)

    Eisenhardt, Dorothea; Menzel, Randolf

    2007-02-01

    Retrieving a consolidated memory--by exposing an animal to the learned stimulus but not to the associated reinforcement--leads to two opposing processes: one that weakens the old memory as a result of extinction learning, and another that strengthens the old, already-consolidated memory as a result of some less well-understood form of learning. This latter process of memory strengthening is often referred to as "reconsolidation", since protein synthesis can inhibit this form of memory formation. Although the behavioral phenomena of the two antagonizing forms of learning are well documented, the mechanisms behind the corresponding processes of memory formation are still quite controversial. Referring to results of extinction/reconsolidation experiments in honeybees, we argue that two opposing learning processes--with their respective consolidation phases and memories--are initiated by retrieval trials: extinction learning and reminder learning, the latter leading to the phenomenon of spontaneous recovery from extinction, a process that can be blocked with protein synthesis inhibition.

  14. Infant Contingency/Extinction Performance after Observing Partial Reinforcement

    Science.gov (United States)

    Weir, Catherine; Toland, Cynthia; King, Rose Ann; Martin, Lisa Maas

    2005-01-01

    Social information gathering by infants 6 and 12 months old was examined as a foundation for later social learning that may be uniquely human. Infant performance on a contingency/extinction task was studied following a caregiver demonstration of the contingency on varied reinforcement schedules. Infants who observed caregivers receive any…

  15. Reintroduction of locally extinct vertebrates impacts arid soil fungal communities.

    Science.gov (United States)

    Clarke, Laurence J; Weyrich, Laura S; Cooper, Alan

    2015-06-01

    Introduced species have contributed to extinction of native vertebrates in many parts of the world. Changes to vertebrate assemblages are also likely to alter microbial communities through coextinction of some taxa and the introduction of others. Many attempts to restore degraded habitats involve removal of exotic vertebrates (livestock and feral animals) and reintroduction of locally extinct species, but the impact of such reintroductions on microbial communities is largely unknown. We used high-throughput DNA sequencing of the fungal internal transcribed spacer I (ITS1) region to examine whether replacing exotic vertebrates with reintroduced native vertebrates led to changes in soil fungal communities at a reserve in arid central Australia. Soil fungal diversity was significantly different between dune and swale (interdune) habitats. Fungal communities also differed significantly between sites with exotic or reintroduced native vertebrates after controlling for the effect of habitat. Several fungal operational taxonomic units (OTUs) found exclusively inside the reserve were present in scats from reintroduced native vertebrates, providing a direct link between the vertebrate assemblage and soil microbial communities. Our results show that changes to vertebrate assemblages through local extinctions and the invasion of exotic species can alter soil fungal communities. If local extinction of one or several species results in the coextinction of microbial taxa, the full complement of ecological interactions may never be restored.

  16. Atmospheric Carbon Injection Linked to End-Triassic Mass Extinction

    NARCIS (Netherlands)

    Ruhl, M.; Bonis, N.R.; Reichart, G.J.; Sinninghe Damsté, J.S.; Kürschner, W.M.

    2011-01-01

    The end-Triassic mass extinction (similar to 201.4 million years ago), marked by terrestrial ecosystem turnover and up to similar to 50% loss in marine biodiversity, has been attributed to intensified volcanic activity during the break-up of Pangaea. Here, we present compound-specific carbon-isotope

  17. A new chronology for the end-Triassic mass extinction

    Science.gov (United States)

    Deenen, M. H. L.; Ruhl, M.; Bonis, N. R.; Krijgsman, W.; Kuerschner, W. M.; Reitsma, M.; van Bergen, M. J.

    2010-03-01

    The transition from the Triassic to Jurassic Period, initiating the 'Age of the dinosaurs', approximately 200 Ma, is marked by a profound mass extinction with more than 50% genus loss in both marine and continental realms. This event closely coincides with a period of extensive volcanism in the Central Atlantic Magmatic Province (CAMP) associated with the initial break-up of Pangaea but a causal relationship is still debated. The Triassic-Jurassic (T-J) boundary is recently proposed in the marine record at the first occurrence datum of Jurassic ammonites, post-dating the extinction interval that concurs with two distinct perturbations in the carbon isotope record. The continental record shows a major palynological turnover together with a prominent change in tetrapod taxa, but a direct link to the marine events is still equivocal. Here we develop an accurate chronostratigraphic framework for the T-J boundary interval and establish detailed trans-Atlantic and marine-continental correlations by integrating astrochronology, paleomagnetism, basalt geochemistry and geobiology. We show that the oldest CAMP basalts are diachronous by 20 kyr across the Atlantic Ocean, and that these two volcanic pulses coincide with the end-Triassic extinction interval in the marine realm. Our results support the hypotheses of Phanerozoic mass extinctions resulting from emplacement of Large Igneous Provinces (LIPs) and provide crucial time constraints for numerical modelling of Triassic-Jurassic climate change and global carbon-cycle perturbations.

  18. The Exclusive Induction of Extinction Is Gated by BDNF

    Science.gov (United States)

    Kirtley, Anne; Thomas, Kerrie L.

    2010-01-01

    We have previously reported that the reconsolidation and extinction of hippocampal-dependent contextual fear memory can be initiated by a single context conditioned stimulus (CS) presentation of either short or long duration, and that both processes require protein synthesis in this brain region. Furthermore, reconsolidation depends on Zif268…

  19. AEGIS: Extinction and Star Formation Tracers from Line Emission

    CERN Document Server

    Weiner, B J; Bundy, K; Conselice, C J; Cooper, M C; Ellis, Richard S; Ivison, R J; Noeske, K G; Phillips, A C; Yan, R; Weiner, Benjamin J.; Papovich, Casey; Yan, Renbin

    2006-01-01

    Strong nebular emission lines are a sensitive probe of star formation and extinction in galaxies, and the [O II] line detects star forming populations out to z>1. However, star formation rates from emission lines depend on calibration of extinction and the [O II]/H-alpha line ratio, and separating star formation from AGN emission. We use calibrated line luminosities from the DEEP2 survey and Palomar K magnitudes to show that the behavior of emission line ratios depends on galaxy magnitude and color. For galaxies on the blue side of the color bimodality, the vast majority show emission signatures of star formation, and there are strong correlations of extinction and [O II]/H-alpha with restframe H magnitude. The conversion of [O II] to extinction-corrected H-alpha and thus to star formation rate has a significant slope with M_H, 0.23 dex/mag. Red galaxies with emission lines have a much higher scatter in their line ratios, and more than half show AGN signatures. We use 24 micron fluxes from Spitzer/MIPS to dem...

  20. An Investigation of Differential Reinforcement of Alternative Behavior without Extinction

    Science.gov (United States)

    Athens, Elizabeth S.; Vollmer, Timothy R.

    2010-01-01

    We manipulated relative reinforcement for problem behavior and appropriate behavior using differential reinforcement of alternative behavior (DRA) without an extinction component. Seven children with developmental disabilities participated. We manipulated duration (Experiment 1), quality (Experiment 2), delay (Experiment 3), or a combination of…

  1. Functional Communication Training with and without Extinction and Punishment.

    Science.gov (United States)

    Fisher, Wayne; And Others

    1993-01-01

    In this study, functional communication training alone and combined with extinction and/or punishment was evaluated for four clients with severe retardation, behavior problems, and communication deficits. Results showed that the combination of training plus punishment produced the largest and most consistent reductions in target behavior problems.…

  2. Influence of the Gould Belt on Interstellar Extinction

    CERN Document Server

    Gontcharov, George

    2016-01-01

    A new analytical 3D model of interstellar extinction within 500 pc of the Sun as a function of the Galactic spherical coordinates is suggested. This model is physically more justified than the widely used Arenou model, since it takes into account the presence of absorbing matter both in the layer along the equatorial Galactic plane and in the Gould Belt. The extinction in the equatorial layer varies as the sine of the Galactic longitude and in the Gould Belt as the sine of twice the longitude in the Belt plane. The extinction across the layers varies according to a barometric law. It has been found that the absorbing layers intersect at an angle of 17 deg and that the Sun is located near the axial plane of the absorbing layer of the Gould Belt and is probably several parsecs below the axial plane of the equatorial absorbing layer but above the Galactic plane. The model has been tested using the extinction of real stars from three catalogs.

  3. Variations of the Interstellar Extinction Law within the Nearest Kiloparsec

    CERN Document Server

    Gontcharov, George

    2016-01-01

    Multicolor photometry from the Tycho-2 and 2MASS catalogues for 11 990 OB and 30 671 K-type red giant branch stars is used to detect systematic large-scale variations of the interstellar extinction law within the nearest kiloparsec. The characteristic of the extinction law, the total-to-selective extinction ratio $R_V$, which also characterizes the size and other properties of interstellar dust grains, has been calculated for various regions of space by the extinction law extrapolation method. The results for the two classes of stars agree: the standard deviation of the "red giants minus OB" $R_V$ differences within 500 pc of the Sun is 0.2. The detected $R_V$ variations between 2.2 and 4.4 not only manifest themselves in individual clouds but also span the entire space near the Sun, following Galactic structures. In the Local Bubble within about 100 pc of the Sun, $R_V$ has a minimum. In the inner part of the Gould Belt and at high Galactic latitudes, at a distance of about 150 pc from the Sun, $R_V$ reaches...

  4. Robustness against extinction by stochastic sex determination in small populations

    Science.gov (United States)

    Schneider, David M.; do Carmo, Eduardo; Bar-Yam, Yaneer; de Aguiar, Marcus A. M.

    2012-10-01

    Sexually reproducing populations with a small number of individuals may go extinct by stochastic fluctuations in sex determination, causing all their members to become male or female in a generation. In this work we calculate the time to extinction of isolated populations with fixed number N of individuals that are updated according to the Moran birth and death process. At each time step, one individual is randomly selected and replaced by its offspring resulting from mating with another individual of the opposite sex; the offspring can be male or female with equal probability. A set of N time steps is called a generation, the average time it takes for the entire population to be replaced. The number k of females fluctuates in time, similarly to a random walk, and extinction, which is the only asymptotic possibility, occurs when k=0 or k=N. We show that it takes only one generation for an arbitrary initial distribution of males and females to approach the binomial distribution. This distribution, however, is unstable and the population eventually goes extinct in 2N/N generations. We also discuss the robustness of these results against bias in the determination of the sex of the offspring, a characteristic promoted by infection by the bacteria Wolbachia in some arthropod species or by temperature in reptiles.

  5. Postretrieval Extinction in Adolescence Prevents Return of Juvenile Fear

    Science.gov (United States)

    Jones, Carolyn E.; Monfils, Marie-H.

    2016-01-01

    Traumatic experiences early in life can contribute to the development of mood and anxiety disorders that manifest during adolescence and young adulthood. In young rats exposed to acute fear or stress, alterations in neural development can lead to enduring behavioral abnormalities. Here, we used a modified extinction intervention…

  6. Extinction Partially Reverts Structural Changes Associated with Remote Fear Memory

    Science.gov (United States)

    Vetere, Gisella; Restivo, Leonardo; Novembre, Giovanni; Aceti, Massimiliano; Lumaca, Massimo; Ammassari-Teule, Martine

    2011-01-01

    Structural synaptic changes occur in medial prefrontal cortex circuits during remote memory formation. Whether extinction reverts or further reshapes these circuits is, however, unknown. Here we show that the number and the size of spines were enhanced in anterior cingulate (aCC) and infralimbic (ILC) cortices 36 d following contextual fear…

  7. Scattering and extinction from high-aspect-ratio trenches

    DEFF Research Database (Denmark)

    Roberts, Alexander Sylvester; Søndergaard, Thomas; Chirumamilla, Manohar;

    2015-01-01

    We construct a semi-analytical model describing the scattering, extinction and absorption properties of a high aspect-ratio trench in a metallic film. We find that these trenches act as highly efficient scatterers of free waves. In the perfect conductor limit, which for many metals is approached...

  8. Interference patterns and extinction ratio of the diatom Coscinodiscus granii

    DEFF Research Database (Denmark)

    Maibohm, Christian; Friis, Søren Michael Mørk; Ellegaard, M.;

    2015-01-01

    We report experimental and theoretical verification of the nature and position of multiple interference points of visible light transmitted through the valve of the centric diatom species Coscinodiscus granii. Furthermore, by coupling the transmitted light into an optical fiber and moving the dia...... the diatom valve between constructive and destructive interference points, an extinction ratio of 20 dB is shown...

  9. Outbreak and Extinction Dynamics in a Stochastic Ebola Model

    Science.gov (United States)

    Nieddu, Garrett; Bianco, Simone; Billings, Lora; Forgoston, Eric; Kaufman, James

    A zoonotic disease is a disease that can be passed between animals and humans. In many cases zoonotic diseases can persist in the animal population even if there are no infections in the human population. In this case we call the infected animal population the reservoir for the disease. Ebola virus disease (EVD) and SARS are both notable examples of such diseases. There is little work devoted to understanding stochastic disease extinction and reintroduction in the presence of a reservoir. Here we build a stochastic model for EVD and explicitly consider the presence of an animal reservoir. Using a master equation approach and a WKB ansatz, we determine the associated Hamiltonian of the system. Hamilton's equations are then used to numerically compute the 12-dimensional optimal path to extinction, which is then used to estimate mean extinction times. We also numerically investigate the behavior of the model for dynamic population size. Our results provide an improved understanding of outbreak and extinction dynamics in diseases like EVD.

  10. The Formation and Extinction of Fear Memory in Tree Shrews

    Directory of Open Access Journals (Sweden)

    Shujiang eShang

    2015-07-01

    Full Text Available Fear is an emotion that is well studied due to its importance for animal survival. Experimental animals, such as rats and mice, have been widely used to model fear. However, higher animals such as nonhuman primates have rarely been used to study fear due to ethical issues and high costs. Tree shrews are small mammals that are closely related to primates; they have been used to model human-related psychosocial conditions such as stress and alcohol tolerance. Here, we describe an experimental paradigm to study the formation and extinction of fear memory in tree shrews. We designed an experimental apparatus of a light/dark box with a voltage foot shock. We found that tree shrews preferred staying in the dark box in the daytime without stimulation and showed avoidance to voltage shocks applied to the footplate in a voltage-dependent manner. Foot shocks applied to the dark box for 5 days (10 minutes per day effectively reversed the light–dark preference of the tree shrews, and this memory lasted for more than 50 days without any sign of memory decay (extinction in the absence of further stimulation. However, this fear memory was reversed with 4 days of reverse training by applying the same stimulus to the light box. When reducing the stimulus intensity during the training period, a memory extinction and subsequently reinstatement effects were observed. Thus, our results describe an efficient method of monitoring fear memory formation and extinction in tree shrews.

  11. The formation and extinction of fear memory in tree shrews.

    Science.gov (United States)

    Shang, Shujiang; Wang, Cong; Guo, Chengbing; Huang, Xu; Wang, Liecheng; Zhang, Chen

    2015-01-01

    Fear is an emotion that is well-studied due to its importance for animal survival. Experimental animals, such as rats and mice, have been widely used to model fear. However, higher animals such as nonhuman primates have rarely been used to study fear due to ethical issues and high costs. Tree shrews are small mammals that are closely related to primates; they have been used to model human-related psychosocial conditions such as stress and alcohol tolerance. Here, we describe an experimental paradigm to study the formation and extinction of fear memory in tree shrews. We designed an experimental apparatus of a light/dark box with a voltage foot shock. We found that tree shrews preferred staying in the dark box in the daytime without stimulation and showed avoidance to voltage shocks applied to the footplate in a voltage-dependent manner. Foot shocks applied to the dark box for 5 days (10 min per day) effectively reversed the light-dark preference of the tree shrews, and this memory lasted for more than 50 days without any sign of memory decay (extinction) in the absence of further stimulation. However, this fear memory was reversed with 4 days of reverse training by applying the same stimulus to the light box. When reducing the stimulus intensity during the training period, a memory extinction and subsequently reinstatement effects were observed. Thus, our results describe an efficient method of monitoring fear memory formation and extinction in tree shrews.

  12. Hierarchical spatial structure of stream fish colonization and extinction

    Science.gov (United States)

    Hitt, N.P.; Roberts, J.H.

    2012-01-01

    Spatial variation in extinction and colonization is expected to influence community composition over time. In stream fish communities, local species richness (alpha diversity) and species turnover (beta diversity) are thought to be regulated by high extinction rates in headwater streams and high colonization rates in downstream areas. We evaluated the spatiotemporal structure of fish communities in streams originally surveyed by Burton and Odum 1945 (Ecology 26: 182-194) in Virginia, USA and explored the effects of species traits on extinction and colonization dynamics. We documented dramatic changes in fish community structure at both the site and stream scales. Of the 34 fish species observed, 20 (59%) were present in both time periods, but 11 (32%) colonized the study area and three (9%) were extirpated over time. Within streams, alpha diversity increased in two of three streams but beta diversity decreased dramatically in all streams due to fish community homogenization caused by colonization of common species and extirpation of rare species. Among streams, however, fish communities differentiated over time. Regression trees indicated that reproductive life-history traits such as spawning mound construction, associations with mound-building species, and high fecundity were important predictors of species persistence or colonization. Conversely, native fishes not associated with mound-building exhibited the highest rates of extirpation from streams. Our results demonstrate that stream fish colonization and extinction dynamics exhibit hierarchical spatial structure and suggest that mound-building fishes serve as keystone species for colonization of headwater streams.

  13. AN INVESTIGATION OF DIFFERENTIAL REINFORCEMENT OF ALTERNATIVE BEHAVIOR WITHOUT EXTINCTION

    OpenAIRE

    Athens, Elizabeth S; Vollmer, Timothy R

    2010-01-01

    We manipulated relative reinforcement for problem behavior and appropriate behavior using differential reinforcement of alternative behavior (DRA) without an extinction component. Seven children with developmental disabilities participated. We manipulated duration (Experiment 1), quality (Experiment 2), delay (Experiment 3), or a combination of each (Experiment 4), such that reinforcement favored appropriate behavior rather than problem behavior even though problem behavior still produced rei...

  14. Ca, Sr, Mo and U isotopes evidence ocean acidification and deoxygenation during the Late Permian mass extinction

    Science.gov (United States)

    Silva-Tamayo, Juan Carlos; Payne, Jon; Wignall, Paul; Newton, Rob; Eisenhauer, Anton; Weyer, Stenfan; Neubert, Nadja; Lau, Kim; Maher, Kate; Paytan, Adina; Lehrmann, Dan; Altiner, Demir; Yu, Meiyi

    2014-05-01

    The most catastrophic extinction event in the history of animal life occurred at the end of the Permian Period, ca. 252 Mya. Ocean acidification and global oceanic euxinia have each been proposed as causes of this biotic crisis, but the magnitude and timing of change in global ocean chemistry remains poorly constrained. Here we use multiple isotope systems - Ca, Sr, Mo and U - measured from well dated Upper Permian- Lower Triassic sedimentary sections to better constrain the magnitude and timing of change in ocean chemistry and the effects of ocean acidification and de-oxygenation through this interval. All the investigated carbonate successions (Turkey, Italy and China) exhibit decreasing δ44/40Ca compositions, from ~-1.4‰ to -2.0‰ in the interval preceding the main extinction. These values remain low during most of the Griesbachian, to finally return to -1.4‰ in the middle Dienerian. The limestone succession from southern Turkey also displays a major decrease in the δ88/86Sr values from 0.45‰ to 0.3‰ before the extinction. These values remain low during the Griesbachian and finally increase to 0.55‰ by the middle Dienerian. The paired negative anomalies on the carbonate δ44/40Ca and δ88/86Sr suggest a decrease in the carbonate precipitation and thus an episode of ocean acidification coincident with the major biotic crisis. The Mo and U isotope records also exhibit significant rapid negative anomalies at the onset of the main extinction interval, suggesting rapid expansion of anoxic and euxinic marine bottom waters during the extinction interval. The rapidity of the isotope excursions in Mo and U suggests substantially reduced residence times of these elements in seawater relative to the modern, consistent with expectations for a time of widespread anoxia. The large C-isotope variability within Lower Triassic rocks, which is similar to that of the Lower-Middle Cambrian, may reflect biologically controlled perturbations of the oceanic carbon cycle

  15. Evolutionary biology of harvestmen (Arachnida, Opiliones).

    Science.gov (United States)

    Giribet, Gonzalo; Sharma, Prashant P

    2015-01-07

    Opiliones are one of the largest arachnid orders, with more than 6,500 species in 50 families. Many of these families have been erected or reorganized in the last few years since the publication of The Biology of Opiliones. Recent years have also seen an explosion in phylogenetic work on Opiliones, as well as in studies using Opiliones as test cases to address biogeographic and evolutionary questions more broadly. Accelerated activity in the study of Opiliones evolution has been facilitated by the discovery of several key fossils, including the oldest known Opiliones fossil, which represents a new, extinct suborder. Study of the group's biology has also benefited from rapid accrual of genomic resources, particularly with respect to transcriptomes and functional genetic tools. The rapid emergence and utility of Phalangium opilio as a model for evolutionary developmental biology of arthropods serve as demonstrative evidence of a new area of study in Opiliones biology, made possible through transcriptomic data.

  16. Quantification of extinction mechanism in counterflow premixed flames

    KAUST Repository

    Choi, Sangkyu

    2014-09-01

    The extinction mechanisms of stretched premixed flames have been investigated numerically for the fuels of CH4, C3H8, H2, CO and for the mixture fuels of CH4+H2 and CO+H2 by adopting symmetric double premixed flames in a counterflow configuration. The local equilibrium temperature concept was used as a measure of energy loss or gain in order to quantify the extinction mechanism by preferential diffusion and/or incomplete reaction. The energy loss ratio from preferential diffusion arising from non-unity Lewis number and the loss ratio from incomplete reaction were calculated at various equivalence ratios near flame extinction. The results showed that the extinction of lean H2, CH4, CH4+H2, CO+H2, and rich C3H8 premixed flames was caused by incomplete reaction due to insufficient reaction time, indicating that the effective Lewis number was smaller than unity, while the effect of preferential diffusion resulted in energy gain. However, the extinction of rich H2, CH4, CH4+H2, CO+H2, and lean C3H8 premixed flames was affected by the combined effects of preferential diffusion and incomplete reaction indicating that the effective Lewis number was larger than unity. In CO premixed flames, incomplete reaction was dominant in both lean and rich cases due to the effective Lewis number close to unity. The effect of H2 mixing to CO is found to be quite significant as compared to CH4+H2 cases, which can alter the flame behavior of CO flames to that of H2.

  17. From the neurobiology of extinction to improved clinical treatments.

    Science.gov (United States)

    Morrison, Filomene G; Ressler, Kerry J

    2014-04-01

    The neural circuitry underlying the fear response is extremely well conserved across mammalian species, which has allowed for the rapid translation of research findings in rodent models of fear to therapeutic interventions in human populations. Many aspects of exposure-based psychotherapy treatments in humans, which are widely used in the treatment of PTSD, panic disorder, phobias, and other anxiety disorders, are closely paralleled by extinction training in rodent fear conditioning models. Here, we discuss how the neural circuitry of fear learning and extinction in rodent animal models may be used to understand the underlying neural circuitry of fear-related disorders, such as PTSD in humans. We examine the factors that contribute to the pathology and development of PTSD. Next, we will review how fear is measured in animal models using classical Pavlovian fear conditioning paradigms, as well as brain regions such as the amygdala, which are involved in the fear response across species. Finally, we highlight the following three systems involved in the extinction of fear, all of which represent promising avenues for therapeutic interventions in the clinic: (1) the role of the glutamatergic N-methyl-d-aspartate (NMDA) receptor, (2) the role of the brain-derived neurotrophic factor (BDNF)-tyrosine kinase B (TrkB) induced signaling pathway, and (3) the role of the renin-angiotensin system. The modulation of pathways underlying fear learning and extinction, such as the ones presented in this review, in combination with extinction-based exposure therapy, represents promising avenues for therapeutic intervention in the treatment of human fear related disorders.

  18. Global warming and extinctions of endemic species from biodiversity hotspots.

    Science.gov (United States)

    Malcolm, Jay R; Liu, Canran; Neilson, Ronald P; Hansen, Lara; Hannah, Lee

    2006-04-01

    Global warming is a key threat to biodiversity, but few researchers have assessed the magnitude of this threat at the global scale. We used major vegetation types (biomes) as proxies for natural habitats and, based on projected future biome distributions under doubled-CO2 climates, calculated changes in habitat areas and associated extinctions of endemic plant and vertebrate species in biodiversity hotspots. Because of numerous uncertainties in this approach, we undertook a sensitivity analysis of multiple factors that included (1) two global vegetation models, (2) different numbers of biome classes in our biome classification schemes, (3) different assumptions about whether species distributions were biome specific or not, and (4) different migration capabilities. Extinctions were calculated using both species-area and endemic-area relationships. In addition, average required migration rates were calculated for each hotspot assuming a doubled-CO2 climate in 100 years. Projected percent extinctions ranged from global vegetation model and then by migration and biome classification assumptions. Bootstrap comparisons indicated that effects on hotpots as a group were not significantly different from effects on random same-biome collections of grid cells with respect to biome change or migration rates; in some scenarios, however, botspots exhibited relatively high biome change and low migration rates. Especially vulnerable hotspots were the Cape Floristic Region, Caribbean, Indo-Burma, Mediterranean Basin, Southwest Australia, and Tropical Andes, where plant extinctions per hotspot sometimes exceeded 2000 species. Under the assumption that projected habitat changes were attained in 100 years, estimated global-warming-induced rates of species extinctions in tropical hotspots in some cases exceeded those due to deforestation, supporting suggestions that global warming is one of the most serious threats to the planet's biodiversity.

  19. Estimating interstellar extinction toward to elliptical galaxies and star clusters

    Science.gov (United States)

    Amores, E. B.; Lépine, J. R. D.

    2006-08-01

    The ability to estimate interstellar extinction is essential for color corrections and distance calculations of all sorts of astronomical objects being fundamental for galactic structure studies. We performed comparisons of interstellar extinction models by Amores & Lépine ( 2005). These models are based on the hypothesis that gas and dust are homogeneously mixed, and make use of the dust-to gas ratio. The gas density distribution used in the models is obtained from the gas large scale surveys: Berkeley and Parkes HI surveys and from the Columbia University CO survey. In the present work, we compared these models with extinction predictions of elliptical galaxies (gE) and star clusters. We used the similar sample of gE galaxies proposed by Burstein for the comparison between the extinction calculation methods of Burstein & Heiles (1978, 1982) and of Schlegel et al. (1998) extending the comparison to our models. We found rms differences equal to 0.0179 and 0.0189 mag respectively, in the comparison of the predictions of our "model A" with the two methods mentioned. The comparison takes into account the "zero points" introduced by Burstein. The correlation coefficient obtained in the comparison is around 0.85. These results bring to light that our models can be safely used for the estimation of extinction in our Galaxy for extragalactic work, as an alternative method to the BH and SFD predictions. In the comparison with the globular clusters we found rms differences equal to 0.32 and 0.30 for our models A and S, respectively. For the open clusters we made comparisons using different samples and the rms differences were around 0.25.

  20. Estimating interstellar extinction towards elliptical galaxies and star clusters.

    Science.gov (United States)

    de Amôres, E. B.; Lépine, J. R. D.

    The ability to estimate interstellar extinction is essential for color corrections and distance calculations of all sorts of astronomical objects being fundamental for galactic structure studies. We performed comparisons of interstellar extinction models by Amores & Lépine (2005) that are available at: http://www.astro.iag.usp.br/\\symbol{126}amores. These models are based on the hypothesis that gas and dust are homogeneously mixed, and make use of the dust-to gas ratio. The gas density distribution used in the models is obtained from the gas large scale surveys: Berkeley and Parkes HI surveys and from the Columbia University CO survey. In the present work, we compared these models with extinction predictions of elliptical galaxies (gE) and star clusters. We used the similar sample of gE galaxies proposed by Burstein for the comparison between the extinction calculation methods of Burstein & Heiles (1978, 1982) and of Schlegel et al. (1998) extending the comparison to our models. We found rms differences equal to 0.0179 and 0.0189 mag respectively, in the comparison of the predictions of our "model A" with the two methods mentioned. The comparison takes into account the "zero points" introduced by Burstein. The correlation coefficient obtained in the comparison is around 0.85. These results bring to light that our models can be safely used for the estimation of extinction in our Galaxy for extragalactic work, as an alternative method to the BH and SFD predictions. In the comparison with the globular clusters we found rms differences equal to 0.32 and 0.30 for our models A and S, respectively. For the open clusters we made comparisons using different samples and the rms differences were around 0.25.

  1. A Comparison of Resistance to Extinction Following Dynamic and Static Schedules of Reinforcement

    OpenAIRE

    Craig, Andrew R.

    2013-01-01

    Resistance to extinction of single-schedule performance is negatively related to the reinforcer rate that an organism experienced in the pre-extinction context. This finding opposes the predications of behavioral momentum theory, which states that resistance to change, in general, is positively related to reinforcer rates. The quantitative model of extinction provided by behavioral momentum theory can describe resistance to extinction following single schedules in a post-hoc fashion, and only...

  2. Inter-taxa differences in extinction process of Maokouan (Middle Permian) fusulinaceans

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Analyses of the extinction process of fusulinacean in the Maokouan (Middle Permian) biotic crisis have revealed remarkable differences between taxa with various morphological features. Nankinellinids suffered a heavy loss of species in the early stage of the Maokouan event. Schwagerinids and neoschwagerinids both showed a stepwise decrease in species diversity, but the pulses of species extinction occurred in different stages of the extinction process. The species extinction of verbeekinids happened primarily in the Late Maokouan.

  3. Macrofossil evidence for a rapid and severe Cretaceous–Paleogene mass extinction in Antarctica

    OpenAIRE

    Witts, JD; Whittle, RJ; Wignall, PB; Crame, JA; Francis, JE; Newton, RJ; Bowman, VC

    2016-01-01

    Debate continues about the nature of the Cretaceous–Paleogene (K–Pg) mass extinction event. An abrupt crisis triggered by a bolide impact contrasts with ideas of a more gradual extinction involving flood volcanism or climatic changes. Evidence from high latitudes has also been used to suggest that the severity of the extinction decreased from low latitudes towards the poles. Here we present a record of the K–Pg extinction based on extensive assemblages of marine macrofossils (primarily new da...

  4. Functional analysis and extinction of different behavior problems exhibited by the same individual.

    OpenAIRE

    Richman, D M; Wacker, D P; Asmus, J M; Casey, S D

    1998-01-01

    Specific extinction procedures were matched to the function of two target behaviors displayed by the same individual, with results indicating that the matched extinction procedure suppressed the behavior for which it was designed. One of the target behaviors was exposed to an irrelevant extinction procedure, which produced no beneficial effects. These results support previous research indicating the need to match extinction procedures to the function of problem behavior.

  5. Systemic blockade of D2-like dopamine receptors facilitates extinction of conditioned fear in mice

    OpenAIRE

    Ponnusamy, Ravikumar; Nissim, Helen A.; Barad, Mark

    2005-01-01

    Extinction of conditioned fear in animals is the explicit model of behavior therapy for human anxiety disorders, including panic disorder, obsessive-compulsive disorder, and post-traumatic stress disorder. Based on previous data indicating that fear extinction in rats is blocked by quinpirole, an agonist of dopamine D2 receptors, we hypothesized that blockade of D2 receptors might facilitate extinction in mice, while agonists should block extinction, as they do in rats. One day after fear con...

  6. HDAC3-selective inhibitor enhances extinction of cocaine-seeking behavior in a persistent manner

    OpenAIRE

    Malvaez, Melissa; McQuown, Susan C; Rogge, George A.; Astarabadi, Mariam; Jacques, Vincent; Carreiro, Samantha; Rusche, James R.; Wood, Marcelo A.

    2013-01-01

    Nonspecific histone deacetylase (HDAC) inhibition has been shown to facilitate the extinction of drug-seeking behavior in a manner resistant to reinstatement. A key open question is which specific HDAC is involved in the extinction of drug-seeking behavior. Using the selective HDAC3 inhibitor RGFP966, we investigated the role of HDAC3 in extinction and found that systemic treatment with RGFP966 facilitates extinction in mice in a manner resistant to reinstatement. We also investigated whether...

  7. Effects of sleep on memory for conditioned fear and fear extinction

    OpenAIRE

    Pace-Schott, Edward F.; Germain, Anne; Milad, Mohammed R.

    2015-01-01

    Learning and memory for extinction of conditioned fear is a basic mammalian mechanism for regulating negative emotion. Sleep promotes both the consolidation of memory and the regulation of emotion. Sleep can influence consolidation and modification of memories associated with both fear and its extinction. After brief overviews of the behavior and neural circuitry associated with fear conditioning, extinction learning and extinction memory in the rodent and human, interactions of sleep with th...

  8. Forming competing fear learning and extinction memories in adolescence makes fear difficult to inhibit

    OpenAIRE

    Baker, Kathryn D.; Richardson, Rick

    2015-01-01

    Fear inhibition is markedly impaired in adolescent rodents and humans. The present experiments investigated whether this impairment is critically determined by the animal's age at the time of fear learning or their age at fear extinction. Male rats (n = 170) were tested for extinction retention after conditioning and extinction at different ages. We examined neural correlates of impaired extinction retention by detection of phosphorylated mitogen-activated protein kinase immunoreactivity (pMA...

  9. The Memory System Engaged During Acquisition Determines the Effectiveness of Different Extinction Protocols

    OpenAIRE

    Jarid eGoodman; Mark ePackard

    2015-01-01

    Previous research indicates that extinction of rodent maze behavior may occur without explicit performance of the previously required response. In latent extinction, confining an animal to a previously rewarded goal location without reinforcement is typically sufficient to produce extinction of maze learning. However, previous studies have not determined whether latent extinction may be successfully employed to extinguish all types of memory acquired in the maze, or whether only specific typ...

  10. Context-Dependent Human Extinction Memory Is Mediated by a Ventromedial Prefrontal and Hippocampal Network

    OpenAIRE

    Kalisch, R; Korenfeld, E; Stephan, K.E.; Weiskopf, N.; Seymour, B; Dolan, R.J.

    2006-01-01

    In fear extinction, an animal learns that a conditioned stimulus (CS) no longer predicts a noxious stimulus [unconditioned stimulus (UCS)] to which it had previously been associated, leading to inhibition of the conditioned response (CR). Extinction creates a new CS-noUCS memory trace, competing with the initial fear (CS-UCS) memory. Recall of extinction memory and, hence, CR inhibition at later CS encounters is facilitated by contextual stimuli present during extinction training. In line wit...

  11. Is synthetic biology mechanical biology?

    Science.gov (United States)

    Holm, Sune

    2015-12-01

    A widespread and influential characterization of synthetic biology emphasizes that synthetic biology is the application of engineering principles to living systems. Furthermore, there is a strong tendency to express the engineering approach to organisms in terms of what seems to be an ontological claim: organisms are machines. In the paper I investigate the ontological and heuristic significance of the machine analogy in synthetic biology. I argue that the use of the machine analogy and the aim of producing rationally designed organisms does not necessarily imply a commitment to mechanical biology. The ideal of applying engineering principles to biology is best understood as expressing recognition of the machine-unlikeness of natural organisms and the limits of human cognition. The paper suggests an interpretation of the identification of organisms with machines in synthetic biology according to which it expresses a strategy for representing, understanding, and constructing living systems that are more machine-like than natural organisms.

  12. Computational biology

    DEFF Research Database (Denmark)

    Hartmann, Lars Røeboe; Jones, Neil; Simonsen, Jakob Grue

    2011-01-01

    Computation via biological devices has been the subject of close scrutiny since von Neumann’s early work some 60 years ago. In spite of the many relevant works in this field, the notion of programming biological devices seems to be, at best, ill-defined. While many devices are claimed or proved t...

  13. Extinction cascades partially estimate herbivore losses in a complete Lepidoptera--plant food web.

    Science.gov (United States)

    Pearse, Ian S; Altermatt, Florian

    2013-08-01

    The loss of species from an ecological community can have cascading effects leading to the extinction of other species. Specialist herbivores are highly diverse and may be particularly susceptible to extinction due to host plant loss. We used a bipartite food web of 900 Lepidoptera (butterfly and moth) herbivores and 2403 plant species from Central Europe to simulate the cascading effect of plant extinctions on Lepidoptera extinctions. Realistic extinction sequences of plants, incorporating red-list status, range size, and native status, altered subsequent Lepidoptera extinctions. We compared simulated Lepidoptera extinctions to the number of actual regional Lepidoptera extinctions and found that all predicted scenarios underestimated total observed extinctions but accurately predicted observed extinctions attributed to host loss (n = 8, 14%). Likely, many regional Lepidoptera extinctions occurred for reasons other than loss of host plant alone, such as climate change and habitat loss. Ecological networks can be useful in assessing a component of extinction risk to herbivores based on host loss, but further factors may be equally important.

  14. Young and Old Pavlovian Fear Memories Can Be Modified with Extinction Training during Reconsolidation in Humans

    Science.gov (United States)

    Steinfurth, Elisa C. K.; Kanen, Jonathan W.; Raio, Candace M.; Clem, Roger L.; Huganir, Richard L.; Phelps, Elizabeth A.

    2014-01-01

    Extinction training during reconsolidation has been shown to persistently diminish conditioned fear responses across species. We investigated in humans if older fear memories can benefit similarly. Using a Pavlovian fear conditioning paradigm we compared standard extinction and extinction after memory reactivation 1 d or 7 d following acquisition.…

  15. Reconciling Reinforcement Learning Models with Behavioral Extinction and Renewal: Implications for Addiction, Relapse, and Problem Gambling

    Science.gov (United States)

    Redish, A. David; Jensen, Steve; Johnson, Adam; Kurth-Nelson, Zeb

    2007-01-01

    Because learned associations are quickly renewed following extinction, the extinction process must include processes other than unlearning. However, reinforcement learning models, such as the temporal difference reinforcement learning (TDRL) model, treat extinction as an unlearning of associated value and are thus unable to capture renewal. TDRL…

  16. Use of extinction and reinforcement to increase food consumption and reduce expulsion.

    OpenAIRE

    Coe, D. A.; Babbitt, R L; Williams, K E; Hajimihalis, C; Snyder, A M; Ballard, C; Efron, L A

    1997-01-01

    Extinction and reinforcement contingencies were used to treat 2 children with feeding disorders. Positive reinforcement and avoidance extinction effectively increased food acceptance but also increased food expulsion. Reduced expulsion and increased swallowing were achieved by repeated presentation of expelled food, a second extinction component

  17. On the Relative Contributions of Noncontingent Reinforcement and Escape Extinction in the Treatment of Food Refusal

    Science.gov (United States)

    Reed, Gregory K.; Piazza, Cathleen C.; Patel, Meeta R.; Layer, Stacy A.; Bachmeyer, Melanie H.; Bethke, Stephanie D.; Gutshall, Katharine A.

    2004-01-01

    In the current investigation, we evaluated the relative effects of noncontingent reinforcement (NCR), escape extinction, and a combination of NCR and escape extinction as treatment for the feeding problems exhibited by 4 children. For each participant, consumption increased only when escape extinction was implemented, independent of whether NCR…

  18. Artificial neural networks can learn to estimate extinction rates from molecular phylogenies

    NARCIS (Netherlands)

    Bokma, Folmer

    2006-01-01

    Molecular phylogenies typically consist of only extant species, yet they allow inference of past rates of extinction, because. recently originated species are less likely to be extinct than ancient species. Despite the simple structure of the assumed underlying speciation-extinction process, paramet

  19. Memory Destabilization Is Critical for the Success of the Reactivation-Extinction Procedure

    Science.gov (United States)

    Piñeyro, Marcelo E.; Monti, Roque I. Ferrer; Alfei, Joaquín M.; Bueno, Adrián M.; Urcelay, Gonzalo P.

    2014-01-01

    It has been suggested that, unlike pure extinction which typically results in the return of the fear response under a variety of circumstances, memory reactivation followed by extinction can attenuate the reemergence of conditioned fear. The reactivation-extinction procedure has attracted the attention of basic and clinical researchers due to its…

  20. The Infralimbic Cortex Regulates the Consolidation of Extinction after Cocaine Self-Administration

    Science.gov (United States)

    LaLumiere, Ryan T.; Niehoff, Kate E.; Kalivas, Peter W.

    2010-01-01

    The infralimbic cortex (IL) regulates the consolidation of extinction learning for fear conditioning. Whether the IL influences the consolidation of extinction learning for cocaine self-administration is unknown. To address this issue, male Sprague-Dawley rats underwent 2 wk of cocaine self-administration followed by extinction training. On the…