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Sample records for benthic polychaete hediste

  1. Toxicological evaluation of sediment samples spiked with human pharmaceutical products: Energy status and neuroendocrine effects in marine polychaetes Hediste diversicolor.

    Science.gov (United States)

    Maranho, L A; André, C; DelValls, T A; Gagné, F; Martín-Díaz, M L

    2015-08-01

    There is a lack of studies about the ecotoxicology of pharmaceutical products on marine environment. To predict possible adverse effects of pharmaceutical products on benthic biota, polychaetes Hediste diversicolor were exposed for 14-days to pharmaceutical-spiked sediments under laboratory conditions. Carbamazepine (CBZ), ibuprofen (IBP) and propranolol (PRO) at concentrations of 500ngg(-1), 50ngg(-1), 5ngg(-1), 0.5ngg(-1) and 0.05ngg(-1), fluoxetine (FX) and 17α-ethynylestradiol (EE2) at concentrations of 100ngg(-1), 10ngg(-1), 1ngg(-1), 0.1ngg(-1) and 0.01ngg(-1), including environmental concentrations (underlined), were spiked in marine sediment samples. After the exposure, cellular energy status (total lipids content - TLP; and mitochondrial electron transport activity - MET), metabolism of monoamines (monoamine oxidase activity - MAO) and inflammation properties (cyclooxygenase activity - COX) were observed in polychaetes. CBZ increased TLP content and MET activity, and decreased MAO activity in polychaetes. IBP did not interfere on the TLP level, but on the MET and MAO activities (environmental concentrations). FX did not cause changes in the energy status. Therefore, environmental concentration diminished MAO activity. EE2 did not affect the energy status, however, MAO activity was significantly lower in polychaetes exposed to environmental concentration. PRO increased TLP level in polychaetes, but not MET activity. MAO activity was significantly lower for polychaetes exposed to environmental concentration. Except FX, all pharmaceuticals showed anti-inflammatory properties confirmed by the decrease of COX activity. Pharmaceutical products affected H. diversicolor physiology and health. As a benthic top predator, adverse effects on sea-worms can potentially culminate in ecosystem perturbations. Copyright © 2015 Elsevier Inc. All rights reserved.

  2. Metal accumulation in the polychaete Hediste japonica with emphasis on interaction between heavy metals and petroleum hydrocarbons

    International Nuclear Information System (INIS)

    Sun Fuhong; Zhou Qixing

    2007-01-01

    The accumulation of cadmium (Cd) and copper (Cu) in the polychaete Hediste japonica exposed to the mixture of Cd (or Cu) and petroleum hydrocarbons (PHCs) was investigated and compared with that exposed to single Cd (or Cu). The increased bioavailability of Cd or Cu with exposure concentrations resulted in an increase in the accumulation and net accumulation rate of Cd or Cu during single metal exposure. The net accumulation rate of Cd increased, but the net accumulation rate of Cu decreased with exposure time during single metal exposure, suggesting that H. japonica could actively regulate Cu burden in their body by inhibition of absolute uptake or promotion of excretion. The interactions between Cd (or Cu) and PHCs had complicated influences on the net accumulation rate of Cd and Cu in H. japonica under the condition of the binary mixture, which are dependent on their concentration combinations and exposure time. - The influences of petroleum hydrocarbons on Cd and Cu accumulation in H. japonica depend on their concentration combinations and exposure time

  3. Benthic polychaetes as good indicators of anthropogenic impact

    Digital Repository Service at National Institute of Oceanography (India)

    Sivadas, S.; Ingole, B.S.; Nanajkar, M.

    and SIVADAS et al. : BENTHIC POLYCHAETES AN ANTHROPOGENIC IMPACT 211 reclamation for berths 5A and 6A at Mormugao harbour. NIO/SP-32/2004. 18 Rivero M S, Elías R & Vallarino E A, First survey of macroinfauna in the Mar del Plata harbour (Argentina...

  4. Dynamic of sulphate-reducing microorganisms in petroleum-contaminated marine sediments inhabited by the polychaete Hediste diversicolor.

    Science.gov (United States)

    Stauffert, Magalie; Cravo-Laureau, Cristiana; Duran, Robert

    2015-10-01

    The behaviour of sulphate-reducing microbial community was investigated at the oxic-anoxic interface (0-2 cm) of marine sediments when submitted to oil and enhanced bioturbation activities by the addition of Hediste diversicolor. Although total hydrocarbon removal was not improved by the addition of H. diversicolor, terminal restriction fragment length polymorphism (T-RFLP) analyses based on dsrAB (dissimilatory sulphite reductase) genes and transcripts showed different patterns according to the presence of H. diversicolor which favoured the abundance of dsrB genes during the early stages of incubation. Complementary DNA (cDNA) dsrAB libraries revealed that in presence of H. diversicolor, most dsrAB sequences belonged to hydrocarbonoclastic Desulfobacteraceae, suggesting that sulphate-reducing microorganisms (SRMs) may play an active role in hydrocarbon biodegradation in sediments where the reworking activity is enhanced. Furthermore, the presence of dsrAB sequences related to sequences found associated to environments with high dinitrogen fixation activity suggested potential N2 fixation by SRMs in bioturbated-polluted sediments.

  5. Effect of high organic enrichment of benthic polychaete population in an estuary

    Digital Repository Service at National Institute of Oceanography (India)

    Ansari, Z.A.; Ingole, B.S.; Parulekar, A.H.

    The benthic polychaete fauna of an estuarine region receiving domestic sewage and wastes from a nearby fish landing jetty was compared to that of a site having normal organic enrichment. The population density, biomass and species diversity were...

  6. Burial of Zostera marina seeds in sediment inhabited by three polychaetes: laboratory and field studies

    DEFF Research Database (Denmark)

    Delefosse, Matthieu; Kristensen, Erik

    2012-01-01

    passively by sedimentation or actively through sediment reworking by benthic fauna.We evaluated the effect of three polychaetes on the burial rate and depth of eelgrass seeds. Burial was first measured in controlled laboratory experiments using different densities of Nereis (Hediste) diversicolor (400......–3200 ind m −2), Arenicola marina (20–80 ind m−2), and the invasive Marenzelleria viridis (400–1600 ind m −2). The obtained results were subsequently compared with burial rates of seed mimics in experimental field plots (1m2) dominated by the respective polychaetes. High recovery of seeds in the laboratory....... At their highest abundance, A. marina andM. viridis buried seeds to amedian depth of 6.7 cmand 0.5 cm, respectively, after amonth. The burial efficiency and depth of these species were, in contrast to N. diversicolor, dependent on animal abundance. Only 2% of seed mimics casted in the field plots were recovered...

  7. Hediste diversicolor as bioindicator of pharmaceutical pollution: Results from single and combined exposure to carbamazepine and caffeine.

    Science.gov (United States)

    Pires, Adília; Almeida, Ângela; Calisto, Vânia; Schneider, Rudolf J; Esteves, Valdemar I; Wrona, Frederick J; Soares, Amadeu M V M; Figueira, Etelvina; Freitas, Rosa

    2016-10-01

    Several environmental stressors have been identified as key and/or emerging drivers of habitat change that could significantly influence marine near-shore ecosystems. These include increasing discharges of pharmaceutical contaminants into the aquatic coastal systems. Pharmaceutical drugs are often detected in aquatic environments but still information on their toxicity impacts on inhabiting species is scarce, especially when acting in combination. Furthermore, almost no information is available on the impacts of pharmaceuticals in polychaetes, often the most abundant taxon in benthic communities and commonly used as indicator species of environmental conditions. Therefore, the present study aimed to evaluate the biochemical alterations induced in the polychaete Hediste diversicolor, from a low contaminated area at the Ria de Aveiro lagoon (Portugal), by the antiepileptic drug carbamazepine (0.0 - control, 0.3, 3.0, 6.0 and 9.0μg/L) and the stimulant caffeine (0.0 - control, 0.5, 3.0, and 18.0μg/L), acting alone and in combination (0.3 CBZ+0.5 CAF and 6.0 CBZ+3.0 CAF). Glutathione S-transferases (GSTs), superoxide dismutase (SOD) and catalase (CAT) activities was determined in Hediste diversicolor from each condition. Lipid peroxidation (LPO), glutathione reduced and oxidized (GSH and GSSG), glycogen and electron transport system (ETS) were also measured. The results obtained clearly revealed that both drugs induced oxidative stress in H. diversicolor, shown by the increase on LPO levels and decrease on total glutathione and GSH/GSSG ratio with the increase of exposure concentrations. Furthermore, the present findings demonstrated that polychaetes biotransformation capacity as well as antioxidant defense mechanisms were not sufficiently efficient to fight against the excess of reactive oxygen species (ROS) leading to LPO when organisms were exposed to both drugs. Our results also demonstrated that polychaetes tended to decrease the activity of ETS when exposed to

  8. Benthic polychaetes in the Ratnagiri bay, India: Influence of anthropogenic factors

    Digital Repository Service at National Institute of Oceanography (India)

    Sukumaran, S.; Bhokepode, K.; Telavane, M.; Kubal, P.; Gajbhiye, S.N.

    by anthropogenic wastes as demonstrated by the anoxic conditions coupled with higher nutrient load, had comparatively higher H’ values (1.9 and 1.6) and better evenness values (0.9 and 0.7) during both seasons indicating that the polychaetes were not influenced...

  9. Biodiversity of benthic polychaetes from the coastal waters of Paradip, Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    Ingole, B.S.

    Polychaete communities of the subtidal waters off Paradip, Orissa, India (Lat, 20 degrees 05 minutes - 20 degrees 20 minutes N and Long. 86 degrees 35 minutes - 86 degrees 60 minutes E) in the Bay of Bengal were studied on a seasonal basis...

  10. Comparative Effects of Ingested PVC Micro Particles With and Without Adsorbed Benzo(apyrene vs. Spiked Sediments on the Cellular and Sub Cellular Processes of the Benthic Organism Hediste diversicolor

    Directory of Open Access Journals (Sweden)

    Alessio Gomiero

    2018-04-01

    Full Text Available Plastic micro litter represents an emerging contaminant as well as a multiple stress agent in aquatic environments. Microplastics are found even in the remote areas of the world. Together with their occurrence in all environmental compartments, there is a growing concern about their potential to adsorb pollutants co-occurring in the environment. At present, little is known about this source of exposure for aquatic organisms in the benthic environment. Exposure conditions were set up to mimick the contribution of microplastics through different exposure routes. Potential biological effects resulting from these exposures were investigated in the model organism Hediste diversicolor, an annelid worm. Cellular effects including alterations of immunological responses, lysosomal compartment changes, mitochondrial activity, oxyradical production and onset of genotoxicity were assessed in coelomocytes while temporary and permanent effects of oxidative stress were also performed at tissue level. In this study polyvinylchloride (PVC microparticles were shown to adsorb benzo(apyrene with a time and dose-dependent relationship. The elevated bioavailability of the model pollutant after ingestion induced a clear pattern of biological responses. Toxicity mainly targeted impairment of cellular functioning and genotoxicity in H. diversicolor coelomocytes, while permanent effects of oxidative stress were observed at tissue level. Coelomocytes responded fast and with a higher degree of sensitivity to the adverse stimuli. The results showed that microplastic particles in sediments may play a significant role as vectors for organic pollutants. The highest adverse responses were observed in those H. diversicolor exposed to sediments spiked with PVC particles pre-incubated with B[a]P when compared against sediments spiked with B[a]P and plastic microparticles separately.

  11. Bar-tailed Godwits Limosa l. lapponica eat polychaete worms wherever they winter in Europe

    NARCIS (Netherlands)

    Duijns, Sjoerd; Hidayati, Nur Annis; Piersma, Theunis

    2013-01-01

    Capsule: Across the European wintering range Bar-tailed Godwits Limosa lapponica lapponica selected polychaete worms and especially Ragworms Hediste diversicolor, with differences between areas due to variations in prey availability. Aims: To determine the diet of Bar-tailed Godwits across their

  12. Biotransformation of dichlorodiphenyltrichloroethane in the benthic polychaete, Nereis succinea: quantitative estimation by analyzing the partitioning of chemicals between gut fluid and lipid.

    Science.gov (United States)

    Wang, Fei; Pei, Yuan-yuan; You, Jing

    2015-02-01

    Biotransformation plays an important role in the bioaccumulation and toxicity of a chemical in biota. Dichlorodiphenyltrichloroethane (DDT) commonly co-occurs with its metabolites (dichlorodiphenyldichloroethane [DDD] and dichlorodiphenyldichloroethylene [DDE]), in the environment; thus it is a challenge to accurately quantify the biotransformation rates of DDT and distinguish the sources of the accumulated metabolites in an organism. The present study describes a method developed to quantitatively analyze the biotransformation of p,p'-DDT in the benthic polychaete, Nereis succinea. The lugworms were exposed to sediments spiked with DDT at various concentrations for 28 d. Degradation of DDT to DDD and DDE occurred in sediments during the aging period, and approximately two-thirds of the DDT remained in the sediment. To calculate the biotransformation rates, residues of individual compounds measured in the bioaccumulation testing (after biotransformation) were compared with residues predicted by analyzing the partitioning of the parent and metabolite compounds between gut fluid and tissue lipid (before biotransformation). The results suggest that sediment ingestion rates decreased when DDT concentrations in sediment increased. Extensive biotransformation of DDT occurred in N. succinea, with 86% of DDT being metabolized to DDD and biotransformation, and the remaining 30% was from direct uptake of sediment-associated DDD. In addition, the biotransformation was not dependent on bulk sediment concentrations, but rather on bioaccessible concentrations of the chemicals in sediment, which were quantified by gut fluid extraction. The newly established method improved the accuracy of prediction of the bioaccumulation and toxicity of DDTs. © 2014 SETAC.

  13. Organochlorines in benthic polychaetes (Nephtys Spp.) and sediments from the southern North Sea. identification of individual PCB components

    Science.gov (United States)

    Boon, J. P.; Van Zantvoort, M. B.; Govaert, M. J. M. A.; Duinker, J. C.

    ΣPCB concentrations (as the sum of concentrations of 35 individual components) on a lipid basis varied more than an order of magnitude between samples of polychaete worms ( Nephtys spp.) from different stations in the southern North Sea. PCB patterns, i.e. the relative contribution of each component to ΣPCB, were highly similar for the larger part of the area. The geographical differences between concentrations of PCB's reflected the general routes of residual water and suspended particulate matter transport throughout the North Sea. The Rhine is likely to be the main source for PCB's in Dutch coastal waters, including the entire coastline formed by the Dutch Wadden Sea islands. Theoretical patterns of PCB's in solution were calculated from the PCB patterns in Nepthys and values of bioconcentration factors reported. Concentrations of HCB, α- and γ-HCH, dieldrin, p,p'-DDD and p,p'-DDT were at least an order of magnitude lower and close to, or even below, detection limit in most samples. Although concentrations of α-and γ-HCH in solution were the highest of the compounds investigated, their concentrations in Nephtys were among the lowest, which might have been due to their relatively high solubility in water, or metabolism to more polar derivatives. Based on total sediment analyses, organochlorine concentrations in Nephtys spp. were not correlated with the concentrations in the (type of) sediment which they inhabited. In sediments the fraction of grains <63 μm appeared to be very important. A sewer outlet near Grimsby (U.K.) was found to be a source for HCB and Σ-DDT.

  14. Development and validation of an experimental life support system for assessing the effects of global climate change and environmental contamination on estuarine and coastal marine benthic communities.

    Science.gov (United States)

    Coelho, Francisco J R C; Rocha, Rui J M; Pires, Ana C C; Ladeiro, Bruno; Castanheira, José M; Costa, Rodrigo; Almeida, Adelaide; Cunha, Angela; Lillebø, Ana Isabel; Ribeiro, Rui; Pereira, Ruth; Lopes, Isabel; Marques, Catarina; Moreira-Santos, Matilde; Calado, Ricardo; Cleary, Daniel F R; Gomes, Newton C M

    2013-08-01

    An experimental life support system (ELSS) was constructed to study the interactive effects of multiple stressors on coastal and estuarine benthic communities, specifically perturbations driven by global climate change and anthropogenic environmental contamination. The ELSS allows researchers to control salinity, pH, temperature, ultraviolet radiation (UVR), tidal rhythms and exposure to selected contaminants. Unlike most microcosms previously described, our system enables true independent replication (including randomization). In addition to this, it can be assembled using commercially available materials and equipment, thereby facilitating the replication of identical experimental setups in different geographical locations. Here, we validate the reproducibility and environmental quality of the system by comparing chemical and biological parameters recorded in our ELSS with those prevalent in the natural environment. Water, sediment microbial community and ragworm (the polychaete Hediste diversicolor) samples were obtained from four microcosms after 57 days of operation. In general, average concentrations of dissolved inorganic nutrients (NO3 (-) ; NH4 (+) and PO4 (-3) ) in the water column of the ELSS experimental control units were within the range of concentrations recorded in the natural environment. While some shifts in bacterial community composition were observed between in situ and ELSS sediment samples, the relative abundance of most metabolically active bacterial taxa appeared to be stable. In addition, ELSS operation did not significantly affect survival, oxidative stress and neurological biomarkers of the model organism Hediste diversicolor. The validation data indicate that this system can be used to assess independent or interactive effects of climate change and environmental contamination on benthic communities. Researchers will be able to simulate the effects of these stressors on processes driven by microbial communities, sediment and seawater

  15. Trophic structure of polychaetes around an offshore gas platform.

    Science.gov (United States)

    Punzo, E; Strafella, P; Scarcella, G; Spagnolo, A; De Biasi, A M; Fabi, G

    2015-10-15

    The distribution of polychaetes associated with an offshore gas platform built on a muddy-sandy bottom in the northern Adriatic Sea was investigated with emphasis on their feeding structure. Polychaete species were collected at different distances from the rig using a Van Veen grab. Assessment of the polychaete community and trophic groups for impacts related to the presence of the platform demonstrated significantly different abundances at rising distances from the rig. The present findings highlight an effect of the rig on the spatial distribution of polychaete assemblages. Even though the effects of gas platforms on surrounding benthic communities have been investigated in the Adriatic Sea, no studies have addressed the distribution of polychaete trophic groups along a gradient based on distance from the rig. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. Polychaete community structure of Indian west coast shelf, Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Joydas, T.V.; Jayalakshmy, K.V.; Damodaran, R.

    . The present study investigates the scope of TS in benthic fauna of con- tinental shelf off the west coast of India, where our study 12 has shown that the depth and natural environmental gradi- ents influence the distribution and abun- dance of polychaetes.... The present study confirmed that in the western con- tinental shelf of India, genus and family aggregations of polychaetes show similar community response as that of species on a depth gradient in this environment. Our high resolution data showed...

  17. Toxicity and bioaccumulation of sediment-associated silvernanoparticles in the estuarine polychaete, Nereis (Hediste) diversicolor

    DEFF Research Database (Denmark)

    Cong, Yi; Banta, Gary Thomas; Selck, Henriette

    2014-01-01

    regardless of the form in which it was added to the sediment, and worm size (expressed as dry weight) was found to significantly affect bioaccumulation such that smaller worms accumulated more Ag per body weight than larger worms. Lysosomal membrane permeability (neutral red retention time, NRRT) and DNA...... after 10 d of exposure. Both Ag NP types were characterized in parallel to the toxicity studies and found to be polydispersed and overlapping in size. Burrowing activity decreased (marginally) with increasing Ag concentration and depended on the form of Ag added to sediment. All worms accumulated Ag...

  18. Indirect control of the intracellular nitrate pool of intertidal sediment by the polychaete Hediste diversicolor

    DEFF Research Database (Denmark)

    Heisterkamp, Ines Maria; Kamp, Anja; Schramm, Angela T.

    2012-01-01

    that of the photopigments chlorophyll a and fucoxanthin, strongly suggesting that diatoms were the main nitrate-storing organisms. Intra- cellular nitrate formation is thus stimulated by the interaction of phylogenetically distant groups of organisms: worms enhance nitrification by feeding on particulate organic matter...

  19. Impacts of the 2011 tsunami on the subtidal polychaete assemblage and the following recolonization in Onagawa Bay, northeastern Japan.

    Science.gov (United States)

    Abe, Hirokazu; Kobayashi, Genki; Sato-Okoshi, Waka

    2015-12-01

    The ecological impacts of the 2011 Great East Japan Earthquake and tsunami and the following recolonization of the subtidal benthic polychaete community were examined by monthly pre- and post-quake field surveys that were conducted in Onagawa Bay from 2007 to 2013. Before the tsunami, the species composition in this benthic community was constant and was dominated by cirratulid and magelonid polychaetes. The density and biomass of benthic polychaetes drastically decreased after the tsunami, and the polychaete community fluctuated during the 2 years after the natural disaster. Spionid and capitellid polychaetes were dominant at this period. In June 2013, the community entered a new constant stage dominated by maldanids, which is different from the pre-quake community. Ecological impacts due to chemical pollution were suggested in addition to the tsunami disturbance. These overlapping effects and physical, chemical and biological factors affected the recovery and recolonization of the polychaete community after the natural disaster. Copyright © 2015 Elsevier Ltd. All rights reserved.

  20. Polychaetes of commercial interest from the Mediterranean East Coast of Algeria

    Directory of Open Access Journals (Sweden)

    M. YOUNSI

    2010-03-01

    Full Text Available Three species of polychaetous annelids are commercially collected, as baits, from natural populations along the coast of Algeria. They are collected by semi-professional bait harvesters supplying a variety of local outlets and are used as bait by local fishermen. Bait harvesters commonly use bleaching liquid (10% in sea water or a KMnO4 (0.5 to 1% in sea water solution to force Perinereis cultrifera (Nereididae individuals out of their algal mat. Hediste diversicolor (Nereididae and Scolelepis squamata(Spionidae are dug from intertidal mudflats and sandy beaches. Commercial prices and ways of utilization are given for each species. The necessity for the legislative establishment of a regulatory management plan for worm angling is demonstrated.

  1. Toxic effects and bioaccumulation of nano-, micron- and aqueous-Ag in the estuarine polychaete, Nereis (Hediste) diversicolor

    DEFF Research Database (Denmark)

    cong, Yi

    Rapidly expanding growth in the field of nanotechnology has led to the development of numerous applications of nanomaterials in industrial and consumer products. Nanosilver is one of the most commonly used nanomaterials due to its effective antibacterial properties. However, there is increasing...

  2. Polychaetes from Aysen Fjord, Chile: distribution, abundance and biogeographical comparison with the shallow soft-bottom polychaete fauna from Antarctica and the Magellan Province

    Directory of Open Access Journals (Sweden)

    J. I. Cañete

    1999-12-01

    Full Text Available This paper analyzes the composition, abundance and biogeographical relationship of the benthic polychaetes collected in three shallow subtidal locations (mouth of Cuervo and Condor rivers and Acantilada Bay from Aysen Fjord, AF, Chile (45ºS, 73ºW, and provides a comparison with data on shallow soft-bottom polychaetes from Antarctica and other locations of the Magellan Province: Dalcahue Channel, DC (42º22´S, 73º39´W, Puerto Cisnes, Puyuhuapi Channel, PC (44º43´S, 72º42´W and Magellan Straits, MS. AF polychaete fauna comprises 38 species, the macrobenthic taxon being most representative in terms of abundance and species richness. The importance of polychaetes seems to be higher in fjords than in channels. Low numbers of common species were detected among DC, PC, MS and AF, indicating differences along the influence area of the Cape Horn Current or along the Magellan Province. The polychaetes from AF show low affinities with Antarctica; maximum number of common species was observed with the Antarctic Peninsula, whereas the lowest values were recorded from locations in the Ross and Weddell Seas. Coincidence in some ecological attributes between AF and Antarctica indicate that polychaetes may play an important and similar ecological role in both environments.

  3. Temporal genetic structure in a poecilogonous polychaete: the interplay of developmental mode and environmental stochasticity

    DEFF Research Database (Denmark)

    Hansen, Benni Winding; Kesäniemi, Jenni E; Mustonen, Marina

    2014-01-01

    elegans, a poecilogonous polychaete with within-species variation in developmental mode. P. elegans produces either planktonic, benthic, or intermediate larvae, varying both among and within populations, providing a within-species test of the generality of a relationship between temporal genetic variation...

  4. Short Communication Tube-forming polychaetes enhance ...

    African Journals Online (AJOL)

    bottom systems in the North Atlantic where polychaete tube densities are often much higher. Keywords: habitat formation, onuphid polychaete, species richness, western Indian Ocean African Journal of Marine Science 2011, 33(2): 327–332 ...

  5. A census of abyssal polychaetes

    Science.gov (United States)

    Paterson, Gordon L. J.; Glover, Adrian G.; Barrio Froján, Christopher R. S.; Whitaker, Amoret; Budaeva, Nataliya; Chimonides, Jim; Doner, Stacy

    2009-09-01

    As part of the Census of Marine Life's programme of summarising existing knowledge of the oceans, records of all polychaete species collected below 2000 m have been collated from the literature. A total of 3633 records was assembled into a database, revealing that 768 species, 358 of which were new to science, have been reported from the deep sea over the past 200 years. The limitations of the dataset are also discussed. Most of the records were obtained from between 2000 m, the upper depth range of the study, and 4000 m. Analyses of the distribution of records with time reveals that the majority of records were added in the 1960s to early 1980s, coincidental with the introduction of new collecting technologies. However, following this period there was a gap between the collecting of samples and the publication of taxonomic results. To reduce this time lag we are encouraging the use of the world-wide web with new tools and protocols to bring together taxonomists working on different sample sets and allow them to share and compare taxonomic data. As this is the first collation of abyssal polychaetes, the records were analysed to determine whether there is a distinct hadal fauna and whether the fauna of individual trenches was distinctive or a subset of the abyssal plain fauna. The results suggest that the hadal fauna contains few endemic species and that the majority are elements of the abyssal fauna that have extended their bathymetric range.

  6. Spatial intertidal distribution of bivalves and polychaetes in relation to environmental conditions in the Natori River estuary, Japan

    Science.gov (United States)

    Tomiyama, Takeshi; Komizunai, Nobuhiro; Shirase, Tatsuya; Ito, Kinuko; Omori, Michio

    2008-11-01

    This paper aims to reveal spatial variation in the abundance of infaunal bivalves and polychaetes at different spatial scales (station: 200-800 m intervals; plot: 5-20 m), and to reveal environmental variables affecting the spatial distribution of animals in the Natori River estuary, Japan. We found six bivalve species and eight polychaete species from 52 plots at 12 stations. Nuttallia olivacea and Heteromastus sp. were found to be the most abundant species of bivalves and polychaetes, respectively. Assemblage patterns of bivalves and polychaetes were classified into five distinct groups. Substrata (silt-clay contents), salinity, and relative elevation were the variables found to affect the infaunal assemblage patterns. Chlorophyll a was not a significant variable, but benthic animals were absent at sites with extremely low chlorophyll a conditions. Macrobenthic assemblage patterns were different not only between stations but often differed between plots at the same station, reflecting the complex assemblage structure of benthic invertebrates. Detailing such animal-environment relationship is essential in understanding the potential food supply for estuarine fishes.

  7. Spatio-temporal changes in trophic categories of infaunal polychaetes near the four wastewater ocean outfalls on Oahu, Hawaii.

    Science.gov (United States)

    Shuai, Xiufu; Bailey-Brock, Julie H; Lin, David T

    2014-07-01

    This study examines the effect of sewage discharge on benthic polychaete assemblages in the context of their functional trophic categories. We present data spanning 20 years of monitoring benthic invertebrate assemblages and sediment properties at all 4 primary- and secondary-treatment wastewater outfalls servicing Honolulu and the island of Oahu, Hawaii, USA. Samples collected within mandated zones of initial dilution (ZIDs) near outfall discharge sites were compared to samples collected at reference stations at varying distances away. Our findings indicate that sediment properties were not affected by the outfall discharge rate or distance from each ZID. The number of polychaete species in 4 functional trophic categories (carnivore, detritivore, omnivore, and suspension feeder) did not change with the outfall solid loading rate or with distance from each ZID, thus suggesting relatively little organic enrichment. We find no evidence of heavy organic enrichment beyond the designated ZIDs at these 4 wastewater outfalls. Copyright © 2014 Elsevier Ltd. All rights reserved.

  8. Survey of the marine benthic infauna collected from the United States radioactive waste disposal sites off the Farallon Islands, California. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Reish, D.J.

    1983-01-01

    Benthic biological samples were taken in 1977 from the vicinity of the Farallon Islands radioactive waste disposal sites for characterization of the infaunal macroinvertebrates and foraminifera. A total of 120 invertebrate species were collected, of which 75 species (63 percent) were polychaetes. Forty-three of these polychaete species have not previously been reported from depths greater than 1000m. A total of 1044 macroinvertebrate specimens were collected of which 54 percent were polychates. Only the nematods were present at all six benthic stations, but the community structure was dominated by the polychaetes Tauberia gracilis, Allia pulchra, Chaetozone setosa, and Cossura candida. Living and dead foraminifera were reported. The possible role of polychaetes in bioturbation and in the marine food chain is briefly discussed with respect to the various polychaete feeding mechanisms.

  9. Benthic foraminifera

    Digital Repository Service at National Institute of Oceanography (India)

    Saraswat, R.; Nigam, R.

    sensitive to the changes in ambient environment. The response of benthic foraminifera to the changes in the ambient environment is incorporated in their tests, which have high preservation potential. Therefore, the characteristics of the benthic...

  10. Ecological implications of changes in polychaetes population in a shallow Danish estuary

    DEFF Research Database (Denmark)

    Delefosse, Matthieu

    Burrowing polychaetes are typically the most numerous and active class among macrobenthic infauna in Danish estuaries. Their ecological role is well-recognized and has been often associated with their bioturbating activities. Construction and maintenance of galleries as well as ingestion and defe......Burrowing polychaetes are typically the most numerous and active class among macrobenthic infauna in Danish estuaries. Their ecological role is well-recognized and has been often associated with their bioturbating activities. Construction and maintenance of galleries as well as ingestion...... and defecation displace sediment particles. Ventilation of their burrow irrigates the sediment. These activities transform the environment for other species: from microbes to plants (MS5). Given the important relations between bioturbating polychaetes and their ecosystem, any significant changes in population...... of a key species may have consequent impact on the ecosystem. The introduction of non-native species is an important vector of change for the often species-poor benthic community of Danish estuaries. Non-native species may bring new functions but also interact with native fauna species. The work presented...

  11. Predicting the composition of polychaete assemblages in the Aegean coast of Turkey

    Directory of Open Access Journals (Sweden)

    Marika Galanidi

    2016-08-01

    Full Text Available Benthic infaunal species and communities have been extensively used to evaluate quality of the marine environment. Within the MSFD, community composition is addressed most commonly through Descriptor 6 (Seafloor integrity, criterion 6.2 (Condition of benthic communities. At the same time, the Directive has stipulations for addressing and assessing indicators linked with pressures in an explicitly spatial manner. At larger scales, achieving this through point sampling may be impractical or unfeasible; hence predictive methods are being increasingly employed to produce the large scale spatial data that are often required for marine spatial planning and management.The aim of the current work was to develop statistical and spatial modelling tools that can predict the distribution of soft-sediment benthic polychaetes in the Aegean coast of Turkey. To do that, we employed Species Archetype Models (SAMs, a novel analytical and modelling framework which uses mixture models to cluster species responses to the environment, producing a number of archetypal responses assumed to represent species with similar ecological/physiological tolerances. Polychaete presence/absence data were obtained from the literature and modelling was performed against environmental variables reflecting the main natural and anthropogenic gradients in the region. The resulting models are interpreted in light of the sensitivity/tolerance classification scheme for benthic invertebrates.Three Species Archetypes were identified through the analysis. In brief, Species Archetype 1 consists of the most prevalent species in the dataset and primarily follows the salinity and temperature gradients. Species Archetype 2, present in the central and southern Aegean, is dominated by sensitive and indifferent species and responds negatively to chlorophyll a, whereas Species Archetype 3 represents mostly tolerant and opportunistic polychaetes with increased probability of occurrence in eutrophic

  12. Molecular identification of polydorid polychaetes (Annelida ...

    African Journals Online (AJOL)

    The early detection and correct identification of polydorid polychaete species is essential as they are often encountered as invasive alien pests in aquaculture facilities or the intertidal where they may modify the ecosystem. Accurate identification is, however, often hampered by high levels of morphological similarity among ...

  13. First records of polychaetes new to Egyptian Mediterranean waters

    Directory of Open Access Journals (Sweden)

    Manal Mohamed Atta

    2013-02-01

    Full Text Available Nineteen benthic polychaete species were recorded for the first time inthe intertidal zone of the Alexandria coast, south-eastern Mediterranean Sea. They belong toSyllidae (7 species, Hesionidae (3 species, Serpulidae (2 species and7 other families (one species each. Of these species Eunice miurai Carrera-Parra& Salazar-Vallejo 1998 appears to be new to the Mediterranean Sea,while four of the alien species earlier recorded in the Mediterranean were found for thefirst time in Egyptian waters: Opisthosyllis brunnea Langerhans 1879,Loimia medusa Savigny 1822, Syllis schulzi Hartmann-Schröder1960, Phyllodoce longifrons Ben-Eliahu 1972.     The newly recorded species demonstrated markedly different patterns offrequency of occurrence and numerical abundance. Spirobranchus triqueterLinnaeus 1758, S. schulzi, L. medusa and Salvatoria clavataClaparède 1863 were permanent and abundant species in fouling samples along the Alexandria coast.Saccocirrus papillocercus Bobretzky 1872 persisted in the sediments at two sites,with a much higher count at the stressed one, while Protodrilussp. inhabited sediments at two other sites throughout the year, sometimes invery high numbers. In addition, the alien species found earlier, Braniaarminii Langerhans 1881, Odontosyllis fulgurans Audouin &Milne-Edwards 1833 and O. brunnea Langerhans 1879, were frequentlyobserved along the Alexandria coast.

  14. Benthic Cover

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic cover (habitat) maps are derived from aerial imagery, underwater photos, acoustic surveys, and data gathered from sediment samples. Shallow to moderate-depth...

  15. Biotransformation of polycyclic aromatic hydrocarbons in marine polychaetes

    DEFF Research Database (Denmark)

    Jørgensen, Anne; Giessing, Anders; Rasmussen, Lene Juel

    2008-01-01

    Deposit-feeding polychaetes constitute the dominant macrofauna in marine environments that tend to be depositional centers for organic matter and contaminants. Polychaetes are known to accumulate polycyclic aromatic hydrocarbons (PAHs) from both particulate and dissolved phases but less is known...... about the mechanisms underlying elimination of accumulated PAHs. An important pathway of elimination is through biotransformation which results in increased aqueous solubility of the otherwise hydrophobic PAHs. Biotransformation in marine polychaetes proceeds in a two phased process similar to those...... well studied in vertebrates, phase I enzymes belonging to the Cytochrome P450 (CYP) enzyme family, along with a few phase II enzymes have been identified in marine polychaetes. In this review we aim at highlighting advances in the mechanistic understanding of PAH biotransformation in marine polychaetes...

  16. [Spawning and early ontogenesis of the littoral polychaete Namanereis littoralis (Grube, 1876) (Nereididae, Namanereidinae)].

    Science.gov (United States)

    Ezhova, E E

    2011-01-01

    For the first time, under laboratory conditions, development of the polychaete Namanereis littoralis (Grube, 1876) is investigated. Under conditions of the Sea of Japan, its reproduction occurs in July and is confined to the season of monsoon rains. Fertilization is external. Spawning manifests no epitocous transformations. Fecundity is low, ovicells are rich in yolk, and development is nonpelagic, lecithotrophic, embryonized, characterized by a high rate--5-8 days--and occurs in mucous clutches up to hatching of benthic juveniles. Temperature and salinity optima of development are 22-27 degrees C and 16-21 per thousand, respectively, characterizing the species as subtropical brackish-water by its origin. Archaic and specialized traits are noted in the early ontogenesis of N. littoralis.

  17. Population and reproductive dynamics of the polychaete Pygospio elegans in a boreal estuary complex

    DEFF Research Database (Denmark)

    Thonig, Anne; Knott, K Emily; Kesäniemi, Jenni E

    2016-01-01

    Pygospio elegans is an opportunistic, wide-spread spionid polychaete that reproduces asexually via fragmentation and can produce benthic and pelagic larvae, hence combining different developmental modes in one species. We documented the density, size distribution, and reproductive activity of P....... elegans at four sites in the Danish Isefjord-Roskilde Fjord estuary complex, where all modes of reproduction were reported. We compared population dynamics of this species to environmental parameters such as salinity, temperature, and sediment characteristics (grain size, sorting, porosity, water content......, organic content, C/N). We observed that new cohorts—resulting either from sexual or asexual reproduction—appeared in spring and fall, and old ones disappeared in late summer and winter. Sexual reproduction occurred from September until May, and although their timing was variable, there were two...

  18. Seasonal population dynamics of the invasive polychaete genus Marenzelleria spp. in contrasting soft-sediment habitats

    Science.gov (United States)

    Kauppi, L.; Norkko, A.; Norkko, J.

    2018-01-01

    Three species of the invasive polychaete genus Marenzelleria are among the dominant benthic taxa in many, especially deeper, areas in the Baltic Sea. The population dynamics of the polychaetes in the Baltic are, however, still largely unknown. We conducted monthly samplings of the benthic communities and environmental parameters at five sites with differing depths and sediment characteristics in the northern Baltic Sea (59°50.896‧, 23°15.092‧) to study the population dynamics, productivity and growth of Marenzelleria spp. from April 2013 to June 2014. The species of Marenzelleria occurring at the study sites were identified by genetic analyses. At the deepest site (33 m) only M. arctia was present, while all three species were found at the shallower, muddy sites (up to 20 m depth). At the shallow (6 m) sandy site only M. viridis and M. neglecta occurred. The sites differed in the seasonal dynamics of the Marenzelleria spp. population, reflecting the different species identities. The muddy sites up to 20 m depth showed clear seasonal dynamics, with the population practically disappearing by winter, whereas more stable populations occurred at the deepest site and at the sandy site. The highest density, biomass and production were observed at the 20 m deep, organic-rich muddy site where all three species recruited. The seasonally very high densities are likely to have important consequences for organic matter processing, and species interactions at these sites. The observed high productivity of the populations has possibly facilitated their establishment, and considerably increased secondary production in especially the deeper areas.

  19. Density-dependent growth of the polychaete Diopatra aciculata

    Directory of Open Access Journals (Sweden)

    Milada Safarik

    2006-12-01

    Full Text Available Effects of intraspecific density on growth of the tube-building polychaete Diopatra aciculata (Onuphidae were examined over a three-month period within a marine worm aquaculture facility. Three polychaete densities (500, 1000 and 2000 worms/m2 were represented within triplicate 0.30 m2 boxes containing late juvenile D. aciculata, sandy sediment and recirculating seawater. Daily food ration per worm was held constant across all density levels. Total length, weight and number of segments were recorded for 20 polychaetes randomly removed from each of nine treatment boxes at weeks 1, 7 and 14. Mean daily growth was higher during weeks 1-7 than during weeks 7-14 for all growth variables at each density level. Polychaetes at the highest density level exhibited lower rates of growth and more broken and/or regenerating posterior segments than those at low density. High D. aciculata density was also associated with reduced dissolved oxygen concentrations and high polychaete mortality (20%. At medium polychaete density (1000/m2, D. aciculata exhibited low levels of apparent stress and high biomass return per unit area, both of which are important considerations in the aquaculture rearing of this species. We suggest that further studies focus on age- and size-related factors contributing to density effects on polychaete growth.

  20. Changes in seagrass polychaete assemblages after invasion by Caulerpa racemosa var. cylindracea (Chlorophyta: Caulerpales: community structure, trophic guilds and taxonomic distinctness

    Directory of Open Access Journals (Sweden)

    Antonio Box

    2010-06-01

    Full Text Available A two-year study focusing on the associated polychaete assemblages revealed that the degradation of the Posidonia oceanica seagrass meadows, together with the colonisation of rhizomes by invasive Caulerpa racemosa in the Balearic Islands, have produced important changes in the ecosystem functioning, and have therefore affected the benthic faunal communities. The highest abundance and number of species occurred in C. racemosa from August to December. The species composition of the polychaete assemblage in C. racemosa is similar to that of P. oceanica but abundances of shared species differ between Caulerpa and Posidonia. Abundance, number of species and diversity were positively correlated with C. racemosa biomass. The spatial complexity provided by the network of C. racemosa fronds and stolons seemed to combine with that of the remaining seagrass mat to support a well developed polychaete assemblage. Although invaded meadows harboured significantly modified polychaete assemblages when compared with living P. oceanica meadows, the main impacts seem to be non-harmful (i.e. increased abundance and number of species and mainly affect their seasonal patterns, which is a direct consequence of the corresponding biomass seasonality of C. racemosa.

  1. Bioaccumulation of heavy metals by the flora and benthic macrofauna of the Bouregreg estuary wetland

    Directory of Open Access Journals (Sweden)

    Khamar M.

    2018-01-01

    Full Text Available Estuarine systems account for a high proportion of wetlands in Morocco due to the development of the river system. These estuarine and coastal Moroccan environments are as rich in fauna and flora as their European equivalents and present much originality. However, these coastal areas are generally highly urbanized and industrialized, and therefore subject to domestic and industrial discharges. The Bouregreg Estuary represents a good example of this situation, in view of this pollution (organic, chemical and biological and the absence of fresh water supply upstream of the estuary after the dam was built, is increasingly unable of restoring the equilibrium of this ecosystem. This tide can instead ensure the polluting discharge downstream or upstream. Metallic contamination affects the different compartments of the estuarine ecosystem (sediment, water and benthic species (fauna and flora. The objective of this study is to assess the accumulation and bioaccumulation of five heavy metals (Cu, Fe, Zn, Cr and Pb at the sediment level of two dominant plant species (Artiplex portulacoides and Sarcocornia fructicosa and three species of benthic macrofauna (Scrobicularia plana, Venerupis decussata and Hediste diversicolor from the wetland of this estuary. This work will enable us to clearly understand the nutritional relationships between plant, animal, water and sediment species. The results of the analysis revealed that bioaccumulation varies from one species to another and from one metal to another. Thus, the levels of Lead and Chromium at Sarcocornia fructicosa are higher than those found at Artiplex portulacoides. Nevertheless, the latter accumulates better the other metals: Cu, Zn and Fe. While, the macrofauna shows a fairly large variation depending on the life style and sensitivity of species. Thus, Hediste diversicolor showed high levels of the various metals analyzed compared to Scrobicularia plana and Venerupis decussata.

  2. Assessment of Heavy Metal Pollution in Sediment and Polychaete ...

    African Journals Online (AJOL)

    HEAVY METAL POLLUTION & POLYCHAETE WORMS FROM MZINGA CREEK & RAS DEGE MANGROVE ECOSYSTEM. 125 ... metal pollution. The concentration of metals in the geochemically available sediment fraction (easily reducible and oxidisable phases) is analysed to assess the ..... River inputs to the ocean.

  3. Contaminated Marine Sediments As a Source of Cesium Radioisotopes for Benthic Fauna near Fukushima.

    Science.gov (United States)

    Wang, Cuiyu; Baumann, Zofia; Madigan, Daniel J; Fisher, Nicholas S

    2016-10-04

    Marine animals, seawater, and sediment near Fukushima, Japan have become contaminated with 134 Cs and 137 Cs released in March 2011 from the damaged Fukushima Dai-ichi nuclear power plant. Radiocesium concentrations in some benthic fauna declined more slowly than in pelagic fish in the same region. We tested the hypothesis that benthic fish remained more contaminated due to the bioavailability of radiocesium in sediments. Laboratory experiments demonstrated that the assimilation efficiency of 137 Cs was 16% in polychaetes ingesting Fukushima sediment, up to 55% in crabs ingesting polychaetes, and about 80% in fish ingesting worms. In addition, all animals acquired Cs directly from the aqueous phase, but this accounted for only 1.2-2.5% of their total body burden. Thus, diet accounted for nearly all of the total body burden of Cs in these animals. Rate constants of Cs loss from animal tissues were 20% d -1 for polychaetes, 10% d -1 for crabs, and 6% d -1 for fish after acquisition of Cs from water; rate constants following dietary uptake were 45% d -1 , 14% d -1 , and 5% d -1 for polychaetes, crabs, and fish, respectively. A bioaccumulation model indicated that the transfer factors of Cs from sediments and the trophic transfer factors from worms to predators were about 1. Overall, sediment-bound Cs is sufficiently bioavailable to deposit-feeding polychaetes, and macrofauna assimilate Cs from these polychaetes to account for >90% of their body burden. This helps to explain the longer retention of Cs in bottom-dwelling fish near Fukushima.

  4. Polychaete species (Annelida) described from the Philippine and China Seas.

    Science.gov (United States)

    Salazar-Vallejo, Sergio I; Carrera-Parra, Luis F; Muir, Alexander I; De León-González, Jesús Angel; Piotrowski, Christina; Sato, Masanori

    2014-07-30

    The South China and Philippine Seas are among the most diverse regions in the Western Pacific. Although there are several local polychaete checklists available, there is none comprising the whole of this region. Presented herein is a comprehensive list of the original names of all polychaete species described from the region. The list contains 1037 species, 345 genera and 60 families; the type locality, type depository, and information regarding synonymy are presented for each species. 

  5. Restoration of deep-sea macrofauna after simulated benthic disturbance in the Central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Ingole, B.S.; Pavithran, S.; Ansari, Z.A.

    and expensive mining technology, it could be a reality in future. Mining activities in the deep-sea are expected to introduce a new set of environmental conditions to the benthic communities of the oceanic basin (Borowski, 2001). The possible effects... due to the augmented food material. Hence, the decrease in polychaete density immediately after the disturbance is largely attributed to the heavy sedimentation (Tkatchenko and Radziejewska, 1998) and exposure of burrowing fauna to the predatory...

  6. Effects of the invasive polychaete, Marenzelleria viridis, on the fate of sediment associated pollutants – a microcosm study with 14C-labelled pyrene

    DEFF Research Database (Denmark)

    Banta, Gary Thomas; Hedman, Jenny Elisabet

    on the fate of deeply buried sediment-associated pollutants in the historically polluted Baltic Sea. We report here the results of an experimental microcosm study examining the fate of 14C radiolabelled pyrene (a 4-ring PAH) in sediment microcosms with and without Marenzelleria viridis. We also investigated......The deep burrowing, invasive spionid polychaete, Marenzelleria spp. (3 sibling species), is rapidly expanding its range in the Baltic Sea ecosystem, increasing the depth of the bioturbated zone dramatically relative to the native benthic community. One concern is the effect of this invasion...

  7. Transcriptome and quantitative proteome analysis reveals molecular processes associated with larval metamorphosis in the polychaete pseudopolydora vexillosa

    KAUST Repository

    Chandramouli, Kondethimmanahalli

    2013-03-01

    Larval growth of the polychaete worm Pseudopolydora vexillosa involves the formation of segment-specific structures. When larvae attain competency to settle, they discard swimming chaetae and secrete mucus. The larvae build tubes around themselves and metamorphose into benthic juveniles. Understanding the molecular processes, which regulate this complex and unique transition, remains a major challenge because of the limited molecular information available. To improve this situation, we conducted high-throughput RNA sequencing and quantitative proteome analysis of the larval stages of P. vexillosa. Based on gene ontology (GO) analysis, transcripts related to cellular and metabolic processes, binding, and catalytic activities were highly represented during larval-adult transition. Mitogen-activated protein kinase (MAPK), calcium-signaling, Wnt/β-catenin, and notch signaling metabolic pathways were enriched in transcriptome data. Quantitative proteomics identified 107 differentially expressed proteins in three distinct larval stages. Fourteen and 53 proteins exhibited specific differential expression during competency and metamorphosis, respectively. Dramatic up-regulation of proteins involved in signaling, metabolism, and cytoskeleton functions were found during the larval-juvenile transition. Several proteins involved in cell signaling, cytoskeleton and metabolism were up-regulated, whereas proteins related to transcription and oxidative phosphorylation were down-regulated during competency. The integration of high-throughput RNA sequencing and quantitative proteomics allowed a global scale analysis of larval transcripts/proteins associated molecular processes in the metamorphosis of polychaete worms. Further, transcriptomic and proteomic insights provide a new direction to understand the fundamental mechanisms that regulate larval metamorphosis in polychaetes. © 2013 American Chemical Society.

  8. On some Polychaetous Annelids from Curaçao

    NARCIS (Netherlands)

    Horst, R.

    1922-01-01

    Though we know already a rather large number of Polychaetous Annelids from the Caribbean Sea, hitherto, as far as I know, no Annelids have been described from the coast of the island Curaçao and I therefore was very glad, that my colleague Dr. VAN DER HORST kindly placed in my hands for

  9. Population structure and growth of polydorid polychaetes that infest ...

    African Journals Online (AJOL)

    Polydorid polychaetes can infest cultured abalone thereby reducing productivity. In order to effectively control these pests, their reproductive biology must be understood. The population dynamics and reproduction of polydorids infesting abalone Haliotis midae from two farms in South Africa is described using a ...

  10. Spionid polychaetes infesting cultured abalone Haliotis midae in ...

    African Journals Online (AJOL)

    CA Simon, A Ludford, S Wynne. Abstract. A study was conducted to identify and quantify the spionid polychaetes that infest cultured abalone Haliotis midae at aquaculture facilities on the west (Farm A), south (Farms B and C) and ... The abalone were infested by Dipolydora capensis, Polydora hoplura and a Boccardia sp.

  11. Neurogenesis suggests independent evolution of opercula in serpulid polychaetes

    Directory of Open Access Journals (Sweden)

    Wanninger Andreas

    2009-11-01

    Full Text Available Abstract Background The internal phylogenetic relationships of Annelida, one of the key lophotrochozoan lineages, are still heavily debated. Recent molecular analyses suggest that morphologically distinct groups, such as the polychaetes, are paraphyletic assemblages, thus questioning the homology of a number of polychaete morphological characters. Serpulid polychaetes are typically recognized by having fused anterior ends bearing a tentacular crown and an operculum. The latter is commonly viewed as a modified tentacle (= radiole and is often used as an important diagnostic character in serpulid systematics. Results By reconstructing the developmental neuroanatomy of the serpulid polychaete Spirorbis cf. spirorbis (Spirorbinae, we found striking differences in the overall neural architecture, the innervation pattern, and the ontogenetic establishment of the nervous supply of the operculum and the radioles in this species. Accordingly, the spirorbin operculum might not be homologous to the radioles or to the opercula of other serpulid taxa such as Serpula and Pomatoceros and is thus probably not a part of the tentacular crown. Conclusion We demonstrate that common morphological traits such as the prostomial appendages may have evolved independently in respective serpulid sublineages and therefore require reassessment before being used in phylogenetic analyses. Our findings corroborate recent molecular studies that argue for a revision of serpulid systematics. In addition, our data on Spirorbis neurogenesis provide a novel set of characters that highlight the developmental plasticity of the segmented annelid nervous system.

  12. Assessment of Heavy Metal Pollution in Sediment and Polychaete ...

    African Journals Online (AJOL)

    Metal pollution in the Mzinga creek mangrove stand was assessed and compared with a relatively pristine mangrove forest at Ras Dege in Dar es Salaam. The concentrations of cadmium, chromium, copper, lead and zinc in sediment and polychaete worms (Capitella sp.) were analyzed by ICP-AES and mercury was ...

  13. Indicators: Benthic Macroinvertebrates

    Science.gov (United States)

    Benthic (meaning “bottom-dwelling”) macroinvertebrates are small aquatic animals and the aquatic larval stages of insects. Benthic macroinvertebrates are commonly used as indicators of the biological condition of waterbodies.

  14. Abundance and composition of benthic fauna in Penaeus monodon Fabricius culture pond on the west coast of Malaysia peninsular

    OpenAIRE

    Abu Hena, M.K.; Hishamuddin, O.; Misri, K.

    2006-01-01

    This paper reports a study on the benthic faunal abundance and diversity of tiger shrimp P. monodon culture ponds in Perak, west coast of Malaysia Peninsular. Sampling was carried out at three weeks interval throughout the 116 days culture period. In addition, water temperature, dissolved oxygen, salinity, transparency, pH and organic matter of soil were also measured. Results showed that the major groups of macro-benthos comprised of gastropod, foraminifera, polychaetes, bivalve and insects;...

  15. Neurogenesis suggests independent evolution of opercula in serpulid polychaetes

    DEFF Research Database (Denmark)

    Brinkmann, Nora; Wanninger, Andreas

    2009-01-01

    BACKGROUND: The internal phylogenetic relationships of Annelida, one of the key lophotrochozoan lineages, are still heavily debated. Recent molecular analyses suggest that morphologically distinct groups, such as the polychaetes, are paraphyletic assemblages, thus questioning the homology...... systematics. RESULTS: By reconstructing the developmental neuroanatomy of the serpulid polychaete Spirorbis cf. spirorbis (Spirorbinae), we found striking differences in the overall neural architecture, the innervation pattern, and the ontogenetic establishment of the nervous supply of the operculum...... such as the prostomial appendages may have evolved independently in respective serpulid sublineages and therefore require reassessment before being used in phylogenetic analyses. Our findings corroborate recent molecular studies that argue for a revision of serpulid systematics. In addition, our data on Spirorbis...

  16. Polychaetes of Greece: an updated and annotated checklist

    Science.gov (United States)

    Simboura, Nomiki; Katsiaras, Nikolaos; Chatzigeorgiou, Giorgos; Arvanitidis, Christos

    2017-01-01

    Abstract Background The last annotated checklist of marine polychaetes in Greece was published in 2001. Since then, global taxonomic progress, combined with many new species records for Greece, required a thorough review of the taxonomic, nomenclatural and biogeographic status of the national species list. This checklist revises the status of all extant polychaete species reported from the Greek Exclusive Economic Zone since 1832. The work was undertaken as part of the efforts on compiling a national species inventory (Greek Taxon Information System initiative) in the framework of the LifeWatchGreece Research Infrastructure. New information This checklist comprises an updated and annotated inventory of polychaete species in Greek waters, compiled from literature reports, online databases, museum collections and unpublished datasets. The list provides information on 836 species-level taxa from Greece, of which 142 are considered questionable. An additional 84 species reported in the past are currently considered absent from Greece; reasons for the exclusion of each species are given. Fourteen species are reported here for the first time from Greek waters. At least 52 species in the present list constitute in fact a complex of cryptic or pseudo-cryptic species. Forty-seven species are considered non-native to the area. In addition to the species-level taxa reported in this checklist, eleven genera have been recorded from Greece with no representatives identified to species level. One replacement name is introduced. For each species, a comprehensive bibliographic list of occurrence records in Greece and the synonyms used in these publications are provided as supplementary material. Where necessary, the taxonomic, nomenclatural or biogeographic status is discussed. Finally, the findings are discussed in the wider context of Mediterranean polychaete biogeography, taxonomic practice and worldwide research progress. PMID:29362552

  17. Trace metals partitioning among different sedimentary mineral phases and the deposit-feeding polychaete Armandia brevis

    Energy Technology Data Exchange (ETDEWEB)

    Díaz-de-Alba, Margarita [Department of Analytical Chemistry, Institute of Biomolecules (INBIO), Faculty of Sciences, CEI-MAR, University of Cadiz, Campus Rio S. Pedro, E-11510, Puerto Real, Cadiz (Spain); Huerta-Diaz, Miguel Angel, E-mail: huertam@uabc.edu.mx [Instituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, Campus Ensenada, Km. 103 Carr. Tijuana-Ensenada, Ensenada 22800, Baja California (Mexico); Delgadillo-Hinojosa, Francisco [Instituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, Campus Ensenada, Km. 103 Carr. Tijuana-Ensenada, Ensenada 22800, Baja California (Mexico); Hare, Landis [Centre Eau Terre Environnement, 490, rue de la Couronne, Québec, Québec G1K 9A9 (Canada); Galindo-Riaño, M. Dolores [Department of Analytical Chemistry, Institute of Biomolecules (INBIO), Faculty of Sciences, CEI-MAR, University of Cadiz, Campus Rio S. Pedro, E-11510, Puerto Real, Cadiz (Spain); Siqueiros-Valencia, Arturo [Instituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, Campus Ensenada, Km. 103 Carr. Tijuana-Ensenada, Ensenada 22800, Baja California (Mexico)

    2016-02-01

    Trace metals (Cd, Co, Cu, Fe, Mn, Ni, Pb, Zn) were determined in two operationally defined fractions (HCl and pyrite) in sediments from Ensenada and El Sauzal harbors (Mexico). The HCl fraction had significantly higher metal concentrations relative to the pyrite fraction in both harbors, underlining the weak tendency of most trace metals to associate with pyrite. Exceptionally, Cu was highly pyritized, with degrees of trace metal pyritization (DTMP) > 80% in both harbors. Dissolved Fe flux measurements combined with solid phase Fe sulfide data indicated that 98 mt of Fe are precipitated as iron sulfides every year in Ensenada Harbor. These Fe sulfides (and associated trace metals) will remain preserved in the sediments, unless they are perturbed by dredging or sediment resuspension. Calculations indicate that dredging activities could export to the open ocean 0.20 ± 0.13 to (0.30 ± 0.56) × 10{sup 3} mt of Cd and Cu, respectively, creating a potential threat to marine benthic organisms. Degrees of pyritization (DOP) values in Ensenada and El Sauzal harbors were relatively low (< 25%) while degrees of sulfidization (DOS) were high (~ 50%) because of the contribution of acid volatile sulfide. DOP values correlated with DTMP values (p ≤ 0.001), indicating that metals are gradually incorporated into pyrite as this mineral is formed. Significant correlations were also found between DTMP values and − log(K{sub sp(MeS)}/K{sub sp(pyr)}) for both harbors, indicating that incorporation of trace metals into the pyrite phase is a function of the solubility product of the corresponding metal sulfide. The order in which elements were pyritized in both harbors was Zn ≈ Mn < Fe < Cd ≈ Pb < Ni ≈ Co < < Cu. Lastly, a strong correlation (r{sup 2} = 0.87, p < 0.01) was found between average reactive trace metal concentrations and metal concentrations measured in Armandia brevis (a deposit-feeding Opheliid polychaete), suggesting that these labile sedimentary metals are

  18. Mineralization of Alvinella polychaete tubes at hydrothermal vents.

    Science.gov (United States)

    Georgieva, M N; Little, C T S; Ball, A D; Glover, A G

    2015-03-01

    Alvinellid polychaete worms form multilayered organic tubes in the hottest and most rapidly growing areas of deep-sea hydrothermal vent chimneys. Over short periods of time, these tubes can become entirely mineralized within this environment. Documenting the nature of this process in terms of the stages of mineralization, as well as the mineral textures and end products that result, is essential for our understanding of the fossilization of polychaetes at hydrothermal vents. Here, we report in detail the full mineralization of Alvinella spp. tubes collected from the East Pacific Rise, determined through the use of a wide range of imaging and analytical techniques. We propose a new model for tube mineralization, whereby mineralization begins as templating of tube layer and sublayer surfaces and results in fully mineralized tubes comprised of multiple concentric, colloform, pyrite bands. Silica appeared to preserve organic tube layers in some samples. Fine-scale features such as protein fibres, extracellular polymeric substances and two types of filamentous microbial colonies were also found to be well preserved within a subset of the tubes. The fully mineralized Alvinella spp. tubes do not closely resemble known ancient hydrothermal vent tube fossils, corroborating molecular evidence suggesting that the alvinellids are a relatively recent polychaete lineage. We also compare pyrite and silica preservation of organic tissues within hydrothermal vents to soft tissue preservation in sediments and hot springs. © 2014 The Authors. Geobiology Published by John Wiley & Sons Ltd.

  19. Toxicity evaluation of benzo[a]pyrene on the polychaete Perinereis nuntia using subtractive cDNA libraries.

    Science.gov (United States)

    Zheng, Senlin; Qiu, Xiaoyan; Chen, Bin; Yu, Xingguang; Lin, Kangli; Bian, Mei; Liu, Zhenghua; Huang, Hao; Yu, Weiwei

    2011-10-01

    To gain insight into the toxic effects of the carcinogenic PAH benzo[a]pyrene (BaP) on the typical marine benthic polychaete Perinereis nuntia, we amplified and sequenced genes by creating subtractive cDNA libraries between worms exposed to BaP and solvent control. We assigned functions to the identified sequences and further analyzed the transcriptional profile changes of a set of 50 selected potential marker genes using quantitative real time PCR. A total of 2422 new high quality ESTs (GenBank accession number GT629654-GT632075) were obtained in the P. nuntia subtracted cDNA libraries, and assembled into 1594 unique sequences. Blastx results showed 700 of the unique sequences shared high similarity with existing genes in the GenBank nr database. Functional annotation of these enriched gene segments suggested that P. nuntia shows a wide range of toxicological responses to BaP. Comparison of the transcriptional profiles of the 50 potential marker genes in worms exposed to BaP and the control suggested that BaP significantly changed the expression of genes involved in xenobiotics metabolism, reactive oxygen species (ROS) elimination, DNA repair, apoptosis, cell division cycle, neurodegeneration, neurotransmitter metabolism and carcinogenesis. It also shows that there are significant correlations between these potential marker genes. The results support the prediction that the polychaete P. nuntia also has a set of tumor-related genes, while other responses influenced by BaP involve detoxification, antioxidation, DNA repair and apoptosis. Copyright © 2011 Elsevier B.V. All rights reserved.

  20. Some intertidal and shallow water polychaetes of the Caribbean coast of Costa Rica.

    Science.gov (United States)

    Dean, Harlan K

    2017-03-01

    The polychaete fauna of the Caribbean coast of Costa Rica has been inadequately characterized with only nine species previously reported. Collections of polychaetes from intertidal coralline rocks and several shallow sub-tidal sites on the Caribbean coast of Costa Rica have been examined and 68 species were identified. Of these, 66 are new records for Costa Rica.

  1. Representative benthic bioindicator organisms for use in radiation effects research: Culture of Neanthes arenaceodentata (Polychaeta)

    International Nuclear Information System (INIS)

    Harrison, F.L.; Knezovich, J.P.; Martinelli, R.E.

    1992-09-01

    The purpose of this document is to present a comprehensive synthesis of information pertaining to the selection and maintenance of bioindicator organisms for use in radiation-effects research. The focus of this report is on the benthic polychaete, Neanthes arenaceodentata, a species that has been used successfully at the Lawrence Livermore National Laboratory (LLNL) and other institutions to define the impacts of radiation and chemical toxicants on aquatic organisms. In this document, the authors provide a rationale for the selection of this organism, a description of its reproductive biology, and a description of the conditions that are required for the maintenance and rearing of the organism for use in toxicological research

  2. Estuarine-scale genetic variation in the polychaete hobsonia Florida (ampharetidae; annelida) in long island sound and relationships to pleistocene glaciations.

    Science.gov (United States)

    Olson, Mary Ann; Zajac, Roman N; Russello, Michael A

    2009-08-01

    Modern patterns of genetic variation in northern estuarine species are likely shaped by both historical and contemporary processes. Many studies have demonstrated the predominant roles of Pleistocene glaciations, life-history traits, or a combination of both in shaping patterns of population differentiation across a broad range of animal species, yet comparatively few have investigated such questions in benthic invertebrates. We examined fine-scale patterns of genetic differentiation among populations in the ampharetid polychaete Hobsonia florida in Long Island Sound (LIS) relative to its life-history traits and the geologic history of the region. Mitochondrial DNA sequencing of cytochrome oxidase I (COI) revealed 15 unique haplotypes among four populations in LIS and two outgroups. Populations in LIS exhibited the greatest haplotypic diversity compared to outgroup populations. Analysis of molecular variance revealed a highly significant level of genetic heterogeneity (P mixing, further mediated by low dispersal and specialized habitat requirements.

  3. The Effect of Variation in Developmental Mode on the Population Dynamics of a Spionid Polychaete (Pygospio elegans) in a Heterogeneous Environment

    DEFF Research Database (Denmark)

    Thonig, Anne

    by the short life span of P. elegans and sweepstakes reproductive success. Additionally, stochastic events, such as rain storms, can lead to abrupt drops in salinity which can be detrimental for P. elegans and hence introduce further changes in population structure. Seasonal dynamics, including sexual...... reproduction, were correlated with temperature, whereas spatial differences in density, size and reproductive activity of P. elegans as well as species diversity of the benthic invertebrate community, were related to sediment structure. A positive correlation between species and allelic richness of P. elegans......The effect of variation in developmental mode on the population dynamics of a spionid polychaete (Pygospio elegans) in a heterogeneous environment. Yhteenveto: Kehitysmuotojen variaatio ja sen vaikutus Pygospio elegans - monisukasmadon populaatiodynamiikkaan heterogeenisessä ympäristössä. Oversigt...

  4. Comparison of the life cycles of two populations of the polychaete Pereinereis cf. cultrifera from the Bay of Algiers (Mediterranean Sea

    Directory of Open Access Journals (Sweden)

    Leila Rouabah

    2008-12-01

    Full Text Available The benthic phases of the life cycles of two populations of the polychaete Pereinereis cultrifera from the Bay of Algiers were investigated using field surveys. We found no differences in the life cycle of the two populations. In the Bay of Algiers, P. cultrifera reproduces without epitokal modifications. The lifespan of the species probably does not exceed two years. The reproductive period spans most of the year but is more intense in spring from March to May when the sea-water temperature starts rising. A few mature individuals were collected at the end of summer and in winter. The oocytes take 9 to 12 months to mature and their diameter at maturity is approximately 200 µm.

  5. Seasonal genetic variation associated with population dynamics of a poecilogonous polychaete worm

    DEFF Research Database (Denmark)

    Thonig, Anne; Banta, Gary Thomas; Hansen, Benni Winding

    2017-01-01

    Poecilogonous species show variation in developmental mode, with larvae that differ both morphologically and ecologically. The spionid polychaete Pygospio elegans shows variation in developmental mode not only between populations, but also seasonally within populations. We investigated the conseq...

  6. Ordovician eunicid polychaetes of Estonia and surrounding areas: review of their distribution and diversification.

    Science.gov (United States)

    Hints, O

    2000-12-01

    Scolecodonts, the jaws of polychaete worms, are common and diverse palynomorphs in the Ordovician rocks of Estonia and surrounding areas. Some 120 apparatus-based species representing about 40 genera have been recorded thus far. Relatively long stratigraphical ranges of the majority of species reflect a low rate of evolution of jawed polychaetes. However, some individual species, as well as structural changes in the assemblages, appear to be useful for stratigraphical purposes. Environmental events like those in the middle Caradoc and late Ashgill had some impact on polychaete faunas, but less than on several other groups. In order to study the spatial distribution of eunicids, faunas of particular intervals of the Ordovician were investigated. Quantitative analysis revealed that polychaete assemblages with a very consistent qualitative and quantitative composition were widespread over long distances within the belts of similar facies conditions in the Baltoscandian Palaeobasin. On the other hand, it appears that species of Ordovician jawed polychaetes were strongly influenced by particular facies, and accordingly well differentiated along the palaeobasin gradient. The decrease in diversity and abundance towards the deeper-water part of the palaeobasin indicates that the majority of Ordovician eunicids preferred relatively shallow-water conditions. The increase in differentiation of environments is accompanied by an increase in differentiation of polychaete assemblages.

  7. Diversity and spatial distribution patterns of polychaete assemblages in the Paso Ancho, Straits of Magellan Chile

    Science.gov (United States)

    Montiel, Américo; Quiroga, Eduardo; Gerdes, Dieter

    2011-03-01

    The polychaete fauna of the Paso Ancho Basin in the Straits of Magellan was studied by means of three different sampling gears: a multibox corer, an Agassiz trawl, and a Rauschert dredge. A total of 1743 polychaete specimens belonging to 166 species from 36 families were collected at 10 stations. Significant differences were found between the catches of the three gears in terms of species numbers. The multibox corer brought up 63% of all species caught, especially macroinfauna polychaetes, the Rauschert dredge caught 16%, mostly small-bodied macroepifauna species and the Agassiz Trawl brought up 6% of the total species, largely mega-epifauna polychaetes. Only 15% of the total species occurred in more than one of the gears and only one species was found parallel in all three gears thus indicating that the combination of these gears allowed a better description of the polychaete communities than possible by just one of the gears. Using the Abundance-based Coverage Estimator and combining all species from the three different gears led to an asymptotic value of the species accumulation curve of 223 species for the Paso Ancho. Non-metric multidimensional scaling based on presence/absence data distinguished between shallow (120 m) polychaete assemblages. The shallow assemblage showed higher species richness values than the deep assemblage, and the taxonomical composition, too, differed considerably between both assemblages.

  8. Adaptation of benthic invertebrates to food sources along marine-terrestrial boundaries as indicated by carbon and nitrogen stable isotopes

    Science.gov (United States)

    Lange, G.; Haynert, K.; Dinter, T.; Scheu, S.; Kröncke, I.

    2018-01-01

    Frequent environmental changes and abiotic gradients of the Wadden Sea require appropriate adaptations of the local organisms and make it suitable for investigations on functional structure of macrozoobenthic communities from marine to terrestrial boundaries. To investigate community patterns and food use of the macrozoobenthos, a transect of 11 stations was sampled for species number, abundance and stable isotope values (δ13C and δ15N) of macrozoobenthos and for stable isotope values of potential food resources. The transect was located in the back-barrier system of the island of Spiekeroog (southern North Sea, Germany). Our results show that surface and subsurface deposit feeders, such as Peringia ulvae and different oligochaete species, dominated the community, which was poor in species, while species present at the transect stations reached high abundance. The only exception was the upper salt marsh with low abundances but higher species richness because of the presence of specialized semi-terrestrial and terrestrial taxa. The macrozoobenthos relied predominantly on marine resources irrespective of the locality in the intertidal zone, although δ13C values of the consumers decreased from - 14.1 ± 1.6‰ (tidal flats) to - 21.5 ± 2.4‰ (salt marsh). However, the ubiquitous polychaete Hediste diversicolor showed a δ15N enrichment of 2.8‰ (an increase of about one trophic level) from bare sediments to the first vegetated transect station, presumably due to switching from suspension or deposit feeding to predation on smaller invertebrates. Hence, we conclude that changes in feeding mode represent an important mechanism of adaptation to different Wadden Sea habitats.

  9. Free-living marine polychaetes (Annelida) inhabiting hard-bottom substrates in Trinidad and Tobago, West Indies.

    Science.gov (United States)

    Gobin, Judith F

    2010-03-01

    As part of a larger comparative study, marine polychaete hard-bottom assemblages were surveyed using artificial substrate units (ASUs) deployed at four sites off the islands of Trinidad and Tobago. The polychaete fauna was represented by 19 families comprising 89 species. The syllid Exogone dispar was the most abundant polychaete followed closely by the serpulid Pseudovermilia occidentalis. At the family level, the polychaete fauna inhabiting the ASUs is similar to the fauna from other temperate and tropical locations. Omnivorous species were dominant (70%), followed by filter feeders (20%). This survey provides first records of the hard-bottom polychaete fauna of Trinidad and Tobago and adds new information about the geographic range of some polychaete species.

  10. Building a database for long-term monitoring of benthic macrofauna in the Pertuis-Charentais (2004-2014).

    Science.gov (United States)

    Philippe, Anne S; Plumejeaud-Perreau, Christine; Jourde, Jérôme; Pineau, Philippe; Lachaussée, Nicolas; Joyeux, Emmanuel; Corre, Frédéric; Delaporte, Philippe; Bocher, Pierrick

    2017-01-01

    Long-term benthic monitoring is rewarding in terms of science, but labour-intensive, whether in the field, the laboratory, or behind the computer. Building and managing databases require multiple skills, including consistency over time as well as organisation via a systematic approach. Here, we introduce and share our spatially explicit benthic database, comprising 11 years of benthic data. It is the result of intensive benthic sampling that has been conducted on a regular grid (259 stations) covering the intertidal mudflats of the Pertuis-Charentais (Marennes-Oléron Bay and Aiguillon Bay). Samples were taken by foot or by boats during winter depending on tidal height, from December 2003 to February 2014. The present dataset includes abundances and biomass densities of all mollusc species of the study regions and principal polychaetes as well as their length, accessibility to shorebirds, energy content and shell mass when appropriate and available. This database has supported many studies dealing with the spatial distribution of benthic invertebrates and temporal variations in food resources for shorebird species as well as latitudinal comparisons with other databases. In this paper, we introduce our benthos monitoring, share our data, and present a "guide of good practices" for building, cleaning and using it efficiently, providing examples of results with associated R code. The dataset has been formatted into a geo-referenced relational database, using PostgreSQL open-source DBMS. We provide density information, measurements, energy content and accessibility of thirteen bivalve, nine gastropod and two polychaete taxa (a total of 66,620 individuals)​ for 11 consecutive winters. Figures and maps are provided to describe how the dataset was built, cleaned, and how it can be used. This dataset can again support studies concerning spatial and temporal variations in species abundance, interspecific interactions as well as evaluations of the availability of food

  11. Biodiversity in Benthic Ecology

    DEFF Research Database (Denmark)

    Friberg, Nikolai; Carl, J. D.

    Foreword: This proceeding is based on a set of papers presented at the second Nordic Benthological Meeting held in Silkeborg, November 13-14, 1997. The main theme of the meeting was biodiversity in benthic ecology and the majority of contributions touch on this subject. In addition, the proceeding...

  12. Food web flows through a sub-arctic deep-sea benthic community

    Science.gov (United States)

    Gontikaki, E.; van Oevelen, D.; Soetaert, K.; Witte, U.

    2011-11-01

    The benthic food web of the deep Faroe-Shetland Channel (FSC) was modelled by using the linear inverse modelling methodology. The reconstruction of carbon pathways by inverse analysis was based on benthic oxygen uptake rates, biomass data and transfer of labile carbon through the food web as revealed by a pulse-chase experiment. Carbon deposition was estimated at 2.2 mmol C m -2 d -1. Approximately 69% of the deposited carbon was respired by the benthic community with bacteria being responsible for 70% of the total respiration. The major fraction of the labile detritus flux was recycled within the microbial loop leaving merely 2% of the deposited labile phytodetritus available for metazoan consumption. Bacteria assimilated carbon at high efficiency (0.55) but only 24% of bacterial production was grazed by metazoans; the remaining returned to the dissolved organic matter pool due to viral lysis. Refractory detritus was the basal food resource for nematodes covering ∼99% of their carbon requirements. On the contrary, macrofauna seemed to obtain the major part of their metabolic needs from bacteria (49% of macrofaunal consumption). Labile detritus transfer was well-constrained, based on the data from the pulse-chase experiment, but appeared to be of limited importance to the diet of the examined benthic organisms (preferred prey, in this case, was other macrofaunal animals rather than nematodes. Bacteria and detritus contributed 53% and 12% to the total carbon ingestion of carnivorous polychaetes suggesting a high degree of omnivory among higher consumers in the FSC benthic food web. Overall, this study provided a unique insight into the functioning of a deep-sea benthic community and demonstrated how conventional data can be exploited further when combined with state-of-the-art modelling approaches.

  13. Environmental impact of bleufin tuna aquaculture on benthic assemblages in the western coast of Baja California, Mexico

    Science.gov (United States)

    Diaz-Castaneda, V.

    2013-05-01

    Sea-cage farming results in a constant rain of organic waste onto the surrounding benthos. In Baja California there is growing concern over the effects of sea-cages on the local environment: sediment chemistry and benthic communities. Samples were taken in 18 stations using a Van veen grab (0.1 m2) in Bahía Salsipuedes, Baja California in 2003, 2004, 2006 and 2008. Organisms belonging to 7 Phyla were collected: Polychaeta, Mollusca, Crustacea, Echinodermata, Cnidaria, Sipuncula and Bryozoa. Polychaetes were the dominant group followed by crustaceans and mollusks. Polychaetes were represented by 37 families and 157 species. Best represented families were Paraonidae, Cirratulidae, Spionidae, Glyceridae and Maldanidae. This study shows that in the NW area of the bay organic carbon (2.54%) and organic nitrogen (0.95%) are being accumulated (higher concentrations and lower Eh values) and smaller opportunistic species are increasing rapidly near the tuna pens. It is crucial to maintain "healthy" macrofaunal populations in order to enhance decomposition of organic matter and to prevent its excessive accumulation. The most abundant polychaete species were Aphelochaeta multifinis, Mediomastus ambiseta, Prionospio steenstrupi Spiophanes bombyx, Apoprionospio pygnaea, Paraonella sp, Monticellina sp, Aricidea (Allia) ramosa, Spiophanes bombyx and Levinsenia gracilis. The dominant trophic groups were deposit-feeders and carnivores. The buildup of organic matter on the seafloor has attracted scavenger species particularly peracarid crustaceans. Non-metric multidimensional scaling (MDS) separated stations depending of the distance to the tuna pens.

  14. Expression pattern of arenicins - the antimicrobial peptides of polychaete Arenicolamarina

    Directory of Open Access Journals (Sweden)

    Arina L. Maltseva

    2014-12-01

    Full Text Available Immune responses of invertebrate animals are mediated through innate mechanisms, among which production of antimicrobial peptides play an important role. Although evolutionary Polychaetes represent an interesting group closely related to a putative common ancestor of other coelomates, their immune mechanisms still remain scarcely investigated. Previously our group has identified arenicins - new antimicrobial peptides of the lugworm Arenicola marina, since then these peptides were thoroughly characterized in terms of their structure and inhibitory potential. In the present study we addressed the question of the physiological functions of arenicins in the lugworm body. Using molecular and immunocytochemical methods we demonstrated that arencins are expressed in the wide range of the lugworm tissues - coelomocytes, body wall, extravasal tissue and the gut. The expression of arenicins is constitutive and does not depend on stimulation of various infectious stimuli. Most intensively arenicins are produced by mature coelomocytes where they function as killing agents inside the phagolysosome. In the gut and the body wall epithelia arenicins are released from producing cells via secretion as they are found both inside the epithelial cells and in the contents of the cuticle. Collectively our study showed that arenicins are found in different body compartments responsible for providing a first line of defence against infections, which implies their important role as key components of both epithelial and systemic branches of host defence.

  15. The market features of imported non-indigenous polychaetes in Portugal and consequent ecological concerns

    Directory of Open Access Journals (Sweden)

    Pedro Fidalgo e Costa

    2006-12-01

    Full Text Available The importance of the market for polychaetes dramatically increased after the discovery of their potential as food in aquaculture. In Portugal, the gathering of polychaetes solely from natural populations is not sufficient to meet market demand, both as bait for sea anglers and as a food item in aquaculture. The requests for worms to polychaete dealers by Portuguese and Spanish seafarms have increased during recent years. Due to the lack of intensive culture of these worms in Portugal and the proximity of southern Spanish farms, a large component of imported polychaetes that arrive in Portugal at Lisbon Airport go directly to Spain by road. In 2002 and 2003 a total of 12,728,379 and 16,866,839 polychaetes respectively were imported to Europe via Lisbon Airport from China and the USA. In 2003 the imports from China and the USA realised 716,180 and 291,845 US dollars respectively. Two species were reported to have been imported in these years, namely the Korean blue ragworm Perinereis aibuhitensis and the American bloodworm Glycera dibranchiata. Imports of non-indigenous species, which are traded and sold alive, may increase the risk of accidental introduction into the wild. This is of special concern as Perinereis aibuhitensis has been successfully reared in captivity within the range of environmental conditions existing in the Ria Formosa coastal lagoon. Other risks associated with introduced species are the transport of foreign pathogens and other associated non-native organisms, which may act as carriers of disease.

  16. Distribution patterns of shallow water polychaetes (Annelida along the Alexandria coast, Egypt (eastern Mediterranean

    Directory of Open Access Journals (Sweden)

    M. M. DORGHAM

    2014-10-01

    Full Text Available Shallow hard bottom and intertidal soft bottom polychaete assemblages of the Alexandria coast, southeastern Mediterranean (Levantine Sea, were studied during a complete annual cycle in order to analyze spatial temporal patterns of variation in assemblages, and relevant factors related to polychaete distribution. The present study recorded a total of 73 species, belonging to Syllidae (22 species, Nereididae (9 species, Serpulidae (6 species, Eunicidae (5 species and other 19 families. The assemblages experienced pronounced spatial and temporal variation throughout the study area, but spatial variation appeared more important in determining the observed patterns. Polychaete distribution related to variation of grain size and sessile macrobenthos cover suggesting that these structural variables accounted more than the physical-chemical ones (namely BOD, dissolved oxygen, organic carbon, organic matter, salinity, temperature, pH in influencing the patterns of assemblages’ distribution. The present study is the southeastern-most one dealing with ecology and distribution patterns of hard bottom polychaetes from the Mediterranean Sea, as well as one of the few studies dealing with intertidal soft bottom polychaetes in the Levant Basin.

  17. Transfer of hydrophobic contaminants in urban runoff particles to benthic organisms estimated by an in vitro bioaccessibility test

    DEFF Research Database (Denmark)

    Nakajima, F.; Saito, K.; Isozaki, Y.

    2006-01-01

    An in vitro bioaccessibility test was applied for assessing the transfer of polycyclic aromatic hydrocarbons (PAHs) present in road dust, into benthic organisms living in a receiving water body. The road dust is supposed to be urban runoff particles under wet weather conditions. Sodium dodecyl...... concentration in the original dust. The PAH composition in benthic organisms (polychaetes) did not correspond with that of the surrounding sediment and the PAHs detected were also detected in high concentrations in the SDS extract of road dust. When testing the toxicity of the extracted contaminants...... the exposed contaminants than the traditional organic solvent extraction method and the SDS extracted fraction is applicable to toxicity tests reflecting the digestive process....

  18. First record of massive blooming of benthic diatoms and their association with megabenthic filter feeders on the shallow seafloor of an Antarctic Fjord: Does glacier melting fuel the bloom?

    Science.gov (United States)

    Ahn, In-Young; Moon, Hye-Won; Jeon, Misa; Kang, Sung-Ho

    2016-03-01

    We report a conspicuous benthic diatom bloom on an Antarctic fjord shallow seafloor, which has not been reported elsewhere in Antarctica. A thick and massive growth of benthic diatoms was covering or being entangled with a variety of common benthic megafauna such as stalked ascidians, sponges, tubedwelling polychaetes, gastropods, bryozoans, and others. This finding is an outcome of recent investigations on benthic communities in Marian Cove, King George Island, where glacier retreat has been proceeding quickly for the past several decades. Dominance of benthic diatoms during the austral summer has been frequently reported in shallow Antarctic nearshore waters, which in turn indicates their potential as a primary food item for secondary producers living in this harsh environment. However, previous blooming records of the benthic diatoms were primarily based on data from water column samples. We are the first to report observational evidence of shallow seafloor substrates, including the massive blooming of benthic diatoms and their associations with common benthic megafauna in an Antarctic fjord.

  19. Larval neurogenesis in Sabellaria alveolata reveals plasticity in polychaete neural patterning

    DEFF Research Database (Denmark)

    Brinkmann, Nora; Wanninger, Andreas

    2008-01-01

    The investigation of neurogenesis in polychaetes not only facilitates insights into the developmental biology of this group, but also provides new data for phylogenetic analyses. This should eventually lead toward a better understanding of metazoan evolution including key issues such as the ontog......The investigation of neurogenesis in polychaetes not only facilitates insights into the developmental biology of this group, but also provides new data for phylogenetic analyses. This should eventually lead toward a better understanding of metazoan evolution including key issues...... reconstruction software. The overall pattern of neurogenesis in S. alveolata resembles the condition found in other planktonic polychaete trochophores where the larval neural body plan including a serotonergic prototroch nerve ring is directly followed by adult features of the nervous system...

  20. Control of Polychaetes by Dipping Infected Pearl Oyster on Different Salinity

    Directory of Open Access Journals (Sweden)

    Yani Hadiroseyani

    2007-08-01

    Full Text Available Dip treatment on pearl oysters (Pinctada maxima was conducted in different concentrations of saline water to eliminate boring polychaetes. Results shows that polychaetes leave the osyters which treated on saline water at 0 ppt, 45 ppt, and 60 ppt as long as 15 minutes each. It also shows that the oysters got high survival rate 7 days after the treatment. Key words : Polychaetes, pearl oyster, dipping, salinity   ABSTRAK Pengendalian polikaeta pengebor dengan menggunakan berbagai konsentrasi larutan garam telah dilakukan pada tiram mutiara (Pinctada maxima. Berdasarkan jumlah polikaeta yang keluar, hasil percobaan ini menunjukkan bahwa perendaman dengan konsentrasi garam 0 ppt. 45 ppt, dan 60 ppt selama 15 menit lebih efektif dibandingkan pada konsentrasi 15 dan 30 ppt. Tingkat kelangsungan hidup tiram mutiara yang diamati 7 hari setelah perendaman dalam larutan garam mencapai 100%. Kata kunci : Polikaeta. tiram mutiara, perendaman. salinitas

  1. Involvement of a novel p38 mitogen-activated protein kinase in larval metamorphosis of the polychaete Hydroides elegans (Haswell)

    KAUST Repository

    Wang, Hao

    2010-04-19

    Hydroides elegans is a common marine fouling organism in most tropical and subtropical waters. The life cycle of H. elegans includes a planktonic larval stage in which swimming larvae normally take 5 days to attain competency to settle. Larval metamorphosis marks the beginning of its benthic life; however, the endogenous molecular mechanisms that regulate metamorphosis remain largely unknown. In this study, a PCR-based suppressive subtractive hybridization (SSH) library was constructed to screen the genes expressed in competent larvae but not in precompetent larvae. Among the transcripts isolated from the library, 21 significantly matched sequences in the GenBank. Many of these isolated transcripts have putative roles in the reactive oxygen species (ROS) signal transduction pathway or in response to ROS stress. A putative novel p38 mitogen-activated protein kinase (MAPK), which was also isolated with SSH screen, was then cloned and characterized. The MAPK inhibitors assay showed that both p38 MAPK inhibitors SB202190 and SB203580 effectively inhibited the biofilm-induced metamorphosis of H. elegans. A cell stressors assay showed that H2O2 effectively induced larval metamorphosis of H. elegans, but the inductivity of H2O2 was also inhibited by both SB inhibitors. The catalase assay showed that the catalase could effetely inhibit H. elegans larvae from responding to inductive biofilm. These results showed that the p38 MAPK-dependent pathway plays critical role in controlling larval metamorphosis of the marine polychaete H. elegans, and the reactive oxygen radicals produced by biofilm could be the cue inducing larval metamorphosis. © 2010 Wiley-Liss, Inc.

  2. Long-term (1998 vs. 2010) large-scale comparison of soft-bottom benthic macrofauna composition in the Gulf of Lions, NW Mediterranean Sea

    Science.gov (United States)

    Bonifácio, Paulo; Grémare, Antoine; Gauthier, Olivier; Romero-Ramirez, Alicia; Bichon, Sabrina; Amouroux, Jean-Michel; Labrune, Céline

    2018-01-01

    We achieved a long term (i.e., 1998 vs. 2010) large scale (i.e., whole Gulf of Lions) study of benthic macrofauna composition in the Gulf of Lions based on the resampling of 91 stations located along 21 inshore-offshore transects. Results show that the 3 main benthic communities identified in 1998 were still present in 2010 although their composition changed. Using only year and station of sampling we found a significant space-time interaction explaining changes in macrofaunal community composition, and, in this study, stations differ primarily in terms of depth and distance to the Rhône river mouth. Temporal changes in benthic macrofauna composition were clearly most important at shallow stations (i.e., in the Littoral Fine Sand community) than at deep ones (i.e., Terrigenous Coastal Mud community). These results are in good agreement with the current paradigm according to which climatic oscillations such as NAO (North Atlantic Oscillation) and WeMO (Western Mediterranean Oscillation) are indirectly (i.e., through changes in the frequency of occurrence and the intensity of storms) controlling benthic macrofauna composition in the Gulf of Lions. This hypothesis is further supported by a meta-analysis of changes in the average and maximal yearly abundances of the polychaete Ditrupa arietina. At last, the spatial modelling of 1998 and 2010 benthic macrofauna compositions both suggested a significant effect of Rhône River inputs on the spatial distribution of benthic macrofauna in the Gulf of Lions.

  3. Biotransformation of the polycyclic aromatic hydrocarbon pyrene in the marine polychaete Nereis virens

    DEFF Research Database (Denmark)

    Jørgensen, Anne; Glessing, Anders M B; Rasmussen, Lene Juel

    2005-01-01

    In vivo and in vitro biotransformation of the polycyclic aromatic hydrocarbon (PAH) pyrene was investigated in the marine polychaete Nereis virens. Assays were designed to characterize phase I and II enzymes isolated from gut tissue. High-pressure liquid chromatography measurement of 1-hydroxypyr......In vivo and in vitro biotransformation of the polycyclic aromatic hydrocarbon (PAH) pyrene was investigated in the marine polychaete Nereis virens. Assays were designed to characterize phase I and II enzymes isolated from gut tissue. High-pressure liquid chromatography measurement of 1...

  4. First documentation and molecular confirmation of three trematode species (Platyhelminthes: Trematoda) infecting the polychaete Marenzelleria viridis (Annelida: Spionidae).

    Science.gov (United States)

    Phelan, Krystin; Blakeslee, April M H; Krause, Maureen; Williams, Jason D

    2016-01-01

    Polychaete worms are hosts to a wide range of marine parasites; yet, studies on trematodes using these ecologically important species as intermediate hosts are lacking. During examination of the spionid polychaete Marenzelleria viridis collected on the north shore of Long Island, New York, putative trematode cysts were discovered in the body cavity of these polychaetes. In order to verify these cysts as metacercariae of trematodes, specimens of the eastern mudsnail Ilyanassa obsoleta (a very common first intermediate host of trematodes in the region) were collected for molecular comparison. DNA barcoding using cytochrome C oxidase I regions confirmed the presence of three species of trematodes (Himasthla quissetensis, Lepocreadium setiferoides, and Zoogonus lasius) in both M. viridis and I. obsoleta hosts. Brown bodies were also recovered from polychaetes, and molecular testing confirmed the presence of L. setiferoides and Z. lasius, indicating an immune response of the polychaete leading to encapsulation of the cysts. From the 125 specimens of M. viridis collected in 2014, 95 (76.8 %) were infected with trematodes; of these 95 infected polychaetes, 86 (90.5 %) contained brown bodies. This is the first confirmation that trematodes use M. viridis as a second intermediate host and that this intermediate host demonstrates a clear immune response to metacercarial infection. Future research should explore the role of these polychaetes in trematode life cycles, the effectiveness of the immune response, and transmission pathways to vertebrate definitive hosts.

  5. Spatial relationships between polychaete assemblages and environmental variables over broad geographical scales.

    Directory of Open Access Journals (Sweden)

    Lisandro Benedetti-Cecchi

    2010-09-01

    Full Text Available This study examined spatial relationships between rocky shore polychaete assemblages and environmental variables over broad geographical scales, using a database compiled within the Census of Marine Life NaGISA (Natural Geography In Shore Areas research program. The database consisted of abundance measures of polychaetes classified at the genus and family levels for 74 and 93 sites, respectively, from nine geographic regions. We tested the general hypothesis that the set of environmental variables emerging as potentially important drivers of variation in polychaete assemblages depend on the spatial scale considered. Through Moran's eigenvector maps we indentified three submodels reflecting spatial relationships among sampling sites at intercontinental (>10,000 km, continental (1000-5000 km and regional (20-500 km scales. Using redundancy analysis we found that most environmental variables contributed to explain a large and significant proportion of variation of the intercontinental submodel both for genera and families (54% and 53%, respectively. A subset of these variables, organic pollution, inorganic pollution, primary productivity and nutrient contamination was also significantly related to spatial variation at the continental scale, explaining 25% and 32% of the variance at the genus and family levels, respectively. These variables should therefore be preferably considered when forecasting large-scale spatial patterns of polychaete assemblages in relation to ongoing or predicted changes in environmental conditions. None of the variables considered in this study were significantly related to the regional submodel.

  6. Oxygen dynamics and porewater transport in sediments inhabited by the invasive polychaete Marenzelleria viridis

    DEFF Research Database (Denmark)

    Jovanovic, Zeljko; Larsen, Morten; Quintana, Cintia Organo

    2014-01-01

    The polychaete Marenzelleria viridis is an invasive species and often replaces the native Nereis diversicolor. This shift leads to more reduced conditions and changes in the biogeochemical function of the sediments. By combining imaging techniques for O2 (planar optodes) and irrigation patterns...

  7. 1-Hydroxypyrene as a biomarker of PAH exposure in the marine polychaete Nereis diversicolor

    DEFF Research Database (Denmark)

    Tairova, Zhanna; Giessing, Anders; Hansen, Rikke

    2009-01-01

    The possibility of using the pyrene metabolite I-hydroxypyrene as a biomarker of polycyclic aromatic hydrocarbons (PAHs) exposure was investigated by exposure of the marine polychaete Nereis diversicolor to several PAHs in the laboratory. Animals were exposed to pyrene alone and to five different...

  8. Influence of salinity and temperature on the activity of biosurfactants by polychaete-associated isolates.

    Science.gov (United States)

    Rizzo, Carmen; Michaud, Luigi; Syldatk, Christoph; Hausmann, Rudolf; De Domenico, Emilio; Lo Giudice, Angelina

    2014-02-01

    Influence of different parameters on biosurfactant (BS) activity was carried out on strains that were isolated from the polychaetes Megalomma claparedei, Sabella spallanzanii and Branchiomma luctuosum and additional 30 strains that were previously identified as potential BS producers from crude oil enrichments of the same polychaete specimens. The selection of BS-producing strains from polychaete natural samples was carried out by using standard screening tests. The BS activity by each isolate was evaluated for the effect of salinity and temperature on emulsion production and surface tension reduction, during incubation in mineral medium supplemented with tetradecane or diesel oil. All isolates showed a similar time course of BS activity, and the latter was more influenced by salinity rather than temperature. Some of the BS producers belonged to genera that have not (i.e. Citricoccus, Cellulophaga, Tenacibaculum and Maribacter) or have poorly been (Psychrobacter, Vibrio, and Pseudoalteromonas) reported as able to produce BSs. This is remarkable as some of them have previously been detected in hydrocarbon-enriched samples. Results confirm that filter-feeding polychaetes are an efficient source for the isolation of BS producers.

  9. Integrative analysis of polychaete ontogeny: cell proliferation patterns and myogenesis in trochophore larvae of Sabellaria alveolata

    DEFF Research Database (Denmark)

    Brinkmann, Nora; Wanninger, Andreas

    2010-01-01

    of this crucial mesoderm-derived organ system, particularly in indirect developing representatives of the Lophotrochozoa. Here, we document the temporal and spatial patterns of muscle formation and cell proliferation in the polychaete Sabellaria alveolata during planktotrophic larval development in order...

  10. New Insights into Polychaete Traces and Fecal Pellets: Another Complex Ichnotaxon?

    Science.gov (United States)

    Kulkarni, Kantimati G; Panchang, Rajani

    2015-01-01

    Neoichnological observations help refine paleoichnological records. The present study reports extensive observations on the distribution, morphology, occurrence and association of burrows and fecal pellets of the polychaete Nereis diversicolor in the Kundalika Estuary on the west coast of India. Our holistic study of these modern-day traces suggests it to be a complex trace arising from domichnial, fodinichnial and possibly pascichnial behavior of polychaetes. The study for the first time reports extensive fecal pellet production, distribution and their preservation as thick stacks in modern estuarine environment. These observations testify the fossilization potential of pellets and provide an explanation to their origin in the geological record. Their occurrence as strings associated with mounds not only suggests pascichnial behaviour of polychaetes but also allows the assignment of post-Paleozoic Tomaculum to the activity of polychaete worms. The production of fecal pellets in such large quantities plays a major role in increasing the average grain size of the substrate of these estuarine tidal flats, thereby improving aeration within the substrate.

  11. New Insights into Polychaete Traces and Fecal Pellets: Another Complex Ichnotaxon?

    Directory of Open Access Journals (Sweden)

    Kantimati G Kulkarni

    Full Text Available Neoichnological observations help refine paleoichnological records. The present study reports extensive observations on the distribution, morphology, occurrence and association of burrows and fecal pellets of the polychaete Nereis diversicolor in the Kundalika Estuary on the west coast of India. Our holistic study of these modern-day traces suggests it to be a complex trace arising from domichnial, fodinichnial and possibly pascichnial behavior of polychaetes. The study for the first time reports extensive fecal pellet production, distribution and their preservation as thick stacks in modern estuarine environment. These observations testify the fossilization potential of pellets and provide an explanation to their origin in the geological record. Their occurrence as strings associated with mounds not only suggests pascichnial behaviour of polychaetes but also allows the assignment of post-Paleozoic Tomaculum to the activity of polychaete worms. The production of fecal pellets in such large quantities plays a major role in increasing the average grain size of the substrate of these estuarine tidal flats, thereby improving aeration within the substrate.

  12. Distributional patterns of shallow-water polychaetes in the Magellan region: a zoogeographical and ecological synopsis

    Directory of Open Access Journals (Sweden)

    Américo Montiel San Martín

    2005-12-01

    Full Text Available The zoogeography of polychaete annelids was described for the Magellan region. This work considered information available from 19 expeditions carried out in the last 124 years of polychaete taxonomic research around the southernmost tip of the South American continental shelf. The polychaete fauna of the Magellan region comprised a total of 431 species belonging to 108 genera and 41 families. MDS and ANOSIM analyses showed the Magellan region to be divided into two subregions, one on the Pacific side of the tip of South America and one on the Atlantic side. These subregions showed a low percentage of “endemic species” ( 70% of the species recorded for the whole Magellan region showed a wide distribution range, and there were especially high affinities with Antarctic and Subantarctic areas. We suggest that the opening of the Straits of Magellan created a new pathway for enhanced exchange of faunal elements between the Pacific and the Atlantic. Transport of larvae via easterly directed currents of the West Wind Drift plays an important role in current distribution patterns of polychaete fauna around the tip of South America.

  13. Biomixing generated by benthic filterfeeders: A diffusion model for near-bottom phytoplankton depletion

    DEFF Research Database (Denmark)

    Scheel Larsen, Poul; Riisgård, H.U.

    1997-01-01

    Transient concentration distributions of flagellate cells (Rhodomonas sp.) measured in laboratory experiments (Riisgård et al., 1996 a,b) have been examined to develop a diffusion model for the process of phytoplankton depletion in stagnant seawater above populations of benthic filter......-feeders, the polychaete Nereis diversicolor and the ascidian Ciona intestinalis, respectively. The model is based on sinks located at inhalant openings and Fick's law with an effective diffusivity that decreases with distance above the bottom due to the biomixing generated by exhalant and inhalant feeding currents. For N....... diversicolor, having inhalant and exhalant openings flush with the sediment surface and a moderate exhalant jet velocity of about 0.01 m s-1, concentration boundary layer growth is retarded and limited by the low values of diffusivity prevailing at heights greater than about 0.05 m above the bottom. For C...

  14. Cross shelf benthic biodiversity patterns in the Southern Red Sea

    KAUST Repository

    Ellis, Joanne

    2017-03-21

    The diversity of coral reef and soft sediment ecosystems in the Red Sea has to date received limited scientific attention. This study investigates changes in the community composition of both reef and macrobenthic communities along a cross shelf gradient. Coral reef assemblages differed significantly in species composition and structure with location and depth. Inner shelf reefs harbored less abundant and less diverse coral assemblages with higher percentage macroalgae cover. Nutrient availability and distance from the shoreline were significantly related to changes in coral composition and structure. This study also observed a clear inshore offshore pattern for soft sediment communities. In contrast to the coral reef patterns the highest diversity and abundance of soft sediment communities were recorded at the inshore sites, which were characterized by a higher number of opportunistic polychaete species and bivalves indicative of mild disturbance. Sediment grain size and nutrient enrichment were important variables explaining the variability. This study aims to contribute to our understanding of ecosystem processes and biodiversity in the Red Sea region in an area that also has the potential to provide insight into pressing topics, such as the capacity of reef systems and benthic macrofaunal organisms to adapt to global climate change.

  15. The role of pelagic-benthic coupling in structuring littoral benthic communities at Terra Nova Bay (Ross Sea and in the Straits of Magellan

    Directory of Open Access Journals (Sweden)

    Riccardo Cattaneo-Vietti

    1999-12-01

    Full Text Available In Antarctic and peri-Antarctic regions, benthic communities are persistent in time and show high biomass and large numbers of individuals, mainly consisting of suspension and deposit feeders. In fact, apart from recruitment, the major factor structuring these communities is the high flow of organic matter from the pelagic domain to the bottom, representing an important energy source for the benthic organisms. The aim of this paper is to review, compile and compare the data from earlier investigations in Terra Nova Bay (Ross Sea and the Straits of Magellan, in order to come to a more general conclusion about the role of the pelagic-benthic coupling in structuring littoral benthic communities in southern coastal areas. Few measurements of flux rates and the biochemical composition of the sinking particles occurring in Antarctic and peri-Antarctic shallow waters are available, but a compilation of our own data and others allows a comparison of these two systems. The different environmental conditions between Antarctica and the Straits of Magellan lead to differences in the origin of the particulate organic matter and in its biochemical composition, and consequently in the coupling between pelagic and benthic domains. At Terra Nova Bay the summer particulate matter shows a high labile fraction of a good food value: its flux has been evaluated at about 0.67 g m-2d-1. Conversely, the Straits of Magellan show multi-structured ecosystems where the quality and quantity of the organic matter flux towards the bottom change according to the local geomorphology and current dynamics. Moreover, the three-dimensional assemblages of suspension-feeders, so common in Antarctic shallow waters, seem to be absent in the Magellan area. In particular sponges, gorgonarians and bryozoans play a secondary role inside the Straits of Magellan, where polychaetes (60% and molluscs (9-10% are dominant on soft bottoms, and where they reach high values in density and biomass

  16. Internal tides affect benthic community structure in an energetic submarine canyon off SW Taiwan

    Science.gov (United States)

    Liao, Jian-Xiang; Chen, Guan-Ming; Chiou, Ming-Da; Jan, Sen; Wei, Chih-Lin

    2017-07-01

    Submarine canyons are major conduits of terrestrial and shelf organic matter, potentially benefiting the seafloor communities in the food-deprived deep sea; however, strong bottom currents driven by internal tides and the potentially frequent turbidity currents triggered by storm surges, river flooding, and earthquakes may negatively impact the benthos. In this study, we investigated the upper Gaoping Submarine Canyon (GPSC), a high-sediment-yield canyon connected to a small mountain river (SMR) off southwest (SW) Taiwan. By contrasting the benthic meiofaunal and macrofaunal communities within and outside the GPSC, we examined how food supplies and disturbance influenced the benthic community assemblages. The benthic communities in the upper GPSC were mainly a nested subset of the adjacent slope assemblages. Several meiofaunal (e.g. ostracods) and macrofaunal taxa (e.g. peracarid crustaceans and mollusks) that typically occurred on the slope were lost from the canyon. The polychaete families switched from diverse feeding guilds on the slope to motile subsurface deposit feeders dominant in the canyon. The diminishing of epibenthic peracarids and proliferation of deep burrowing polychaetes in the GPSC resulted in macrofauna occurring largely within deeper sediment horizons in the canyon than on the slope. The densities and numbers of taxa were depressed with distinct and more variable composition in the canyon than on the adjacent slope. Both the densities and numbers of taxa were negatively influenced by internal tide flushing and positively influenced by food availability; however, the internal tides also negatively influenced the food supplies. While the meiofauna and macrofauna densities were both depressed by the extreme physical conditions in the GPSC, only the macrofaunal densities increased with depth in the canyon, presumably related to increased frequency and intensity of disturbance toward the canyon head. The population densities of meiofauna, on the

  17. Feeding ecology of Bathyraja macloviana (Rajiformes, Arhynchobatidae: a polychaete-feeding skate from the South-west Atlantic

    Directory of Open Access Journals (Sweden)

    Ezequiel Mabragaña

    2005-09-01

    Full Text Available The present paper analyses the diet, feeding strategy and niche width of B. macloviana in a sector of the Argentinean Continental Shelf (ACS. Individuals (n = 147 were collected from 43 sampling stations in late summer and autumn 2001. Thirty one alimentary items in the gut contents were found, with a clear dominance of polychaetes. Crustaceans were secondary alimentary items. The polychaete Travisia kerguelensis was the main food item ingested, followed by Nepthyidae, Sabellidae and Lumbrineridae, while Gammaridae and Cirolanidae were the main items among crustaceans. The niche width and feeding strategy displayed by B. macloviana support the specialisation towards polychaetes throughout this study. Slow motile and infaunal species constitute major preys. The results suggest that this skate actively selects worms, reflecting, in some sense, the composition of the polychaete assemblage, and allowing a low dietary overlap with other sympatric skates of the ACS.

  18. NEPR Benthic Habitat Map 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This benthic habitat map was created from a semi-automated habitat mapping process, using a combination of bathymetry, satellite imagery, aerial imagery and...

  19. National Benthic Infaunal Database (NBID)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The NBID is a quantitative database on abundances of individual benthic species by sample and study region, along with other synoptically measured environmental...

  20. Benthic fauna of mangrove environment

    Digital Repository Service at National Institute of Oceanography (India)

    Parulekar, A.H.

    distribution of benthic communities in mangrove environment is governEd. by tidal amplitude, light penetration, nature of substratum and distance from the sea. The littoral zone, neritic zone, Barnacle-oyster zone, Uca zone, Polychaeta zone have been delineated...

  1. Sewage-induced disturbance on polychaetes inhabiting intertidal mussel beds of Brachidontes rodriguezii off Mar del Plata (SW Atlantic, Argentina.

    Directory of Open Access Journals (Sweden)

    Rodolfo Elías

    2006-12-01

    Full Text Available Continuous and short-term disturbances are produced on intertidal Brachidontes rodriguezii mussel beds by the sewage outfall of Mar del Plata, SW Atlantic. The effects on the associated polychaetes living on and between mussels were investigated, in both the spatial and short-term temporal scales. Multivariate methods show that the polychaete fauna was influenced by tidal level, total amount of sediment accumulated between mussels, distance from the sewage outfall, organic carbon of interstitial sediments, and sewage volume before and after the summer season. Environmental variables in the water column fitted with a spatial and temporal organic gradient. Capitella ‘capitata’ sp. showed typical opportunistic behaviour in relation to organic enrichment, as did Neanthes succinea, both being numerically dominant near the sewage discharge. Cirratulus sp., Caulleriella alata, and Boccardia polybranchia were common at intermediate distances from the outfall. Syllis prolixa, S. gracilis, and Protoariciella uncinata reached their highest abundance at intermediate stations and were characteristic of the control site. Close to the outfall mussel density and dominance is low, and opportunist polychaetes successfully colonize organically enriched interstitial sediments. At intermediate distances from the outfall sediments retained by mussels reach their maximum values, and density of polychaetes is also high. The control station is characterized by monolayered mussel beds and very low diversity of polychaetes. Opportunistic polychaetes increase in response to short-term increases of sewage discharge during the summer season (November-March.

  2. Managing the marine aquarium trade: revealing the data gaps using ornamental polychaetes.

    Directory of Open Access Journals (Sweden)

    Joanna M Murray

    Full Text Available The marine aquarium industry has great potential to generate jobs in low-income coastal communities creating incentives for the maintenance of a healthy coral reef, if effectively managed. In the absence of current monitoring or legislation to govern the trade, baseline information regarding the species, number and source location of animals traded is missing despite being critical for its successful management and sustainability. An industry assessment to establish the number and provenance of species of ornamental polychaetes (sabellids and serpulids traded was undertaken across UK wholesalers and retailers. Six geographical regions exporting fan worms were identified. Singapore contributed the highest percentage of imports, but of only one worm "type" whereas Bali, the second largest source, supplied five different worm "types". Over 50% of UK retailers were supplied by one wholesaler while the remainder were stocked by a mixture of one other wholesaler and/or direct imports from the source country. We estimate that up to 18,500 ornamental polychaetes (16,980 sabellids and 1,018 serpulids are sold annually in the UK revealing a drastic underestimation of currently accepted trade figures. Incorrect identification (based on exporting region or visual characteristics of traded animals exacerbates the inaccuracy in market quantification, although identification of preserved sabellids using published keys proved just as inconclusive with high within-species variability and the potential for new or cryptic species. A re-description of the polychaete groups traded using a combination of molecular and morphological techniques is necessary for effective identification and market quantification. This study provides the first assessment of ornamental polychaetes but more importantly highlights the issues surrounding the collection of baseline information necessary to manage the aquarium trade. We recommend that future management should be community

  3. Distribution and abundance of macrobenthic polychaetes along the South Indian coast

    Digital Repository Service at National Institute of Oceanography (India)

    Musale, A.S.; Desai, D.V.

    and distribution. Keywords Polychaete • Macrobenthos • Indian coast • Pollution indicator • Organic carbon 1 Introduction Soft bottom macrobenthic communities are key components in the functioning of coastal and marine ecosystems (Lu 2005... of benthos on the South-west coast of India. In: Fertility of the sea. Vol. I, J. D. Costlow Jr. (Ed.) Gordon and Breach Scientific Publication, New York: 225-239. Lu, L. (2005). The relationship between soft bottom macrobenthic communities...

  4. Errant polychaetes of the continental plattaform of Tamaulipas, México.

    Directory of Open Access Journals (Sweden)

    V. Hugo Delgado-Blas

    2014-06-01

    Full Text Available 24 species of errant polychaetes have been recorded for the eastern Mexican continental shelf: Two Phyllodocidae, one Pilargidae, two Syllicdae, four Nereididae, two Glyceridae, two Goniadidae, three Nephtyidae, two Onuphidae, five Lumbrineridae y one Dorvilleidae. Two of these were the first to be recorded in Mexico, two from Mexican waters in the Gulf of Mexico and 11 new ones recorded in Tamaulipas.

  5. Management and Risk Assessment of Sabellid Polychaete Infestations in Abalone Mariculture Facilities

    OpenAIRE

    Kuris, Armand M.

    1996-01-01

    In October 1993, growers at some commercial abalone mariculture facilities (AMFs) in Southern California brought an interesting sabellid polychaete to our attention. The worm infested shells of cultured red abalone, Haliotis rufescens. Heavily infested abalone ceased growth. Their shells exhibited domed teratology often lacking respiratory holes. The worms appeared to bore into the shell. We discovered that all AMFs in California were infested; several were so heavily infest...

  6. Spatial changes in sublittoral soft-bottom polychaete assemblages due to river inputs and sewage discharges

    Science.gov (United States)

    Cardell, María José; Sardà, Rafael; Romero, Javier

    1999-07-01

    Spatial changes in species composition and structure of sublittoral soft-bottom polychaete assemblages along a transect parallel to the shoreline off the Barcelonès and Maresme regions on the Spanish Catalan coast (NW Mediterranean sea) are described. The transect (20 m mean depth) covers 30 km through an area affected by both water sewage discharges and river outflow. These effluents generate a spatial gradient of both silt and organic enrichment, according to the prevailing southerly currents in the zone. South of the effluents, eutrophized sediments supported a macrofaunal assemblage which was typical of polluted bottoms, characterized by the massive presence of Capitella capitata and Malacoceros fuliginosus, high abundance and biomass, low values of species richness, and a simplified trophic structure dominated by surface and subsurface-deposit feeders. North of the effluents, both the mud and organic matter content in sediment decreased drastically and the polychaete assemblages described were progressively less affected with distance. Thus, a clear change in species composition, as well as low values of abundance and biomass, increases in species richness, and a more complex trophic structure on the polychaete assemblages was observed north rather than south of the effluents.

  7. Changes in polychaete standing stock and diversity on the northern side of Senghor Seamount (NE Atlantic)

    Science.gov (United States)

    Chivers, A. J.; Narayanaswamy, B. E.; Lamont, P. A.; Dale, A.; Turnewitsch, R.

    2013-06-01

    Interest in seamount research has gathered momentum over the past five years in an effort to understand the physical, geochemical and biological characteristics as well as the interconnectedness of seamount ecosystems. The majority of biological seamount research has concentrated upon the rich and diverse suspension feeding organisms that dominate the megafauna, such as gorgonians and antipatharian corals; by comparison there have been few studies that have investigated the no less enigmatic, but possibly just as important infauna. To help fill this knowledge gap, the macrofaunal community was sampled from a total of five stations along a northerly transect (capturing water depths from ∼130 m to ∼3300 m), on Senghor Seamount (NE Atlantic). The focus of this study is on the polychaete communities. Polychaete abundance peaked at the summit and a mid-slope station (∼1500 m), a pattern mirrored by the biomass values. The polychaete community along the transect appeared to be particularly diverse, with 135 species nominally identified to putative species from a total of 954 individuals. A diversity maximum was identified on the upper slope at ∼800 m depth, with species diversity, richness and evenness also all peaking at this station. Depth is likely to be a significant factor in determining levels of similarity between stations.

  8. Contrasting metal detoxification in polychaetes, bivalves and fish from a contaminated bay.

    Science.gov (United States)

    Fan, Wenhong; Xu, Zhizhen; Wang, Wen-Xiong

    2015-02-01

    Jinzhou Bay in Bohai, Northern China, is historically contaminated with metals, but the organisms living in such contaminated environments are much less well studied. In this study, we contrasted the different subcellular and detoxification responses of polychaetes, bivalves and fish collected from different contaminated sites in Jinzhou Bay. In polychaete Neanthes japonica, metal-rich granule (MRG) was the main biologically detoxified metal compartment, and metallothionein-like protein (MTLP) detoxified a relatively smaller fraction of accumulated metals. The importance of MRG increased whereas that of MTLP decreased with increasing metal bioaccumulation. Detoxification in the two bivalves was similar to that in the polychaetes. However, the MRG appeared to play only a minor role in metal binding and detoxification in the gills and livers of fish, whereas MTLP was the dominating detoxification pool. Cellular debris was an important pool binding with metals in the three marine animals. Our study highlighted the contrasting cellular binding and detoxification among different marine organisms living in contaminated environments. Copyright © 2014 Elsevier B.V. All rights reserved.

  9. Changes in polychaete standing stock and diversity on the northern side of Senghor Seamount (NE Atlantic

    Directory of Open Access Journals (Sweden)

    A. J. Chivers

    2013-06-01

    Full Text Available Interest in seamount research has gathered momentum over the past five years in an effort to understand the physical, geochemical and biological characteristics as well as the interconnectedness of seamount ecosystems. The majority of biological seamount research has concentrated upon the rich and diverse suspension feeding organisms that dominate the megafauna, such as gorgonians and antipatharian corals; by comparison there have been few studies that have investigated the no less enigmatic, but possibly just as important infauna. To help fill this knowledge gap, the macrofaunal community was sampled from a total of five stations along a northerly transect (capturing water depths from ∼130 m to ∼3300 m, on Senghor Seamount (NE Atlantic. The focus of this study is on the polychaete communities. Polychaete abundance peaked at the summit and a mid-slope station (∼1500 m, a pattern mirrored by the biomass values. The polychaete community along the transect appeared to be particularly diverse, with 135 species nominally identified to putative species from a total of 954 individuals. A diversity maximum was identified on the upper slope at ∼800 m depth, with species diversity, richness and evenness also all peaking at this station. Depth is likely to be a significant factor in determining levels of similarity between stations.

  10. Comparative Glycoproteome Analysis: Dynamics of Protein Glycosylation during Metamorphic Transition from Pelagic to Benthic Life Stages in Three Invertebrates

    KAUST Repository

    Chandramouli, Kondethimmanahalli

    2012-02-03

    The life cycle of most benthic marine invertebrates has two distinct stages: the pelagic larval stage and the sessile juvenile stage. The transition between the larval stage and the juvenile stage is often abrupt and may be triggered by post-translational modification of proteins. Glycosylation, a very important post-translational modification, influences the biological activity of proteins. We used two-dimensional gel electrophoresis (2-DE) followed by glycoprotein-specific fluorescence staining and mass spectrometry with the goal of identifying glycosylation pattern changes during larval settlement and metamorphosis in barnacles, bryozoans, and polychaetes. Our results revealed substantial changes in the protein glycosylation patterns from larval to juvenile stages. Before metamorphosis, the degree of protein glycosylation was high in the barnacle Balanus (=Amphibalanus) amphitrite and the spionid polychaete Pseudopolydora vexillosa, whereas it increased after metamorphosis in the bryozoan Bugula neritina. We identified 19 abundant and differentially glycosylated proteins in these three species. Among the proteins, cellular stress- and metabolism-related proteins exhibited distinct glycosylation in B. amphitrite and B. neritina, whereas fatty acid metabolism-related proteins were abundantly glycosylated in P. vexillosa. Furthermore, the protein and gene expression analysis of some selected glycoproteins revealed that the degree of protein glycosylation did not always complement with transcriptional and translational changes associated with the larval-juvenile transition. The current study provides preliminary information on protein glycosylation in marine invertebrates that will serve as a solid basis for future comprehensive analysis of glycobiology during larval settlement and metamorphosis. © 2011 American Chemical Society.

  11. Neuroanatomy of the vestimentiferan tubeworm Lamellibrachia satsuma provides insights into the evolution of the polychaete nervous system.

    Directory of Open Access Journals (Sweden)

    Norio Miyamoto

    Full Text Available Vestimentiferan tubeworms are marine invertebrates that inhabit chemosynthetic environments, and although recent molecular phylogenetic analyses have suggested that vestimentiferan tubeworms are derived from polychaete annelids, they show some morphological features that are different from other polychaetes. For example, vestimentiferans lack a digestive tract and have less body segments and comparative neuroanatomy can provide essential insight into the vestimentiferan body plan and its evolution. In the present study, we investigated the adult nervous system in the vestimentiferan Lamellibrachia satsuma using antibodies against synapsin, serotonin, FMRMamide and acetylated α-tubulin. We also examined the expressions of neural marker genes, elav and synaptotagmin to reveal the distribution of neuronal cell bodies. Brain anatomy shows simple organization in Lamellibrachia compared to other polychaetes. This simplification is probably due to the loss of the digestive tract, passing through the body between the brain and the subesophageal ganglion. In contrast, the ventral nerve cord shows a repeated organizational structure as in the other polychaetes, despite the absence of the multiple segmentation of the trunk. These results suggest that the brain anatomy is variable depending on the function and the condition of surrounding tissues, and that the formation of the rope ladder-like nervous system of the ventral nerve cord is independent from segmentation in polychaetes.

  12. Benthic macrofauna of the Andaman Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Parulekar, A.H.; Ansari, Z.A.

    Macrobenthic fauna in the depth range 11 to 2150m comprised 22 faunal taxa. Of these, the polychaetes were the most dominant group and contributed 76.8%. Distribution of macrofauna was substrate specific with maximum (410m -2)population on clayey...

  13. Biophysical control of intertidal benthic macroalgae revealed by high-frequency multispectral camera images

    Science.gov (United States)

    van der Wal, Daphne; van Dalen, Jeroen; Wielemaker-van den Dool, Annette; Dijkstra, Jasper T.; Ysebaert, Tom

    2014-07-01

    Intertidal benthic macroalgae are a biological quality indicator in estuaries and coasts. While remote sensing has been applied to quantify the spatial distribution of such macroalgae, it is generally not used for their monitoring. We examined the day-to-day and seasonal dynamics of macroalgal cover on a sandy intertidal flat using visible and near-infrared images from a time-lapse camera mounted on a tower. Benthic algae were identified using supervised, semi-supervised and unsupervised classification techniques, validated with monthly ground-truthing over one year. A supervised classification (based on maximum likelihood, using training areas identified in the field) performed best in discriminating between sediment, benthic diatom films and macroalgae, with highest spectral separability between macroalgae and diatoms in spring/summer. An automated unsupervised classification (based on the Normalised Differential Vegetation Index NDVI) allowed detection of daily changes in macroalgal coverage without the need for calibration. This method showed a bloom of macroalgae (filamentous green algae, Ulva sp.) in summer with > 60% cover, but with pronounced superimposed day-to-day variation in cover. Waves were a major factor in regulating macroalgal cover, but regrowth of the thalli after a summer storm was fast (2 weeks). Images and in situ data demonstrated that the protruding tubes of the polychaete Lanice conchilega facilitated both settlement (anchorage) and survival (resistance to waves) of the macroalgae. Thus, high-frequency, high resolution images revealed the mechanisms for regulating the dynamics in cover of the macroalgae and for their spatial structuring. Ramifications for the mode, timing, frequency and evaluation of monitoring macroalgae by field and remote sensing surveys are discussed.

  14. The offshore benthic fish community

    Science.gov (United States)

    Lantry, Brian F.; Lantry, Jana R.; Weidel, Brian C.; Walsh, Maureen; Hoyle, James A.; Schaner, Teodore; Neave, Fraser B.; Keir, Michael

    2014-01-01

    Lake Ontario’s offshore benthic fish community includes primarily slimy sculpin, lake whitefish, rainbow smelt, lake trout, burbot, and sea lamprey. Of these, lake trout have been the focus of an international restoration effort for more than three decades (Elrod et al. 1995; Lantry and Lantry 2008). The deepwater sculpin and three species of deepwater ciscoes (Coregonus spp.) that were historically important in the offshore benthic zone became rare or were extirpated by the 1960s (Christie 1973; Owens et al. 2003; Lantry et al. 2007b; Roth et al. 2013). Ecosystem changes continue to influence the offshore benthic fish community, including the effects of dreissenid mussels, the near disappearance of burrowing amphipods (Diporeia spp.) (Dermott et al. 2005; Watkins et al. 2007), and the increased abundance and expanded geographic distribution of round goby (see Nearshore Fish Community chapter) (Lantry et al. 2007b). The fish-community objectives for the offshore benthic fish community, as described by Stewart et al. (1999), are:

  15. Free-living marine polychaetes (Annelida inhabiting hard-bottom substrates in Trinidad and Tobago, West Indies

    Directory of Open Access Journals (Sweden)

    Judith F Gobin

    2010-03-01

    Full Text Available As part of a larger comparative study, marine polychaete hard-bottom assemblages were surveyed using artificial substrate units (ASUs deployed at four sites off the islands of Trinidad and Tobago. The polychaete fauna was represented by 19 families comprising 89 species. The syllid Exogone dispar was the most abundant polychaete followed closely by the serpulid Pseudovermilia occidentalis. At the family level, the polychaete fauna inhabiting the ASUs is similar to the fauna from other temperate and tropical locations. Omnivorous species were dominant (70 %, followed by filter feeders (20%. This survey provides first records of the hard-bottom polychaete fauna of Trinidad and Tobago and adds new information about the geographic range of some polychaete species. Rev. Biol. Trop. 58 (1: 147-157. Epub 2010 March 01.Como parte de un estudio comparativo más amplio, ensamblajes marinos de poliquetos de fondos duros fueron contabilizados utilizando unidades de sustrato artificial ubicadas en cuatro sitios de las islas de Trinidad y Tobago. La fauna de poliquetos estuvo representada por 19 familias, integradas por 89 especies. Exogone dispar fue el poliqueto más abundante seguido cercanamente por Pseudovermilia occidentalis. A nivel de familia, la fauna de poliquetos que habitan las unidades de sustrato artificial es similar a la de otras localidades templadas y tropicales. Las omnívoras fueron las especies dominantes (70%, seguido por las filtradoras (20%. Este estudio proporciona los primeros registros de la fauna de poliquetos del fondo duro de Trinidad y Tobago, y añade nueva información sobre la distribución geográfica de algunas especies de poliquetos.

  16. Proteomic profiling during the pre-competent to competent transition of the biofouling polychaete Hydroides elegans.

    Science.gov (United States)

    Zhang, Yu; Sun, Jin; Zhang, Huoming; Chandramouli, Kondethimmanahalli H; Xu, Ying; He, Li-Sheng; Ravasi, Timothy; Qian, Pei-Yuan

    2014-09-01

    The polychaete, Hydroides elegans, is a tube-building worm that is widely distributed in tropical and subtropical seas. It is a dominant fouling species and thus a major target organism in antifouling research. Here, the first high-throughput proteomic profiling of pre-competent and competent larvae of H. elegans is reported with the identification of 1,519 and 1,322 proteins, respectively. These proteins were associated with a variety of biological processes. However, a large proportion was involved in energy metabolism, redox homeostasis, and microtubule-based processes. A comparative analysis revealed 21 proteins that were differentially regulated in larvae approaching competency.

  17. Proteomic profiling during the pre-competent to competent transition of the biofouling polychaete Hydroides elegans

    KAUST Repository

    Zhang, Yu

    2014-08-22

    The polychaete, Hydroides elegans, is a tube-building worm that is widely distributed in tropical and subtropical seas. It is a dominant fouling species and thus a major target organism in antifouling research. Here, the first high-throughput proteomic profiling of pre-competent and competent larvae of H. elegans is reported with the identification of 1,519 and 1,322 proteins, respectively. These proteins were associated with a variety of biological processes. However, a large proportion was involved in energy metabolism, redox homeostasis, and microtubule-based processes. A comparative analysis revealed 21 proteins that were differentially regulated in larvae approaching competency.

  18. Differential expression of proteins and phosphoproteins during larval metamorphosis of the polychaete Capitella sp. I

    Directory of Open Access Journals (Sweden)

    Qian Pei-Yuan

    2011-09-01

    Full Text Available Abstract Background The spontaneous metamorphosis of the polychaete Capitella sp. I larvae into juveniles requires minor morphological changes, including segment formation, body elongation, and loss of cilia. In this study, we investigated changes in the expression patterns of both proteins and phosphoproteins during the transition from larvae to juveniles in this species. We used two-dimensional gel electrophoresis (2-DE followed by multiplex fluorescent staining and MALDI-TOF mass spectrometry analysis to identify the differentially expressed proteins as well as the protein and phosphoprotein profiles of both competent larvae and juveniles. Results Twenty-three differentially expressed proteins were identified in the two developmental stages. Expression patterns of two of those proteins were examined at the protein level by Western blot analysis while seven were further studied at the mRNA level by real-time PCR. Results showed that proteins related to cell division, cell migration, energy storage and oxidative stress were plentifully expressed in the competent larvae; in contrast, proteins involved in oxidative metabolism and transcriptional regulation were abundantly expressed in the juveniles. Conclusion It is likely that these differentially expressed proteins are involved in regulating the larval metamorphosis process and can be used as protein markers for studying molecular mechanisms associated with larval metamorphosis in polychaetes.

  19. Differential expression of proteins and phosphoproteins during larval metamorphosis of the polychaete Capitella sp. I

    KAUST Repository

    Chandramouli, Kondethimmanahalli

    2011-09-03

    Background: The spontaneous metamorphosis of the polychaete Capitella sp. I larvae into juveniles requires minor morphological changes, including segment formation, body elongation, and loss of cilia. In this study, we investigated changes in the expression patterns of both proteins and phosphoproteins during the transition from larvae to juveniles in this species. We used two-dimensional gel electrophoresis (2-DE) followed by multiplex fluorescent staining and MALDI-TOF mass spectrometry analysis to identify the differentially expressed proteins as well as the protein and phosphoprotein profiles of both competent larvae and juveniles.Results: Twenty-three differentially expressed proteins were identified in the two developmental stages. Expression patterns of two of those proteins were examined at the protein level by Western blot analysis while seven were further studied at the mRNA level by real-time PCR. Results showed that proteins related to cell division, cell migration, energy storage and oxidative stress were plentifully expressed in the competent larvae; in contrast, proteins involved in oxidative metabolism and transcriptional regulation were abundantly expressed in the juveniles.Conclusion: It is likely that these differentially expressed proteins are involved in regulating the larval metamorphosis process and can be used as protein markers for studying molecular mechanisms associated with larval metamorphosis in polychaetes. © 2011 Chandramouli et al; licensee BioMed Central Ltd.

  20. Proteomic analysis during larval development and metamorphosis of the spionid polychaete Pseudopolydora vexillosa

    KAUST Repository

    Mok, Flora SY

    2009-12-14

    Background: While the larval-juvenile transition (metamorphosis) in the spionid polychaete Pseudopolydora vexillosa involves gradual morphological changes and does not require substantial development of juvenile organs, the opposite occurs in the barnacle Balanus amphitrite. We hypothesized that the proteome changes during metamorphosis in the spionids are less drastic than that in the barnacles. To test this, proteomes of pre-competent larvae, competent larvae (ready to metamorphose), and juveniles of P. vexillosa were compared using 2-dimensional gel electrophoresis (2-DE), and they were then compared to those of the barnacle.Results: Unlike the significant changes found during barnacle metamorphosis, proteomes of competent P. vexillosa larvae were more similar to those of their juveniles. Pre-competent larvae had significantly fewer protein spots (384 spots), while both competent larvae and juveniles expressed about 660 protein spots each. Proteins up-regulated during competence identified by MALDI-TOF/TOF analysis included a molecular chaperon (calreticulin), a signal transduction regulator (tyrosin activation protein), and a tissue-remodeling enzyme (metallopeptidase).Conclusions: This was the first time to study the protein expression patterns during the metamorphosis of a marine polychaete and to compare the proteomes of marine invertebrates that have different levels of morphological changes during metamorphosis. The findings provide promising initial steps towards the development of a proteome database for marine invertebrate metamorphosis, thus deciphering the possible mechanisms underlying larval metamorphosis in non-model marine organisms. © 2009 Mok et al; licensee BioMed Central Ltd.

  1. Metal toxicity in a sediment-dwelling polychaete: Threshold body concentrations or overwhelming accumulation rates?

    International Nuclear Information System (INIS)

    Carmen Casado-Martinez, M.; Smith, Brian D.; Luoma, Samuel N.; Rainbow, Philip S.

    2010-01-01

    We followed the net accumulation of As, Cu and Zn in the deposit-feeding polychaete Arenicola marina exposed in the laboratory to natural metal-contaminated sediments, one exposure leading to mass mortality between day 10 and 20, and the other not causing lethality over a period of 60 days of exposure. The worms showed lower total accumulated metal concentrations just before mortality occurred (<20 days) at the lethal exposure, than after 30 days of exposure to sediments not causing mortality. Moreover rates of accumulation of As, Cu and Zn were significantly higher in the lethal exposure than in the sublethal exposure. Our results show that it is not possible to link mortality to a critical total body concentration, and we add to a growing body of literature indicating that metal toxicity occurs when organisms cannot cope with overwhelming influx and subsequent accumulation rates. - Laboratory exposures with the deposit-feeding polychaete Arenicola marina suggest that toxicity is not caused by the accumulated concentration of toxic metals in the body of the animal, but by the rate at which the toxic metal is accumulated.

  2. Larval growth in the dominant polychaete Polydora ciliata is food-limited in a eutrophic Danish estuary (Isefjord)

    DEFF Research Database (Denmark)

    Pedersen, Troels Møller; Almeda, Rodrigo; Fotel, Frank Lech

    2010-01-01

    Food limitation in larval growth of the spionid polychaete Polydora ciliata was examined in a typical eutrophic estuary, Isefjord, in Denmark. In the field, food availability and the energetic requirements of the P. ciliata larval population were measured during 2 different periods in 2004 and 20...

  3. Polychaete response to fresh food supply at organically enriched coastal sites: Repercussion on bioturbation potential and trophic structure

    Science.gov (United States)

    Venturini, N.; Pires-Vanin, A. M. S.; Salhi, M.; Bessonart, M.; Muniz, P.

    2011-12-01

    We investigated the vertical distribution, abundance, specific and functional structure of polychaete assemblages at four organically enriched sites. The effects of fresh organic matter input from the water column driving by upwelling were evaluated. Temperature and salinity values indicate the intrusion of South Atlantic Central Water (SACW) in spring, a nutrient-rich water mass. The dominance of the conveyor belt transport (CONV) in the station influenced by SACW, in the spring survey, is associated with fresh organic matter input as indicated by higher amounts of polyunsaturated fatty acids. Conversely, the predominance of the diffusive mixing (DIFF) bioturbation category, in the sites without SACW influence is related to the preferential accumulation of more refractive food resources as indicated by higher concentrations of short chain saturated fatty acids. At the site influenced by SACW, the changes in polychaete assemblages were not all evident during proceeding upwelling conditions, but may persist at the end of the upwelling. Polychaetes in the study area seemed to be limited by the quality but not the quantity of food. The delay in polychaete response to fresh food supply may be related to the organic enrichment and the prevalence of refractory material in the sediments.

  4. Mechanisms of temporary adhesion in benthic animals

    NARCIS (Netherlands)

    Dodou, D.; Breedveld, P.; Winter, J.C.F.; Dankelman, J.; Leeuwen, van J.L.

    2011-01-01

    Adhesive systems are ubiquitous in benthic animals and play a key role in diverse functions such as locomotion, food capture, mating, burrow building, and defence. For benthic animals that release adhesives, surface and material properties and external morphology have received little attention

  5. Assessing anthropogenic impacts using benthic macroinvertebrate ...

    African Journals Online (AJOL)

    The goal of this study was to establish relationships between benthic macroinvertebrate and common stressor types (siltation, agriculture and paper mill waste) in central highlands of Ethiopia. For analysis environmental variables and benthic invertebrate taxa were collected from four streams from November, 2011 to June, ...

  6. Benthic macroinvertebrate assemblages in mangroves and open ...

    African Journals Online (AJOL)

    Benthic macroinvertebrate assemblages in mangroves and open intertidal areas on the Dar es Salaam coast, Tanzania. ... it is recommended that conservation efforts along the Tanzanian coast should focus here. Keywords: benthic macrofauna, community structure, littoral zone, Tanganyika, Western Indian Ocean ...

  7. Spatial and temporal characteristics of benthic invertebrate communities at Culbin Sands lagoon, Moray Firth, NE Scotland, and impacts of the disturbance of cockle harvesting

    Directory of Open Access Journals (Sweden)

    Vanda Mariyam Mendonça

    2008-06-01

    Full Text Available In the present study, Culbin Sands lagoon, a protected site in NE Scotland, was surveyed every 2 to 4 weeks during a three-year period (1994-1996 to study benthic invertebrate communities. Beds of Mytilus edulis covered 18000 m2. 53 macroinfaunal species were identified outside these areas. The most conspicuous were: the lugworm Arenicola marina (mean up to 55 casts m-2; and bivalves Cerastoderma edule (mean up to 158 ind. m-2 and Macoma balthica (mean up to 79 ind. m-2 after settlement. The standing stock ranged from 20 to 32 g AFDW m-2 yr-1 respectively from more exposed to more sheltered areas. Most species showed a clear recruitment peak in autumn, but others (e.g. Capitella capitata, and Spionidae displayed several peaks in a year. Communities were also compared between the sampling sites before and after an incidental disturbance caused by cockle Cerastoderma edule harvesting, which took place in June 1995. One site showed –0.7% variation in the total standing stock, but +22% for smaller-cockles, as larger filter-feeding cockles were removed therefore enhancing their own larval settlement. Polychaete Spionidae populations also increased after larger cockles were removed. The polychaete Arenicola marina population returned to its normal activities just after the dramatic disturbance of the sediment.

  8. Cellular toxicity and bioaccumulationof silver nanoparticles in the marine polychaete, Nereis diversicolor

    DEFF Research Database (Denmark)

    cong, Yi; Banta, Gary Thomas; Selck, Henriette

    In this study, the toxicities of commercial silver nanoparticles (Ag NPs, 20 and 80 nm) were compared with the toxicities of Ag+ ions in the marine sediment-dwelling polychaete, Nereis diversicolor, after 10 d of sediment exposure, using lysosomal membrane stability (neutral red assay), DNA damage...... of Nereis coelomocytes, which was measured by neutral red retention time (NRRT), decreased in a concentration-dependent manner in all Ag treatments, indicating increased permeability of lysosomal membranes. Comet assay results showed that Ag was able to cause DNA damage in Nereis coelomocytes regardless...... Ag body burdens were 6.79±6.47, 16.94±22.36 and 7.78±13.73 µg/g dw for worms in ionic, 20 nm and 80 nm Ag-treatments, respectively, but there was no significant difference in Ag bioaccumulation among the three treatments. The size of worms (expressed as dry weight) had a significant effect...

  9. Biotransformation of dissolved and sediment-bound fluoranthene in the polychaete, Capitella sp. I

    DEFF Research Database (Denmark)

    Selck, Henriette; Palmqvist, Annemette; Forbes, Valery E.

    2003-01-01

    Polycyclic aromatic hydrocarbons (PAHs) are widely distributed in the marine environment and have physicochemical properties that make them likely to bioaccumulate. The main purpose of this study was to investigate fluoranthene (FLU) uptake, biotransformation and elimination in the deposit......-feeding polychaete Capitella sp. I exposed via different routes. Individual worms were exposed to either dissolved FLU or to both dissolved and sediment-bound FLU. The C-14-FLU was used as a tracer to determine the amounts of unmetabolized FLU (parent), water-soluble (aqueous)- and water-insoluble (polar) FLU...... metabolites and FLU residues (unextractable fraction) in sediment, water, and worm tissue. Capitella was capable of accumulating and biotransforming FLU regardless of route of exposure, thus suggesting that biotransformation activity is not restricted to gut tissues. Although both feeding and nonfeeding worms...

  10. Toxic effects and bioaccumulation of nano-, micron-, and ionic-Ag on the polychaete, Nereis diversicolor

    DEFF Research Database (Denmark)

    Cong, Yi; Banta, Gary Thomas; Selck, Henriette

    2011-01-01

    There is increasing concern about the toxicities and potential risks, both still poorly understood, of silver nanoparticles for the aquatic environment after their eventual release via wastewater discharges. In this study, the toxicities of sediment associated nano (...)- and ionic (AgNO3)- Ag on the sediment-dwelling polychaete, Nereis diversicolor, were compared after 10 days of sediment exposure, using survival, DNA damage (comet assay) and bioaccumulation as endpoints. The nominal concentrations used in all exposure scenarios were 0, 1, 5, 10, 25, and 50 g Ag/g dry......-Ag treatments and at 50 g/g dw in the ionic-Ag treatment compared to the controls (0 g/g dw). The nano-Ag treatment had the greatest genotoxic effect of the three tested Ag forms, and the ionic-Ag treatment was the least genotoxic. N. diversicolor did accumulate sediment-associated Ag from all three forms. Ag...

  11. Characterization of an anthraquinone fluor from the bioluminescent, pelagic polychaete Tomopteris

    Science.gov (United States)

    Francis, Warren R; Powers, Meghan L; Haddock, Steven H D

    2014-01-01

    Tomopteris is a cosmopolitan genus of polychaetes. Many species produce yellow luminescence in the parapodia when stimulated. Yellow bioluminescence is rare in the ocean, and the components of this luminescent reaction have not been identified. Only a brief description, half a century ago, noted fluorescence in the parapodia with a remarkably similar spectrum to the bioluminescence, which suggested that it may be the luciferin or terminal light-emitter. Here, we report the isolation of the fluorescent yellow–orange pigment found in the luminous exudate and in the body of the animals. Liquid chromatography-mass spectrometry revealed the mass to be 270 m/z with a molecular formula of C15H10O5, which ultimately was shown to be aloe-emodin, an anthraquinone previously found in plants. We speculate that aloe-emodin could be a factor for resonant-energy transfer or the oxyluciferin for Tomopteris bioluminescence. PMID:24760626

  12. Swimming behavior and prey retention of the polychaete larvae Polydora ciliata (Johnston)

    DEFF Research Database (Denmark)

    Hansen, B.W.; Jakobsen, Hans Henrik; Andersen, Anders Peter

    2010-01-01

    in specific feeding rates and the observed increase in the difference between upward and downward swimming speeds with larval size. We estimated a critical larval length above which the buoyancy-corrected weight of the larva exceeds the propulsion force generated by the ciliary swimming apparatus and thus......The behavior of the ubiquitous estuarine planktotrophic spionid polychaete larvae Polydora ciliata was studied. We describe ontogenetic changes in morphology, swimming speed and feeding rates and have developed a simple swimming model using low Reynolds number hydrodynamics. In the model we assumed...... that the ciliary swimming apparatus is primarily composed of the prototroch and secondarily by the telotroch. The model predicted swimming speeds and feeding rates that corresponded well with the measured speeds and rates. Applying empirical data to the model, we were able to explain the profound decrease...

  13. An ultrastructural study of oogenesis in the polychaete Nephtys hombergi Savigny

    Science.gov (United States)

    Bentley, M. G.

    1989-06-01

    The polychaete Nephtys hombergi has an annual cycle of reproduction. Ovaries were fixed for electron microscopy during the gametogenic phase from September to March, and during the breeding and post-breeding periol. Oogenesis takes place entirely within the ovary, the integrity of which is maintained by a network of simple follicle cells. Previtellogenic oocytes have close contacts with the peri-vasal cells which surround the genital blood capillaries. These contacts are lost as the oocytes enter vitellogenesis. The vitellogenic oocytes have a cytology typical of oocytes which are thought to undergo autosynthetic production of protein yolk. Biochemical studies would be required to establish whether heterosynthesis of yolk also occurs. As the oocytes proceed through vitellogenesis, cortical material is laid down near the periphery of the oocyte and a microvillous surface is developed. When the microvillous surface is complete the oocytes, by then hormone independent, are ovulated from the ovary and are ready to be spawned.

  14. Distribution, abundance, biomass and diversity of benthic infauna in the Northeast Chukchi Sea, Alaska: Relation to environmental variables and marine mammals

    Science.gov (United States)

    Schonberg, Susan V.; Clarke, Janet T.; Dunton, Kenneth H.

    2014-04-01

    In summer 2009 and 2010, as part of Chukchi Sea Offshore Monitoring in Drilling Area - Chemical and Benthos (COMIDA CAB) program, we performed a quantitative assessment of the biomass, abundance, and community structure of benthic infaunal populations of the Northeastern Chukchi Sea. This analysis documented a benthic species inventory of 361 taxa collected from 142 individual van Veen grab samples (0.1 m-2) at 52 stations. Infaunal abundance was dominated by Polychaeta, Mollusca, and Crustacea. Large concentrations of bivalves (up to 1235 m-2; 920.2 gww m-2) were collected south of Hanna Shoal where flow from two water masses converge and deposit labile carbon to the seafloor, as indicated by low surface sediment C:N ratios. Amphipods (up to 1640 m-2; 26.0 gww m-2), and polychaetes (up to 4665 m-2; 114.7 gww m-2) were documented from multiple stations west of and within Barrow Canyon. This high productivity was most likely due to the "canyon effect", where marine and coastal detrital carbon supplies are channeled by the canyon structure, enhancing carbon deposition and flux, which supports rich benthic communities within the canyon and surrounding areas. To examine the relationships between infaunal distributions of all collected taxa with the physical environment, we used a Biota and Environment matching (BIO-ENV) routine. A combination of water depth, bottom-water temperature and salinity, surface sediment total organic nitrogen (TON) and sediment C:N molar ratios correlated closest with infaunal abundance distribution (ρ=0.54), indicating that multiple factors influence the success of benthic communities. BIO-ENV routines produced similar correlation results when performed on targeted walrus prey items (bivalves (ρ=0.50), polychaetes (ρ=0.53), but gray whale prey items (amphipods) were not strongly correlated to any combination of physical environmental factors (ρ=0.24). Distributions of primary prey items for gray whales (amphipods) and walruses (bivalves

  15. Benthic assemblages of rock pools in northern Portugal: seasonal and between-pool variability

    Directory of Open Access Journals (Sweden)

    Iacopo Bertocci

    2012-11-01

    Full Text Available We investigated the seasonal (winter vs summer and within season and spatial (between-pool variability of benthic assemblages of rock pools at mid-intertidal level along the shore of Viana do Castelo (North Portugal. Physical traits of rock pools, including size, depth and position along the shore, were also compared between pools. While pools did not differ for any of the examined physical traits, results indicated a clear seasonal difference in the structure of assemblages, including a total of 49 macroalgal and 13 animal taxa. This finding was driven by six taxa that are more abundant in winter (the reef-forming polychaete Sabellaria alveolata, the articulated coralline algae Corallina spp., the brown alga Bifurcaria bifurcata, the encrusting coralline alga Lithophyllum incrustans, the red alga Chondracanthus acicularis and the grazing snails Gibbula spp. and four algal taxa that are more abundant in summer (the invasive brown Sargassum muticum, the green Ulva spp., the kelp Laminaria ochroleuca and the filamentous red Ceramium spp.. These data provide a new contribution to the knowledge of rock pool systems and have potential implications for monitoring programmes aimed at assessing ecological modifications related to natural and anthropogenic disturbances and for identifying processes responsible for the variability of rock pool assemblages.

  16. Linking benthic biodiversity to the functioning of coastal ecosystems subjected to river runoff (NW Mediterranean

    Directory of Open Access Journals (Sweden)

    Harmelin–Vivien, M. L.

    2009-12-01

    Full Text Available Continental particulate organic matter (POM plays a major role in the functioning of coastal marine ecosystems as a disturbance as well as an input of nutrients. Relationships linking continental inputs from the Rhone River to biodiversity of the coastal benthic ecosystem and fishery production were investigated in the Golfe du Lion (NW Mediterranean Sea. Macrobenthic community diversity decreased when continen¬tal inputs of organic matter increased, whereas ecosystem production, measured by common sole (Solea solea fishery yields in the area, increased. Decreases in macrobenthic diversity were mainly related to an increasing abundance of species with specific functional traits, particularly deposit-feeding polychaetes. The decrease in macrobenthic diversity did not result in a decrease, but an increase in ecosystem production, as it enhanced the transfer of continental POM into marine food webs. The present study showed that it is necessary to consider functional traits of species, direct and indirect links between species, and feedback loops to understand the effects of biodiversity on ecosystem functioning and productivity.

  17. Benthic decapod crustaceans associated with captures of Munida spp. (Decapoda: Anomura in the Beagle Channel, Argentina

    Directory of Open Access Journals (Sweden)

    Patricia Pérez Barros

    2004-06-01

    Full Text Available Benthic decapod crustacean assemblages in the Beagle Channel are dominated by the galatheid crabs Munidasubrugosa and Munida gregaria. This study deals with the bathymetric and spatial distribution, density and diversity of the assemblage of decapod species that co-occur with Munida spp. in the Beagle Channel. A total of 131 samples were obtained using an epibenthic trawl from February 1999 to December 2000. They were taken monthly from two depth strata separated by the 40 m isobath (range: 4-262 m, and from three different sites: Bahía Lapataia, Ushuaia and Punta Segunda. Sixteen of the 36 recorded species of decapod crustaceans from the Beagle Channel were caught. Munidasubrugosa and M. gregaria contributed 94% to the total decapod material. Of the remaining 6%, Austropandalusgrayi (Caridea was the most abundant species, constituting 43% of the non-galatheid decapod fraction. Some species, namely Paguruscomptus and Eurypodius spp., were characteristic of shallow waters ( 40 m. The average density and diversity of non-galatheid decapods varied with depth and location. Decapod diversity correlated positively with the density of algae and polychaete tubes. The influence of three-dimensional bottom structure on decapod diversity in the Beagle Channel is discussed.

  18. [Benthic macrofauna associated to Thalassia testudinum in Bahía de Mochima, Sucre, Venezuela].

    Science.gov (United States)

    Jiménez Prieto, M; Liñero-Arana, I; Blanco-Rambla, J P; Fermín, J

    2000-12-01

    Diversity and abundance of benthic macrofauna associated to Thalassia testudinum were studied at Ensenada de Reyes, Mochima Bay, in the northeastern coast of Venezuela. Samples were taken monthly in six stations, three at 1 m in depth and three at 6 m, between December 1992 and February 1994, using a quadrat of 0.25 m2 for collecting plants and sediment; each sample was washed with seawater through a 1 mm sieve. The specimens were fixed in 6% formaldehyde. A total of 1722 organisms (6 888 ind x m2) and 127 species of macroinvertebrates were collected. Mollusks dominated with 53 species, followed by polychaetes (40), crustaceans (18) and echinoderms (8). Remaining groups were represented by 1-2 species. The highest abundance was in October (214 specimens), and the lowest in December 1993 (79 specimens). Specific richness was between 47 species in October and 18 in May 1993. Mean species diversity was 2.79-1.36 bits/ind. There were differences (ANOVA p0.05). There were more specimens and species at the lowest depth and in stations with higher Thalassia testudinum biomass.

  19. Effects of bottom fishing on the benthic megafauna of Georges Bank

    Science.gov (United States)

    Collie, J.S.; Escanero, G.A.; Valentine, P.C.

    1997-01-01

    This study addresses ongoing concerns ever the effects of mobile fishing gear on benthic communities. Using side-scan sonar, bottom photographs and fishing records, we identified a set of disturbed and undisturbed sites on the gravel pavement area of northern Georges Bank in the northwest Atlantic. Replicate samples of the megofauna were collected with a 1 m Naturalists' dredge on 2 cruises in 1994. Compared with the disturbed sites, the undisturbed sites had higher numbers of organisms, biomass, species richness and species diversity; evenness was higher at the disturbed sites. Undisturbed sites were characterized by an abundance of bushy epifaunal taxa (bryozoans, hydroids, worm tubes) that provide a complex habitat for shrimps, polychaetes, brittle stars, mussels and small fish. Disturbed sites were dominated by larger, hard-shelled molluscs, and scavenging crabs and echinoderms. Many of the megafaunal species in our samples have also been identified in stomach contents of demersal fish on Georges Bank; the abundances of at feast some of these species were reduced at the disturbed sites.

  20. Effects of the polychaetes Arenicola marina and Nereis diversicolor on microbial pyrene mineralization

    DEFF Research Database (Denmark)

    Timmermann, Karen; Banta, Gary Thomas; Johnsen, Anders R.

    2008-01-01

    The effects of 2 polychaetes, Nereis diversicolor and Arenicola marina, on the microbial mineralization of the organic contaminant pyrene, a polycyclic aromatic hydrocarbon (PAH), were followed over 44 d. We also examined whether the effect of the polychaetes was caused by enhanced oxygen supply,...... by the increased oxygen supply due to burrow construction and irrigation. In contrast, these worms decreased pyrene bioavailability and, hence, counteracted to some extent the stimulating effect of irrigation....

  1. Freshwater springs on intertidal sand flats cause a switch in dominance among polychaete worms

    NARCIS (Netherlands)

    Zipperle, A; Reise, K

    Effects of freshwater seepage on benthic macrofauna were investigated on the sandy tidal flats near the island of Sylt (German Wadden Sea) in 2002. Several permanent seepage areas (50 to 200 m offshore; up to 200 m 2 in area) were examined, in which salinity ranged from 22-29 outside to 0-16 psu

  2. Assessment of Congo red as a fluorescence marker for the exoskeleton of small crustaceans and the cuticle of polychaetes.

    Science.gov (United States)

    Michels, J; Büntzow, M

    2010-05-01

    In this study, the potential of the common dye Congo red as a fluorescence marker for chitin in the exoskeleton of small crustaceans and collagen in the polychaete cuticle was tested. The Congo red staining turned out to be rather efficient and yielded intensively fluorescing structures, which made a very detailed visualization by confocal laser scanning microscopy possible. The excellent results are comparable to those described for the utilization of other efficient fluorescence dyes and intense autofluorescence. The application of Congo red is easy, the fluorescence of this dye is very stable, and the excitation maximum of the structures stained with Congo red is in a range, which is covered by the lasers of most of the confocal laser scanning microscopes. These advantageous properties make the fluorescence staining by Congo red a method of choice for the detailed visualization of the external morphology of small crustaceans and polychaetes.

  3. Testing the saprobity hypothesis in a Mediterranean lagoon: effects of confinement and organic enrichment on benthic communities.

    Science.gov (United States)

    Foti, A; Fenzi, G A; Di Pippo, F; Gravina, M F; Magni, P

    2014-08-01

    The macrobenthic community was compared at four sites characterized by varying degrees of freshwater input, organic enrichment and confinement in the Cabras lagoon (Sardinia, Italy). Three sites, riverine (C1), confined (C2) and seaward (C3), were studied on two dates of summer 2010 and on two dates of winter 2011. A fourth site (C12), representative of the central sector of the Cabras lagoon, was included in this study using the extensive historical datasets at our disposal from previously published work. We aimed to test the hypothesis that (1) the benthos is distributed according to the recently proposed concept of habitat saprobity for coastal lagoons that unifies the Pearson-Rosenberg (sensu organic enrichment) and Guélorget-Perthuisot (sensu confinement) models, and (2) indicator species of different saprobic levels can be identified among dominant species occurring along the saprobity gradient. Salinity was also considered as an additional agent of selection in brackish environments. Irrespective of significant seasonal changes within each site, our results highlighted major environmental and biotic differences between sites. At the northward riverine site (C1), most affected by freshwater input and with limited organic matter (OM) enrichment, Corophium orientale was the single dominant species. The most confined site (C2) was characterized by the highest levels of sedimentary OM and benthic Chlorophyll-a and by mesohaline conditions; the site was inhabited mainly by the halolimnobic Hediste diversicolor and Hydrobia spp. Site C12, characterized by a high OM load and high residence time, was dominated by the opportunistic detritivorous Alitta succinea and Polydora ciliata. At the southernmost seaward site (C3) the considerable seawater renewal, resulting in high salinity (only in summer) and limited OM load, favored a much more diverse macrobenthic assemblage, essentially composed of both marine species, such as Corophium insidiosum, Gammarus aequicauda

  4. Chemosynthetic trophic support for the benthic community at an intertidal cold seep site at Mocha Island off central Chile

    Science.gov (United States)

    Sellanes, Javier; Zapata-Hernández, Germán; Pantoja, Silvio; Jessen, Gerdhard L.

    2011-12-01

    We analyzed C and N stable isotope ratios of benthic fauna and their potential food sources at an intertidal methane seep site and a control site without emanation at Mocha Island (central Chile). The objective was to trace the origin of the main food sources used by the local heterotrophic fauna, based on the hypothesis that chemosynthetic production could be partially fueling the local food web at the seep site. Food sources sampled at both sites included macroalgae, particulate organic matter and bacteria-like filaments found growing over the red algae Gelidium lingulatum within the areas of active methane release. At the control site, located 11 km away from the gas emanation, fauna exhibited moderate δ 13C values ranging from -16.2‰ (in a nereid polychaete) to -14.8‰ (in a cirolanid isopod), which were consistent with those of the potential photosynthetic food sources sampled at this site (-20.2 to -16.5‰). δ 13C values of the photosynthetic food sources at the seep site similarly ranged between -25.4 and -17.9‰. However, a portion of the animals at this site were consistently more 13C-depleted, with δ 13C values close to that of the seeping methane (-43.8‰) and the bacteria-like filaments (-39.2 ± 2.5‰) also collected at this site. Specific examples were the Marphysa sp. polychaetes (δ 13C = -44.7 ± 0.6‰), the Schistomeringos sp. dorvilleid polychaetes (δ 13C = -42.9‰), and the tanaid crustacean Zeuxo marmoratus (δ 13C = -37.3 ± 0.2‰). The significantly higher δ 13C values of the herbivorous gastropod Tegula atra at the seep site (-29.3 ± 3.1‰) than at the control site (-12.6 ± 0.3‰) also indicated differences among sites of the preferred carbon sources of this species. Mixing model estimates indicate that at the seep site bacteria-like filaments could be contributing up to ˜60% of the assimilated diet of selected invertebrates. Furthermore, several indicators of trophic structure, based in isotopic niche metrics, indicate a

  5. Expression of GATA and POU transcription factors during the development of the planktotrophic trochophore of the polychaete serpulid Hydroides elegans.

    Science.gov (United States)

    Wong, Kimberly Suk-Ying; Arenas-Mena, Cesar

    2016-07-01

    The expression of transcription factors with endodermal and mesodermal roles in bilaterians is characterized during the development of Hydroides elegans, a serpulid polychaete with planktotrophic trochophore. GATA 4/5/6 is expressed in endodermal and mesodermal precursors during embryogenesis and in the midgut of trochophore larvae. HeGATA1/2/3a is expressed in animal hemisphere blastomeres 1d121 and 1d122, in dorsal ectoderm and in 4d endomesodermal derivatives that maintain their expression in trochophore larvae. HeGATA1/2/3b is not expressed during embryogenesis, but in several regions of the larva during postembryonic development. During very early gastrulation, Brn1/2/4 is first expressed in cells associated with the prospective oral/foregut side of the blastopore, and during larval development in 4d blastomere descendants. Comparison with orthologs in other metazoans suggests ancestral expression of GATA4/5/6 in the midgut of the last common ancestor of protostomes and deuterostomes. The conserved expression of Brn1/2/4 in the foregut precursors of Hydroides and sea urchins suggests an ancestral role in patterning the tripartite gut of planktotrophic larvae. Broader analysis of these and other regulatory genes reveals variability of developmental gene expression among polychaetes with lecithotrophic larvae, suggesting that they are evolutionarily derived from polychaetes with planktotrophic larvae. © 2016 Wiley Periodicals, Inc.

  6. Physical and biological impact on marine benthic Polychaetes due to dredging in the Mormugao harbour, Goa and its restoration after dredging

    Digital Repository Service at National Institute of Oceanography (India)

    Rathod, V.

    The proportion of gravel in the sediment of the dredged site increased after-dredging, while that of organic matter decreased The impact on community was estimated at species level, using both univariate and multivariate analyses Maximum negative effect...

  7. Aspects of Benthic Biology in Support of HEBBLE (High Energy Benthic Boundary Layer Experiment).

    Science.gov (United States)

    1985-01-08

    not be possible because of the relatively low ambient ATP concentrations (Yingst and Aller, 1980). It should be emphasized that the function of the...sediment microorganisms, meio - and mCroinfauna. A tube dwelling of 0 Amphicteis Ep. an apharetid polychaete and 5 burrow of various configurations...Nowell et al., 1981; -- Rhoads and Boyer, in press) and suggest that the activities of macro-, meio -, and microorganisms are all involved. Little is known

  8. Phosphoproteome analysis during larval development and metamorphosis in the spionid polychaete Pseudopolydora vexillosa

    KAUST Repository

    Chandramouli, Kondethimmanahalli

    2011-05-25

    Background: The metamorphosis of the spionid polychaete Pseudopolydora vexillosa includes spontaneous settlement onto soft-bottom habitats and morphogenesis that can be completed in a very short time. A previous study on the total changes to the proteome during the various developmental stages of P. vexillosa suggested that little or no de novo protein synthesis occurs during metamorphosis. In this study, we used multicolor fluorescence detection of proteins in 2-D gels for differential analysis of proteins and phosphoproteins to reveal the dynamics of post-translational modification proteins in this species. A combination of affinity chromatography, 2D-PAGE, and mass spectrometry was used to identify the phosphoproteins in pre-competent larvae, competent larvae, and newly metamorphosed juveniles. Results: We reproducibly detected 210, 492, and 172 phosphoproteins in pre-competent larvae, competent larvae, and newly metamorphosed juveniles, respectively. The highest percentage of phosphorylation was observed during the competent larval stage. About 64 stage-specific phosphoprotein spots were detected in the competent stage, and 32 phosphoproteins were found to be significantly differentially expressed in the three stages. We identified 38 phosphoproteins, 10 of which were differentially expressed during metamorphosis. These phosphoproteins belonged to six categories of biological processes: (1) development, (2) cell differentiation and integrity, (3) transcription and translation, (4) metabolism, (5) protein-protein interaction and proteolysis, and (6) receptors and enzymes. Conclusion: This is the first study to report changes in phosphoprotein expression patterns during the metamorphosis of the marine polychaete P. vexillosa. The higher degree of phosphorylation during the process of attaining competence to settle and metamorphose may be due to fast morphological transitions regulated by various mechanisms. Our data are consistent with previous studies showing a

  9. Benthic studies in south Gujarat estuaries

    Digital Repository Service at National Institute of Oceanography (India)

    Govindan, K.; Varshney, P.K.; Desai, B.N.

    Benthic biomass and faunal composition in relation to various environmental conditions of the four South Gujarat estuaries namely the Auranga, Ambika, Purna and Mindola were studied and compared. Mean population density of benthos in Auranga, Ambika...

  10. BENTHIC MACROFAUNAL ALIENS IN WILLAPA BAY

    Science.gov (United States)

    Benthic macrofaunal samples were collected at random stations in Willapa Bay, WA, in four habitats [eelgrass (Zostera marina), Atlantic cordgrass (Spartina alterniflora), mud shrimp (Upogebia pugettensis), ghost shrimp (Neotrypaea californiensis)] in 1996 and in seven habitats (Z...

  11. Composition and dynamic of benthic macroinvertebrates community ...

    African Journals Online (AJOL)

    The canonical correspondance analysis (CCA) revealed a strong correlationship between Chironomidae, Syrphidae, Culicidae, Psychodidae, as well as the Pulmonates molluscs and organic nutriments feeding dynamics. These findings showed the sensitivity of benthic macroinvertebrates at different level: sensitivity which ...

  12. Benthic carbonate factories of the Phanerozoic

    NARCIS (Netherlands)

    Schlager, W.

    2003-01-01

    Marine carbonate precipitation occurs in three basic modes: abiotic (or quasi-abiotic), biotically induced, and biotically controlled. On a geologic scale, these precipitation modes combine to form three carbonate production systems, or "factories" in the benthic environment: (1) tropical

  13. Evaluation of some physicochemical parameters and benthic ...

    African Journals Online (AJOL)

    Evaluation of some physicochemical parameters and benthic macroinvertebrates of Ikere Gorge Reservoir in Oyo State, Nigeria. ... Reservoir is relatively under stress due to dominance of indicators of pollution. Keywords: Anthropogenic activities, Bioindicator, Ikere Gorge Reservoir, Melanoides tuberculata, Water quality.

  14. Benthic macroinfaunal community structure, resource utilisation and trophic relationships in two Canadian Arctic Archipelago polynyas.

    Directory of Open Access Journals (Sweden)

    Anni Mäkelä

    Full Text Available Climate change driven alterations to patterns of Arctic marine primary production, with increasing phytoplankton- and decreasing ice algal production, have the potential to change the resource utilisation and trophic structure of the benthic communities relying on the algae for food. To predict the benthic responses to dietary changes, we studied the macroinfaunal community compositions, and used the faunal δ13C and δ15N signatures to investigate their main food sources and trophic positions in North Water (NOW and Lancaster Sound (LS polynyas in the Canadian Arctic Archipelago. Macroinfaunal density (10 952 ind. m-2 and biomass (3190 mg C m-2 recorded in NOW were higher than previously found in the Arctic at depths >500m, and significantly higher than in LS (8355 ind. m-2 and 2110 mg C m-2. This was attributed to higher particulate organic matter fluxes to seafloor in NOW. Polychaetes were significant taxa at both sites in terms of density and biomass, and in addition crustacean density in NOW and bivalve density in LS were high. Facultative filter and surface deposit feeders were highly prevalent at both sites, suggesting feeding plasticity is a successful strategy for accessing different food sources. The macrofaunal δ13C signatures reflected the signatures of pelagic particulate organic matter at the sites, and an isotope mixing model confirmed phytoplankton as the main food source for most taxa and feeding guilds. The food web length in LS was longer than in NOW (3.2 vs. 2.8 trophic levels. This was attributed to a larger reliance on reworked organic matter by the benthic community in LS, whereas the high export fluxes at the highly productive NOW resulted in higher rates of selective consumption of fresh algal matter. Despite studies suggesting that loss of ice algae from consumer diets in the Arctic might have a negative impact on the benthos, this study suggests that Arctic macrobenthic communities thrive using phytoplankton as their

  15. Radiocesium distribution on sea sediment and in benthic organisms in the north-east Japan coast

    Energy Technology Data Exchange (ETDEWEB)

    Ono, Tsuneo; Ambe, Daisuke; Kaeriyama, Hideki; Shigenobu, Yuya; Fujimoto, Ken; Saito, Hajime; Miki, Shiduho; Setou, Takashi; Morita, Takami; Watanabe, Tomowo [National Research Institute of Fisheries Sciences, Fisheries Research Agency, 2-12-4, Fukuura, Kanazawaward, Yokohama, Kanagawa, 236-8648 (Japan); Sawada, Hideki [National Resarch Institute of Fisheries Engineering, Fisheries Research Agency, 7620-7, Hasaki, Kamisu-shi, Ibaraki, 314-0408 (Japan)

    2014-07-01

    seawater) and hence radiocesium are mainly absorbed on organic materials as exchangeable form. High radiocesium concentration in sedimental organic compound makes us fear for the affection to benthic organisms. However, our investigation showed that radiocesium concentration of benthic food organisms (polychaetes, crandons, hermit crabs, etc) for demersal fishes are less than 30 Bq/kg-wet even where organic component of bottom sediment has several tens hundreds Bq/kg-wet. This finding suggests that benthos, as most of which are the osmoconfomers, easily emit their radiocesium to the ambient seawater and do not hold radiocesium derived from their food. (authors)

  16. Effects of acute irradiation on reproductive success of the polychaete worm, Neanthes arenaceodentata

    International Nuclear Information System (INIS)

    Harrison, F.L.; Anderson, S.L.

    1994-01-01

    Effects of acute irradiation on the reproductive success of a relatively low-fecundity species were investigated by exposing pairs of female and male polychaete worms (Neanthes arenaceodentata) to either no radiation (controls) or 0.5, 1.0, 2.0, 5.0, 10 or 50 Gy of acute irradiation (5 Gy min -1 ) at the time when oocytes were visible in the female. The broods from the pairs were sacrificed before hatching occurred, and information was obtained on the number in the brood, the number of normal and abnormal embryos, and the number of embryos that were living, dying and dead. Developing gametes of N. arenaceodentata appeared to be sensitive to acute irradiation. There was a significant reduction in the percentage of live embryos in the broods from pairs receiving doses as low as 0.5 Gy, which is lower than the lowest dose at which effects in invertebrates have been reported previously. This was most likely due to the induction of lethal mutations in the developing gametes, which affected the survival of embryos in early stages of life. Except for those pairs receiving 10 or 50 Gy, there was no evidence of decreased fertility or fecundity or of reduced fertilization success; the number of embryos in the broods from only these irradiated groups was significantly different from the controls. 32 refs., 3 figs., 2 tabs

  17. Development and maturation in the nereidid polychaetes Platynereis dumerilii and Nereis succinea exposed to xenoestrogens.

    Science.gov (United States)

    García-Alonso, J; Ayoola, J A O; Crompton, J; Rebscher, N; Hardege, J D

    2011-09-01

    Few studies link biochemical, cellular and whole animal effects of toxic compounds with growth and reproductive output on invertebrate model organisms. Thus, we explore the effects of xenoestrogens on nereid worms. Larvae of Platynereis dumerilii exposed to estradiol (E(2)) ethynylestradiol (EE(2)) and nonyplhenol (NP) observing the effects on growth, primordial germ cell (PGC) proliferation and maturation. In addition, a single exposure study was performed with a 50 days latency period on adult worms of Nereis succinea. Since reduced glutathione (GSH) is required in detoxification of NP and is the precursor of the spawning pheromone nereithione (CSSG) in N. succinea, we analysed how the estrogenic chemical NP affects GSH concentrations. PGC were not affected by exposure to E(2) and EE(2) from 24hpf to 6 days. Chronic exposure of P. dumerilii with NP over the full life cycle did not influence segment proliferation. Mature females that developed, even at high concentrations, were able to spawn and successful fertilization occurred. However, at high NP levels no P. dumerilii males matured. A significant decline of GSH can be seen in N. succinea males upon treatment with NP, but not in females, indicating that females stabilize GSH levels even in stress situations. This study shows some results that link the foundation to causally integrate toxic exposure to xenoestrogens with development, growth and reproductive outputs in nereidid polychaetes. Copyright © 2011 Elsevier Inc. All rights reserved.

  18. Biosynthesis of Silver Nanoparticles by Marine Invertebrate (Polychaete and Assessment of Its Efficacy against Human Pathogens

    Directory of Open Access Journals (Sweden)

    Reena Singh

    2014-01-01

    Full Text Available Synthesis of metallic nanoparticles by chemical and physical method makes the process often cumbersome due the usage of toxic and expensive chemicals. The present study reports the biosynthesis of silver nanoparticles using marine invertebrate (polychaete extract at room temperature. The ultraviolet-visible (UV-Vis spectroscopy revealed the formation of silver nanoparticles (AgNPs by exhibiting the typical surface plasmon absorption maximum at 418–420 nm. Structure and composition of AgNPs were analyzed by atomic force microscopy (AFM. Average particle size of AgNPs ranged from 40 to 90 nm, confirmed by scanning electron microscopy (SEM analysis. The energy-dispersive X-ray spectroscopy (EDX of the nanoparticles dispersion confirmed the presence of elemental silver signal, whereas X-ray diffraction (XRD substantiated the crystalline nature of synthesized nanoparticle. Fourier transform infrared spectroscopy (FTIR spectral analysis showed the presence of amides phenols, ethers, and fatty acids as major biomolecules responsible for the reduction of silver ions. The possible mechanism responsible for the synthesis of AgNPs by these biomolecules was also illustrated by chemical reactions. The synthesized AgNPs showed comparatively good antibacterial activity against the tested human pathogens. This study advocates that not only plants and microbes but also marine invertebrates do have potential for synthesizing nanoparticles by a cost-effective and eco-friendly approach.

  19. Sediment reworking by a polychaete, Perinereis aibuhitensis, in the intertidal sediments of the Gomso Bay, Korea

    Science.gov (United States)

    Koo, Bon Joo; Seo, Jaehwan

    2017-12-01

    Bioturbation, especially sediment reworking by the activities of macroinvertebrates, such as feeding and burrowing, is one of the major processes that affect the physical, chemical, and biological characteristics of marine sediments. Given the importance of sediment reworking, this study was designed to evaluate the sediment reworking rate of a polychaete, Perinereis aibuhitensis, which is dominant in the upper tidal flats on the west coast of Korea, based on quantification of pellet production during spring and fall surveys. The density of individuals was higher in fall than in spring, whereas, due to a difference in the proportion of adults between the two seasons, the morphometric dimensions of the worm and its pellets were significantly longer and heavier in the spring. Hourly pellet production per inhabitant and density were closely related, with pellet production gradually decreasing as density increased. Daily pellet production was much higher in spring than in fall, mostly due to an increase in daytime production. The sediment reworking rate of Perinereis was similar in the two seasons in which observations were made and depended on its density and the sediment reworking rate per individual. The overall sediment reworking rate of Perinereis was 31 mm yr-1 based on its density in the study area.

  20. Sperm ultrastructure in two species of the polychaete genus Harmothoe (Polynoidae)

    Science.gov (United States)

    Bentley, M. G.; Serries, Katrin

    1992-06-01

    The structure of spermatozoa is described for two species of polynoid polychaete, Harmothoe imbricata and Harmothoe impar, from material fixed and examined by both scanning and transmission electron microscopy. The two species undergo spermiogenesis within discrete testes. The testis of H. imbricata is shown to have a layer of epithelial cells which possess an outer cuticular layer and a microvillous inner surface. Spermatocytes of both species are spherical but there are marked differences in the shape and size of the spermatozoa of the two species. H. impar has a classical primitive spermatozoon with a rounded head (2 μm long) and a button-shaped acrosome. Fully differentiated spermatozoa of H. imbricata are modified from the primitive form by having a long head (10 μm length) with a pointed acrosome about 6 μm in length. Spermatozoa of H. imbricata have a ring of up to fourteen mitochondria around a centrally inserted flagellum at the posterior whereas H. impar has a ring of four or five spherical mitochondria. Spermiogenesis is well synchronised in H. imbricata but all developmental stages can be found simultaneously in the testis of H. impar. The differences in sperm structure of the two species may be related to differences in breeding biology which are hitherto unknown.

  1. 17β-Estradiol induces supernumerary primordial germ cells in embryos of the polychaete Platynereis dumerilii.

    Science.gov (United States)

    Lidke, Anika K; Bannister, Stephanie; Löwer, Andreas M; Apel, David M; Podleschny, Martina; Kollmann, Martin; Ackermann, Christian F; García-Alonso, Javier; Raible, Florian; Rebscher, Nicole

    2014-01-15

    In the polychaete Platynereis dumerilii exactly four primordial germ cells (PGCs) arise in early development and are subject to a transient mitotic arrest until the animals enter gametogenesis. In order to unravel the mechanisms controlling the number of PGCs in Platynereis, we tested whether the steroid 17β-estradiol (E2) is able to induce PGC proliferation, as it had been described in other species. Our data provide strong support for such a mechanism, showing that E2 significantly increases the occurrence of larvae with supernumerary PGCs in Platynereis in a dose dependent manner. E2 responsiveness is restricted to early developmental stages, when the PGCs are specified. During these stages, embryos exhibit high expression levels of the estradiol receptor (ER). The ER transcript localizes to the yolk-free cytoplasm of unfertilized eggs and segregates into the micromeres during cleavage stages. Nuclear ER protein is found asymmetrically distributed between daughter cells. Neither transcript nor protein is detectable in PGCs at larval stages. Addition of the specific estradiol receptor inhibitor ICI-182,780 (ICI) abolishes the proliferative effect of E2, suggesting that it is mediated by ER signaling. Our study reports for the first time an ER mediated proliferative effect of E2 on PGCs in an invertebrate organism. Copyright © 2013 Elsevier Inc. All rights reserved.

  2. Characterization and expression of calmodulin gene during larval settlement and metamorphosis of the polychaete Hydroides elegans

    KAUST Repository

    Chen, Zhangfan

    2012-08-01

    The polychaete . Hydroides elegans (Serpulidae, Lophotrochozoa) is a problematic marine fouling organism in most tropical and subtropical coastal environment. Competent larvae of . H. elegans undergo the transition from the swimming larval stage to the sessile juvenile stage with substantial morphological, physiological, and behavior changes. This transition is often referred to as larval settlement and metamorphosis. In this study, we examined the possible involvement of calmodulin (CaM) - a multifunctional calcium metabolism regulator, in the larval settlement and metamorphosis of . H. elegans. A full-length . CaM cDNA was successfully cloned from . H. elegans (. He-CaM) and it contained an open reading frame of 450. bp, encoding 149 amino acid residues. It was highly expressed in 12. h post-metamorphic juveniles, and remained high in adults. . In situ hybridization conducted in competent larvae and juveniles revealed that . He-CaM gene was continuously expressed in the putative growth zones, branchial rudiments, and collar region, suggesting that . He-CaM might be involved in tissue differentiation and development. Our subsequent bioassay revealed that the CaM inhibitor W7 could effectively inhibit larval settlement and metamorphosis, and cause some morphological defects of unsettled larvae. In conclusion, our results revealed that CaM has important functions in the larval settlement and metamorphosis of . H. elegans. © 2012 Elsevier Inc..

  3. Copper affects biofilm inductiveness to larval settlement of the serpulid polychaete Hydroides elegans (Haswell)

    KAUST Repository

    Bao, Wei Yang

    2010-01-01

    Copper (Cu) contamination is a potential threat to the marine environment due to the use of Cu-based antifouling paints. Cu stress on larval settlement of the polychaete Hydroides elegans was investigated, and this was linked to Cu stress on biofilms and on the biofilm development process. The inductiveness of young biofilms was more easily altered by Cu stress than that of old biofilms, indicating the relative vulnerability of young biofilms. This might result from changes in bacterial survival, the bacterial community composition and the chemical profiles of young biofilms. Cu also affected biofilm development and the chemical high performance liquid chromatograph fingerprint profile. The results indicate that Cu affected larval settlement mainly through its effect on the process of biofilm development in the marine environment, and the chemical profile was crucial to biofilm inductiveness. It is strongly recommended that the effects of environmentally toxic substances on biofilms are evaluated in ecotoxicity bioassays using larval settlement of invertebrates as the end point. © 2010 Taylor & Francis.

  4. Proteomic Changes Associated with Successive Reproductive Periods in Male Polychaetous Neanthes arenaceodentata

    KAUST Repository

    Chandramouli, Kondethimmanahalli

    2015-09-04

    The polychaetous annelid Neanthes acuminata complex has a widespread distribution, with the California population referred to as N. arenaceodentata. The reproductive pattern in this complex is unique, in that the female reproduces once and then dies, whereas the male can reproduce up to nine times. The male incubates the embryos until the larvae leave the male’s tube 21–28 days later and commences feeding. Reproductive success and protein expression patterns were measured over the nine reproductive periods. The percent success of the male in producing juveniles increased during the first three reproductive periods and then decreased, but the number of juveniles produced was similar through all nine periods. iTRAQ based quantitative proteomics were used to analyze the dynamics of protein expression patterns. The expression patterns of several proteins were found to be altered. The abundant expression of muscular and contractile proteins may have affected body weight and reproductive success. Sperm have never been observed; fertilization occurs within the parent’s tube. Proteins associated with sperm maturation and fertilization were identified, including ATPase, clathrin, peroxiredoxins and enolase, which may provide clues to the molecular mechanisms enabling males to reproduce multiple times.

  5. Biodynamic modelling and the prediction of accumulated trace metal concentrations in the polychaete Arenicola marina

    International Nuclear Information System (INIS)

    Casado-Martinez, M. Carmen; Smith, Brian D.; DelValls, T. Angel; Luoma, Samuel N.; Rainbow, Philip S.

    2009-01-01

    The use of biodynamic models to understand metal uptake directly from sediments by deposit-feeding organisms still represents a special challenge. In this study, accumulated concentrations of Cd, Zn and Ag predicted by biodynamic modelling in the lugworm Arenicola marina have been compared to measured concentrations in field populations in several UK estuaries. The biodynamic model predicted accumulated field Cd concentrations remarkably accurately, and predicted bioaccumulated Ag concentrations were in the range of those measured in lugworms collected from the field. For Zn the model showed less but still good comparability, accurately predicting Zn bioaccumulation in A. marina at high sediment concentrations but underestimating accumulated Zn in the worms from sites with low and intermediate levels of Zn sediment contamination. Therefore, it appears that the physiological parameters experimentally derived for A. marina are applicable to the conditions encountered in these environments and that the assumptions made in the model are plausible. - Biodynamic modelling predicts accumulated field concentrations of Ag, Cd and Zn in the deposit-feeding polychaete Arenicola marina.

  6. Characterization of an anthraquinone fluor from the bioluminescent, pelagic polychaete Tomopteris.

    Science.gov (United States)

    Francis, Warren R; Powers, Meghan L; Haddock, Steven H D

    2014-12-01

    Tomopteris is a cosmopolitan genus of polychaetes. Many species produce yellow luminescence in the parapodia when stimulated. Yellow bioluminescence is rare in the ocean, and the components of this luminescent reaction have not been identified. Only a brief description, half a century ago, noted fluorescence in the parapodia with a remarkably similar spectrum to the bioluminescence, which suggested that it may be the luciferin or terminal light-emitter. Here, we report the isolation of the fluorescent yellow-orange pigment found in the luminous exudate and in the body of the animals. Liquid chromatography-mass spectrometry revealed the mass to be 270 m/z with a molecular formula of C(15)H(10)O(5), which ultimately was shown to be aloe-emodin, an anthraquinone previously found in plants. We speculate that aloe-emodin could be a factor for resonant-energy transfer or the oxyluciferin for Tomopteris bioluminescence. © 2014 The Authors. Luminescence published by John Wiley & Sons Ltd.

  7. Long-term impact of bottom trawling on pelagic-benthic coupling in the southern North Sea (German Bight)

    Science.gov (United States)

    Friedrich, Jana; van Beusekom, Justus E. E.; Neumann, Andreas; Naderipour, Celine; Janssen, Felix; Ahmerkamp, Soeren; Holtappels, Moritz; Schueckel, Ulrike

    2016-04-01

    The southern North Sea, and the German Bight, has been systematically bottom-trawled at least since the late 19th century (Christiansen, 2009; Reiss et al., 2009; Kröncke 2011; Emeis et al., 2015, Neumann et al., 2016). As a result, benthic habitats and benthic biogenic structures created by bivalves, polychaetes and hydroids where destroyed or reduced. The parallel removal of hard substrate (gravel and boulders) avoids the resettlement of hard-substrate depended species. For example, the Oyster ground, a huge oyster bank a hundred years ago (Olsen, 1883), turned into a muddy depression today. In addition, shallow depth of max 40 m, strong tidal currents and frequent storms result in a high-energy environment with low sedimentation rates and recurrent sediment resuspension. The decrease in benthic filtering capacity by disturbance in epifauna and bottom roughness (Callaway et al., 2007) apparently influence pelagic-benthic coupling of biogeochemical fluxes. Heip et al. (1995) indicate that benthic respiration at depths prevailing in the German Bight accounts for 10-40% of total respiration, whereas pelagic respiration accounts for 60-90%. Previous estimates are in the middle of this range (Heip et al., 1995). To test these hypotheses and to assess the partitioning of benthic and pelagic processes, and the factors influencing organic matter mineralization, we measured pelagic production and respiration based on Winkler titration, in-situ benthic fluxes using chamber landers, we did ex-situ incubations of intact sediment cores and analysed still images from a towed benthic video sled. In addition, O2 fluxes in permeable sediments were estimated by integrating the volumetric rate measurements of the upper sediment layer over in-situ microsensor-measured O2 penetration depth. Our current results show significant seasonality in benthic respiration, with highest rates in summer and lowest rates in winter. No significant differences in total benthic respiration rates

  8. Benthic foraminiferal biocoenoses in the estuarine regimes of Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Setty, M.G.A.P.

    Benthic Foraminifera are highly responsive to subtle changes in the estuarine environment. Keeping this in view, a qualitative analysis of living benthic Foraminifera was made of the samples collected from the Mandovi-Zuari estuaries...

  9. Infestation of the surf clam Mesodesma donacium by the spionid polychaete Polydora bioccipitalis

    Science.gov (United States)

    Riascos, José M.; Heilmayer, Olaf; Oliva, Marcelo E.; Laudien, Jürgen; Arntz, Wolf E.

    2008-08-01

    The surf clam Mesodesma donacium is an economically important species for Chilean and Peruvian shellfisheries. This clam is often infested by Polydora bioccipitalis, a species belonging to the Spionidae, the most common parasitic polychaete group. To study this association, clams were sampled monthly over a one-year period in northern Chile. Collected clams covered the entire available size range and were classified into four infestation levels in order to study: (1) the relationship between prevalence of infestation ( PI) and host size, (2) the temporal pattern of infestation events related to seasonal temperature changes, and (3) the relationship between infestation, body condition index ( BCI) and gonado-somatic index ( GSI). Additionally, growth rate and digging ability of clams with different infestation levels was studied. A logistic regression model best explained the relationship between PI and host size, with the smallest infested clam being 34 mm long and PI increasing steeply thereafter. Ontogenetic shifts in the habitat of the clam and ontogenetic changes, mainly in shell morphology, seem to explain the sigmoid pattern. Periods of increased shell blistering after infestation by P. bioccipitalis showed a similar seasonal pattern with GSI and BCI of non-infested clams, suggesting either an association between infestation ability and low condition of the clam or common environmental triggers for those factors. Heavily infested clams showed a significant lower BCI, growth rate and digging ability; however, given its low number, they are unlikely to be significant in terms of the local population survival. However, the infestation could play a key role in explaining mass mortality of northern populations during El Niño events, given the latitudinal differences in PI and the fact that infestation ability could be enhanced by increased temperature and facilitated in stressed clams.

  10. Mitochondrial sequence data expose the putative cosmopolitan polychaete Scoloplos armiger (Annelida, Orbiniidae as a species complex

    Directory of Open Access Journals (Sweden)

    Albrecht Sylvia

    2006-06-01

    Full Text Available Abstract Background Polychaetes assigned as Scoloplos armiger (Orbiniidae show a cosmopolitan distribution and have been encountered in all zoogeographic regions. Sibling S. armiger-like species have been revealed by recent studies using RAPDs and AFLP genetic data. We sequenced a ~12 kb fragment of the Scoloplos cf. armiger mitochondrial genome and developed primers for variable regions including the 3' end of the cox3 gene, trnQ, and most of nad6. A phylogenetic analysis of this 528-nucleotide fragment was carried out for S. armiger-like individuals from the Eastern North Atlantic as well as Pacific regions. The aim of this study is to test the cosmopolitan status, as well as to clarify the systematics of this species complex in the Eastern North Atlantic, while using a few specimens from the Pacific Ocean for comparision. Results Phylogenetic analysis of the cox3-trnQ-nad6 data set recovered five different clades of Scoloplos cf. armiger. The fragment of the mitochondrial genome of Scoloplos cf. armiger is 12,042 bp long and contains 13 protein coding genes, 15 of the 22 expected tRNAs, and the large ribosomal subunit (rrnl. Conclusion The sequenced cox3-trnQ-nad6 fragment proved to be very useful in phylogenetic analyses of Scoloplos cf. armiger. Due to its larger sampling scale this study goes beyond previous analyses which used RAPD and AFLP markers. The results of this study clearly supports that Scoloplos armiger represents a species complex and not a cosmopolitan species. We find at least two S. armiger-like species within the Pacific region and three different S. armiger-like species in the North Atlantic. Implications for the taxonomy and the impact on ecological studies are discussed.

  11. The effects of chronic radiation on reproductive success of the polychaete worm Neanthes arenaceodentata

    International Nuclear Information System (INIS)

    Harrison, F.L.; Anderson, S.L.

    1988-12-01

    The effects of lifetime exposure to chronic irradiation on reproductive success were assessed for laboratory populations of the polychaete worm Neanthes arenaceodentata. Lifetime exposure was initiated upon the spawning of the P 1 female and was terminated upon spawning of the F 1 female. Groups of experimental worms received either no radiation (controls) or 0.19, 2.1, or 17 mGy/h. The total dose received by the worms was either background or approximately 0.55, 6.5, or 54 Gy, respectively. The broods from the F 1 mated pairs were sacrificed before hatching occurred, and information was obtained on brood size, on the number of normal and abnormal embryos, and on the number of embryos that were living, dying, and dead. The mean number of embryos in the broods from the F 1 females exposed to lifetime radiation of 0.19 and 2.1 mGy/h was not significantly different from the mean number of embryos from control females; however, the mean number of embryos was different from those F 1 females exposed to 17 mGy/h. There was a significant reduction in the number of live embryos in the broods from the F 1 mated pairs that were exposed to the lowest dose rate given, 0.19 mGy/h, as well as those exposed to 2.1 and 17 mGy/h. Also, increased percentages of abnormal embryos were determined in the broods of all the radiation-exposed groups. 39 refs., 10 figs., 15 tabs

  12. Characterization of a New Ferritin Protein from the Polychaete Chaetopterus Sp.

    Science.gov (United States)

    Hamlish, N.; Deheyn, D.; De Meulenaere, E.

    2016-02-01

    The marine polychaete worm Chaetopterus sp. secretes a sticky mucus that exhibits a soft blue long-lasting bioluminescence. Iron (both ferrous and ferric) and riboflavin have been found abundant in the mucus and identified as potential cofactors involved in the control of the light production. The Deheyn lab has recently identified a novel ferritin protein (ChF) from fractions of the worm mucus still able to produce bioluminescence after purification by chromatography. Ferritin proteins are ubiquitous across the animal kingdom and exhibit ferroxidase activity, converting ferrous iron into a ferric form that is stably stored and soluble in the ferritin. Here, ferritin may serve as a source of biological iron for the worm through a process of iron acquisition, storage, and release during the light production process. This study addresses these options by assessing foundational data that characterize the ferroxidase activity of recombinant ChF with respect to human heavy-chain ferritin (HuHF). ChF exhibits faster initial rates of iron oxidation than HuHF, but reaches an equilibrium state with detectable levels of ferrous iron still in solution; in contrast this was was not observed for HuHF that oxidizes all available iron in solution. This may support the hypothesis that ChF has a reducing activity. This could involve the release of ferric iron, which may be reduced by flavin molecules found in the mucus; the resulting ferrous iron could then subsequently undergo a Fenton reaction, acting as a source of electrons for long-lasting mucus bioluminescence. Word Count: 240

  13. The effects of chronic radiation on reproductive success of the polychaete worm Neanthes arenaceodentata

    Energy Technology Data Exchange (ETDEWEB)

    Harrison, F.L.; Anderson, S.L.

    1988-12-01

    The effects of lifetime exposure to chronic irradiation on reproductive success were assessed for laboratory populations of the polychaete worm Neanthes arenaceodentata. Lifetime exposure was initiated upon the spawning of the P1 female and was terminated upon spawning of the F1 female. Groups of experimental worms received either no radiation (controls) or 0.19, 2.1, or 17 mGy/h. The total dose received by the worms was either background or approximately 0.55, 6.5, or 54 Gy, respectively. The broods from the F1 mated pairs were sacrificed before hatching occurred, and information was obtained on brood size, on the number of normal and abnormal embryos, and on the number of embryos that were living, dying, and dead. The mean number of embryos in the broods from the F1 females exposed to lifetime radiation of 0.19 and 2.1 mGy/h was not significantly different from the mean number of embryos from control females; however, the mean number of embryos was different from those F1 females exposed to 17 mGy/h. There was a significant reduction in the number of live embryos in the broods from the F1 mated pairs that were exposed to the lowest dose rate given, 0.19 mGy/h, as well as those exposed to 2.1 and 17 mGy/h. Also, increased percentages of abnormal embryos were determined in the broods of all the radiation-exposed groups. 39 refs., 10 figs., 15 tabs.

  14. DNA Methylation and Temperature Stress in an Antarctic Polychaete, Spiophanes tcherniai

    Directory of Open Access Journals (Sweden)

    Adam G. Marsh

    2014-05-01

    Full Text Available Epigenetic modifications of DNA and histones are a primary mechanism by which gene expression activities may be modified in response to environmental stimuli. Here we characterize patterns of methyl-cytosine composition in the marine polychaete emph{Spiophanes tcherniai} from McMurdo Sound, Antarctica. We cultured adult worms at two temperatures, -1.5 C (ambient control and +4 C (warm treatment, for four weeks. We observed a rapid capacity for emph{S. tcherniai} organismal respiration rates and underlying catalytic rates of citrate synthase to acclimate at +4 C and return to control levels. We profiled changes in the methylation states of CpG sites in these treatments using an NGS strategy to computationally reconstruct and quantify methylation status across the genome. In our analysis we recovered 120,000 CpG sites in assembled contigs from both treatments. Of those, we were able to align 28,000 CpG sites in common between the two sample groups. In comparing these aligned sites between treatments, only 3,000 (11% evidenced a change in methylation state, but over 85% of changes involved a gain of a 5-methyl group on a CpG site (net increase in methyation. The ability to score CpG sites as partially methylated among gDNA copies in a sample opens up a new avenue for assessing DNA methylation responses to changing environments. By quantitatively distinguishing a ``mixed'' population of copies of one CpG site, we can begin to identify dynamic, non-binary, continuous-response reactions in DNA methylation intensity or density that previously may have been overlooked as noise.

  15. Capitellid connections: contributions from neuromuscular development of the maldanid polychaete Axiothella rubrocincta (Annelida

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    Wanninger Andreas

    2010-06-01

    Full Text Available Abstract Background Numerous phylogenetic analyses on polychaete annelids suggest a taxon Capitellida that comprises the three families Maldanidae, Arenicolidae and Capitellidae. Recent molecular studies support the position of the Echiura, traditionally ranked as a separate phylum, within the capitellids. In order to test the robustness of this molecular-based hypothesis we take a different approach using comparative analyses of nervous and muscle system development in the maldanid Axiothella rubrocincta. Employing immunocytochemistry in combination with confocal laserscanning microscopy, we broaden the database on capitellid organogenesis, thereby incorporating classical histological data in our analysis. Besides assessing possible shared features with the echiurans, we also discuss the variability of neural and muscular characters within the Capitellida. Results The scaffold of the adult central nervous system, which is already established in early developmental stages of Axiothella, consists of cerebral commissures that give rise to simple circumesophageal connectives with fused ventral and dorsal roots and a single ventral neurite bundle. From the latter arise segmental neurites that innervate the peripheral bodywall. Since there is no observable regular pattern, and individual neurites are lost during ontogeny, their exact arrangement remains elusive. The pharynx is encircled by a prominent stomatogastric nerve ring, with a pair of anterior and lateral proboscis neurites directly connecting it to the central nervous system. One pair of ventral and one pair of dorsal longitudinal muscles form the earliest rudiments of the bodywall musculature in late larval stages, while a continuous layer of circular muscles is lacking throughout ontogeny. Conclusions Comparative neurodevelopmental analysis of capitellid and echiuran species reveals several common characters, including simple circumesophageal connectives, a single fused ventral nerve

  16. Characterization of a Novel Spirochete Associated with the Hydrothermal Vent Polychaete Annelid, Alvinella pompejana

    Science.gov (United States)

    Campbell, Barbara J.; Cary, S. Craig

    2001-01-01

    A highly integrated, morphologically diverse bacterial community is associated with the dorsal surface of Alvinella pompejana, a polychaetous annelid that inhabits active high-temperature deep-sea hydrothermal vent sites along the East Pacific Rise (EPR). Analysis of a previously prepared bacterial 16S ribosomal DNA (rDNA) library identified a spirochete most closely related to an endosymbiont of the oligochete Olavius loisae. This spirochete phylotype (spirochete A) comprised only 2.2% of the 16S rDNA clone library but appeared to be much more dominant when the same sample was analyzed by denaturing gradient gel electrophoresis (DGGE) and the terminal restriction fragment length polymorphism procedure (12 to 18%). PCR amplification of the community with spirochete-specific primers used in conjunction with DGGE analysis identified two spirochete phylotypes. The first spirochete was identical to spirochete A but was present in only one A. pompejana specimen. The second spirochete (spirochete B) was 84.5% similar to spirochete A and, more interestingly, was present in the epibiont communities of all of the A. pompejana specimens sampled throughout the geographic range of the worm (13°N to 32°S along the EPR). The sequence variation of the spirochete B phylotype was less than 3% for the range of A. pompejana specimens tested, suggesting that a single spirochete species was present in the A. pompejana epibiotic community. Additional analysis of the environments surrounding the worm revealed that spirochetes are a ubiquitous component of high-temperature vents and may play an important role in this unique ecosystem. PMID:11133434

  17. Biodiversity and biogeographic relationships of the polychaete fauna in French Atlantic and Mediterranean waters

    Directory of Open Access Journals (Sweden)

    Jean-Claude Dauvin

    2006-12-01

    Full Text Available A survey of the literature, including the recent systematic reviews, reveals that 934 polychaete species have been recorded in French Atlantic (including the English Channel and Mediterranean marine waters, including 818 species living on the continental shelf and 116 species that are strictly bathyal. These 934 species belong to 71 families, among which the Syllidae is the most diverse (97 species, followed by the Serpulidae (69 species, Spionidae and Phyllodocidae, each with more than 40 species. Forty-four families have fewer than 10 species recorded in each. The total number of species is spread over 11 continental shelf areas as well as the Atlantic and Mediterranean bathyal depths. In terms of species diversity, the richest areas are the Mediterranean coasts of Provence-Côte d’Azur (507 species and Languedoc-Roussillon (483 species, the western part of the English Channel (402 species, and the southern part of the Bay of Biscay (343 species. The lowest numbers of species were recorded in the eastern English Channel, due to an impoverishment of all the fauna in this part of the Channel. Other areas—for example, the Iroise Sea, the coast of Corsica and Mediterranean bathyal depths—also show low numbers, but this may only reflect the fact that insufficient information about these areas is available. A similarity analysis of 13 areas distinguishes four distinct faunal groups, each specific to one of four general locations: (1 the bathyal Atlantic and Mediterranean zones, including the coast of Corsica, (2 the two Mediterranean coastal areas (Provence-Côte d’Azur and Languedoc-Roussillon, (3 the four zones of the Atlantic continental shelf, and (4 the English Channel. The combined species can be separated into 17 different biogeographic groups.

  18. Polychaete Community of a Marine Protected Area along the West Coast of India—Prior and Post the Tropical Cyclone, Phyan

    Science.gov (United States)

    Kubal, Priti; Mulik, Jyoti; Rokade, M. A.; Salvi, Shailesh; Thomas, Jubin; Naidu, V. S.

    2016-01-01

    Tropical cyclones are extreme random meteorological events that can have profound implications to coastal biodiversities. Given that the frequency, intensity and duration of these events are poised to increase due to the global climate change, understanding the ecological impacts of such erratic occurrences becomes imperative to devise better management strategies. The eventful passage of the tropical cyclone, Phyan, along the northwestern coast of India in November 2009, coupled with the availability of historical data presented a rare opportunity to elucidate the consequences on the polychaete assemblages of the Malvan Marine Sanctuary and their subsequent recovery. This was achieved by comparison of the pre- and post-Phyan seasonal data from four different sites in and around the Sanctuary. MDS analyses and polychaete community parameters suggested conspicuous cyclone related effects on the polychaete community characteristics in the three outer stations off Malvan, whereas the relatively protected bay station remained more or less unscathed. Impacts, attributable to the cyclone apart from seasonal variations, included changes in polychaete composition, reductions in total polychaete density, species diversity, evenness and functional groups. Dominance of the opportunistic polychaete, Paraprionospiopatiens was all pervasive just after Phyan, resulting in poor diversity and evenness values. In the outer stations, diverse feeding modes present prior to the cyclone were replaced by microphagous feeders post the disturbance. However, the study also observed complete recovery as substantiated by the improvement inpolychaete density, diversity indices and re-instatement of multiple feeding guilds in affected areas. This resilience of the coastal waters off Malvan is attributed to its marine protected status, implying that reduced human interference aided rapid revival of damaged ecosystems. PMID:27556895

  19. Polychaete Community of a Marine Protected Area along the West Coast of India-Prior and Post the Tropical Cyclone, Phyan.

    Science.gov (United States)

    Sukumaran, Soniya; Vijapure, Tejal; Kubal, Priti; Mulik, Jyoti; Rokade, M A; Salvi, Shailesh; Thomas, Jubin; Naidu, V S

    2016-01-01

    Tropical cyclones are extreme random meteorological events that can have profound implications to coastal biodiversities. Given that the frequency, intensity and duration of these events are poised to increase due to the global climate change, understanding the ecological impacts of such erratic occurrences becomes imperative to devise better management strategies. The eventful passage of the tropical cyclone, Phyan, along the northwestern coast of India in November 2009, coupled with the availability of historical data presented a rare opportunity to elucidate the consequences on the polychaete assemblages of the Malvan Marine Sanctuary and their subsequent recovery. This was achieved by comparison of the pre- and post-Phyan seasonal data from four different sites in and around the Sanctuary. MDS analyses and polychaete community parameters suggested conspicuous cyclone related effects on the polychaete community characteristics in the three outer stations off Malvan, whereas the relatively protected bay station remained more or less unscathed. Impacts, attributable to the cyclone apart from seasonal variations, included changes in polychaete composition, reductions in total polychaete density, species diversity, evenness and functional groups. Dominance of the opportunistic polychaete, Paraprionospiopatiens was all pervasive just after Phyan, resulting in poor diversity and evenness values. In the outer stations, diverse feeding modes present prior to the cyclone were replaced by microphagous feeders post the disturbance. However, the study also observed complete recovery as substantiated by the improvement inpolychaete density, diversity indices and re-instatement of multiple feeding guilds in affected areas. This resilience of the coastal waters off Malvan is attributed to its marine protected status, implying that reduced human interference aided rapid revival of damaged ecosystems.

  20. Polychaete Community of a Marine Protected Area along the West Coast of India-Prior and Post the Tropical Cyclone, Phyan.

    Directory of Open Access Journals (Sweden)

    Soniya Sukumaran

    Full Text Available Tropical cyclones are extreme random meteorological events that can have profound implications to coastal biodiversities. Given that the frequency, intensity and duration of these events are poised to increase due to the global climate change, understanding the ecological impacts of such erratic occurrences becomes imperative to devise better management strategies. The eventful passage of the tropical cyclone, Phyan, along the northwestern coast of India in November 2009, coupled with the availability of historical data presented a rare opportunity to elucidate the consequences on the polychaete assemblages of the Malvan Marine Sanctuary and their subsequent recovery. This was achieved by comparison of the pre- and post-Phyan seasonal data from four different sites in and around the Sanctuary. MDS analyses and polychaete community parameters suggested conspicuous cyclone related effects on the polychaete community characteristics in the three outer stations off Malvan, whereas the relatively protected bay station remained more or less unscathed. Impacts, attributable to the cyclone apart from seasonal variations, included changes in polychaete composition, reductions in total polychaete density, species diversity, evenness and functional groups. Dominance of the opportunistic polychaete, Paraprionospiopatiens was all pervasive just after Phyan, resulting in poor diversity and evenness values. In the outer stations, diverse feeding modes present prior to the cyclone were replaced by microphagous feeders post the disturbance. However, the study also observed complete recovery as substantiated by the improvement inpolychaete density, diversity indices and re-instatement of multiple feeding guilds in affected areas. This resilience of the coastal waters off Malvan is attributed to its marine protected status, implying that reduced human interference aided rapid revival of damaged ecosystems.

  1. Long-term dynamics (1990 to 2004 of the polychaete fauna from the sublittoral soft-bottoms off Punta Coloso (Antofagasta, northern Chile

    Directory of Open Access Journals (Sweden)

    Franklin D. Carrasco

    2006-12-01

    Full Text Available Long-term monitoring (1990 to 2004 at four stations (50 to 60 m depth off Punta Coloso, Antofagasta, northern Chile, has allowed us to study temporal changes in the sublittoral macrobenthic polychaete infauna composition and abundance. The numerical contribution of the polychaete fraction to the total fauna was high (65 to 93%, whereas biomass was smaller and variable (20 to 85%. The number of invertebrate species collected per cruise was relatively low (40 to 90 species and the number of polychaete species ranged from 18 to 37 per cruise (mean = 29.9, with a cumulative number of 56 polychaete species. The most abundant species collected included the small-sized Aricidea pigmentata Carrasco (26.5%, Magelona phyllisae Jones (22.7%, Paraprionospio pinnata (Ehlers (13.5%, Tharyx longisetosa Hartmann-Schröder (12.1%, and Prionospio peruana Hartmann-Schröder (11.8%. Clear general patterns or tendencies are not seen in temporal variations of polychaete fauna nor when analyzing the seasons individually. P. pinnata was the only dominant species to show a general tendency in abundance fluctuations. Although the study period included two El Niño events (1991-1992 and 1997-1998, a clear dynamic was not seen in either abundance or dominant species. The analyzed data validate or corroborate high stability or persistence over time that has been suggested for polychaete fauna in the study area. Such stability or persistence exists in spite of high seasonal variability and interannual fluctuations in the region’s oceanographic conditions.

  2. Udbredelse af den invasive polychaete Marenzelleria spp. i danske farvande samt effekten på sedimentmiljøet

    DEFF Research Database (Denmark)

    Christoffersen, Kenn L; Banta, Gary Thomas

    Sjælland mangler stadig, men forventes foretaget før mødet. På mødet præsenteres foreløbig data om Marenzellerias udbredelse og sedimentkarakteristika.. [1] Blank M., Laine A.O., Jürss K. and Bastrop R. 2007. Molecular identification key based on PCR/RFLP for three polychaete sibling species of the genus...... Marenzelleria, and the species’ current distribution in the Baltic Sea. Helgol Mar Res (2008) 62: 129-141....

  3. Deposition and benthic mineralization of organic carbon

    DEFF Research Database (Denmark)

    á Nordi, Gunnvør; Glud, Ronnie N.; Simonsen, Knud

    2018-01-01

    Seasonal variations in sedimentation and benthic mineralization of organic carbon (OC) were investigated in a Faroese fjord. Deposited particulate organic carbon (POC) was mainly of marine origin, with terrestrial material only accounting for b1%. On an annual basis the POC export fromthe euphotic...... resuspension during winter. The POC export from the euphotic zone could not sustain the benthic mineralization rate (10.8 mol C m−2 yr−1) and the calculated burial rate (9.8 mol C m−2 yr−1) of organic material in the central basin. This indicated considerable focusing ofmaterial in the central part...... of the fjord. Thiswas supported by the fact that themeasured benthic mineralization rate – in contrast to most investigations – actually increased with increasing water depth. In August,whenmineralization was at its maximum, the dissolved inorganic carbon (DIC) release from the sediment increased by 2.2mmolm−2...

  4. Spatial distribution maps for benthic communities

    DEFF Research Database (Denmark)

    Sørensen, Per S.

    1999-01-01

    simulation, Markov random fields and Boolean models. Geostatistical simulation provides a means of assessing the variability of random field functionals such as the estimated distribution area of a benthic species. The Markov random field allows the spatial distribution of the benthic communities...... to be modelled as a less smooth or regular phenomena than assumed when using geostatistical models. The use of Markov random fields in a Markov chain Monte Carlo simulation framework enables an alternative means of assessing variability of image functionals that is based on a sound theoretical basis......-scan sonar for mapping of benthic communities remains an open task to be studied in the future. The data processing methodology developed is a contribution to the emerging field of hydroacoustic marine biology. The method of penalised maximum pseudo-likelihood for estimation of the Ising model under a huge...

  5. Bioturbation activity of three macrofaunal species and the presence of meiofauna affect the abundance and composition of benthic bacterial communities.

    Science.gov (United States)

    Lacoste, Élise; Piot, Adeline; Archambault, Philippe; McKindsey, Christopher W; Nozais, Christian

    2018-05-01

    Given concerns of increasing rates of species extinctions, the relationship between biodiversity and ecosystem functioning has become a major research focus over the past two decades. Many studies have shown that biodiversity per se (e.g. species richness) or species-specific traits may be good predictors of changes in ecosystem function. Although numerous studies on this subject have focused on terrestrial systems, few have evaluated benthic marine systems. We used the Limecola balthica community as a model to test whether the number or identity of three well-studied macrofaunal species influence the sediment bacterial compartment, which drives important biogeochemical processes and influence ecosystem functioning. We also investigated the poorly known role of meiofauna in the interactions between macrofauna and bacteria. Eight combinations of 0-3 species were maintained in microcosms for 34 days in the presence or absence of meiofauna. The abundance and composition of the bacterial community, defined by the relative percentage of cells with a high (HNA) vs low (LNA) nucleic acid content, were measured. Species identity of macrofauna was a better indicator of changes in the microbial compartment than was species richness per se. In particular, the gallery-diffuser behaviour of the polychaete Alitta virens likely induced strong changes in sediment physical and geochemical properties with a major impact on the bacterial compartment. Moreover, the presence of meiofauna modulated the influence of macrofauna on bacterial communities. This study provides evidence that species identity provides greater explanatory power than species richness to predict changes in the bacterial compartment. We propose that multi-compartment approaches to describe interactions amongst different size classes of organisms and their ecological roles should be further developed to improve our understanding of benthic ecosystem functioning. Copyright © 2018 Elsevier Ltd. All rights reserved.

  6. On the benthic molluscs of Banco Inglés (Río de la Plata, Uruguay

    Directory of Open Access Journals (Sweden)

    Carranza, A.

    2007-12-01

    Full Text Available We describe the specific richness and community structure of benthic molluscs on a shallow-water sandy bank (Banco Inglés in the Río de la Plata estuary. From a total of 25 macroinvertebrate taxa collected, that included one ophiuroid, one bryozoan, fourcrustaceans and four polychaete species, molluscs were the dominant taxon, with 15 species recorded. These were one species of Polyplacophora, eight Bivalvia and six Gastropoda (one exotic, representing 11families and 11 genera. In terms of mean relative abundance, the molluscan assemblage was dominated by the deposit-feeder bivalve Corbula caribaea, averaging ca. 30% of the individuals of the macroinfauna. The alien species Rapana venosa was noted in two stations, represented by one and four specimens. We used null model analysis to test for nonrandomness in the structure of the molluscan communities of the area. The analysis supported the null hypothesis that co-occurrence patterns could not be distinguished from those that might arise by random processes.

  7. Tissue distribution and histopathological effects of dietary methylmercury in benthic grubby Myoxocephalus aenaeus

    Energy Technology Data Exchange (ETDEWEB)

    Pelletier, E.; Audet, C. [Rimouski Oceanographic Center, Quebec (Canada)

    1995-05-01

    There is a need to test deterministic models predicting the behavior and effects of chemicals on aquatic systems by conducting experiments with more than one trophic step at a time. This approach requires the set-up of an experimental food chain in pounds or mesocosm facilities which can be used for dietary uptake studies and assessment of sublethal stress induced by contaminated food. In the course of our current research program at the INRS marine mesocosms facilities, a model benthic food chain including inter- and sub-tidal species such as the mussel (Mytilus edulis), clam (Mya arenaria), starfish (Leptasterias polaris), polychaete (Nereis virens), amphipod (Gammarus sp.), gastropod (Buccinum undatum), and fishes (Pleuronectec americanus, Myoxocephalus aenaeus), is used for testing food uptake models and for the development of sublethal toxicity tests which could be used in the environmental assessment of coastal and estuarine waters. Among these test organisms, the grubby (M. aenaeus) is a small coastal fish (12-15 cm) characterized by a broad head. The grubby is tolerant of water temperature and salinity variations and lives on a wide variety of bottom strata at low depths. The grubby is carnivorous and consumes a wide variety of molluscs and the young of many species of fish. Because of its size, its estuarine and coastal distribution and its large spectrum of prey, this species was seen as an ideal fish to fit into our experimental food chain model. This paper reports a preliminary experiment designed to measure distribution of mercury in tissues and to test the response of various histopathological and biochemical stress indicators in grubby exposed to dietary contamination by methylmercury (MeHg) for a 20-day exposure period. MeHg was chosen because it is rapidly bioaccumulated by most living organisms and its toxicity has been studied for decades in numerous aquatic ecosystems. 17 refs., 2 tabs.

  8. A Survey of the Benthic Macrofauna and Fish Species Assemblages ...

    African Journals Online (AJOL)

    Overall, five out of a total of 13 genera found are intolerant to pollution and four moderately tolerant, while four comprising polychaetes and the midge Chironomus, are pollution tolerant. This suggests that the mangrove habitat is less polluted. A grand total of 917 fish specimens, belonging to 15 species and nine families, ...

  9. Restoration of Benthic Macro-endofauna after Reforestation of ...

    African Journals Online (AJOL)

    Oligochaetes dominated the natural and 10-year reforested sites, but in higher densities at the former. Polychaetes and nemertines dominated the 5-year reforested and degraded sites. PCA, MDS and ANOSIM indicated clear differences in physical characteristics of the sediment and macrofaunal composition between the ...

  10. Coastal Benthic Optical Properties (CoBOP): Optical Properties of Benthic Marine Organisms and Substrates

    National Research Council Canada - National Science Library

    Mazel, Charles

    2002-01-01

    ...). The long-term objective of our research is to gain an understanding of the nature and significance of fluorescence and reflectance characteristics of benthic marine organisms in general, and coral...

  11. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: South Florida: BENTHIC (Benthic Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains benthic habitats, including coral reef and hardbottom, seagrass, algae, and others in [for] South Florida. Vector polygons in the data set...

  12. The Bering Strait Region: A Window into Changing Benthic Populations in Response to Varying Subarctic-Arctic Connectivity and Ecosystem Dynamics

    Science.gov (United States)

    Grebmeier, J. M.; Cooper, L. W.; Moore, S. E.

    2016-02-01

    A key ecological organizing principle for the northern Bering Sea and the adjoining southern Chukchi Sea just north of Bering Strait is that the shallow, seasonally productive waters lead to strong pelagic-benthic coupling to the sea floor, with deposition of fresh chlorophyll coinciding with the spring bloom as sea ice retreats. Both in situ production and advection of upstream phytodetritus to these regions support persistent biological hotspots that connect benthic prey to upper trophic benthivores. This northern marine ecosystem is dominated by marine macroinvertebrates (e.g. clams, polychaetes, sipunculids, and amphipods) that feed on the high production deposited rapidly to the seafloor, which in turn serve as food resources for diving mammals and seabirds, such as gray whales, bearded seals, eiders, and walruses. Between St. Lawrence Island and Bering Strait and northwards into the Chukchi Sea, the persistence of seasonal sea ice has significantly declined over the past two decades, and along with warming seawater temperatures, these changes have potential ramifications to ecosystem structure. Times-series data over the last 25 years indicate that these regions have experienced a northward shift in macrofaunal composition and a decline in core benthic biomass that matches patterns of reduced sea ice, warming seawater, and changing sediment grain size that relates to varying current patterns. This presentation will discuss these data in the context of both process studies from the region and results from the Distributed Biological Observatory (DBO), an international network of time series transects that is providing a framework to evaluate status and trends on a latitudinal bases in the Pacific Arctic region.

  13. Experimental evidence of site specific preferential processing of either ice algae or phytoplankton by benthic macroinfauna in Lancaster Sound and North Water Polynyas, Canada

    Science.gov (United States)

    Mäkelä, Anni; Witte, Ursula; Archambault, Philippe

    2016-04-01

    Rapid warming is dramatically reducing the extent and thickness of summer sea ice of the Arctic Ocean, changing both the quantity and type of marine primary production as the longer open water period favours phytoplankton growth and reduces ice algal production. The benthic ecosystem is dependent on this sinking organic matter for source of energy, and ice algae is thought to be a superior quality food source due to higher essential fatty acid content. The resilience of the benthos to changing quality and quantity of food was investigated through sediment incubation experiments in the summer 2013 in two highly productive Arctic polynyas in the North Water and Lancaster Sound, Canada. The pathways of organic matter processing and contribution of different organisms to these processes was assessed through 13C and 15N isotope assimilation into macroinfaunal tissues. In North Water Polynya, the total and biomass specific uptake of ice algal derived C and N was higher than the uptake of phytoplankton, whereas an opposite trend was observed in Lancaster Sound. Polychaetes, especially individuals of families Sabellidae and Spionidae, unselectively ingested both algal types and were significant in the overall organic matter processing at both sites. Feeding preference was observed in crustaceans, which preferentially fed on ice algae at Lancaster Sound, but preferred phytoplankton in North Water Polynya. Bivalves also had a significant role in the organic matter processing overall, but only showed preferential feeding on phytoplankton at Lancaster Sound polynya. Overall the filter feeders and surface deposit feeders occupying lowest trophic levels were responsible for majority of the processing of both algal types. The results provide direct evidence of preferential resource utilisation by benthic macrofauna and highlight spatial differences in the processes. This helps to predict future patterns of nutrient cycling in Arctic sediments, with implications to benthic

  14. Propensity to metal accumulation and oxidative stress responses of two benthic species (Cerastoderma edule and Nephtys hombergii): are tolerance processes limiting their responsiveness?

    KAUST Repository

    Marques, Ana

    2016-02-24

    The chronic exposure of benthic organisms to metals in sediments can lead to the development of tolerance mechanisms, thus diminishing their responsiveness. This study aims to evaluate the accumulation profiles of V, Cr, Co, Ni, As, Cd, Pb and Hg and antioxidant system responses of two benthic organisms (Cerastoderma edule, Bivalvia; Nephtys hombergii, Polychaeta). This approach will provide clarifications about the ability of each species to signalise metal contamination. Organisms of both species were collected at the Tagus estuary, in two sites with distinct contamination degrees (ALC, slightly contaminated; BAR, highly contaminated). Accordingly, C. edule accumulated higher concentrations of As, Pb and Hg at BAR compared to ALC. However, antioxidant responses of C. edule were almost unaltered at BAR and no peroxidative damage occurred, suggesting adjustment mechanisms to the presence of metals. In contrast, N. hombergii showed a minor propensity to metal accumulation, only signalising spatial differences for As and Pb and accumulating lower concentrations of metals than C. edule. The differences in metal accumulation observed between species might be due to their distinctive foraging behaviour and/or the ability of N. hombergii to minimise the metal uptake. Despite that, the accumulation of As and Pb was on the basis of the polychaete antioxidant defences inhibition at BAR, including CAT, SOD, GR and GPx. The integrated biomarker response index (IBRv2) confirmed that N. hombergii was more affected by metal exposure than C. edule. In the light of current findings, in field-based studies, the information of C. edule as a bioindicator should be complemented by that provided by another benthic species, since tolerance mechanisms to metals can hinder a correct diagnosis of sediment contamination and of the system’s health. Overall, the present study contributed to improve the lack of fundamental knowledge of two widespread and common estuarine species, providing

  15. Polychaete Annelid (segmented worms) Species Composition in the Deep Gulf of Mexico following the Deep Water Horizon (DWH) Oil Spill

    Science.gov (United States)

    QU, F.; Rowe, G.

    2012-12-01

    Sediments 5 to 9 km from the Deep Water Horizon (DWH) Oil Spill site were sampled using a 0.2 m2 box corer 5 months after the event to assess the effects of the oil spill on polychaete annelid (segmented worms) community structure. Numbers of species, abundance, and biodiversity indices were all significantly lower than pre-spill values from similar depths in the eastern Gulf of Mexico (GoM). All of the five dominant species were different. Non-selective deposit feeders and selective deposit feeders were still the most frequent feeding guilds, but their abundances decreased significantly after the event. A large number of carnivorous Sigalionidae may be a response to an accumulation of PAHs on the sediment. Multivariate analyses (CLUSTER and multidimensional scaling (MDS)) illustrate the differences between assemblages near the DWH and those from prior studies in similar deep GoM habitats. In sum, the polychaete populations appeared to be at an early stage of succession in the recovery from the spill or they could be a resident assemblage that is the natural characteristic infauna in or adjacent to natural seeps of fossil hydrocarbons.

  16. Measurement and modeling of polychlorinated biphenyl bioaccumulation from sediment for the marine polychaete neanthes arenaceodentata and response to sorbent amendment

    Science.gov (United States)

    Janssen, E.M.-L.; Croteau, M.-N.; Luoma, S.N.; Luthy, R.G.

    2010-01-01

    Bioaccumulation rates of polychlorinated biphenyls (PCBs) for the marine polychaete Neanthes arenaceodentata were characterized, including PCB uptake rates from water and sediment, and the effect of sorbent amendment to the sediment on PCB bioavailability, organism growth, and lipid content. Physiological parameters were incorporated into a biodynamic model to predict contaminant uptake. The results indicate rapid PCB uptake from contaminated sediment and significant organism growth dilution during time-series exposure studies. PCB uptake from the aqueous phase accounted for less than 3% of the total uptake for this deposit-feeder. Proportional increase of gut residence time and assimilation efficiency as a consequence of the organism's growth was assessed by PCB uptake and a reactor theory model of gut architecture. Pulse-chase feeding and multilabeled stable isotope tracing techniques proved high sediment ingestion rates (i.e., 6?10 times of dry body weight per day) indicating that such deposit-feeders are promising biological indicators for sediment risk assessment. Activated carbon amendment reduced PCB uptake by 95% in laboratory experiments with no observed adverse growth effects on the marine polychaete. Biodynamic modeling explained the observed PCB body burdens for N. arenaceodentata, with and without sorbent amendment. ?? 2009 American Chemical Society.

  17. The effect of the dominant polychaete Scolelepis squamata on nematode colonisation in sandy beach sediments: An experimental approach

    Science.gov (United States)

    Maria, Tatiana F.; Esteves, André M.; Vanaverbeke, Jan; Vanreusel, Ann

    2011-09-01

    The effect of an abundant sandy beach polychaete, Scolelepis squamata, on the colonisation of defaunated sediments by marine nematodes indicates that sandy beach fauna can be partially controlled by biological interactions within and across size groups. Experimental cores, equipped with windows allowing infaunal colonisation, were filled with defaunated sandy beach sediment containing two different treatments with and without S. squamata. These cores were inserted into microcosms filled with sediment with indigenous meiofauna collected from the field. The treatments were incubated in the laboratory at ambient temperature and salinity for 2, 7, 14 and 21 days, in order to follow the colonisation process of the defaunated sediments by the indigenous nematode fauna over time. Nematodes initially colonised both treatments, with abundances of up to 10% of the densities in the control; after 2 weeks, nematode densities in the cores without S. squamata surpassed the control densities. Nematode assemblages in both treatments were not species rich, and also differed in composition from the natural assemblages. The most successful colonising species, Enoplolaimus litoralis, was rare in the surrounding sediment, suggesting that colonisation was determined by species-specific characteristics such as body size, motility and feeding strategy. Initially the presence of macrofauna did not affect the nematode community composition, but after 2 weeks of the experiment, the presence of the polychaete seemed to facilitate the earlier establishment of non-opportunistic species.

  18. Proteomic Changes between Male and Female Worms of the Polychaetous Annelid Neanthes arenaceodentata before and after Spawning

    KAUST Repository

    Chandramouli, Kondethimmanahalli

    2013-08-30

    The Neanthes acuminata species complex (Polychaeta) are cosmopolitan in distribution. Neanthes arenaceodentata, complex, has been widely used as toxicological test animal in the marine environment. Method of reproduction is unique in this polychaete complex. Same sexes fight and opposite sexes lie side by side until egg laying. Females lose about 75% of their weight and die after laying eggs. The male, capable of reproducing up to nine times, fertilizes the eggs and incubates the embryos for 3-4 weeks. The objective of this study was to determine if there is any set of proteins that influences this unique pattern of reproduction. Gel-based two-dimensional electrophoresis (2-DE) and gel-free quantitative proteomics methods were used to identify differential protein expression patterns before and after spawning in both male and female N. arenaceodentata. Males showed a higher degree of similarity in protein expression patterns but females showed large changes in phosphoproteme before and after spawning. There was a decrease (about 70%) in the number of detected phosphoproteins in spent females. The proteins involved in muscular development, cell signaling, structure and integrity, and translation were differentially expressed. This study provides proteomic insights of the male and female worms that may serve as a foundation for better understanding of unusual reproductive patterns in polychaete worms. © 2013 Chandramouli et al.

  19. Nucleotide sequences of ribosomal internal transcribed spacers and their utility in distinguishing closely related Perinereis polychaets (Annelida; Polychaeta; Nereididae).

    Science.gov (United States)

    Chen, Chaolun Allen; Chen, Chang-Po; Fan, Tung-Yung; Yu, Jr-Kai; Hsieh, Hwey-Lian

    2002-01-01

    Nucleotide sequences of a segment of the rRNA transcription unit spanning from the 3' end of the 18S rDNA to the 5' end of 28S rDNA were determined for four species of Perinereis polychaetes: P. aibuhitensis, P. floridana, and two undescribed species, Perinereis sp1 and sp2. The 5.8S rDNA sequences are identical among the four species. Intraspecific variability was low with the Kimura 2-parameter (K2P) distance, ranging from 0 to 0.0138 for ITS1 and 0 to 0.0247 for ITS2. The interspecific nucleotide difference was significantly higher than those within species, with a mean K2P of 0.172 for ITS1 and 0.204 for ITS2, suggesting that comparisons of ITS regions can be used to evaluate the phylogenetic relationships among Perinereis species. Both neighbor-joining and parsimony analyses of ITS variability indicate a close relationship between the two undescribed species of Perinereis. These findings highlight the utility of the ITS sequence in conjunction with other morphological and ecological characters to delineate species boundaries among closely related polychaetes.

  20. Intertidal benthic macrofauna of rare rocky fragments in the Amazon region

    Directory of Open Access Journals (Sweden)

    Gisele Cavalcante Morais

    2014-03-01

    Full Text Available Rock fragment fields are important habitat for biodiversity maintenance in coastal regions, particularly when located in protected areas dominated by soft sediments. Researches in this habitat have received surprisingly little attention on the Amazon Coast, despite rock fragments provide refuges, nursery grounds and food sources for a variety of benthic species. The present survey describes the mobile macroinvertebrate species composition and richness of the intertidal rocky fragments in Areuá Island within the “Mãe Grande de Curuçá” Marine Extractive Reserve (RESEX on the Brazilian Amazon Coast. Samples were collected during the dry (August and November 2009 and rainy seasons (March and May 2010 on the upper and lower intertidal zone, using a 625cm² quadrat. At each season and intertidal zone, macroinvertebrate samples were collected along four transects (20m each parallel to the waterline, and within each transect two quadrats were randomly sampled. Macroinvertebrates were identified, density determined, and biomass values obtained to characterize benthic diversity from the rocky fragments. The Jackknife procedure was used to estimate species richness from different intertidal zones during the dry and rainy seasons. Macrofaunal community comprised 85 taxa, with 17 “unique” taxa, 40 taxa were common to both intertidal zones and seasons, and 23 taxa have been recorded for the first time on the Brazilian Amazon Coast. Species richness was estimated at 106±9.7 taxa and results suggest that sampling effort was representative. Polychaeta was the most dominant in species number, followed by Malacostraca and Gastropoda. Regarding frequency of occurrence, Crustacean species Dynamenella tropica, Parhyale sp. and Petrolisthes armatus were the most frequent representing >75% of frequency of occurrence and 39 taxa were least frequent representing <5% of frequency of occurrence. Occurrence of crustaceans and polychaetes were particularly

  1. Assessment of mercury bioavailability to benthic macroinvertebrates using diffusive gradients in thin films (DGT).

    Science.gov (United States)

    Amirbahman, Aria; Massey, Delia I; Lotufo, Guilherme; Steenhaut, Nicholas; Brown, Lauren E; Biedenbach, James M; Magar, Victor S

    2013-10-01

    Mercury-specific diffusive gradient in thin films (DGTs) were used in laboratory microcosms as a biomonitoring tool to assess the lability of mercury (Hg) total and monomethylmercury Hg (MeHg), and to develop a relationship between chemical lability and bioavailability in estuarine sediments. Time-series deployment of DGTs in sediments showed that sediment-bound MeHg is more labile than sediment-bound inorganic Hg. In subsequent experiments, DGTs were deployed simultaneously with three benthic macroinvertebrates (the estuarine amphipod, Leptocheirus plumulosus; the estuarine polychaete, Nereis virens; and the marine clam, Macoma nasuta) in sediments for up to 55 days. All organisms and their co-deployed DGTs exhibited an initial period of rapid Hg uptake followed by slower uptake reaching apparent steady state. Strong correlative relationships were generally observed between paddle-type DGTs and macroinvertebrate tissue data (r(2) between 0.57 and 0.97). Further, %MeHg:Total Hg ratios for M. nasuta and N. virens (38.5 ± 12.2 and 19.2 ± 5.2) were similar to their corresponding ratios for the DGTs (33.1 ± 13.3 and 24.4 ± 11.0), and they were significantly higher than the same ratios for sediment (2.9 ± 0.3) and pore water (8.5 ± 4.9). The %MeHg:Total Hg ratios for L. plumulosus (68.5 ± 6.2) were significantly higher than those for the DGTs. This may be because the tissue and DGT data for this organism were not truly co-located as L. plumulosus burrows close to the sediment surface, and the DGTs sampled the sediment surface. Overall, our results suggest that for benthic macroinvertebrates in estuarine sediments studied here, (a) sediment MeHg is more bioavailable than inorganic Hg, (b) sediment and pore-water concentration measurements are not good predictors for the extent of bioaccumulation of Hg species, and (c) DGTs are an effective biomonitoring tool for the assessment of bioavailability of Hg species.

  2. Benthic macroinvertebrate assemblage composition and distribution ...

    African Journals Online (AJOL)

    Benthic macroinvertebrates were sampled and environmental variables measured at Langeni Forest and Kambi Valley, two sites of varying degrees of human impact in the upper Mthatha River, South Africa, in 2010–2011. Four species, Simulium adersi Pomeroy, Baetis harrisoni Barnard, Pseudocloeon sp. and Tricorythus ...

  3. Benthic carbon mineralization in hadal trenches

    DEFF Research Database (Denmark)

    Wenzhöfer, F.; Oguri, K.; Middelboe, Mathias

    2016-01-01

    Hadal trenches are considered to act as depo-centers for organic material at the trench axis and host unique and elevated biomasses of living organisms as compared to adjacent abyssal plains. To explore the diagenetic activity in hadal trench environments we quantified in situ benthic O-2 consump...

  4. Microplastic effect thresholds for freshwater benthic macroinvertebrates

    NARCIS (Netherlands)

    Redondo Hasselerharm, P.E.; Dede Falahudin, Dede; Peeters, E.T.H.M.; Koelmans, A.A.

    2018-01-01

    Now that microplastics have been detected in lakes, rivers and estuaries all over the globe, evaluating their effects on biota has become an urgent research priority. This is the first study that aims at determining the effect thresholds for a battery of six freshwater benthic macroinvertebrates

  5. Benthic macrofauna community composition, abundance and ...

    African Journals Online (AJOL)

    The communities of the shallow, intermediate and deep environments were composed mainly of molluscs, worms and insects. Gastropods (52.68%) and bivalves (40.18%) constituted the major part of the benthic community. Bellamya unicolor, Melanoides tuberculata and Coelatura spp. were the most abundant molluscs.

  6. Benthic freshwater nematode community dynamics under conditions ...

    African Journals Online (AJOL)

    Studies of the influence of fish aquaculture on benthic freshwater nematode assemblages are scarce, but could provide a way of gauging environmental effects. The abundance and diversity of nematode assemblages in response to Oreochromis niloticus aquaculture were investigated in Kafr El-Sheikh Governorate, Egypt, ...

  7. Occurrence, abundance and distribution of benthic ...

    African Journals Online (AJOL)

    Occurrence, abundance and distribution of benthic macroinvertebrates in the Nyando River catchment, Kenya. ... measures are required to safeguard the environment and ecosystems of Lake Victoria. Keywords: biodiversity index, environmental monitoring, Lake Victoria Basin, species distribution, water quality, Winam Gulf ...

  8. Metal concentrations in water column, benthic macroinvertebrates ...

    African Journals Online (AJOL)

    Concentrations of some metals in the water, benthic macroinvertebrates and the muscle tissue of the Nile tilapia from river Delimi, Nigeria were investigated from January 1998 to June 1998. Samplings were done monthly at 3 different sites. The concentrations of the metals were determined using the atomic absorption ...

  9. Variation in benthic macroinvertebrate assemblages in Ologe ...

    African Journals Online (AJOL)

    The community structure, diversity and seasonal variation of the benthic macroinvertebrates in Ologe Lagoon were studied at four sites during the dry and wet seasons of 2003 to provide environmental baseline data for the lagoon. The community comprised 29 taxa from the phyla Insecta, Annelida, Mollusca, and Crustacea ...

  10. Evaluation of benthic macroinvertebrate assemblage for disturbance ...

    Indian Academy of Sciences (India)

    Home; Journals; Journal of Earth System Science; Volume 122; Issue 4. Evaluation of benthic macroinvertebrate assemblage for disturbance zonation in urban rivers using multivariate analysis: Implications for river management. Ram Devi Tachamo Shah Deep Narayan Shah. Volume 122 Issue 4 August 2013 pp 1125- ...

  11. Lake Ontario benthic prey fish assessment, 2015

    Science.gov (United States)

    Weidel, Brian C.; Walsh, Maureen; Holden, Jeremy P.; Connerton, Michael J.

    2016-01-01

    Benthic prey fishes are a critical component of the Lake Ontario food web, serving as energy vectors from benthic invertebrates to native and introduced piscivores. Since the late 1970’s, Lake Ontario benthic prey fish status was primarily assessed using bottom trawl observations confined to the lake’s south shore, in waters from 8 – 150 m (26 – 492 ft). In 2015, the Benthic Prey Fish Survey was cooperatively adjusted and expanded to address resource management information needs including lake-wide benthic prey fish population dynamics. Effort increased from 55 bottom trawl sites to 135 trawl sites collected in depths from 8 - 225m (26 – 738 ft). The spatial coverage of sampling was also expanded and occurred in all major lake basins. The resulting distribution of tow depths more closely matched the available lake depth distribution. The additional effort illustrated how previous surveys were underestimating lake-wide Deepwater Sculpin, Myoxocephalus thompsonii, abundance by not sampling in areas of highest density. We also found species richness was greater in the new sampling sites relative to the historic sites with 11 new fish species caught in the new sites including juvenile Round Whitefish, Prosopium cylindraceum, and Mottled sculpin, Cottus bairdii. Species-specific assessments found Slimy Sculpin, Cottus cognatus abundance increased slightly in 2015 relative to 2014, while Deepwater Sculpin and Round Goby, Neogobius melanostomus, dramatically increased in 2015, relative to 2014. The cooperative, lake-wide Benthic Prey Fish Survey expanded our understanding of benthic fish population dynamics and habitat use in Lake Ontario. This survey’s data and interpretations influence international resource management decision making, such as informing the Deepwater Sculpin conservation status and assessing the balance between sport fish consumption and prey fish populations. Additionally a significant Lake Ontario event occurred in May 2015 when a single

  12. Superficial sediments and their relation to polychaete families in a subtropical embayment, Mexico

    Directory of Open Access Journals (Sweden)

    Nuria Méndez

    1998-06-01

    Full Text Available The soft bottoms in front of Mazatlan Bay and "Isla de la Piedra" Peninsula were studied to produce maps (depth, grain size and organic matter content in sediments. Sixty samples were obtained with a 30 x 30 van Veen grab (4-21 m depth and polychaetewere extracted from 21 subsamples. Grain size ranged from -1.05 phi (gravel to 3.81 phi (very fine sand, with fine sand predominating. Organic matter content in sediment was 0.91-3.06 % (most values = 1-2 %. Thirty polychaete families (905 individuals/m2 in mean were found, and Cirratulidae, Spionidae, Onuphidae, and Pilargiidae were dominant. Pearson's correlation of grain size, organic matter and depth proved significant (pSe realizó una caracterización de los fondos blandos de la bahía de Mazatlán y de la Península "Isla de la Piedra" a través de mapas de profundidad, tamaño de grano y materia orgánica en sedimentos. Se recolectaron 60 muestras entre 4 y 21 m de profundidad con una draga van Veen de 30 x 30 cm. De estas 60 muestras, se recolectó sedimento en 21 localidades para el estudio de las familias de poliquetos. El tamaño de grano de los sedimentos osciló entre 1.82 phi (arena mediana y 3.81 phi (arena muy fina, dominando la arena fina. El contenido de materia orgánica varió entre 0.91 y 3.06 %, siendo los valores comprendidos entre 1 y 2 %, los más frecuentes. En total se recolectaron 30 familias de poliquetos (905 individuos/m2 en promedio, de las cuales Cirratulidae, Spionidae, Onuphidae y Pilargiidae resultaron dominantes. Los valores de correlación de Pearson entre el tamaño de grano, la materia orgánica y la profundidad resultaron significativos (p<0.01; p<0.02, lo que confirma las relaciones observadas en los patrones de distribución a lo largo del área de estudio. El análisis de componentes principales mostró la asociación de varias familias con la profundidad (factor 1, con el tamaño de grano (factor 2 y con la materia orgánica (factor 3. Sin embargo, se

  13. Nitrous Oxide Production by Abundant Benthic Macrofauna

    DEFF Research Database (Denmark)

    Stief, Peter; Schramm, Andreas

    screened more than 20 macrofauna species for nitrous oxide production and identified filter-feeders and deposit-feeders that occur ubiquitously and at high abundance (e.g., chironomids, ephemeropterans, snails, and mussels) as the most important emitters of nitrous oxide. In contrast, predatory species...... and temperature. Given the increasing nitrate pollution of freshwater ecosystems, the collective gut of benthic macrofauna might constitute an increasingly important yet hitherto overlooked link in the global nitrous oxide budget....

  14. Biofouling likely serves as a major mode of dispersal for the polychaete tubeworm Hydroides elegans as inferred from microsatellite loci.

    Science.gov (United States)

    Pettengill, J B; Wendt, D E; Schug, M D; Hadfield, M G

    2007-01-01

    The polychaete tubeworm Hydroides elegans (Haswell) is a biofouling species with relatively limited larval dispersal. Four highly polymorphic microsatellite loci were used to make inferences about the migration and global population structure of 137 individuals from seven sub-populations located in the Atlantic, Pacific, and Indian Oceans and in the Mediterranean Sea. The results of the genetic analyses suggest minimal population sub-structure (F(st) = 0.09). Estimates of pairwise F(st) and migration rates using the coalescent-based method of MIGRATE suggest that there is little genetic differentiation between certain populations. Variation in relatedness among pairs of populations is consistent with a suite of local and global factors. The most likely explanation for close genetic relatedness among certain populations over such vast distances is the regular and consistent transport of adults and larvae on the hulls and in the ballast water of ships, respectively.

  15. Drilling Predation on Serpulid Polychaetes (Ditrupa arietina) from the Pliocene of the Cope Basin, Murcia Region, Southeastern Spain

    Science.gov (United States)

    Martinell, Jordi; Kowalewski, Michał; Domènech, Rosa

    2012-01-01

    We report quantitative analyses of drilling predation on the free-living, tube-dwelling serpulid polychaete Ditrupa arietina from the Cope Cabo marine succession (Pliocene, Spain). Tubes of D. arietina are abundant in the sampled units: 9 bulk samples from 5 horizons yielded ∼5925 specimens of D. arietina. Except for fragmentation, tubes were well preserved. Complete specimens ranged from 3.1 to 13.4 mm in length and displayed allometric growth patterns, with larger specimens being relatively slimmer. Drilled Ditrupa tubes were observed in all samples. Drillholes, identified as Oichnus paraboloides, were characterized by circular to elliptical outline (drillhole eccentricity increased with its diameter), parabolic vertical profile, outer diameter larger than inner diameter, penetration of one tube wall only, narrow range of drill-hole sizes, and non-random (anterior) distribution of drillholes. A total of 233 drilled specimens were identified, with drilling frequencies varying across horizons from 2.7% to 21% (3.9% for pooled data). Many tube fragments were broken across a drillhole suggesting that the reported frequencies are conservative and that biologically-facilitated (drill-hole induced) fragmentation hampers fossil preservation of complete serpulid tubes. No failed or repaired holes were observed. Multiple complete drillholes were present (3.9%). Drilled specimens were significantly smaller than undrilled specimens and tube length and drill-hole diameter were weakly correlated. The results suggest that drillholes were produced by a size-selective, site-stereotypic predatory organism of unknown affinity. The qualitative and quantitative patterns reported here are mostly consistent with previous reports on recent and fossil Ditrupa and reveal parallels with drilling patterns documented for scaphopod mollusks, a group that is ecologically and morphologically similar to Ditrupa. Consistent with previous studies, the results suggest that free-dwelling serpulid

  16. Aspects on gametogenesis, fertilization and embryogenesis of two deep-sea polychaetes from Eastern Atlantic cold seeps

    Science.gov (United States)

    Gaudron, S. M.; Hourdez, S.; Olu, K.

    2017-11-01

    We investigated two gonochoristic species of annelid polychaetes (one siboglinid and one polynoid) from cold seeps that ranged from 525 m to 3300 m in depth (Guiness, Worm Hole and Regab pockmarks) on the Gabon and Congo continental margins (Gulf of Guinea). Different aspects of gametogenesis (oocyte diameter, presence of ovisac, spermatozoa shape, and fecundity), fertilization (in vitro fertilization experiments: IVF) and embryogenesis (cleavage rate) were studied. The sampled siboglinid was a new species of Lamellibrachia and the second population of this genus in the Eastern Atlantic. Mean oocyte diameter was about 100 μm and fully-grown primary oocytes were stored in an ovisac, as in other studied siboglinids. The presence of a single spermatozoon was noted within an oviduct, indicating a possible internal fertilization. The rate of cell division at 6 °C was one cleavage every 20 h. Embryos developed normally to the blastula stage after 5-d post-fertilization at atmospheric pressure suggesting some pressure tolerance. The second polychaete was the scale-worm Branchipolynoe cf. seepensis that lives in commensalism in the mantle cavity of Bathymodiolus aff. boomerang. Anatomical reproductive features were similar to those described in B. seepensis from hydrothermal vents on Mid-Atlantic Ridge, with lecithotrophic larval development and continuous gametogenesis. We performed the first IVF carried out on gametes for any deep-sea polynoid species. Fertilization and development occurred but a number of abnormalities were observed demonstrating a limitation to embryogenesis at atmospheric pressure. The rate of cell division was three times faster at 8 °C than at 4 °C with a maximum stage of 8-cells reached after 72 h post-fertilization. We surprisingly observed some oocytes from the negative seawater control during IVF experiments cleaved to the 2-cell stage, demonstrating the possible occurrence of internal fertilization prior to IVF experiment or the accidental

  17. Effect of settled diatom‐aggregates on benthic nitrogen cycling

    OpenAIRE

    Marzocchi, Ugo; Thamdrup, Bo; Stief, Peter; Glud, Ronnie N.

    2017-01-01

    Abstract The marine sediment hosts a mosaic of microhabitats. Recently it has been demonstrated that the settlement of phycodetrital aggregates can induce local changes in the benthic O2 distribution due to confined enrichment of organic material and alteration of the diffusional transport. Here, we show how this microscale O2 shift substantially affects benthic nitrogen cycling. In sediment incubations, the settlement of diatom‐aggregates markedly enhanced benthic O2 and NO 3 − consumption a...

  18. Polymorphism in Developmental Mode and Its Effect on Population Genetic Structure of a Spionid Polychaete, Pygospio elegans

    NARCIS (Netherlands)

    Kesaniemi, Jenni E.; Geuverink, Elzemiek; Knott, K. Emily

    Population genetic structure of sedentary marine species is expected to be shaped mainly by the dispersal ability of their larvae. Long-lived planktonic larvae can connect populations through migration and gene flow, whereas species with nondispersive benthic or direct-developing larvae are expected

  19. Benthic fauna of Kakinada bay and backwaters, east coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Rathod, V.; Ansari, Z.A.; Parulekar, A.H.

    Quantitative distribution of macro and meiofauna from Kakinada Bay and backwaters was studied. Total macrofauna abundance (no.m/2) ranged from 67 to 116 and 94 to 186 in the backwaters and near-shore environment respectively. Polychaetes...

  20. Benthic macro and meiofauna of seagrass (Thalassia hemprichii) bed at Minicoy, Lakshadweep

    Digital Repository Service at National Institute of Oceanography (India)

    Ansari, Z.A.

    Macrofauna, comprising 9 groups, was dominated by polychaete worms, while meiofauna, comprising 10 groups, was dominated by nematodes Densities of both macro and meiofauna were higher near the shore where biomass of Thalassia hemprichii was maximum...

  1. Polychaetes from the northern part of the Sea of Marmara with the description of a new species of Polydora (Annelida: Polychaeta: Spionidae

    Directory of Open Access Journals (Sweden)

    M. E. ÇINAR

    2015-09-01

    Full Text Available Soft-bottom material collected from the northern part of the Sea of Marmara (off Küçükçekmece included a total of 67 species belonging to 24 polychaete families. Three species (Brania pusilla, Lysidice cf. margaritacea and Sabellaria spinulosa are new records for the Sea of Marmara. Three alien species (Polydora cornuta, Prionospio pulchra and Pseudopolydora paucibranchiata were found at the shallow-water stations. Different polychaete assemblages occurred in the area and the mud percentage of sediment and salinity were the main factors related to their distribution. A new Polydora species, which is mainly characterized in having brownish pigmentation solely on the antero-dorsal sides of the body, and falcate major spines with only a bulge (anterior ones or with a bulge and a small tooth, is described.

  2. Alien freshwater polychaetes Hypania invalida (Grube 1860 and Laonome calida Capa 2007 in the Upper Odra River (Baltic Sea catchment area

    Directory of Open Access Journals (Sweden)

    Pabis Krzysztof

    2017-01-01

    Full Text Available Two polychaete species, Hypania invalida and Laonome calida, were found in the Upper Odra River in 2016. Both species were recorded close to a natural river bank down to 1 m depths. They inhabited sandy-gravelly and sandy-muddy sediments. H. invalida is an alien invasive Ponto-Caspian species, previously known in Poland from the Odra River estuary only. Our results may indicate a further rapid dispersal of H. invalida upstream the Odra River or an accidental introduction. This study is the first record of L. calida in the Baltic Sea catchment. This Australian species has been recently introduced into Europe. Prior to this study, it had been reported from Dutch rivers only. The present data suggest accidental introduction of the species to European rivers; however, our findings show an urgent need for a close monitoring of the polychaete in Europe.

  3. Benthic macroinvertebrates in Italian rice fields

    Directory of Open Access Journals (Sweden)

    Daniela Lupi

    2013-02-01

    Full Text Available Rice fields can be considered man-managed temporary wetlands. Five rice fields handled with different management strategies, their adjacent channels, and a spring were analysed by their benthic macroinvertebrate community to i evaluate the role of rice agroe- cosystem in biodiversity conservation; ii find indicator species which can be used to compare the ecological status of natural wetlands with rice agroecosystems; and iii find the influence of environmental variables on biodiversity. Different methods of data analysis with increasing degree of complexity – from diversity index up to sophisticated multivariate analysis – were used. The investigation provided a picture of benthic macroinvertebrates inhabiting rice agroecosystems where 173 taxa were identified, 89 of which detected in rice paddies. Among them, 4 phyla (Mollusca, Annelida, Nematomorpha, and Arthropoda, 8 classes (Bivalvia, Gastropoda, Oligochaeta, Hirudinea, Gordioida, Insecta, Branchiopoda, and Malacostraca, 24 orders, 68 families, 127 genera and 159 species have been found. Ten threatened and 3 invasive species were detected in the habitats examined. The information obtained by the different methods of data analysis allowed a more comprehensive view on the value of the components of rice agroecosystems. Data analyses highlighted significant differences between habitats (feeding channel and rice field, with higher diversity observed in channels, and emphasised the role of the water chemical-physical parameters. The period of water permanence in rice fields resulted to be only one of the factors influencing the community of benthic macroinvertebrates. The presence of rare/endangered species allowed characterising some stations, but it was less informative about management strategies in rice paddies because most of these species were absent in rice fields.

  4. Impact of Hypoxia on the Community Structure of Benthic ...

    African Journals Online (AJOL)

    Study of the Lagos lagoon was conducted for two years to investigate the impact of hypoxia on the benthic macroinvertebrates. Water and benthic samples were collected monthly along the study stretch and analysed in a standard laboratory. Temporal variation in water physico-chemistry was largely controlled by rainfall ...

  5. Impact of Effluents on Water Quality and Benthic Macroinvertebrate ...

    African Journals Online (AJOL)

    A study on the impact of effluent discharge on water quality and the benthic macro invertebrate fauna of the Awba stream and reservoir was carried out between April 2007 and May 2008. Benthic macro invertebrate and sediment samples were collected with a Van Veen grab, while physico-chemical parameters were ...

  6. Species diversity variations in Neogene deep-sea benthic ...

    Indian Academy of Sciences (India)

    climatic turnovers. Some species of benthic foraminifera are sensitive to changes in water mass proper- ties whereas others are sensitive to organic fluxes and deep-sea oxygenation. Benthic faunal diversity has been found closely linked to food web, bottom water oxygen levels, and substrate and water mass sta- bility.

  7. Assessment of benthic molluscs diversity and distribution in urban ...

    African Journals Online (AJOL)

    The urban reservoirs n° 2 and n°3 of Ouagadougou, located in the middle of the city are subject to multiple anthropogenic pressures which threaten the diversity of benthic macroinvertebrates community group like molluscs. This study was initiated to assess the diversity and distribution of benthic molluscs in these ...

  8. Species diversity variations in Neogene deep-sea benthic ...

    Indian Academy of Sciences (India)

    Some species of benthic foraminifera are sensitive to changes in water mass properties whereas others are sensitive to organic fluxes and deep-sea oxygenation. Benthic faunal diversity has been found closely linked to food web, bottom water oxygen levels, and substrate and water mass stability. The present study is ...

  9. Polychaete zonation on sandy beaches of São Sebastião Island, São Paulo State, Brazil

    Directory of Open Access Journals (Sweden)

    Margarete de O. Reis

    2000-01-01

    Full Text Available This study was performed in the intertidal zone of Barra Velha, Perequê, and Engenho d'Água beaches, located on São Sebastião Island (São Paulo State, Brazil, to assess the composition, abundance, and zonation of the polychaete community in the intertidal zone. Four structurally different sectors were established, two on Barra Velha (I and lI, one on Perequê, and one on Engenho d'Água. Each sector was divided into 3 tidal levels (lower, middle, and upper, in which 5 or 6 random samples were taken seasonally using a corer of 0.01 m2 in area. Laeonereis acuta, Capitella capitata, and Heteromastus filiformis dominated in the upper tidal levels, and Scoloplos (Leodamas sp. and Cirriformia tentaculata in the lower levels. The structural complexity of Engenho d'Água, caused by rocky fTagments mixed with sand, supported the richest and most diverse polychaete fauna of ali the sectors. The salinity of the interstitial water and the organic matter content were the principal factors related to the zonation patterns at these sites.Este trabalho foi realizado na região entremarés das praias Barra Velha, Perequê e Engenho d'Água, situadas na Ilha de São Sebastião (Estado de São Paulo, Brasil, com o objetivo de estudar a composição, abundância e zonação da taxocenose dos poliquetas. Quatro setores estruturalmente diferentes foram delimitados, sendo dois na Barra Velha (I e II, um no Perequê e um no Engenho d'Água. Cada setor foi dividido em 3 níveis entremarés (inferior, intermediário e superior, nos quais 5-6 amostras aleatórias foram tomadas sazonalmente utilizando um delimitador com 0,01 m2 de área. Laeonereis acuta, Capitella capitata e Heteromastus filiformis ocorreram predominantemente nos níveis superiores e Scoloplos (Leodamas sp. e Cirriformia tentaculata nos inferiores. A complexidade estrutural do Engenho d' Água, caracterizado por fragmentos rochosos misturados ao sedimento, sustentou a fauna de poliquetas mais rica e

  10. Bioassessment of Choghakhor Wetland using Benthic Macroinvertebrates

    Directory of Open Access Journals (Sweden)

    P. Fathi

    2016-05-01

    Full Text Available In present study, besides investigating benthic communities and their demographics in Choghakhor wetland, the water quality has been evaluated and classified. Then, 10 stations were selected and sampling of benthos was done every 45 days since April 2010 to March 2011, with 3 replications at each station. Samples were obtained by Ekman grab Sampler (surface 400 cm2. The collected samples were separated and fixed by formalin (4%. The Macroinvertebrates samples were identified and counted in laboratory. Generally 25 families of benthic macroinvertebrates belonging to 5 classes and 12 orders were identified. The results were calculated as community measures, including total richness, Shannon - Wiener diversity index and Hilsenhoff Biological index at family level. The results obtained from temporal and spatial changes of data (Statgeraphics software and water qualitative classification using Shannon diversity index conformed to biological Hilsenhoff index. And finally, water quality of wetland was assessed to be polluted in average to high level. According to this study findings, it seems that, these indicators could be used as useful tools for evaluating water supplies quality.

  11. Benthic macroinvertebrate field sampling effort required to ...

    Science.gov (United States)

    This multi-year pilot study evaluated a proposed field method for its effectiveness in the collection of a benthic macroinvertebrate sample adequate for use in the condition assessment of streams and rivers in the Neuquén Province, Argentina. A total of 13 sites, distributed across three rivers, were sampled. At each site, benthic macroinvertebrates were collected at 11 transects. Each sample was processed independently in the field and laboratory. Based on a literature review and resource considerations, the collection of 300 organisms (minimum) at each site was determined to be necessary to support a robust condition assessment, and therefore, selected as the criterion for judging the adequacy of the method. This targeted number of organisms was collected at all sites, at a minimum, when collections from all 11 transects were combined. Subsequent bootstrapping analysis of data was used to estimate whether collecting at fewer transects would reach the minimum target number of organisms for all sites. In a subset of sites, the total number of organisms frequently fell below the target when fewer than 11 transects collections were combined.Site conditions where <300 organisms might be collected are discussed. These preliminary results suggest that the proposed field method results in a sample that is adequate for robust condition assessment of the rivers and streams of interest. When data become available from a broader range of sites, the adequacy of the field

  12. Bar-tailed

    NARCIS (Netherlands)

    Duijns, S.; Hidayati, N.A.; Piersma, T.

    2013-01-01

    Capsule Across the European wintering range Bar-tailed Godwits Limosa lapponica lapponica selected polychaete worms and especially Ragworms Hediste diversicolor, with differences between areas due to variations in prey availability.Aims To determine the diet of Bar-tailed Godwits across their

  13. Multi-generational responses of a marine polychaete to a rapid change in seawater pCO2.

    Science.gov (United States)

    Rodríguez-Romero, Araceli; Jarrold, Michael D; Massamba-N'Siala, Gloria; Spicer, John I; Calosi, Piero

    2016-10-01

    Little is known of the capacity that marine metazoans have to evolve under rapid p CO 2 changes. Consequently, we reared a marine polychaete, Ophryotrocha labronica , previously cultured for approximately 33 generations under a low/variable pH regime, under elevated and low p CO 2 for six generations. The strain used was found to be tolerant to elevated p CO 2 conditions. In generations F1 and F2 females' fecundity was significantly lower in the low p CO 2 treatment. However, from generation F3 onwards there were no differences between p CO 2 treatments, indicating that trans-generational effects enabled the restoration and maintenance of reproductive output. Whilst the initial fitness recovery was likely driven by trans-generational plasticity (TGP), the results from reciprocal transplant assays, performed using F7 individuals, made it difficult to disentangle between whether TGP had persisted across multiple generations, or if evolutionary adaptation had occurred. Nonetheless, both are important mechanisms for persistence under climate change. Overall, our study highlights the importance of multi-generational experiments in more accurately determining marine metazoans' responses to changes in p CO 2 , and strengthens the case for exploring their use in conservation, by creating specific p CO 2 tolerant strains of keystone ecosystem species.

  14. Sperm swimming in the polychaete Galeolaria caespitosa shows substantial inter-individual variability in response to future ocean acidification.

    Science.gov (United States)

    Schlegel, Peter; Havenhand, Jon N; Obadia, Nicolas; Williamson, Jane E

    2014-01-15

    The rapidity of ocean acidification intensifies selection pressure for resilient phenotypes, particularly during sensitive early life stages. The scope for selection is greater in species with greater within-species variation in responses to changing environments, thus enhancing the potential for adaptation. We investigated among-male variation in sperm swimming responses (percent motility and swimming speeds) of the serpulid polychaete Galeolaria caespitosa to near- (ΔpH -0.3) and far-future ocean acidification (ΔpH -0.5). Responses of sperm swimming to acidification varied significantly among males and were overall negative. Robust sperm swimming behavior under near-future ocean acidification in some males may ameliorate climate change impacts, if traits associated with robustness are heritable, and thereby enhance the potential for adaptation to far-future conditions. Reduced sperm swimming in the majority of male G. caespitosa may decrease their fertilization success in a high CO2 future ocean. Resultant changes in offspring production could affect recruitment success and population fitness downstream. Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.

  15. Organic nitrogen and caloric content of detritus III. Effect on growth of a deposit-feeding polychaete, Capitella capitata

    Science.gov (United States)

    Tenore, Kenneth R.

    1983-12-01

    Laboratory experiments showed that individual growth rate of the deposit-feeding polychaete, Capitella capitata (type 1) can be predicted by rate of organic nitrogen supply (ration) of detritus to the animals. The rate at which detritus is available to a deposit-feeder, whether by sedimentation to the bottom, or decomposition of otherwise undigestable components via microbial activity, or production rate of microbes themselves, is important and not just the concentrations of limiting substrate of different detritus sources. Even so, the portion of total caloric content of the detritus that can be utilized by a deposit-feeder—approximated by the 'available' caloric content—also contributes to limiting growth. However, available caloric content usually is low when nitrogen content is low, as in the case of vascular plant detritus. Trophic transfer efficiency (net production/food supplied) is a measurement of food chain transfer that is usually calculated in carbon or caloric units. If one is interested in comparing energy or carbon flow in food chains, then use of these parameters is appropriate; if one is interested in comparing the efficiencies of different species, then calculations must be made using nutritional factors limiting growth.

  16. Consequences of a poecilogonous life history for genetic structure in coastal populations of the polychaete Streblospio benedicti.

    Science.gov (United States)

    Zakas, Christina; Wares, John P

    2012-11-01

    In many species, alternative developmental pathways lead to the production of two distinct phenotypes, promoting the evolution of morphological novelty and diversification. Offspring type in marine invertebrates influences transport time by ocean currents, which dictate dispersal potential and gene flow, and thus has sweeping evolutionary effects on the potential for local adaptation and on rates of speciation, extinction and molecular evolution. Here, we use the polychaete Streblospio benedicti to investigate the effects of dimorphic offspring type on gene flow and genetic structure in coastal populations. We use 84 single nucleotide polymorphism (SNP) markers for this species to assay populations on the East and West Coasts of the United States. Using these markers, we found that in their native East Coast distribution, populations of S. benedicti have high-population genetic structure, but this structure is associated primarily with geographic separation rather than developmental differences. Interestingly, very little genetic differentiation is recovered between individuals of different development types when they occur in the same or nearby populations, further supporting that this is a true case of poecilogony. In addition, we were able to demonstrate that the recently introduced (~100 ya) West Coast populations probably originated from a lecithotrophic population near Delaware. © 2012 Blackwell Publishing Ltd.

  17. Effect of mercury on taurine transport by the red blood cells of the marine polychaete, Glycera dibranchiata

    International Nuclear Information System (INIS)

    Chen, C.W.; Preston, R.L.

    1987-01-01

    The objective of this study was to characterize the effects of heavy metal exposure on the transport of the amino acid, 14 C-taurine, by the hemoglobin containing coelomocytes (red blood cells) of the marine polychaete, Glycera dibranchiata. Glycera has been used previously in studies on heavy metal absorption. Glycera red cells (RBCs) were used for this study because they contain a high concentration of taurine (190 mM) which has been implicated as a major osmolyte in cellular volume regulation in marine invertebrates. Taurine also appears to participate in osmoregulation of mammalian heart and brain tissue. The coelomic fluid bathing Glycera RBCs typically contains taurine at considerably lower concentrations (0.2 mM). The standing gradients (intracellular conc./extracellular conc.) for amino acids ranges from 40:1 for lysine to 950:1 for taurine. Preliminary experiments demonstrated that the maintenance of the large standing gradient for taurine was apparently due to the presence of a specific Na and Cl dependent taurine transport system in these cells. The fact that Glycera RBCs actively maintain large taurine gradients suggests that this tissue should be an excellent one to use in analysis of the mechanisms of heavy metal interaction with taurine transport systems

  18. Proceraea exoryxae sp. nov. (Annelida, Syllidae, Autolytinae, the first known polychaete miner tunneling into the tunic of an ascidian

    Directory of Open Access Journals (Sweden)

    Daniel Martin

    2017-06-01

    Full Text Available While studying organisms living in association with the solitary tunicate Phallusia nigra (Ascidiacea, Ascidiidae from a shallow fringing reef at Zeytouna Beach (Egyptian Red Sea, one of the collected ascidians showed peculiar perforations on its tunic. Once dissected, the perforations revealed to be the openings of a network of galleries excavated in the inner tunic (atrium by at least six individuals of a polychaetous annelid. The worms belonged to the Autolytinae (Syllidae, a subfamily that is well known to include specialized predators and/or symbionts, mostly associated with cnidarians. The Red Sea worms are here described as Proceraea exoryxae sp. nov., which are anatomically distinguished by the combination of simple chaetae only in anterior chaetigers, and a unique trepan with 33 teeth in one outer ring where one large tooth alternates with one medium-sized tricuspid tooth, and one inner ring with small teeth located just behind the large teeth. Male and female epitokes were found together with atokous individuals within galleries. Proceraea exoryxae sp. nov. constitutes the first known miner in the Autolytinae and the second species in this taxon known to live symbiotically with ascidians. The implications of finding this specialized parasite are discussed considering that Phallusia nigra has been introduced worldwide, in tropical and sub-tropical ecosystems, where it has the potential of becoming invasive.

  19. Quality assessment of benthic macroinvertebrates under the scope of WFD using BAT, the Benthic Assessment Tool.

    Science.gov (United States)

    Teixeira, Heliana; Magalhães Neto, João; Patrício, Joana; Veríssimo, Helena; Pinto, Rute; Salas, Fuensanta; Marques, João Carlos

    2009-10-01

    Assessing the health of ecosystems has become a focal point among researchers worldwide. Recently, the European Water Framework Directive intensified the development of approaches to assess ecosystems' ecological quality. The Benthic Assessment Tool (BAT) is a multimetric approach to evaluate condition of subtidal soft bottom macroinvertebrates of coastal and transitional waters. The effects of anthropogenic disturbances on benthic macroinvertebrate communities, from 1990 to 2006, allowed testing BAT performance in Mondego estuary (Portugal). The method was able to detect decrease on ecological quality, induced essentially by eutrophication and physical disturbances, and follow communities' subsequent recovery. It evidenced, nevertheless, some limitations associated with the unstable nature of estuaries. The ecological classification of key species in the community and the balance expected between ecological groups of estuarine communities had great influence in the final ecological assessment. Shortcomings of the method were discussed in the light of its suitability for assessing transitional waters' condition.

  20. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitat, Key Benthic Species, and Marine Debris Sightings of the Pacific Remote Island Areas since 2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  1. Benthic percent cover derived from analysis of benthic images collected at coral reef sites in Timor-Leste in 2013 and 2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The benthic cover data described here result from benthic photo-quadrat surveys conducted by the NOAA Coral Reef Ecosystem Program (CREP) in hard bottom shallow...

  2. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitat, Key Benthic Species, and Marine Debris Sightings of American Samoa in 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  3. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitat, Key Benthic Species, and Marine Debris Sightings of the Marianas since 2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  4. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitat, Key Benthic Species, and Marine Debris Sightings of the Hawaiian Archipelago in 2016

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  5. Shallow-Water Benthic Habitats of Southwest Puerto Rico

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  6. Ecology of intertidal benthic algae of Northern Karnataka coast

    Digital Repository Service at National Institute of Oceanography (India)

    Untawale, A.G.; Reddy, C.R.K.; Deshmukhe, G.V.

    The intertidal benthic marine algal flora has been studied for distribution, phenology, biomass and zonation along with the environmental conditions. About 65 species belonging to 42 genera of Chlorophyta, Phaeophyta have been recorded. Rhodophyta...

  7. USVI Land-Based Threat to Benthic Habitats

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set describes the potential threat of sediment delivery and land-based sources of pollution to benthic habitats. This dataset is derived from NOAA's study,...

  8. Shallow-water Benthic Habitats in Jobos Bay

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of Jobos Bay, Puerto Rico were mapped and characterized using visual interpretation...

  9. Coastal Bend Texas Benthic Habitat - Espiritu Santo Bay 2007 Substrate

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing and new digital multi-spectral imagery and create digital benthic...

  10. Coastal Bend Texas Benthic Habitat - Espiritu Santo Bay 2007 Geoform

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing and new digital multi-spectral imagery and create digital benthic...

  11. Coastal Bend Texas Benthic Habitat - Espiritu Santo Bay 2007 Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing and new digital multi-spectral imagery and create digital benthic...

  12. Coastal Bend Texas Benthic Habitat - Espiritu Santo Bay 2007 Biotic

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing and new digital multi-spectral imagery and create digital benthic...

  13. Evidence for complete denitrification in a benthic foraminifer

    DEFF Research Database (Denmark)

    Risgaard-Petersen, Nils; Langezaal, Alexandra; Ingvardsen, Signe

    2006-01-01

    Benthic foraminifera are unicellular eukaryotes found abundantly in many types of marine sediments. Many species survive and possibly reproduce in anoxic habitats1, but sustainable anaerobic metabolism has not been previously described. Here we demonstrate that the foraminifer Globobulimina pseud...

  14. Atlantic Deep-Water Canyons (Benthic Landers) 2013

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Each benthic lander contains a programmable sediment trap which can take 12 monthly samples, plus instruments to record temperature, salinity, dissolved oxygen,...

  15. Reproductive behaviour of benthic foraminifera: A key to palaeoclimate

    Digital Repository Service at National Institute of Oceanography (India)

    Nigam, R.

    Many benthic foraminiferal species exhibit dimorphism associated with reproduction. The two resultant forms are known as microspheric and megalospheric forms. Culture studies, though limited in number, show that ratios of these forms are affected...

  16. WASP7 BENTHIC ALGAE - MODEL THEORY AND USER'S GUIDE

    Science.gov (United States)

    The standard WASP7 eutrophication module includes nitrogen and phosphorus cycling, dissolved oxygen-organic matter interactions, and phytoplankton kinetics. In many shallow streams and rivers, however, the attached algae (benthic algae, or periphyton, attached to submerged substr...

  17. Northeast Puerto Rico and Culebra Island - Benthic Habitat Map 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This benthic habitat map was created from a semi-automated habitat mapping process, using a combination of bathymetry, satellite imagery, aerial imagery and...

  18. NEFSC 2015 Benthic Habitat Survey (HB1507, EK60)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This survey collects benthic samples using acoustics, nets, and grab samplers. The survey monitors and maps the geological, physical, and biological habitats of the...

  19. St. John Benthic Habitat Mapping - Moderate Depth Ground Validation Sites

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitats of the moderate-depth marine environment in and around the Virgin Islands Coral Reef National Monument were mapped using a combination of...

  20. Vieques, Puerto Rico Benthic Habitat Map - Ground Validation Sites

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitat maps of the nearshore marine environment of Vieques, Puerto Rico were created by visual interpretation of remotely sensed imagery. The objective of...

  1. Ecology of benthic production in the coastal zone of Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Harkantra, S.N.; Parulekar, A.H.

    biomass was mainly contributed by the brown mussel Perna indica It is deduced that the benthic standing crop could possibly sustain a high yield of demersal fish catch than what is being exploited at present...

  2. Organic enrichment and benthic fauna–Some ecological consideration.

    Digital Repository Service at National Institute of Oceanography (India)

    Ansari, Z.A.; Ingole, B.S.; Abidi, S.A.H.

    and quantity, could act as a food source or as a stress source for the benthic community. Present study further demonstrated the general trend of modeled hypothesis with some variation in tropical condition....

  3. Puerto Rico Land-Based Threat to Benthic Habitats

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set describes the potential threat of sediment delivery and land-based sources of pollution to benthic habitats. This dataset is derived from NOAA's study,...

  4. Anti-inflammatory activity in selected Antarctic benthic organisms

    OpenAIRE

    Moles, Juan; Torrent, Anna; Alcaraz, M. José; Ruhí, Ramon; Avila, Conxita

    2014-01-01

    Antarctic benthos was prospected in search for anti-inflammatory activity in polar benthic invertebrates, in two different geographical areas: deep-bottoms of the Eastern Weddell Sea and shallow-waters of the South Shetland Islands. A total of 36 benthic algae and invertebrate species were selected to perform solubility tests in order to obtain extracts that were soluble at an innocuous ethanol concentration (0.2%) for cell culture, and further test them for anti-inflammatory activity. From t...

  5. Benthic contributions to Adriatic and Mediterranean biogeochemical cycles

    Science.gov (United States)

    Capet, Arthur; Lazzari, Paolo; Spagnoli, Federico; Bolzon, Giorgio; Solidoro, Cosimo

    2017-04-01

    The 3D biogeochemical BFM-OGSTM implementation currently exploited operationally in the Copernicus Marine Environment Monitoring Services Mediterranean Sea Monitoring and Forecasting Centre (CMEMS-Med-MFC; Lazzari et al., 2010) has been complemented with a benthic component. The approach followed that of (Capet et al 2016) and involved a vertically integrated benthic module accounting for the effect of environmental bottom conditions on diagenetic rates (aerobic mineralization, denitrification, nitrification) through transfer functions as well as the effect of waves and bottom currents on sediment deposition and resuspension. A balanced climatological year is simulated for various values of the resuspension parameters, using specifically calibrated transfer functions for the Adriatic Sea and generic formulations for the rest of the Mediterranean basin. The results serves the mapping of distinct provinces of the Adriatic Sea based on the benthic contributions biogeochemical budgets and the seasonal variability of benthic-pelagic fluxes. The differences with the non-benthic reference simulation are highlighted in details regarding the Adriatic, and more generally for the entire Mediterranean Sea. Lazzari, P., Teruzzi, A., Salon, S., Campagna, S., Calonaci, C., Colella, S., Tonani, M., Crise, A. (2010). Pre-operational short-term forecasts for Mediterranean Sea biogeochemistry. Ocean Science, 6(1), 25-39. Capet, A., Meysman, F. J., Akoumianaki, I., Soetaert, K., & Grégoire, M. (2016). Integrating sediment biogeochemistry into 3D oceanic models: A study of benthic-pelagic coupling in the Black Sea. Ocean Modelling, 101, 83-100.

  6. Modelling benthic biophysical drivers of ecosystem structure and biogeochemical response

    Science.gov (United States)

    Stephens, Nicholas; Bruggeman, Jorn; Lessin, Gennadi; Allen, Icarus

    2016-04-01

    The fate of carbon deposited at the sea floor is ultimately decided by biophysical drivers that control the efficiency of remineralisation and timescale of carbon burial in sediments. Specifically, these drivers include bioturbation through ingestion and movement, burrow-flushing and sediment reworking, which enhance vertical particulate transport and solute diffusion. Unfortunately, these processes are rarely satisfactorily resolved in models. To address this, a benthic model that explicitly describes the vertical position of biology (e.g., habitats) and biogeochemical processes is presented that includes biological functionality and biogeochemical response capturing changes in ecosystem structure, benthic-pelagic fluxes and biodiversity on inter-annual timescales. This is demonstrated by the model's ability to reproduce temporal variability in benthic infauna, vertical pore water nutrients and pelagic-benthic solute fluxes compared to in-situ data. A key advance is the replacement of bulk parameterisation of bioturbation by explicit description of the bio-physical processes responsible. This permits direct comparison with observations and determination of key parameters in experiments. Crucially, the model resolves the two-way interaction between sediment biogeochemistry and ecology, allowing exploration of the benthic response to changing environmental conditions, the importance of infaunal functional traits in shaping benthic ecological structure and the feedback the resulting bio-physical processes exert on pore water nutrient profiles. The model is actively being used to understand shelf sea carbon cycling, the response of the benthos to climatic change, food provision and other societal benefits.

  7. Sensitivity of Coastal Environments and Wildlife to Spilled Oil: Upper Coast of Texas: BENTHIC (Benthic habitat polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains known locations of patchy and continuous seagrass and oyster reef habitat for the Upper Coast of Texas benthic habitat data. This data set...

  8. 2D Gel-Based Multiplexed Proteomic Analysis during Larval Development and Metamorphosis of the Biofouling Polychaete Tubeworm Hydroides elegans

    KAUST Repository

    Zhang, Yu

    2010-09-03

    Larval settlement and metamorphosis of a common biofouling polychaete worm, Hydroides elegans, involve remarkable structural and physiological changes during this pelagic to sessile habitat shift. The endogenous protein molecules and post-translational modifications that drive this larval transition process are not only of interest to ecologists but also to the antifouling paint industry, which aims to control the settlement of this biofouling species on man-made structures (e.g., ship hulls). On the basis of our recent proteomic studies, we hypothesize that rapid larval settlement of H. elegans could be mediated through changes in phosphorylation status of proteins rather than extensive de novo synthesis of proteins. To test this hypothesis, 2D gel-based multiplexed proteomics technology was used to monitor the changes in protein expression and phosphorylation status during larval development and metamorphosis of H. elegans. The protein expression profiles of larvae before and after they reached competency to attach and metamorphose were similar in terms of major proteins, but the percentage of phosphorylated proteins increased from 41% to 49% after competency. Notably, both the protein and phosphoprotein profiles of the metamorphosed individuals (adult) were distinctly different from that of the larvae, with only 40% of the proteins phosphorylated in the adult stage. The intensity ratio of all phosphoprotein spots to all total protein spots was also the highest in the competent larval stage. Overall, our results indicated that the level of protein phosphorylation might play a crucial role in the initiation of larval settlement and metamorphosis. © 2010 American Chemical Society.

  9. The development of the larval nervous system, musculature and ciliary bands of Pomatoceros lamarckii (Annelida: heterochrony in polychaetes

    Directory of Open Access Journals (Sweden)

    Shimeld Sebastian M

    2006-10-01

    Full Text Available Abstract Background To understand the evolution of animals it is essential to have taxon sampling across a representative spread of the animal kingdom. With the recent rearrangement of most of the Bilateria into three major clades (Ecdysozoa, Lophotrochozoa and Deuterostomia it has become clear that the Lophotrochozoa are relatively poorly represented in our knowledge of animal development, compared to the Ecdysozoa and Deuterostomia. We aim to contribute towards redressing this balance with data on the development of the muscular, nervous and ciliary systems of the annelid Pomatoceros lamarckii (Serpulidae. We compare our data with other lophotrochozoans. Results P. lamarckii develops locomotory and feeding structures that enable it to become a swimming, planktotrophic larva within 24 hours. Formation of the trochophore includes development of a prototroch, metatroch and neurotroch, development of apical and posterior nervous elements at similar times, and development of musculature around the ciliary bands and digestive tract prior to development of any body wall muscles. The adult nervous and muscular systems are essentially preformed in the late larva. Interestingly, the muscular systems of the larvae and juvenile worms do not include the circular muscles of the body wall, which are considered to be plesiomorphic for annelids, although the possibility that circular muscles develop after these stages cannot be ruled out at this point. Conclusion A comparison between polychaetes shows variability in the timing (heterochrony of development of body wall muscles and elements of the nervous system. These heterochronies are one route for evolution of different life history strategies, such as adaptations to feeding requirements.

  10. Finding of the same antigens in the polychaete, Pseudopotamilla occelata, as those in the vanadium-rich ascidian, Ascidia sydneiensis samea.

    Science.gov (United States)

    Uyama, T; Nose, Y; Wuchiyama, J; Moriyama, Y; Michibata, H

    1997-02-01

    The polychaete Pseudopotamilla occelata is the first animal revealed to contain high levels of vanadium besides ascidians. The present experiment disclosed that P. occelata has the same antigens with those in the ascidian Ascidia syndneiensis samea, which were recognized by two types of antibodies, a polyclonal antibody against vanadium-associated proteins extracted from blood cells and a monoclonal antibody against vanadocytes in the vanadium-rich ascidian A. sydneiensis samea. There is, therefore, a possibility that similar mechanism works on the accumulation of vanadium between the Polychaeta and the Ascididae.

  11. Modelling habitat range and seasonality of a new, non-indigenous polychaete Laonome sp (Sabellida, Sabellidae) in Parnu Bay, the north-eastern Baltic Sea

    OpenAIRE

    Kotta, Jonne; Kotta, Ilmar; Bick, Andreas; Bastrop, Ralf; Väinölä, Risto

    2015-01-01

    An as-yet-undescribed, non-indigenous polychaete species was found at very high densities in the eastern part of the Baltic Sea in Estonia in 2012. The species belongs to the sabellid genus Laonome Malmgren, 1866, but it could not be assigned to any of the previously described species. To date, the species has established a stable population after surviving a notably cold winter (2012/2013). To study the local distribution and abundance of the species, a spatial grid with some stations repeat...

  12. Benthic algal communities : recovery from experimental acidification

    Energy Technology Data Exchange (ETDEWEB)

    Turner, M.A.; Findlay, D.L.; Kasian, S.E.M. [Fisheries and Oceans Canada, Winnipeg, MB (Canada). Freshwater Inst.; Baulch, H.M. [Fisheries and Oceans Canada, Winnipeg, MB (Canada); Trent Univ., Peterborough, ON (Canada); Armstrong, L.M. [Ducks Unlimited Canada, Stonewall, MB (Canada). Inst. for Wetland and Waterfowl Research; McNicol, D.K. [Canadian Wildlife Service, Ottawa, ON (Canada); Vinebrooke, R.D. [Alberta Univ., Edmonton, AB (Canada). Dept. of Biological Sciences

    2009-11-15

    This study evaluated the hypothesis that chemical recovery promotes the rapid recovery of benthic algal communities in formerly acidified lakes. The study was conducted at an experimental lake in Ontario over a 10 year period of pH recovery that followed a 10 year period of experimental acidification from a pH of 6.7 to 4.5. A reference lake in the region was also studied to account for regional changes during the study period. Changes in the epilithon on rock surfaces included lower cyanobacterial biomass following the acidification as well as increases in diatoms and greens. Acidification-induced increases in respiration prevented epilithic metabolic recovery. Prior declines in photosynthesis were reversed. Blooms of metaphytic filamentous green algae with a higher pH occurred during the recovery period. The recovery of many aggregate functional and taxonomic properties lagged behind reductions in acidity. Incomplete chemical recovery and the absence of functionally important biota were attributed to incomplete algal recovery at the lake. 59 refs., 2 tabs., 8 figs.

  13. Microplastic Effect Thresholds for Freshwater Benthic Macroinvertebrates

    Science.gov (United States)

    2018-01-01

    Now that microplastics have been detected in lakes, rivers, and estuaries all over the globe, evaluating their effects on biota has become an urgent research priority. This is the first study that aims at determining the effect thresholds for a battery of six freshwater benthic macroinvertebrates with different species traits, using a wide range of microplastic concentrations. Standardized 28 days single species bioassays were performed under environmentally relevant exposure conditions using polystyrene microplastics (20–500 μm) mixed with sediment at concentrations ranging from 0 to 40% sediment dry weight (dw). Microplastics caused no effects on the survival of Gammarus pulex, Hyalella azteca, Asellus aquaticus, Sphaerium corneum, and Tubifex spp. and no effects were found on the reproduction of Lumbriculus variegatus. No significant differences in growth were found for H. azteca, A. aquaticus, S. corneum, L. variegatus, and Tubifex spp. However, G. pulex showed a significant reduction in growth (EC10 = 1.07% sediment dw) and microplastic uptake was proportional with microplastic concentrations in sediment. These results indicate that although the risks of environmentally realistic concentrations of microplastics may be low, they still may affect the biodiversity and the functioning of aquatic communities which after all also depend on the sensitive species. PMID:29337537

  14. Composition, abundance and distribution of holoplanktonic polychaetes from the expedition “El Golfo 6311-12” of Scripps Institution of Oceanography

    Directory of Open Access Journals (Sweden)

    María Ana Fernández-Álamo

    2006-12-01

    Full Text Available Holoplanktonic polychaetes from the zooplankton samples taken during El Golfo 63/11-12 Cruise conducted by Scripps Institution of Oceanography, University of California, San Diego, were studied. Eighty-seven samples were reviewed, which were collected over an extensive area including both coasts, western and eastern, of the Baja California peninsula, the continental coast of the Gulf of California, and some localities in the northeastern Pacific. Samples were obtained in the epipelagic region by oblique plankton hauls (using conical nets 5 m in length, 0.5 and 1.0 m in mouth diameter, and 0.50 mm mesh, from 47 localities. Two hundred and twenty-three polychaetes belonging to 17 species of six holoplanktonic families were identified. Ecological characterization of the species showed that Phalacrophorus uniformis, Typhloscolex muelleri, Sagitella kowalewski and Travisiopsis dubia were dominant, Tomopteris nationalis was constantly seen, and the remaining twelve species were rare. The richness and distribution of these holoplanktonic worms were poor compared with other collections obtained by different cruises in the adjacent offshore regions of the survey area. These results are discussed from a biogeographical point of view.

  15. Hidden in the crowd: primordial germ cells and somatic stem cells in the mesodermal posterior growth zone of the polychaete Platynereis dumerillii are two distinct cell populations

    Directory of Open Access Journals (Sweden)

    Rebscher Nicole

    2012-04-01

    Full Text Available Abstract Background In the polychaete Platynereis, the primordial germ cells (PGCs emerge from the vasa, piwi, and PL10 expressing mesodermal posterior growth zone (MPGZ at the end of larval development, suggesting a post-embryonic formation from stem cells. Methods In order to verify this hypothesis, embryos and larvae were pulse labeled with the proliferation marker 5-ethynyl-2'-deoxyuridine (EdU at different stages of development. Subsequently, the PGCs were visualized in 7-day-old young worms using antibodies against the Vasa protein. Results Surprisingly, the primordial germ cells of Platynereis incorporate EdU only shortly before gastrulation (6-8 hours post fertilization (hpf, which coincides with the emergence of four small blastomeres from the mesoblast lineage. We conclude that these so-called 'secondary mesoblast cells' constitute the definitive PGCs in Platynereis. In contrast, the cells of the MPGZ incorporate EdU only from the pre-trochophore stage onward (14 hpf. Conclusion While PGCs and the cells of the MPGZ in Platynereis are indistinguishable in morphology and both express the germline markers vasa, nanos, and piwi, a distinct cluster of PGCs is detectable anterior of the MPGZ following EdU pulse-labeling. Indeed the PGCs form independently from the stem cells of the MPGZ prior to gastrulation. Our data suggest an early PGC formation in the polychaete by preformation rather than by epigenesis.

  16. Developmental stages of fish blood flukes, Cardicola forsteri and Cardicola opisthorchis (Trematoda: Aporocotylidae), in their polychaete intermediate hosts collected at Pacific bluefin tuna culture sites in Japan.

    Science.gov (United States)

    Ogawa, Kazuo; Shirakashi, Sho; Tani, Kazuki; Shin, Sang Phil; Ishimaru, Katsuya; Honryo, Tomoki; Sugihara, Yukitaka; Uchida, Hiro'omi

    2017-02-01

    Farming of Pacific bluefin tuna (PBT), Thunnus orientalis, is a rapidly growing industry in Japan. Aporocotylid blood flukes of the genus Cardicola comprising C. orientalis, C. opisthorchis and C. forsteri are parasites of economic importance for PBT farming. Recently, terebellid polychaetes have been identified as the intermediate hosts for all these parasites. We collected infected polychaetes, Terebella sp., the intermediate host of C. opisthorchis, from ropes and floats attached to tuna cages in Tsushima, Nagasaki Prefecture, Japan. Also, Neoamphitrite vigintipes (formerly as Amphitrite sp. sensu Shirakashi et al., 2016), the intermediate host of C. forsteri, were collected from culture cages in Kushimoto, Wakayama Prefecture, Japan. The terebellid intermediate hosts harbored the sporocysts and cercariae in their body cavity. Developmental stages of these blood flukes were molecularly identified using species specific PCR primers. In this paper, we describe the cercaria and sporocyst stages of C. opisthorchis and C. forsteri and compare their morphological characteristics among three Cardicola blood flukes infecting PBT. We also discuss phylogenetic relations of the six genera of the terebellid intermediate hosts (Artacama, Lanassa, Longicarpus, Terebella, Nicolea and Neoamphitrite) of blood flukes infecting marine fishes, based on their morphological characters. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  17. Marine benthic faunal successional stages and related sedimentary activity

    Directory of Open Access Journals (Sweden)

    Rutger Rosenberg

    2001-12-01

    Full Text Available This paper is a brief review of successional stages and activity of benthic soft-bottom communities. Benthic communities was first described by Petersen in the 1910s and further developed by Molander, Thorson and Margalef. Successional stages of benthic communities chance in a predictable way in relation to environmental disturbance and food availability. Food supply to the bottom can occur as a vertical flux, but transport through lateral advection is more important in some areas. While at the bottom, the infauna processes the food in many different ways, and the feeding modes can be categorised into more than 20 functional groups, but fewer are present in brackish water. This categorisation is based on animal mobility and where and how they ingest the food. Animal activity in the sediment, bioturbation, has a significant effect on redox conditions and diagenetic processes. Structures in the sediment due to infaunal presence and activity can be observed in situ by sediment profile imaging, and the biogenic structures and redox conditions can be parameterised and have been shown to correlate to benthic community successional stages. The largest threat to benthic faunal biodiversity is the spread of near-bottom oxygen deficiency in many enclosed are stratified coastal areas.

  18. Benthic Habitat Maps for Rose Atoll Marine National Monument in American Samoa from 2004 to 2010

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitat maps for Rose Atoll, American Samoa were derived from high resolution, multispectral satellite imagery for 2004, 2006, and 2010. The benthic habitat...

  19. Benthic ecological mapping of the Ayeyarwady delta shelf off Myanmar, using foraminiferal assemblages

    Digital Repository Service at National Institute of Oceanography (India)

    Panchang, R.; Nigam, R.

    Information on benthic ecologies is a prerequisite to evaluate marine resources, their management and monitoring the impact arising from their exploitation. In the present study, benthic foraminiferal distributions from 124 surface sediment samples...

  20. Quo vadis NW Black Sea benthic ecosystems?

    Science.gov (United States)

    Traian Gomoiu, Marian

    2016-04-01

    The author briefly presents a general review on the evolution trends of benthic ecosystems at the Romanian Black Sea coast, referring to some recent data from the literature. The Black Sea represents a "unicum hydrobiologicum" by some of its basic characteristics, such as: 1. a large semi-enclosed basin with an intense exchange of waters; 2. a sea receiving a large amount of fresh water, especially in its northwestern sector, brought by the Danube, Dnieper and Dniester Rivers; 3. a large meromictic sea - euxinic-azoic below depths of 150 - 200 m; 4. around the sea there is a large filter-holding belt consisting of bivalves (Mytilus galloprovincialis and Modiolula phaseolina); 5. a sea having in its northwestern sector a large area covered by red algae of the genus Phyllophora; 6. a sea undergoing, in the last 50 years, intense environmental pressures (pollution by large rivers and direct discharges of wastewater from urban areas, the development of maritime traffic, overfishing by bottom trawling, coastal facilities and especially by many defense works of the new port); 7. a sea registering in the last decades of the past century many events of eutrophication; 8. a sea enriching its biodiversity by alien species. After the political and socio-economic changes triggered by the events of 1989 and especially after Romania's accession to EU, the state of the northwestern Black Sea coastal ecosystems, has recorded positive changes: • Decrease in environmental pressures; • Decreasing pollutant / fertilizing discharges into the Danube; • Reduction of domestic sewage quantities from coastal settlements; • Improvement in the quality of the wastewater discharged into the sea; • Reduction of active fishing by bottom trawling; • Adopting and implementing a national / international set of guidelines concerning marine environment; • Adopting regulations on the protection of the marine environment against pollution in marine economy: transport / shipping, tourism

  1. Benthic plastic debris in marine and fresh water environments.

    Science.gov (United States)

    Corcoran, Patricia L

    2015-08-01

    This review provides a discussion of the published literature concerning benthic plastic debris in ocean, sea, lake, estuary and river bottoms throughout the world. Although numerous investigations of shoreline, surface and near-surface plastic debris provide important information on plastic types, distribution, accumulation, and degradation, studies of submerged plastic debris have been sporadic in the past and have become more prominent only recently. The distribution of benthic debris is controlled mainly by combinations of urban proximity and its association with fishing-related activities, geomorphology, hydrological conditions, and river input. High density plastics, biofouled products, polymers with mineral fillers or adsorbed minerals, and plastic-metal composites all have the potential to sink. Once deposited on the bottoms of water basins and channels, plastics are shielded from UV light, thus slowing the degradation process significantly. Investigations of the interactions between benthic plastic debris and bottom-dwelling organisms will help shed light on the potential dangers of submerged plastic litter.

  2. Clinch River remedial investigation task 9 -- benthic macroinvertebrates

    Energy Technology Data Exchange (ETDEWEB)

    Scott, E.M. Jr.

    1994-08-01

    This report summarizes the results of Task 9 of the TVA/Department of Energy (DOE) Interagency Agreement supporting DOE`s Clinch River Remedial Investigation. Species lists and densities (numbers/m{sup 2}) of benthic macroinvertebrates sampled at 16 sites in the Clinch River and Poplar Creek embayments of upper Watts Bar Reservoir near Oak Ridge, Tennessee, in March, 1994, are presented and briefly discussed. Data are also analyzed to assess and compare quality of benthic communities at each site, according to methods developed for TVA`s Reservoir Vital Signs Monitoring Program. Results of this study will be incorporated with other program tasks in a comprehensive report prepared by Oak Ridge National Laboratory in 1995, which will, in part, assess the effect of sediment contaminants on benthic macroinvertebrate communities in Watts Bar Reservoir.

  3. Effect of settled diatom-aggregates on benthic nitrogen cycling.

    Science.gov (United States)

    Marzocchi, Ugo; Thamdrup, Bo; Stief, Peter; Glud, Ronnie N

    2018-01-01

    The marine sediment hosts a mosaic of microhabitats. Recently it has been demonstrated that the settlement of phycodetrital aggregates can induce local changes in the benthic O 2 distribution due to confined enrichment of organic material and alteration of the diffusional transport. Here, we show how this microscale O 2 shift substantially affects benthic nitrogen cycling. In sediment incubations, the settlement of diatom-aggregates markedly enhanced benthic O 2 and NO3- consumption and stimulated NO2- and NH4+ production. Oxygen microprofiles revealed the rapid development of anoxic niches within and underneath the aggregates. During 120 h following the settling of the aggregates, denitrification of NO3- from the overlying water increased from 13.5 μmol m -2 h -1 to 24.3 μmol m -2 h -1 , as quantified by 15 N enrichment experiment. Simultaneously, N 2 production from coupled nitrification-denitrification decreased from 33.4 μmol m -2 h -1 to 25.9 μmol m -2 h -1 , probably due to temporary inhibition of the benthic nitrifying community. The two effects were of similar magnitude and left the total N 2 production almost unaltered. At the aggregate surface, nitrification was, conversely, very efficient in oxidizing NH4+ liberated by mineralization of the aggregates. The produced NO3- was preferentially released into the overlying water and only a minor fraction contributed to denitrification activity. Overall, our data indicate that the abrupt change in O 2 microdistribution caused by aggregates stimulates denitrification of NO3- from the overlying water, and loosens the coupling between benthic nitrification and denitrification both in time and space. The study contributes to expanding the conceptual and quantitative understanding of how nitrogen cycling is regulated in dynamic benthic environments.

  4. Effect of settled diatom‐aggregates on benthic nitrogen cycling

    Science.gov (United States)

    Thamdrup, Bo; Stief, Peter; Glud, Ronnie N.

    2017-01-01

    Abstract The marine sediment hosts a mosaic of microhabitats. Recently it has been demonstrated that the settlement of phycodetrital aggregates can induce local changes in the benthic O2 distribution due to confined enrichment of organic material and alteration of the diffusional transport. Here, we show how this microscale O2 shift substantially affects benthic nitrogen cycling. In sediment incubations, the settlement of diatom‐aggregates markedly enhanced benthic O2 and NO3− consumption and stimulated NO2− and NH4+ production. Oxygen microprofiles revealed the rapid development of anoxic niches within and underneath the aggregates. During 120 h following the settling of the aggregates, denitrification of NO3− from the overlying water increased from 13.5 μmol m−2 h−1 to 24.3 μmol m−2 h−1, as quantified by 15N enrichment experiment. Simultaneously, N2 production from coupled nitrification‐denitrification decreased from 33.4 μmol m−2 h−1 to 25.9 μmol m−2 h−1, probably due to temporary inhibition of the benthic nitrifying community. The two effects were of similar magnitude and left the total N2 production almost unaltered. At the aggregate surface, nitrification was, conversely, very efficient in oxidizing NH4+ liberated by mineralization of the aggregates. The produced NO3− was preferentially released into the overlying water and only a minor fraction contributed to denitrification activity. Overall, our data indicate that the abrupt change in O2 microdistribution caused by aggregates stimulates denitrification of NO3− from the overlying water, and loosens the coupling between benthic nitrification and denitrification both in time and space. The study contributes to expanding the conceptual and quantitative understanding of how nitrogen cycling is regulated in dynamic benthic environments. PMID:29456269

  5. Benthic Light Availability Improves Predictions of Riverine Primary Production

    Science.gov (United States)

    Kirk, L.; Cohen, M. J.

    2017-12-01

    Light is a fundamental control on photosynthesis, and often the only control strongly correlated with gross primary production (GPP) in streams and rivers; yet it has received far less attention than nutrients. Because benthic light is difficult to measure in situ, surrogates such as open sky irradiance are often used. Several studies have now refined methods to quantify canopy and water column attenuation of open sky light in order to estimate the amount of light that actually reaches the benthos. Given the additional effort that measuring benthic light requires, we should ask if benthic light always improves our predictions of GPP compared to just open sky irradiance. We use long-term, high-resolution dissolved oxygen, turbidity, dissolved organic matter (fDOM), and irradiance data from streams and rivers in north-central Florida, US across gradients of size and color to build statistical models of benthic light that predict GPP. Preliminary results on a large, clear river show only modest model improvements over open sky irradiance, even in heavily canopied reaches with pulses of tannic water. However, in another spring-fed river with greater connectivity to adjacent wetlands - and hence larger, more frequent pulses of tannic water - the model improved dramatically with the inclusion of fDOM (model R2 improved from 0.28 to 0.68). River shade modeling efforts also suggest that knowing benthic light will greatly enhance our ability to predict GPP in narrower, forested streams flowing in particular directions. Our objective is to outline conditions where an assessment of benthic light conditions would be necessary for riverine metabolism studies or management strategies.

  6. Louisiana waterthrush and benthic macroinvertebrate response to shale gas development

    Science.gov (United States)

    Wood, Petra; Frantz, Mack W.; Becker, Douglas A.

    2016-01-01

    Because shale gas development is occurring over large landscapes and consequently is affecting many headwater streams, an understanding of its effects on headwater-stream faunal communities is needed. We examined effects of shale gas development (well pads and associated infrastructure) on Louisiana waterthrush Parkesia motacilla and benthic macroinvertebrate communities in 12 West Virginia headwater streams in 2011. Streams were classed as impacted (n = 6) or unimpacted (n = 6) by shale gas development. We quantified waterthrush demography (nest success, clutch size, number of fledglings, territory density), a waterthrush Habitat Suitability Index, a Rapid Bioassessment Protocol habitat index, and benthic macroinvertebrate metrics including a genus-level stream-quality index for each stream. We compared each benthic metric between impacted and unimpacted streams with a Student's t-test that incorporated adjustments for normalizing data. Impacted streams had lower genus-level stream-quality index scores; lower overall and Ephemeroptera, Plecoptera, and Trichoptera richness; fewer intolerant taxa, more tolerant taxa, and greater density of 0–3-mm individuals (P ≤ 0.10). We then used Pearson correlation to relate waterthrush metrics to benthic metrics across the 12 streams. Territory density (no. of territories/km of stream) was greater on streams with higher genus-level stream-quality index scores; greater density of all taxa and Ephemeroptera, Plecoptera, and Trichoptera taxa; and greater biomass. Clutch size was greater on streams with higher genus-level stream-quality index scores. Nest survival analyses (n = 43 nests) completed with Program MARK suggested minimal influence of benthic metrics compared with nest stage and Habitat Suitability Index score. Although our study spanned only one season, our results suggest that shale gas development affected waterthrush and benthic communities in the headwater streams we studied. Thus, these ecological effects of

  7. DNA extraction from benthic Cyanobacteria: comparative assessment and optimization.

    Science.gov (United States)

    Gaget, V; Keulen, A; Lau, M; Monis, P; Brookes, J D

    2017-01-01

    Benthic Cyanobacteria produce toxic and odorous compounds similar to their planktonic counterparts, challenging the quality of drinking water supplies. The biofilm that benthic algae and other micro-organisms produce is a complex and protective matrix. Monitoring to determine the abundance and identification of Cyanobacteria, therefore, relies on molecular techniques, with the choice of DNA isolation technique critical. This study investigated which DNA extraction method is optimal for DNA recovery in order to guarantee the best DNA yield for PCR-based analysis of benthic Cyanobacteria. The conventional phenol-chloroform extraction method was compared with five commercial kits, with the addition of chemical and physical cell-lysis steps also trialled. The efficacy of the various methods was evaluated by measuring the quantity and quality of DNA by UV spectrophotometry and by quantitative PCR (qPCR) using Cyanobacteria-specific primers. The yield and quality of DNA retrieved with the commercial kits was significantly higher than that of DNA obtained with the phenol-chloroform protocol. Kits including a physical cell-lysis step, such as the MO BIO Power Soil and Biofilm kits, were the most efficient for DNA isolation from benthic Cyanobacteria. These commercial kits allow greater recovery and the elimination of dangerous chemicals for DNA extraction, making them the method of choice for the isolation of DNA from benthic mats. They also facilitate the extraction of DNA from benthic Cyanobacteria, which can help to improve the characterization of Cyanobacteria in environmental studies using qPCRs or population composition analysis using next-generation sequencing. © 2016 The Society for Applied Microbiology.

  8. Fish stomach contents in benthic macroinvertebrate assemblage assessments

    Directory of Open Access Journals (Sweden)

    TH. Tupinambás

    Full Text Available The choice of sampling gears to assess benthic macroinvertebrate communities depends on environmental characteristics, study objectives, and cost effectiveness. Because of the high foraging capacity and diverse habitats and behaviors of benthophagous fishes, their stomach contents may offer a useful sampling tool in studies of benthic macroinvertebrates, especially in large, deep, fast rivers that are difficult to sample with traditional sediment sampling gear. Our objective was to compare the benthic macroinvertebrate communities sampled from sediments with those sampled from fish stomachs. We collected benthic macroinvertebrates and fish from three different habitat types (backwater, beach, riffle in the wet season, drying season, and dry season along a single reach of the Grande River (Paraná River Basin, southeast Brazil. We sampled sediments through use of a Petersen dredge (total of 216 grabs and used gill nets to sample fish (total of 36 samples. We analyzed the stomach contents of three commonly occurring benthophagous fish species (Eigenmannia virescens, Iheringichthys labrosus, Leporinus amblyrhynchus. Chironomids dominated in both sampling methods. Macroinvertebrate taxonomic composition and abundances from fish stomachs differed from those from sediment samples, but less so from riffles than from backwater and beach habitats. Macroinvertebrate taxa from E. virescens stomachs were more strongly correlated with sediment samples from all three habitats than were those from the other two species. The species accumulation curves and higher mean dispersion values, compared with with sediment samples suggest that E. virescens is more efficient than sediment samples and the other fish studied at collecting benthic taxa. We conclude that by analyzing the stomach contents of benthophagous fishes it is possible to assess important characteristics of benthic communities (dispersion, taxonomic composition and diversity. This is especially true

  9. Benthic foraminifera as proxy for oxygen-depleted conditions off the central west coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Nigam, R.; Mazumder, A.; Henriques, P.J.; Saraswat, R.

    collected from a water depth of 15 m to 3300 m were studied for the benthic foraminiferal content. A total of 383 recent benthic foraminiferal species were identified. Out of the total 383 benthic foraminiferal species identified in the study area, 65...

  10. Benthic primary production and mineralization in a High Arctic fjord

    DEFF Research Database (Denmark)

    Attard, Karl; Hancke, Kasper; Sejr, Mikael K.

    2016-01-01

    Coastal and shelf systems likely exert major influence on Arctic Ocean functioning, yet key ecosystem processes remain poorly quantified. We employed the aquatic eddy covariance (AEC) oxygen (O2) flux method to estimate benthic primary production and mineralization in a High Arctic Greenland fjord...... light data, we estimate an annual Arctic Ocean benthic GPP of 11.5 × 107 t C yr−1. On average, this value represents 26% of the Arctic Ocean annual net phytoplankton production estimates. This scarcely considered component is thus potentially important for contemporary and future Arctic ecosystem...

  11. Preliminary results from a shallow water benthic grazing study

    Science.gov (United States)

    Jones, N.L.; Monismith, Stephen G.; Thompson, Janet K.

    2005-01-01

    The nutrient-rich, shallow waters of San Francisco Bay support high rates of primary production, limited not by nutrients but by light availability and benthic grazing (Alpine and others 1992; Cloern 1982). Phytoplankton blooms are an important food source for upper trophic levels. Consequently animal populations, such as fish, may suffer under conditions of high benthic bivalve grazing. It has been hypothesized that several species of fish are suffering as a result of severe decreases in available phytoplankton since the introduction of Potamocorbula amurensis into San Francisco Bay (Feyrer 2003).

  12. Geophysical Conceptual Model for Benthic Flux and Submarine Groundwater Discharge

    Science.gov (United States)

    King, J. N.

    2010-12-01

    Numerous investigators characterize benthic flux and submarine groundwater discharge (SGD) using a geochemical conceptual model that relies on the estimation of tracer fluxes into and out of a control volume. (Benthic flux is the rate of flow across the bed of any water body, per unit area of bed. Benthic flux is a vector that includes both discharge and recharge components. SGD is a benthic water discharge flux to a marine water body.) For the geochemical approach, benthic discharge flux or SGD is estimated by summing the flux of tracer into or out of the control volume---a water body or portion of a water body---and deducing that tracer deficiency within the control volume must be explained by SGD. Typically, estimated or measured fluxes include advection and mixing in surface-water, diffusion, evasion across the air-water interface, production, and decay. The geochemical model, however, does not account for fluxes that do not transport tracer. For example, investigators found equivalent (the upper 30 cm of sediment in the Indian River Lagoon, Florida, in June and July 2003. At this location, a surface-gravity wave with a five-centimeter amplitude and one-second period in 0.5 m of water forced a 12-cm-per-day SGD. The radon tracer technique may not characterize SGD forced by the one-second wave due to the time scale of the wave, the absence of a radon activity gradient between bed medium and surface water, and the the wave affects the flow field within the porous medium. A new geophysical conceptual model for benthic flux is proposed. The model parses benthic flux into components driven by individual forcing mechanisms. The model recognizes that benthic flux components may interact in a constructive or destructive manner, such that benthic flux generated by multiple forcing mechanisms at the same location may not be equivalent to the linear sum of benthic flux generated by single forcing mechanisms. Restated: the whole may be different than the sum of the parts

  13. Decadal changes in carbon fluxes at the East Siberian continental margin: interactions of ice cover, ocean productivity, particle sedimentation and benthic life

    Science.gov (United States)

    Boetius, A.; Bienhold, C.; Felden, J.; Fernandez Mendez, M.; Gusky, M.; Rossel, P. E.; Vedenin, A.; Wenzhoefer, F.

    2015-12-01

    The observed and predicted Climate-Carbon-Cryosphere interactions in the Arctic Ocean are likely to alter productivity and carbon fluxes of the Siberian continental margin and adjacent basins. Here, we compare field observations and samples obtained in the nineties, and recently in 2012 during the sea ice minimum, to assess decadal changes in the productivity, export and recycling of organic matter at the outer East Siberian margin. In the 90s, the Laptev Sea margin was still largely ice-covered throughout the year, and the samples and measurements obtained represent an ecological baseline against which current and future ecosystem shifts can be assessed. The POLARSTERN expedition IceArc (ARK-XXVII/3) returned in September 2012 to resample the same transects between 60 and 3400 m water depth as well as stations in the adjacent deep basins. Our results suggest that environmental changes in the past two decades, foremost sea ice thinning and retreat, have led to a substantial increase in phytodetritus sedimentation to the seafloor, especially at the lower margin and adjacent basins. This is reflected in increased benthic microbial activities, leading to higher carbon remineralization rates, especially deeper than 3000 m. Besides a relative increase in typical particle degrading bacterial types in surface sediments, bacterial community composition showed little variation between the two years, suggesting that local microbial communities can cope with changing food input. First assessments of faunal abundances suggest an increase in polychaetes,holothurians and bivalves at depth, which fits the prediction of higher productivity and particle deposition rates upon sea ice retreat. The presentation also discusses the controversial issue whether there is evidence for an Arctic-wide increase in carbon flux, or whether we are looking at a spatial shift of the productive marginal ice zone as the main factor to enhance carbon flux to the deep Siberian margin.

  14. Benthic processes affecting contaminant transport in Upper Klamath Lake, Oregon

    Science.gov (United States)

    Kuwabara, James S.; Topping, Brent R.; Carter, James L.; Carlson, Rick A; Parchaso, Francis; Fend, Steven V.; Stauffer-Olsen, Natalie; Manning, Andrew J.; Land, Jennie M.

    2016-09-30

    Executive SummaryMultiple sampling trips during calendar years 2013 through 2015 were coordinated to provide measurements of interdependent benthic processes that potentially affect contaminant transport in Upper Klamath Lake (UKL), Oregon. The measurements were motivated by recognition that such internal processes (for example, solute benthic flux, bioturbation and solute efflux by benthic invertebrates, and physical groundwater-surface water interactions) were not integrated into existing management models for UKL. Up until 2013, all of the benthic-flux studies generally had been limited spatially to a number of sites in the northern part of UKL and limited temporally to 2–3 samplings per year. All of the benthic invertebrate studies also had been limited to the northern part of the lake; however, intensive temporal (weekly) studies had previously been completed independent of benthic-flux studies. Therefore, knowledge of both the spatial and temporal variability in benthic flux and benthic invertebrate distributions for the entire lake was lacking. To address these limitations, we completed a lakewide spatial study during 2013 and a coordinated temporal study with weekly sampling of benthic flux and benthic invertebrates during 2014. Field design of the spatially focused study in 2013 involved 21 sites sampled three times as the summer cyanobacterial bloom developed (that is, May 23, June 13, and July 3, 2013). Results of the 27-week, temporally focused study of one site in 2014 were summarized and partitioned into three periods (referred to herein as pre-bloom, bloom and post-bloom periods), each period involving 9 weeks of profiler deployments, water column and benthic sampling. Partitioning of the pre-bloom, bloom, and post-bloom periods were based on water-column chlorophyll concentrations and involved the following date intervals, respectively: April 15 through June 10, June 17 through August 13, and August 20 through October 16, 2014. To examine

  15. Although the benthic macrofauna of sandy environ- ments around ...

    African Journals Online (AJOL)

    spamer

    Although the benthic macrofauna of sandy environ- ments around tidal inlets has been extensively studied around the world, e.g. sandbars (Holland and Dean. 1977), estuarine sandflats (Reise 1985, Dittmann 1995), bays (Jones 1997) and harbours (Parker 1975, Prid- more et al. 1990), there is a paucity of data that ...

  16. Temporal variability of benthic macrofauna on Cassino beach, southernmost Brazil

    Directory of Open Access Journals (Sweden)

    Luciano P. das Neves

    2008-03-01

    Full Text Available The temporal variability of benthic macrofauna on Cassino beach, southernmost Brazil, was studied for a period of one year (June 2004 to May 2005 based on monthly sampling. Three sites were selected distant 50m from each other. At each site, 3 transects were established, 2m equidistant from one another. Each transect extended from the base of the primary dunes to the inner surf zone at approximately 1m in depth, with 7 or 8 sampling levels. Within transects, the distance between the levels was 20m until the upper swash zone, from which distance was 10m until the 1-meter isobath. The temporal variation in the abundance of benthic macrofauna observed in the present study can be attributed to (1 the positive effects of the recruitment peaks and migration of particular species to the swash zone and (2 negative effects of the migration of some species to deeper waters, as well (3 as mortality through natural causes (stranding and action of predators and (4 human causes (harvesting and vehicle transit. We attribute the expressive abundance increase of benthic macrofauna to recruitment. The stranding, that is, the trapping of the organisms on the upper parts of the beach, is likely the main cause of abrupt drops in benthic macrofauna abundance.

  17. Benthic foraminifera from the Adriatic Sea : principles of phenotypic variation

    NARCIS (Netherlands)

    Jorissen, F.J.

    1988-01-01

    The distribution and morphology of the benthic foraminifera in the Adriatic Sea appear to be strongly dependent on two primary controlling environmental parameters, oxygen concentration and food availability. These factors are both governed by the runoff from the Po and other Italian rivers, and

  18. Regulation of nitrous oxide emission associated with benthic invertebrates

    DEFF Research Database (Denmark)

    Stief, Peter; Schramm, Andreas

    2010-01-01

    1. A number of freshwater invertebrate species emit N2O, a greenhouse gas that is produced in their gut by denitrifying bacteria (direct N2O emission). Additionally, benthic invertebrate species may contribute to N2O emission from sediments by stimulating denitrification because of their bioirrig...

  19. Stable carbon and oxygen isotope study on benthic foraminifera ...

    Indian Academy of Sciences (India)

    The present study is pursued on isotopic values of different pairs of benthic foraminifera from the Krishna–Godavari basin and Peru offshore to understand habitat-wise isotopic variation and ... Department of Applied Geology, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand 826 004, India.

  20. The Macroevolutionary Interplay Between Planktic Larvae and Benthic Predators

    Science.gov (United States)

    Peterson, K. J.

    2004-12-01

    Many marine invertebrates have a complex life cycle whereby the egg, rather than developing directly to the juvenile stage, develops instead into a intermediate larval form which may spend weeks to months feeding in the plankton before it becomes competent to undergo metamorphosis into the benthic juvenile. Because the selective advantages provided to the animal by having a planktotrophic larval stage are largely unknown, the reasons behind their origin and subsequent maintenance over geological time are not well understood. Using both a molecular clock and the fossil record, I show that four primitively non-feeding larval forms evolved sometime between the late Ediacaran and Early Cambrian, and feeding larvae appear to have evolved from non-feeding ancestors sometime between the Late Cambrian and Middle Ordovician in at least five, if not eight, of eight different clades analyzed. Thus, the initial exploitation of the predator-free pelagos by larvae was achieved independently multiple times by the end of the Early Cambrian, most likely driven by benthic predation pressures upon developing eggs and embryos. Then, because the evolution of larval planktotrophy from lecithotrophic ancestors correlates with the dramatic rise in the generic number of benthic suspension feeders in the Early Ordovician, it seems likely that benthic suspension feeding selected for fecundity, and thus indirectly for planktotrophy, in multiple lineages of marine invertebrates by the end of the Middle Ordovician.

  1. Stable carbon and oxygen isotope study on benthic foraminifera ...

    Indian Academy of Sciences (India)

    Ajoy K Bhaumik

    2017-07-24

    Jul 24, 2017 ... Stable isotopes of benthic foraminifera have widely been applied in micropalaeontological research to understand vital effects in foraminifera. Isotopic fractionations are mainly controlled by ontogeny, bottom/pore water chemistry, habitat preference, kinetic effect and respiration. Discontinuous abundance.

  2. Benthic fauna around Mauritius island, southwest Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Ingole, B.S.; Ansari, Z.A.; Parulekar, A.H.

    Distribution of benthic fauna in the Exclusive Economic Zone of Mauritius was studied during September-October 1987. Mean faunal density (macro+meio) and dry weight biomass was 10848 no.m/2 and 228.8 mg.m/2, respectively. The macrofauna was dominat...

  3. Assessing the suitability of benthic foraminiferal morpho-groups to ...

    Indian Academy of Sciences (India)

    hypersaline deeper waters with low dissolved oxygen, indicating a low energy environment. The agglu- tinated foraminifera, Asterorotalids and Nonions dominate shallow water, low salinity regions, whereas the calcareous benthic foraminiferal abundance increases away from the riverine influx regions. Food availability, as ...

  4. Benthic Species Richness of U.S. Pacific Estuaries

    Science.gov (United States)

    Understanding the spatial distribution of biodiversity is of paramount importance due to the potential consequences of its loss on human welfare. We demonstrate that biodiversity of soft-bottomed estuarine benthic organisms can be predicted with relatively high accuracy at multi...

  5. Assessing the suitability of benthic foraminiferal morpho-groups to ...

    Indian Academy of Sciences (India)

    Foodavailability, as estimated from organic carbon abundance in sediments, has comparatively less influenceon faunal distribution in the northwestern Bay of Bengal, as compared to dissolved oxygen, temperatureand salinity. We conclude that the factors associated with freshwater influx affect the distributionof benthic ...

  6. Controlling benthic release of phosphorus in different Baltic Sea scales

    DEFF Research Database (Denmark)

    Pitkänen, Heikki; Bendtsen, Jørgen; Hansen, Jørgen L. S.

    The general aim of the PROPPEN project was to study whether it is possible to counteract near-bottom anoxia and excess benthic nutrient release ("internal loading") in the Baltic Sea by artificial oxygenation in cost-efficient and socio-economically beneficial ways. Two pilot sites were selected ...

  7. Studies on the benthic fauna of Cochin backwater

    Digital Repository Service at National Institute of Oceanography (India)

    Desai, B.N.; Kutty, M.K.

    Studies on the macrofauna from the five selected stations spread over a distance of about 25 km in the Cochin backwaters showed that the benthic biomass was greater in the region which were near the sea The abundance of organisms decreased...

  8. Survival under stress : benthic foraminiferal patterns and Cenozoic biotic crises

    NARCIS (Netherlands)

    Kouwenhoven, T.J.

    2000-01-01

    A principal conclusion of this thesis is, that benthic foraminifera are excellent recorders of paleoenvironments and paleoenvironmental change. Insight in their community structure, and changes in this through time, is still increasing and will add to their usefulness in the reconstruction of past

  9. Survival under stress : benthic foraminiferal patterns and Cenozoic biotic crises

    NARCIS (Netherlands)

    Kouwenhoven, T.J.

    2000-01-01

    A principal conclusion of this thesis is, that benthic foraminifera are excellent recorders of paleoenvironments and paleoenvironmental change. Insight in their community structure, and changes in this through time, is still increasing and will add to their usefulness in the reconstruction of

  10. Benthic foraminiferal Mn / Ca ratios reflect microhabitat preferences

    NARCIS (Netherlands)

    Koho, K.A.; de Nooijer, L.J.; Fontanier, C.; Toyofuku, T.; Oguri, K.; Kitazato, H.; Reichart, G.-J.

    2017-01-01

    The Mn / Ca of calcium carbonate tests of living (rose-Bengal-stained) benthic foraminifera (Elphidium batialis, Uvigerina spp., Bolivina spissa, Nonionellina labradorica and Chilostomellina fimbriata) were determined in relation to pore water manganese (Mn) concentrations for the first time along a

  11. Studies on benthic denitrification in the Chwaka Bay mangrove ...

    African Journals Online (AJOL)

    Spatial variations in denitrification rates were due to variations in concentration levels of organic matter and possibly to disproportionate competition for inorganic nitrogen between denitrifiers and benthic autotrophs among sites. There were no seasonal differences in denitrification rates. Results from the present study ...

  12. Bathymetric preference of four major genera of rectilinear benthic ...

    Indian Academy of Sciences (India)

    Home; Journals; Journal of Earth System Science; Volume 123; Issue 3. Bathymetric preference of four major genera of rectilinear benthic foraminifera within oxygen minimum zone in Arabian Sea off central west coast of India. Abhijit Mazumder Rajiv Nigam. Volume 123 Issue 3 April 2014 pp 633-639 ...

  13. Assessing the suitability of benthic foraminiferal morpho-groups to ...

    Indian Academy of Sciences (India)

    salinity, suggesting a preference for high energy environment, whereas AABF dominate relatively cold, hypersaline deeper waters with low dissolved oxygen, indicating a low energy environment. The agglu- tinated foraminifera ...... 1998 Living (Rose Bengal stained) benthic foraminifera from the Pakistan continental margin ...

  14. On the coupling of benthic and pelagic biogeochemical models

    NARCIS (Netherlands)

    Soetaert, K.E.R.; Middelburg, J.J.; Herman, P.M.J.; Buis, K.

    2000-01-01

    Mutual interaction of water column and sediment processes is either neglected or only crudely approximated in many biogeochemical models. We have reviewed the approaches to couple benthic and pelagic biogeochemical models. It is concluded that they can be classified into a hierarchical set

  15. Benthic macroinvertebrate community of a fourth order stream in ...

    African Journals Online (AJOL)

    cinthia

    Full Length Research Paper. Benthic macroinvertebrate community of a fourth order stream in Kashmir Himalaya, India. Shazia Habib1* and A.R. Yousuf2. 1Department of Environmental Science, University of Kashmir, Srinagar, India. 2National Green Tribunal, Government of India, India. Received 31 December, 2013; ...

  16. Holocene record of benthic foraminiferal morphogroups from the ...

    Indian Academy of Sciences (India)

    35

    changes at millennial scale are noticed during certain intervals corresponding to northern. 18. Hemispheric climatic events (Fig. 2). The buliminids account for an average of 28 % of the benthic. 19 population in the examined core. The percentage abundance of this group varies between its. 20 minimum 5 % and maximum ...

  17. Response of benthic invertebrate communities to a land use ...

    African Journals Online (AJOL)

    Tropical land use farming (e.g., tea, maize, cabbage) have significant impacts on the benthic invertebrate assemblages of highland streams in Nigeria. However, not all crop and plantation streams had highly impacted communities because some have wider riparian buffer zones. This study further highlight the importance of ...

  18. Growth form defines physiological photoprotective capacity in intertidal benthic diatoms.

    Science.gov (United States)

    Barnett, Alexandre; Méléder, Vona; Blommaert, Lander; Lepetit, Bernard; Gaudin, Pierre; Vyverman, Wim; Sabbe, Koen; Dupuy, Christine; Lavaud, Johann

    2015-01-01

    In intertidal marine sediments, characterized by rapidly fluctuating and often extreme light conditions, primary production is frequently dominated by diatoms. We performed a comparative analysis of photophysiological traits in 15 marine benthic diatom species belonging to the four major morphological growth forms (epipelon (EPL), motile epipsammon (EPM-M) and non-motile epipsammon (EPM-NM) and tychoplankton (TYCHO)) found in these sediments. Our analyses revealed a clear relationship between growth form and photoprotective capacity, and identified fast regulatory physiological photoprotective traits (that is, non-photochemical quenching (NPQ) and the xanthophyll cycle (XC)) as key traits defining the functional light response of these diatoms. EPM-NM and motile EPL showed the highest and lowest NPQ, respectively, with EPM-M showing intermediate values. Like EPL, TYCHO had low NPQ, irrespective of whether they were grown in benthic or planktonic conditions, reflecting an adaptation to a low light environment. Our results thus provide the first experimental evidence for the existence of a trade-off between behavioural (motility) and physiological photoprotective mechanisms (NPQ and the XC) in the four major intertidal benthic diatoms growth forms using unialgal cultures. Remarkably, although motility is restricted to the raphid pennate diatom clade, raphid pennate species, which have adopted a non-motile epipsammic or a tychoplanktonic life style, display the physiological photoprotective response typical of these growth forms. This observation underscores the importance of growth form and not phylogenetic relatedness as the prime determinant shaping the physiological photoprotective capacity of benthic diatoms.

  19. Ecological Assessment of Lake Hora, Ethiopia, Using Benthic and ...

    African Journals Online (AJOL)

    Bheema

    rift-valley lakes, and the Bishoftu crater lakes are in the vicinity of the flourishing city of Debre-. Zeit. Diversion of the inflows ... distribution, composition and abundance of benthic fauna in relation to the type of bottom sediment organic pollution and ... Abebaw Wondie (2007) for a central station. Stations A and B were faced ...

  20. Benthic fauna of Ungwana Bay, Mombassa (Kenya) - A preliminary account

    Digital Repository Service at National Institute of Oceanography (India)

    Ingole, B.S.

    Studies on the benthic fauna of African waters have largely been limited to that of South Africa coast [3,5;7,9,15,18]. Although, the Mombassa Coast is considered importanat for the exploitation of fishery resources. Very little is known about its...

  1. Effects of abattoir wastes on benthic macroinvertebrates of the ...

    African Journals Online (AJOL)

    Values of microbial analysis ranged from 1600 to 2400 MPN/100ml for total coliform count while faecial coliform count ranged from 4 to 2400MPN/100ml. The results indicated that abattoir wastes have adverse effect on the benthic macroinvertebrates. This observation showed that with a continuous discharge of waste into ...

  2. Late Glacial–Holocene record of benthic foraminiferal ...

    Indian Academy of Sciences (India)

    K Verma

    2018-03-06

    Mar 6, 2018 ... influence of oxygen-rich Antarctic Intermediate Water (AAIW). Keywords. Paleontology; benthic foraminifera; oxygen minimum zone; Arabian Sea. 1. Introduction. Seasonally reversing monsoon winds produce seasonal and spatial patterns in the Arabian Sea surface circulation, hydrography and biological.

  3. Production of freshwater benthic macroinvertebrates from pig dung ...

    African Journals Online (AJOL)

    Each bucket was seeded in benthic macroinvertebrates with an initial density of 9 individual/dm3 (D0). The results revealed that the utilization of pig dung improved the water chemical properties in the production medium as well as the macroinvertebrates density (p < 0.05). The optimal production of the latter was obtained ...

  4. Diversity and response of Benthic Macroinvertebrates to Natural and ...

    African Journals Online (AJOL)

    The diversity and response of benthic macroinvertebartes were used in assessing the biological water quality and health status of the stream. Samples were collected from four different stations using the Kick Sampling Technique. All the specimens collected were preserved in 70% alcohol solution and later identified in the ...

  5. The ecological impact of stream regulation using benthic ...

    African Journals Online (AJOL)

    A study of the benthic macroinvertebrates of a fourth order stream in southern Nigeria was carried out to assess the ecological impact of stream regulation. Three stations, 1, 2, and 3 were selected from upstream of the impoundment, the impoundment (reservoir) and it's downstream respectively. Among the physical and ...

  6. Ecology of benthic macroinvertebrates in the depositional biotope of ...

    African Journals Online (AJOL)

    The ecology of benthic macroinvertebrates was studied in the depositional biotope of a river in southern Nigeria in two contrasting tidally influenced fresh and brackish water stations. Forty five taxa in nineteen families representing seven major groups of benthos were recorded. The molluscan families, dominated by ...

  7. Benthic macroinvertebrates as indicators of environmental quality of ...

    African Journals Online (AJOL)

    For a period of 2 years (from July, 1997 to June, 1999), 87 benthic macroinvertebrate taxa, composed of 12,078 individuals were collected from four stations of Bindare stream and one station on River Galma. Samples were collected monthly, using a Van Veen grap. Physicochemical variables were also determined using ...

  8. Benthic monitoring of salmon farms in Norway using foraminiferal metabarcoding

    DEFF Research Database (Denmark)

    Pawlowski, Jan; Esling, Philippe; Lejzerowicz, Franck

    2016-01-01

    The rapid growth of the salmon industry necessitates the development of fast and accurate tools to assess its environmental impact. Macrobenthic monitoring is commonly used to measure the impact of organic enrichment associated with salmon farm activities. However, classical benthic monitoring ca...

  9. Polychaete composition from the abyssal plain adjacent to the Kuril-Kamchatka Trench with the description of a new species of Sphaerephesia (Polychaeta: Sphaerodoridae)

    Science.gov (United States)

    Alalykina, Inna L.

    2015-01-01

    During the KuramBio expedition, the abyssal plain adjacent to the Kuril-Kamchatka Trench was sampled in July-August 2012. More than 5200 individuals of Polychaeta belonging to 38 families, 108 genera and about 144 species were found. Six genera have been reported for the Northwest Pacific for the first time. About 50% of the collected polychaete species are considered as new to science. One of these, Sphaerephesia lesliae sp. n., is described herein. The detailed description of the new species is presented and its differences from similar species are shown. This eighth species of the genus is characterized by the presence of macrotubercles with two paired terminal papillae. The genus Sphaerephesia Fauchald, 1972 is newly recorded in the Northwest Pacific. An updated key to the species of the genus Sphaerephesia is provided.

  10. The relative importance of water and diet for uptake and subcellular distribution of cadmium in the deposit-feeding polychaete, Capitella sp I

    DEFF Research Database (Denmark)

    Selck, Henriette; Forbes, Valery E.

    2004-01-01

    The impact of dietary and water exposure on the accumulation and distribution of cadmium (Cd) in subcellular components of the polychaete Capitella sp. I was investigated. Worms were exposed to either dissolved Cd alone ('Water-Only' treatments; WO) or diet-bound Cd alone ('Algae-bound Only......, starvation likewise influenced the distribution of protein between mitochondria and cytosol. Cutaneous uptake and accumulation of Cd from the water was related to surface area while dietary uptake was influenced by the amount of sediment passing through the gut. Irrespective of exposure route, Cd......, whereas MC contained the highest Cd content followed by MI, DE and CY fractions in AO worms. Our results stress the importance of exposure route for the internal distribution and toxicity of Cd to deposit feeders such as Capitella sp. I. (C) 2003 Elsevier Ltd. All rights reserved....

  11. Benthic nitrogen loss in the Arabian Sea off Pakistan

    Directory of Open Access Journals (Sweden)

    Sarah eSokoll

    2012-11-01

    Full Text Available A pronounced deficit of nitrogen (N in the oxygen minimum zone (OMZ of theArabian Sea suggests the occurrence of heavy N-loss that is commonly attributed to pelagicprocesses. However, the OMZ water is in direct contact with sediments on three sides of thebasin. Contribution from benthic N-loss to the total N-loss in the Arabian Sea remains largelyunassessed. In October 2007, we sampled the water column and surface sediments along atransect cross-cutting the Arabian Sea OMZ at the Pakistan continental margin, covering arange of station depths from 360 to 1430 m. Benthic denitrification and anammox rates weredetermined by using 15N-stable isotope pairing experiments. Intact core incubations showeddeclining rates of total benthic N-loss with water depth from 0.55 to 0.18 mmol N m-2 d-1.While denitrification rates measured in slurry incubations decreased from 2.73 to 1.46 mmolN m-2 d-1 with water depth, anammox rates increased from 0.21 to 0.89 mmol N m-2 d-1.Hence, the contribution from anammox to total benthic N-loss increased from 7% at 360 m to40% at 1430 m. This trend is further supported by the quantification of nirS, the biomarkerfunctional gene encoding for cytochrome cd1-nitrite reductases of microorganisms involved inboth N-loss processes. Anammox-like nirS genes within the sediments increased in proportionto total nirS gene copies with water depth. Moreover, phylogenetic analyses of nirS revealeddifferent communities of both denitrifying and anammox bacteria between shallow and deepstations. Together, rate measurement and nirS analyses showed that anammox, determined forthe first time in the Arabian Sea sediments, is an important benthic N-loss process at thecontinental margin off Pakistan, especially in the sediments at deeper water depths.Extrapolation from the measured benthic N-loss to all shelf sediments within the basinsuggests that benthic N-loss may be responsible for about half of the overall N-loss in theArabian Sea.

  12. Native and non-indigenous boring polychaetes in Chile: a threat to native and commercial mollusc species Poliquetos perforadores nativos y no indígenas en Chile: una amenaza para moluscos nativos y comerciales

    Directory of Open Access Journals (Sweden)

    RODRIGO A MORENO

    2006-06-01

    Full Text Available Boring polychaetes infesting the shells of aquacultured molluscs affect host fitness and cause serious economic problems for the aquaculture industry. In Chile, knowledge of the native and non-indigenous polychaete fauna associated with mollusc hosts is limited, in spite of the fact that numerous native and non-indigenous mollusc species are actively harvested. We present the first complete list of boring polychaete species present in Chile, with a review of the information regarding each species' status as a native or non-indigenous species (NIS, together with information on native and introduced ranges, affected host species, likely vectors of introduction and donor areas. We recorded a total of nine boring polychaetes present along the Chilean coast including native and NIS. Within the NIS category we provide the first published report of the Sabellid Terebrasabella heterouncinata in South America. Boring polychaetes utilized both native and introduced host species. The finding of polychaete species which utilized multiple native and NIS hosts, indicates a potential risk for spread between aquaculture facilities and the natural environment. Our analysis suggests that aquaculture activities are probably the primary introduction vector for boring polychaete species to Chile and that this region does not differ in the magnitude of introduced boring polychaetes relative to other regions of the world. We discuss current laws and management regarding polychaete infestations and make recommendations for future management in Chile, which should contemplate a rational compromise between the socio-economic needs of the country and plans to protect and preserve the nation's biodiversityLa colonización de especies de poliquetos perforadores sobre conchas de moluscos de cultivos puede afectar la adecuación biológica del hospedador y causar serios problemas económicos para la industria acuícola. En Chile, el conocimiento de la fauna de poliquetos

  13. Floating mucus aggregates derived from benthic microorganisms on rocky intertidal reefs: Potential as food sources for benthic animals

    Science.gov (United States)

    Tamura, Y.; Tsuchiya, M.

    2011-09-01

    Mucus films, flocs or foams consisting of fine sand, algae and detritus frequently occur in the surface waters of rocky intertidal reef flats during incoming tide. These masses are referred to as mucus aggregates. We examined the developmental process of mucus aggregates and their abundance, distribution, migration and trophic composition. The trophic composition of mucus aggregates was then compared to those of sediments to evaluate their potential nutritional value for benthic animals. The organic matter content, chlorophyll a concentration, microalgal density and bacteria-derived fatty acid contents of mucus aggregates were higher than those observed in sediment, suggesting that mucus aggregates contain not only high levels of organic matter but also dense concentrations of microalgae and bacteria; therefore, mucus aggregates may serve as a qualitatively more energetic food source for benthic fauna compared to sediments. Benthic diatoms were the most abundant organisms in mucus aggregates. Large numbers of diatoms were trapped in fine mineral particles and mucilage-like strings, suggesting that a portion of the mucus is secreted by these benthic microalgae. Mucus aggregate accounted for only 0.01-3.9% of the daily feeding requirements of the dominant detritivore, Ophiocoma scolopendrina (Echinodermata: Ophiuroidea) over the entire sampling area. In contrast, for the species population on the back reef, where mucus aggregates ultimately accumulate, mucus aggregates provided from 0.4 to 113.3% of food for this species. These results suggest that mucus aggregate availability varies spatiotemporally and that they do not always provide adequate food sources for O. scolopendrina populations.

  14. A review of benthic fauna biodiversity in Georgia

    Directory of Open Access Journals (Sweden)

    B. Japoshvili

    2016-03-01

    Full Text Available The paper summarizes information on diversity of benthic fauna of Georgia based on the literature sources. 126 publications were analyzed published after 1899. Our investigation showed that 15 lotic and 20 lentic ecosystems were studied out of which 21 (5 rivers and 16 lakes belongs to the Caspian Sea basin and 14 (10 rivers and 4 lakes to the Black Sea basin. As a result, 206 benthic animal taxa were described. From the described groups 81 are identified to the species level, 61 to the genus level, 28 to the family level, 16 to the order level, 10 to the class level, 10 to the phylum level. Since the most of observed freshwater systems are poorly studied, Paravani and Saghamo Lakes, Tsalka and Tbilisi Reservoirs and Kura (Mtkvari and Rioni Rivers are rather well investigated. Our meta-analyses clearly show that in overall freshwater biodiversity of Georgia are significantly understudied.

  15. Unified Geomorphological Analysis Workflows with Benthic Terrain Modeler

    Directory of Open Access Journals (Sweden)

    Shaun Walbridge

    2018-03-01

    Full Text Available High resolution remotely sensed bathymetric data is rapidly increasing in volume, but analyzing this data requires a mastery of a complex toolchain of disparate software, including computing derived measurements of the environment. Bathymetric gradients play a fundamental role in energy transport through the seascape. Benthic Terrain Modeler (BTM uses bathymetric data to enable simple characterization of benthic biotic communities and geologic types, and produces a collection of key geomorphological variables known to affect marine ecosystems and processes. BTM has received continual improvements since its 2008 release; here we describe the tools and morphometrics BTM can produce, the research context which this enables, and we conclude with an example application using data from a protected reef in St. Croix, US Virgin Islands.

  16. 2010 NCCA oligochaete trophic index results to inform benthic ...

    Science.gov (United States)

    Over 400 sites were sampled in the nearshore of the U.S. Great Lakes during the National Coastal Condition Assessment (NCCA) field survey in summer 2010. To assess benthic ecological condition, 393 PONARs were attempted, and collected macroinvertebrates were identified and enumerated. Biological condition at each site was classified as good, fair or poor using the Oligochaete Trophic Index (OTI). The Great Lakes coasts were then classified by calculating percent area within a condition class: good (20.3%), fair (11.6%), and poor (18.0%). Due to unsuccessful PONARs, unclassified oligochaetes or no oligochaetes captured, 50.1% of the sampled area was classified as missing. In order to help focus future discussion and development of a Great Lakes benthic index, OTI results were compared to other traditional biotic integrity indices. In addition, unclassified sites were examined to determine possible methods or metrics that could prevent missing data in a newly developed index. not applicable

  17. An assessment of benthic condition in several small watersheds of the Chesapeake Bay, USA.

    Science.gov (United States)

    Leight, Andrew K; Slacum, Ward H; Wirth, Ed F; Fulton, Mike H

    2011-05-01

    We examined benthic condition in three small watersheds in the Chesapeake Bay. Characterization of benthic condition was based on the combined measurements of benthic fauna, sediment toxicity, and sediment contaminant loads. Significant differences between watersheds were detected for sediment contaminant concentrations and water quality. The intensity of benthic impairment was greatest in the river surrounded by the most developed watershed. Spatial patterns of benthic condition were detected within all three watersheds. In contrast to current, intense focus on nutrient pollution in the Chesapeake Bay, qualitative comparison of our findings to land-use patterns supports findings of other studies that suggest benthic condition in tributaries of the Chesapeake Bay may more closely relate to urbanization than agricultural land uses.

  18. A benthic quality index for European alpine lakes

    Directory of Open Access Journals (Sweden)

    Bruno Rossaro

    2012-10-01

    Full Text Available The development of benthic quality indices for European lakes is hindered by the lack of information concerning many national lake types and pressures. Most information is from north European lakes stressed by acidification and from deep lakes subjected to eutrophication; for other lake types (the ones included in the Mediterranean areas for example and for other pressures (hydro-morphological alteration, toxic stress there is practically no information about the response of benthic macro-invertebrates; this hinders the possibility of an intercalibration of the indices among the member states (MS in the EU. In the present communication three benthic quality indices are proposed considering the littoral, sublittoral and profundal zone in 5 reference and 7 non reference lakes from the Alpine region in response to eutrophication. The sensitivity values of the 177 species found in these lakes were calculated taking a weighted average of the values of environmental variables from lakes in which the species were present. The indicator taxa which prevailed in these lakes were Chironomids and Oligochaetes. A coinertia analysis emphasized the importance of trophic variables (transparency, nitrates, total phosphorous in explaining the species distribution, but geographic (altitude and morphometric (depth, volume variables were also important. The indices enabeled a separation of reference from non-reference lakes and to assign the non-reference lakes to different quality classes in agreement with the Water Framework Directive.doi: 10.5324/fn.v31i0.1364.Published online: 17 October 2012. 

  19. Macroevolutionary interplay between planktic larvae and benthic predators

    Science.gov (United States)

    Peterson, Kevin J.

    2005-12-01

    Many marine invertebrates have a complex life cycle in which the egg develops into an intermediate planktic larval form rather than developing directly to the benthic juvenile stage. Because of the evolutionary and ecological complexity of pelagic-benthic life cycles, the reasons behind the origin of larvae and their subsequent maintenance over geological time are not well understood. Using both a molecular clock and the fossil record, I show that the initial exploitation of the predator-free pelagic realm by lecithotrophic larvae was achieved independently multiple times by the end of the Early Cambrian, and that the convergent evolution of planktotrophy from lecithotrophic ancestors evolved between the latest Cambrian and Middle Ordovician at least four, and possibly as many as eight, times. Both the exploitation of the pelagic realm by nonfeeding larvae and the acquisition of planktotrophy correlate in time with novel modes of benthic predation, including the dramatic rise in the number and type of epifaunal suspension feeders in the Early Ordovician.

  20. BENTHIC FORAMINIFERA IN SOUTH WAIGEO WATERS, RAJA AMPAT, WEST PAPUA

    Directory of Open Access Journals (Sweden)

    Suhartini M. Natsir

    2017-07-01

    Full Text Available Waigeo Island is one of four large islands of the Raja Ampat group, West Papua Province. This area lies in the heart of the coral triangle region as the most marine bio-diversity on Earth. Coral reef ecosystem of the Waigeo is a favorable habitat for various organisms including foraminifera. Foraminifera have been proven as useful indicator of water quality surrounding the coral reef environment since FORAM Index was formulated. It gives additional importance of foraminifera beside their common uses on micropalaeontology for petroleum industry and palaeoecology. Therefore, it is very important to obtain data of the benthic foraminifera from various coral reef environments in Indonesia, such as around Waigeo Island. Sediment samples of this study were collected from 12 sites in southern part off Waigeo Island, on July 2011. Observation on benthic foraminifera shows that the study area is dominated by symbiotic bearing benthic foraminifera, Amphistegina lessonii, belongs to Suborder Rotaliina. This occurrence increases the values of FORAM Index (FI at certain sites. Generally, the values of FI from most sites are high (FI>4 that provide a good indication for reef growth or recovery. The values of FI less than 2 are found at RJ3 and RJ4 indicate stress environment for reef growth and they are dominated by opportunistic and heterotrophic functional groups of Elphidium and Quinqueloculina.

  1. Modelling temporal and spatial dynamics of benthic fauna in North-West-European shelf seas

    Science.gov (United States)

    Lessin, Gennadi; Bruggeman, Jorn; Artioli, Yuri; Butenschön, Momme; Blackford, Jerry

    2017-04-01

    Benthic zones of shallow shelf seas receive high amounts of organic material. Physical processes such as resuspension, as well as complex transformations mediated by diverse faunal and microbial communities, define fate of this material, which can be returned to the water column, reworked within sediments or ultimately buried. In recent years, numerical models of various complexity and serving different goals have been developed and applied in order to better understand and predict dynamics of benthic processes. ERSEM includes explicit parameterisations of several groups of benthic biota, which makes it particularly applicable for studies of benthic biodiversity, biological interactions within sediments and benthic-pelagic coupling. To assess model skill in reproducing temporal (inter-annual and seasonal) dynamics of major benthic macrofaunal groups, 1D model simulation results were compared with data from the Western Channel Observatory (WCO) benthic survey. The benthic model was forced with organic matter deposition rates inferred from observed phytoplankton abundance and model parameters were subsequently recalibrated. Based on model results and WCO data comparison, deposit-feeders exert clear seasonal variability, while for suspension-feeders inter-annual variability is more pronounced. Spatial distribution of benthic fauna was investigated using results of a full-scale NEMO-ERSEM hindcast simulation of the North-West European Shelf Seas area, covering the period of 1981-2014. Results suggest close relationship between spatial distribution of biomass of benthic faunal functional groups in relation to bathymetry, hydrodynamic conditions and organic matter supply. Our work highlights that it is feasible to construct, implement and validate models that explicitly include functional groups of benthic macrofauna. Moreover, the modelling approach delivers detailed information on benthic biogeochemistry and food-web at spatial and temporal scales that are unavailable

  2. Application of TSL Underwater Robots (AUV) for Investigation of Benthic Ecosystems and Quantification of Benthic Invertebrate Reserves

    Science.gov (United States)

    Golikov, S. Yu; Dulepov, V. I.; Maiorov, I. S.

    2017-11-01

    The issues on the application of autonomous underwater vehicles for assessing the abundance, biomass, distribution and reserves of invertebrates in the marine benthic ecosystems and on the environmental monitoring are discussed. An example of the application of methodology to assess some of the quantitative characteristics of macrobenthos is provided based upon using the information obtained from the TSL AUV in the Peter the Great Gulf (the Sea of Japan) in the Bay of Paris and the Eastern Bosphorus Strait within the area of the bridge leading to the Russian island. For the quantitative determination of the benthic invertebrate reserves, the values of biomass density of specific species are determined. Based on the data of direct measurements and weightings, the equations of weight dependencies on the size of animals are estimated according to the studied species that are well described by the power law dependence.

  3. Turbidites and Benthic Faunal Succession in the Deep Sea: An Ecological Paradox

    National Research Council Canada - National Science Library

    Young, David

    2001-01-01

    Characteristics of benthic faunal succession following turbidity flows in the deep sea will vary according to the composition of turbidite materials, the spatial scales of deposition, the structure...

  4. Distribution of benthic foraminifera along the Iranian Coast

    Science.gov (United States)

    Amao, Abduljamiu; Kaminski, Michael

    2017-04-01

    This study focuses on the distribution of benthic foraminifera along the Iranian coast of the Gulf from the northeast close to Shatt Al-Arab/Arvand Rud to the southeast near the Strait of Hormuz where it connects to the Indian Ocean. The Gulf is a naturally stressed environment due to extremes of salinity, temperatures and anthropogenic influences such as rapid urbanization projects, maritime transport, large numbers of desalination plants and oil platforms. These activities over time continue to compound the already stressed environment. Historical records on foraminiferal diversity and distribution in the Gulf commonly underestimate its benthic foraminiferal composition and diversity. Thirty-two samples collected from depths ranging between 20 to 45 m were analyzed for total foraminiferal assemblages. A total of 224 benthic foraminiferal species and subspecies belonging to 63 genera, 34 families, 22 superfamilies and 6 orders were recognized. The assemblages are dominated by hyaline taxa (45.3%) and porcelaneous foraminiferal (35.3%), while agglutinated foraminiferal groups are comprise a lower proportion (19.4%). The ten most abundant genera include Asterorotalia (13.3%), Quinqueloculina (12.4%), Bolivina (9.8%), Nonion (8.6%), Ammonia (5.5%), Textularia (5.4%), Elphidium (5.2%), Cibicides (3.9%), Challengerella (3.6%) and Hanzawaia (3.4%). The most common species are Nonion sp. 1 (5.45%), Asterorotalia dentata (5.03%), Quinqueloculina sp. 1 (4.8%), Nonion sp. 2 (4.5%), Rotalinoides cf. R. gaimardii (3.3%), Asterorotalia sp. 3 (3.2%), Quinqueloculina sp. 8 (3.1%), Bolivina cf. B. persiensis (3.0%), Bolivina cf. B. striatula (2.9%), and Ammonia sp. 1 (2.9%). We speculate that feeding strategy, e.g., herbivore (Nonion, Ammonia, Elphidium and Asterorotalia), the proportion of finer sediments (mud), availability of nutrients and presence of oxygen are factors controlling the diversity and distribution of benthic foraminifera in the Gulf. Due to the importance of

  5. Short-term impact of blue mussel dredging ( Mytilus edulis L.) on a benthic community

    DEFF Research Database (Denmark)

    Dolmer, Per; Kristensen, T.; Christiansen, M.L.

    2001-01-01

    The short-term effect of mussel dredging in a brackish Danish sound was studied. A commercial dredging track was identified and an analysis of the species composition inside the track and at an adjacent control area showed that dredging changed the community structure by reducing the density...... of polychaetes. In order to investigate the extent and the duration of the dredging impact experimental dredging was conducted. The experimental dredging removed 50% of the mussels in two dredged areas. Immediately after dredging, a significantly lower number of species was measured inside the mussel beds...... outside the mussel beds just after dredging, but this effect lasted for less than 7 days. After dredging, brown shrimps, C. crangon invaded the dredged areas. This species is an important predator of smaller invertebrates, and it is suspected that it was feeding on small vulnerable polychaetes exposed...

  6. Benthic infaunal communities around two artificial reefs in Mamala Bay, Oahu, Hawaii.

    Science.gov (United States)

    Fukunaga, Atsuko; Bailey-Brock, Julie H

    2008-04-01

    Non-fishery use of artificial reefs has been given attention in recent years. The primary concern associated with non-fishery artificial reefs is their effects to the surrounding ecosystems. This study examined the infaunal communities around two non-fishery artificial reefs (the sunken vessels YO257 and Sea Tiger) in Mamala Bay, Hawaii. Infaunal community structures at these artificial reefs were relatively similar to one at a nearly natural patch reef. A large amount of basalt gravel around YO257 associated with its deployment operation possibly had an effect on the surrounding community by increasing pore space. Polychaete assemblages were compared with existing data throughout the bay, and this revealed that the variation in sediment grain sizes and depths seemed to play some role in structuring the polychaete communities. Nevertheless, the infaunal communities around the artificial reefs were typical and within the range of natural variation in Mamala Bay, supporting their beneficial uses in ecotourism.

  7. Do benthic biofilters contribute to sustainability and restoration of the benthic environment impacted by offshore cage finfish aquaculture?

    International Nuclear Information System (INIS)

    Aguado-Gimenez, F.; Piedecausa, M.A.; Carrasco, C.; Gutierrez, J.M.; Aliaga, V.; Garcia-Garcia, B.

    2011-01-01

    Highlights: → Benthic biofilters were deployed under an offshore fish farm and in control locations. → We checked the farm influence on fouling, wild fish and sediment near the biofilters. → Fouling under the cages used fish farm-derived wastes, but at low efficiency. → Wild fish were more abundant in the biofilters located below the cages. → Despite these clear benefits, sediment quality around the biofilters did not improve. - Abstract: Benthic biofilters were deployed under a cage fish farm and in two reference locations to assess the influence of the farm on the biofilters and the surroundings, as well as to verify the usefulness of this technology as a mitigation tool. The biofilters underneath the farm recruited a fouling community practically identical to that of the control biofilters, which included a variety of trophic strategies. The former showed a higher 15 N enrichment, indicating that fouling beneath the farm was benefiting from the farm waste. The waste retention efficiency was low (0.02 g N m -2 month -1 ) beneath the farm. Benthic biofilters aggregated demersal wild fish around and within them. Pelagic wild fish also frequently used the biofilters beneath the farm, forming compact shoals around them. The increased complexity of the habitat below the fish farm enhanced biodiversity, but this improvement did not lead to the recovery of the sediments around the biofilters.

  8. A Servicewide Benthic Mapping Program for National Parks

    Science.gov (United States)

    Moses, Christopher S.; Nayegandhi, Amar; Beavers, Rebecca; Brock, John

    2010-01-01

    In 2007, the National Park Service (NPS) Inventory and Monitoring Program directed the initiation of a benthic habitat mapping program in ocean and coastal parks in alignment with the NPS Ocean Park Stewardship 2007-2008 Action Plan. With 74 ocean and Great Lakes parks stretching over more than 5,000 miles of coastline across 26 States and territories, this Servicewide Benthic Mapping Program (SBMP) is essential. This program will deliver benthic habitat maps and their associated inventory reports to NPS managers in a consistent, servicewide format to support informed management and protection of 3 million acres of submerged National Park System natural and cultural resources. The NPS and the U.S. Geological Survey (USGS) convened a workshop June 3-5, 2008, in Lakewood, Colo., to discuss the goals and develop the design of the NPS SBMP with an assembly of experts (Moses and others, 2010) who identified park needs and suggested best practices for inventory and mapping of bathymetry, benthic cover, geology, geomorphology, and some water-column properties. The recommended SBMP protocols include servicewide standards (such as gap analysis, minimum accuracy, final products) as well as standards that can be adapted to fit network and park unit needs (for example, minimum mapping unit, mapping priorities). SBMP Mapping Process. The SBMP calls for a multi-step mapping process for each park, beginning with a gap assessment and data mining to determine data resources and needs. An interagency announcement of intent to acquire new data will provide opportunities to leverage partnerships. Prior to new data acquisition, all involved parties should be included in a scoping meeting held at network scale. Data collection will be followed by processing and interpretation, and finally expert review and publication. After publication, all digital materials will be archived in a common format. SBMP Classification Scheme. The SBMP will map using the Coastal and Marine Ecological

  9. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitats, Key Benthic Species, and Marine Debris Sightings of the Pacific Remote Island Areas from 2017-04-02 to 2017-04-20 (NCEI Accession 0164023)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  10. Benthic cover derived from analysis of benthic images collected at coral reef sites in Batangas, Philippines from 2015-05-23 to 2015-06-03 (NCEI Accession 0162828)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The benthic cover data described here result from benthic photo-quadrat surveys conducted by the NOAA Coral Reef Ecosystem Program (CREP) in 2015 along transects at...

  11. Pacific Reef Assessment and Monitoring Program: Towed-diver Surveys of Benthic Habitat, Key Benthic Species, including Marine Debris Sightings, of the U.S. Pacific Reefs from 2000 to 2012

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  12. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitat, Key Benthic Species, including Marine Debris Sightings, of American Samoa from 2015-02-15 to 2015-03-23 (NCEI Accession 0157566)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  13. Pacific Reef Assessment and Monitoring Program: Towed-diver Surveys of Benthic Habitats, Key Benthic Species, and Marine Debris Sightings of the U.S. Pacific Reefs from 2000-09-09 to 2012-05-19 (NCEI Accession 0163745)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  14. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitat, Key Benthic Species, including Marine Debris Sightings, of the Hawaiian Archipelago from 2016-07-13 to 2016-09-26 (NCEI Accession 0157565)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  15. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitat, Key Benthic Species, including Marine Debris Sightings, of the Pacific Remote Island Areas from 2015-01-26 to 2015-04-26 (NCEI Accession 0157564)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  16. National Coral Reef Monitoring Program: Towed-diver Surveys of Benthic Habitats, Key Benthic Species, and Marine Debris Sightings of the Mariana Archipelago from 2017-05-04 to 2017-06-20 (NCEI Accession 0166629)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The towed-diver method is used to conduct benthic surveys, assessing large-scale disturbances (e.g., bleaching) and quantifying benthic components such as habitat...

  17. Adaptation and acclimatization to ocean acidification in marine ectotherms: an in situ transplant experiment with polychaetes at a shallow CO2 vent system.

    Science.gov (United States)

    Calosi, Piero; Rastrick, Samuel P S; Lombardi, Chiara; de Guzman, Heidi J; Davidson, Laura; Jahnke, Marlene; Giangrande, Adriana; Hardege, Jörg D; Schulze, Anja; Spicer, John I; Gambi, Maria-Cristina

    2013-01-01

    Metabolic rate determines the physiological and life-history performances of ectotherms. Thus, the extent to which such rates are sensitive and plastic to environmental perturbation is central to an organism's ability to function in a changing environment. Little is known of long-term metabolic plasticity and potential for metabolic adaptation in marine ectotherms exposed to elevated pCO2. Consequently, we carried out a series of in situ transplant experiments using a number of tolerant and sensitive polychaete species living around a natural CO2 vent system. Here, we show that a marine metazoan (i.e. Platynereis dumerilii) was able to adapt to chronic and elevated levels of pCO2. The vent population of P. dumerilii was physiologically and genetically different from nearby populations that experience low pCO2, as well as smaller in body size. By contrast, different populations of Amphiglena mediterranea showed marked physiological plasticity indicating that adaptation or acclimatization are both viable strategies for the successful colonization of elevated pCO2 environments. In addition, sensitive species showed either a reduced or increased metabolism when exposed acutely to elevated pCO2. Our findings may help explain, from a metabolic perspective, the occurrence of past mass extinction, as well as shed light on alternative pathways of resilience in species facing ongoing ocean acidification.

  18. National Coral Reef Monitoring Program: Benthic Images Collected from Stratified Random Sites (StRS) across American Samoa in 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data described here are benthic habitat imagery that result from benthic photo-quadrat surveys conducted along transects at stratified random sites across...

  19. Benthic macroinvertebrate assemblages in the US nearshore zone of Lake Erie, 2009: Status and linkages to landscape-derived stressors

    Science.gov (United States)

    Benthic macroinvertebrate assemblages have been used as indicators of ecological condition because their responses integrate localized environmental conditions of the sediments and overlying water. Assemblages of benthic invertebrates in the near coastal region are of particular...

  20. Hydrologic controls on basin-scale distribution of benthic macroinvertebrates

    Science.gov (United States)

    Bertuzzo, E.; Ceola, S.; Singer, G. A.; Battin, T. J.; Montanari, A.; Rinaldo, A.

    2013-12-01

    The presentation deals with the role of streamflow variability on basin-scale distributions of benthic macroinvertebrates. Specifically, we present a probabilistic analysis of the impacts of the variability along the river network of relevant hydraulic variables on the density of benthic macroinvertebrate species. The relevance of this work is based on the implications of the predictability of macroinvertebrate patterns within a catchment on fluvial ecosystem health, being macroinvertebrates commonly used as sensitive indicators, and on the effects of anthropogenic activity. The analytical tools presented here outline a novel procedure of general nature aiming at a spatially-explicit quantitative assessment of how near-bed flow variability affects benthic macroinvertebrate abundance. Moving from the analytical characterization of the at-a-site probability distribution functions (pdfs) of streamflow and bottom shear stress, a spatial extension to a whole river network is performed aiming at the definition of spatial maps of streamflow and bottom shear stress. Then, bottom shear stress pdf, coupled with habitat suitability curves (e.g., empirical relations between species density and bottom shear stress) derived from field studies are used to produce maps of macroinvertebrate suitability to shear stress conditions. Thus, moving from measured hydrologic conditions, possible effects of river streamflow alterations on macroinvertebrate densities may be fairly assessed. We apply this framework to an Austrian river network, used as benchmark for the analysis, for which rainfall and streamflow time-series and river network hydraulic properties and macroinvertebrate density data are available. A comparison between observed vs "modeled" species' density in three locations along the examined river network is also presented. Although the proposed approach focuses on a single controlling factor, it shows important implications with water resources management and fluvial

  1. Antarctic sea ice losses drive gains in benthic carbon drawdown.

    Science.gov (United States)

    Barnes, D K A

    2015-09-21

    Climate forcing of sea-ice losses from the Arctic and West Antarctic are blueing the poles. These losses are accelerating, reducing Earth's albedo and increasing heat absorption. Subarctic forest (area expansion and increased growth) and ice-shelf losses (resulting in new phytoplankton blooms which are eaten by benthos) are the only significant described negative feedbacks acting to counteract the effects of increasing CO2 on a warming planet, together accounting for uptake of ∼10(7) tonnes of carbon per year. Most sea-ice loss to date has occurred over polar continental shelves, which are richly, but patchily, colonised by benthic animals. Most polar benthos feeds on microscopic algae (phytoplankton), which has shown increased blooms coincident with sea-ice losses. Here, growth responses of Antarctic shelf benthos to sea-ice losses and phytoplankton increases were investigated. Analysis of two decades of benthic collections showed strong increases in annual production of shelf seabed carbon in West Antarctic bryozoans. These were calculated to have nearly doubled to >2x10(5) tonnes of carbon per year since the 1980s. Annual production of bryozoans is median within wider Antarctic benthos, so upscaling to include other benthos (combined study species typically constitute ∼3% benthic biomass) suggests an increased drawdown of ∼2.9x10(6) tonnes of carbon per year. This drawdown could become sequestration because polar continental shelves are typically deeper than most modern iceberg scouring, bacterial breakdown rates are slow, and benthos is easily buried. To date, most sea-ice losses have been Arctic, so, if hyperboreal benthos shows a similar increase in drawdown, polar continental shelves would represent Earth's largest negative feedback to climate change. Copyright © 2015 Elsevier Ltd. All rights reserved.

  2. Traditional Ecological Knowledge and the mapping of benthic marine habitats.

    Science.gov (United States)

    Teixeira, João Batista; Martins, Agnaldo Silva; Pinheiro, Hudson Tercio; Secchin, Nelio Augusto; Leão de Moura, Rodrigo; Bastos, Alex Cardoso

    2013-01-30

    Traditional Ecological Knowledge (TEK) is the empirically accumulated knowledge of local communities whose livelihoods depend directly on natural resources. TEK has a considerable potential as a reliable, rapid and low cost information source. However, its use for decision making in environmental management is frequently challenged due to the lack of scientific validation and the multiple and poorly understood biases deriving from measurement and analytical errors, as well as from political, cultural and religious sources. During the planning stage of a Marine Protected Area (MPA) in Southeastern Brazil we assessed fisherfolk TEK regarding seabed features, comparing it with results from a conventional oceanographic assessment. TEK was acquired and synthesized during a survey involving 19 fishing villages and a consensus analysis that minimized variation among individual fisherfolks and communities. The oceanographic survey included high resolution benthic habitat mapping tools such as sidescan sonar and ground-truthing with SCUBA near the interfaces of benthic features identified by fisherfolk. Nearly 3000 km(2) of seafloor were mapped by local fisherfolk as "gravel", "sand", "mud" and "reef structures", while side-scan sonar surveys covered approximately 360 km with an average 400 m swath. Analyses of overlap and proximity showed that TEK is relatively cost-effective and accurate for large-scale benthic surveys, especially as a starting point for planning oceanographic surveys. Moreover, including TEK in the planning stage of MPAs may increase communities' participation and understanding of the costs and benefits of the new access and fishing effort regulations. Copyright © 2012 Elsevier Ltd. All rights reserved.

  3. Deep-sea benthic footprint of the deepwater horizon blowout.

    Directory of Open Access Journals (Sweden)

    Paul A Montagna

    Full Text Available The Deepwater Horizon (DWH accident in the northern Gulf of Mexico occurred on April 20, 2010 at a water depth of 1525 meters, and a deep-sea plume was detected within one month. Oil contacted and persisted in parts of the bottom of the deep-sea in the Gulf of Mexico. As part of the response to the accident, monitoring cruises were deployed in fall 2010 to measure potential impacts on the two main soft-bottom benthic invertebrate groups: macrofauna and meiofauna. Sediment was collected using a multicorer so that samples for chemical, physical and biological analyses could be taken simultaneously and analyzed using multivariate methods. The footprint of the oil spill was identified by creating a new variable with principal components analysis where the first factor was indicative of the oil spill impacts and this new variable mapped in a geographic information system to identify the area of the oil spill footprint. The most severe relative reduction of faunal abundance and diversity extended to 3 km from the wellhead in all directions covering an area about 24 km(2. Moderate impacts were observed up to 17 km towards the southwest and 8.5 km towards the northeast of the wellhead, covering an area 148 km(2. Benthic effects were correlated to total petroleum hydrocarbon, polycyclic aromatic hydrocarbons and barium concentrations, and distance to the wellhead; but not distance to hydrocarbon seeps. Thus, benthic effects are more likely due to the oil spill, and not natural hydrocarbon seepage. Recovery rates in the deep sea are likely to be slow, on the order of decades or longer.

  4. Application of the Benthic Ecosystem Quality Index 2 to benthos in Dutch transitional and coastal waters

    NARCIS (Netherlands)

    Loon, van W.M.G.M.; Boon, A.R.; Gittenberger, A.; Walvoort, D.J.J.; Lavaleye, M.; Duineveld, G.C.A.; Verschoor, A.J.

    2015-01-01

    The Benthic Ecosystem Quality Index 2 (BEQI2) is the Dutch multi-metric index (MMI) for assessing the status and trend of benthic invertebrates in transitional and coastal waters for the Water Framework Directive (WFD). It contains the same indicators, i.e. species richness, Shannon index and

  5. Human exploitation and benthic community structure on a tropical intertidal mudflat

    NARCIS (Netherlands)

    Boer, de W.F.; Prins, H.H.T.

    2002-01-01

    Human exploitation of intertidal marine invertebrates is known to alter benthic community structure. This study describes the impact that harvesting by women and children has on the intertidal community structure of the mudflats of the Saco on Inhaca Island, Mozambique, by comparing the benthic

  6. Intertidal benthic community ecology of sand-dwelling macroinvertebrates of Goa beaches

    Digital Repository Service at National Institute of Oceanography (India)

    Harkantra, S.N.; Parulekar, A.H.

    , is relatively unstable, less productive, and supports a poor benthic fauna. In contrast, an estuarine beach at Siridao, having fine sand-grain size, is comparatively stable, more productive, and exhibits a rich fauna. This indicates the richness of benthic life...

  7. Modeling food web interactions in benthic deep-sea ecosystems. A practical guide

    NARCIS (Netherlands)

    Soetaert, K.E.R.; Van Oevelen, D.J.

    2009-01-01

    Deep-sea benthic systems are notoriously difficult to sample. Even more than for other benthic systems, many flows among biological groups cannot be directly measured, and data sets remain incomplete and uncertain. In such cases, mathematical models are often used to quantify unmeasured biological

  8. Benthic dinitrogen fixation traversing the oxygen minimum zone off Mauritania (NW Africa)

    DEFF Research Database (Denmark)

    Gier, Jessica; Löscher, Carolin R.; Dale, Andrew W.

    2017-01-01

    Nespite its potential to provide new nitrogen (N) to the environment, knowledge on benthic dinitrogen (N2) fixation remains relatively sparse, and its contribution to the marine N budget is regarded as minor. Benthic N2 fixation is often observed in organic-rich sediments coupled to heterotrophic...

  9. Competition for shelter between four invasive gobiids and two native benthic fish species

    NARCIS (Netherlands)

    Van Kessel, N.; Dorenbosch, M.; De Boer, M.R.M.; Leuven, R.S.E.W.; Van der Velde, G.

    2011-01-01

    Recent invasions by non-native gobiid fish species that are ongoing in the Western European rivers Rhine and Meuse, will lead to interactions with native benthic fish species. Since both non-native gobiids and native benthic species are bottom dwelling species with a preference for shelter during at

  10. Application of the Benthic Ecosystem Quality Index 2 to benthos in Dutch transitional and coastal waters

    NARCIS (Netherlands)

    Van Loon, W.M.G.M.; Boon, A.R.; Gittenberger, A.; Walvoort, D.J.J.; Lavaleye, M.S.S.; Duineveld, G.C.A.; Verschoor, A.J.

    2015-01-01

    The Benthic Ecosystem Quality Index 2 (BEQI2) is the Dutch multi-metric index (MMI) for assessing the status and trend of benthic invertebrates in transitional and coastal waters for the Water Framework Directive (WFD). It contains the same indicators, i.e. species richness, Shannon index and AMBI,

  11. Distribution of benthic foraminifera within oxygen minima zone, off central west coast, India

    Digital Repository Service at National Institute of Oceanography (India)

    Mazumder, A.; Henriques, P.J.; Nigam, R.

    and analyzed to study the effect of oxygen minima zone on benthic foraminiferal habitat. Benthic foraminifera were studied upto specific level of identification. However, to get a better picture, and keeping in mind that oxygen minima zone in the Arabian Sea...

  12. Carbon flows in the benthic food web at the deep-sea observatory HAUSGARTEN (Fram Strait)

    NARCIS (Netherlands)

    Van Oevelen, D.; Bergmann, M.; Soetaert, K.E.R.; Bauerfeind, E.; Hasemann, C.; Klages, M.; Schewe, I.; Soltwedel, T.; Budaeva, N.E.

    2011-01-01

    The HAUSGARTEN observatory is located in the eastern Fram Strait (Arctic Ocean) and used as long-term monitoring site to follow changes in the Arctic benthic ecosystem. Linear inverse modelling was applied to decipher carbon flows among the compartments of the benthic food web at the central

  13. Stakeholder perceptions in fisheries management - Sectors with benthic impacts

    DEFF Research Database (Denmark)

    Soma, K.; Nielsen, J. R.; Papadopoulou, N.

    2018-01-01

    The capture fishing sector causes direct and indirect impacts on benthic habitats and associated fauna and flora. Effectiveness of new mitigation measures depends on fishermen's perceptions; their acceptance of, and compliance to, those measures. Accordingly, by means of Advisory Councils (ACs......), fisheries stakeholders are encouraged by the Common Fisheries Policy (CFP) reform to contribute to policy formulations. Still, the CFP reform remains unclear about how to possibly incorporate perceptions of specific conservation measures and objectives in practice. Against this background, this article aims....... In this way the ACs could better facilitate bottom-up participation in fisheries management by representing a wide range of stakeholder perceptions....

  14. Procedures for Radioecological Studies with Marine Benthic Invertebrates

    International Nuclear Information System (INIS)

    Vilquin, A.; Fowler, S.W.; Renfro, W.C.

    1976-01-01

    Methods for the collection transportation, and pre-experimental handling are briefly described. In designing radioecological experiments on marine benthic invertebrates it is important to prevent overcrowding and to choose healthy, well-acclimated animals. Feeding of the animals and presence or absence of sediments in the aquaria are critical variables in many experiments. Length of time the experiment is run and interim growth of the experimental animals may result in significant variability in results. The physico-chemical form of the radiotracer is another important experimental variable. (author)

  15. Procedures for radioecological studies with marine benthic invertebrates

    International Nuclear Information System (INIS)

    Vilquin, A.; Fowler, S.W.; Renfro, W.C.

    1975-01-01

    Methods for the collection, transportation, and pre-experimental handling are briefly described. In designing radioecological experiments on marine benthic invertebrates it is important to prevent overcrowding and to choose healthy, well-acclimated animals. Feeding of the animals and presence or absence of sediments in the aquaria are critical variables in many experiments. Length of time the experiment is run and interim growth of the experimental animals may result in significant variability in results. The physico-chemical form of the radiotracer is another important experimental variable. (author)

  16. Distribution pattern of benthic invertebrates in Danish estuaries

    DEFF Research Database (Denmark)

    Kristensen, Erik; Delefosse, Matthieu; Quintana, Cintia Organo

    2013-01-01

    The lack of a common statistical approach describing the distribution and dispersion pattern of marine benthic animals has often hampered the comparability among studies. The purpose of this study is therefore to apply an alternative approach, Taylor's power law, to data on spatial and temporal...... that this relationship is an inherent characteristic of Taylor's power law, and that b as a dispersion index may be biased by e.g. sampling errorswhen this relationship is weak. The correlation strength between b and log(a) could therefore be envisioned as a data quality check....

  17. Complexity and simplification in understanding recruitment in benthic populations

    KAUST Repository

    Pineda, Jesús

    2008-11-13

    Research of complex systems and problems, entities with many dependencies, is often reductionist. The reductionist approach splits systems or problems into different components, and then addresses these components one by one. This approach has been used in the study of recruitment and population dynamics of marine benthic (bottom-dwelling) species. Another approach examines benthic population dynamics by looking at a small set of processes. This approach is statistical or model-oriented. Simplified approaches identify "macroecological" patterns or attempt to identify and model the essential, "first-order" elements of the system. The complexity of the recruitment and population dynamics problems stems from the number of processes that can potentially influence benthic populations, including (1) larval pool dynamics, (2) larval transport, (3) settlement, and (4) post-settlement biotic and abiotic processes, and larval production. Moreover, these processes are non-linear, some interact, and they may operate on disparate scales. This contribution discusses reductionist and simplified approaches to study benthic recruitment and population dynamics of bottom-dwelling marine invertebrates. We first address complexity in two processes known to influence recruitment, larval transport, and post-settlement survival to reproduction, and discuss the difficulty in understanding recruitment by looking at relevant processes individually and in isolation. We then address the simplified approach, which reduces the number of processes and makes the problem manageable. We discuss how simplifications and "broad-brush first-order approaches" may muddle our understanding of recruitment. Lack of empirical determination of the fundamental processes often results in mistaken inferences, and processes and parameters used in some models can bias our view of processes influencing recruitment. We conclude with a discussion on how to reconcile complex and simplified approaches. Although it

  18. Accumulation of 210Po by benthic marine algae

    International Nuclear Information System (INIS)

    Gouvea, R.C.; Branco, M.E.C.; Santos, P.L.

    1988-01-01

    The accumulation of polonium 210 Po by various species of benthic marine seaweeds collected from 4 different points on the coast of Rio de Janeiro, showed variations by species and algal groups. The highest value found was in red alga, Plocamium brasiliensis followed by other organisms of the same group. In the group of the brown alga, the specie Sargassum stenophylum was outstanding. The Chlorophyta presented the lowest content of 210 Po. The algae collected in open sea, revealed greater concentration factors of 210 Po than the same species living in bays. The siliceous residue remaining after mineralization of the algae did not interfere with the detection of polonium. (author)

  19. Benthic phosphorus cycling in the Peruvian oxygen minimum zone

    Science.gov (United States)

    Lomnitz, Ulrike; Sommer, Stefan; Dale, Andrew W.; Löscher, Carolin R.; Noffke, Anna; Wallmann, Klaus; Hensen, Christian

    2016-03-01

    Oxygen minimum zones (OMZs) that impinge on continental margins favor the release of phosphorus (P) from the sediments to the water column, enhancing primary productivity and the maintenance or expansion of low-oxygen waters. A comprehensive field program in the Peruvian OMZ was undertaken to identify the sources of benthic P at six stations, including the analysis of particles from the water column, surface sediments, and pore fluids, as well as in situ benthic flux measurements. A major fraction of solid-phase P was bound as particulate inorganic P (PIP) both in the water column and in sediments. Sedimentary PIP increased with depth in the sediment at the expense of particulate organic P (POP). The ratio of particulate organic carbon (POC) to POP exceeded the Redfield ratio both in the water column (202 ± 29) and in surface sediments (303 ± 77). However, the POC to total particulate P (TPP = POP + PIP) ratio was close to Redfield in the water column (103 ± 9) and in sediment samples (102 ± 15). This suggests that the relative burial efficiencies of POC and TPP are similar under low-oxygen conditions and that the sediments underlying the anoxic waters on the Peru margin are not depleted in P compared to Redfield. Benthic fluxes of dissolved P were extremely high (up to 1.04 ± 0.31 mmol m-2 d-1), however, showing that a lack of oxygen promotes the intensified release of dissolved P from sediments, whilst preserving the POC / TPP burial ratio. Benthic dissolved P fluxes were always higher than the TPP rain rate to the seabed, which is proposed to be caused by transient P release by bacterial mats that had stored P during previous periods when bottom waters were less reducing. At one station located at the lower rim of the OMZ, dissolved P was taken up by the sediments, indicating ongoing phosphorite formation. This is further supported by decreasing porewater phosphate concentrations with sediment depth, whereas solid-phase P concentrations were comparatively

  20. Bipolar gene flow in deep-sea benthic foraminifera

    DEFF Research Database (Denmark)

    Pawlowski, J.; Fahrni, J.; Lecroq, B.

    2007-01-01

    Despite its often featureless appearance, the deep-ocean floor includes some of the most diverse habitats on Earth. However, the accurate assessment of global deep-sea diversity is impeded by a paucity of data on the geographical ranges of bottom-dwelling species, particularly at the genetic level....... Here, we present molecular evidence for exceptionally wide distribution of benthic foraminifera, which constitute the major part of deep-sea meiofauna. Our analyses of nuclear ribosomal RNA genes revealed high genetic similarity between Arctic and Antarctic populations of three common deep...

  1. ECOLOGICAL ASPECTS OF BENTHIC COMMUNITIES FROM SOMESUL CALD CATCHMENT AREA

    Directory of Open Access Journals (Sweden)

    Karina Battes

    2001-01-01

    Full Text Available The present paper represents a preliminary study of periphyton and zoobenthos community from the Someşul Cald catchment area. Zoobenthos was sampled seasonally during 2000. Benthic community structure was similar at the five sampling sites. Thus, mayflies and chironomids recorded high numerical percentage abundances and densities. Oligochaetes, water mites and caddisflies were identified to species level. 38 Oligochaeta, 28 water mite and 12 caddis fly species were found in the sampling period. The samplings collected in the year 2001 included 80 algal species belonging to 5 phyla. Diatoms (Bacillariophyta dominated both qualitatively and quantitatively at all sampling sites.

  2. National Coral Reef Monitoring Program: Benthic Percent Cover Derived from Analysis of Benthic Images Collected for Climate Stations across the Mariana Archipelago in 2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data described here result from benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and...

  3. National Coral Reef Monitoring Program: Benthic Percent Cover Derived from Analysis of Benthic Images Collected for Climate Stations across American Samoa in 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data described here result from benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and...

  4. National Coral Reef Monitoring Program: Benthic Percent Cover Derived from Analysis of Benthic Images Collected for Climate Stations across the Pacific Remote Island Areas since 2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data described here result from benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and...

  5. Benthic Percent Cover Derived from Analysis of Benthic Images Collected during Towed-diver Surveys of the U.S. Pacific Reefs Since 2003

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data products described herein are part of the NOAA Coral Reef Conservation Program (CRCP) funded projects aimed at documenting the status and trends for benthic...

  6. National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected during Stratified Random Surveys (StRS) across American Samoa in 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data described here result from benthic photo-quadrat surveys conducted along transects at stratified random sites across American Samoa in 2015 as a part of...

  7. National Coral Reef Monitoring Program: Benthic Percent Cover Derived from Analysis of Benthic Images Collected for Climate Stations across the Hawaiian Archipelago since 2013

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data described here result from benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and...

  8. National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected for Climate Stations across American Samoa in 2015 (NCEI Accession 0157753)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data described here result from benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and...

  9. The influence of reduced light intensity on the response of benthic diatoms to herbicide exposure.

    Science.gov (United States)

    Wood, Rebecca J; Mitrovic, Simon M; Lim, Richard P; Kefford, Ben J

    2016-09-01

    Herbicide pollution events in aquatic ecosystems often coincide with increased turbidity and reduced light intensity. It is therefore important to determine whether reduced light intensity can influence herbicide toxicity, especially to primary producers such as benthic diatoms. Benthic diatoms collected from 4 rivers were exposed to herbicides in 48 h rapid toxicity tests under high light (100 µmol m(-2)  s(-1) ) and low light (20 µmol m(-2)  s(-1) ) intensities. The effects of 2 herbicides (atrazine and glyphosate) were assessed on 26 freshwater benthic diatom taxa. There was no significant interaction of light and herbicide effects at the community level or on the majority (22 of 26) of benthic diatom taxa. This indicates that low light levels will likely have only a minor influence on the response of benthic diatoms to herbicides. Environ Toxicol Chem 2016;35:2252-2260. © 2016 SETAC. © 2016 SETAC.

  10. Benthic microalgal production in the Arctic: Applied methods and status of the current database

    DEFF Research Database (Denmark)

    Glud, Ronnie Nøhr; Woelfel, Jana; Karsten, Ulf

    2009-01-01

    the often very confusing terminology in the existing literature. Our compilation demonstrates that i) benthic microalgae contribute significantly to coastal ecosystem production in the Arctic, and ii) benthic microalgal production on average exceeds pelagic productivity by a factor of 1.5 for water depths......The current database on benthic microalgal production in Arctic waters comprises 10 peer-reviewed and three unpublished studies. Here, we compile and discuss these datasets, along with the applied measurement approaches used. The latter is essential for robust comparative analysis and to clarify...... down to 30 m. We have established relationships between irradiance, water depth and benthic microalgal productivity that can be used to extrapolate results from quantitative experimental studies to the entire Arctic region. Two different approaches estimated that current benthic microalgal production...

  11. Anti-inflammatory activity in selected Antarctic benthic organisms

    Directory of Open Access Journals (Sweden)

    Juan eMoles

    2014-07-01

    Full Text Available Antarctic benthos was prospected in search for anti-inflammatory activity in polar benthic invertebrates, in two different geographical areas: deep-bottoms of the Eastern Weddell Sea and shallow-waters of the South Shetland Islands. A total of 36 benthic algae and invertebrate species were selected to perform solubility tests in order to test them for anti-inflammatory activity. From these, ethanol extracts of ten species from five different phyla resulted suitable to be studied in cell macrophage cultures (RAW 264.7. Cytotoxicity (MTT method and production of inflammatory mediators (prostaglandin E2, leukotriene B4, interleukin-1 were determined at three extract concentrations (50, 125, 250 g/mL. Bioassays resulted in four different species showing anti-inflammatory activity corresponding to three sponges: Mycale (Oxymycale acerata, Isodictya erinacea, and I. toxophila; and one hemichordate: Cephalodiscus sp. These results show that Antarctic sessile invertebrates may have great value as a source of lead compounds with potential pharmaceutical applications.

  12. Benthic dinoflagellates from Red Sea, Egypt: Early records

    Directory of Open Access Journals (Sweden)

    Nermin El Semary

    2016-06-01

    Full Text Available Dinoflagellates from Red Sea are hardly studied, in particular the benthic forms. Samples collected from shallow intertidal zone, Ain Sokhna, Egypt were microscopically examined. Three genera with seven species were recorded. The most frequently-encountered was Katodinium sp., a small mushroom-like with epitheca being consistently larger than hypotheca. Light micrographs revealed the presence of a nucleus in the hyposome and descending cingulum. Scanning electromicrographs (SEM confirmed this orientation and revealed the presence of apical pore system. Another species showed similarity to the mushroom-like morphology but with large conical episome and small hyposome. Heterotrophic, naked Gyrodinium cf dominans and Gyrodinium sp. were also observed where in the former, there were conspicuous longitudinal striations. A frequently-observed species had naked Gyrodinium-like morphology but with much smaller size. One photosynthetic species had a characteristic stigma similar to type B eyespot in “dinotoms” and episome being slightly larger than hyposome. Gymnodinium sp. with sulcus extending slightly in the episome but deeply to the end of hyposome was also recorded. This genus is reported to be mostly toxic and its presence should be monitored. Finally, this study presents some early records for benthic dinophytes from rather underexplored locality and raises alerts about genus with reported toxicity.

  13. Influence of Spartina alterniflora and tide level on the structure of polychaete associations in an euryhallne salt marsh in cananéia lagoon estuarine region (SE Brazil

    Directory of Open Access Journals (Sweden)

    Fabiano da Silva Attolini

    1997-01-01

    Full Text Available Polychaete species composition, abundance and seasonal variation were analyzed in relation to Spartina alterniflora cover and tide level at Ponta do Arrozal, Cananéia, during 1989/1990. Two intertidal stations were located on the S. alterniflora bellt, one ca mean high water of neap tides (MHWN and the other ca mean high water of spring tides (MHWS. Two other stations were established at corresponding tide levels at an adjacent site devoid of vegetation. A total of 17 species were collected. Each station was sampled twice seasonally with a 20 cm of diameter corer. Capitella capitata, Isolda pulchella, Nereis oligohalina and Lumbrineris sp were the most abundant species. Statistically significant differences bettween the vegetated and bare sites considered were observed for the number of species, density, diversity and evenness, with their values being higher at the vegetated site. Multivariate analysis showed spatial variations of the fauna according to vegetation cover and tide level. In relation to vegetation cover, polychaetes assemblages were distinguishable mainly by individual species densities of the more common species, since the most abundant species were present at the vegetated and bare sites. In relation to tide level, the faunal densities and number of species at the MHWN station were significantly higher than those at the MHWS station mainly at the bare site.Analisou-se a composição, abundância e variação sazonal de espécies de poliquetas em relação à cobertura vegetal de Spartina alterniflora e o nível de maré na Ponta do Arrozal, Cananéia, nos anos 1989/1990. Duas estações entremarés foram estabelecidas no cinturão de S. alterniflora, uma na linha da média de marés altas de quadratura (LMMQ e outra, na linha da média de marés altas de sizígia (LMMS. Duas outras estações de coleta foram estabelecidas a níveis de maré correspondentes, em um local adjacente desprovido de vegetação. Cada estação foi

  14. Understanding the life of a sandy beach polychaete of functional importance - Scolelepis squamata (Polychaeta: Spionidae) on Belgian sandy beaches (northeastern Atlantic, North Sea)

    Science.gov (United States)

    Speybroeck, Jeroen; Alsteens, Lotte; Vincx, Magda; Degraer, Steven

    2007-08-01

    The cosmopolitan sandy beach polychaete Scolelepis squamata constitutes an important food resource for juvenile flatfish and wading birds in the northeastern Atlantic, thus playing an important role in sandy beach ecosystem functioning. However, its population dynamics and life history in this part of the world have gone widely uninvestigated. Eight beach transects on Belgian sandy beaches were sampled monthly from October 2003 until October 2004, in order to investigate seasonal trends in the species' abundance, biomass, secondary production, and patterns in reproduction and zonation. Average density, modal density and modal biomass (ash-free dry weight) (mean average density = 169 ± 9 SE ind/m 2; mean modal density = 505 ± 38 SE ind/m 2; mean modal biomass = 0.25 ± 0.02 SE g/m 2) did not exhibit major seasonal changes, whereas average biomass (0.081 ± 0.005 SE g/m 2) and individuals and biomass per strip transect (IST = 16286 ± 1330 SE ind/m; BMST = 7.8 + 0.7 SE g/m) did, peaking in May 2004. Production was calculated at 1.9 g/(m 2*year) (size-frequency method, SFM) and 0.88 g/(m 2*year) (mass specific growth rate method, MSGR) and mean annual biomass was 0.797 g/m 2; resulting in a P/B ratio of 2.40/year (SFM) and 1.11/year (MSGR), which is intermediate to moderately low compared to other polychaete species. Gravid individuals were found from February until August and a single recruitment period was observed from July until September. An average sex ratio of 1.41 ± 0.08 SE was calculated, with a female predominance. Highest densities (>200 ind/m 2) were mostly found above 3 m above MLLWS and at a median grain size from 190 to 320 μm. Average modal or peak density along each transect was situated from 3.95 m up to 4.40 m above MLLWS, in contrast to some other studies where the species was restricted to mid-tidal levels. Significant differences in elevation of peak density were found between non-gravid (411 ± 4 SE cm) and gravid (402 ± 5 SE cm) animals

  15. Trans-generational plasticity in physiological thermal tolerance is modulated by maternal pre-reproductive environment in the polychaete Ophryotrocha labronica.

    Science.gov (United States)

    Massamba-N'Siala, Gloria; Prevedelli, Daniela; Simonini, Roberto

    2014-06-01

    Maternal temperature is known to affect many aspects of offspring phenotype, but its effect on offspring physiological thermal tolerance has received less attention, despite the importance of physiological traits in defining organismal ability to cope with temperature changes. To fill this gap, we used the marine polychaete Ophryotrocha labronica to investigate the influence of maternal temperature on offspring upper and lower thermal tolerance limits, and assess whether maternal influence changed according to the stage of offspring pre-zygotic development at which a thermal cue was provided. Measurements were taken on adult offspring acclimated to 18 or 30°C, produced by mothers previously reared at 24°C and then exposed to 18 or 30°C at an early and late stage of oogenesis. When the shift from 24°C was provided early during oogenesis, mothers produced offspring with greater cold and heat tolerance whenever mother-offspring temperatures did not match, with respect to when they matched, suggesting the presence of an anticipatory maternal effect triggered by the thermal variation. Conversely, when the cue was provided later during oogenesis, more tolerant offspring were observed when temperatures persisted across generations. In this case, maternal exposure to 18 or 30°C may have benefited offspring performance, while limitations in the transmission of the thermal cue may account for the lack of correlation between maternal experiences and offspring performance when mother-offspring environments did not match. Our results provided evidence for a trans-generational effect of temperature on physiological performance characterised by a high context dependency, and are discussed in the light of maternal pre-reproductive experiences. © 2014. Published by The Company of Biologists Ltd.

  16. First record of the polychaete Ficopomatus uschakovi (Pillai, 1960 (Annelida, Serpulidae in the Colombian Caribbean, South America

    Directory of Open Access Journals (Sweden)

    Catalina Arteaga-Florez

    2014-01-01

    Full Text Available The genus Ficopomatus (Serpulidae consists of sessile, tubicolous polychaete annelid worms that may colonize a diversity of substrata, and tolerate considerable variations in salinity. Thus, members of this genus, including Ficopomatus uschakovi, in some cases are exotic and maybe invasive. The purpose of our research was to collect and identify marine organisms associated with the submerged roots of mangrove trees in the Gulf of Urabá, Colombian Caribbean, South America. Within the Gulf, there is a well-developed forest of the Red Mangrove, Rhizophora mangle, along the margins of El Uno Bay. We sampled the roots of R. mangle from five stations of the bay, and we identified specimens of F. uschakovi from each of those stations. Ficopomatus uschakovi was found to be more abundant in regions of the bay that exhibit the lowest salinity. Based on a morphological comparison of the present specimens with the original species description, revised descriptions, and other records from the Indo-West Pacific, Mexican Pacific, and Venezuelan and Brazilian Caribbean, we suggest that F. uschakovi has a broader geographical distribution. Furthermore, because of this broad distribution, and the observed tolerance for low salinity in our study, we also suggest that F. uschakovi is a euryhaline species. It is also likely that F. uschakovi will be found in other localities in the Gulf of Urabá, and in other regions of the Colombian Caribbean. Thus, this record extends the distribution of the species to the Colombian Caribbean, giving the species a continuous distribution across the northern coast of South America.

  17. Stable-isotope analysis of a deep-sea benthic-fish assemblage: evidence of an enriched benthic food web.

    Science.gov (United States)

    Boyle, M D; Ebert, D A; Cailliet, G M

    2012-04-01

    In this study, fishes and invertebrates collected from the continental slope (1000 m) of the eastern North Pacific Ocean were analysed using stable-isotope analysis (SIA). Resulting trophic positions (T(P) ) were compared to known diets and habitats from the literature. Dual isotope plots indicated that most species groups (invertebrates and fishes) sorted as expected along the carbon and nitrogen axes, with less intraspecific variability than interspecific variability. Results also indicated an isotopically distinct benthic and pelagic food web, as the benthic food web was more enriched in both nitrogen and carbon isotopes. Trophic positions from SIA supported this finding, resulting in the assignment of fishes to different trophic positions from those expected based on published dietary information. These differences can be explained largely by the habitat of the prey and the percentage of the diet that was scavenged. A mixing model estimated dietary contributions of prey similar to those of the known diet of Bathyraja trachura from stomach-content analysis (SCA). Linear regressions indicated that trophic positions calculated from SIA and SCA, when plotted against B. trachura total length for 32 individuals, exhibited similar variation and patterns. Only the T(P) from SCA yielded significant results (stomach content: P 0·05). © 2012 The Authors. Journal of Fish Biology © 2012 The Fisheries Society of the British Isles.

  18. Assessment of toxicity thresholds in aquatic environments: does benthic growth of diatoms affect their exposure and sensitivity to herbicides?

    Science.gov (United States)

    Larras, Floriane; Montuelle, Bernard; Bouchez, Agnès

    2013-10-01

    Benthic diatoms evolved in a biofilm structure, at the interface between water and substrata. Biofilms can adsorb toxicants, such as herbicides, but little is known about the exposure of biofilm organisms, such as benthic diatoms, to these adsorbed herbicides. We assessed the sensitivity of 11 benthic diatoms species to 6 herbicides under both planktonic and benthic conditions using single-species bioassays. The concentration that reduced the growth rate of the population by 10% (EC10) and 50% (EC50), respectively, varied depending on the species, the herbicides, and the growth forms involved. As a general trend, the more hydrophobic the herbicide, the more species were found to be sensitive under benthic growth conditions. Statistical differences (alphadiatoms. For metolachlor, terbutryn and irgarol, benthic thresholds derived from species sensitivity distributions were more protective than planktonic thresholds. For hydrophobic herbicides, deriving sensitivity thresholds from data obtained under benthic growth seems to offer a promising alternative. Copyright © 2013 Elsevier B.V. All rights reserved.

  19. Marine benthic cartography of the Cap de Creus (NE Catalan Coast, Mediterranean Sea

    Directory of Open Access Journals (Sweden)

    Rafael Sardá

    2012-01-01

    Full Text Available The marine benthic cartography of the Cap de Creus and surrounding areas (NW Mediterranean Sea was obtained by combining classical grabbing methods with more recent imaging methods based on a remotely operated vehicle. The goals of this particular survey can be summarized as follows: 1 to chart the benthic communities (and the area of each one; 2 to evaluate the benthic diversity of the areas; 3 to produce visual documentation of the distributions of the benthic organisms; 4 to identify human-induced pressures on the benthic environment; 5 to make recommendations for future management based on the visual assessment; and 6 to set up a new methodology for making large biocenosis maps that would help to manage marine protected and non-protected areas. The marine environment off the Alt Empordà County was shown to have a very rich diversity of benthic habitats. Twenty community categories were identified from videos and grabs. Though benthic habitats mostly located inside a marine protected area were assessed, man-made objects were seen in 10% of the analyzed minutes filmed. The study led to a comprehensive review of the main biotope systems of this coastal area, as well as their environmental condition, and this will be an essential element for their future management.

  20. Carbon fate in a large temperate human-impacted river system: Focus on benthic dynamics

    Science.gov (United States)

    Vilmin, Lauriane; Flipo, Nicolas; Escoffier, Nicolas; Rocher, Vincent; Groleau, Alexis

    2016-07-01

    Fluvial networks play an important role in regional and global carbon (C) budgets. The Seine River, from the Paris urban area to the entrance of its estuary (220 km), is studied here as an example of a large human-impacted river system subject to temperate climatic conditions. We assess organic C (OC) budgets upstream and downstream from one of the world's largest wastewater treatment plants and for different hydrological conditions using a hydrobiogeochemical model. The fine representation of sediment accumulation on the river bed allows for the quantification of pelagic and benthic effects on OC export toward the estuary and on river metabolism (i.e., net CO2 production). OC export is significantly affected by benthic dynamics during the driest periods, when 25% of the inputs to the system is transformed or stored in the sediment layer. Benthic processes also substantially affect river metabolism under any hydrological condition. On average, benthic respiration accounts for one third of the total river respiration along the studied stretch (0.27 out of 0.86 g C m-2 d-1). Even though the importance of benthic processes was already acknowledged by the scientific community for headwater streams, these results stress the major influence of benthic dynamics, and thus of physical processes such as sedimentation and resuspension, on C cycling in downstream river systems. It opens the door to new developments in the quantification of C emissions by global models, whereby biogeochemical processing and benthic dynamics should be taken into account.

  1. Environmental Drivers of Benthic Flux Variation and Ecosystem Functioning in Salish Sea and Northeast Pacific Sediments.

    Directory of Open Access Journals (Sweden)

    Rénald Belley

    Full Text Available The upwelling of deep waters from the oxygen minimum zone in the Northeast Pacific from the continental slope to the shelf and into the Salish Sea during spring and summer offers a unique opportunity to study ecosystem functioning in the form of benthic fluxes along natural gradients. Using the ROV ROPOS we collected sediment cores from 10 sites in May and July 2011, and September 2013 to perform shipboard incubations and flux measurements. Specifically, we measured benthic fluxes of oxygen and nutrients to evaluate potential environmental drivers of benthic flux variation and ecosystem functioning along natural gradients of temperature and bottom water dissolved oxygen concentrations. The range of temperature and dissolved oxygen encountered across our study sites allowed us to apply a suite of multivariate analyses rarely used in flux studies to identify bottom water temperature as the primary environmental driver of benthic flux variation and organic matter remineralization. Redundancy analysis revealed that bottom water characteristics (temperature and dissolved oxygen, quality of organic matter (chl a:phaeo and C:N ratios and sediment characteristics (mean grain size and porosity explained 51.5% of benthic flux variation. Multivariate analyses identified significant spatial and temporal variation in benthic fluxes, demonstrating key differences between the Northeast Pacific and Salish Sea. Moreover, Northeast Pacific slope fluxes were generally lower than shelf fluxes. Spatial and temporal variation in benthic fluxes in the Salish Sea were driven primarily by differences in temperature and quality of organic matter on the seafloor following phytoplankton blooms. These results demonstrate the utility of multivariate approaches in differentiating among potential drivers of seafloor ecosystem functioning, and indicate that current and future predictive models of organic matter remineralization and ecosystem functioning of soft-muddy shelf and

  2. Benthic nitrogen cycling traversing the capitalize peruvian oxygen minimum zone

    Science.gov (United States)

    Bohlen, L.; Dale, A. W.; Sommer, S.; Mosch, T.; Hensen, C.; Noffke, A.; Scholz, F.; Wallmann, K.

    2011-10-01

    Benthic nitrogen (N) cycling was investigated at six stations along a transect traversing the Peruvian oxygen minimum zone (OMZ) at 11°S. An extensive dataset including porewater concentration profiles and in situ benthic fluxes of nitrate (NO 3-), nitrite (NO 2-) and ammonium (NH 4+) was used to constrain a 1-D reaction-transport model designed to simulate and interpret the measured data at each station. Simulated rates of nitrification, denitrification, anammox and dissimilatory nitrate reduction to ammonium (DNRA) by filamentous large sulfur bacteria (e.g. Beggiatoa and Thioploca) were highly variable throughout the OMZ yet clear trends were discernible. On the shelf and upper slope (80-260 m water depth) where extensive areas of bacterial mats were present, DNRA dominated total N turnover (⩽2.9 mmol N m -2 d -1) and accounted for ⩾65% of NO 3- + NO 2- uptake by the sediments from the bottom water. Nonetheless, these sediments did not represent a major sink for dissolved inorganic nitrogen (DIN = NO 3- + NO 2- + NH 4+) since DNRA reduces NO 3- and, potentially NO 2-, to NH 4+. Consequently, the shelf and upper slope sediments were recycling sites for DIN due to relatively low rates of denitrification and high rates of ammonium release from DNRA and ammonification of organic matter. This finding contrasts with the current opinion that sediments underlying OMZs are a strong sink for DIN. Only at greater water depths (300-1000 m) did the sediments become a net sink for DIN. Here, denitrification was the major process (⩽2 mmol N m -2 d -1) and removed 55-73% of NO 3- and NO 2- taken up by the sediments, with DNRA and anammox accounting for the remaining fraction. Anammox was of minor importance on the shelf and upper slope yet contributed up to 62% to total N 2 production at the 1000 m station. The results indicate that the partitioning of oxidized N (NO 3-, NO 2-) into DNRA or denitrification is a key factor determining the role of marine sediments as DIN

  3. Benthic buffers and boosters of ocean acidification on coral reefs

    Directory of Open Access Journals (Sweden)

    K. R. N. Anthony

    2013-07-01

    Full Text Available Ocean acidification is a threat to marine ecosystems globally. In shallow-water systems, however, ocean acidification can be masked by benthic carbon fluxes, depending on community composition, seawater residence time, and the magnitude and balance of net community production (NCP and calcification (NCC. Here, we examine how six benthic groups from a coral reef environment on Heron Reef (Great Barrier Reef, Australia contribute to changes in the seawater aragonite saturation state (Ωa. Results of flume studies using intact reef habitats (1.2 m by 0.4 m, showed a hierarchy of responses across groups, depending on CO2 level, time of day and water flow. At low CO2 (350–450 μatm, macroalgae (Chnoospora implexa, turfs and sand elevated Ωa of the flume water by around 0.10 to 1.20 h−1 – normalised to contributions from 1 m2 of benthos to a 1 m deep water column. The rate of Ωa increase in these groups was doubled under acidification (560–700 μatm and high flow (35 compared to 8 cm s−1. In contrast, branching corals (Acropora aspera increased Ωa by 0.25 h−1 at ambient CO2 (350–450 μatm during the day, but reduced Ωa under acidification and high flow. Nighttime changes in Ωa by corals were highly negative (0.6–0.8 h−1 and exacerbated by acidification. Calcifying macroalgae (Halimeda spp. raised Ωa by day (by around 0.13 h−1, but lowered Ωa by a similar or higher amount at night. Analyses of carbon flux contributions from benthic communities with four different compositions to the reef water carbon chemistry across Heron Reef flat and lagoon indicated that the net lowering of Ωa by coral-dominated areas can to some extent be countered by long water-residence times in neighbouring areas dominated by turfs, macroalgae and carbonate sand.

  4. From Greenland to green lakes: Cultural eutrophication and the loss of benthic pathways in lakes

    DEFF Research Database (Denmark)

    Vadeboncoeur, Y.; Jeppesen, E.; Zanden, M. J. V.

    2003-01-01

    Benthic community responses to lake eutrophication are poorly understood relative to pelagic responses. We compared phytoplankton and periphyton productivity along a eutrophication gradient in Greenland, U.S., and Danish lakes. Phytoplankton productivity increased along the phosphorus gradient...... with TP . 100 mg m23, phytoplankton were responsible for nearly 100% of primary production. Benthic contributions ranged from 5 to 80% depending on morphometry and littoral habitat composition in lakes with intermediate phosphorus concentrations. Thus, eutrophication was characterized by a switch from...... interactions, but eutrophication eroded the benthic primary production pathway....

  5. The physics of broadcast spawning in benthic invertebrates.

    Science.gov (United States)

    Crimaldi, John P; Zimmer, Richard K

    2014-01-01

    Most benthic invertebrates broadcast their gametes into the sea, whereupon successful fertilization relies on the complex interaction between the physics of the surrounding fluid flow and the biological properties and behavior of eggs and sperm. We present a holistic overview of the impact of instantaneous flow processes on fertilization across a range of scales. At large scales, transport and stirring by the flow control the distribution of gametes. Although mean dilution of gametes by turbulence is deleterious to fertilization, a variety of instantaneous flow phenomena can aggregate gametes before dilution occurs. We argue that these instantaneous flow processes are key to fertilization efficiency. At small scales, sperm motility and taxis enhance contact rates between sperm and chemoattractant-releasing eggs. We argue that sperm motility is a biological adaptation that replaces molecular diffusion in conventional mixing processes and enables gametes to bridge the gap that remains after aggregation by the flow.

  6. Benthic foraminifera of the Panamanian Province: distribution and origins.

    Science.gov (United States)

    Crouch, R.W.; Poag, C.W.

    1987-01-01

    Two hundred twenty-nine species of benthic foraminifera have been identified from 96 stations representing 33 localities on the eastern Pacific inner continental shelf, ranging from southern Peru to northern Baja California. Their distributions mark nearshore provincial boundaries that are nearly identical with those previously documented from the distribution of ostracodes and molluscs. Thirteen species are characteristic of the Panamanian Province, one is characteristic of the Chilean-Peruvian Province, and one is characteristic of the newly proposed Sonoran Subprovince. Seventeen species (7%) appear to be endemic to the eastern Pacific. Fifty-eight (25%) of the species recognized are disjunct from population centers in the western Pacific, 134 species (59%) are disjunct from modern assemblages of the Atlanto-Carribean region, and 40 species (17%) are disjunct from both the western Pacific and the Atlanto-Caribbean. The distribution of the remaining 57 species (25%) is poorly documented; we classify them as of unknown origin. -Authors

  7. Molar tooth carbonates and benthic methane fluxes in Proterozoic oceans

    Science.gov (United States)

    Shen, Bing; Dong, Lin; Xiao, Shuhai; Lang, Xianguo; Huang, Kangjun; Peng, Yongbo; Zhou, Chuanming; Ke, Shan; Liu, Pengju

    2016-01-01

    Molar tooth structures are ptygmatically folded and microspar-filled structures common in early- and mid-Proterozoic (~2,500-750 million years ago, Ma) subtidal successions, but extremely rare in rocks tooth structures may have formed within sediments where microbial sulphate reduction and methanogenesis converged. The convergence was driven by the abundant production of methyl sulphides (dimethyl sulphide and methanethiol) in euxinic or H2S-rich seawaters that were widespread in Proterozoic continental margins. In this convergence zone, methyl sulphides served as a non-competitive substrate supporting methane generation and methanethiol inhibited anaerobic oxidation of methane, resulting in the buildup of CH4, formation of degassing cracks in sediments and an increase in the benthic methane flux from sediments. Precipitation of crack-filling microspar was driven by methanogenesis-related alkalinity accumulation. Deep ocean ventilation and oxygenation around 750 Ma brought molar tooth structures to an end.

  8. Diversity, abundance and community structure of benthic macro- and megafauna on the Beaufort shelf and slope.

    Directory of Open Access Journals (Sweden)

    Jessica Nephin

    Full Text Available Diversity and community patterns of macro- and megafauna were compared on the Canadian Beaufort shelf and slope. Faunal sampling collected 247 taxa from 48 stations with box core and trawl gear over the summers of 2009-2011 between 50 and 1,000 m in depth. Of the 80 macrofaunal and 167 megafaunal taxa, 23% were uniques, present at only one station. Rare taxa were found to increase proportional to total taxa richness and differ between the shelf (< 100 m where they tended to be sparse and the slope where they were relatively abundant. The macrofauna principally comprised polychaetes with nephtyid polychaetes dominant on the shelf and maldanid polychaetes (up to 92% in relative abundance/station dominant on the slope. The megafauna principally comprised echinoderms with Ophiocten sp. (up to 90% in relative abundance/station dominant on the shelf and Ophiopleura sp. dominant on the slope. Macro- and megafauna had divergent patterns of abundance, taxa richness (α diversity and β diversity. A greater degree of macrofaunal than megafaunal variation in abundance, richness and β diversity was explained by confounding factors: location (east-west, sampling year and the timing of sampling with respect to sea-ice conditions. Change in megafaunal abundance, richness and β diversity was greatest across the depth gradient, with total abundance and richness elevated on the shelf compared to the slope. We conclude that megafaunal slope taxa were differentiated from shelf taxa, as faunal replacement not nestedness appears to be the main driver of megafaunal β diversity across the depth gradient.

  9. Visual resolution and contrast sensitivity in two benthic sharks.

    Science.gov (United States)

    Ryan, Laura A; Hart, Nathan S; Collin, Shaun P; Hemmi, Jan M

    2016-12-15

    Sharks have long been described as having 'poor' vision. They are cone monochromats and anatomical estimates suggest they have low spatial resolution. However, there are no direct behavioural measurements of spatial resolution or contrast sensitivity. This study estimates contrast sensitivity and spatial resolution of two species of benthic sharks, the Port Jackson shark, Heterodontus portusjacksoni, and the brown-banded bamboo shark, Chiloscyllium punctatum, by recording eye movements in response to optokinetic stimuli. Both species tracked moving low spatial frequency gratings with weak but consistent eye movements. Eye movements ceased at 0.38 cycles per degree, even for high contrasts, suggesting low spatial resolution. However, at lower spatial frequencies, eye movements were elicited by low contrast gratings, 1.3% and 2.9% contrast in H portusjacksoni and C. punctatum, respectively. Contrast sensitivity was higher than in other vertebrates with a similar spatial resolving power, which may reflect an adaptation to the relatively low contrast encountered in aquatic environments. Optokinetic gain was consistently low and neither species stabilised the gratings on their retina. To check whether restraining the animals affected their optokinetic responses, we also analysed eye movements in free-swimming C. punctatum We found no eye movements that could compensate for body rotations, suggesting that vision may pass through phases of stabilisation and blur during swimming. As C. punctatum is a sedentary benthic species, gaze stabilisation during swimming may not be essential. Our results suggest that vision in sharks is not 'poor' as previously suggested, but optimised for contrast detection rather than spatial resolution. © 2016. Published by The Company of Biologists Ltd.

  10. Fish-derived nutrient hotspots shape coral reef benthic communities.

    Science.gov (United States)

    Shantz, Andrew A; Ladd, Mark C; Schrack, Elizabeth; Burkepile, Deron E

    2015-12-01

    Animal-derived nutrients play an important role in structuring nutrient regimes within and between ecosystems. When animals undergo repetitive, aggregating behavior through time, they can create nutrient hotspots where rates of biogeochemical activity are higher than those found in the surrounding environment. In turn, these hotspots can influence ecosystem processes and community structure. We examined the potential for reef fishes from the family Haemulidae (grunts) to create nutrient hotspots and the potential impact of these hotspots on reef communities. To do so, we tracked the schooling locations of diurnally migrating grunts, which shelter at reef sites during the day but forage off reef each night, and measured the impact of these fish schools on benthic communities. We found that grunt schools showed a high degree of site fidelity, repeatedly returning to the same coral heads. These aggregations created nutrient hotspots around coral heads where nitrogen and phosphorus delivery was roughly 10 and 7 times the respective rates of delivery to structurally similar sites that lacked schools of these fishes. In turn, grazing rates of herbivorous fishes at grunt-derived hotspots were approximately 3 times those of sites where grunts were rare. These differences in nutrient delivery and grazing led to distinct benthic communities with higher cover of crustose coralline algae and less total algal abundance at grunt aggregation sites. Importantly, coral growth was roughly 1.5 times greater at grunt hotspots, likely due to the important nutrient subsidy. Our results suggest that schooling reef fish and their nutrient subsidies play an important role in mediating community structure on coral reefs and that overfishing may have important negative consequences on ecosystem functions. As such, management strategies must consider mesopredatory fishes in addition to current protection often offered to herbivores and top-tier predators. Furthermore, our results suggest that

  11. Benthic foraminifera and environmental changes in Long Island Sound

    Science.gov (United States)

    Thomas, E.; Gapotchenko, T.; Varekamp, J.C.; Mecray, E.I.; Buchholtz ten Brink, Marilyn R.

    2000-01-01

    Benthic foraminiferal faunas in Long Island Sound (LIS) in the 1940s and 1960s were of low diversity, and dominated by species of the genus Elphidium, mainly Elphidium excavatum clavatum, with common Buccella frigida and Eggerella advena. The distribution of these species was dominantly correlated with depth, but it was not clear which depth-related environmental variable was most important. Differences between faunas collected in 1996 and 1997, and in the 1940s and 1960s include a strong decrease in relative abundance of Eggerella advena over all LIS, an increase in relative abundance of Ammonia beccarii in western LIS, and a decrease in species diversity. The decreased diversity suggests that environmental stress caused the faunal changes. Oxygen isotope data for E. excavatum clavatum indicate that a change in salinity is not a probable cause. Carbon isotope data suggest that the supply of organic matter to the benthos increased since the early 1960s, with a stronger increase in western LIS where algal blooms have occurred since the early 1970s, possibly as a result of nutrient input by waste water treatment plants. These blooms or the resulting episodes of anoxia/hypoxia may have played a role in the increased relative abundance of A. beccarii. There is no clear explanation for the decreased abundance of E. advena, but changes in the phytoplankton composition (thus food supply) are a possible cause. Benthic foraminiferal faunal and stable isotope data have excellent potential as indicators of physicochemical environmental changes and their effects on the biota in LIS.

  12. Phototoxicity of TiO2 nanoparticles to a freshwater benthic amphipod: Are benthic systems at risk?

    International Nuclear Information System (INIS)

    Li, Shibin; Wallis, Lindsay K.; Ma, Hongbo; Diamond, Stephen A.

    2014-01-01

    This study investigated phototoxicity of TiO 2 nanoparticles (nano-TiO 2 ) to a freshwater benthic amphipod (Hyalella azteca) using 48-h and 96-h bioassays. Thorough monitoring of particle interactions with exposure media (Lake Superior water, LSW) and the surface of organisms was performed using dynamic light scattering, UV/Vis spectroscopy, and Scanning Electron Microscopy. Large agglomeration and sedimentation (> 77%) in LSW was observed after 0.5 h. A simulated solar radiation (SSR)-favored surface attachment of nanoparticles was observed, indicating enhanced phototoxicity with the increased attachment. A 96-h median lethal concentration (LC50) of 29.9 mg/L in H. azteca was calculated, with a daily 4-h UV exposure of 2.2 W/m 2 . Phototoxicity of nano-TiO 2 under SSR had a 21-fold increase as compared to that under ambient laboratory light. This phototoxicity was also dependent on UV dose, with calculated LC50s around 22.9 (95% CI, 20.5–23.3) Wh/m 2 when exposed to 20 mg/L nano-TiO 2 . Also, H. azteca exhibited negative phototaxis in the presence of shelters, indicating that other factors might play a role in environmental systems. Finally, the environmental implications of nano-TiO 2 to benthic organisms were illustrated, emphasizing the importance of various environmental factors in the ultimate phototoxicity. This increased phototoxicity and its complex interactions with various environmental factors suggest further investigations are needed for future risk assessment of photoactive nanomaterials to benthic organisms. - Graphical abstract: Display Omitted - Highlights: •Large aggregation of TiO 2 nanoparticles in Lake Superior water was observed. •Phototoxicity was dependent on the dose of both solar radiation and nanoparticle. •A solar radiation favored surface attachment of nanoparticles was observed. •Hyalella azteca exhibited negative phototaxis in the presence of shelters. •Factors influencing phototoxicity in the real environment were

  13. Multivariate benthic ecosystem functioning in the Arctic – benthic fluxes explained by environmental parameters in the southeastern Beaufort Sea

    Directory of Open Access Journals (Sweden)

    H. Link

    2013-09-01

    Full Text Available The effects of climate change on Arctic marine ecosystems and their biogeochemical cycles are difficult to predict given the complex physical, biological and chemical interactions among the ecosystem components. We studied benthic biogeochemical fluxes in the Arctic and the influence of short-term (seasonal to annual, long-term (annual to decadal and other environmental variability on their spatial distribution to provide a baseline for estimates of the impact of future changes. In summer 2009, we measured fluxes of dissolved oxygen, nitrate, nitrite, ammonia, soluble reactive phosphate and silicic acid at the sediment–water interface at eight sites in the southeastern Beaufort Sea at water depths from 45 to 580 m. The spatial pattern of the measured benthic boundary fluxes was heterogeneous. Multivariate analysis of flux data showed that no single or reduced combination of fluxes could explain the majority of spatial variation, indicating that oxygen flux is not representative of other nutrient sink–source dynamics. We tested the influence of eight environmental parameters on single benthic fluxes. Short-term environmental parameters (sinking flux of particulate organic carbon above the bottom, sediment surface Chl a were most important for explaining oxygen, ammonium and nitrate fluxes. Long-term parameters (porosity, surface manganese and iron concentration, bottom water oxygen concentrations together with δ13Corg signature explained most of the spatial variation in phosphate, nitrate and nitrite fluxes. Variation in pigments at the sediment surface was most important to explain variation in fluxes of silicic acid. In a model including all fluxes synchronously, the overall spatial distribution could be best explained (57% by the combination of sediment Chl a, phaeopigments, δ13Corg, surficial manganese and bottom water oxygen concentration. We conclude that it is necessary to consider long-term environmental variability along with

  14. Shallow-Water Benthic Habitats of Southwest Puerto Rico: GeoEye Image po_0100092_PS

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  15. Shallow-Water Benthic Habitats of Southwest Puerto Rico: GeoEye Image po_0900172_PS

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  16. NOAA Office for Coastal Management Benthic Habitat Data, Willapa Bay, Washington, 1995 (NODC Accession 0089466)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data are benthic study GIS shapefiles (.shp, .shx, .prj) with associated .dbf attribute tables and specific Federal Geographic Data Committee metadata. A...

  17. Shallow-Water Benthic Habitats of Southwest Puerto Rico: Ground Validation Site Locations

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  18. Shallow-Water Benthic Habitats of Southwest Puerto Rico: GeoEye Image po_0072610_PS

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  19. Baseline assessment of the fish and benthic communities of the Flower Garden Banks (NODC Accession 0118358)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The proposed work develop baseline information on fish and benthic communities within the Flower Garden Banks National Marine Sanctuary (FGBNMS). Surveys will employ...

  20. The reciprocity between coiling direction and dimorphic reproduction in benthic foraminifera

    Digital Repository Service at National Institute of Oceanography (India)

    Nigam, R.; Khare, N.

    , an attempt is made to study the relationship between mode of reproduction (sexual/asexual) and coiling direction (dextral / sinistral) in the benthic foraminiferal species Rotalidium annectens (Parker and Jones). Proloculus (initial chamber) size is taken...

  1. Coastal Bend Texas Benthic Habitat - Espiritu Santo Bay (NODC Accession 0070784)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Coastal Services Center purchased services to process existing and new digital multi-spectral imagery and create digital benthic habitat...

  2. Shallow-Water Benthic Habitats of Southwest Puerto Rico: GeoEye Image po_1700252_PS

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  3. Shallow-Water Benthic Habitats of Southwest Puerto Rico: GeoEye Image po_502736_PS

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  4. Shallow-Water Benthic Habitats of Southwest Puerto Rico: GeoEye Image po_483895_PS

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  5. Integrated ecosystem assessment of Vieques, Puerto Rico Benthic Composition Assessment and Monitoring Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This fish and benthic composition database is the result of a multifaceted effort described below.The National Oceanic and Atmospheric Administration's (NOAA)...

  6. Integrated ecosystem assessment of Vieques, Puerto Rico Benthic Composition Assessment and Monitoring Data (NODC Accession 0125235)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This fish and benthic composition database is the result of a multifaceted effort described below. The National Oceanic and Atmospheric Administration's (NOAA)...

  7. Effects of hydraulic shellfish harvesting on benthic communities and sediment chemistry 2009-2013

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The effects of hydraulic shellfish harvesting on the ecology of biological communities and chemistry of benthic sediments were investigated through a series of...

  8. Nearshore Benthic Habitats of Timor-Leste Derived from WorldView-2 Satellite Imagery

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitat classes were derived for nearshore waters (< 20 m depths) around Timor-Leste from DigitalGlobe WorldView-2 satellite imagery, acquired from Jan 26...

  9. Coastal Bend Texas Benthic Habitat Mapping Aransas Bay (NODC Accession 0070784)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Coastal Services Center purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic habitat...

  10. CRED Benthic Habitat Towboard Still Photos from Palmyra in March and April, 2004

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data is in the form of JPEG still photos taken every 15 seconds from a benthic habitat towboard being towed by small boats at Palmyra Atoll between March 26 and...

  11. CRED Benthic Habitat Towboard Still Photos from Jarvis Island in March and April, 2004

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data is in the form of JPEG still photos taken every 15 seconds from a benthic habitat towboard being towed by small boats at Jarvis Island between March 26 and...

  12. NOAA Office for Coastal Management Benthic Habitat Data, coastal Massachusetts, 1994-1996 (NODC Accession 0089463)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data are benthic study GIS shapefiles (.shp, .shx, .prj) with associated .dbf attribute tables and specific Federal Geographic Data Committee metadata. A...

  13. NOAA Office for Coastal Management Benthic Habitat Data, Bogue Sound, North Carolina, 1992 (NODC Accession 0089465)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data are benthic study GIS shapefiles (.shp, .shx, .prj) with associated .dbf attribute tables and specific Federal Geographic Data Committee metadata. A...

  14. Marine Benthic Invertebrates in Mamala Bay, Oahu, Hawaii 1994 (NODC Accession 9900151)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Planktonic larval stages of many benthic marine invertebrates are especially susceptible to environmental stress, such as the presence of pollution. Recruitment of...

  15. Significance of correspondence between river discharge and proloculus size of benthic foraminifera in paleomonsoonal studies

    Digital Repository Service at National Institute of Oceanography (India)

    Nigam, R.; Khare, N.

    Variations in the mean proloculus size (MPS) of the benthic foraminiferal species Rotalidium annectens were studied in a core collected off Karwar (20 m water depth), on the west coast of India. Comparison of downcore variations in the MPS...

  16. St. Croix, USVI Benthic Composition Assessment and Monitoring Data (2002 - Present)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This fish and benthic composition database is the result of a multifaceted effort described below. The intent of this work is five fold: 1) To spatially characterize...

  17. La Parguera, Puerto Rico Benthic Composition Assessment and Monitoring Data (2002 - Present)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This fish and benthic composition database is the result of a multifaceted effort described below. The intent of this work is five fold: 1) To spatially characterize...

  18. St. John, USVI Benthic Composition Assessment and Monitoring Data (2002 - Present)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This fish and benthic composition database is the result of a multifaceted effort described below.The intent of this work is five fold: 1) To spatially characterize...

  19. Baseline assessment of benthic communities of the Flower Garden Banks (2010 - present): 2011

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The proposed work develop baseline information on fish and benthic communities within the Flower Garden Banks National Marine Sanctuary (FGBNMS). Surveys will employ...

  20. Baseline assessment of the benthic communities of the Flower Garden Banks

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The work developed baseline information on fish and benthic communities within the Flower Garden Banks National Marine Sanctuary (FGBNMS). Surveys employed diving,...

  1. Stimulation of microbial nitrogen cycling in aquatic ecosystems by benthic macrofauna: mechanisms and environmental implications

    DEFF Research Database (Denmark)

    Stief, P.

    2013-01-01

    on benthic microbes apparently has small or neutral effects on nitrogen cycling. Animal-microbe symbioses provide abundant and distinct benthic compartments for a multitude of nitrogen-cycle pathways. Recent studies reveal that ecosystem engineering, grazing, and symbioses of benthic macrofauna significantly......-microbe interactions, which potentially affect the trophic status of aquatic ecosystems. This review contrasts three types of animal-microbe interactions in the benthos of aquatic ecosystems: (i) ecosystem engineering, (ii) grazing, and (iii) symbiosis. Their specific contributions to the turnover of fixed nitrogen...... (mainly nitrate and ammonium) and the emission of the greenhouse gas nitrous oxide are evaluated. Published data indicate that ecosystem engineering by sediment-burrowing macrofauna stimulates benthic nitrification and denitrification, which together allows fixed nitrogen removal. However, the release...

  2. Relationship between benthic foraminifera and sediment in the estuarine complex of Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Dalal, S.G.

    Two indices of community association were used to elucidate the relationship between changes in species composition of benthic foraminifera and changes in the grain size composition of the sediment in estuarine complex of Goa. The degree...

  3. Guam Community Coral Reef Monitoring Program, Benthic Training Surveys at Guam in 2012

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Guam community members gathered benthic cover data using a 0.25m2 quadrat with 6 intersecting points at each meter along a 25-meter transect. Members identified...

  4. Ecological periodic tables for nekton and benthic macrofaunal community usage of estuarine habitats Slides

    Science.gov (United States)

    Ecological periodic tables for nekton and benthic macrofaunal community usage of estuarine habitats Steven P. Ferraro, U.S. Environmental Protection Agency, Newport, OR Background/Questions/Methods The chemical periodic table, the Linnaean system of classification, and the Her...

  5. NOAA Office for Coastal Management Benthic Habitat Data, Humboldt Bay, CA, 2009 (NODC Accession 0090251)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data are benthic study GIS shapefiles (.shp, .shx, .prj) with associated .dbf attribute tables and specific Federal Geographic Data Committee metadata. A...

  6. Benthic percent cover derived from image analysis for selected locations in the Pacific Ocean

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The data products described herein are part of the NOAA Coral Reef Conservation Program (CRCP) funded projects aimed at documenting the status and trends for benthic...

  7. Benthic disturbance and monitoring experiment in the Central Indian Ocean Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Sharma, R.; Nath, B.N.

    Environmental impact assessment studies for deep-sea manganese nodule mining have been initiated in the Central indian Ocean Basin since 1995. As a part of the first phase for collecting the benthic baseline data, echosounding, subbottom profiling...

  8. Guam Community Coral Reef Monitoring Program, Benthic Quadrat Surveys at Guam in 2013

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Guam community members gathered benthic cover data using a 0.25m2 quadrat with 6 intersecting points at each meter along a 25-meter transect. Members identified...

  9. CRED Integrated Benthic Habitat Map for Tutuila Island, American Samoa Year 2007

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is an integrated benthic habitat map system which consists of a number of separate map layers including multibeam bathymetry, digital NOAA nautical charts,...

  10. Benthic images collected at coral reef sites in Batangas, Philippines in 2012 and 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Photographs of the seafloor were collected during benthic photo-quadrat surveys conducted by the NOAA Coral Reef Ecosystem Program (CREP) in 2012 and 2015 along...

  11. Kailua Bay, Oahu, Hawaii benthic mapping data for 1999-2001 (NODC Accession 0001239)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic mapping surveys were conducted from March 1999 to January 2001 aperiodically in support of research related to sedimentology, sea level history, and reef...

  12. Kailua Bay, Oahu, Hawaii Benthic Mapping Data 1999-2001 (NODC Accession 0001239)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic mapping surveys were conducted from March 1999 to January 2001 aperiodically in support of research related to sedimentology, sea level history, and reef...

  13. Baseline assessment of fish and benthic communities of the Flower Garden Banks

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The work developed baseline information on fish and benthic communities within the Flower Garden Banks National Marine Sanctuary (FGBNMS). Surveys employed diving,...

  14. Baseline assessment of fish and benthic communities of the Flower Garden Banks (NODC Accession 0118358)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The proposed work develop baseline information on fish and benthic communities within the Flower Garden Banks National Marine Sanctuary (FGBNMS). Surveys will employ...

  15. Shallow-Water Benthic Habitats of Southwest Puerto Rico: Accuracy Assessment Site Locations

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Shallow-water (<30m) benthic habitat maps of the nearshore marine environment of two areas in Southwest Puerto Rico (PR), including the Guanica Bay/La Parguera...

  16. An experimental mesocosm study of microhabitat preferences and mobility in benthic foraminifera: Preliminary results.

    NARCIS (Netherlands)

    Ernst, S.R.; Duijnstee, Ivo; Jannink, N.T.; van der Zwaan, Bert

    2001-01-01

    Three small microcosm experiments were carried out to study the microhabitat preferences and mobility of benthic foraminifera from the northern Adriatic Sea. Following initial homogenization, the foraminiferal assemblages developed a clear microhabitat partitioning in the microcosms within 20 days.

  17. AFSC/RACE/GAP/Yeung: Eastern Bering Sea Essential Fish Habitat Benthic Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic samples were collected between 2009-2012 in the Bering Sea to study Essential Fish Habitat. Station locations were at or near fixed stations of the AFSC...

  18. Microphytobenthos and benthic macroalgae determine sediment organic matter composition in shallow photic sediments

    NARCIS (Netherlands)

    Hardison, A.K.; Canuel, E.A/; Anderson, I.C.; Tobias, C.R.; Veuger, B.; Waters, M.N.

    2013-01-01

    Microphytobenthos and benthic macroalgae play an important role in system metabolism within shallow coastal bays. However, their independent and interactive influences on sediment organic matter (SOM) are not well understood. We investigated the influence of macroalgae and microphytobenthos on SOM

  19. National Coral Reef Monitoring Program: Benthic Images Collected from Climate Stations across American Samoa in 2015

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Photoquadrat benthic images were collected at NCRMP climate stations and permanent sites identified by the Ocean and Climate Change team across American Samoa in...

  20. Benthic fluxes in a tropical estuary and their role in the ecosystem

    Digital Repository Service at National Institute of Oceanography (India)

    Pratihary, A.K.; Naqvi, S.W.A.; Naik, H.; Thorat, B.R.; Narvenkar, G.; Manjunatha, B.R.; Rao, V.P.

    In-situ measurements of benthic fluxes of oxygen and nutrients were made in the subtidal region of the Mandovi estuary during premonsoon and monsoon seasons to understand the role of sediment-water exchange processes in the estuarine ecosystem...

  1. St. John Benthic Habitat Mapping - Moderate Depth Ground Validation Sites (Mean Locations)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitats of the moderate-depth marine environment in and around the Virgin Islands Coral Reef National Monument were mapped using a combination of...

  2. St. John Moderate-Depth Benthic Habitat Map derived from Acoustic Imagery

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitats of the moderate-depth marine environment in and around the Virgin Islands Coral Reef National Monument were mapped using a combination of...

  3. Response of sedimentary nucleic acids to benthic disturbance in the Central Indian Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Fernandes, C.E.G.; DeSouza, M.J.B.D.; Nair, S.; LokaBharathi, P.A.

    ). Further, degradation of RNA has also been thought of as a virtually universal response to starvation in bacteria. The starving Figure 2. Continued. Nucleic Acids Response to Benthic Disturbance in the CIB 293 bacteria use RNA as an endogenous metabolic...

  4. Ecology of benthic production during southwest monsoon in an estuarine complex of Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Parulekar, A.H.; Dwivedi, S.N.

    biomass was mainly contributed by the brown mussel Perna indica It is deduced that the benthic standing crop could possibly sustain a high yield of demersal fish catch than what is being exploited at present...

  5. Fouha Bay Moving Window Analysis, Benthic Quadrat Surveys at Guam in 2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — PIRO Fishery Biologist gathered benthic cover data using a 1m2 quadrat with 25 intersecting points every five meters along a transect running from the inner bay to...

  6. Geographic Information System (GIS) characterizations of benthic habitats near South Florida coast (NODC Accession 0000600)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data collection uses a Geographic Information System (GIS) to organize and characterize information about benthic communities and substrates, which are...

  7. A preliminary study of an eastern Mediterranean coastal ecosystem: Summer Resorts and Benthic ecosystems

    Directory of Open Access Journals (Sweden)

    S. REIZOPOULOU

    2006-06-01

    Full Text Available The present study investigates whether coastal benthic communities are affected by tourist activities along the coast, which persist for a limited time period. The analysis of benthic macrofauna is based on the ecological parameters (quantitative analyses as well as on the ecological identity of the species (qualitative analyses. Microbial contamination and some population statistics are correlated with ecological parameters. The disturbance of benthic communities in the vicinity of summer resorts is summarized by a reduction in species number and dominance of opportunistic species characteristic of disturbed and polluted environments. It is found that community diversity and evenness of distribution decrease with the deterioration of water quality, expressed as grade of microbial contamination, which implies that benthic community is also a significant element in assessing the quality of coastal waters. The above parameters were statistically negatively correlated with the number of tourists.

  8. Benthic images collected at coral reef sites in Timor-Leste from 2012-2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Photographs of the seafloor were collected during benthic photo-quadrat surveys conducted by the NOAA Coral Reef Ecosystem Program (CREP) in hard bottom shallow...

  9. Environmental impact assessment of benthic community stability in an estuarine complex

    Digital Repository Service at National Institute of Oceanography (India)

    Ansari, Z.A.; Abidi, S.A.H.

    . There was also a substantial decrease in clam production during the 10 year time under consideration. The implication of ever increasing mining rejects in the estuarine system and the utilization of quantitative benthic parameters in environmental impact studies...

  10. Benthic metabolism and sulfur cycling along an inundation gradient in a tidal Spartina anglica salt marsh

    NARCIS (Netherlands)

    Gribsholt, B.; Kristensen, E.

    2003-01-01

    Central aspects of carbon and sulfur biogeochemistry were studied along a transect extending from an unvegetated mudflat into a Spartina anglica salt marsh. Conditions along the transect differed with respect to tidal elevation, sediment characteristics, vegetation coverage, and benthic macrofauna

  11. Dominant Benthic Structure and Biological Cover Habitat Maps for West Maui and West Hawaii

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitat maps depict dominant substrate type and biological cover in depths between 0 and ~150 m for two priority sites in the Main Hawaiian Islands; the NOAA...

  12. CRED Integrated Benthic Habitat Map for French Frigate Shoals, Northwestern Hawaiian Islands 2007

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is an integrated benthic habitat map system which consists of a number of separate map layers including multibeam bathymetry, acoustic backscatter imagery,...

  13. The benthic regeneration of N and P in the Great Brak estuary ...

    African Journals Online (AJOL)

    2015-10-05

    -water interface. Aquat. Microbiol. Ecol. 21 187–194. LAWRENCE D, DAGG MJ, LIU H, CUMMINGS, SR, ORTNER PB and KELBLE C (2004) Wind events and benthic-pelagic coupling in a shallow subtropical bay in Florida.

  14. Ecological energetics of benthic communities of an estuarine system of the west coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Ansari, Z.A.; Parulekar, A.H.

    An attempt has been made to measure the biomass and quantify the production rates of different size groups of benthic organisms. The average annual production rates of microphytobenthos, meiobenthos and macrobenthos were estimated to be 42.68, 6...

  15. Subtidal benthic macrofauna of the Mangalore Coast, west coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Gopalakrishnan, T.C.; Nair, K.K.C.

    Subtidal macrobenthic fauna from the Mangalore Coast was studied from the shelf areas between the old Mangalore Port and Suratkal, covering an area of approximately 40 km sup(2). Benthic bivalves were the most abundant group, (36160/m sup(2...

  16. Coastal Bend Texas Benthic Habitat Mapping Corpus Christi Bay (NODC Accession 0070784)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Coastal Services Center purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic habitat...

  17. Coastal Bend Texas Benthic Habitat Mapping Corpus Christi Bay 2004 Biotic

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  18. Coastal Bend Texas Benthic Habitat Mapping Corpus Christi Bay 2004 Geoform

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  19. Coastal Bend Texas Benthic Habitat Mapping Corpus Christi Bay 2004 Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — In 2006 and 2007 the NOAA Office for Coastal Management purchased services to process existing digital multi-spectral imagery (ADS-40) and create digital benthic...

  20. Hydrodynamic and Environmental Controls on the Nitrogen Isotope Effect of Benthic N2 Production

    Science.gov (United States)

    Rooze, J.; Meile, C. D.

    2016-02-01

    Isotopic signatures of nitrogen (N) pools, together with knowledge on fractionation during the conversion between different forms of N, can be used to constrain marine N budgets. However, the reported extent of N isotope fractionation during benthic N2 production has differed substantially between studies, leading to uncertainty in the estimate of the global benthic N2 production rate. To assess the range and identify mechanisms underlying such observations, we developed a reactive transport model and ran simulations evaluating the impact of nitrification, denitrification, and anaerobic ammonium oxidation on the isotopic composition of in-situ N/2 production. Different hydrodynamic regimes were taken into account, including advective flow induced by bioirrigation and purely diffusive transport. The effects of the benthic mineralization rate and the composition of the overlying water were also quantified. The benthic redox conditions were found to control the N isotope effect, which under reducing conditions is driven by fractionation during nitrification and anaerobic ammonium oxidation and under oxidizing conditions by fractionation during denitrification. The mineralization rate, the bioirrigation intensity, and chemical composition of the overlying water affect the benthic redox zonation and therefore also the benthic N isotope effect. With increasing water-depth the mineralization rate and the advective nitrate supply to the sediment both decrease, constraining most benthic N cycling to the continental shelf. Simulations that reproduce observed trends of sediment O2 uptake and N2 fluxes with water depth, combined with ocean bathymetry yield an average benthic N isotope effect of -3‰, in line with independent estimates from global circulation models coupled to N cycle models (Somes et al., 2013. Biogeosciences 10, 5889-5910).

  1. Consequences of increasing hypoxic disturbance on benthic communities and ecosystem functioning.

    Science.gov (United States)

    Villnäs, Anna; Norkko, Joanna; Lukkari, Kaarina; Hewitt, Judi; Norkko, Alf

    2012-01-01

    Disturbance-mediated species loss has prompted research considering how ecosystem functions are changed when biota is impaired. However, there is still limited empirical evidence from natural environments evaluating the direct and indirect (i.e. via biota) effects of disturbance on ecosystem functioning. Oxygen deficiency is a widespread threat to coastal and estuarine communities. While the negative impacts of hypoxia on benthic communities are well known, few studies have assessed in situ how benthic communities subjected to different degrees of hypoxic stress alter their contribution to ecosystem functioning. We studied changes in sediment ecosystem function (i.e. oxygen and nutrient fluxes across the sediment water-interface) by artificially inducing hypoxia of different durations (0, 3, 7 and 48 days) in a subtidal sandy habitat. Benthic chamber incubations were used for measuring responses in sediment oxygen and nutrient fluxes. Changes in benthic species richness, structure and traits were quantified, while stress-induced behavioral changes were documented by observing bivalve reburial rates. The initial change in faunal behavior was followed by non-linear degradation in benthic parameters (abundance, biomass, bioturbation potential), gradually impairing the structural and functional composition of the benthic community. In terms of ecosystem function, the increasing duration of hypoxia altered sediment oxygen consumption and enhanced sediment effluxes of NH(4)(+) and dissolved Si. Although effluxes of PO(4)(3-) were not altered significantly, changes were observed in sediment PO(4)(3-) sorption capability. The duration of hypoxia (i.e. number of days of stress) explained a minor part of the changes in ecosystem function. Instead, the benthic community and disturbance-driven changes within the benthos explained a larger proportion of the variability in sediment oxygen- and nutrient fluxes. Our results emphasize that the level of stress to the benthic habitat

  2. Stimulation of microbial nitrogen cycling in aquatic ecosystems by benthic macrofauna: mechanisms and environmental implications

    OpenAIRE

    P. Stief

    2013-01-01

    Invertebrate animals that live at the bottom of aquatic ecosystems (i.e., benthic macrofauna) are important mediators between nutrients in the water column and microbes in the benthos. The presence of benthic macrofauna stimulates microbial nutrient dynamics through different types of animal–microbe interactions, which potentially affect the trophic status of aquatic ecosystems. This review contrasts three types of animal–microbe interactions in the benthos of aquatic ecosystems: (i) e...

  3. Effects of coral reef benthic primary producers on dissolved organic carbon and microbial activity.

    Directory of Open Access Journals (Sweden)

    Andreas F Haas

    Full Text Available Benthic primary producers in marine ecosystems may significantly alter biogeochemical cycling and microbial processes in their surrounding environment. To examine these interactions, we studied dissolved organic matter release by dominant benthic taxa and subsequent microbial remineralization in the lagoonal reefs of Moorea, French Polynesia. Rates of photosynthesis, respiration, and dissolved organic carbon (DOC release were assessed for several common benthic reef organisms from the backreef habitat. We assessed microbial community response to dissolved exudates of each benthic producer by measuring bacterioplankton growth, respiration, and DOC drawdown in two-day dark dilution culture incubations. Experiments were conducted for six benthic producers: three species of macroalgae (each representing a different algal phylum: Turbinaria ornata--Ochrophyta; Amansia rhodantha--Rhodophyta; Halimeda opuntia--Chlorophyta, a mixed assemblage of turf algae, a species of crustose coralline algae (Hydrolithon reinboldii and a dominant hermatypic coral (Porites lobata. Our results show that all five types of algae, but not the coral, exuded significant amounts of labile DOC into their surrounding environment. In general, primary producers with the highest rates of photosynthesis released the most DOC and yielded the greatest bacterioplankton growth; turf algae produced nearly twice as much DOC per unit surface area than the other benthic producers (14.0±2.8 µmol h⁻¹ dm⁻², stimulating rapid bacterioplankton growth (0.044±0.002 log10 cells h⁻¹ and concomitant oxygen drawdown (0.16±0.05 µmol L⁻¹ h⁻¹ dm⁻². Our results demonstrate that benthic reef algae can release a significant fraction of their photosynthetically-fixed carbon as DOC, these release rates vary by species, and this DOC is available to and consumed by reef associated microbes. These data provide compelling evidence that benthic primary producers differentially influence

  4. Environmental drivers of the benthic macroinvertebrates community in a hypersaline estuary (Northeastern Brazil

    Directory of Open Access Journals (Sweden)

    Carlinda Railly Ferreira Medeiros

    Full Text Available Abstract Introduction The estuarine community of benthic macroinvertebrates spatially varies in response to changes in environmental variables in these ecosystems. Understanding this variability helps our understanding the mechanisms structuring these communities. Aim Assess the structural aspects of the benthic macroinvertebrate community in a hypersaline estuary, and to relate to environmental variables that influence the community structure along the estuary. Methods The study was conducted at Tubarão river estuary in May 2015. We sampled two estuarine areas (upper and lower, and in each zone were sampled six points composed of two replicas, one sampled in sandy bottom and the other in muddy bottom. Samples of benthic macroinvertebrates and estuarine environmental variables were collected. Environmental drivers of the benthic macroinvertebrate community were determined by Distance-based Linear Models analysis. The contribution of individual species to the dissimilarity between the areas and substrate types were determined by analysis of the percentage of similarity. Results The composition of benthic macroinvertebrate community differed between the upper and lower areas, although it was similar between the muddy and sandy bottoms. The variation in the benthic community between areas was mainly related to the influence of salinity in the upper area. In the lower area, the variation of the macroinvertebrates was related to salinity, associated with other variables in the sandy (temperature, turbidity and dissolved oxygen and muddy (temperature, total dissolved solids and dissolved oxygen substrates. Taxa which contributed most to the dissimilarity between the upper and lower areas were Nereididae (17.89%, Anomalocardia brasiliana (15% and Cirratulidae (10.43%. Conclusions Salinity was the main driver of the structural aspects of the benthic macroinvertebrate community in the upper area of the estuary, although in the lower area a set of

  5. Modeling food web interactions in benthic deep-sea ecosystems: a practical guide

    OpenAIRE

    Soetaert, K.

    2009-01-01

    Deep-sea benthic systems are notoriously difficult to sample. Even more than for other benthic systems, many flows among biological groups cannot be directly measured, and data sets remain incomplete and uncertain. In such cases, mathematical models are often used to quantify unmeasured biological interactions. Here, we show how to use so-called linear inverse models (LIMs) to reconstruct material and energy flows through food webs in which the number of measurements is a fraction of the tota...

  6. Spatial Variability of Benthic-Pelagic Coupling in an Estuary Ecosystem: Consequences for Microphytobenthos Resuspension Phenomenon

    Science.gov (United States)

    Ubertini, Martin; Lefebvre, Sébastien; Gangnery, Aline; Grangeré, Karine; Le Gendre, Romain; Orvain, Francis

    2012-01-01

    The high degree of physical factors in intertidal estuarine ecosystem increases material processing between benthic and pelagic compartments. In these ecosystems, microphytobenthos resuspension is a major phenomenon since its contribution to higher trophic levels can be highly significant. Understanding the sediment and associated microphytobenthos resuspension and its fate in the water column is indispensable for measuring the food available to benthic and pelagic food webs. To identify and hierarchize the physical/biological factors potentially involved in MPB resuspension, the entire intertidal area and surrounding water column of an estuarine ecosystem, the Bay des Veys, was sampled during ebb tide. A wide range of physical parameters (hydrodynamic regime, grain size of the sediment, and suspended matter) and biological parameters (flora and fauna assemblages, chlorophyll) were analyzed to characterize benthic-pelagic coupling at the bay scale. Samples were collected in two contrasted periods, spring and late summer, to assess the impact of forcing variables on benthic-pelagic coupling. A mapping approach using kriging interpolation enabled us to overlay benthic and pelagic maps of physical and biological variables, for both hydrological conditions and trophic indicators. Pelagic Chl a concentration was the best predictor explaining the suspension-feeders spatial distribution. Our results also suggest a perennial spatio-temporal structure of both benthic and pelagic compartments in the ecosystem, at least when the system is not imposed to intense wind, with MPB distribution controlled by both grain size and bathymetry. The benthic component appeared to control the pelagic one via resuspension phenomena at the scale of the bay. Co-inertia analysis showed closer benthic-pelagic coupling between the variables in spring. The higher MPB biomass observed in summer suggests a higher contribution to filter-feeders diets, indicating a higher resuspension effect in

  7. Consequences of increasing hypoxic disturbance on benthic communities and ecosystem functioning.

    Directory of Open Access Journals (Sweden)

    Anna Villnäs

    Full Text Available Disturbance-mediated species loss has prompted research considering how ecosystem functions are changed when biota is impaired. However, there is still limited empirical evidence from natural environments evaluating the direct and indirect (i.e. via biota effects of disturbance on ecosystem functioning. Oxygen deficiency is a widespread threat to coastal and estuarine communities. While the negative impacts of hypoxia on benthic communities are well known, few studies have assessed in situ how benthic communities subjected to different degrees of hypoxic stress alter their contribution to ecosystem functioning. We studied changes in sediment ecosystem function (i.e. oxygen and nutrient fluxes across the sediment water-interface by artificially inducing hypoxia of different durations (0, 3, 7 and 48 days in a subtidal sandy habitat. Benthic chamber incubations were used for measuring responses in sediment oxygen and nutrient fluxes. Changes in benthic species richness, structure and traits were quantified, while stress-induced behavioral changes were documented by observing bivalve reburial rates. The initial change in faunal behavior was followed by non-linear degradation in benthic parameters (abundance, biomass, bioturbation potential, gradually impairing the structural and functional composition of the benthic community. In terms of ecosystem function, the increasing duration of hypoxia altered sediment oxygen consumption and enhanced sediment effluxes of NH(4(+ and dissolved Si. Although effluxes of PO(4(3- were not altered significantly, changes were observed in sediment PO(4(3- sorption capability. The duration of hypoxia (i.e. number of days of stress explained a minor part of the changes in ecosystem function. Instead, the benthic community and disturbance-driven changes within the benthos explained a larger proportion of the variability in sediment oxygen- and nutrient fluxes. Our results emphasize that the level of stress to the

  8. Benthic disturbance and impact experiments in the Central Indian Ocean Basin

    Digital Repository Service at National Institute of Oceanography (India)

    Sharma, R.; Nath, B.N.; Valsangkar, A.B.; Parthiban, G.; Sivakholundu, K.M.; Walker, G.A.

    part of the Indian Deep-Sea Environment Experiment (INDEX) to assess the poten-tial environmental impact of nodule mining,it was proposed to simulate a disturbance on the seafloor and to study its effects on the benthic ecosystem. For this purpose a... benthic disturberwas used during cruise 3B of RV Yuzhmorgeologiyaduring August 1997,in a preselected test sitein the Central Indian Ocean. This multidisciplinary study aims to assess the potential effects of such activities. The program is funded...

  9. Relationship between abundance and morphology of benthic foraminifera Epistominella exigua: Palaeoclimatic implications

    Digital Repository Service at National Institute of Oceanography (India)

    Saraswat, R.; Deopujari, A.; Nigam, R.; Henriques, P.J.

    foraminiferal species vary with ambient conditions and are used as paleoclimatic proxy (Thiede, 1971; Prell, 1984; Nigam and Rao, 1987; 1989; Anderson and Prell, 1993; Nigam and Khare, 1999; Peeters et al., 2002; Žarić et al., 2005; Saraswat et al., 2005a...; 2005b). The abundance and morphology of benthic foraminifera is closely associated with the reproduction which depends on the ambient environmental conditions. Therefore, the changes in abundance and morphology of the benthic foraminifera should...

  10. Spatial variability of benthic-pelagic coupling in an estuary ecosystem: consequences for microphytobenthos resuspension phenomenon.

    Directory of Open Access Journals (Sweden)

    Martin Ubertini

    Full Text Available The high degree of physical factors in intertidal estuarine ecosystem increases material processing between benthic and pelagic compartments. In these ecosystems, microphytobenthos resuspension is a major phenomenon since its contribution to higher trophic levels can be highly significant. Understanding the sediment and associated microphytobenthos resuspension and its fate in the water column is indispensable for measuring the food available to benthic and pelagic food webs. To identify and hierarchize the physical/biological factors potentially involved in MPB resuspension, the entire intertidal area and surrounding water column of an estuarine ecosystem, the Bay des Veys, was sampled during ebb tide. A wide range of physical parameters (hydrodynamic regime, grain size of the sediment, and suspended matter and biological parameters (flora and fauna assemblages, chlorophyll were analyzed to characterize benthic-pelagic coupling at the bay scale. Samples were collected in two contrasted periods, spring and late summer, to assess the impact of forcing variables on benthic-pelagic coupling. A mapping approach using kriging interpolation enabled us to overlay benthic and pelagic maps of physical and biological variables, for both hydrological conditions and trophic indicators. Pelagic Chl a concentration was the best predictor explaining the suspension-feeders spatial distribution. Our results also suggest a perennial spatio-temporal structure of both benthic and pelagic compartments in the ecosystem, at least when the system is not imposed to intense wind, with MPB distribution controlled by both grain size and bathymetry. The benthic component appeared to control the pelagic one via resuspension phenomena at the scale of the bay. Co-inertia analysis showed closer benthic-pelagic coupling between the variables in spring. The higher MPB biomass observed in summer suggests a higher contribution to filter-feeders diets, indicating a higher

  11. Quantification of viral and prokaryotic production rates in benthic ecosystems: a methods comparison

    OpenAIRE

    Eugenio Rastelli; Eugenio Rastelli; Antonio Dell'Anno; Cinzia Corinaldesi; Mathias Middelboe; Rachel Todd Noble; Roberto Danovaro; Roberto Danovaro

    2016-01-01

    Viruses profoundly influence benthic marine ecosystems by infecting and subsequently killing their prokaryotic hosts, thereby impacting the cycling of carbon and nutrients. Previously conducted studies, based on different methodologies, have provided widely differing estimates of the relevance of viruses on benthic prokaryotes. There has been no attempt so far to compare these independent approaches, including contextual comparisons among different approaches for sample manipulation (i.e., di...

  12. Quantification of Viral and Prokaryotic Production Rates in Benthic Ecosystems: A Methods Comparison

    OpenAIRE

    Rastelli, Eugenio; Dell’Anno, Antonio; Corinaldesi, Cinzia; Middelboe, Mathias; Noble, Rachel T.; Danovaro, Roberto

    2016-01-01

    Viruses profoundly influence benthic marine ecosystems by infecting and subsequently killing their prokaryotic hosts, thereby impacting the cycling of carbon and nutrients. Previously conducted studies, based on different methodologies, have provided widely differing estimates of the relevance of viruses on benthic prokaryotes. There has been no attempt so far to compare these independent approaches, including contextual comparisons among different approaches for sample manipulation (i.e., di...

  13. Effects of coral reef benthic primary producers on dissolved organic carbon and microbial activity.

    Science.gov (United States)

    Haas, Andreas F; Nelson, Craig E; Wegley Kelly, Linda; Carlson, Craig A; Rohwer, Forest; Leichter, James J; Wyatt, Alex; Smith, Jennifer E

    2011-01-01

    Benthic primary producers in marine ecosystems may significantly alter biogeochemical cycling and microbial processes in their surrounding environment. To examine these interactions, we studied dissolved organic matter release by dominant benthic taxa and subsequent microbial remineralization in the lagoonal reefs of Moorea, French Polynesia. Rates of photosynthesis, respiration, and dissolved organic carbon (DOC) release were assessed for several common benthic reef organisms from the backreef habitat. We assessed microbial community response to dissolved exudates of each benthic producer by measuring bacterioplankton growth, respiration, and DOC drawdown in two-day dark dilution culture incubations. Experiments were conducted for six benthic producers: three species of macroalgae (each representing a different algal phylum: Turbinaria ornata--Ochrophyta; Amansia rhodantha--Rhodophyta; Halimeda opuntia--Chlorophyta), a mixed assemblage of turf algae, a species of crustose coralline algae (Hydrolithon reinboldii) and a dominant hermatypic coral (Porites lobata). Our results show that all five types of algae, but not the coral, exuded significant amounts of labile DOC into their surrounding environment. In general, primary producers with the highest rates of photosynthesis released the most DOC and yielded the greatest bacterioplankton growth; turf algae produced nearly twice as much DOC per unit surface area than the other benthic producers (14.0±2.8 µmol h⁻¹ dm⁻²), stimulating rapid bacterioplankton growth (0.044±0.002 log10 cells h⁻¹) and concomitant oxygen drawdown (0.16±0.05 µmol L⁻¹ h⁻¹ dm⁻²). Our results demonstrate that benthic reef algae can release a significant fraction of their photosynthetically-fixed carbon as DOC, these release rates vary by species, and this DOC is available to and consumed by reef associated microbes. These data provide compelling evidence that benthic primary producers differentially influence reef microbial

  14. Assessing the suitability of benthic foraminiferal morpho-groups to reconstruct paleomonsoon from Bay of Bengal

    Digital Repository Service at National Institute of Oceanography (India)

    Manasa, M.; Saraswat, R.; Nigam, R.

    ). Therefore, it is necessary to further test the relationship between riverine influx and relative abundance of benthic foraminiferal morpho-groups. The heavy freshwa- ter influx along with huge sediment load from the Ganga–Brahmaputra–Mahanadi river system... and their ecolog- ical preferences from continental shelf region off Ganga–Brahmaputra–Mahanadi region. Therefore, here, we document recent benthic foraminiferal distribution from the shelf region, off the Ganga– Brahmaputra–Mahanadi river system, one...

  15. Metal contamination in benthic macroinvertebrates in a sub-basin in the southeast of Brazil.

    Science.gov (United States)

    Chiba, W A C; Passerini, M D; Tundisi, J G

    2011-05-01

    Benthic macroinvertebrates have many useful properties that make possible the use of these organisms as sentinel in biomonitoring programmes in freshwater. Combined with the characteristics of the water and sediment, benthic macroinvertebrates are potential indicators of environmental quality. Thus, the spatial occurrence of potentially toxic metals (Al, Zn, Cr, Co, Cu, Fe, Mn and Ni) in the water, sediment and benthic macroinvertebrates samples were investigated in a sub-basin in the southeast of Brazil in the city of São Carlos, São Paulo state, with the aim of verifying the metals and environment interaction with benthic communities regarding bioaccumulation. Hypothetically, there can be contamination by metals in the aquatic environment in the city due to lack of industrial effluent treatment. All samples were analysed by the USEPA adapted method and processed in an atomic absorption spectrophotometer. The sub-basin studied is contaminated by toxic metals in superficial water, sediment and benthic macroinvertebrates. The Bioaccumulation Factor showed a tendency for metal bioaccumulation by the benthic organisms for almost all the metal species. The results show a potential human and ecosystem health risk, contributing to metal contamination studies in aquatic environments in urban areas.

  16. Metal contamination in benthic macroinvertebrates in a sub-basin in the southeast of Brazil

    Directory of Open Access Journals (Sweden)

    WAC Chiba

    Full Text Available Benthic macroinvertebrates have many useful properties that make possible the use of these organisms as sentinel in biomonitoring programmes in freshwater. Combined with the characteristics of the water and sediment, benthic macroinvertebrates are potential indicators of environmental quality. Thus, the spatial occurrence of potentially toxic metals (Al, Zn, Cr, Co, Cu, Fe, Mn and Ni in the water, sediment and benthic macroinvertebrates samples were investigated in a sub-basin in the southeast of Brazil in the city of São Carlos, São Paulo state, with the aim of verifying the metals and environment interaction with benthic communities regarding bioaccumulation. Hypothetically, there can be contamination by metals in the aquatic environment in the city due to lack of industrial effluent treatment. All samples were analysed by the USEPA adapted method and processed in an atomic absorption spectrophotometer. The sub-basin studied is contaminated by toxic metals in superficial water, sediment and benthic macroinvertebrates. The Bioaccumulation Factor showed a tendency for metal bioaccumulation by the benthic organisms for almost all the metal species. The results show a potential human and ecosystem health risk, contributing to metal contamination studies in aquatic environments in urban areas.

  17. Multi-scale processes drive benthic community structure in upwelling-affected coral reefs

    Directory of Open Access Journals (Sweden)

    Corvin eEidens

    2015-02-01

    Full Text Available Environmental processes acting at multiple spatial scales control benthic community structures in coral reefs. However, the contribution of local factors (e.g., substrate availability and water clarity vs. non-local oceanographic processes (e.g. upwelling events in these highly complex systems is poorly understood. We therefore investigated the relative contribution of local and non-local environmental factors on the structure of benthic groups and specifically on coral assemblages in the upwelling-affected Tayrona National Natural Park (TNNP, Colombian Caribbean. Coral-dominated communities were monitored along with key environmental parameters at water current-exposed and -sheltered sites in four consecutive bays. Regression tree analyses revealed that environmental parameters explained 59.1% of the variation within the major benthic groups and 36.1% within coral assemblages. Findings also showed recurring patterns in community structures at sites with similar exposure across bays. We suggest that benthic community composition in TNNP is primarily driven by 1 wave exposure, followed by 2 temporal changes in nutrient availability governing the structure of benthic groups, and 3 local bay-specific differences controlling the zonation of benthic groups and coral assemblages. This study highlights the existence of complex hierarchical levels of local and non-local environmental factors acting on reef communities and stresses the importance of considering processes operating at multiple spatial scales in future studies on coral reef community structure and resilience.

  18. Biogeographical distribution of the benthic thecate hydroids collected during the Spanish Antartida 8611 expedition and comparison between Antarctic and Magellan benthic hydroid faunas

    Directory of Open Access Journals (Sweden)

    A. L. Peña Cantero

    1999-12-01

    Full Text Available The biogeographical distribution of the benthic hydroid species collected during the Spanish Antarctic expedition Antártida 8611 has been studied. An inventory of the Antarctic and Magellan benthic thecate hydroid faunas, along with a comparison between the two, have been also carried out. 104 and 126 species of thecate hydroids have been considered in the Antarctic and Magellan areas, respectively. 72 species (69% of the Antarctic species and 49 (39% of the Magellan species are endemic. 23 species are present both in the Antarctic Region and in the Magellan area, representing 22% and 18% respectively, and indicating an important relationship between both faunas.

  19. Benthic Foraminifera in the Changing Ecosystem of Long Island Sound

    Science.gov (United States)

    Thaler, B.; Thomas, E.; Varekamp, J. C.

    2004-05-01

    Long Island Sound (LIS) is an estuary in a heavily urbanized region; Long Island lies to its South, New York City (NYC) to its West and Connecticut to its North. The Connecticut River contributes >70% of the fresh water influx. LIS has a narrow opening to the West (into East River), but exchange with the ocean occurs dominantly at its eastern end, resulting in an east-west gradient in salinity. An east-west gradient is also present in indicators of anthropogenic contamination in the surface sediments (e.g., trace metals) because western LIS is close to the major source of anthropogenic input (NYC). In addition, bottom currents focus fine-grained, contaminant-loaded sediments there. Since the early 1970's western LIS and parts of central LIS have suffered summer hypoxia, probably as a result of increased algal growth caused by anthropogenic nitrogen input. Benthic foraminifera are eukaryote heterotrophic organisms with a calcareous or agglutinated test. We investigated changes in their populations over time in about 2m-long gravity cores in westernmost (WLIS75GGC1; 73o 40'W, 40o 52'N, 19m waterdepth) and coastal central LIS (B1GGC1; 73o 4'W, 41o 10'N, 8m water depth), to document environmental changes over the last millennium, including the time of European settlement and the industrial revolution and population increase. An age model was derived from metal pollution records and 14C dating. Before European settlement, the low-diversity benthic faunas in core B1GGC1, at a depth within the zone of light penetration, were dominated by Elphidium excavatum, a species feeding on living diatoms. In western LIS (below the zone of light penetration) this species was less abundant and Elphidium incertum and Buccella frigida were common. In both cores, the absolute abundance of benthic foraminifera and the relative abundance of Elphidium excavatum increased in the early 1800's, coinciding with a time of rapid increase in human population around LIS and slightly before an

  20. Benthic assemblages of mega epifauna on the Oregon continental margin

    Science.gov (United States)

    Hemery, Lenaïg G.; Henkel, Sarah K.; Cochrane, Guy R.

    2018-01-01

    Environmental assessment studies are usually required by a country's administration before issuing permits for any industrial activities. One of the goals of such environmental assessment studies is to highlight species assemblages and habitat composition that could make the targeted area unique. A section of the Oregon continental slope that had not been previously explored was targeted for the deployment of floating wind turbines. We carried out an underwater video survey, using a towed camera sled, to describe its benthic assemblages. Organisms were identified to the lowest taxonomic level possible and assemblages described related to the nature of the seafloor and the depth. We highlighted six invertebrate assemblages and three fish assemblages. For the invertebrates within flat soft sediments areas we defined three different assemblages based on primarily depth: a broad mid-depth (98–315 m) assemblage dominated by red octopus, sea pens and pink shrimps; a narrower mid-depth (250–270 m) assemblage dominated by box crabs and various other invertebrates; and a deeper (310–600 m) assemblage dominated by sea urchins, sea anemones, various snails and zoroasterid sea stars. The invertebrates on mixed sediments also were divided into three different assemblages: a shallow (~100 m deep) assemblage dominated by plumose sea anemones, broad mid-depth (170–370 m) assemblage dominated by sea cucumbers and various other invertebrates; and, again, a narrower mid-depth (230–270 m) assemblage, dominated by crinoids and encrusting invertebrates. For the fish, we identified a rockfish assemblage on coarse mixed sediments at 170–370 m and another fish assemblage on smaller mixed sediments within that depth range (250–370 m) dominated by thornyheads, poachers and flatfishes; and we identified a wide depth-range (98–600 m) fish assemblage on flat soft sediments dominated by flatfishes, eelpouts and thornyheads. Three of these assemblages (the two