WorldWideScience

Sample records for bay california usa

  1. Microplastic contamination in the San Francisco Bay, California, USA.

    Science.gov (United States)

    Sutton, Rebecca; Mason, Sherri A; Stanek, Shavonne K; Willis-Norton, Ellen; Wren, Ian F; Box, Carolynn

    2016-08-15

    Despite widespread detection of microplastic pollution in marine environments, data describing microplastic abundance in urban estuaries and microplastic discharge via treated municipal wastewater are limited. This study presents information on abundance, distribution, and composition of microplastic at nine sites in San Francisco Bay, California, USA. Also presented are characterizations of microplastic in final effluent from eight wastewater treatment plants, employing varying treatment technologies, that discharge to the Bay. With an average microplastic abundance of 700,000particles/km(2), Bay surface water appears to have higher microplastic levels than other urban waterbodies sampled in North America. Moreover, treated wastewater from facilities that discharge into the Bay contains considerable microplastic contamination. Facilities employing tertiary filtration did not show lower levels of contamination than those using secondary treatment. As textile-derived fibers were more abundant in wastewater, higher levels of fragments in surface water suggest additional pathways of microplastic pollution, such as stormwater runoff. PMID:27289280

  2. A regional mass balance of methylmercury in San Francisco Bay, California, USA.

    Science.gov (United States)

    Yee, Donald; McKee, Lester J; Oram, John J

    2011-01-01

    The San Francisco Bay (California, USA) is a water body listed as impaired because of Hg contamination in sport fish for human consumption, as well as possible effects on resident wildlife. A legacy of Hg mining in local watersheds and Hg used in Au mining in the Sierra Nevada (USA) has contributed to contamination seen in the bay, with additional more recent and ongoing inputs from various sources. Methylmercury is the species of Hg most directly responsible for contamination in biota, so better understanding of its sources, loads, and processes was sought to identify the best means to reduce impacts. A regional scale model of San Francisco Bay was developed to characterize major methylmercury inputs and processes. The model was used to evaluate the potential impact of uncertainties in estimates for methylmercury loading pathways and environmental processes, identify major data gaps, and explore management prospects for reducing methylmercury contamination. External loading pathways considered in the mass balance include methylmercury loads entering via atmospheric deposition to the bay surface, and discharges from the Sacramento/San Joaquin Delta, local watersheds, municipal wastewater, and fringing wetlands. Internal processes considered include exchange between bed and suspended sediments and the water column, in situ production and demethylation, biological uptake, and losses via hydrologic transport to the ocean through the Golden Gate. In situ sediment methylation and demethylation were dominant sources and losses determining ambient steady-state concentrations in the model, with changes in external loads and export causing smaller changes. Better information on methylation and demethylation is thus most critical to improving understanding of methylmercury balances and management. PMID:20872899

  3. Selenium bioaccumulation and body condition in shorebirds and terns breeding in San Francisco Bay, California, USA.

    Science.gov (United States)

    Ackerman, Joshua T; Eagles-Smith, Collin A

    2009-10-01

    The present study evaluated Se bioaccumulation in four waterbird species (n=206 birds) that breed within San Francisco Bay, California, U.S.A.: American avocets (Recurvirostra americana), black-necked stilts (Himantopus mexicanus), Forster's terns (Sterna forsteri), and Caspian terns (Hydroprogne caspia). Selenium concentrations were variable and influenced by several factors, including species, region, reproductive stage, age, and sex. Adult Se concentrations (microg/g dry wt) in livers ranged from 3.07 to 48.70 in avocets (geometric mean +/- standard error, 7.92 +/- 0.64), 2.28 to 41.10 in stilts (5.29 +/- 0.38), 3.73 to 14.50 in Forster's terns (7.13 _ 0.38), and 4.77 to 14.40 in Caspian terns (6.73 +/- 0.78). Avocets had higher Se concentrations in the North Bay compared to the South Bay, whereas stilt Se concentrations were similar between these regions and Forster's terns had lower Se concentrations in the North Bay compared to the South Bay. Female avocets had higher Se concentrations than male avocets, but this was not the case for stilts and Forster's terns. Of the factors assessed, reproductive stage had the most consistent effect among species. Prebreeding birds tended to have higher liver Se concentrations than breeding birds, but this trend was statistically significant only for Forster's terns. Forster's tern chicks had lower Se concentrations than Forster's tern adults, whereas avocet and stilt adults and chicks were similar. Additionally, body condition was negatively related to liver Se concentrations in Forster's tern adults but not in avocet, stilt, or Caspian tern adults and chicks. These variable results illustrate the complexity of Se bioaccumulation and highlight the need to sample multiple species and examine several factors to assess the impact of Se on wildlife. PMID:19459720

  4. Bed composition generation for morphodynamic modeling: Case study of San Pablo Bay in California, USA

    Science.gov (United States)

    van der Wegen, M.; Dastgheib, A.; Jaffe, B.E.; Roelvink, D.

    2011-01-01

    Applications of process-based morphodynamic models are often constrained by limited availability of data on bed composition, which may have a considerable impact on the modeled morphodynamic development. One may even distinguish a period of "morphodynamic spin-up" in which the model generates the bed level according to some ill-defined initial bed composition rather than describing the realistic behavior of the system. The present paper proposes a methodology to generate bed composition of multiple sand and/or mud fractions that can act as the initial condition for the process-based numerical model Delft3D. The bed composition generation (BCG) run does not include bed level changes, but does permit the redistribution of multiple sediment fractions over the modeled domain. The model applies the concept of an active layer that may differ in sediment composition above an underlayer with fixed composition. In the case of a BCG run, the bed level is kept constant, whereas the bed composition can change. The approach is applied to San Pablo Bay in California, USA. Model results show that the BCG run reallocates sand and mud fractions over the model domain. Initially, a major sediment reallocation takes place, but development rates decrease in the longer term. Runs that take the outcome of a BCG run as a starting point lead to more gradual morphodynamic development. Sensitivity analysis shows the impact of variations in the morphological factor, the active layer thickness, and wind waves. An important but difficult to characterize criterion for a successful application of a BCG run is that it should not lead to a bed composition that fixes the bed so that it dominates the "natural" morphodynamic development of the system. Future research will focus on a decadal morphodynamic hindcast and comparison with measured bathymetries in San Pablo Bay so that the proposed methodology can be tested and optimized. ?? 2010 The Author(s).

  5. Mercury correlations among six tissues for four waterbird species breeding in San Francisco Bay, California, USA.

    Science.gov (United States)

    Eagles-Smith, Collin A; Ackerman, Joshua T; Adelsbach, Terrence L; Takekawa, John Y; Miles, A Keith; Keister, Robin A

    2008-10-01

    Despite a large body of research concerning mercury (Hg) in birds, no single tissue has been used consistently to assess Hg exposure, and this has hampered comparisons across studies. We evaluated the relationships of Hg concentrations among tissues in four species of waterbirds (American avocets [Recurvirostra americana], black-necked stilts [Himantopus mexicanus], Caspian terns [Hydroprogne caspia; formerly Sterna caspia], and Forster's terns [Sterna forsteri]) and across three life stages (prebreeding adults, breeding adults, and chicks) in San Francisco Bay, California, USA. Across species and life stages, Hg concentrations (least square mean +/- standard error) were highest in head feathers (6.45 +/- 0.31 microg/g dry wt) and breast feathers (5.76 +/- 0.28 microg/g dry wt), followed by kidney (4.54 +/- 0.22 microg/g dry wt), liver (4.43 +/- 0.21 microg/g dry wt), blood (3.10 +/- 0.15 microg/g dry wt), and muscle (1.67 +/- 0.08 microg/g dry wt). Relative Hg distribution among tissues, however, differed by species and life stage. Mercury concentrations were highly correlated among internal tissues (r2 > or = 0.89). Conversely, the relationships between Hg in feathers and internal tissues were substantially weaker (r2 < or = 0.42). Regression slopes sometimes differed among species and life stages, indicating that care must be used when predicting Hg concentrations in one tissue based on those in another. However, we found good agreement between predictions made using a general tissue-prediction equation and more specific equations developed for each species and life stage. Finally, our results suggest that blood is an excellent, nonlethal predictor of Hg concentrations in internal tissues but that feathers are relatively poor indicators of Hg concentrations in internal tissues. PMID:18444697

  6. Helium systematics of cold seep fluids at Monterey Bay, California, USA: Temporal variations and mantle contributions

    Science.gov (United States)

    Füri, E.; Hilton, D. R.; Brown, K. M.; Tryon, M. D.

    2009-08-01

    We report helium isotope ratios (3He/4He) as well as helium and neon abundance results for submarine cold seep fluids from Extrovert Cliff in Monterey Bay, California. Samples were collected in copper tubing attached to submarine flux meters operating in continuous pumping mode. Following instrumentation recovery, the tubing was sectioned to produce for the first time a high-resolution time series of dissolved He and Ne variations over a time span of several days. Noble gas concentrations are variable and appear affected by interaction with a hydrocarbon phase within the aquifer. However, it is still possible to resolve the He signal into components associated with air equilibration, excess air entrainment, and terrigenic fluxes (both crustal and mantle-derived). The mantle He contribution reaches ˜25-30% in some samples (up to 2.3 RA, where RA = air 3He/4He). Our quasi-continuous He-Ne record shows remarkable fluctuations over time scales of only a few hours and reflects the combined effects of gas stripping by hydrocarbons and an episodic input of mantle-derived fluids.

  7. Storm surges and climate change implications for tidal marshes: Insight from the San Francisco Bay Estuary, California, USA

    Science.gov (United States)

    Thorne, Karen M.; Buffington, Kevin J.; Swanson, Kathleen; Takekawa, John Y.

    2013-01-01

    Tidal marshes are dynamic ecosystems that are influenced by oceanic and freshwater processes and daily changes in sea level. Projected sea-level rise and changes in storm frequency and intensity will affect tidal marshes by altering suspended sediment supply, plant and wildlife communities, and the inundation duration and depth of the marsh platform. The objective of this research was to evaluate how regional weather conditions resulting in low-pressure storms changed tidal conditions locally within three tidal marshes. We hypothesized that regional storms will increase sea level heights locally, resulting in increased inundation of the tidal marsh platform and plant communities. Using site-level measurements of elevation, plant communities, and water levels, we present results from two storm events in 2010 and 2011 from the San Francisco Bay Estuary (SFBE), California, USA. The January 2010 storm had the lowest recorded sea level pressure in the last 30 years for this region. During the storm episodes, the duration of tidal marsh inundation was 1.8 and 3.1 times greater than average for that time of year in 2010 and 2011, respectively. At peak storm surges, over 65% in 2010 and 93% in 2011 of the plant community was under water. We also discuss the implications of these types of storms and projected sea-level rise on the structure and function of tidal marshes and how that may affect the hydrogeomorphic processes and marsh biotic communities. This type of information is useful to managers for incorporating local climate change into developing their monitoring, management, and adaptation strategies.

  8. An evaluation of the success of dredging as remediation at a DDT-contaminated site in San Francisco Bay, California, USA.

    Science.gov (United States)

    Weston, Donald P; Jarman, Walter M; Cabana, Gilbert; Bacon, Corinne E; Jacobson, Lisa A

    2002-10-01

    Lauritzen Canal, a portion of San Francisco Bay near Richmond, California, USA, was heavily contaminated with dichlorodiphenyltrichloroethane (DDT) and dieldrin as a result of releases from a pesticide-formulating firm. In 1996 and 1997, 82,000 m3 of contaminated sediment was removed from the canal by dredging. This study evaluated the success of the dredging based largely on body burdens of DDT and its metabolites (sigmaDDT) in resident biota, with some data on sediment- and water-contaminant levels and sediment toxicity testing. Sediment disturbance during dredging introduced a pulse of sigmaDDT into the Lauritzen Canal ecosystem, and body burdens of fish and invertebrates increased 2- to 76-fold, depending on the species. Approximately 1 1/2 years after remediation, 11 of 14 indicators showed contamination comparable with or worse than the contamination that existed prior to dredging. Monitoring of mussels up to four years postdredging suggests some modest improvement, although the sigmaDDT body burden of canal mussels remained far above the norm for San Francisco Bay. The elevated sigmaDDT body burdens in biota that persisted for years after remediation reflect recent exposure and are not merely a result of slow metabolic elimination of the sigmaDDT pulse associated with dredging. Sediment sigmaDDT concentrations were low immediately after dredging, but within months, the canal bottom became covered with a veneer of fine sediment as contaminated as that that had been removed. The source of this material has not been conclusively established, but we suspect it came from slumping and erosion from the flanks of the canal beneath docks and around pilings where dredging was not done. In retrospect, either capping in place or more thorough dredging may have been more successful in reducing pesticide exposure of the biota, although there were difficulties associated with both alternatives. PMID:12371501

  9. Mercury burdens in Chinese mitten crabs (Eriocheir sinensis) in three tributaries of southern San Francisco Bay, California, USA

    International Nuclear Information System (INIS)

    Chinese mitten crabs (Eriocheir sinensis), endemic to Asia, were first reported in the San Francisco Bay in 1992. They are now established in nearly all San Francisco Bay tributaries. These crabs accumulate more metals, such as mercury, than crustaceans living in the water column. Because their predators include fish, birds, mammals and humans, their mercury burdens have an exceptional potential to impact the ecosystem and public health. We sought to elucidate the potential threat of mitten crab mercury burdens in three adjacent streams in southern San Francisco Bay, one of which is known to be contaminated with mercury. Mitten crabs had hepatopancreas concentrations of total mercury and methylmercury that did not differ among streams. The maximum burden we measured was below the action level of 1 ppm recommended by the USEPA. Hepatopancreas concentrations of methylmercury declined with increasing crab size, suggesting a mechanism for mercury excretion and that predators might reduce mercury exposure if they select larger crabs. Because mercury may be heterogeneously distributed among tissues, estimation of the impacts of crab mercury burdens on the environment requires more data on the feeding preferences of predators. - Hepatopancreas concentrations of mercury decline with crab size, which may have important consequences for bio-magnification in food webs

  10. Changes in production and respiration during a spring phytoplankton bloom in San Francisco Bay, California, USA: Implications for net ecosystem metabolism

    Science.gov (United States)

    Caffrey, J.M.; Cloern, J.E.; Grenz, C.

    1998-01-01

    We present results of an intensive sampling program designed to measure weekly changes in ecosystem respiration (oxygen consumption in the water column and sediments) around the 1996 spring bloom in South San Francisco Bay, California, USA. Measurements were made at a shallow site (2 m, where mean photic depth was 60% of the water column height) and a deep site (15 m, mean photic depth was only 20% of the water column). We also estimated phytoplankton primary production weekly at both sites to develop estimates of net oxygen flux as the sum of pelagic production (PP), pelagic respiration (PR) and benthic respiration (BR). Over the 14 wk period from February 5 to May 14, PP ranged from 2 to 210, PR from 9 to 289, and BR from 0.1 to 48 mmol O2 m-2 d-1, illustrating large variability of estuarine oxygen fluxes at the weekly time scale. Pelagic production exceeded total respiration at the shallow site, but not at the deep site, demonstrating that the shallow domains are net autotrophic but the deep domains are net heterotrophic, even during the period of the spring bloom. If we take into account the potential primary production by benthic microalgae, the estuary as a whole is net autotrophic during spring, net heterotrophic during the nonbloom seasons, and has a balanced net metabolism over a full annual period. The seasonal shift from net autotrophy to heterotrophy during the transition from spring to summer was accompanied by a large shift from dominance by pelagic respiration to dominance by benthic respiration. This suggests that changes in net ecosystem metabolism can reflect changes in the pathways of energy flow in shallow coastal ecosystems.

  11. Humboldt Bay, California Benthic Habitats 2009 Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Humboldt Bay is the largest estuary in California north of San Francisco Bay and represents a significant resource for the north coast region. Beginning in 2007 the...

  12. Bathymetry--Offshore Half Moon Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the bathymetry and shaded-relief maps of the Offshore Half Moon Bay, California (raster data file is included in...

  13. Habitat--Drakes Bay and Vicinity, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the habitat map of the seafloor of the Drakes Bay and Vicinity map area, California. The vector data file is included in...

  14. Short-term variability of 7Be atmospheric deposition and watershed response in a Pacific coastal stream, Monterey Bay, California, USA

    International Nuclear Information System (INIS)

    Beryllium-7 is a powerful and commonly used tracer for environmental processes such as watershed sediment provenance, soil erosion, fluvial and nearshore sediment cycling, and atmospheric fallout. However, few studies have quantified temporal or spatial variability of 7Be accumulation from atmospheric fallout, and parameters that would better define the uses and limitations of this geochemical tracer. We investigated the abundance and variability of 7Be in atmospheric deposition in both rain events and dry periods, and in stream surface-water samples collected over a ten-month interval at sites near northern Monterey Bay (37°N, 122°W) on the central California coast, a region characterized by a rainy winters, dry summers, and small mountainous streams with flashy hydrology. The range of 7Be activity in rainwater samples from the main sampling site was 1.3–4.4 Bq L−1, with a mean (±standard deviation) of 2.2 ± 0.9 Bq L−1, and a volume-weighted average of 2.0 Bq L−1. The range of wet atmospheric deposition was 18–188 Bq m−2 per rain event, with a mean of 72 ± 53 Bq m−2. Dry deposition fluxes of 7Be ranged from less than 0.01 up to 0.45 Bq m−2 d−1, with an estimated dry season deposition of 7 Bq m−2 month−1. Annualized 7Be atmospheric deposition was approximately 1900 Bq m−2 yr−1, with most deposition via rainwater (>95%) and little via dry deposition. Overall, these activities and deposition fluxes are similar to values found in other coastal locations with comparable latitude and Mediterranean-type climate. Particulate 7Be values in the surface water of the San Lorenzo River in Santa Cruz, California, ranged from −1 to 0.6 Bq g−1, with a median activity of 0.26 Bq g−1. A large storm event in January 2010 characterized by prolonged flooding resulted in the entrainment of 7Be-depleted sediment, presumably from substantial erosion in the watershed. There were too few particulate 7Be data over the storm to accurately model a 7Be load

  15. California sea lions (Zalophus californianus californianus) have lower chlorinated hydrocarbon contents in northern Baja California, Mexico, than in California, USA

    Energy Technology Data Exchange (ETDEWEB)

    Del Toro, Ligeia [Universidad Autonoma de Baja California (UABC), Facultad de Ciencias Marinas, Ensenada, Baja California (Mexico); Investigacion y Conservacion de Mamiferos Marinos de Ensenada, A.C., Placido Mata 2309 Depto. D-5, Condominio Las Fincas, Ensenada, Baja California 22810 (Mexico); Heckel, Gisela [Investigacion y Conservacion de Mamiferos Marinos de Ensenada, A.C., Placido Mata 2309 Depto. D-5, Condominio Las Fincas, Ensenada, Baja California 22810 (Mexico) and Centro de Investigacion Cientifica y de Educacion Superior de Ensenada, B.C. Km 107 Carretera Tijuana-Ensenada, Ensenada, Baja California 22860 (Mexico)]. E-mail: gheckel@cicese.mx; Camacho-Ibar, Victor F. [Instituto de Investigaciones Oceanologicas, UABC, Apdo. Postal 453, Ensenada, Baja California 22860 (Mexico); Schramm, Yolanda [Universidad Autonoma de Baja California (UABC), Facultad de Ciencias Marinas, Ensenada, Baja California (Mexico); Investigacion y Conservacion de Mamiferos Marinos de Ensenada, A.C., Placido Mata 2309 Depto. D-5, Condominio Las Fincas, Ensenada, Baja California 22810 (Mexico)

    2006-07-15

    Chlorinated hydrocarbons (CHs) were determined in blubber samples of 18 California sea lions (Zalophus californianus californianus) that stranded dead along Todos Santos Bay, Ensenada, Baja California, Mexico, January 2000-November 2001. {sigma}DDTs were the dominant group (geometric mean 3.8 {mu}g/g lipid weight), followed by polychlorinated biphenyls ({sigma}PCBs, 2.96 {mu}g/g), chlordanes (0.12 {mu}g/g) and hexachlorocyclohexanes (0.06 {mu}g/g). The {sigma}DDTs/{sigma}PCBs ratio was 1.3. We found CH levels more than one order of magnitude lower than those reported for California sea lion samples collected along the California coast, USA, during the same period as our study. This sharp north-south gradient suggests that Z. californianus stranded in Ensenada (most of them males) would probably have foraged during the summer near rookeries 500-1000 km south of Ensenada and the rest of the year migrate northwards, foraging along the Baja California peninsula, including Ensenada, and probably farther north. - Results suggest that sea lion prey must also have lower hydrocarbons in Baja California than in California in the USA.

  16. California sea lions (Zalophus californianus californianus) have lower chlorinated hydrocarbon contents in northern Baja California, Mexico, than in California, USA

    International Nuclear Information System (INIS)

    Chlorinated hydrocarbons (CHs) were determined in blubber samples of 18 California sea lions (Zalophus californianus californianus) that stranded dead along Todos Santos Bay, Ensenada, Baja California, Mexico, January 2000-November 2001. ΣDDTs were the dominant group (geometric mean 3.8 μg/g lipid weight), followed by polychlorinated biphenyls (ΣPCBs, 2.96 μg/g), chlordanes (0.12 μg/g) and hexachlorocyclohexanes (0.06 μg/g). The ΣDDTs/ΣPCBs ratio was 1.3. We found CH levels more than one order of magnitude lower than those reported for California sea lion samples collected along the California coast, USA, during the same period as our study. This sharp north-south gradient suggests that Z. californianus stranded in Ensenada (most of them males) would probably have foraged during the summer near rookeries 500-1000 km south of Ensenada and the rest of the year migrate northwards, foraging along the Baja California peninsula, including Ensenada, and probably farther north. - Results suggest that sea lion prey must also have lower hydrocarbons in Baja California than in California in the USA

  17. San Francisco and Bay Area, CA, USA

    Science.gov (United States)

    1991-01-01

    Although clouds obscure part of the city of San Francisco and the mouth of the Bay (37.5N, 122.0W), many cultural and natural features in the immediate vicinity are obvious. The Bay Bridge which was damaged in the 1989 earthquake, Candlestick Park, San Mateo and Dumbarton Bridges as well as the various colored settling ponds rimming the south end of the Bay, the San Andreas and Calaveras faults and many of the major highways can be seen.

  18. Backscatter B [7125]--Offshore Half Moon Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the acoustic-backscatter map of the Offshore of Half Moon Bay map area, California. Backscatter data are provided as two...

  19. Folds--Offshore of Half Moon Bay Map Area, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for folds for the geologic and geomorphic map of the Offshore of Half Moon Bay map area, California. The vector data file is...

  20. Faults--Offshore of Half Moon Bay Map Area, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for faults for the geologic and geomorphic map of the Offshore of Half Moon Bay map area, California. The vector data file is...

  1. Transgressive Contours--Pigeon Point to South Monterey Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the transgressive contours for the Pigeon Point to South Monterey Bay, California, region. The vector file is included in...

  2. Transgressive Contours--Salt Point to Drakes Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the transgressive contours for the Salt Point to Drakes Bay, California, region. The vector file is included in...

  3. Sediment Thickness--Pigeon Point to South Monterey Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the sediment-thickness map of the Pigeon Point to South Monterey Bay, California, region. The raster data file is included in...

  4. Isopachs--Pigeon Point to South Monterey Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the isopachs for the Pigeon Point to South Monterey Bay, California, region. The vector data file is included in...

  5. Depth to Transition--Salt Point to Drakes Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the depth-to-transition map of the Salt Point to Drakes Bay, California, region. The raster data file is included in...

  6. Habitat--Offshore of Half Moon Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the habitat map of the seafloor of the Offshore of Half Moon Bay map area, California. The polygon shapefile is included in...

  7. San Francisco Bay, California 1 arc-second DEM

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The 1-second San Francisco Bay, California Elevation Grid provides bathymetric data in ASCII raster format of 1-second resolution in geographic coordinates. This...

  8. Faults--Drakes Bay and Vicinity Map Area, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data of faults for the geologic and geomorphologic map of the Drakes Bay and Vicinity map area, California. The vector data file is...

  9. Folds--Drakes Bay and Vicinity Map Area, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data of folds for the geologic and geomorphologic map of the Drakes Bay and Vicinity map area, California. The vector data file is...

  10. Backscatter B [Swath]--Drakes Bay and Vicinity, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the acoustic-backscatter map of Drakes bay and Vicinity map area, California. Backscatter data are provided as separate grids...

  11. Backscatter A [8101]--Offshore Half Moon Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the acoustic-backscatter map of the Offshore of Half Moon Bay map area, California. Backscatter data are provided as two...

  12. Isopachs--Salt Point to Drakes Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the sediment-thickness map of the Salt Point to Drakes Bay, California, region. The raster data file is included in...

  13. Seafloor character--Offshore of Half Moon Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents the seafloor-character map of the Offshore of Half Moon Bay map area, California. The raster data file is included in...

  14. Radar image San Francisco Bay Area, California

    Science.gov (United States)

    2000-01-01

    The San Francisco Bay Area in California and its surroundings are shown in this radar image from the Shuttle Radar Topography Mission (SRTM). On this image, smooth areas, such as the bay, lakes, roads and airport runways appear dark, while areas with buildings and trees appear bright. Downtown San Francisco is at the center and the city of Oakland is at the right across the San Francisco Bay. Some city areas, such as the South of Market district in San Francisco, appear bright due to the alignment of streets and buildings with respect to the incoming radar beam. Three of the bridges spanning the Bay are seen in this image. The Bay Bridge is in the center and extends from the city of San Francisco to Yerba Buena and Treasure Islands, and from there to Oakland. The Golden Gate Bridge is to the left and extends from San Francisco to Sausalito. The Richmond-San Rafael Bridge is in the upper right and extends from San Rafael to Richmond. Angel Island is the large island east of the Golden Gate Bridge, and lies north of the much smaller Alcatraz Island. The Alameda Naval Air Station is seen just below the Bay Bridge at the center of the image. Two major faults bounding the San Francisco-Oakland urban areas are visible on this image. The San Andreas fault, on the San Francisco peninsula, is seen on the left side of the image. The fault trace is the straight feature filled with linear reservoirs, which appear dark. The Hayward fault is the straight feature on the right side of the image between the urban areas and the hillier terrain to the east.This radar image was acquired by just one of SRTM's two antennas and, consequently, does not show topographic data, but only the strength of the radar signal reflected from the ground. This signal, known as radar backscatter, provides insight into the nature of the surface, including its roughness, vegetation cover and urbanization. The overall faint striping pattern in the images is a data processing artifact due to the

  15. Concentration and bioavailability of metals in San Diego Bay, California

    OpenAIRE

    Deheyn, Dimitri D.; Latz, Michael I

    2005-01-01

    The goal of this study is to describe the variation of metal concentrations in the environment of San Diego Bay, California, and assess the biological availability of metals throughout the Bay considering the local environmental characteristics. The concentrations of 15 metals were measured from sediment (top layer) and seawater particulates collected during an 8 week period from June 14 to August 9, 2001 at four sites in San Diego Bay, located near navigation buoys R8 (site A), R16A (site B)...

  16. Geology and geomorphology--Drakes Bay and Vicinity Bay Map Area, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the geologic and geomorphic map of the Drakes Bay and Vicinity map area, California. The polygon shapefile is included in...

  17. Wastewater effluent dispersal in Southern California Bays

    KAUST Repository

    Uchiyama, Yusuke

    2014-03-01

    The dispersal and dilution of urban wastewater effluents from offshore, subsurface outfalls is simulated with a comprehensive circulation model with downscaling in nested grid configurations for San Pedro and Santa Monica Bays in Southern California during Fall of 2006. The circulation is comprised of mean persistent currents, mesoscale and submesoscale eddies, and tides. Effluent volume inflow rates at Huntington Beach and Hyperion are specified, and both their present outfall locations and alternative nearshore diversion sites are assessed. The effluent tracer concentration fields are highly intermittent mainly due to eddy currents, and their probability distribution functions have long tails of high concentration. The dilution rate is controlled by submesoscale stirring and straining in tracer filaments. The dominant dispersal pattern is alongshore in both directions, approximately along isobaths, over distances of more than 10. km before dilution takes over. The current outfall locations mostly keep the effluent below the surface and away from the shore, as intended, but the nearshore diversions do not. © 2014 Elsevier Ltd.

  18. Cape Cod, Buzzard's Bay, Massachusetts, USA

    Science.gov (United States)

    1990-01-01

    Cape Cod, Massachusetts, USA (42.0N, 70.0W) is a national seashore recreation area with many fine resorts and summer estate homes. Geologically, the cape is a deposit of earth and stone called a terminal moraine, left by the great Pleistocene glaciers of about 20,000 years ago. The through canal at the base of the cape is a manmade feature for waterborne traffic and is part of the Intercoastal Canal network. The cape actually begins south of the canal.

  19. Coccidioidomycosis among Prison Inmates, California, USA, 2011

    Centers for Disease Control (CDC) Podcasts

    2015-02-26

    Dr. Charlotte Wheeler discusses Coccidioidomycosis among Prison Inmates in California.  Created: 2/26/2015 by National Center for Emerging and Zoonotic Infectious Diseases (NCEZID).   Date Released: 2/26/2015.

  20. Knemidocoptic Mange in Wild Golden Eagles, California, USA

    Science.gov (United States)

    Stephenson, Nicole; Rogers, Krysta; Hawkins, Michelle G.; Sadar, Miranda; Guzman, David Sanchez-Migallon; Bell, Douglas A.; Smallwood, Kenneth S.; Wells, Amy; Shipman, Jessica; Foley, Janet

    2014-01-01

    During 2012–2013 in California, USA, 3 wild golden eagles were found with severe skin disease; 2 died. The cause was a rare mite, most closely related to Knemidocoptes derooi mites. Cautionary monitoring of eagle populations, habitats, and diseases is warranted. PMID:25271842

  1. Knemidocoptic Mange in Wild Golden Eagles, California, USA

    Centers for Disease Control (CDC) Podcasts

    2014-09-21

    Dr. Mike Miller reads an abridged version of the article, Knemidocoptic Mange in Wild Golden Eagles, California, USA .  Created: 9/21/2014 by National Center for Emerging and Zoonotic Infectious Diseases (NCEZID).   Date Released: 10/15/2014.

  2. Burkholderia pseudomallei isolates in 2 pet iguanas, California, USA.

    Science.gov (United States)

    Zehnder, Ashley M; Hawkins, Michelle G; Koski, Marilyn A; Lifland, Barry; Byrne, Barbara A; Swanson, Alexandra A; Rood, Michael P; Gee, Jay E; Elrod, Mindy Glass; Beesley, Cari A; Blaney, David D; Ventura, Jean; Hoffmaster, Alex R; Beeler, Emily S

    2014-02-01

    Burkholderia pseudomallei, the causative agent of melioidosis, was isolated from abscesses of 2 pet green iguanas in California, USA. The international trade in iguanas may contribute to importation of this pathogen into countries where it is not endemic and put persons exposed to these animals at risk for infection. PMID:24447394

  3. USA: California rejects mandatory GMO labelling

    OpenAIRE

    Paull, John

    2012-01-01

    Buying organic remains the best strategy for US consumers to avoid eating GM food. The voters of California have rejected the proposal to label GMO food. The proposition was narrowly lost, 47% to 53% (4,326,770 ‘Yes’ votes vs. 4,884,961 ‘No’ votes). Proposition 47 was supported by the organic sector but opposed by a coalition of GMO companies and US multinational food companies. Californians were invited to vote into law ‘The California Right to Know Genetically Engineered Food Act’. Section ...

  4. Impact of the California sea lion (Zalophus californianus) on salmon fisheries in Monterey Bay, California

    OpenAIRE

    Weise, Michael J; Harvey, James T.

    2005-01-01

    To assess the impact of California sea lions (Zalophus californianus) on salmon fisheries in the Monterey Bay region of California, the percentages of hooked fish taken by sea lions in commercial and recreational salmon fisheries were estimated from 1997 to 1999. Onboard surveys of sea lion interactions with the commercial and recreational f isheries and dockside interviews with fishermen after their return to port were conducted in the ports of Santa Cruz, Moss Landing, and Monterey. Appr...

  5. Marine protected area networks in California, USA.

    Science.gov (United States)

    Botsford, Louis W; White, J Wilson; Carr, Mark H; Caselle, Jennifer E

    2014-01-01

    California responded to concerns about overfishing in the 1990s by implementing a network of marine protected areas (MPAs) through two science-based decision-making processes. The first process focused on the Channel Islands, and the second addressed California's entire coastline, pursuant to the state's Marine Life Protection Act (MLPA). We review the interaction between science and policy in both processes, and lessons learned. For the Channel Islands, scientists controversially recommended setting aside 30-50% of coastline to protect marine ecosystems. For the MLPA, MPAs were intended to be ecologically connected in a network, so design guidelines included minimum size and maximum spacing of MPAs (based roughly on fish movement rates), an approach that also implicitly specified a minimum fraction of the coastline to be protected. As MPA science developed during the California processes, spatial population models were constructed to quantify how MPAs were affected by adult fish movement and larval dispersal, i.e., how population persistence within MPA networks depended on fishing outside the MPAs, and how fishery yields could either increase or decrease with MPA implementation, depending on fishery management. These newer quantitative methods added to, but did not supplant, the initial rule-of-thumb guidelines. In the future, similar spatial population models will allow more comprehensive evaluation of the integrated effects of MPAs and conventional fisheries management. By 2011, California had implemented 132 MPAs covering more than 15% of its coastline, and now stands on the threshold of the most challenging step in this effort: monitoring and adaptive management to ensure ecosystem sustainability. PMID:25358301

  6. Wind energy development in California, USA

    Science.gov (United States)

    Wilshire, H.; Prose, D.

    1987-01-01

    Windfarms have been developed rapidly in California in the last few years. The impetus has been a legislated goal to generate 10% of California's electricity by windpower by the year 2000, and generous state and federal tax incentives. Windpower is promoted as environmentally benign, which it is in traditional uses. The California program, however, is not traditional: it calls for centralized development of a magnitude sufficient to offset significant amounts of fossil fuels now used to generate electricity. Centralized windfarm development, as exemplified by the Altamont Pass, Tehachapi Mountains, and San Gorgonio Pass developments, involves major road building projects in erosion-sensitive terrain, effective closure of public lands, and other detrimental effects. A windfarm consisting of 200 turbines with 17-m rotors located in steep terrain 16 km from an existing corridor might occupy 235 ha and physically disturb 86 ha. With average annual wind speeds of 22.5 km/h, the farm would generate about 10??106 kWh/year at present levels of capacity. This annual production would offset 1% of one day's consumption of oil in California. To supply 10% of the state's electricity (at 1984 production rates) would require about 600,000 turbines of the type in common use today and would occupy more than 685,000 ha. It is likely that indirect effects would be felt in much larger areas and would include increased air and water pollution resulting from accelerated erosion, degradation of habitat of domestic and wild animals, damage to archaeological sites, and reduction of scenic quality of now-remote areas of the state. ?? 1987 Springer-Verlag New York Inc.

  7. Quantitative Models for the Narragansett Bay Estuary, Rhode Island/Massachusetts, USA

    Science.gov (United States)

    Multiple drivers, including nutrient loading and climate change, affect the Narragansett Bay ecosystem in Rhode Island/Massachusetts, USA. Managers are interested in understanding the timing and magnitude of these effects, and ecosystem responses to restoration actions. To provid...

  8. A Creek to Bay Biological Assessment in Oakland, California

    Science.gov (United States)

    Ahumada, E.; Ramirez, N.; Lopez, A.; Avila, M.; Ramirez, J.; Arroyo, D.; Bracho, H.; Casanova, A.; Pierson, E.

    2011-12-01

    In 2007, the Surface Water Ambient Monitoring Program (SWAMP) assessed the impact of trash on water quality in the Peralta Creek which is located in the Fruitvale district of Oakland, CA. This 2011 follow-up study will take further steps in evaluating the physical and biological impacts of pollution and human development on Peralta Creek and in the San Leandro Bay, where the Creek empties into the larger San Francisco Bay estuary. This study will utilize two forms of biological assessment in order to determine the level of water quality and ecosystem health of Peralta Creek and San Leandro Bay in Oakland, California. A Rapid Bioassesment Protocal (RBP) will be used as the method of biological assessment for Peralta Creek. RBP uses a biotic index of benthic macroinvertebrates to provide a measure of a water body's health. Larval trematodes found in two mud snails (Ilynassa obsoleta and Cerithidea californica) will be used to evaluate the health of the San Leandro Bay. Due to the complex life cycle of trematodes, the measure of trematode diversity and richness in host species serves as an indicator of estuarine health (Huspeni 2005). We have completed the assessment of one section of Peralta Creek, located at 2465 34th Avenue, Oakland, CA 94601. Abundance results indicate a moderately healthy creek because there were high levels of pollution tolerant benthic macroinvertebrates. The tolerant group of benthic macroinvertebrates includes such organisms as flatworms, leeches, and scuds. This is possibly due to this section of the creek being pumped up to the surface from culverts impacting the macroinvertebrate's life cycle. Another contributing factor to creek health is the amount of organic debris found in the creek, which inhibits the flow and oxygenation of the water, allowing for more pollution tolerant aquatic insects to persist. Further investigation is being conducted to fully assess the Peralta Creek watershed; from the preliminary results one can surmise that

  9. California State Waters Map Series: offshore of Half Moon Bay, California

    Science.gov (United States)

    Cochrane, Guy R.; Dartnell, Peter; Greene, H. Gary; Johnson, Samuel Y.; Golden, Nadine E.; Hartwell, Stephen R.; Dieter, Bryan E.; Manson, Michael W.; Sliter, Ray W.; Ross, Stephanie L.; Watt, Janet T.; Endris, Charles A.; Kvitek, Rikk G.; Phillips, Eleyne L.; Erdey, Mercedes D.; Chin, John L.; Bretz, Carrie K.

    2014-01-01

    In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California’s State Waters. The CSMP approach is to create highly detailed seafloor maps through collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the surficial seafloor geology and shallow (to about 100 m) subsurface geology. The Offshore of Half Moon Bay map area is located in northern California, on the Pacific coast of the San Francisco Peninsula about 40 kilometers south of the Golden Gate. The city of Half Moon Bay, which is situated on the east side of the Half Moon Bay embayment, is the nearest significant onshore cultural center in the map area, with a population of about 11,000. The Pillar Point Harbor at the north edge of Half Moon Bay offers a protected landing for boats and provides other marine infrastructure. The map area lies offshore of the Santa Cruz Mountains, part of the northwest-trending Coast Ranges that run roughly parallel to the San Andreas Fault Zone. The Santa Cruz Mountains lie between the San Andreas Fault Zone and the San Gregorio Fault system. The flat coastal area, which is the most recent of numerous marine terraces, was formed by wave erosion about 105 thousand years ago. The higher elevation of this same terrace west of the Half Moon Bay Airport is caused by uplift on the Seal Cove Fault, a splay of the San Gregorio Fault Zone. Although originally incised into the rising terrain horizontally, the ancient terrace surface has been gently folded into a northwest-plunging syncline by

  10. BENTHIC MACROFAUNA-HABITAT ASSOCIATIONS IN WILLAPA BAY, WASHINGTON, USA

    Science.gov (United States)

    Estuary-wide benthic macrofauna-habitat associations in Willapa Bay, Washington, United States, were determined for 4 habitats (eelgrass [Zostera marina], Atlantic cordgrass [Spartina alterniflora], mud shrimp [Upogebia pugettensis], ghost shrimp [Neotrypaea californiensis]) in 1...

  11. Factors affecting reproductive success of the California clapper rail (Rallus longirostris obsoletus) in San Francisco Bay

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — We assessed the reproductive success of the California clapper rail (Rallus longirostris obsoletus), an endangered species restricted to San Francisco Bay, and the...

  12. Geology and geomorphology--Offshore of Half Moon Bay Map Area, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the geologic and geomorphic map of the Offshore of Half Moon Bay map area, California. The vector data file is included in...

  13. 77 FR 73392 - Revisions to the California State Implementation Plan, Monterey Bay Unified Air Pollution Control...

    Science.gov (United States)

    2012-12-10

    ... AGENCY 40 CFR Part 52 Revisions to the California State Implementation Plan, Monterey Bay Unified Air Pollution Control District AGENCY: Environmental Protection Agency (EPA). ACTION: Proposed rule. SUMMARY: EPA is proposing to approve revisions to the Monterey Bay Unified Air Pollution Control...

  14. Some comments on reconstructing the historical climate of California, USA

    International Nuclear Information System (INIS)

    This paper describes some examples of historical climate reconstruction pertaining to California, USA, focusing mostly on winter climate given the expected strongest teleconnection signals for this season. Climatic data consist of early instrumental data from the US Army Surgeon General at military forts, observers of the Smithsonian Institution, the Signal Service, and some private observers. Documentary (non-instrumental) data were also used in assessing extreme events. Original daily records of these data were carefully assessed for discontinuities from examining diurnal temperature ranges and daily precipitation amounts. The climatic reconstructions conducted were as follows: 1) winter precipitation time series for selected locations since 1850, particularly for Sacramento and San Francisco, 2) winter temperature time series for selected locations since 1850, and 3) analyses of an extreme flooding event in January 1862 and a landfalling tropical cyclone of September 1939. Results indicate distinctive wetter winters for central and northern California in the late nineteenth century, and some of these wetter years correspond to well-known very strong El Ni no events. Connections to weaker El Nino and La Nina events, however, are not clearly evident. The flood of January 1862 is considered unprecedented when compared to other floods of the last 130 years. The reconstruction of a landfalling tropical cyclone for September 1939 near Los Angeles suggests its intensity at just below hurricane strength

  15. Food habits of California Sea Lions (Zalophus californianus) and their impact on Salmonid Fisheries in Monterey Bay, California

    OpenAIRE

    Weise, Michael, J.; Harvey, James

    1999-01-01

    In the ocean commercial troll and recreational salmon fishery in Monterey Bay California, California sea lions (Zalophus califomianus) will swim near or follow fishing boats and will depredate fish once hooked. The objectives of the study were to determine the percentage of salmon taken by pinnipeds in commercial and recreational fisheries, identify relative importance of prey items seasonally consumed by sea lions, and determine the proportion of salmonids in the sea lion diet on a seasonal ...

  16. Assessment of sediment contamination in Casco Bay, Maine, USA

    International Nuclear Information System (INIS)

    The current status of contaminant concentrations in Casco Bay, decadal trends of these contaminants and changes in their geographical distribution are assessed using sediment samples collected approximately 10 years apart. In general, regulated contaminants appeared to be decreasing in concentration. Total PAH and dioxins/furans concentrations did not significantly change over this period. Total organochlorine pesticides, 4,4-DDE, 4,4-DDD, total DDT, PCB, tributyltin and total butyltin decreased in concentration. Trace element concentrations in sediments decreased at the majority of the sampling sites for chromium, nickel, and selenium while arsenic, cadmium, copper, lead, mercury, silver, and zinc remained relatively constant. None of the contaminants measured has increased by more than a factor of 2. Selected sites located in the Inner Bay, where concentrations are higher and new inputs were more likely, showed increased concentrations of contaminants. Most contaminants were not found at concentrations expected to adversely affect sediment biota based on ERL/ERM guidelines. - Sediment studies indicate decadal decreases for many chemical contaminants in Casco Bay

  17. Benthic macrofauna data for San Francisco Bay, California, September 1986

    Science.gov (United States)

    Schemel, Laurence E.; Thompson, J.K.; Harmon, J.G.; Yost, B.T.

    1995-01-01

    Benthic macrofauna were collected during September 1986 to evaluate locations for long-term monitoring stations as part of the U.S. Geological Survey Regional Effects Monitoring Program in San Francisco Bay, California. Three to ten replicate samples were collected with a modified Van Veen sampler (0.05 m2 area) at ten locations. One box core sample (0.06 m2 area) was collected at seven to the ten locations. Six of the box core samples were split into an upper 10 cm sample and a deeper sample before analysis. Macrofauna specimens were identified to the lowest possible taxon, usually genus and species, then counted. An average of 88 percent of the benthic macrofauna specimens were identified to the species level. The fraction identified varied among stations from 54 to 98 percent. Nematodes and oligochaetes accounted for most of the unidentified specimens. Relative to the total number of species identified in five replicates at each location, an average of 90 percent of the species were collected with three replicates. In general, species with high to moderate abundances were present in all replicates, and species collected only after three or more replicates averaged less than one specimen per replicate. Results from the box cores showed that the dominant species were most abundant in the upper 10 cm, the depth of sediment that can be adequately sampled with a modified Van Veen sampler. On the basis of the number of species and their abundances at each location, seven of the ten locations were selected for sampling in the regular program, which began in March 1987.

  18. Residential Mobility and Breast Cancer in Marin County, California, USA

    Directory of Open Access Journals (Sweden)

    Geoffrey M. Jacquez

    2013-12-01

    Full Text Available Marin County (California, USA has among the highest incidences of breast cancer in the U.S. A previously conducted case-control study found eight significant risk factors in participants enrolled from 1997–1999. These included being premenopausal, never using birth control pills, lower highest lifetime body mass index, having four or more mammograms from 1990–1994, beginning drinking alcohol after age 21, drinking an average two or more alcoholic drinks per day, being in the highest quartile of pack-years of cigarette smoking, and being raised in an organized religion. Previously conducted surveys provided residential histories; while  statistic accounted for participants’ residential mobility, and assessed clustering of breast cancer cases relative to controls based on the known risk factors. These identified specific cases, places, and times of excess breast cancer risk. Analysis found significant global clustering of cases localized to specific residential histories and times. Much of the observed clustering occurred among participants who immigrated to Marin County. However, persistent case-clustering of greater than fifteen years duration was also detected. Significant case-clustering among long-term residents may indicate geographically localized risk factors not accounted for in the study design, as well as uncertainty and incompleteness in the acquired addresses. Other plausible explanations include environmental risk factors and cases tending to settle in specific areas. A biologically plausible exposure or risk factor has yet to be identified.

  19. California State Waters Map Series--Drakes Bay Web Services

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of...

  20. Shifts in Cyanobacterial Strain Dominance during the Onset of Harmful Algal Blooms in Florida Bay, USA.

    Science.gov (United States)

    Berry, Dianna L; Goleski, Jennifer A; Koch, Florian; Wall, Charles C; Peterson, Bradley J; Anderson, O Roger; Gobler, Christopher J

    2015-08-01

    Cyanobacteria are fundamental components of aquatic phytoplankton communities and some taxa can cause harmful blooms in coastal ecosystems. Harmful cyanobacterial blooms are typically comprised of multiple strains of a single genus or species that cannot be resolved microscopically. Florida Bay, USA, has experienced harmful cyanobacterial blooms that have been associated with the loss of eelgrass, spiny lobsters, and general food web disruption for more than two decades. To identify the strain or strains of cyanobacteria forming blooms in Florida Bay, samples were collected across the system over an annual cycle and analyzed via DNA sequencing using cyanobacterial-specific 16S rRNA gene primers, flow cytometry, and scanning electron microscopy. Analyses demonstrated that the onset of blooms in Florida Bay was coincident with a transformation of the cyanobacterial populations. When blooms were absent, the cyanobacterial population in Florida Bay was dominated by phycoerythrin-containing Synechococcus cells that were most similar to strains within Clade III. As blooms developed, the cyanobacterial community transitioned to dominance by phycocyanin-containing Synechococcus cells that were coated with mucilage, chain-forming, and genetically most similar to the coastal strains within Clade VIII. Clade VIII strains of Synechococcus are known to grow rapidly, utilize organic nutrients, and resist top-down control by protozoan grazers and viruses, all characteristics consistent with observations of cyanobacterial blooms in Florida Bay. Further, the strains of Synechococcus blooming in this system are genetically distinct from the species previously thought to cause blooms in Florida Bay, Synechococcus elongatus. Collectively, this study identified the causative organism of harmful cyanobacterial blooms in Florida Bay, demonstrates the dynamic nature of cyanobacterial stains within genera in an estuary, and affirms factors promoting Synechococcus blooms. PMID:25661475

  1. Islands at bay: Rising seas, eroding islands, and waterbird habitat loss in Chesapeake Bay (USA)

    Science.gov (United States)

    Erwin, R.M.; Brinker, D.F.; Watts, B.D.; Costanzo, G.R.; Morton, D.D.

    2011-01-01

    Like many resources in the Chesapeake Bay region of the U. S., many waterbird nesting populations have suffered over the past three to four decades. In this study, historic information for the entire Bay and recent results from the Tangier Sound region were evaluated to illustrate patterns of island erosion and habitat loss for 19 breeding species of waterbirds. Aerial imagery and field data collected in the nesting season were the primary sources of data. From 1993/1994 to 2007/2008, a group of 15 islands in Tangier Sound, Virginia were reduced by 21% in area, as most of their small dunes and associated vegetation and forest cover were lost to increased washovers. Concurrently, nesting American black ducks (Anas rubripes) declined by 66%, wading birds (herons-egrets) by 51%, gulls by 72%, common terns (Sterna hirundo) by 96% and black skimmers (Rynchops niger) by about 70% in this complex. The declines noted at the larger Bay-wide scale suggest that this study area maybe symptomatic of a systemic limitation of nesting habitat for these species. The island losses noted in the Chesapeake have also been noted in other Atlantic U. S. coastal states. Stabilization and/or restoration of at least some of the rapidly eroding islands at key coastal areas are critical to help sustain waterbird communities. ?? 2010 US Government.

  2. San Francisco Bay, California as seen from STS-59

    Science.gov (United States)

    1994-01-01

    San Francisco Bay as seen from STS-59. View is oriented with the sea up. The delta of the combined Sacramento and San Joaquin Rivers occupies the foreground with San Francisco Bay in the middle distance, then the Pacific Ocean. Variations in water color caused both by sediment load and by wind streaking strike the eye. Man-made features dominate this scene. The Lafayette/Concord complex is left of the bay head, Vallejo is to the right, the Berkeley/Oakland complex rims the shoreline of the main bay, and San Francisco fills the peninsula beyond. Salt-evaporation ponds contain differently-colored algae depending on salinity. The low altitude (less than 120 nautical miles) and unusually-clear air combine to provide unusually-strong green colors in this Spring scene.

  3. California Least Tern breeding survey south San Francisco Bay

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report documents the field work conducted by members -of the South Bay Institute for Avian Studies during 1981. The primary purpose of this study was to survey...

  4. Depth to Transition--Pigeon Point to South Monterey Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the depth-to-transition map of the Pigeon Point to South Monterey Bay, California, region. The raster data file is included in...

  5. 33 CFR 165.1154 - Security Zones; Cruise Ships, San Pedro Bay, California.

    Science.gov (United States)

    2010-07-01

    ... ship that is moored, or is in the process of mooring, at any berth within the Los Angeles or Long Beach... § 165.1154 Security Zones; Cruise Ships, San Pedro Bay, California. (a) Definition. “Cruise ship” as..., extending from the surface to the sea floor, within a 100 yard radius around any cruise ship that...

  6. Petrogenesis of serpentinites from the Franciscan Complex, western California, USA

    Science.gov (United States)

    Barnes, Jaime D.; Eldam, Rania; Lee, Cin-Ty A.; Errico, Jessica C.; Loewy, Staci; Cisneros, Miguel

    2013-09-01

    Serpentinites from the Franciscan Complex of California, USA, were analyzed for their bulk major and trace element compositions, relict mineral (spinel and pyroxene) compositions, and stable isotope (O, H, Cl) compositions with the goal of determining protolith origin and subsequent serpentinizing fluid sources in order to decipher the tectonic setting of serpentinization. We focused on serpentinite bodies found in the Franciscan Complex (west of Cuesta Ridge; south of San Francisco; Tiburon Peninsula; Healdsburg) (n = 12). Three samples from Cuesta Ridge (part of the Coast Range ophiolite) were also analyzed for comparison. Serpentinites from Cuesta Ridge have flat to U-shaped chondrite-normalized REE patterns and spinels with Cr# values > 0.60 implying a supra-subduction zone origin. In contrast, Franciscan serpentinites west of Cuesta Ridge and Tiburon Peninsula have positive-sloped REE patterns. This depletion in LREE is typical of abyssal peridotites. Most relict spinels have low Cr# values (Peninsula have high HREE concentrations, also supporting an abyssal origin. Franciscan serpentinite samples from south of San Francisco and near Healdsburg have U-shaped REE patterns and spinel compositions that lie within the forearc peridotite field with some overlap into the abyssal field and are of more ambiguous origin. All samples are high in fluid-mobile elements with remarkable positive Ce and Y anomalies. We speculate that these anomalies may be due to involvement of highly oxidizing fluids resulting in the preferential scavenging of Ce and Y by ferromanganese oxyhydroxides during serpentinization. All samples (except those south of San Francisco) have δ18O values of + 5.4 to + 7.9‰, typical values for oceanic serpentinites formed via low-T seawater hydration on the seafloor. δD values of all samples are extremely low (- 107 to - 90‰), likely the result of post-serpentinization, post-emplacement interaction with meteoric water at low temperature. Samples

  7. Remote sensing of water quality and contaminants in the California Bay-Delta

    Science.gov (United States)

    Fichot, C. G.; Downing, B. D.; Windham-Myers, L.; Marvin-DiPasquale, M. C.; Bergamaschi, B. A.; Thompson, D. R.; Gierach, M. M.

    2014-12-01

    The California Bay-Delta is a highly altered ecosystem largely reclaimed from wetlands for agriculture, and millions of acres of farmland and Californians rely on the Bay-Delta for their water supply. The Bay-Delta also harbors important habitats for many organisms, including commercial and endangered species. Recently, the Delta Stewardship Council developed a two component mission (coequal goals) to 1) provide a more reliable water supply for California while 2) protecting, restoring, and enhancing the Bay-Delta ecosystem. Dissolved organic carbon, turbidity, and contaminants such as methylmercury represent important water quality issues for water management and in the context of wetland restoration in the Bay-Delta, and can threaten the achievement of the coequal goals. Here, we use field measurements of optical properties, chemical analyses, and remotely sensed data acquired with the airborne Portable Remote Imaging SpectroMeter (PRISM ; http://prism.jpl.nasa.gov/index.html) to demonstrate these water quality parameters and the study of their dynamics in the Bay-Delta are amenable to remote sensing. PRISM provides high signal-to-noise, high spatial resolution (~2 m), hyperspectral measurements of remote-sensing reflectance in the 350-1050 nm range, and therefore has the adequate resolutions for water quality monitoring in inland, optically complex waters. Remote sensing of water quality will represent a valuable complement to existing in situ water quality monitoring programs in this region and will help with decision-making to achieve the co-equal goals.

  8. Spatial and temporal trends of contaminants in eggs of wading birds from San Francisco Bay, California

    Energy Technology Data Exchange (ETDEWEB)

    Hothem, R.L.; Marois, K.C.; Wainwright, S.E. [National Biological Service, Davis, CA (United States); Roster, D.L. [Fish and Wildlife Service, Newark, CA (United States). San Francisco Bay National Wildlife Refuge; King, K.A. [Fish and Wildlife Service, Phoenix, AZ (United States). Ecological Services; Keldsen, T.J. [National Biological Service, Fort Collins, CO (United States). Midcontinent Ecological Science Center

    1995-08-01

    Between 1989 and 1991, reproduction by black-crowned night-herons (Nycticorax nycticorax) and snowy egrets (Egretta thula) was studied at sites in San Francisco Bay. Eggs were collected from these and other bay sites and from South Wilbur Flood Area, a reference site in California`s San Joaquin Valley. Eggs were analyzed for inorganic trace elements, organochlorine pesticides, and polychlorinated biphenyls (PCBs). Results were compared among sites and years and with results of previous studies. There was some evidence of impaired reproduction, but concentrations of contaminants were generally lower than threshold levels for such effects. Egg hatchability was generally good, with predation being the factor that most limited reproductive success. Mean PCB concentrations were generally higher in eggs from the south end of San Francisco Bay than from the north, but the only temporal change, an increase, was observed at Alcatraz Island. There were spatial differences for p,p{prime}-DDE in night-heron eggs in 1990, but the highest mean concentration of DDE was in night-heron eggs from South Wilbur in 1991. Temporal declines in maximum concentrations of DDE in eggs were observed in the bay, but means did not change significantly over time. At Bair Island in the southern end of the bay, mean concentrations of mercury decreased while selenium increased in night-heron eggs over time, but there were no clear bay-wide spatial or temporal trends for either element.

  9. Contours--Offshore of Half Moon Bay, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — This part of DS 781 presents data for the bathymetric contours for several seafloor maps of the Offshore of Half Moon map area, California. The vector data file is...

  10. Bartonella quintana in Body Lice and Head Lice from Homeless Persons, San Francisco, California, USA

    OpenAIRE

    Bonilla, Denise L.; Kabeya, Hidenori; Henn, Jennifer; Kramer, Vicki L.; Kosoy, Michael Y

    2009-01-01

    Bartonella quintana is a bacterium that causes trench fever in humans. Past reports have shown Bartonella spp. infections in homeless populations in San Francisco, California, USA. The California Department of Public Health in collaboration with San Francisco Project Homeless Connect initiated a program in 2007 to collect lice from the homeless to test for B. quintana and to educate the homeless and their caregivers on prevention and control of louse-borne disease. During 2007–2008, 33.3% of ...

  11. Modeling Water and Sediment Quality in Two California Bays

    OpenAIRE

    Stolzenbach, Keith; McWilliams, James

    2002-01-01

    While polluted coastal bays have often been studied observationally, less effort has focused on developing computer models that simulate the processes that disperse, depositand resuspend pollution and contaminants on the seabed. Such models would not only help interpret observational data but would also benefit resource managers charged with upholding state and federal clean water laws.

  12. Analysis of acoustic ambient noise in Monterey Bay, California.

    OpenAIRE

    Elles, Christopher Jacob.

    1982-01-01

    Approved for public release; distribution is unlimited Magnetic tape recordings, made in 1980 and 1981 by previous investigators using sonobuoys, of acoustic ambient noise in the south-eastern parts of Monterey Bay for various stations under various surf conditions, were analyzed. A computer program was developed and used with sonobuoy calibration data to correct :raw-data" to absolute sound pressure levels. The variation of omnidirectional levels with range from the beach as a function ...

  13. Hepatitis E Virus among Persons Who Inject Drugs, San Diego, California, USA, 2009–2010

    OpenAIRE

    Mahajan, Reena; Collier, Melissa G.; Kamili, Saleem; Drobeniuc, Jan; Cuevas-Mota, Jazmine; Garfein, Richard S.; Teshale, Eyasu

    2013-01-01

    Data about prevalence of hepatitis E virus infection in persons who inject drugs are limited. Among 18–40-year-old persons who inject drugs in California, USA, prevalence of antibodies against hepatitis E virus was 2.7%. This prevalence was associated with age but not with homelessness, incarceration, or high-risk sexual behavior.

  14. Coastal Ocean Observing System Elements for the Southern California Bight and Santa Monica Bay

    OpenAIRE

    Gruber, Nicolas; Mcwilliams, James C.

    2005-01-01

    We propose to establish, maintain, and augment the sensors for UCLA's oceanographic mooring near the edge of the continental shelf in Santa Monica Bay; extensively sample the water quality within the surrounding region; and interpret the measurements in combination with satellite sensing and three-dimensional, fine-scale numerical simulations of the local region. This will be done in coordination with other proposed measurements in the Southern California Bight that collectively are establish...

  15. Ecology of fishes in Upper Newport Bay, California: seasonal dynamics and community structure

    OpenAIRE

    Horn, Michael H.; Allen, Larry G.

    1981-01-01

    A total of 366 bimonthly (January 1978-January 1979) samples taken with six types of gear (otter trawl, gill net, bag seine, small seine, drop net, square enclosure - all with replication except the gill net) at four stations in upper Newport Bay, California yielded 51,816 fishes belonging to 46 species and weighing over 353 kg. Atherinops affinis (topsmelt) was the most abundant species accounting for 76% of total individuals. Seven species, all of low trophic levels, made up over 97% ...

  16. Municipal and industrial wastewater loading in the San Francisco Bay, California, 1970

    Science.gov (United States)

    Hines, W.G.; Palmer, R.H.

    1971-01-01

    The purpose of this release is to describe the approximate volumes and significant pollutional loading attributable to municipal and industrial wastewater discharged into the San Francisco Bay. The six receiving-water regions (fig.1) are the same as those used previously by Pearson, Storrs, and Selleck (1969) in describing results of the comprehensive wastewater-monitoring program conducted by the University of California, Berkeley, during the period 1960-64.

  17. Radiological dose to man through the marine pathway from reactor operations at Humboldt Bay, California

    International Nuclear Information System (INIS)

    Source-strength measurements and environmental samples taken at the Humboldt Bay Nuclear Reactor site near Eureka, California, since mid-1971 were used to evaluate the potential dose to man resulting from an aquatic release of radioactivity from the reactor. In this report, we provide an evaluation of individual and population dose through the marine pathways during 1972 and 1973 computed by the methods recommended by the U.S. Nuclear Regulatory Commission

  18. Tidal Marsh Vegetation of China Camp, San Pablo Bay, California

    OpenAIRE

    Baye, Peter R.

    2012-01-01

    China Camp (Marin County, California) preserves extensive relict stands of salt marsh vegetation developed on a prehistoric salt marsh platform with a complex sinuous tidal creek network. The low salt marsh along tidal creeks supports extensive native stands of Pacific cordgrass (Spartina foliosa). The outer salt marsh accreted following hydraulic gold mining sedimentation. It consists of a wave-scarped pickleweed-dominated (Sarcocornia pacifica) high salt marsh terrace with a broad fringing ...

  19. Evaluation of older bay mud sediment from Richmond Harbor, California

    Energy Technology Data Exchange (ETDEWEB)

    Pinza, M.R.; Mayhew, H.L.; Word, J.Q.

    1996-09-01

    The older, bay mud (OBM) unit predates modem man and could act as a barrier to the downward transport of contaminants from the younger bay mud (YBM) because of its hard-packed consistency. However, its chemical and biological nature have not been well characterized. Battelle/Marine Sciences Laboratory (MSL) conducted three independent studies of OBM sediment in January 1993, January 1994, and October 1994. These studies evaluated potential chemical contamination and biological effects of OBM that could occur as a result of dredging and disposal activities. These evaluations were performed by conducting chemical analysis, solid-phase toxicity tests, suspended- particulate-phase (SPP) toxicity tests, and bioaccumulation tests on the OBM sediment. If the sediment chemistry and toxicity results showed no or minimal contamination and toxicological responses, then either the OBM could be left exposed in Richmond Harbor after dredging the YBM without leaving a source of contamination, or if the project depths necessitate, the OBM would be acceptable for disposal at an appropriate disposal site.

  20. Climate Change and the Evolution and Fate of the Tangier Islands of Chesapeake Bay, USA

    Science.gov (United States)

    Schulte, David M.; Dridge, Karin M.; Hudgins, Mark H.

    2015-12-01

    Climate change and associated sea level rise (SLR) are already impacting low-lying coastal areas, including islands, throughout the world. Many of these areas are inhabited, many will need to be abandoned in coming decades as SLR continues. We examine the evolution (1850-2013) of the last inhabited offshore island in Virginia waters of Chesapeake Bay USA, the Tangier Islands. Three SLR scenarios, a low, mid, and high, were considered. Since 1850, 66.75% of the islands landmass has been lost. Under the mid-range SLR scenario, much of the remaining landmass is expected to be lost in the next 50 years and the Town will likely need to be abandoned. The high SLR scenario will accelerate the land loss and subsidence, such that the Town may need to be abandoned in as few as 25 years. We propose a conceptual plan that would significantly extend the lifespan of the islands and Town.

  1. 3000 years of environmental change at Zaca Lake, California, USA

    Directory of Open Access Journals (Sweden)

    Theodore eDingemans

    2014-07-01

    Full Text Available Climatic variations of the last few millennia can reveal patterns of variability beyond that recorded by the instrumental record. In this study we use pollen and sediments to generate a high resolution 3000 year record of vegetation and climate along the southern California coast. An increase in Pinus and Quercus pollen found in the top 100 years of the record is a result of known planting and fire suppression by the forest service. In the pre-historic record, a period of high Salix percentages and high pollen concentration from 500-250 cal yr BP represents the wettest period of the record and coincides with the Little Ice Age. We also find evidence for 3 warm periods between 1350 and 650 cal yr BP which are identified in the record by the presence of Pediastrum boryanum var. boryanum. The latter two of these periods, dating from 1070-900 and 700–650 cal yr BP correspond to Medieval Climatic Anomaly droughts identified in other records. In addition to these events, we identify a multi-centennial scale drought between 2700 and 2000 cal yr BP in Zaca Lake, corroborating evidence from across the Great Basin and extending the regional spread of this multi-centennial drought to southern California. Corresponding wetter conditions in the northwest indicate that the modern ENSO precipitation dipole also occurred during this persistent drought. Today this dipole is associated with La Niña conditions and we note a coincidence with intriguing evidence for a change in ENSO dynamics from marine records in the tropical Pacific. This dry period is remarkably persistent and has important implications for understanding the possible durations of drought conditions in the past in California.

  2. Impact of storm-water outfalls on sediment quality in Corpus Christi Bay, Texas, USA

    Energy Technology Data Exchange (ETDEWEB)

    Carr, R.S.; Montagna, P.A.; Biedenbach, J.M.; Kalke, R.; Kennicutt, M.C.; Hooten, R.; Cripe, G.

    2000-03-01

    To determine the quality of sediments and extent of contaminant impacts, a Sediment Quality Triad (SQT) study was conducted at 36 sites in the Corpus Christi Bay, Texas, USA, system. Fifteen of the 36 sites were located near storm-water outfalls, but 13 other sites (i.e., industrial and domestic outfalls, oil field-produced water discharges, and dredging activity) and eight reference sites were also evaluated. Sediment samples were collected and analyzed for physical-chemical characteristics, contaminant concentrations (metals, polycyclic aromatic hydrocarbons [PAHs], polychlorinated biphenyls [PCBs], and pesticides), toxicity, and a benthic index of biotic integrity (BIBI) composed of 10 independent metrics calculated for each site. This large data matrix was reduced using multivariate analysis to create new variables for each component representing overall means and containing most of the variance in the larger data set. The new variables were used to conduct the correlation analysis. Toxicity was significantly correlated with both chemistry and ecological responses, whereas no correlations between the benthic metrics and sediment chemistry were observed. Using the combined information from the SQT, four of the five most degraded sites were storm-water outfall sites. Although estuaries are naturally stressful environments because of salinity and temperature fluctuations, this ecosystem appears to have been compromised by anthropogenic influences similar to what has been observed for other heavily urbanized bay systems along the Texas and Gulf coast.

  3. Coupled Wave Energy and Erosion Dynamics along a Salt Marsh Boundary, Hog Island Bay, Virginia, USA

    Directory of Open Access Journals (Sweden)

    Anthony M. Priestas

    2015-09-01

    Full Text Available The relationship between lateral erosion of salt marshes and wind waves is studied in Hog Island Bay, Virginia USA, with high-resolution field measurements and aerial photographs. Marsh retreat is compared to wave climate calculated in the bay using the spectral wave-model Simulating Waves Nearshore (SWAN. We confirm the existence of a linear relationship between long-term salt marsh erosion and wave energy, and show that wave power can serve as a good proxy for average salt-marsh erosion rates. At each site, erosion rates are consistent across several temporal scales, ranging from months to decades, and are strongly related to wave power. On the contrary, erosion rates vary in space and weakly depend on the spatial distribution of wave energy. We ascribe this variability to spatial variations in geotechnical, biological, and morphological marsh attributes. Our detailed field measurements indicate that at a small spatial scale (tens of meters, a positive feedback between salt marsh geometry and wave action causes erosion rates to increase with boundary sinuosity. However, at the scale of the entire marsh boundary (hundreds of meters, this relationship is reversed: those sites that are more rapidly eroding have a marsh boundary which is significantly smoother than the marsh boundary of sheltered and slowly eroding marshes.

  4. Benthic flux of nutrients and trace metals in the northern component of San Francisco Bay, California

    Science.gov (United States)

    Kuwabara, James S.; Topping, Brent R.; Parcheso, Francis; Engelstad, Anita C.; Greene, Valerie E.

    2009-01-01

    Two sets of sampling trips were coordinated in late summer 2008 (weeks of July 8 and August 6) to sample the interstitial and overlying bottom waters at 10 shallow locations (9 sites metals) that may affect the base of the food web in this part of the estuary. A nonmetallic pore-water profiler was used to obtain the first centimeter-scale estimates of the vertical solute-concentration gradients for diffusive-flux determinations. This study, performed in collaboration with scientists from San Francisco State University?s Romberg Tiburon Center for Environmental Studies, provides information to assist in developing and refining management strategies for the Bay/Delta system and supports efforts to monitor changes in food-web structure associated with regional habitat modifications directed by the California Bay-Delta Authority. On July 7, 2008, and August 5, 2008, pore-water profilers were successfully deployed at six North Bay sites per trip to measure the concentration gradient of dissolved macronutrients and trace metals near the sediment-water interface. Only two of the sites (433 and SSB009 within Honker Bay) were sampled in both series of profiler deployments. At each sampling site, profilers were deployed in triplicate, while discrete samples and dataloggers were used to collect ancillary data from both the water column and benthos to help interpret diffusive-flux measurements. Benthic flux of dissolved (0.2-micron filtered) inorganic phosphate (that is, soluble reactive phosphorus (SRP)) ranged from negligible levels (-0.003?0.005 millimole per square meter per day (mmole m-2d-1) at Site 4.1 outside Honker Bay) to 0.060?0.006 mmole m-2d-1 near the northern coast of Brown?s Island. Except for the elevated flux at Browns Island, the benthic flux of soluble reactive phosphorus (SRP) was consistently: (1) lower than previously reported for South Bay sites, (2) an order of magnitude lower than oligotrophic Coeur d?Alene Lake, (3) two orders of magnitude lower than

  5. Integrated Science Investigations of the Salton Sea, California, USA

    Science.gov (United States)

    Barnum, D.

    2006-12-01

    The Salton Sea is the latest waterbody to be formed by Colorado River floodwaters within the Salton Trough. Over the past 100 years, floodwaters have been replaced by agricultural drainage water and municipal discharges so that today, most of the water reaching the Salton Sea is agricultural drainwater flowing down the New, Alamo and Whitewater Rivers. An evaporation of about 6 feet per year and inputs of more than 4 million tons of salt per year have increased salinity of the waters of the Salton Sea. The current salinity level of approximately 46 parts per thousand is about 25% more saline than ocean water. Diverting water from the Imperial Valley agricultural lands to urban Southern California, and anticipated loss of inflows from Mexico and increasing water conservation activities will result in less water flowing into the Salton Sea. A Restoration Program is being conducted to evaluate the effects of diminished inflows on the Salton Sea Ecosystem and recommend alternatives to avoid or minimize those effects. The Salton Sea has become increasingly important as habitat for migratory birds because of wetland losses. California has lost approximately 91% of interior wetland acreage from pre-settlement until the mid-1980's. The Salton Sea provides critical habitat linking distant wetlands of Pacific and Central Flyways to wintering habitats in Mexico and Central and South America. More than 400 species of birds have been observed in the Salton Sea Ecosystem. Large percentages of the populations for several bird species such as the endangered Yuma Clapper Rail, the Eared Grebe, Snowy Plover and American White Pelican utilize the Salton Sea. Approximately 20 species of conservation concern utilize the Salton Sea ecosystem. Fish-eating birds such as Great Blue Herons, California Brown Pelicans, Double-crested Cormorants and several species of egrets are highly dependent upon the fishery of the Salton Sea. The Salton Sea fishery is now primarily comprised of tilapia

  6. Benthic macrofauna and ancillary data for San Francisco Bay, California, March to November 1987

    Science.gov (United States)

    Schemel, Laurence E.; Ota, Allan Y.; Harmon, J.G.; Shay, J.M.; Adorado, R.N.

    1988-01-01

    Benthic macrofauna and ancillary data were collected during 1987 as part of the U.S. Geological Survey Regional Effects Monitoring Program in San Francisco Bay, California. Data were collected during five cruises at 2-month intervals from March through November. Benthic macrofauna for identification of species and sediment for size analysis were sampled at eight stations. Ancillary data, which consisted of salinity, temperature, dissolved-oxygen concentrations, and suspended sediment, were collected at 12 stations. Salinity and temperature were measured at three stations that coincided with continuous water quality monitors. Abundances and geographical distributions of a newly introduced species of clam were measured. (USGS)

  7. Island abandonment and sea-level rise: an historical analog from the Chesapeake Bay, USA

    Energy Technology Data Exchange (ETDEWEB)

    Gibbons, S.J.A. [Wilfrid Laurier University, Waterloo (Canada). Dept. of Geography and Enivronmental Studies; Nicholls, R.J. [University of Southampton (United Kingdom). School of Civil Engineering

    2006-02-15

    Small islands are widely agreed to be vulnerable to human-induced sea-level rise during the 21st century and beyond, with forced abandonment of some low-lying oceanic islands being a real possibility. A regional abandonment of islands in the Chesapeake Bay, USA provides an historical analog of such vulnerability as this has been linked to a mid 19th Century acceleration in relative sea-level rise. Using a case study approach for Holland Island, Maryland, this hypothesis was tested using a range of physical and human historical data. While sea-level rise was the underlying driver, this analysis shows that the abandonment was more complex than a direct response to sea-level rise. Between 1850 and 1900, Holland Island was a booming community and population increased from 37 to 253, with immigration causing the majority of the increase. At the same time, the upland area where people made their homes was steadily diminishing, losing about 15 ha or 38% of the total. After 1900, the island experienced a decrease in population to 169 in 1916, with final abandonment in 1918, with the exception of one family who left by 1920. Final abandonment was triggered by this depopulation as the population fell below a level that could support critical community services, and the community lost faith in their future on Holland Island. It is likely that similar social processes determined the abandonment of the other Chesapeake Bay islands. Looking to the future, it shows that many small low-lying islands could be abandoned due to sea-level rise long before they become physically uninhabitable. (author)

  8. The Golden Gate Textile Barrier: Preserving California Bay of San Francisco from a Rising North Pacific Ocean

    CERN Document Server

    Cathcart, R B; Bolonkin, Alexander A.; Cathcart, Richart B.

    2007-01-01

    Climate change in California may require construction of a barrier separating the Pacific Ocean from San Francisco Bay and the Sacramento River-San Joaquin River Delta simply because Southern California is remarkably dependent on freshwater exported from the Delta. We offer a new kind of salt barrier, a macroproject built of impermeable textile materials stretched across the Golden Gate beneath the famous bridge. We anticipate it might eventually substitute for a recently proposed San Francisco In-Stream Tidal Power Plant harnessing a 1.7 m tide at the Bay entrance if future climate conditions Statewide is conducive. First-glance physics underpin our macroproject.

  9. Hydro-economic analysis of groundwater pumping for irrigated agriculture in California's Central Valley, USA

    Science.gov (United States)

    Medellín-Azuara, Josué; MacEwan, Duncan; Howitt, Richard E.; Koruakos, George; Dogrul, Emin C.; Brush, Charles F.; Kadir, Tariq N.; Harter, Thomas; Melton, Forrest; Lund, Jay R.

    2015-09-01

    As in many places, groundwater in California (USA) is the major alternative water source for agriculture during drought, so groundwater's availability will drive some inevitable changes in the state's water management. Currently, agricultural, environmental, and urban uses compete for groundwater, resulting in substantial overdraft in dry years with lowering of water tables, which in turn increases pumping costs and reduces groundwater pumping capacity. In this study, SWAP (an economic model of agricultural production and water use in California) and C2VISim (the California Department of Water Resources groundwater model for California's Central Valley) are connected. This paper examines the economic costs of pumping replacement groundwater during drought and the potential loss of pumping capacity as groundwater levels drop. A scenario of three additional drought years continuing from 2014 show lower water tables in California's Central Valley and loss of pumping capacity. Places without access to groundwater and with uncertain surface-water deliveries during drought are the most economically vulnerable in terms of crop revenues, employment and household income. This is particularly true for Tulare Lake Basin, which relies heavily on water imported from the Sacramento-San Joaquin Delta. Remote-sensing estimates of idle agricultural land between 2012 and 2014 confirm this finding. Results also point to the potential of a portfolio approach for agriculture, in which crop mixing and conservation practices have substantial roles.

  10. A simulation of groundwater discharge and nitrate delivery to chesapeake bay from the lowermost delmarva peninsula, USA

    Science.gov (United States)

    Sanford, W.E.; Pope, J.P.

    2007-01-01

    A groundwater model has been developed for the lowermost Delmarva Peninsula, USA, that simulates saltwater intrusion into local confined aquifers and nitrate delivery to the Chesapeake Bay from the surficial aquifer. A flow path and groundwater-age analysis was performed using the model to estimate the timing of nitrate delivery to the bay over the next several decades. The simulated mean and median residence times of groundwater in the lowermost peninsula are 30 and 15 years, respectively. Current and future nitrate concentrations in coastal groundwater discharge were simulated based on local well data that include nitrate concentrations and groundwater age. A simulated future-trends analysis indicates that nitrate that has been applied to agricultural regions over the last few decades will continue to discharge into the bay for several decades to come. This study highlights the importance of considering the groundwater lag time that affects the mean transport time from diffuse contamination sources.

  11. Anatomy of the Chesapeake Bay impact structure revealed by seismic imaging, Delmarva Peninsula, Virginia, USA

    Science.gov (United States)

    Catchings, R.D.; Powars, D.S.; Gohn, G.S.; Horton, J.W., Jr.; Goldman, M.R.; Hole, J.A.

    2008-01-01

    A 30-km-long, radial seismic reflection and refraction survey completed across the northern part of the late Eocene Chesapeake Bay impact structure (CBIS) on the Delmarva Peninsula, Virginia, USA, confirms that the CBIS is a complex central-peak crater. We used a tomographic P wave velocity model and low-fold reflection images, constrained by data from two deep boreholes located on the profile, to interpret the structure and composition of the upper 5 km of crust. The seismic images exhibit well-defined structural features, including (with increasing radial distance) a collapsed central uplift, a breccia-filled moat, and a collapsed transient-crater margin (which collectively constitute a ???40-km-wide collapsed transient crater), and a shallowly deformed annular trough. These seismic images are the first to resolve the deep structure of the crater (>1 km) and the boundaries between the central uplift, moat, and annular trough. Several distinct seismic signatures distinguish breccia units from each other and from more coherent crystalline rocks below the central uplift, moat, and annular trough. Within the moat, breccia extends to a minimum depth of 1.5 km or a maximum of 3.5 km, depending upon the interpretation of the deepest layered materials. The images show ???350 to 500 m of postimpact sediments above the impactites. The imaged structure of the CBIS indicates a complex sequence of event during the cratering process that will provide new constraints for numerical modeling. Copyright 2008 by the American Geophysical Union.

  12. Automated feature extraction and spatial organization of seafloor pockmarks, Belfast Bay, Maine, USA

    Science.gov (United States)

    Andrews, B.D.; Brothers, L.L.; Barnhardt, W.A.

    2010-01-01

    Seafloor pockmarks occur worldwide and may represent millions of m3 of continental shelf erosion, but few numerical analyses of their morphology and spatial distribution of pockmarks exist. We introduce a quantitative definition of pockmark morphology and, based on this definition, propose a three-step geomorphometric method to identify and extract pockmarks from high-resolution swath bathymetry. We apply this GIS-implemented approach to 25km2 of bathymetry collected in the Belfast Bay, Maine USA pockmark field. Our model extracted 1767 pockmarks and found a linear pockmark depth-to-diameter ratio for pockmarks field-wide. Mean pockmark depth is 7.6m and mean diameter is 84.8m. Pockmark distribution is non-random, and nearly half of the field's pockmarks occur in chains. The most prominent chains are oriented semi-normal to the steepest gradient in Holocene sediment thickness. A descriptive model yields field-wide spatial statistics indicating that pockmarks are distributed in non-random clusters. Results enable quantitative comparison of pockmarks in fields worldwide as well as similar concave features, such as impact craters, dolines, or salt pools. ?? 2010.

  13. Rates and risk factors for Coccidioidomycosis among prison inmates, California, USA, 2011.

    Science.gov (United States)

    Wheeler, Charlotte; Lucas, Kimberley D; Mohle-Boetani, Janet C

    2015-01-01

    In California, coccidioidomycosis is a disease acquired by inhaling spores of Coccidioides immitis, a fungus found in certain arid regions, including the San Joaquin Valley, California, USA, where 8 state prisons are located. During 2011, we reviewed coccidioidomycosis rates at 2 of the prisons that consistently report >80% of California's inmate cases and determined inmate risk factors for primary, severe (defined as pulmonary coccidioidomycosis requiring >10 hospital days), and disseminated coccidioidomycosis (defined by hospital discharge International Classification of Disease, Ninth Revision code). Inmates of African American ethnicity who were >40 years of age were at significantly higher risk for primary coccidioidomycosis than their white counterparts (odds ratio = 2.0, 95% CI 1.5-2.8). Diabetes was a risk factor for severe pulmonary coccidioidomycosis, and black race a risk factor for disseminated disease. These findings contributed to a court decision mandating exclusion of black inmates and inmates with diabetes from the 2 California prisons with the highest rates of coccidioidomycosis. PMID:25533149

  14. Sediment accumulation in San Leandro Bay, Alameda County, California, during the 20th century - A preliminary report

    International Nuclear Information System (INIS)

    Major changes made in the configuration of San Leandro Bay, Alameda County, California, during the 20th century have caused rapid sedimentation within parts of the Bay. Comparison of bathymetric surveys indicates that sedimentation in the vicinity of the San Leandro Bay channel averaged 0.7 cm/annum between 1856 and 1984. Lead-210 data collected at four shallow water sites east of the San Leandro Bay channel indicated that sedimentation rates have averaged between 0.06 and 0.28 cm/annum. Because bioturbation of bottom sediments cannot be discounted, better definition of this range in sedimentation rates would require measuring the activity of lead-210 on incoming sediments. In addition to sediment deposited in the vicinity of the San Leandro Bay channel and open, shallow areas to the east, 850,740 cu m of sediment was deposited between 1948 and 1983 in an area dredged at the mouth of San Leandro Creek. All available data indicate that between 1,213,000 and 1,364,000 cu m of sediment was deposited in San Leandro Bay between 1948 and 1983. Sediment yield data from an adjacent drainage basin, when combined with inventories of lead-210 and cesium-137, indicate that most of the sediment deposited in San Leandro Bay is coming from resuspension of bottom sediments or from erosion of marshes or shorelines of San Leandro or San Francisco Bay. 31 refs., 7 figs., 4 tabs

  15. Validation of MODIS FLH and In Situ Chlorophyll a from Tampa Bay, Florida (USA)

    Science.gov (United States)

    Fischer, Andrew; MorenoMadrinan, Max J.

    2012-01-01

    Satellite observation of phytoplankton concentration or chlorophyll-a (chla) is an important characteristic, critically integral to monitoring coastal water quality. However, the optical properties of estuarine and coastal waters are highly variable and complex and pose a great challenge for accurate analysis. Constituents such as suspended solids and dissolved organic matter and the overlapping and uncorrelated absorptions in the blue region of the spectrum renders the blue-green ratio algorithms for estimating chl-a inaccurate. Measurement of suninduced chlorophyll fluorescence, on the other hand, which utilizes the near infrared portion of the electromagnetic spectrum may, provide a better estimate of phytoplankton concentrations. While modelling and laboratory studies have illustrated both the utility and limitations of satellite algorithms based on the sun induced chlorophyll fluorescence signal, few have examined the empirical validity of these algorithms or compared their accuracy against bluegreen ratio algorithms . In an unprecedented analysis using a long term (2003-2011) in situ monitoring data set from Tampa Bay, Florida (USA), we assess the validity of the FLH product from the Moderate Resolution Imaging Spectrometer against a suite of water quality parameters taken in a variety of conditions throughout this large optically complex estuarine system. . Overall, the results show a 106% increase in the validity of chla concentration estimation using FLH over the standard chla estimate from the blue-green OC3M algorithm. Additionally, a systematic analysis of sampling sites throughout the bay is undertaken to understand how the FLH product responds to varying conditions in the estuary and correlations are conducted to see how the relationships between satellite FLH and in situ chlorophyll-a change with depth, distance from shore, from structures like bridges, and nutrient concentrations and turbidity. Such analysis illustrates that the correlations between

  16. Some challenges of an 'upside down' nitrogen budget - Science and management in Greenwich Bay, RI (USA)

    International Nuclear Information System (INIS)

    Research highlights: → Nutrient budget found most nitrogen to Greenwich Bay, RI is from adjacent estuary. → Water, plants, and animals in Greenwich Bay all have similar high stable isotope values. → Flux weighted isotope budgets find 50-80% of nitrogen in clams from adjacent bay. - Abstract: When nutrients impact estuarine water quality, scientists and managers instinctively focus on quantifying and controlling land-based sources. However, in Greenwich Bay, RI, the estuary opens onto a larger and more intensively fertilized coastal water body (Narragansett Bay). Previous inventories of nitrogen (N) inputs to Greenwich Bay found that N inputs from Narragansett Bay exceeded those from the local watershed, suggesting that recent efforts to reduce local watershed N loads may have little effect on estuarine water quality. We used stable isotopes of N to characterize watershed and Narragansett Bay N sources as well as the composition of primary producers and consumers throughout Greenwich Bay. Results were consistent with previous assessments of the importance of N inputs to Greenwich Bay from Narragansett Bay. As multiple N sources contribute to estuarine water quality, effective management requires attention to individual sources commensurate with overall magnitude, regardless of the political complications that may entail.

  17. Macrobenthic community response to copper in Shelter Island Yacht Basin, San Diego Bay, California.

    Science.gov (United States)

    Neira, Carlos; Mendoza, Guillermo; Levin, Lisa A; Zirino, Alberto; Delgadillo-Hinojosa, Francisco; Porrachia, Magali; Deheyn, Dimitri D

    2011-04-01

    We examined Cu contamination effects on macrobenthic communities and Cu concentration in invertebrates within Shelter Island Yacht Basin, San Diego Bay, California. Results indicate that at some sites, Cu in sediment has exceeded a threshold for "self defense" mechanisms and highlight the potential negative impacts on benthic faunal communities where Cu accumulates and persists in sediments. At sites with elevated Cu levels in sediment, macrobenthic communities were not only less diverse but also their total biomass and body size (individual biomass) were reduced compared to sites with lower Cu. Cu concentration in tissue varied between species and within the same species, reflecting differing abilities to "regulate" their body load. The spatial complexity of Cu effects in a small marina such as SIYB emphasizes that sediment-quality criteria based solely on laboratory experiments should be used with caution, as they do not necessarily reflect the condition at the community and ecosystem levels. PMID:21354577

  18. Dietary mercury exposure to endangered California Clapper Rails in San Francisco Bay

    Science.gov (United States)

    Casazza, Michael L.; Ricca, Mark A.; Overton, Cory T.; Takekawa, John Y.; Merritt, Angela M.; Ackerman, Joshua T.

    2015-01-01

    California Clapper Rails (Rallus longirostris obsoletus) are an endangered waterbird that forage in tidal-marsh habitats that pose risks from mercury exposure. We analyzed total mercury (Hg) in six macro-invertebrate and one fish species representing Clapper Rail diets from four tidal-marshes in San Francisco Bay, California. Mercury concentrations among individual taxa ranged from lowest at Colma Creek (mean range: 0.09–0.2 μg/g dw) to highest at Cogswell (0.2–0.7), Laumeister (0.2–0.9) and Arrowhead Marshes (0.3–1.9). These spatial patterns for Hg matched patterns reported previously in Clapper Rail blood from the same four marshes. Over 25% of eastern mudsnails (Ilyanassa obsolete) and staghorn sculpin (Leptocottus armatus) exceeded dietary Hg concentrations (ww) often associated with avian reproductive impairment. Our results indicate that Hg concentrations vary considerably among tidal-marshes and diet taxa, and Hg concentrations of prey may provide an appropriate proxy for relative exposure risk for Clapper Rails.

  19. USA

    DEFF Research Database (Denmark)

    Nedergaard, Peter

    http://www.systime.dk/ungdomsuddannelser/almen-studieforberedelse/usa-en-grundbog-i-politik-og-okonomi.html......http://www.systime.dk/ungdomsuddannelser/almen-studieforberedelse/usa-en-grundbog-i-politik-og-okonomi.html...

  20. Evidence for natural molecular hydrogen seepage associated with Carolina bays (surficial, ovoid depressions on the Atlantic Coastal Plain, Province of the USA)

    Science.gov (United States)

    Zgonnik, Viacheslav; Beaumont, Valérie; Deville, Eric; Larin, Nikolay; Pillot, Daniel; Farrell, Kathleen M.

    2015-12-01

    A study of soil gases was made in North Carolina (USA) in and around morphological depressions called "Carolina bays." This type of depression is observed over the Atlantic coastal plains of the USA, but their origin remains debated. Significant concentrations of molecular hydrogen (H2) were detected, notably around the bays. These measurements suggest that Carolina bays are the surficial expression of fluid flow pathways for hydrogen gas moving from depth to the surface. The potential mechanisms of H2 production and transport and the geological controls on the fluid migration pathways are discussed, with reference to the hypothesis that Carolina bays are the result of local collapses caused by the alteration of rock along the deep pathways of H2 migrating towards the surface. The present H2 seepages are comparable to those in similar structures previously observed in the East European craton.

  1. CITIZEN SCIENTISTS MONITOR A DEADLY FUNGUS THREATENING AMPHIBIAN COMMUNITIES IN NORTHERN COASTAL CALIFORNIA, USA.

    Science.gov (United States)

    Group, Ecoclub Amphibian; Pope, Karen L; Wengert, Greta M; Foley, Janet E; Ashton, Donald T; Botzler, Richard G

    2016-07-01

    Ecoclub youth and supervising family members conducted citizen science to assess regional prevalence and distribution of Batrachochytrium dendrobatidis (Bd) among amphibians at Humboldt Bay National Wildlife Refuge (Refuge) and Redwood National and State Parks (Parks), Humboldt County, California, US, May 2013 through December 2014. Using quantitative real-time PCR, 26 (17%) of 155 samples were positive for Bd. Positive samples occurred in four frog and toad species: foothill yellow-legged frog ( Rana boylii ), northern red-legged frog ( Rana aurora ), Pacific chorus frog ( Pseudacris regilla ), and western toad (Anaxyrus [Bufo] boreas); no salamanders or anuran larvae were positive. Except for R. aurora , all infected anurans were first-time species reports for coastal northern California. At the Refuge, significantly fewer (6/71) postmetamorphic amphibians were positive compared to the Parks (20/69; P=0.0018). We assessed the association of being PCR-positive for Bd, season of sampling, and age of sampler (child, teen, or adult). The full model with season, species, and sampler age had the greatest support. Frogs tested in winter or spring were more likely to be positive than those tested in summer or fall; foothill yellow-legged frogs, northern red-legged frogs, and western toads were more likely to be positive than were Pacific chorus frogs; and the probability of being positive nearly doubled when a child (≤12 yr old) collected the sample compared to a teen or adult. Our results support other chytrid studies that found amphibians are more susceptible to Bd when temperatures are cool and that species differ in their susceptibility. The Ecoclub's findings provide new information important to conservation of northern California's coastal amphibians and demonstrate the value of involving children in citizen science. PMID:27195681

  2. Tick-borne Relapsing Fever and Borrelia hermsii, Los Angeles County, California, USA

    Science.gov (United States)

    Raffel, Sandra J.; Schrumpf, Merry E.; Webster, Larry S.; Marques, Adriana R.; Spano, Robyn; Rood, Michael; Burns, Joe; Hu, Renjie

    2009-01-01

    The primary cause of tick-borne relapsing fever in western North America is Borrelia hermsii, a rodent-associated spirochete transmitted by the fast-feeding soft tick Ornithodoros hermsi. We describe a patient who had an illness consistent with relapsing fever after exposure in the mountains near Los Angeles, California, USA. The patient’s convalescent-phase serum was seropositive for B. hermsii but negative for several other vector-borne bacterial pathogens. Investigations at the exposure site showed the presence of O. hermsi ticks infected with B. hermsii and the presence of rodents that were seropositive for the spirochete. We determined that this tick-borne disease is endemic to the San Gabriel Mountains near the greater Los Angeles metropolitan area. PMID:19624916

  3. Multi-scale responses of scattering layers to environmental variability in Monterey Bay, California

    Science.gov (United States)

    Urmy, Samuel S.; Horne, John K.

    2016-07-01

    A 38 kHz upward-facing echosounder was deployed on the seafloor at a depth of 875 m in Monterey Bay, CA, USA (36° 42.748‧N, 122° 11.214‧W) from 27 February 2009 to 18 August 2010. This 18-month record of acoustic backscatter was compared to oceanographic time series from a nearby data buoy to investigate the responses of animals in sound-scattering layers to oceanic variability at seasonal and sub-seasonal time scales. Pelagic animals, as measured by acoustic backscatter, moved higher in the water column and decreased in abundance during spring upwelling, attributed to avoidance of a shoaling oxycline and advection offshore. Seasonal changes were most evident in a non-migrating scattering layer near 500 m depth that disappeared in spring and reappeared in summer, building to a seasonal maximum in fall. At sub-seasonal time scales, similar responses were observed after individual upwelling events, though they were much weaker than the seasonal relationship. Correlations of acoustic backscatter with oceanographic variability also differed with depth. Backscatter in the upper water column decreased immediately following upwelling, then increased approximately 20 days later. Similar correlations existed deeper in the water column, but at increasing lags, suggesting that near-surface productivity propagated down the water column at 10-15 m d-1, consistent with sinking speeds of marine snow measured in Monterey Bay. Sub-seasonal variability in backscatter was best correlated with sea-surface height, suggesting that passive physical transport was most important at these time scales.

  4. Sediment distribution and transport along a rocky, embayed coast: Monterey Peninsula and Carmel Bay, California

    Science.gov (United States)

    Storlazzi, C.D.; Field, M.E.

    2000-01-01

    Field measurements of beach morphology and sedimentology were made along the Monterey Peninsula and Carmel Bay, California, in the spring and summer of 1997. These data were combined with low-altitude aerial imagery, high-resolution bathymetry, and local geology to understand how coastal geomorphology, lithology, and tectonics influence the distribution and transport of littoral sediment in the nearshore and inner shelf along a rocky shoreline over the course of decades. Three primary modes of sediment distribution in the nearshore and on the inner shelf off the Monterey Peninsula and in Carmel Bay were observed. Along stretches of the study area that were exposed to the dominant wave direction, sediment has accumulated in shore-normal bathymetric lows interpreted to be paleo-stream channels. Where the coastline is oriented parallel to the dominant wave direction and streams channels trend perpendicular to the coast, sediment-filled paleo-stream channels occur in the nearshore as well, but here they are connected to one another by shore-parallel ribbons of sediment at depths between 2 and 6 m. Where the coastline is oriented parallel to the dominant wave direction and onshore stream channels are not present, only shore-parallel patches of sediment at depths greater than 15 m are present. We interpret the distribution and interaction or transport of littoral sediment between pocket beaches along this coastline to be primarily controlled by the northwest-trending structure of the region and the dominant oceanographic regime. Because of the structural barriers to littoral transport, peaks in wave energy appear to be the dominant factor controlling the timing and magnitude of sediment transport between pocket beaches, more so than along long linear coasts. Accordingly, the magnitude and timing of sediment transport is dictated by the episodic nature of storm activity. (C) 2000 Elsevier Science B.V.

  5. Application of environmental groundwater tracers at the Sulphur Bank Mercury Mine, California, USA

    Science.gov (United States)

    Engle, Mark A.; Goff, Fraser; Jewett, David G.; Reller, Gregory J.; Bauman, Joel B.

    2008-05-01

    Boron, chloride, sulfate, δD, δ18O, and 3H concentrations in surface water and groundwater samples from the Sulphur Bank Mercury Mine (SBMM), California, USA were used to examine geochemical processes and provide constraints on evaporation and groundwater flow. SBMM is an abandoned sulfur and mercury mine with an underlying hydrothermal system, adjacent to Clear Lake, California. Results for non-3H tracers (i.e., boron, chloride, sulfate, δD, and δ18O) identify contributions from six water types at SBMM. Processes including evaporation, mixing, hydrothermal water input and possible isotopic exchange with hydrothermal gases are also discerned. Tritium data indicate that hydrothermal waters and other deep groundwaters are likely pre-bomb (before ~1952) in age while most other waters were recharged after ~1990. A boron-based steady-state reservoir model of the Herman Impoundment pit lake indicates that 71-79% of its input is from meteoric water with the remainder from hydrothermal contributions. Results for groundwater samples from six shallow wells over a 6-month period for δD and δ18O suggests that water from Herman Impoundment is diluted another 3% to more than 40% by infiltrating meteoric water, as it leaves the site. Results for this investigation show that environmental tracers are an effective tool to understand the SBMM hydrogeologic regime.

  6. Irrigation runoff insecticide pollution of rivers in the Imperial Valley, California (USA)

    Energy Technology Data Exchange (ETDEWEB)

    Vlaming, V. de [Aquatic Toxicology Laboratory, VM: APC, 1321 Haring Hall, University of California, Davis, CA 95616 (United States)]. E-mail: vldevlaming@ucdavis.edu; DiGiorgio, C. [Department of Water Resources, P.O. Box 942836, Sacramento, CA 94236 (United States); Fong, S. [Aquatic Toxicology Laboratory, VM: APC, 1321 Haring Hall, University of California, Davis, CA 95616 (United States); Deanovic, L.A. [Aquatic Toxicology Laboratory, VM: APC, 1321 Haring Hall, University of California, Davis, CA 95616 (United States); Paz Carpio-Obeso, M. de la [Colorado River Basin Region Water Quality Control Board, 73-720 Fred Waring Drive, Suite 100, Palm Desert, CA 92260 (United States); Miller, J.L. [AQUA-Science, 17 Arboretum Drive, Davis, CA 95616 (United States); Miller, M.J. [AQUA-Science, 17 Arboretum Drive, Davis, CA 95616 (United States); Richard, N.J. [Division of Water Quality, State Water Resources Control Board, 1001 I Street, Sacramento, CA 95814 (United States)

    2004-11-01

    The Alamo and New Rivers located in the Imperial Valley, California receive large volumes of irrigation runoff and discharge into the ecologically sensitive Salton Sea. Between 1993 and 2002 we conducted a series of studies to assess water quality using three aquatic species: a cladoceran (Ceriodaphnia dubia), a mysid (Neomysis mercedis), and a larval fish (Pimephales promelas). Although no mortality was observed with the P. promelas, high-level toxicity to the invertebrate species was documented in samples from both rivers during many months of each year. Toxicity identifications and chemical analyses identified the organophosphorus insecticides (OP), chlorpyrifos and diazinon, as the cause of C. dubia toxicity. The extent of the C. dubia mortality was highly correlated with quantities of these OPs applied in the river watersheds. C. dubia mortality occurred during more months of our 2001/2002 study than in the 1990s investigations. During 2001/2002, the extensive C. dubia mortality observed in New River samples was caused by OP insecticide pollution that originated from Mexico. Mortality to N. mercedis in New River samples was likely caused by contaminants other than OP insecticides. Our studies document OP insecticide-caused pollution of the Alamo River over a 10-year period and provide the necessary information for remediation efforts. - Capsule: Organophosphorous insecticides in runoff water from the USA and Mexico have impacted rivers in the Imperial Valley, California.

  7. Application of environmental groundwater tracers at the Sulphur Bank Mercury Mine, California, USA

    Science.gov (United States)

    Engle, M.A.; Goff, F.; Jewett, D.G.; Reller, G.J.; Bauman, J.B.

    2008-01-01

    Boron, chloride, sulfate, ??D, ??18O, and 3H concentrations in surface water and groundwater samples from the Sulphur Bank Mercury Mine (SBMM), California, USA were used to examine geochemical processes and provide constraints on evaporation and groundwater flow. SBMM is an abandoned sulfur and mercury mine with an underlying hydrothermal system, adjacent to Clear Lake, California. Results for non-3H tracers (i.e., boron, chloride, sulfate, ??D, and ??18O) identify contributions from six water types at SBMM. Processes including evaporation, mixing, hydrothermal water input and possible isotopic exchange with hydrothermal gases are also discerned. Tritium data indicate that hydrothermal waters and other deep groundwaters are likely pre-bomb (before ???1952) in age while most other waters were recharged after ???1990. A boron-based steady-state reservoir model of the Herman Impoundment pit lake indicates that 71-79% of its input is from meteoric water with the remainder from hydrothermal contributions. Results for groundwater samples from six shallow wells over a 6-month period for ??D and ??18O suggests that water from Herman Impoundment is diluted another 3% to more than 40% by infiltrating meteoric water, as it leaves the site. Results for this investigation show that environmental tracers are an effective tool to understand the SBMM hydrogeologic regime. ?? Springer-Verlag 2007.

  8. Irrigation runoff insecticide pollution of rivers in the Imperial Valley, California (USA)

    International Nuclear Information System (INIS)

    The Alamo and New Rivers located in the Imperial Valley, California receive large volumes of irrigation runoff and discharge into the ecologically sensitive Salton Sea. Between 1993 and 2002 we conducted a series of studies to assess water quality using three aquatic species: a cladoceran (Ceriodaphnia dubia), a mysid (Neomysis mercedis), and a larval fish (Pimephales promelas). Although no mortality was observed with the P. promelas, high-level toxicity to the invertebrate species was documented in samples from both rivers during many months of each year. Toxicity identifications and chemical analyses identified the organophosphorus insecticides (OP), chlorpyrifos and diazinon, as the cause of C. dubia toxicity. The extent of the C. dubia mortality was highly correlated with quantities of these OPs applied in the river watersheds. C. dubia mortality occurred during more months of our 2001/2002 study than in the 1990s investigations. During 2001/2002, the extensive C. dubia mortality observed in New River samples was caused by OP insecticide pollution that originated from Mexico. Mortality to N. mercedis in New River samples was likely caused by contaminants other than OP insecticides. Our studies document OP insecticide-caused pollution of the Alamo River over a 10-year period and provide the necessary information for remediation efforts. - Capsule: Organophosphorous insecticides in runoff water from the USA and Mexico have impacted rivers in the Imperial Valley, California

  9. ABUNDANCE AND DISTRIBUTION OF INDIGENOUS, NONINDIGENOUS, AND CRYPTOGENIC BENTHIC MACROFAUNA IN WILLAPA BAY, WASHINGTON, USA

    Science.gov (United States)

    Benthic macrofaunal samples were collected in Willapa Bay, WA, in four habitats [eelgrass (Zostera marina), Atlantic cordgrass (Spartina alterniflora), mud shrimp (Upogebia pugettensis), ghost shrimp (Neotrypaea californiensis)] in 1996 and in seven habitats (Zostera, Spartina, U...

  10. Guide to the littoral zone vascular flora of Carolina bay lakes (U.S.A.)

    Science.gov (United States)

    Howell, Nathan; Braham, Richard R

    2016-01-01

    Abstract Background Carolina bays are elliptic, directionally aligned basins of disputed origin that occur on the Atlantic Coastal Plain from the Delmarva Peninsula to southern Georgia. In southeastern North Carolina, several large, natural, lacustrine systems (i.e., Carolina bay lakes) exist within the geomorphological features known as Carolina bays. Within the current distribution of Carolina bays, Bladen and Columbus counties (North Carolina) contain the only known examples of Carolina bay lakes. The Carolina bay lakes can be split into two major divisions, the “Bladen Lakes Group” which is characterized as being relatively unproductive (dystrophic – oligotrophic), and Lake Waccamaw, which stands alone in Columbus County and is known for its high productivity and species richness. Although there have been several studies conducted on these unique lentic systems, none have documented the flora comprehensively. New information Over the 2013−2014 growing seasons, the littoral zone flora of Carolina bay lakes was surveyed and vouchered. Literature reviews and herbarium crawls complemented this fieldwork to produce an inventory of the vascular plant species. This survey detected 205 taxa (species/subspecies and varieties) in 136 genera and 80 vascular plant families. Thirty-one species (15.2%) are of conservation concern. Lake Waccamaw exhibited the highest species richness with 145 catalogued taxa and 26 species of conservation concern. Across all sites, the Cyperaceae (25 spp.), Poaceae (21 spp.), Asteraceae (13 spp.), Ericaceae (8 spp.), Juncaceae (8 spp.), and Lentibulariaceae (6 spp.) were the six most species-rich vascular plant families encountered. A guide to the littoral zone flora of Carolina bay lakes is presented herein, including dichotomous keys, species accounts (including abundance, habitat, phenology, and exsiccatae), as well as images of living species and vouchered specimens. PMID:27350764

  11. On Lagrangian residual currents with applications in south San Francisco Bay, California

    Science.gov (United States)

    Cheng, Ralph T.; Casulli, Vincenzo

    1982-01-01

    The Lagrangian residual circulation has often been introduced as the sum of the Eulerian residual circulation and the Stokes' drift. Unfortunately, this definition of the Lagrangian residual circulation is conceptually incorrect because both the Eulerian residual circulation and the Stokes' drift are Eulerian variables. In this paper a classification of various residual variables are reviewed and properly defined. The Lagrangian residual circulation is then studied by means of a two-stage formulation of a computer model. The tidal circulation is first computed in a conventional Eulerian way, and then the Lagrangian residual circulation is determined by a method patterned after the method of markers and cells. To demonstrate properties of the Lagrangian residual circulation, application of this approach in South San Francisco Bay, California, is considered. With the aid of the model results, properties of the Eulerian and Lagrangian residual circulation are examined. It can be concluded that estimation of the Lagrangian residual circulation from Eulerian data may lead to unacceptable error, particularly in a tidal estuary where the tidal excursion is of the same order of magnitude as the length scale of the basin. A direction calculation of the Lagrangian residual circulation must be made and has been shown to be feasible.

  12. Perfluoroalkyl compounds in relation to life-history and reproductive parameters in bottlenose dolphins (Tursiops truncatus) from Sarasota Bay, Florida, USA

    NARCIS (Netherlands)

    Houde, M.; Balmer, B.C.; Brandsma, S.H.; Wells, R.S.; Rowles, T.K.; Solomon, K.R.; Muir, D.C.G.

    2006-01-01

    Perfluoroalkyl compounds (PFCs) were determined in plasma, milk, and urine of free-ranging bottlenose dolphins (Tursiops truncatus) from Sarasota Bay (FL, USA) during three winter and two summer capture-and-release programs (2002¿ 2005). Plasma and urine samples were extracted using an ion-pairing m

  13. Observations and Impacts from the 2010 Chilean and 2011 Japanese Tsunamis in California (USA)

    Science.gov (United States)

    Wilson, Rick I.; Admire, Amanda R.; Borrero, Jose C.; Dengler, Lori A.; Legg, Mark R.; Lynett, Patrick; McCrink, Timothy P.; Miller, Kevin M.; Ritchie, Andy; Sterling, Kara; Whitmore, Paul M.

    2013-06-01

    The coast of California was significantly impacted by two recent teletsunami events, one originating off the coast of Chile on February 27, 2010 and the other off Japan on March 11, 2011. These tsunamis caused extensive inundation and damage along the coast of their respective source regions. For the 2010 tsunami, the NOAA West Coast/Alaska Tsunami Warning Center issued a state-wide Tsunami Advisory based on forecasted tsunami amplitudes ranging from 0.18 to 1.43 m with the highest amplitudes predicted for central and southern California. For the 2011 tsunami, a Tsunami Warning was issued north of Point Conception and a Tsunami Advisory south of that location, with forecasted amplitudes ranging from 0.3 to 2.5 m, the highest expected for Crescent City. Because both teletsunamis arrived during low tide, the potential for significant inundation of dry land was greatly reduced during both events. However, both events created rapid water-level fluctuations and strong currents within harbors and along beaches, causing extensive damage in a number of harbors and challenging emergency managers in coastal jurisdictions. Field personnel were deployed prior to each tsunami to observe and measure physical effects at the coast. Post-event survey teams and questionnaires were used to gather information from both a physical effects and emergency response perspective. During the 2010 tsunami, a maximum tsunami amplitude of 1.2 m was observed at Pismo Beach, and over 3-million worth of damage to boats and docks occurred in nearly a dozen harbors, most significantly in Santa Cruz, Ventura, Mission Bay, and northern Shelter Island in San Diego Bay. During the 2011 tsunami, the maximum amplitude was measured at 2.47 m in Crescent City Harbor with over 50-million in damage to two dozen harbors. Those most significantly affected were Crescent City, Noyo River, Santa Cruz, Moss Landing, and southern Shelter Island. During both events, people on docks and near the ocean became at risk to

  14. Accumulation of current-use and organochlorine pesticides in crab embryos from Northern California, USA

    Science.gov (United States)

    Smalling, Kelly L.; Morgan, Steven; Kuivila, Kathryn K.

    2010-01-01

    Invertebrates have long been used as resident sentinels for assessing ecosystem health and productivity. The shore crabs, Hemigrapsus oregonensis and Pachygrapsus crassipes, are abundant in estuaries and beaches throughout northern California, USA and have been used as indicators of habitat conditions in several salt marshes. The overall objectives of the present study were to conduct a lab-based study to test the accumulation of current-use pesticides, validate the analytical method and to analyze field-collected crabs for a suite of 74 current-use and legacy pesticides. A simple laboratory uptake study was designed to determine if embryos could bioconcentrate the herbicide molinate over a 7-d period. At the end of the experiment, embryos were removed from the crabs and analyzed by gas chromatography/mass spectrometry. Although relatively hydrophilic (log KOW of 2.9), molinate did accumulate with an estimated bioconcentration factor (log BCF) of approximately 2.5. Following method validation, embryos were collected from two different Northern California salt marshes and analyzed. In field-collected embryos 18 current-use and eight organochlorine pesticides were detected including synthetic pyrethroids and organophosphate insecticides, as well as DDT and its degradates. Lipid-normalized concentrations of the pesticides detected in the field-collected crab embryos ranged from 0.1 to 4 ppm. Pesticide concentrations and profiles in crab embryos were site specific and could be correlated to differences in land-use practices. These preliminary results indicate that embryos are an effective sink for organic contaminants in the environment and have the potential to be good indicators of ecosystem health, especially when contaminant body burden analyses are paired with reproductive impairment assays.

  15. Urban sources and emissions of nitrous oxide and methane in southern California, USA

    Science.gov (United States)

    Townsend-Small, A.; Pataki, D.; Tyler, S. C.; Czimczik, C. I.; Xu, X.; Christensen, L. E.

    2012-12-01

    Anthropogenic activities have resulted in increasing levels of greenhouse gases, including carbon dioxide, methane, and nitrous oxide. While global and regional emissions sources of carbon dioxide are relatively well understood, methane and nitrous oxide are less constrained, particularly at regional scales. Here we present the results of an investigation of sources and emissions of methane and nitrous oxide in Los Angeles, California, USA, one of Earth's largest urban areas. The original goal of the project was to determine whether isotopes are useful tracers of agricultural versus urban nitrous oxide and methane sources. For methane, we found that stable isotopes (carbon-13 and deuterium) and radiocarbon are good tracers of biogenic versus fossil fuel sources. High altitude observations of methane concentration, measured continuously using tunable laser spectroscopy, and isotope ratios, measured on discrete flask samples using mass spectrometry, indicate that the predominant methane source in Los Angeles is from fossil fuels, likely from "fugitive" emissions from geologic formations, natural gas pipelines, oil refining, or power plants. We also measured nitrous oxide emissions and isotope ratios from urban (landscaping and wastewater treatment) and agricultural sources (corn and vegetable fields). There was no difference in nitrous oxide isotope ratios between the different types of sources, although stable isotopes did differ between nitrous oxide produced in oxic and anoxic wastewater treatment tanks. Our nitrous oxide flux data indicate that landscaped turfgrass emits nitrous oxide at rates equivalent to agricultural systems, indicating that ornamental soils should not be disregarded in regional nitrous oxide budgets. However, we also showed that wastewater treatment is a much greater source of nitrous oxide than soils regionally. This work shows that global nitrous oxide and methane budgets are not easily downscaled to regional, urban settings, which has

  16. International Center for Arid Land Ecology was established by Xinjiang Institute of Ecology and Geography,CAS and University of California,Riverside,USA

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Invited by Xinjiang Institute of Ecology and Geography, Professor Charles Lois, the vice chancellor of University of California, Riverside, USA, with his colleagues, visited the Institute and went to National Fukang Ecosystem

  17. Occurrence patterns of Black-backed Woodpeckers in green forest of the Sierra Nevada Mountains, California, USA.

    OpenAIRE

    Alissa M. Fogg; L. Jay. Roberts; Burnett, Ryan D.

    2014-01-01

    Black-backed Woodpeckers (Picoides arcticus) are a rare habitat specialist typically found in moderate and high severity burned forest throughout its range. It also inhabits green forest but little is known about occurrence and habitat use patterns outside of burned areas, especially in the Sierra Nevada of California, USA. We used point count and playback surveys to detect Black-backed Woodpeckers during 2011 - 2013 on 460 transects on 10 national forest units. We defined green forest as are...

  18. Application of the Hyperspectral Imager for the Coastal Ocean to Phytoplankton Ecology Studies in Monterey Bay, CA, USA

    Directory of Open Access Journals (Sweden)

    John P. Ryan

    2014-01-01

    Full Text Available As a demonstrator for technologies for the next generation of ocean color sensors, the Hyperspectral Imager for the Coastal Ocean (HICO provides enhanced spatial and spectral resolution that is required to understand optically complex aquatic environments. In this study we apply HICO, along with satellite remote sensing and in situ observations, to studies of phytoplankton ecology in a dynamic coastal upwelling environment—Monterey Bay, CA, USA. From a spring 2011 study, we examine HICO-detected spatial patterns in phytoplankton optical properties along an environmental gradient defined by upwelling flow patterns and along a temporal gradient of upwelling intensification. From a fall 2011 study, we use HICO’s enhanced spatial and spectral resolution to distinguish a small-scale “red tide” bloom, and we examine bloom expansion and its supporting processes using other remote sensing and in situ data. From a spectacular HICO image of the Monterey Bay region acquired during fall of 2012, we present a suite of algorithm results for characterization of phytoplankton, and we examine the strengths, limitations, and distinctions of each algorithm in the context of the enhanced spatial and spectral resolution.

  19. [Experiences of undocumented Mexican migrant women when accessing sexual and reproductive health services in California, USA: a case study].

    Science.gov (United States)

    Deeb-Sossa, Natalia; Díaz Olavarrieta, Claudia; Juárez-Ramírez, Clara; García, Sandra G; Villalobos, Aremis

    2013-05-01

    This study focuses on the experience of Mexican women migrants in California, USA, with the use of formal health services for sexual and reproductive health issues. The authors used a qualitative interpretative approach with life histories, interviewing eight female users of healthcare services in California and seven key informants in Mexico and California. There were three main types of barriers to healthcare: immigration status, language, and gender. Participants reported long waiting times, discriminatory attitudes, and high cost of services. A combination of formal and informal healthcare services was common. The assessment of quality of care was closely related to undocumented immigration status. Social support networks are crucial to help solve healthcare issues. Quality of care should take intercultural health issues into account. PMID:23703003

  20. Modeling the effect of hypoxia on macrobenthos production in the lower Rappahannock River, Chesapeake Bay, USA.

    Directory of Open Access Journals (Sweden)

    Samuel Kersey Sturdivant

    Full Text Available Hypoxia in Chesapeake Bay has substantially increased in recent decades, with detrimental effects on macrobenthic production; the production of these fauna link energy transfer from primary consumers to epibenthic and demersal predators. As such, the development of accurate predictive models that determine the impact of hypoxia on macrobenthic production is important. A continuous-time, biomass-based model was developed for the lower Rappahannock River, a Bay tributary prone to seasonal hypoxia. Phytoplankton, zooplankton, and macrobenthic state variables were modeled, with a focus on quantitatively constraining the effect of hypoxia on macrobenthic biomass. This was accomplished through regression with Z': a sigmoidal function between macrobenthic biomass and dissolved oxygen concentration, derived using macrobenthic data collected from the Rappahannock River during the summers of 2007 and 2008, and applied to compute hypoxia-induced mortality as a rate process. The model was verified using independent monitoring data collected by the Chesapeake Bay Program. Simulations showed that macrobenthic biomass was strongly linked to dissolved oxygen concentrations, with fluctuations in biomass related to the duration and severity of hypoxia. Our model demonstrated that hypoxia negatively affected macrobenthic biomass, as longer durations of hypoxia and greater hypoxic severity resulted in an increasing loss in biomass. This exercise represents an important contribution to modeling anthropogenically impacted coastal ecosystems, by providing an empirically constrained relationship between hypoxia and macrobenthic biomass, and applying that empirical relationship in a mechanistic model to quantify the effect of the severity, duration, and frequency of hypoxia on benthic biomass dynamics.

  1. Modeling the effect of hypoxia on macrobenthos production in the lower Rappahannock River, Chesapeake Bay, USA.

    Science.gov (United States)

    Sturdivant, Samuel Kersey; Brush, Mark J; Diaz, Robert J

    2013-01-01

    Hypoxia in Chesapeake Bay has substantially increased in recent decades, with detrimental effects on macrobenthic production; the production of these fauna link energy transfer from primary consumers to epibenthic and demersal predators. As such, the development of accurate predictive models that determine the impact of hypoxia on macrobenthic production is important. A continuous-time, biomass-based model was developed for the lower Rappahannock River, a Bay tributary prone to seasonal hypoxia. Phytoplankton, zooplankton, and macrobenthic state variables were modeled, with a focus on quantitatively constraining the effect of hypoxia on macrobenthic biomass. This was accomplished through regression with Z': a sigmoidal function between macrobenthic biomass and dissolved oxygen concentration, derived using macrobenthic data collected from the Rappahannock River during the summers of 2007 and 2008, and applied to compute hypoxia-induced mortality as a rate process. The model was verified using independent monitoring data collected by the Chesapeake Bay Program. Simulations showed that macrobenthic biomass was strongly linked to dissolved oxygen concentrations, with fluctuations in biomass related to the duration and severity of hypoxia. Our model demonstrated that hypoxia negatively affected macrobenthic biomass, as longer durations of hypoxia and greater hypoxic severity resulted in an increasing loss in biomass. This exercise represents an important contribution to modeling anthropogenically impacted coastal ecosystems, by providing an empirically constrained relationship between hypoxia and macrobenthic biomass, and applying that empirical relationship in a mechanistic model to quantify the effect of the severity, duration, and frequency of hypoxia on benthic biomass dynamics. PMID:24391904

  2. Improving lakebed sediment quality in an urban estuary, Presque Isle Bay, Lake Erie, USA

    Science.gov (United States)

    Foyle, A. M.; Norton, K. P.

    2007-12-01

    Presque Isle Bay, Lake Erie, is a microtidal freshwater estuary on the North American Great Lakes. It is one of 40 remaining environmental Areas of Concern (AoCs) on the Great Lakes that have one or more water, habitat, or sediment quality impairments as defined by the International Joint Commission. In-situ natural capping using sediment from to-be-remediated watersheds and other sources is being considered as the most feasible means of remediating contaminated sediments in the estuary. A multi-decade sediment budget shows that, when localized anthropogenic effects are accounted for, the estuary net-accumulated sediment over time from three major sources: the Lake Erie littoral system (20%), streams (25%), and bank erosion and bluff recession (41%). The non-stream sources supply environmentally clean sediment from ancient coastal deposits along the shoreline, and from the modern littoral system. However, organic and metallic contaminants are supplied by streams and run-off and remain a remediation challenge. From a geological perspective, natural capping of contaminated sediment over the next several decades is a viable solution for the majority of the bay. The mechanism may not work effectively in all areas because approximately 25% of the bay floor is moderately net- erosional or accumulates sediments very slowly.

  3. Integrated assessment of the impacts of agricultural drainwater in the Salinas River (California, USA)

    Energy Technology Data Exchange (ETDEWEB)

    Anderson, B.S.; Hunt, J.W.; Phillips, B.M.; Nicely, P.A.; Vlaming, V. de; Connor, V.; Richard, N.; Tjeerdema, R.S

    2003-08-01

    Invertebrate mortality was correlated with levels of water and sediment contaminatioin in the Salinas River. - The Salinas River is the largest of the three rivers that drain into the Monterey Bay National Marine Sanctuary in central California. Large areas of this watershed are cultivated year-round in row crops and previous laboratory studies have demonstrated that acute toxicity of agricultural drainwater to Ceriodaphnia dubia is caused by the organophosphate (OP) pesticides chlorpyrifos and diazinon. In the current study, we used a combination of ecotoxicologic tools to investigate incidence of chemical contamination and toxicity in waters and sediments in the river downstream of a previously uncharacterized agricultural drainage creek system. Water column toxicity was investigated using a cladoceran C. dubia while sediment toxicity was investigated using an amphipod Hyalella azteca. Ecological impacts of drainwater were investigated using bioassessments of macroinvertebrate community structure. The results indicated that Salinas River water downstream of the agricultural drain is acutely toxic to Ceriodaphnia, and toxicity to this species was highly correlated with combined toxic units (TUs) of chlorpyrifos and diazinon. Laboratory tests were used to demonstrate that sediments in this system were acutely toxic to H. azteca, which is a resident genus. Macroinvertebrate community structure was moderately impacted downstream of the agricultural drain input. While the lowest macroinvertebrate abundances were measured at the station demonstrating the greatest water column and sediment toxicity and the highest concentrations of pesticides, macroinvertebrate metrics were more significantly correlated with bank vegetation cover than any other variable. Results of this study suggest that pesticide pollution is the likely cause of laboratory-measured toxicity in the Salinas River samples and that this factor may interact with other factors to impact the

  4. Integrated assessment of the impacts of agricultural drainwater in the Salinas River (California, USA)

    International Nuclear Information System (INIS)

    Invertebrate mortality was correlated with levels of water and sediment contaminatioin in the Salinas River. - The Salinas River is the largest of the three rivers that drain into the Monterey Bay National Marine Sanctuary in central California. Large areas of this watershed are cultivated year-round in row crops and previous laboratory studies have demonstrated that acute toxicity of agricultural drainwater to Ceriodaphnia dubia is caused by the organophosphate (OP) pesticides chlorpyrifos and diazinon. In the current study, we used a combination of ecotoxicologic tools to investigate incidence of chemical contamination and toxicity in waters and sediments in the river downstream of a previously uncharacterized agricultural drainage creek system. Water column toxicity was investigated using a cladoceran C. dubia while sediment toxicity was investigated using an amphipod Hyalella azteca. Ecological impacts of drainwater were investigated using bioassessments of macroinvertebrate community structure. The results indicated that Salinas River water downstream of the agricultural drain is acutely toxic to Ceriodaphnia, and toxicity to this species was highly correlated with combined toxic units (TUs) of chlorpyrifos and diazinon. Laboratory tests were used to demonstrate that sediments in this system were acutely toxic to H. azteca, which is a resident genus. Macroinvertebrate community structure was moderately impacted downstream of the agricultural drain input. While the lowest macroinvertebrate abundances were measured at the station demonstrating the greatest water column and sediment toxicity and the highest concentrations of pesticides, macroinvertebrate metrics were more significantly correlated with bank vegetation cover than any other variable. Results of this study suggest that pesticide pollution is the likely cause of laboratory-measured toxicity in the Salinas River samples and that this factor may interact with other factors to impact the

  5. Fecal indicator bacteria and Salmonella in ponds managed as bird habitat, San Francisco Bay, California, USA

    Science.gov (United States)

    Shellenbarger, G.G.; Athearn, N.D.; Takekawa, J.Y.; Boehm, A.B.

    2008-01-01

    Throughout the world, coastal resource managers are encouraging the restoration of previously modified coastal habitats back into wetlands and managed ponds for their ecosystem value. Because many coastal wetlands are adjacent to urban centers and waters used for human recreation, it is important to understand how wildlife can affect water quality. We measured fecal indicator bacteria (FIB) concentrations, presence/absence of Salmonella, bird abundance, and physico-chemical parameters in two coastal, managed ponds and adjacent sloughs for 4 weeks during the summer and winter in 2006. We characterized the microbial water quality in these waters relative to state water-quality standards and examined the relationship between FIB, bird abundance, and physico-chemical parameters. A box model approach was utilized to determine the net source or sink of FIB in the ponds during the study periods. FIB concentrations often exceeded state standards, particularly in the summer, and microbial water quality in the sloughs was generally lower than in ponds during both seasons. Specifically, the inflow of water from the sloughs to the ponds during the summer, more so than waterfowl use, appeared to increase the FIB concentrations in the ponds. The box model results suggested that the ponds served as net wetland sources and sinks for FIB, and high bird abundances in the winter likely contributed to net winter source terms for two of the three FIB in both ponds. Eight serovars of the human pathogen Salmonella were isolated from slough and pond waters, although the source of the pathogen to these wetlands was not identified. Thus, it appeared that factors other than bird abundance were most important in modulating FIB concentrations in these ponds.

  6. Health, disease, mortality and survival in wild and rehabilitated harbor seals (Phoca vitulina) in San Francisco Bay and along the central California coast

    OpenAIRE

    Greig, Denise J.

    2011-01-01

    Conventional methods for health assessment of wild-caught and stranded seals were used to describe the disease status of harbor seals in California. Clinical chemistry, infectious disease prevalence, immune function, and contaminant data were collected to evaluate harbor seal health with data collected from three groups of seals. Wild-caught seals of all ages were sampled at two locations: San Francisco Bay (a heavily urbanized estuary) and Tomales Bay (a less developed control site). Strande...

  7. California State Waters Map Series--Offshore of Half Moon Bay Web Services

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of...

  8. California State Waters Map Series--Salt Point to Drakes Bay Web Services

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of...

  9. California State Waters Map Series--Pigeon Point to South Monterey Bay Web Services

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of...

  10. Calibration of numerical models for small debris flows in Yosemite Valley, California, USA

    Directory of Open Access Journals (Sweden)

    P. Bertolo

    2005-01-01

    Full Text Available This study compares documented debris flow runout distances with numerical simulations in the Yosemite Valley of California, USA, where about 15% of historical events of slope instability can be classified as debris flows and debris slides (Wieczorek and Snyder, 2004. To model debris flows in the Yosemite Valley, we selected six streams with evidence of historical debris flows; three of the debris flow deposits have single channels, and the other three split their pattern in the fan area into two or more channels. From field observations all of the debris flows involved coarse material, with only very small clay content. We applied the one dimensional DAN (Dynamic ANalysis model (Hungr, 1995 and the two-dimensional FLO-2D model (O'Brien et al., 1993 to predict and compare the runout distance and the velocity of the debris flows observed in the study area. As a first step, we calibrated the parameters for the two softwares through the back analysis of three debris- flows channels using a trial-and-error procedure starting with values suggested in the literature. In the second step we applied the selected values to the other channels, in order to evaluate their predictive capabilities. After parameter calibration using three debris flows we obtained results similar to field observations We also obtained a good agreement between the two models for velocities. Both models are strongly influenced by topography: we used the 30 m cell size DTM available for the study area, that is probably not accurate enough for a highly detailed analysis, but it can be sufficient for a first screening.

  11. Water availability and land subsidence in the Central Valley, California, USA

    Science.gov (United States)

    Faunt, Claudia C.; Sneed, Michelle; Traum, Jon; Brandt, Justin T.

    2016-05-01

    The Central Valley in California (USA) covers about 52,000 km2 and is one of the most productive agricultural regions in the world. This agriculture relies heavily on surface-water diversions and groundwater pumpage to meet irrigation water demand. Because the valley is semi-arid and surface-water availability varies substantially, agriculture relies heavily on local groundwater. In the southern two thirds of the valley, the San Joaquin Valley, historic and recent groundwater pumpage has caused significant and extensive drawdowns, aquifer-system compaction and subsidence. During recent drought periods (2007-2009 and 2012-present), groundwater pumping has increased owing to a combination of decreased surface-water availability and land-use changes. Declining groundwater levels, approaching or surpassing historical low levels, have caused accelerated and renewed compaction and subsidence that likely is mostly permanent. The subsidence has caused operational, maintenance, and construction-design problems for water-delivery and flood-control canals in the San Joaquin Valley. Planning for the effects of continued subsidence in the area is important for water agencies. As land use, managed aquifer recharge, and surface-water availability continue to vary, long-term groundwater-level and subsidence monitoring and modelling are critical to understanding the dynamics of historical and continued groundwater use resulting in additional water-level and groundwater storage declines, and associated subsidence. Modeling tools such as the Central Valley Hydrologic Model, can be used in the evaluation of management strategies to mitigate adverse impacts due to subsidence while also optimizing water availability. This knowledge will be critical for successful implementation of recent legislation aimed toward sustainable groundwater use.

  12. Multimedia screening of contaminants of emerging concern (CECS) in coastal urban watersheds in southern California (USA).

    Science.gov (United States)

    Maruya, Keith A; Dodder, Nathan G; Sengupta, Ashmita; Smith, Deborah J; Lyons, J Michael; Heil, Ann T; Drewes, Jörg E

    2016-08-01

    To examine the occurrence and fate of contaminants of emerging concern (CECs) and inform future monitoring of CECs in coastal urban waterways, water, sediment, and fish tissue samples were collected and analyzed for a broad suite of pharmaceuticals and personal care products (PPCPs), commercial and/or household chemicals, current use pesticides, and hormones in an effluent-dominated river and multiple embayments in southern California (USA). In the Santa Clara River, which receives treated wastewater from several facilities, aqueous phase CECs were detectable at stations nearest discharges from municipal wastewater treatment plants but were attenuated downstream. Sucralose and the chlorinated phosphate flame retardants tris(1-chloro-2-propyl) phosphate (TCPP), tris(1,3-dichloro-2-propyl) phosphate (TDCPP), and tris(2-chloroethyl) phosphate (TCEP) were most abundant in water, with maximum concentrations of 35 μg/L, 3.3 μg/L, 1.4 μg/L, and 0.81 μg/L, respectively. Triclocarban, an antimicrobial agent in use for decades, was more prevalent in water than triclosan or nonylphenol. Maximum concentrations of bifenthrin, permethrin, polybrominated diphenyl ethers (PBDEs), and degradates of fipronil exceeded CEC-specific monitoring trigger levels recently established for freshwater and estuarine sediments by factors of 10 to 1000, respectively. Maximum fish tissue concentrations of PBDEs varied widely (370 ng/g and 7.0 ng/g for the Santa Clara River and coastal embayments, respectively), with most species exhibiting concentrations at the lower end of this range. These results suggest that continued monitoring of pyrethroids, PBDEs, and degradates of fipronil in sediment is warranted in these systems. In contrast, aqueous pharmaceutical concentrations in the Santa Clara River were not close to exceeding current monitoring trigger levels, suggesting a lower priority for targeted monitoring in this medium. Environ Toxicol Chem 2016;35:1986-1994. © 2016 SETAC

  13. Water availability and land subsidence in the Central Valley, California, USA

    Science.gov (United States)

    Faunt, Claudia C.; Sneed, Michelle; Traum, Jon; Brandt, Justin T.

    2015-11-01

    The Central Valley in California (USA) covers about 52,000 km2 and is one of the most productive agricultural regions in the world. This agriculture relies heavily on surface-water diversions and groundwater pumpage to meet irrigation water demand. Because the valley is semi-arid and surface-water availability varies substantially, agriculture relies heavily on local groundwater. In the southern two thirds of the valley, the San Joaquin Valley, historic and recent groundwater pumpage has caused significant and extensive drawdowns, aquifer-system compaction and subsidence. During recent drought periods (2007-2009 and 2012-present), groundwater pumping has increased owing to a combination of decreased surface-water availability and land-use changes. Declining groundwater levels, approaching or surpassing historical low levels, have caused accelerated and renewed compaction and subsidence that likely is mostly permanent. The subsidence has caused operational, maintenance, and construction-design problems for water-delivery and flood-control canals in the San Joaquin Valley. Planning for the effects of continued subsidence in the area is important for water agencies. As land use, managed aquifer recharge, and surface-water availability continue to vary, long-term groundwater-level and subsidence monitoring and modelling are critical to understanding the dynamics of historical and continued groundwater use resulting in additional water-level and groundwater storage declines, and associated subsidence. Modeling tools such as the Central Valley Hydrologic Model, can be used in the evaluation of management strategies to mitigate adverse impacts due to subsidence while also optimizing water availability. This knowledge will be critical for successful implementation of recent legislation aimed toward sustainable groundwater use.

  14. Toxicity of metal-contaminated sediments from Keswick Reservoir, California, USA

    Energy Technology Data Exchange (ETDEWEB)

    Finlayson, B.; Fujimura, R.; Huang, Z.Z.

    2000-02-01

    Keswick Reservoir, California, USA, receives metal-laden acid-mine drainage (AMD) from the abandoned Iron Mountain Mine. Mixing of the AMD with reservoir water causes precipitation and deposition of metal-rich sludge in the reservoir. Hydroelectric generation activities can scour the sediments and mobilize trace metals cadmium, copper, and zinc into the water column, thus creating potentially toxic conditions to fish and aquatic invertebrates. Sediment samples collected from Keswick Reservoir in 1993 and 1994 were analyzed for acid-volatile sulfides and for simultaneously extractable metals (SEM), and whole sediments and sediment elutriates were tested for toxicity to rainbow trout (Oncorhynchus mykiss), amphipods (Hyalella azteca), and cladocerans (Ceriodaphnia dubia). Acid-volatile sulfide concentrations in the sediments were low (<10 {micro}mol/g H{sub 2}S), indicating that dissolved metals in the sediment pore water were not limited by sulfide. The SEM concentrations were generally high (up to 11 {micro}g/g Cd, 4,800 {micro}g/g Cu, and 1,600 {micro}g/g Zn, dry weight) in the sediments. Whole sediments and 20% w/w sediment elutriates from 16 sites were tested for toxicity. Low survival (as low as 0{degree}) in whole sediments was generally associated with copper and zinc, and to a lesser extent cadmium, concentrations that exceeded probable effect level values for freshwater sediments; survival also may have been influenced by low pH and alkalinity conditions. Low survival (as low as 0%) in sediment elutriates was also generally associated with higher concentrations of dissolved zinc. Further study is required to formulate sediment cleanup levels that are protective of fish and wildlife. Source control in the Iron Mountain Mine drainage will eventually significantly lessen the production of sediments.

  15. Wave and Hydrodynamic Modeling for Engineering Design of Jetties at Tangier Island in Chesapeake Bay, USA

    Directory of Open Access Journals (Sweden)

    Lihwa Lin

    2015-12-01

    Full Text Available The protection of a boat canal at the western entrance of Tangier Island, Virginia, located in the lower Chesapeake Bay, is investigated using different structural alternatives. The existing entrance channel is oriented 45 deg with respect to the local shoreline, and exposed directly to the lower Bay without any protection. The adjacent shoreline has experienced progressive erosion in recent decades by flooding due to severe storms and waves. To protect the western entrance of the channel and shoreline, five different jetty and spur combinations were proposed to reduce wave energy in the lee of jetties. Environmental forces affecting the proposed jettied inlet system are quantified using the Coastal Modeling System, consisting of a spectral wave model and a depth-averaged circulation model with sediment transport calculations. Numerical simulations were conducted for design wave conditions and a 50-year return period tropical storm at the project site. Model results show a low crested jetty of 170-m length connecting to the north shore at a 45-deg angle, and a short south spur of 25-m long, provide adequate wave-reduction benefits among the five proposed alternatives. The model simulation indicates this alternative has the minimum impact on sedimentation around the structured inlet and boat canal.

  16. An Alexandrium Spp. Cyst Record from Sequim Bay, Washington State, USA, and its Relation to Past Climate Variability(1).

    Science.gov (United States)

    Feifel, Kirsten M; Moore, Stephanie K; Horner, Rita A

    2012-06-01

    Since the 1970s, Puget Sound, Washington State, USA, has experienced an increase in detections of paralytic shellfish toxins (PSTs) in shellfish due to blooms of the harmful dinoflagellate Alexandrium. Natural patterns of climate variability, such as the Pacific Decadal Oscillation (PDO), and changes in local environmental factors, such as sea surface temperature (SST) and air temperature, have been linked to the observed increase in PSTs. However, the lack of observations of PSTs in shellfish prior to the 1950s has inhibited statistical assessments of longer-term trends in climate and environmental conditions on Alexandrium blooms. After a bloom, Alexandrium cells can enter a dormant cyst stage, which settles on the seafloor and then becomes entrained into the sedimentary record. In this study, we created a record of Alexandrium spp. cysts from a sediment core obtained from Sequim Bay, Puget Sound. Cyst abundances ranged from 0 to 400 cysts · cm(-3) and were detected down-core to a depth of 100 cm, indicating that Alexandrium has been present in Sequim Bay since at least the late 1800s. The cyst record allowed us to statistically examine relationships with available environmental parameters over the past century. Local air temperature and sea surface temperature were positively and significantly correlated with cyst abundances from the late 1800s to 2005; no significant relationship was found between PDO and cyst abundances. This finding suggests that local environmental variations more strongly influence Alexandrium population dynamics in Puget Sound when compared to large-scale changes. PMID:27011070

  17. Use of digital multispectral videography to assess seagrass distribution in San Quintin Bay, Baja California, Mexico

    Science.gov (United States)

    Ward, D.H.; Tibbitts, T.L.; Morton, Alexandra; Carrera-Gonzalez, Eduardo; Kempka, R.

    2004-01-01

    Apparent threats to the spatial distribution of seagrass in San Quinti??n Bay prompted us to make a detailed assessment of habitats in the bay. Six coastal habitats and three seagrass subclasses were delineated using airborne digital multispectral videography (DMSV), Eelgrass, Zostera marina, was the predominant seagrass and covered 40% (1949 ha) of the areal extent of the bay in 1999. Eelgrass grew over a wide range of tidal depths from about -3.0 in mean lower low water (MLLW) to about 1.0 m MLLW, but greatest spatial extent occurred in intertidal areas -0.6 m to 1.0 m MLLW. Exposed-continuous (i.e., high density) eelgrass was the most abundant habitat in the bay. Widgeongrass, Ruppia maritima, was the only other seagrass present and covered 3% (136 ha) of the areal extent of the entire bay. Widgeongrass grew in single species stands in the upper intertidal (??? 0.4 MLLW) and intermixed with eelgrass at lower tidal depths. Overall accuracy of the six habitat classes and three subclasses in the DMSV map was relatively high at 84%. Our detailed map of San Quintin Bay can be used in future change detection analyses to monitor the health of seagrasses in the bay.

  18. Composition and fluxes of particulate organic matter in a temperate estuary (Winyah Bay, South Carolina, USA) under contrasting physical forcings

    Science.gov (United States)

    Goñi, Miguel A.; Voulgaris, George; Kim, Yong H.

    2009-11-01

    To understand the role that physical processes play on the biogeochemical cycles of estuaries, we conducted intense field studies of the turbidity maximum region within a partially mixed estuary (Winyah Bay, SC, USA) under contrasting conditions of river discharge, tides and wind. Water samples and hydrographic data were collected at different depths and locations along the main channel over several tidal cycles during several cruises to Winyah Bay. Tidal variations in current speed, salinity, total suspended solid concentrations were measured within each cruise and were consistent with estuarine circulation processes. Salinity and total suspended solid concentrations ranged from 0 to 32 and from 20 to over 500 mg L -1, respectively, with the highest salinity and total suspended solid values measured during periods of low river discharge. In fact, comparison of tidally averaged salinity and total suspended solid concentrations revealed marked differences among cruises that were negatively correlated to river discharge and SW wind speed. Moreover, significant contrasts in the chemical compositions of suspended particles were evident among periods of contrasting river discharge and wind regime. For example, the weight percent organic carbon content of suspended particles ranged from 1 to over 6% and displayed a positive correlation with river discharge. Similarly, both the molar carbon to nitrogen ratios (10 to 20 mol:mol) and stable carbon isotopic compositions (-25 to -29%) of the suspended organic matter varied significantly as a function of discharge and wind. Such trends indicate that in Winyah Bay low river discharge and steady SW winds promote resuspension of bed sediments from shallow regions of the estuary. These materials contain highly altered organic matter and their incorporation into the water column leads to the observed trends in suspended particle concentrations and compositions. Furthermore, these conditions result in net landward fluxes of salt

  19. Impacts of diverted freshwater on dissolved organic matter and microbial communities in Barataria Bay, Louisiana, U.S.A.

    Science.gov (United States)

    Bianchi, Thomas S; Cook, Robert L; Perdue, E Michael; Kolic, Paulina E; Green, Nelson; Zhang, Yaoling; Smith, Richard W; Kolker, Alexander S; Ameen, Alex; King, Gary; Ojwang, Loice M; Schneider, Caroline L; Normand, Anna E; Hetland, Robert

    2011-12-01

    Here we present results of an initial assessment of the impacts of a water diversion event on the concentrations and chemical composition of dissolved organic matter (DOM) and bacterioplankton community composition in Barataria Bay, Louisiana U.S.A, an important estuary within the Mississippi River Delta complex. Concentrations and spectral properties of DOM, as reflected by UV/visible absorbance and fluorescence, were strikingly similar at 26 sites sampled along transects near two western and two eastern areas of Barataria Bay in July and September 2010. In September 2010, dissolved organic carbon (DOC) was significantly higher (568.1-1043 μM C, x=755.6+/-117.7 μM C, n=14) than in July 2010 (249.1-577.1 μM C, x=383.7+/-98.31 μM C, n=14); conversely, Abs254 was consistently higher at every site in July (0.105-0.314) than in September (0.080-0.221), averaging 0.24±0.06 in July and 0.15±0.04 in September. Fluorescence data via the fluorescence index (FI450/500) revealed that only 30% (8 of 26) of the July samples had an FI450/500 above 1.36, compared to 96% (25 of 26) for the September samples. This indicates a more terrestrial origin for the July DOM. Bacterioplankton from eastern sites differed in composition from bacterioplankon in western sites in July. These differences appeared to result from reduced salinities caused by the freshwater diversion. Bacterioplankton communities in September differed from those in July, but no spatial structure was observed. Thus, the trends in bacterioplankton and DOM were likely due to changes in water masses (e.g., input of Mississippi River water in July and a return to estuarine waters in September). Discharge of water from the Davis Pond Freshwater Diversion (DPFD) through Barataria Bay may have partially mitigated some adverse effects of the oil spill, inasmuch as DOM is concerned. PMID:22000271

  20. Benthic macrofauna productivity enhancement by an artificial reef in Delaware Bay, USA

    Energy Technology Data Exchange (ETDEWEB)

    Steimle, F; Foster, Karen L.; Kropp, Roy K.; Conlin, B

    2002-10-15

    To understand the potential enhancement value of a habitat-loss mitigation reef in Delaware Bay, especially as a source of food for fishery resources, the secondary productivity of the reef epifauna and nearby sand infauna was estimated and compared. The mean production of natural sand infauna was estimated at between 215 and 249 kcal m(2) yr(-1), while that of the epifauna on the reef surfaces was between 3990 and 9555 kcal m(2) yr(-1). With the 36 m(2) footprint of a reef unit as a basis for comparison, the 407 m(2) of reef unit surface covering that footprint produced 1.62-3.89 X 10(6) kcal yr(-1) of epifauna compared with 7.74-8.96 X 10(3) kcal yr(-1) per footprint area for the adjacent sand infauna. There was, however, substantial annual variability in the productivity of the epifauna, based on the recruitment success of Mytilus edulis.

  1. An examination of the population dynamics of syngnathid fishes within Tampa Bay, Florida, USA

    Directory of Open Access Journals (Sweden)

    Heather D. MASONJONES, Emily ROSE, Lori Benson McRAE,Danielle L. DIXSON

    2010-02-01

    Full Text Available Seagrass ecosystems worldwide have been declining, leading to a decrease in associated fish populations, especially those with low mobility such as syngnathids (pipefish and seahorses. This two-year pilot study investigated seasonal patterns in density, growth, site fidelity, and population dynamics of Tampa Bay (FL syngnathid fishes at a site adjacent to two marinas under construction. Using a modified mark-recapture technique, fish were collected periodically from three closely located sites that varied in seagrass species (Thalassia spp., Syringodium spp., and mixed-grass sites and their distance from open water, but had consistent physical/chemical environmental characteristics. Fish were marked, photographed for body size and gender measurements, and released the same day at the capture site. Of the 5695 individuals surveyed, 49 individuals were recaptured, indicating a large, flexible population. Population density peaks were observed in July of both years, with low densities in late winter and late summer. Spatially, syngnathid densities were highest closest to the mouth of the bay and lowest near the shoreline. Seven species of syngnathid fishes were observed, and species-specific patterns of seagrass use emerged during the study. However, only two species, Syngnathus scovelli and Hippocampus zosterae, were observed at high frequencies. For these two species, body size decreased across the study period, but while S. scovelli’s population density decreased, H. zosterae’s increased. Across six of the seven species, population size declined over the course of this preliminary study; however, seasonal shifts were impossible to distinguish from potential anthropogenic effects of construction [Current Zoology 56 (1: 118–133, 2010].

  2. Variations in population exposure and evacuation potential to multiple tsunami evacuation phases on Alameda and Bay Farm Islands, California

    Science.gov (United States)

    Peters, J.

    2015-12-01

    Planning for a tsunami evacuation is challenging for California communities due to the variety of earthquake sources that could generate a tsunami. A maximum tsunami inundation zone is currently the basis for all tsunami evacuations in California, although an Evacuation Playbook consisting of specific event-based evacuation phases relating to flooding severity is in development. We chose to investigate the Evacuation Playbook approach for the island community of Alameda, CA since past reports estimated a significant difference in numbers of residents in the maximum inundation zone when compared to an event-based inundation zone. In order to recognize variations in the types of residents and businesses within each phase, a population exposure analysis was conducted for each of the four Alameda evacuation phases. A pedestrian evacuation analysis using an anisotropic, path distance model was also conducted to understand the time it would take for populations to reach high ground by foot. Initial results suggest that the two islands of the City of Alameda have different situations when it comes to the four tsunami evacuation phases. Pedestrian evacuation results suggest that Bay Farm Island would have more success evacuating by vehicle due to limited nearby high ground for pedestrians to reach safety. Therefore, agent-based traffic simulation software was used to model vehicle evacuation off Bay Farm Island. Initial results show that Alameda Island could face challenges evacuating numerous boat docks and a large beach for phases 1 and 2, whereas Bay Farm Island is unaffected at these phases but might be challenged with evacuating by vehicle for phases 3 and maximum due to congestion on limited egress routes. A better understanding of the population exposure within each tsunami Evacuation Playbook phase and the time it would take to evacuate out of each phase by foot or vehicle will help emergency managers implement the evacuation phases during an actual tsunami event.

  3. Final Environmental Statement : Acquisition of lands for the San Francisco Bay National Wildlife Refuge California

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Federal Government proposes to acquire approximately 23,000 acres of land in the South San Francisco Bay region, Alameda, San Mateo and Santa Clara Counties, to...

  4. Social structure and underwater behavior of harbor seals in southern Monterey Bay, California

    OpenAIRE

    Nicholson, Teri Elizabeth

    2000-01-01

    To understand harbor seal social and mating strategies, I examined site fidelity, seasonal abundance and distribution, herd integrity, and underwater behavior of individual harbor seals in southern Monterey Bay. Individual harbor seals (n = 444) were identified by natural markings and represented greater than 80% of an estimated 520 seals within this community. Year to year fidelity of individual harbor seals to southern Monterey Bay coastline was 84% (n = 388), and long-term association...

  5. Brominated diphenyl ethers in the sediments, porewater, and biota of the Chesapeake Bay, USA

    Energy Technology Data Exchange (ETDEWEB)

    Baker, K.; Klosterhaus, S.; Liebert, D.; Stapleton, H. [Maryland Univ., Solomons, MD (United States)

    2004-09-15

    Levels of brominated diphenyl ethers (BDEs) are rapidly increasing in the environment, and in a short time these chemicals have evolved from 'emerging contaminants' to globally-distributed organic pollutants. Recent research demonstrates BDEs are sufficiently stable to be transported long distances in the environment and to accumulate in higher trophic levels. Photolysis and metabolism appear to be dominant loss processes for the parent compounds, generating a variety of lower brominated diphenyl ethers, hydroxylated metabolites, and other products. BDEs are hydrophobic, and therefore their transport in aquatic systems is likely controlled by sorption to sediments and perhaps exchange across the air-water interface. To date, few studies have examined the geochemistry of BDEs in natural waters. In this paper, we review our recent measurements of BDEs in the Chesapeake Bay, a shallow, productive estuary in eastern North America. We focus on the distribution of BDE congeners sediment, porewater, and in faunal benthos along a contamination gradient downstream from a wastewater treatment plant and on the spatial distribution of BDEs in bottom-feeding and pelagic fish species.

  6. Antibodies to Influenza A Viruses in Gulls at Delaware Bay, USA.

    Science.gov (United States)

    Guinn, Kayla; Fojtik, Alinde; Davis-Fields, Nick; Poulson, Rebecca L; Krauss, Scott; Webster, Robert G; Stallknecht, David E

    2016-05-01

    Gulls are the known reservoir for H13 and H16 influenza A viruses (IAV) but also host a diversity of other IAV subtypes. Gulls also share habitats with both ducks and shorebirds, increasing the potential for cross-species IAV transmission. We serologically tested laughing gulls (Leucophaeus atricilla) collected at Delaware Bay during May when they were in direct contact with IAV-infected shorebirds; both species feed on horseshoe crab (Limulus polyphemus) eggs on beaches during this month. From 2010 to 2014, antibody prevalence as determined by competitive blocking enzyme-linked immunosorbent assay ranged from 25%-72%. Antibodies to H13 and H16 were detected by hemagglutination inhibition (HI) tests in 12% and 24% of tested gulls, respectively. Results from virus microneutralization (MN) tests for antibodies to H1-H12, H14, and H15 varied among years but the highest prevalence of neutralizing antibodies was detected against H1 (24%), H5 (25%), H6 (35%), H9 (33%), and H11 (42%) IAV. The subtype diversity identified by serology in gulls was dominated by Group 1 HA subtypes and only partially reflected the diversity of IAV subtypes isolated from shorebirds. PMID:27309077

  7. Holocene climate on the Modoc Plateau, northern California, USA: The view from Medicine Lake

    Science.gov (United States)

    Starratt, S.W.

    2009-01-01

    Medicine Lake is a small (165 ha), relatively shallow (average 7.3 m), intermediate elevation (2,036 m) lake located within the summit caldera of Medicine Lake volcano, Siskiyou County, California, USA. Sediment cores and high-resolution bathymetric and seismic reflection data were collected from the lake during the fall of 1999 and 2000. Sediments were analyzed for diatoms, pollen, density, grain size (sand/mud ratio), total organic carbon (TOC), and micro-scale fabric analysis. Using both 14C (AMS) dating and tephrochronology, the basal sediments were estimated to have been deposited about 11,400 cal year BP, thus yielding an estimated average sedimentation rate of about 20.66 cm/1,000 year. The lowermost part of the core (11,400-10,300 cal year BP) contains the transition from glacial to interglacial conditions. From about 11,000-5,500 cal year BP, Medicine Lake consisted of two small, steep-sided lakes or one lake with two steep-sided basins connected by a shallow shelf. During this time, both the pollen (Abies/Artemisia ratio) and the diatom (Cyclotella/Navicula ratio) evidences indicate that the effective moisture increased, leading to a deeper lake. Over the past 5,500 years, the pollen record shows that effective moisture continued to increase, and the diatom record indicates fluctuations in the lake level. The change in the lake level pattern from one of the increasing depths prior to about 6,000 cal year BP to one of the variable depths may be related to changes in the morphology of the Medicine Lake caldera associated with the movement of magma and the eruption of the Medicine Lake Glass Flow about 5,120 cal year BP. These changes in basin morphology caused Medicine Lake to flood the shallow shelf which surrounds the deeper part of the lake. During this period, the Cyclotella/Navicula ratio and the percent abundance of Isoetes vary, suggesting that the level of the lake fluctuated, resulting in changes in the shelf area available for colonization by

  8. Some challenges of an "upside down" nitrogen budget--science and management in Greenwich Bay, RI (USA).

    Science.gov (United States)

    DiMilla, Peter A; Nixon, Scott W; Oczkowski, Autumn J; Altabet, Mark A; McKinney, Richard A

    2011-04-01

    When nutrients impact estuarine water quality, scientists and managers instinctively focus on quantifying and controlling land-based sources. However, in Greenwich Bay, RI, the estuary opens onto a larger and more intensively fertilized coastal water body (Narragansett Bay). Previous inventories of nitrogen (N) inputs to Greenwich Bay found that N inputs from Narragansett Bay exceeded those from the local watershed, suggesting that recent efforts to reduce local watershed N loads may have little effect on estuarine water quality. We used stable isotopes of N to characterize watershed and Narragansett Bay N sources as well as the composition of primary producers and consumers throughout Greenwich Bay. Results were consistent with previous assessments of the importance of N inputs to Greenwich Bay from Narragansett Bay. As multiple N sources contribute to estuarine water quality, effective management requires attention to individual sources commensurate with overall magnitude, regardless of the political complications that may entail. PMID:21353254

  9. SRTM Perspective View with Landsat Overlay: Santa Monica Bay to Mount Baden-Powell, California

    Science.gov (United States)

    2000-01-01

    Los Angeles may be the world's entertainment capital, but it is a difficult place to locate television and radio antennas. The metropolitan area spreads from the Pacific Ocean to Southern California's upper and lower deserts, valleys, mountains, canyons and coastal plains. While this unique geography offers something for everyone in terms of urban, suburban, small-town, and even semi-rural living, reception of television and radio signals can be problematic where there is no line-of-sight to a transmitting antenna. Broadcasters must choose antenna sites carefully in order to reach the greatest number of customers. Most local television towers are located atop Mount Wilson (elevation 1740 m =5710 ft), which is located on the front range of the San Gabriel Mountains (indistinctly visible, just right of the image center). This site is preferable to the highest peak seen here (Mount Baden-Powell, 2865 m =9399 ft) because it's closer to the urban center and has fewer obstructing peaks. It is also situated at a protruding bend in the mountain front and has few obstructions to the left and right. Computer automated methods combined with elevation models produced by SRTM will quantitatively optimize such factors in the siting of future transmission antenna installations worldwide.This perspective view looks northeastward from the Santa Monica Bay. The San Fernando Valley is on the left, Pasadena is against the mountain front at right-center, and downtown Los Angeles is on the coastal plain directly in front of Mount Baden-Powell. This image was generated by draping a Landsat satellite image over a preliminary topographic map from the Shuttle Radar Topography Mission (SRTM). Landsat has been providing visible and infrared views of the Earth since 1972. SRTM elevation data matches the 30-meter resolution of most Landsat images and will substantially help in analyses of the large and growing Landsat image archive.The elevation data used in this image was acquired by the

  10. Spawning, fertilization, and larval development of Potamocorbula amurensis (Mollusca: Bivalvia) from San Francisco Bay, California

    Science.gov (United States)

    Nicolini, M.H.; Penry, D.L.

    2000-01-01

    In Potamocorbula amurensis time for development to the straight-hinge larval stage is 48 hr at 15??C. Potamocorbula amurensis settles at a shell length of approximately 135 ??m 17 to 19 days after fertilization. Our observations of timing of larval devdlopment in P. amurensis support the hypothesis of earlier workers that its route of initial introduction to San Francisco Bay was as veliger larvae transported in ballast water by trans-Pacific cargo ships. The length of the larval period of P. amurensis relative to water mass residence times in San Francisco Bay suggests that it is sufficient to allow substantial dispersal from North Bay to South Bay populations in concordance with previous observations that genetic differentiation among populations of P. amurensis in San Francisco Bay is low. Potamocorbula amurensis is markedly euryhaline at all stages of development. Spawning and fertilization can occur at salinities from 5 to 25 psu, and eggs and sperms can each tolerance at least a 10-psu step increase or decrease in salinity. Embryos that are 2 hr old can tolerate the same range of salinities from (10 to 30 psu), and by the time they are 24 hr old they can tolerate the same range of salinities (2 to 30 psu) that adult clams can. The ability of P. amurensis larvae to tolerate substantial step changes in salinity suggests a strong potential to survive incomplete oceanic exchanges of ballast water and subsequent discharge into receiving waters across a broad range of salinities.

  11. Bathymetry and digital elevation models of Coyote Creek and Alviso Slough, South San Francisco Bay, California

    Science.gov (United States)

    Foxgrover, Amy C.; Finlayson, David P.; Jaffe, Bruce E.; Fregoso, Theresa A.

    2011-01-01

    In 2010 the U.S. Geological Survey (USGS), Coastal and Marine Geology Program completed three cruises to map the bathymetry of the main channel and shallow intertidal mudflats in the southernmost part of south San Francisco Bay. The three surveys were merged to generate comprehensive maps of Coyote Creek (from Calaveras Point east to the railroad bridge) and Alviso Slough (from the bay to the town of Alviso) to establish baseline bathymetry prior to the breaching of levees adjacent to Alviso and Guadalupe Sloughs as part of the South Bay Salt Pond Restoration Project http://www.southbayrestoration.org. Since 2010 we have conducted four additional surveys to monitor bathymetric change in this region as restoration progresses.

  12. Crustal structure of the coastal and marine San Francisco Bay region, California

    Science.gov (United States)

    Parsons, Tom, (Edited By)

    2002-01-01

    As of the time of this writing, the San Francisco Bay region is home to about 6.8 million people, ranking fifth among population centers in the United States. Most of these people live on the coastal lands along San Francisco Bay, the Sacramento River delta, and the Pacific coast. The region straddles the tectonic boundary between the Pacific and North American Plates and is crossed by several strands of the San Andreas Fault system. These faults, which are stressed by about 4 cm of relative plate motion each year, pose an obvious seismic hazard.

  13. Measurements of salinity, temperature, and tides in south San Francisco Bay, California, at Dumbarton Bridge; 1990-93 water years

    Science.gov (United States)

    Schemel, Laurence E.

    1995-01-01

    The U.S. Geological Survey measures salinity, temperature, and water levels (tides) in southern San Francisco Bay at Dumbarton Bridge as part of a cooperative program with the California State Department of Water Resources. During water years 1990-93, measurements were made at 15-minute intervals with electonic sensors located approximately one meter above the substrate in approximately six meters of water (at mean water level). During March and April of 1991 and 1992, salinity and temperature also were measured with a self-contained system floating one meter below the surface of the water. Sections of the data set were selected to illustrate influences of tidal currents, weather events, and seasonal and interannual variations in climate on salinity, temperature, and water levels at this location. The edited data are provided on high-density disks in comma-delimited, ASCII text files.

  14. Summary of California Clapper Rail Winter Populations in the San Francisco Bay, 1989 to 1993

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The federal and state endangered California clapper rail, Rallus longirostris obsoletus. is a species that, until very recently, was on the verge of extinction....

  15. Survey for the California Black Rail at Tolay Creek, San Pablo Bay National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The California Black Rail (Laterallus jamaicensis coturniculus) is the smallest and most secretive member of the rail family and has been sparsely studied. It is a...

  16. Contaminants in sediment, food-chain biota, and bird eggs from the Newport Bay watershed, Orange County, California.

    Science.gov (United States)

    Santolo, Gary M; Byron, Earl R; Ohlendorf, Harry M

    2016-02-01

    Groundwater-related discharges in the San Diego Creek/Newport Bay watershed in Orange County, California have the potential to adversely affect the surface waters within the watershed and would likely not comply with the established total maximum daily loads (TMDLs) for the watershed. In 2004 and 2005, we studied the concentrations of contaminants of TMDL concern (particularly selenium [Se]) in birds that are at risk of exposure to contaminated food items because they feed and nest in the Newport Bay watershed. Most bioaccumulation is from elevated Se in groundwater downstream of a historic terminal swamp. Se bioaccumulation was observed in all biota tested, and DDE was found in fish and bird egg samples. Effects of contaminants on fish and birds are inconclusive due to the management disturbances in the watershed (e.g., flood control) and lack of bird nesting habitat. Although a significant relationship was observed between DDE concentrations and eggshell thinning in American avocet (Recurvirostra americana) eggs, the shell thinning in avocet and other species examined was not enough to result in hatching failure. Further focused monitoring efforts will be needed to characterize the exposure and risk levels. PMID:26803663

  17. 75 FR 37727 - Disapproval of California State Implementation Plan Revisions, Monterey Bay Unified Air Pollution...

    Science.gov (United States)

    2010-06-30

    ... Air Pollution Control District AGENCY: Environmental Protection Agency (EPA). ACTION: Final rule. SUMMARY: EPA is finalizing disapproval of a revision to the Monterey Bay Unified Air Pollution Control... III. EPA Action IV. Statutory and Executive Order Reviews I. Proposed Action On March 22, 2010(75...

  18. 77 FR 73322 - Revisions to the California State Implementation Plan, Monterey Bay Unified Air Pollution Control...

    Science.gov (United States)

    2012-12-10

    ...: EPA is taking direct final action to approve revisions to the Monterey Bay Unified Air Pollution... Rule 400 into the SIP on August 11, 2005 (70 FR 46770). The MBUAPCD adopted revisions to the SIP.../15/04 version of the rule on June 30, 2010 (75 FR 37727) C. What is the purpose of the submitted...

  19. Effects of forested floodplain soil properties on phosphorous concentrations in two Chesapeake Bay sub-watersheds, Virginia, USA.

    Science.gov (United States)

    Odhiambo, B K; Ricker, M C; Le Blanc, L M; Moxey, K A

    2016-08-01

    Aquatic ecosystems are known to undergo fluctuations in nutrient levels as a result of both natural and anthropogenic processes. Changes in both extrinsic and intrinsic fluvial dynamics necessitate constant monitoring as anthropogenic alterations exert new pressures to previously stable river basins. In this study, we analyzed stream water and riparian zone soil phosphorous (P) dynamics in two third-order sub-watersheds of the lower Chesapeake Bay in Virginia, USA. The Ni River is predominantly forested (70 % forested), and Sugarland Run is a more human impacted (>45 % impervious surfaces) sub-watershed located in the suburbs of Washington D.C. Total stream P concentrations were measured during both high and low flows and Mehlich-3 methods were used to evaluate potential P fluxes in riparian soils. The results show total stream P concentrations in Sugarland Run ranged from 0.002 to 0.20 ppm, with an average of 0.054 ppm. In contrast, the forested Ni River had typical stream P concentrations soil P was significantly higher in the more urbanized Sugarland Run basin (23.8 ± 2.1 ppm) compared to the Ni River basin (16 ± 3.7 ppm). Average stream bank erosion rates and corresponding cut-bank P flux rates were estimated to be 7.98 cm year(-1) and 361 kg P year(-1) for Ni River and 9.84 cm year(-1) and 11,600 kg P year(-1) for Sugarland Run, respectively. The significantly higher values of total P in the stream water and floodplain cut-banks of Sugarland Run suggests erosion and resuspension of previously deposited legacy sediments is an important processes in this human-impacted basin. PMID:27146543

  20. Habitat requirements of the endangered California freshwater shrimp (Syncaris pacifica) in lagunitas and Olema creeks, Marin County, California, USA

    Science.gov (United States)

    Martin, Barbara A.; Saiki, Michael K.; Fong, Darren

    2009-01-01

    This study was conducted to better understand the habitat requirements and environmental limiting factors of Syncaris pacifica, the California freshwater shrimp. This federally listed endangered species is native to perennial lowland streams in a few watersheds in northern California. Field sampling occurred in Lagunitas and Olema creeks at seasonal intervals from February 2003 to November 2004. Ten glides, five pools, and five riffles served as fixed sampling reaches, with eight glides, four pools, and four riffles located in Lagunitas Creek and the remainder in Olema Creek. A total of 1773 S. pacifica was counted during this study, all of which were captured along vegetated banks in Lagunitas Creek. Syncaris pacifica was most numerous in glides (64), then in pools (31), and lastly in riffles (5). According to logistic regression analysis, S. pacifica was mostly associated with submerged portions of streambank vegetation (especially overhanging vegetation such as ferns and blackberries, emergent vegetation such as sedge and brooklime, and fine roots associated with water hemlock, willow, sedge, and blackberries) along with low water current velocity and a sandy substrate. These seemingly favorable habitat conditions for S. pacifica were present in glides and pools in Lagunitas Creek, but not in Olema Creek. ?? 2009 The Crustacean Society.

  1. A Tidally Averaged Sediment-Transport Model for San Francisco Bay, California

    Science.gov (United States)

    Lionberger, Megan A.; Schoellhamer, David H.

    2009-01-01

    A tidally averaged sediment-transport model of San Francisco Bay was incorporated into a tidally averaged salinity box model previously developed and calibrated using salinity, a conservative tracer (Uncles and Peterson, 1995; Knowles, 1996). The Bay is represented in the model by 50 segments composed of two layers: one representing the channel (>5-meter depth) and the other the shallows (0- to 5-meter depth). Calculations are made using a daily time step and simulations can be made on the decadal time scale. The sediment-transport model includes an erosion-deposition algorithm, a bed-sediment algorithm, and sediment boundary conditions. Erosion and deposition of bed sediments are calculated explicitly, and suspended sediment is transported by implicitly solving the advection-dispersion equation. The bed-sediment model simulates the increase in bed strength with depth, owing to consolidation of fine sediments that make up San Francisco Bay mud. The model is calibrated to either net sedimentation calculated from bathymetric-change data or measured suspended-sediment concentration. Specified boundary conditions are the tributary fluxes of suspended sediment and suspended-sediment concentration in the Pacific Ocean. Results of model calibration and validation show that the model simulates the trends in suspended-sediment concentration associated with tidal fluctuations, residual velocity, and wind stress well, although the spring neap tidal suspended-sediment concentration variability was consistently underestimated. Model validation also showed poor simulation of seasonal sediment pulses from the Sacramento-San Joaquin River Delta at Point San Pablo because the pulses enter the Bay over only a few days and the fate of the pulses is determined by intra-tidal deposition and resuspension that are not included in this tidally averaged model. The model was calibrated to net-basin sedimentation to calculate budgets of sediment and sediment-associated contaminants. While

  2. Macroalgas submareales de la bahía de Todos Santos, Baja California, México Submareal macroalgae of the Todos Santos Bay, Baja California, Mexico

    Directory of Open Access Journals (Sweden)

    Raúl Aguilar-Rosas

    2010-12-01

    Full Text Available Con el fin de identificar y caracterizar la composición de especies de la zona submareal de la bahía de Todos Santos, Baja California, México; se realizaron muestreos de macroalgas marinas bentónicas en 7 sitios durante 1995-2000. Como resultado de 25 buceos Scuba entre 3 y 33 m de profundidad se encontraron 150 especies de macroalgas para el área de estudio; 10 son Chlorophyta, 26 Phaeophyta y 114 Rhodophyta. Del total, 47 son registros nuevos para el área de estudio y 2 de éstos, Faucheocolax attenuata Setchell y Minium parvum R.L. Moe, son nuevos para la flora marina del Pacífico de México. Se incluye una revisión de las investigaciones en las que se han considerado las macroalgas presentes en la bahía de Todos Santos y una discusión sobre la composición de las especies encontradas, su distribución vertical y reproducción, así como sobre las especies epífitas y parásitas del área.In order to identify and characterize the species composition of the subtidal zone of the Todos Santos Bay, Baja California, Mexico, benthic marine macroalgae were sampled at 7 sites from 1995 to 2000. As a result of 25 scuba at derds for the study area, of which Faucheocolax attenuata Setchell and R.L Moe Minium parvum are new to the marine flora of Pacific Mexico. We include a research that consider the macroalpths between 3 and 33 m we found a total of 150 species of macroalgae for the study area, of which 10 are Chlorophyta, 26 Phaeophyta and 114 Rhodophyta; 47 species represent new recogae in the Todos Santos Bay and a discussion on the composition of species found, its vertical distribution and reproduction, particularly the species epiphytes and parasites present in the study area.

  3. Physical property data from the ICDP-USGS Eyreville cores A and B, Chesapeake Bay impact structure, Virginia, USA, acquired using a multisensor core logger

    Science.gov (United States)

    Pierce, H.A.; Murray, J.B.

    2009-01-01

    The International Continental Scientific Drilling Program (ICDP) and the U.S. Geological Survey (USGS) drilled three core holes to a composite depth of 1766 m within the moat of the Chesapeake Bay impact structure. Core recovery rates from the drilling were high (??90%), but problems with core hole collapse limited the geophysical downhole logging to natural-gamma and temperature logs. To supplement the downhole logs, ??5% of the Chesapeake Bay impact structure cores was processed through the USGS GeoTek multisensor core logger (MSCL) located in Menlo Park, California. The measured physical properties included core thickness (cm), density (g cm-3), P-wave velocity (m s-1), P-wave amplitude (%), magnetic susceptibility (cgs), and resistivity (ohm-m). Fractional porosity was a secondary calculated property. The MSCL data-sampling interval for all core sections was 1 cm longitudinally. Photos of each MSCL sampled core section were imbedded with the physical property data for direct comparison. These data have been used in seismic, geologic, thermal history, magnetic, and gravity models of the Chesapeake Bay impact structure. Each physical property curve has a unique signature when viewed over the full depth of the Chesapeake Bay impact structure core holes. Variations in the measured properties reflect differences in pre-impact target-rock lithologies and spatial variations in impact-related deformation during late-stage crater collapse and ocean resurge. ?? 2009 The Geological Society of America.

  4. Simulation model of Skeletonema costatum population dynamics in northern San Francisco Bay, California

    Science.gov (United States)

    Cloern, J.E.; Cheng, R.T.

    1981-01-01

    A pseudo-two-dimensional model is developed to simulate population dynamics of one dominant phytoplankton species (Skeletonema costatum) in northern San Francisco Bay. The model is formulated around a conceptualization of this estuary as two distinct but coupled subsystems-a deep (10-20 m) central channel and lateral areas with shallow (<2 m) water and slow circulation. Algal growth rates are governed by solar irradiation, temperature and salinity, while population losses are assumed to result from grazing bycalanoid copepods. Consequences of estuarine gravitational circulation are approximated simply by reducing convective-dispersive transport in that section of the channel (null zone) where residual bottom currents are near zero, and lateral mixing is treated as a bulkexchange process between the channel and the shoals. Model output is consistent with the hypothesis that, because planktonic algae are light-limited, shallow areas are the sites of active population growth. Seasonal variation in the location of the null zone (a response to variable river discharge) is responsible for maintaining the spring bloom of neritic diatoms in the seaward reaches of the estuary (San Pablo Bay) and the summer bloom upstream (Suisun Bay). Model output suggests that these spring and summer blooms result from the same general process-establishment of populations over the shoals, where growth rates are rapid, coupled with reduced particulate transport due to estuarine gravitational circulation. It also suggests, however, that the relative importance of physical and biological processes to phytoplankton dynamics is different in San Pablo and Suisun Bays. Finally, the model has helped us determine those processes having sufficient importance to merit further refinement in the next generation of models, and it has given new direction to field studies. ?? 1981 Academic Press Inc. (London) Ltd.

  5. Counterfeit Norco Poisoning Outbreak - San Francisco Bay Area, California, March 25-April 5, 2016.

    Science.gov (United States)

    Vo, Kathy T; van Wijk, Xander M R; Lynch, Kara L; Wu, Alan H B; Smollin, Craig G

    2016-01-01

    On March 28, 2016, two patients were evaluated at the Contra Costa Regional Medical Center emergency department (ED) in Contra Costa County, California, for nausea, vomiting, central nervous system depression, and respiratory depression, 30 minutes after ingesting what appeared to be Norco, a prescription opioid pain medication that contains acetaminophen and hydrocodone. The patients purchased the drug from a friend a few days earlier. The two cases of drug intoxication were reported to a Contra Costa County Health Department public health official who subsequently notified the California State Health Department. PMID:27123589

  6. c180nc.m77t - MGD77 data file for Geophysical data from field activity C-1-80-NC in Monterey Bay, Northern California from 05/21/1980 to 05/22/1980

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Single-beam bathymetry data along with transit satellite navigation data was collected as part of field activity C-1-80-NC in Monterey Bay, Northern California from...

  7. Spatiotemporal variations in the abundance and composition of bulk and chromophoric dissolved organic matter in seasonally hypoxia-influenced Green Bay, Lake Michigan, USA.

    Science.gov (United States)

    DeVilbiss, Stephen E; Zhou, Zhengzhen; Klump, J Val; Guo, Laodong

    2016-09-15

    Green Bay, Lake Michigan, USA, is the largest freshwater estuary in the Laurentian Great Lakes and receives disproportional terrestrial inputs as a result of a high watershed to bay surface area ratio. While seasonal hypoxia and the formation of "dead zones" in Green Bay have received increasing attention, there are no systematic studies on the dynamics of dissolved organic matter (DOM) and its linkage to the development of hypoxia. During summer 2014, bulk dissolved organic carbon (DOC) analysis, UV-vis spectroscopy, and fluorescence excitation-emission matrices (EEMs) coupled with PARAFAC analysis were used to quantify the abundance, composition and source of DOM and their spatiotemporal variations in Green Bay, Lake Michigan. Concentrations of DOC ranged from 202 to 571μM-C (average=361±73μM-C) in June and from 279 to 610μM-C (average=349±64μM-C) in August. In both months, absorption coefficient at 254nm (a254) was strongly correlated to bulk DOC and was most abundant in the Fox River, attesting a dominant terrestrial input. Non-chromophoric DOC comprised, on average, ~32% of bulk DOC in June with higher terrestrial DOM and ~47% in August with higher aquagenic DOM, indicating that autochthonous and more degraded DOM is of lower optical activity. PARAFAC modeling on EEM data resulted in four major fluorescent DOM components, including two terrestrial humic-like, one aquagenic humic-like, and one protein-like component. Variations in the abundance of DOM components further supported changes in DOM sources. Mixing behavior of DOM components also indicated that while bulk DOM behaved quasi-conservatively, significant compositional changes occurred during transport from the Fox River to the open bay. PMID:27243792

  8. An Investigation of Summertime Inland Water Body Temperatures in California and Nevada (USA): Recent Trends and Future Projections

    Science.gov (United States)

    Healey, Nathan; Hook, Simon; Piccolroaz, Sebastiano; Toffolon, Marco; Radocinski, Robert

    2016-04-01

    Inland water body temperature has been identified as an ideal indicator of potential climate change. Understanding inland water body temperature trends is important for forecasting impacts to limnological, biological, and hydrological resources. Many inland water bodies are situated in remote locations with incomplete data records of in-situ monitoring or lack in-situ observations altogether. Thus, the utilization of satellite data is essential for understanding the behavior of global inland water body temperatures. Part of this research provides an analysis of summertime (July-September) temperature trends in the largest California/Nevada (USA) inland water bodies between 1991 and 2015. We examine satellite temperature retrievals from ATSR (ATSR-1, ATSR-2, AATSR), MODIS (Terra and Aqua), and VIIRS sensors. Our findings indicate that inland water body temperatures in the western United States were rapidly warming between 1991 and 2009, but since then trends have been decreasing. This research also includes implementation of a model called air2water to predict future inland water body surface temperature through the sole input of air temperature. Using projections from CMIP5-CCSM4 output, our model indicates that Lake Tahoe (USA) is expected to experience an increase of roughly 3 °C by 2100.

  9. A comparative analysis of selected heavy equipment functions at the Naval Support Activity Monterey Bay and the city of Monterey, California

    OpenAIRE

    Petty, Anita S.; Pfefferkorn, Jessica M.

    1999-01-01

    To meet continuing budget and personnel limitations and to fund weapons modernization, DoD is increasing its emphasis on outsourcing support activities to reduce costs and increase efficiencies. Recent studies suggest that aggressive outsourcing of support activities by the DoD could produce billions of dollars in savings. This thesis examines the applicability of outsourcing and partnering initiatives at the Naval Support Activity, Monterey Bay (NSAMB), and the City of Monterey, California t...

  10. Recent changes in breast cancer incidence and risk factor prevalence in San Francisco Bay area and California women: 1988 to 2004

    OpenAIRE

    Keegan, Theresa HM; Chang, Ellen T.; John, Esther M.; Horn-Ross, Pamela L; Wrensch, Margaret R.; Glaser, Sally L.; Clarke, Christina A.

    2007-01-01

    Introduction Historically, the incidence rate of breast cancer among non-Hispanic white women living in the San Francisco Bay area (SFBA) of California has been among the highest in the world. Substantial declines in breast cancer incidence rates have been documented in the United States and elsewhere during recent years. In light of these reports, we examined recent changes in breast cancer incidence and risk factor prevalence among non-Hispanic white women in the SFBA and other regions of C...

  11. Heavy metals in geochemical sediment fractions of the border region between Baja California, Mexico, and California, USA; Metales pesados en fracciones geoquimicas de sedimentos de la region fronteriza de Baja California, Mexico, y California, EUA

    Energy Technology Data Exchange (ETDEWEB)

    Villaescusa-Celaya, Julio A; Gutierrez-Galindo, Efrain A; Flores-Munoz, Gilberto [Instituto de Investigaciones Oceanologicas, Universidad Autonoma de Baja California, Ensenada, B.C., (Mexico)

    1997-03-01

    The concentrations of the heavy metals Cu, Zn, Ni, Cr, Pb, Cd, Ag, Mn and Fe in the different geochemical sediment fractions are determined in this study, as a means of assessing the impact of residual wastewater on the coastal sediments of the region. During an oceanographic cruise in April 1992 (ECOBAC IV), 20 samples of surface sediments were collected from the coastal shelf of the border region between Baja California (Mexico) and California (USA), The sediment samples were subjected to a sequential extraction procedure designed to obtain the geochemical fractions defined as: exchangeable (F1), carbonates (F2), Fe and Mn oxyhydroxides (F3), organic matter/sulfides (F4) and residual or lithogenic (F5). The operational speciation of the metals indicates that the principal phases in the sediments that accumulate metal are the detrital or lithogenic matrix, the Fe and Mn oxyhydroxides and the organic Matter/sulfides, in this order. In general, the spatial distribution of the heavy metals in the reactive phase (defined as the sum of F1-F4) tended to increase in concentration in offshore sediments. The heavy metals in the reactive phase are apparently controlled by the concentration of reactive iron in the sediments, except for Pb, Cd and Ag, suggesting that the latter elements are controlled by other processes, such as particulate matter of biogenic origin. In contrast, the spatial distribution of heavy metals in the detrital phase behaved inversely, that is, the greatest concentrations of metals are found close to the coast off the wastewater treatment plant at Punta Bandera, Baja California. The average concentrations of total metals (sum of F1-F5) were 7.6, 40, 21, 68, 428, 11, 0.10 and 0.025 {mu}g{sup -}1 for Cu, Zn, Ni, Cr, Mn, Pb, Cd and Ag, respectively, and 2.3% for Fe. These concentrations are similar to those reported for uncontaminated reference sediments from southern California, indicating that a large amount of pollutants from the effluent of residual

  12. Analysis of a viral metagenomic library from 200 m depth in Monterey Bay, California constructed by direct shotgun cloning

    Directory of Open Access Journals (Sweden)

    Preston Christina M

    2011-06-01

    Full Text Available Abstract Background Viruses have a profound influence on both the ecology and evolution of marine plankton, but the genetic diversity of viral assemblages, particularly those in deeper ocean waters, remains poorly described. Here we report on the construction and analysis of a viral metagenome prepared from below the euphotic zone in a temperate, eutrophic bay of coastal California. Methods We purified viruses from approximately one cubic meter of seawater collected from 200m depth in Monterey Bay, CA. DNA was extracted from the virus fraction, sheared, and cloned with no prior amplification into a plasmid vector and propagated in E. coli to produce the MBv200m library. Random clones were sequenced by the Sanger method. Sequences were assembled then compared to sequences in GenBank and to other viral metagenomic libraries using BLAST analyses. Results Only 26% of the 881 sequences remaining after assembly had significant (E ≤ 0.001 BLAST hits to sequences in the GenBank nr database, with most being matches to bacteria (15% and viruses (8%. When BLAST analysis included environmental sequences, 74% of sequences in the MBv200m library had a significant match. Most of these hits (70% were to microbial metagenome sequences and only 0.7% were to sequences from viral metagenomes. Of the 121 sequences with a significant hit to a known virus, 94% matched bacteriophages (Families Podo-, Sipho-, and Myoviridae and 6% matched viruses of eukaryotes in the Family Phycodnaviridae (5 sequences or the Mimivirus (2 sequences. The largest percentages of hits to viral genes of known function were to those involved in DNA modification (25% or structural genes (17%. Based on reciprocal BLAST analyses, the MBv200m library appeared to be most similar to viral metagenomes from two other bays and least similar to a viral metagenome from the Arctic Ocean. Conclusions Direct cloning of DNA from diverse marine viruses was feasible and resulted in a distribution of virus

  13. Emigration, immigration and return: Mexican immigrant’s cycle in Calexico, California, USA

    OpenAIRE

    Norma Fimbres Durazo

    2000-01-01

    This article describes a community of Mexican immigrants legally residing in the city of Calexico, California. Firstly, a brief review on the history of migration from Mexico to the United States, chiefly to Imperial County, is presented. Afterwards, the traits of the immigrant group is described according to the data coming from a survey that was applied to 407 Mexican immigrants. To conclude, the results provided by the survey on the causes for such emigration, the motives for immigrating, ...

  14. Age Determination of the Remaining Peat in the Sacramento-San Joaquin Delta, California, USA

    Science.gov (United States)

    Drexler, Judith Z.; de Fontaine, Christian S.; Knifong, Donna L.

    2007-01-01

    Introduction The Sacramento-San Joaquin Delta of California was once a 1,400 square kilometer (km2) tidal marsh, which contained a vast layer of peat ranging up to 15 meters (m) thick (Atwater and Belknap, 1980). Because of its favorable climate and highly fertile peat soils, the majority of the Delta was drained and reclaimed for agriculture during the late 1800s and early 1900s. Drainage of the peat soils changed the conditions in the surface layers of peat from anaerobic (having no free oxygen present) to aerobic (exposed to the atmosphere). This change in conditions greatly increased the decomposition rate of the peat, which consists largely of organic (plant) matter. Thus began the process of land-surface subsidence, which initially was a result of peat shrinkage and compaction, and later largely was a result of oxidation by which organic carbon in the peat essentially vaporized to carbon dioxide (Deverel and others, 1998; Ingebritsen and Ikehara, 1999). Because of subsidence, the land-surface elevation on farmed islands in the Delta has decreased from a few meters to as much as 8 m below local mean sea level (California Department of Water Resources, 1995; Steve Deverel, Hydrofocus, Inc., written commun., 2007). The USGS, in collaboration with the University of California at Davis, and Hydrofocus Inc. of Davis, California, has been studying the formation of the Delta and the impact of wetland reclamation on the peat column as part of a project called Rates and Evolution of Peat Accretion through Time (REPEAT). The purpose of this report is to provide results on the age of the remaining peat soils on four farmed islands in the Delta.

  15. Legacy Mercury in Alviso Slough, South San Francisco Bay, California: Concentration, Speciation and Mobility

    Science.gov (United States)

    Marvin-DiPasquale, Mark; Cox, Marisa H.

    2007-01-01

    Mercury (Hg) is a significant contaminant in the waters, sediment and biota of San Francisco Bay, largely resulting from extensive historic regional mining activities. Alviso Slough represents one of the most mercury contaminated waterways entering south San Francisco Bay, as it is associated with the drainage of the New Almaden mercury mining district. Wetland habitat restoration of former salt manufacturing ponds adjacent to Alviso Slough is currently being planned. One management scenario being considered is a levee breach between Alviso Slough and Pond A8, which will allow reconnection of the salt pond with the tidal slough. This action is projected to increase the tidal prism within Alviso Slough and result in some degree of sediment remobilization as the main channel deepens and widens. The focus of the current study is to assess: a) the current mercury species composition and concentration in sediments within the Alviso Slough main channel and its associated fringing marsh plain, b) how much of each mercury species will be mobilized as a result of projected channel deepening and widening, and c) potential changes in inorganic reactive mercury bioavailability (for conversion to toxic methylmercury) associated with the mobilized sediment fraction. The current report details the field sampling approach and all laboratory analyses conducted, as well as provides the complete dataset associated with this project including a) a quantitative assessment of mercury speciation (total mercury, reactive mercury and methylmercury), b) estimates of the quantity of sediment and mercury mobilized based on 20-foot and 40-foot levee wall notch scenarios, and c) results from a sediment scour experiment examining the changes in the reactive mercury pool under four treatment conditions (high / low salinity and oxic / anoxic water). Ancillary sediment data also collected and reported herein include bulk density, organic content, magnetic susceptibility, percent dry weight, grain

  16. Cold seeps in Monterey Bay, California: Geochemistry of pore waters and relationship to benthic foraminiferal calcite

    Energy Technology Data Exchange (ETDEWEB)

    Gieskes, Joris, E-mail: jgieskes@ucsd.edu [Scripps Institution of Oceanography, IOD-0208, 9500 Gilman Drive, La Jolla, CA 92093-0208 (United States); Rathburn, Anthony E. [Scripps Institution of Oceanography, IOD-0208, 9500 Gilman Drive, La Jolla, CA 92093-0208 (United States)] [Indiana State University, Department of Earth and Environmental Systems, Terre Haute, IN 47809 (United States); Martin, Jonathan B. [University of Florida, Department of Geological Sciences, Gainesville, FL 32611-2120 (United States); Perez, M. Elena [Indiana State University, Department of Earth and Environmental Systems, Terre Haute, IN 47809 (United States)] [The Natural History Museum, Department of Palaeontology, Cromwell Road, London SW7 5BD (United Kingdom); Mahn, Chris [Scripps Institution of Oceanography, IOD-0208, 9500 Gilman Drive, La Jolla, CA 92093-0208 (United States); Bernhard, Joan M. [Woods Hole Oceanographic Institution, Geology and Geophysics Department, MS52, Woods Hole, MA 02543 (United States); Day, Shelley [University of Florida, Department of Geological Sciences, Gainesville, FL 32611-2120 (United States)

    2011-05-15

    Highlights: > We describe the geochemistry of pore waters in the Clam Flats area of Monterey Bay. > The geochemical data are compared with the {delta}{sup 13}C chemistry of benthic foraminifera. > Living foraminifera indicate little effects of pore water low {delta}{sup 13}C (DIC) in the clam bed. > This phenomenon and its implications are discussed in detail. > Implications with regards to paleo-methane seepage are discussed. - Abstract: An extensive geochemical and biogeochemical examination of CH{sub 4} seeps in the Clam Flats area of Monterey Bay provides insight into the character of relationships between seep geochemistry and benthic foraminiferal geochemistry. The area is characterized by sulfide-rich fluids. Sulfide increases are associated with large increases in alkalinity, as well as small decreases in dissolved Ca and Mg. In addition, only small increases in NH{sub 4} are observed, but values of {delta}{sup 13}C of dissolved inorganic C are as low as -60 per mille at shallow depths (<3 cm). These observations indicate that all these processes are related to the bacterial oxidation of CH{sub 4}, which is transported upward by slow seepage of pore fluids. The geochemistry of the pore fluids should be relevant to the geochemistry of the carbonate tests of living and dead foraminifera. However, a profound disequilibrium of approximately an order of magnitude occurs between the {delta}{sup 13}C values of stained (cytoplasm-containing) foraminiferal carbonate and the C isotope values of ambient pore water dissolved inorganic C. Reasons are unclear for this isotopic disequilibrium, but have important implications for interpretations of foraminiferal carbonate as a paleoenvironmental proxy. Much fine scale work is needed to fully understand the relationships between the biogeochemistry of benthic foraminifera and the geochemistry of the pore waters where they live.

  17. Identifying nest predators of American avocets (Recurvirostra americana) and black-necked stilts (Himantopus mexicanus) in San Francisco Bay, California

    Science.gov (United States)

    Herring, Garth; Ackerman, Joshua T.; Takekawa, John Y.; Eagles-Smith, Collin A.; Eadie, John M.

    2011-01-01

    We evaluated predation on nests and methods to detect predators using a combination of infrared cameras and plasticine eggs at nests of American avocets (Recurvirostra americana) and black-necked stilts (Himantopus mexicanus) in Don Edwards San Francisco Bay National Wildlife Refuge, San Mateo and Santa Clara counties, California. Each technique indicated that predation was prevalent; 59% of monitored nests were depredated. Most identifiable predation (n = 49) was caused by mammals (71%) and rates of predation were similar on avocets and stilts. Raccoons (Procyon lotor) and striped skunks (Mephitis mephitis) each accounted for 16% of predations, whereas gray foxes (Urocyon cinereoargenteus) and avian predators each accounted for 14%. Mammalian predation was mainly nocturnal (mean time, 0051 h +/- 5 h 36 min), whereas most avian predation was in late afternoon (mean time, 1800 h +/- 1 h 26 min). Nests with cameras and plasticine eggs were 1.6 times more likely to be predated than nests where only cameras were used in monitoring. Cameras were associated with lower abandonment of nests and provided definitive identification of predators.

  18. New observations on the Middle Fork Eel River coal-bearing beds, Mendocino County, California, USA

    Energy Technology Data Exchange (ETDEWEB)

    Bartley, Russell H. [Mendocino County Museum, 400 East Commercial Street, Willits, CA 95490 (United States); Bartley, Sylvia E. [Noyo Hill House, 28953 Highway 20, Fort Bragg, CA 95437 (United States); Springer, David J. [College of the Redwoods-Mendocino Coast, 1211 Del Mar Drive, Fort Bragg, CA 95437 (United States); Erwin, Diane M. [Museum of Paleontology, 1101 Valley Life Sciences Building, University of California, Berkeley, CA 94720 (United States)

    2010-08-01

    Mid-19th century reports of ''immense'' coal outcrops in the Middle Fork Eel River (MFER) drainage near Round Valley in California's northern Coast Ranges fueled the early geological interest in this area, with mine development the primary focus of many studies. It was not until Samuel G. Clark's 1940 ''Geology of the Covelo District, Mendocino County, California,'' that the coal was placed in its regional geologic context and assigned to the Miocene, a determination that relied primarily on a Desmostylus hesperus molar found in shale overlying the coal and an associated equivocal, though Miocene-compatible, marine molluscan fauna. Our investigation of the MFER coal-bearing beds has provided new data from foraminifera, marine mollusks, fish remains, and the first reported fossil plants, which as a whole support Clark's Miocene age assignment. We also present an updated stratigraphy proposing under modern-day stratigraphic protocols that the informal name Sand Bank beds (SBb) be used in place of the Temblor Formation to refer to the SBb coal-bearing fluvial-marine unit. Analysis of the SBb stratigraphy and sedimentology reveals the presence of a fluvial system that flowed from a distal upland region southward toward the paleocoast of California. An abundant diverse palynoflora containing lycophytes, ferns, conifers, and mesic, thermophillic herbaceous and woody angiosperms indicates the drainage flowed through a coastal swampy forested bottomland and estuarine environment before emptying into a coastal basin. Presence of Taxodium-like wood, foliage, pollen, and other ''hydrophiles'' suggests the MFER coal was a local mire buried by the progradation of the SBb fluvial system during a regressive phase, an interpretation to be tested with future field work and detailed compositional analysis of the coal. (author)

  19. How a tax stole a market overnight: Bunkers in Los Angeles, California, U.S.A

    International Nuclear Information System (INIS)

    At the bottom of the barrel is bunker fuel, a lesser value to refineries but quite important to shippers, port authorities, and associated sectors. Here is a brief story about how a California tax sent ships to ports of call other than Los Angeles and Long Beach - and slashed bunker sales and jobs. The government is reconsidering its actions, but some damage may be irreversible. This issue also presents the following: (1) the ED Refining Netback Data Series for the US Gulf and West Coasts, Rotterdam and Singapore as of July 24, 1992; and (2) the ED Fuel Price/Tax Series for countries of the Eastern Hemisphere, July 1992 Edition

  20. Understanding Urban Watersheds through Digital Interactive Maps, San Francisco Bay Area, California

    Science.gov (United States)

    Sowers, J. M.; Ticci, M. G.; Mulvey, P.

    2014-12-01

    Dense urbanization has resulted in the "disappearance" of many local creeks in urbanized areas surrounding the San Francisco Bay. Long reaches of creeks now flow in underground pipes. Municipalities and water agencies trying to reduce non-point-source pollution are faced with a public that cannot see and therefore does not understand the interconnected nature of the drainage system or its ultimate discharge to the bay. Since 1993, we have collaborated with the Oakland Museum, the San Francisco Estuary Institute, public agencies, and municipalities to create creek and watershed maps to address the need for public understanding of watershed concepts. Fifteen paper maps are now published (www.museumca.org/creeks), which have become a standard reference for educators and anyone working on local creek-related issues. We now present digital interactive creek and watershed maps in Google Earth. Four maps are completed covering urbanized areas of Santa Clara and Alameda Counties. The maps provide a 3D visualization of the watersheds, with cartography draped over the landscape in transparent colors. Each mapped area includes both Present and Past (circa 1800s) layers which can be clicked on or off by the user. The Present layers include the modern drainage network, watershed boundaries, and reservoirs. The Past layers include the 1800s-era creek systems, tidal marshes, lagoons, and other habitats. All data are developed in ArcGIS software and converted to Google Earth format. To ensure the maps are interesting and engaging, clickable icons pop-up provide information on places to visit, restoration projects, history, plants, and animals. Maps of Santa Clara Valley are available at http://www.valleywater.org/WOW.aspx. Maps of western Alameda County will soon be available at http://acfloodcontrol.org/. Digital interactive maps provide several advantages over paper maps. They are seamless within each map area, and the user can zoom in or out, and tilt, and fly over to explore

  1. Tuberculosis and HIV Co-infection, California, USA, 1993–2008

    Science.gov (United States)

    Porco, Travis C.; Westenhouse, Janice; Damesyn, Mark; Facer, Matt; Hill, Julia; Xia, Qiang; Watt, James P.; Hopewell, Philip C.; Flood, Jennifer

    2013-01-01

    To understand the epidemiology of tuberculosis (TB) and HIV co-infection in California, we cross-matched incident TB cases reported to state surveillance systems during 1993–2008 with cases in the state HIV/AIDS registry. Of 57,527 TB case-patients, 3,904 (7%) had known HIV infection. TB rates for persons with HIV declined from 437 to 126 cases/100,000 persons during 1993–2008; rates were highest for Hispanics (225/100,000) and Blacks (148/100,000). Patients co-infected with TB–HIV during 2001–2008 were significantly more likely than those infected before highly active antiretroviral therapy became available to be foreign born, Hispanic, or Asian/Pacific Islander and to have pyrazinamide-monoresistant TB. Death rates decreased after highly active antiretroviral therapy became available but remained twice that for TB patients without HIV infection and higher for women. In California, HIV-associated TB has concentrated among persons from low and middle income countries who often acquire HIV infection in the peri-immigration period. PMID:23745218

  2. Amphibian chytrid fungus (Batrachochytrium dendrobatidis) in coastal and montane California, USA Anurans

    Science.gov (United States)

    Fellers, Gary M.; Cole, Rebecca A.; Reinitz, David M.; Kleeman, Patrick M.

    2011-01-01

    We found amphibian chytrid fungus (Bd = Batrachochytrium dendrobatidis) to be widespread within a coastalwatershed at Point Reyes National Seashore, California and within two high elevation watersheds at Yosemite NationalPark, California. Bd was associated with all six species that we sampled (Bufo boreas, B. canorus, Pseudacris regilla, Ranadraytonii, R. sierrae, and Lithobates catesbeianus). For those species sampled at 10 or more sites within a watershed, thepercentage of Bd-positive sites varied from a low of 20.7% for P. regilla at one Yosemite watershed to a high of 79.6% forP. regilla at the Olema watershed at Point Reyes. At Olema, the percent of Bd-positive water bodies declined each year ofour study (2005-2007). Because P. regilla was the only species found in all watersheds, we used that species to evaluatehabitat variables related to the sites where P. regilla was Bd-positive. At Olema, significant variables were year, length ofshoreline (perimeter), percentage cover of rooted vegetation, and water depth. At the two Yosemite watersheds, waterdepth, water temperature, and silt/mud were the most important covariates, though the importance of these three factorsdiffered between the two watersheds. The presence of Bd in species that are not declining suggests that some of theamphibians in our study were innately resistant to Bd, or had developed resistance after Bd became established.

  3. Accumulation of pesticides in pacific chorus frogs (Pseudacris regilla) from California's Sierra Nevada Mountains, USA

    Science.gov (United States)

    Smalling, Kelly L.; Fellers, Gary M.; Kleeman, Patrick M.; Kuivila, Kathryn M.

    2013-01-01

    Pesticides are receiving increasing attention as potential causes of amphibian declines, acting singly or in combination with other stressors, but limited information is available on the accumulation of current-use pesticides in tissue. The authors examined potential exposure and accumulation of currently used pesticides in pond-breeding frogs (Pseudacris regilla) collected from 7 high elevations sites in northern California. All sites sampled are located downwind of California's highly agricultural Central Valley and receive inputs of pesticides through precipitation and/or dry deposition. Whole frog tissue, water, and sediment were analyzed for more than 90 current-use pesticides and pesticide degradates using gas chromatography–mass spectrometry. Two fungicides, pyraclostrobin and tebuconazole, and one herbicide, simazine, were the most frequently detected pesticides in tissue samples. Median pesticide concentration ranged from 13 µg/kg to 235 µg/kg wet weight. Tebuconazole and pyraclostrobin were the only 2 compounds observed frequently in frog tissue and sediment. Significant spatial differences in tissue concentration were observed, which corresponded to pesticide use in the upwind counties. Data generated indicated that amphibians residing in remote locations are exposed to and capable of accumulating current-use pesticides. A comparison of P. regilla tissue concentrations with water and sediment data indicated that the frogs are accumulating pesticides and are potentially a more reliable indicator of exposure to this group of pesticides than either water or sediment.

  4. New Tsunami Response, Mitigation, and Recovery Planning "Playbooks" for California (USA) Maritime Communities

    Science.gov (United States)

    Wilson, R. I.; Lynett, P. J.; Miller, K.; Eskijian, M.; Dengler, L. A.; Ayca, A.; Keen, A.; Admire, A. R.; Siegel, J.; Johnson, L. A.; Curtis, E.; Hornick, M.

    2015-12-01

    The 2010 Chile and 2011 Japan tsunamis both struck the California coast offering valuable experience and raised a number of significant issues for harbor masters, port captains, and other maritime entities. There was a general call for more planning products to help guide maritime communities in their tsunami response, mitigation, and recovery activities. The State of California is working with the U.S. Federal Emergency Management Agency (FEMA), the U.S. National Tsunami Hazard Mitigation Program (NTHMP), and other tsunami experts to provide communities with new tsunami planning tools to address these issues: Response Playbooks and plans have been developed for ports and harbors identifying potential tsunami current hazards and related damage for various size events. Maps have been generated showing minor, moderate, and severe damage levels that have been linked to current velocity thresholds of 3, 6, and 9 knots, respectively. Knowing this information allows harbor personnel to move ships or strengthen infrastructure prior to the arrival of distant source tsunamis. Damage probability tools and mitigation plans have been created to help reduce tsunami damage by evaluating the survivability of small and large vessels in harbors and ports. These results were compared to the actual damage assessments performed in California and Japan following the 2011 Japanese tsunami. Fragility curves were developed based on current velocity and direction to help harbor and port officials upgrade docks, piles, and related structures. Guidance documents are being generated to help in the development of both local and statewide recovery plans. Additional tools, like post-tsunami sediment and debris movement models, will allow harbors and ports to better understand if and where recovery issues are most likely to occur. Streamlining the regulatory and environmental review process is also a goal of the guidance. These maritime products and procedures are being integrated into guidance

  5. Heavy metal contamination from historic mining in upland soil and estuarine sediments of Egypt Bay, Maine, USA

    Science.gov (United States)

    Osher, L. J.; Leclerc, L.; Wiersma, G. B.; Hess, C. T.; Guiseppe, V. E.

    2006-10-01

    Concentrations of Cd, Cu, Pb and Zn in sediments of Egypt Bay in Hancock County, Maine, are elevated above background levels. The source of the contamination is Cu mining that occurred in the uplands adjacent to Egypt Stream between 1877 and 1885. Egypt Stream is a tributary to Egypt Bay. Egypt Bay is part of the Taunton Bay estuary system. The Hagan Mine was one of the mines extracting metals from the sulfide deposits in Downeast Maine north of Penobscot Bay. Metal concentrations were determined using ICP-AES after sample digestion with nitric acid. Soil collected from the coarse textured mine tailings pile contained elevated concentrations of Cd, Cu, Pb and Zn, but the majority of the surface soils at the Hagan Mine site were not contaminated. Estuary sediments from the surface to 100 cm depth were collected in four locations within Egypt Bay. Below 40 cm, metal concentrations in sediments were similar to those in uncontaminated upland soils. Metal concentrations in the estuary sediments between the surface and 26 cm were above background levels. According to 210Pb dating, the sediment at 26-34 cm depth was likely to have been deposited at the time the historic mines were in operation. Concentrations of Cd, Cu, Pb, and Zn in sediment from the 32-34 cm depth interval are similar to concentrations in the upland soil sample from the mine tailings pile. Elevated Pb concentrations in sediments from the surface to 24 cm are from atmospheric Pb deposition from anthropogenic sources. Sediment in the top 10 cm of the estuary has been mixed both by the polychaete worm Nereis virens and by those harvesting the worms for sale as fish bait.

  6. The monterey bay broadband ocean bottom seismic observatory

    OpenAIRE

    Romanowicz, B.; Seismological Laboratory, University of California, Berkeley; Stakes, D.; Monterey Bay Aquarium Research Institute; Dolenc, D.; Seismological Laboratory, University of California, Berkeley; Neuhauser, D.; Seismological Laboratory, University of California, Berkeley; McGill, P.; Monterey Bay Aquarium Research Institute; Uhrhammer, R.; Seismological Laboratory, University of California, Berkeley; Ramirez, T.; Monterey Bay Aquarium Research Institute

    2006-01-01

    We report on the installation of a long-term buried ocean-floor broadband seismic station (MOBB) in Monterey Bay, California (USA), 40km off-shore, at a water depth of 1000 m. The station was installed in April 2002 using a ship and ROV, in a collaborative effort between the Monterey Bay Aquarium Research Institute (MBARI) and the Berkeley Seismological Laboratory (BSL). The station is located on the western side of the San Gregorio Fault, a major fault in the San Andreas plate...

  7. The monterey bay broadband ocean bottom seismic observatory

    OpenAIRE

    R. Uhrhammer; McGill, P; Neuhauser, D; D. Dolenc; D. Stakes; B. Romanowicz; Ramirez, T.

    2006-01-01

    We report on the installation of a long-term buried ocean-floor broadband seismic station (MOBB) in Monterey Bay, California (USA), 40km off-shore, at a water depth of 1000 m. The station was installed in April 2002 using a ship and ROV, in a collaborative effort between the Monterey Bay Aquarium Research Institute (MBARI) and the Berkeley Seismological Laboratory (BSL). The station is located on the western side of the San Gregorio Fault, a major fault in the San Andreas plate boundary fault...

  8. Biogeochemical cycling of selenium in the San Joaquin Valley, California, USA

    Science.gov (United States)

    Presser, T.S.; Ohlendorf, H.M.

    1987-01-01

    Subsurface agricultural drainage waters from western San Joaquin Valley, California, were found to contain elevated concentrations of the element selenium in the form of selenate. In 1978, these drainage waters began to replace previous input to Kesterson Reservoir, a pond system within Kesterson National Wildlife Refuge; this substitution was completed by 1982. In the 1983 nesting season, unusual rates of deformity and death in embryos and hatchlings of wild aquatic birds (up to 64% of eared grebe and American coot nests) occurred at the refuge and were attributed to selenium toxicosis. Features necessary for contamination to have taken place included geologic setting, climate, soil type, availability of imported irrigation water, type of irrigation, and the unique chemical properties of selenium. The mechanisms of biogeochemical cycling raise questions about other ecosystems and human exposure.

  9. Benthic Oxygen Demand in Three Former Salt Ponds Adjacent to South San Francisco Bay, California

    Science.gov (United States)

    Topping, Brent R.; Kuwabara, James S.; Athearn, Nicole D.; Takekawa, John Y.; Parcheso, Francis; Henderson, Kathleen D.; Piotter, Sara

    2009-01-01

    Sampling trips were coordinated in the second half of 2008 to examine the interstitial water in the sediment and the overlying bottom waters of three shallow (average depth 2 meters). The water column at all deployment sites was monitored with dataloggers for ancillary water-quality parameters (including dissolved oxygen, salinity, specific conductance, temperature, and pH) to facilitate the interpretation of benthic-flux results. Calculated diffusive benthic flux of dissolved (0.2-micron filtered) oxygen was consistently negative (that is, drawn from the water column into the sediment) and ranged between -0.5 x 10-6 and -37 x 10-6 micromoles per square centimeter per second (site averages depicted in table 2). Assuming pond areas of 1.0, 1.4, and 2.3 square kilometers for ponds A16, A14, and A3W, respectively, this converts to an oxygen mass flux into the ponds' sediment ranging from -1 to -72 kilograms per day. Diffusive oxygen flux into the benthos (listed as negative) was lowest in pond A14 (-0.5 x 10-6 to -1.8 x 10-6 micromoles per square centimeter per second) compared with diffusive flux estimates for ponds A16 and A3W (site averages -26 x 10-6 to -35 x 10-6 and -34 x 10-6 to -37 x 10-6 micromoles per square centimeter per second, respectively). These initial diffusive-flux estimates are of the order of magnitude of those measured in the South Bay using core-incubation experiments (Topping and others, 2004), which include bioturbation and bioirrigation effects. Estimates of benthic oxygen demand reported herein, based on molecular diffusion, serve as conservative estimates of benthic flux because solute transport across the sediment-water interface can be enhanced by multidisciplinary processes including bioturbation, bioirrigation, ground-water advection, and wind resuspension (Kuwabara and others, 2009).

  10. Relationships between the stable isotopic signatures of living and fossil foraminifera in Monterey Bay, California

    Science.gov (United States)

    Martin, Jonathan B.; Day, Shelley A.; Rathburn, Anthony E.; Perez, M. Elena; Mahn, Chris; Gieskes, Joris

    2004-04-01

    Fossil foraminifera are critical to paleoceanographic reconstructions including estimates of past episodes of methane venting. These reconstructions rely on benthic foraminifera incorporating and retaining unaltered the ambient isotopic compositions of pore fluids and bottom waters. Comparisons are made here of isotopic compositions of abundant live and fossil foraminifera (Uvigerina peregrina, Epistominella pacifica, Bulimina mexicana, and Globobulimina pacifica) collected in Monterey Bay, CA from two cold seeps (Clam Flats and Extrovert Cliffs) and from sediments ˜5 m outside of the Clam Flats seep. Clam Flats has steep δ13CDIC gradients (to Extrovert Cliffs is less enriched in 12C (to approximately -22‰). Oxygen isotope values of fossil foraminifera at Clam Flats are ˜1.5‰ enriched in 18O over the living foraminifera, as well as those of both live and fossil foraminifera at Extrovert Cliffs, suggesting they may have lived during the last glacial maximum. Statistical comparisons (Student's t and Kolmogorov-Smirnov tests) of δ13C and δ18O values indicate that live and fossil foraminifera come from different populations at both Clam Flats and Extrovert Cliffs. At Clam Flats, the difference appears to result from alteration enriching some fossil foraminifera in 12C over live foraminifera. At Extrovert Cliffs, the fossil foraminifera are enriched in 13C over the live foraminifera, suggesting they lived prior to the onset of venting and thus that venting began recently. The short time of venting at Extrovert Cliffs may be responsible for the less alteration there compared with Clam Flats. These results indicate that preservation of foraminifera is likely to be poor within long-lived cold seeps, but that foraminifera living in the surrounding sediment may incorporate and preserve broad basin-wide changes in isotopic compositions of the ambient water.

  11. Three-dimensional P wave velocity model for the San Francisco Bay region, California

    Science.gov (United States)

    Thurber, Clifford H.; Brocher, Thomas M.; Zhang, Haijiang; Langenheim, Victoria E.

    2007-07-01

    A new three-dimensional P wave velocity model for the greater San Francisco Bay region has been derived using the double-difference seismic tomography method, using data from about 5,500 chemical explosions or air gun blasts and approximately 6,000 earthquakes. The model region covers 140 km NE-SW by 240 km NW-SE, extending from 20 km south of Monterey to Santa Rosa and reaching from the Pacific coast to the edge of the Great Valley. Our model provides the first regional view of a number of basement highs that are imaged in the uppermost few kilometers of the model, and images a number of velocity anomaly lows associated with known Mesozoic and Cenozoic basins in the study area. High velocity (Vp > 6.5 km/s) features at ˜15-km depth beneath part of the edge of the Great Valley and along the San Francisco peninsula are interpreted as ophiolite bodies. The relocated earthquakes provide a clear picture of the geometry of the major faults in the region, illuminating fault dips that are generally consistent with previous studies. Ninety-five percent of the earthquakes have depths between 2.3 and 15.2 km, and the corresponding seismic velocities at the hypocenters range from 4.8 km/s (presumably corresponding to Franciscan basement or Mesozoic sedimentary rocks of the Great Valley Sequence) to 6.8 km/s. The top of the seismogenic zone is thus largely controlled by basement depth, but the base of the seismogenic zone is not restricted to seismic velocities of ≤6.3 km/s in this region, as had been previously proposed.

  12. OSL and IRSL characteristics of quartz and feldspar from southern California, USA

    International Nuclear Information System (INIS)

    Southern California comprises of a wide range of diverse landscapes and environments, from high mountains with glacial and periglacial sediments to deserts with large sand dunes, extensive alluvial fans and ephemeral playas. Highly active tectonic processes has exposed ancient (c. 2 Ga) plutonic and metamorphic basement from deep within the crust, while similar Palaeozoic, Mesozoic and Cenozoic rocks are also common. A rich array of volcanic lithologies extending into the late Quaternary complement many thick sedimentary sequences that formed in equally diverse ancient environments typical of an accreting active continental margin. In some locations, notably in the Coachella Valley close to Palm Springs and the Salton Sea, low OSL sensitivity and poor characteristics restrict the application of the quartz SAR protocol to date late Pleistocene and Holocene fluvial sediments. In other locations such as the Malibu coastline, high sensitivity of the quartz OSL signal is observed, despite local source rocks being dominated by volcanic lithologies. Problems of poor quartz characteristics, along with uncertainty in predicting quartz OSL behavior for future dating campaigns poses a significant problem for projects, in particular for neotectonic contexts. While K-feldspar has been used extensively to date eolian and fluvial sediments in southern California, little information regarding signal stability is available. We explore the characteristics of both quartz and feldspar sub-samples from eolian, fluvial, lacustrine environments, in order to help develop mineral selection criteria for optical dating applications and clarify these issues. The importance of radiation quenching in quartz grains recently eroded from bedrock and the role of fires in enhancing OSL sensitivity are considered. The relative bleachability of quartz and feldspar fractions, along with thermal stability considerations is discussed. A simple test for quartz OSL signal contamination based on thermal

  13. Geology and mammalian paleontology of the Horned Toad Hills, Mojave Desert, California, USA

    Science.gov (United States)

    May, S.R.; Woodburne, M.O.; Lindsay, E.H.; Albright, L.B.; Sarna-Wojcicki, A.; Wan, E.; Wahl, D.B.

    2011-01-01

    The Horned Toad Formation includes five lithostratigraphic members that record alluvial fan, fluvial, lake margin, and lacustrine deposition within a relatively small basin just south of the active Garlock fault during the late Miocene to early Pliocene. These sediments experienced northwest-southeast contractional deformation during the Pliocene-Pleistocene associated with basement-involved reverse faults. Member Two of the Horned Toad Formation has yielded 24 taxa of fossil mammals, referred to as the Warren Local Fauna, including Cryptotis sp., cf. Scapanus, Hypolagus vetus, Hypolagus edensis,? Spermophilus sp., Prothomomys warrenensis n. gen., n. sp., Perognathus sp., Repomys gustelyi, Postcopemys valensis, Peromyscus sp. A, Peromyscus sp. B, Jacobsomys dailyi n. sp., Borophagus cf. B. secundus, cf. Agriotherium, Machairodus sp. cf. M. coloradensis, Rhynchotherium sp. cf. R. edensis, Pliomastodon vexillarius, Dinohippus edensis, Teleoceras sp. cf. T. fossiger, cf. Prosthennops, Megatylopus sp. cf. M. matthewi, Hemiauchenia vera, Camelidae gen. et. sp. indet., and the antilocaprid cf. Sphenophalos. The majority of fossil localities are confined to a 20 m thick stratigraphic interval within a reversed polarity magnetozone. The fauna demonstrates affinity with other late Hemphillian faunas from California, Nevada, Nebraska, Texas, and Mexico. The Lawlor Tuff, dated elsewhere in California at 4.83 ?? 0.04 Ma and geochemically identified in the Horned Toad Formation, overlies most of the fossil mammal localities. Magnetic polarity data are correlated with Chrons 3n.3r, 3n.3n, and 3n.2r, suggesting an age of approximately 5.0 - 4.6 Ma. These constraints indicate an age for the late Hemphillian Warren Local Fauna of 4.85 - 5.0 Ma. ?? Society of Vertebrate Paleontology November 2011.

  14. Metals and trace elements in giant garter snakes (Thamnophis gigas) from the Sacramento Valley, California, USA

    Science.gov (United States)

    Wylie, G.D.; Hothem, R.L.; Bergen, D.R.; Martin, L.L.; Taylor, R.J.; Brussee, B.E.

    2009-01-01

    The giant garter snake (GGS; Thamnophis gigas) is a federally listed threatened species endemic to wetlands of the Central Valley of California. Habitat destruction has been the main factor in the decline of GGS populations, but the effects of contaminants on this species are unknown. To contribute to the recovery of these snakes, the U.S. Geological Survey (USGS) began studies of the life history and habitat use of GGSs in 1995. During a series of investigations conducted from 1995 to the present, specimens of dead GGSs were opportunistically collected from the Colusa National Wildlife Refuge (CNWR), the Natomas Basin, and other sites in northern California. Whole snakes were stored frozen for potential future analysis. As funding became available, we analyzed tissues of 23 GGSs to determine the concentrations of total mercury (Hg) and other trace elements in livers and concentrations of Hg in brains and tail clips. Mercury concentrations (??g/g, wet weight) ranged from 0.08 to 1.64 in livers, 0.01 to 0.18 in brains, and 0.02 to 0.32 in tail clips. In livers, geometric mean concentrations (??g/g, dry weight) of arsenic (25.7) and chromium (1.02) were higher than most values from studies of other snakes. Mercury concentrations in tail clips were positively correlated with concentrations in livers and brains, with the most significant correlations occurring at the Natomas Basin and when Natomas and CNWR were combined. Results indicate the value of using tail clips as a nonlethal bioindicator of contaminant concentrations. ?? 2008 US Government.

  15. Fault rupture assessments for high-pressure pipelines in the southern San Francisco Bay area, California

    Energy Technology Data Exchange (ETDEWEB)

    Kelson, K.I.; Hitchcock, C.S.; Baldwin, J.N. [William Lettis and Associates, Walnut Creek, CA (United States); Hart, J.D. [SSD Inc., Reno NV (United States); Gamble, J.C.; Lee, C.H.; Dauby, F. [Pacific Gas and Electric Co., Walnut Creek, CA (United States)

    2004-07-01

    This study assessed the Pacific Gas and Electric Company natural gas transmission system in northern California in order to identify areas where primary pipelines cross major active faults in the region. The aim of the study was to develop measures for mitigating fault-rupture hazards during earthquakes. An innovative approach was developed to account for the reduction in expected surface displacement that occurs as a result of fault creep. Recently developed data on the distribution of displacement across fault zones was used to provide potential scenarios of seismic demand on the pipelines. The study identified primary, high-hazard fault crossings and delineated the location, width, and orientation of the active fault zone at specific fault-crossing sites. Expected surface fault displacements were characterized. The geotechnical soil conditions at fault crossings were evaluated. The expected amount of surface offset was modeled to reflect the distribution of offset across the fault zone. The model was based on data from historical surface ruptures throughout the world. Complex rupture distributions were used at sites where pipelines crossed multiple active fault strands. It was concluded that complex fault zones with multiple active strands can now be incorporated within mitigation designs using the new assessment technique. Uncertainties associated with geologic complexity will also be incorporated within the design. 17 refs., 8 figs.

  16. Nature of uranium contamination in the agricultural drainage water evaporation ponds of the San Joaquin Valley, California, USA

    International Nuclear Information System (INIS)

    Evaporation ponds used for agricultural subsurface drainage water disposal in the Tulare Lake Bed (TLB) of the San Joaquin Valley, California, USA have elevated levels of U. Waterfowl which inhabit and forage the ponds and surrounding areas are threatened by exposure to U. The ponds, which receive irrigation drainage waters and seasonal rain, are subject to wetting and drying periods. The periods result in the accumulation of decaying algae and other organic material in surface sediments. Sediment and waters in the ponds were sampled to determine what factors control U solubility and sediment U concentrations. Data from a 1990 study conducted by Chilcott et al. in 1989 on the TLB ponds were used to help identify what factors may control U solubility. Pond sediment U concentrations decreased abruptly with depth and surface sediment U concentrations were related to dissolved Ca:HCO3 ratios. Pond algal U bioaccumulation was favored in waters with high Ca:HCO3 ratios, which had lower pH values and carbonate alkalinities than waters with low CA:HCO3 ratios. Ponds with high salinities and high carbonate alkalinities contained the highest aqueous U concentrations relative to other TLB ponds. Sediment total organic carbon (TOC) was correlated with sediment U concentrations, suggesting that U is bound to organic matter. The source of TOC is most likely from algae deposition. (author)

  17. Polychlorinated biphenyls and toxaphene in Pacific tree frog tadpoles (Hyla regilla) from the California Sierra Nevada, USA.

    Science.gov (United States)

    Angermann, Jeffrey E; Fellers, Gary M; Matsumura, Fumio

    2002-10-01

    Pacific tree frog (Hyla regilla) tadpoles were collected throughout the Sierra Nevada mountain range, California, USA, in 1996 and 1997 and analyzed for the presence of polychlorinated biphenyls (PCBs) and toxaphene. Whole-tadpole sigma PCB levels ranged from 244 ng/g (wet wt) at lower elevations on the western slope to 1.6 ng/g high on the eastern slope, whereas sigma toxaphene levels ranged from 15.6 to 1.5 ng/g. Linear regression of PCB and toxaphene residue levels versus elevation indicated a significant relationship, with an r2 value of 0.33 for PCB and 0.45 for toxaphene indicating a significant elevation effect on PCB and toxaphene bioaccumulation in Sierra Nevada H. regilla. Tadpole samples from sites in east-facing versus west-facing drainage basins showed significant differences in PCB and toxaphene residue levels, suggesting the possibility of a rain-shadow effect in the long-range atmospheric transport of these contaminants to the Sierra Nevada Mountains. PMID:12371500

  18. Diel cycles of hydrogen peroxide in marine bathing waters in Southern California, USA: In situ surf zone measurements

    International Nuclear Information System (INIS)

    Hydrogen peroxide is photochemically produced in natural waters. It has been implicated in the oxidative-induced mortality of fecal indicator bacteria (FIB), a microbial water quality measure. To assess levels and cycling of peroxide in beach waters monitored for FIB, diel studies were carried out in surf zone waters in July 2009 at Crystal Cove State Beach, Southern California, USA. Maximum concentrations of 160-200 nM were obtained within 1 h of solar noon. Levels dropped at night to 20-40 nM, consistent with photochemical production from sunlight. Day-time production and night-time dark loss rates averaged 16 ± 3 nM h-1 and 12 ± 4 nM h-1 respectively. Apparent quantum yields averaged 0.07 ± 0.02. Production was largely dominated by sunlight, with some dependence on chromophoric dissolved organic matter (CDOM) levels in waters with high absorption coefficients. Peroxide levels measured here are sufficient to cause oxidative-stress-induced mortality of bacteria, affect FIB diel cycling and impact microbial water quality in marine bathing waters.

  19. Evapotranspiration rates and crop coefficients for a restored marsh in the Sacramento-San Joaquin Delta, California, USA

    Science.gov (United States)

    Drexler, J.Z.; Anderson, F.E.; Snyder, R.L.

    2008-01-01

    The surface renewal method was used to estimate evapotranspiration (ET) for a restored marsh on Twitchell Island in the Sacramento-San Joaquin Delta, California, USA. ET estimates for the marsh, together with reference ET measurements from a nearby climate station, were used to determine crop coefficients over a 3-year period during the growing season. The mean ET rate for the study period was 6 mm day-1, which is high compared with other marshes with similar vegetation. High ET rates at the marsh may be due to the windy, semi-arid Mediterranean climate of the region, and the permanently flooded nature of the marsh, which results in very low surface resistance of the vegetation. Crop coefficient (Kc) values for the marsh ranged from 0.73 to 1.18. The mean Kc value over the entire study period was 0-95. The daily Kc values for any given month varied from year to year, and the standard deviation of daily Kc values varied between months. Although several climate variables were undoubtedly responsible for this variation, our analysis revealed that wind direction and the temperature of standing water in the wetland were of particular importance in determining ET rates and Kc values.

  20. Variability and trends of ocean acidification in the Southern California Current System: A time series from Santa Monica Bay

    Science.gov (United States)

    Leinweber, A.; Gruber, N.

    2013-07-01

    We investigate the temporal variability and trends of pH and of the aragonite saturation state, Ωarag, in the southern California Current System on the basis of a 6 year time series from Santa Monica Bay, using biweekly observations of dissolved inorganic carbon and combined calculated and measured alkalinity. Median values of pH and Ωarag in the upper 20 m are comparable to observations from the subtropical gyres, but the temporal variability is at least a factor of 5 larger, primarily driven by short-term upwelling events and mesoscale processes. Ωarag and pH decrease rapidly with depth, such that the saturation horizon is reached already at 130 m, on average, but it occasionally shoals to as low as 30 m. No statistically significant linear trends emerge in the upper 100 m, but Ωarag and pH decrease, on average, at rates of -0.009±0.006 yr-1 and -0.004±0.003 yr-1 in the 100-250 m depth range. These are somewhat larger, but not statistically different from the expected trends based on the recent increase in atmospheric CO2. About half of the variability in the deseasonalized data can be explained by the El Niño Southern Oscillation, with warm phases (El Niño) being associated with above normal pH and Ωarag. The observed variability and trend in Ωarag and pH is well captured by a multiple linear regression model on the basis of a small number of readily observable independent variables. This permits the estimation of these variables for related sites in the region.

  1. Evaluating nonindigenous species management in a Bayesian networks derived relative risk framework for Padilla Bay, WA, USA.

    Science.gov (United States)

    Herring, Carlie E; Stinson, Jonah; Landis, Wayne G

    2015-10-01

    Many coastal regions are encountering issues with the spread of nonindigenous species (NIS). In this study, we conducted a regional risk assessment using a Bayesian network relative risk model (BN-RRM) to analyze multiple vectors of NIS introductions to Padilla Bay, Washington, a National Estuarine Research Reserve. We had 3 objectives in this study. The 1st objective was to determine whether the BN-RRM could be used to calculate risk from NIS introductions for Padilla Bay. Our 2nd objective was to determine which regions and endpoints were at greatest risk from NIS introductions. Our 3rd objective was to incorporate a management option into the model and predict endpoint risk if it were to be implemented. Eradication can occur at different stages of NIS invasions, such as the elimination of these species before being introduced to the habitat or removal of the species after settlement. We incorporated the ballast water treatment management scenario into the model, observed the risk to the endpoints, and compared this risk with the initial risk estimates. The model results indicated that the southern portion of the bay was at greatest risk because of NIS. Changes in community composition, Dungeness crab, and eelgrass were the endpoints most at risk from NIS introductions. The currents node, which controls the exposure of NIS to the bay from the surrounding marine environment, was the parameter that had the greatest influence on risk. The ballast water management scenario displayed an approximate 1% reduction in risk in this Padilla Bay case study. The models we developed provide an adaptable template for decision makers interested in managing NIS in other coastal regions and large bodies of water. PMID:25845995

  2. Effects of November 8, 1980 earthquake on Humboldt Bay Power Plant and Eureka, California area. Reconnaissance report 13 Nov-14 Nov 80

    International Nuclear Information System (INIS)

    On November 8, 1980, an earthquake of a reported surface wave magnitude of 7.0 occurred off the coast of California, west of Eureka and the Humboldt Bay Power Plant. Three NRC staff members visited the site the following week to survey any damage associated with the earthquake, with the objective of using collected data to assist the NRR staff in ongoing seismic evaluations of older operating nuclear power plant facilities. This report contains their observations. They concluded that the effects of the earthquake on Humboldt Bay Power Plant Unit 3 were minimal and did not endanger the health and safety of the public. They recommended that improvements be made to seismic recording equipment and that generic preparation for future post-earthquake reconnaissance trips be made before the actual occurrence of earthquakes

  3. Economic sustainability of a biomass energy project located at a dairy in California, USA

    International Nuclear Information System (INIS)

    Previous experience has demonstrated the tenuous nature of biomass energy projects located at livestock facilities in the U.S. In response, the economic sustainability of a 710 kW combined heat and power biomass energy system located on a dairy farm in California was evaluated. This biomass energy facility is unique in that a complete-mix anaerobic digester was used for treatment of manure collected in a flush-water system, co-digestates were used as additional digester feedstocks (whey, waste feed, and plant biomass), and the power plant is operating under strict regulatory requirements for stack gas emissions. Electricity was produced and sold wholesale, and cost savings resulted from the use of waste heat to offset propane demand. The impact of various operational factors was considered in the economic analysis, indicating that the system is economically viable as constructed but could benefit from introduction of additional substrates to increase methane and electricity production, additional utilization of waste heat, sale of digested solids, and possibly pursuing greenhouse gas credits. Use of technology for nitrogen oxide (NOx) removal had a minimal effect on economic sustainability. - Highlights: ► We evaluated the economic sustainability of a dairy biomass energy project. ► The project is economically sustainable as currently operated. ► The simple payback period could be reduced if the system is operated near capacity. ► Co-digestion of off-site waste streams is recommended to improve profitability.

  4. Spatially distributed pesticide exposure assessment in the Central Valley, California, USA

    International Nuclear Information System (INIS)

    Field runoff is an important transport mechanism by which pesticides move into the hydrologic environment of intensive agricultural regions such as California's Central Valley. This study presents a spatially explicit modeling approach to extend Pesticide Root Zone Model (PRZM), a field-scale pesticide transport model, into basin level. The approach was applied to simulate chlorpyrifos use in the Central Valley during 2003-2007. The average value of loading as percent of use (LAPU) is 0.031%. Results of this study provide strong evidence that surface runoff generation and pesticide application timing are the two influencing factors on the spatial and temporal variability of chlorpyrifos sources from agricultural fields. This is one of the first studies in coupling GIS and field-scale models and providing simulations for the dynamics of pesticides over an agriculturally dominated landscape. The demonstrated modeling approach may be useful for implementations of best management practice (BMP) and total maximum daily load (TMDL). - Runoff generation and application timing are governing factors on spatiotemporal variability of pesticide sources.

  5. Diets of three species of anurans from the cache creek watershed, California, USA

    Science.gov (United States)

    Hothem, R.L.; Meckstroth, A.M.; Wegner, K.E.; Jennings, M.R.; Crayon, J.J.

    2009-01-01

    We evaluated the diets of three sympatric anuran species, the native Northern Pacific Treefrog, Pseudacris regilla, and Foothill Yellow-Legged Frog, Rana boylii, and the introduced American Bullfrog, Lithobates catesbeianus, based on stomach contents of frogs collected at 36 sites in 1997 and 1998. This investigation was part of a study of mercury bioaccumulation in the biota of the Cache Creek Watershed in north-central California, an area affected by mercury contamination from natural sources and abandoned mercury mines. We collected R. boylii at 22 sites, L. catesbeianus at 21 sites, and P. regilla at 13 sites. We collected both L. catesbeianus and R. boylii at nine sites and all three species at five sites. Pseudacris regilla had the least aquatic diet (100% of the samples had terrestrial prey vs. 5% with aquatic prey), followed by R. boylii (98% terrestrial, 28% aquatic), and L. catesbeianus, which had similar percentages of terrestrial (81%) and aquatic prey (74%). Observed predation by L. catesbeianus on R. boylii may indicate that interaction between these two species is significant. Based on their widespread abundance and their preference for aquatic foods, we suggest that, where present, L. catesbeianus should be the species of choice for all lethal biomonitoring of mercury in amphibians. Copyright ?? 2009 Society for the Study of Amphibians and Reptiles.

  6. Comparing sediment equilibrium partitioning and passive sampling techniques to estimate benthic biota PCDD/F concentrations in Newark Bay, New Jersey (U.S.A.)

    International Nuclear Information System (INIS)

    Sediment and polyethylene sampler-based estimates of polychlorinated dibenzo-p-dioxin/dibenzofuran (PCDD/F) concentrations in Newark Bay, New Jersey (USA) benthic biota were compared. Biota concentrations based on sediment were estimated using an organic carbon (OC)-water partitioning model and an OC and black carbon (BC)-water dual model. Biota concentrations based on polyethylene were estimated from samplers deployed in the Newark Bay water column and samplers immersed in a sediment/porewater slurry in the laboratory. Porewater samplers provided the best estimates of biota concentrations (within 3.1×), with best results achieved for deposit-feeders (within 1.6×). Polyethylene deployed in deep water also provided good estimates of biota concentrations (within 4×). By contrast, OC-water partitioning overestimated biota concentrations by up to 7×, while OC and BC combined underestimated biota concentrations by up to 13×. We recommend passive samplers such as polyethylene for estimating concentrations of hydrophobic organic contaminants in field biota given its simplicity and relatively lower uncertainty compared to sediment equilibrium partitioning. -- Highlights: • PE samplers accurately estimate Newark Bay biota PCDD/F concentrations. • A traditional KOC partitioning model overestimated PCDD/F uptake by a factor of 4–7. • A dual KOC and KBC model underestimated biota PCDD/F uptake by a factor of 4–13. • Sediment- and depth-specific KBCs improved predictions of PCDD/F uptake. • Deposit feeder uptake switches from porewater control to ingestion at log KOW 6–7. -- Using polyethylene samplers to measure porewater concentrations is a more efficient approach for estimating site-specific bioavailable organic contaminants than equilibrium partitioning

  7. Seismotectonic Implications Of Clustered Regional GPS Velocities In The San Francisco Bay Region, California

    Science.gov (United States)

    Graymer, R. W.; Simpson, R.

    2012-12-01

    We have used a hierarchical agglomerative clustering algorithm with Euclidean distance and centroid linkage, applied to continuous GPS observations for the Bay region available from the U.S. Geological Survey website. This analysis reveals 4 robust, spatially coherent clusters that coincide with 4 first-order structural blocks separated by 3 major fault systems: San Andreas (SA), Southern/Central Calaveras-Hayward-Rodgers Creek-Maacama (HAY), and Northern Calaveras-Concord-Green Valley-Berryessa-Bartlett Springs (NCAL). Because observations seaward of the San Gregorio (SG) fault are few in number, the cluster to the west of SA may actually contain 2 major structural blocks not adequately resolved: the Pacific plate to the west of the northern SA and a Peninsula block between the Peninsula SA and the SG fault. The average inter-block velocities are 11, 10, and 9 mm/yr across SA, HAY, and NCAL respectively. There appears to be a significant component of fault-normal compression across NCAL, whereas SA and HAY faults appear to be, on regional average, purely strike-slip. The velocities for the Sierra Nevada - Great Valley (SNGV) block to the west of NCAL are impressive in their similarity. The cluster of these velocities in a velocity plot forms a tighter grouping compared with the groupings for the other cluster blocks, suggesting a more rigid behavior for this block than the others. We note that for 4 clusters, none of the 3 cluster boundaries illuminate geologic structures other than north-northwest trending dominantly strike-slip faults, so plate motion is not accommodated by large-scale fault-parallel compression or extension in the region or by significant plastic deformation , at least over the time span of the GPS observations. Complexities of interseismic deformation of the upper crust do not allow simple application of inter-block velocities as long-term slip rates on bounding faults. However, 2D dislocation models using inter-block velocities and typical

  8. An alkaline spring system within the Del Puerto ophiolite (California USA): A Mars analog site

    Energy Technology Data Exchange (ETDEWEB)

    Blank, J.G.; Green, S.; Blake, D.; Valley, J.; Kita, N.; Treiman, A.; Dobson, P.F.

    2008-10-01

    Mars appears to have experienced little compositional differentiation of primitive lithosphere, and thus much of the surface of Mars is covered by mafic lavas. On Earth, mafic and ultramafic rocks present in ophiolites, oceanic crust and upper mantle that have been obducted onto land, are therefore good analogs for Mars. The characteristic mineralogy, aqueous geochemistry, and microbial communities of cold-water alkaline springs associated with these mafic and ultramafic rocks represent a particularly compelling analog for potential life-bearing systems. Serpentinization, the reaction of water with mafic minerals such as olivine and pyroxene, yields fluids with unusual chemistry (Mg-OH and Ca-OH waters with pH values up to {approx}12), as well as heat and hydrogen gas that can sustain subsurface, chemosynthetic ecosystems. The recent observation of seeps from pole-facing crater and canyon walls in the higher Martian latitudes supports the hypothesis that even present conditions might allow for a rockhosted chemosynthetic biosphere in near-surface regions of the Martian crust. The generation of methane within a zone of active serpentinization, through either abiogenic or biogenic processes, could account for the presence of methane detected in the Martian atmosphere. For all of these reasons, studies of terrestrial alkaline springs associated with mafic and ultramafic rocks are particularly timely. This study focuses on the alkaline Adobe Springs, emanating from mafic and ultramafic rocks of the California Coast Range, where a community of novel bacteria is associated with the precipitation of Mg-Ca carbonate cements. The carbonates may serve as a biosignature that could be used in the search for evidence of life on Mars.

  9. A case history study on causation of the landslide in Santa Clara, California, USA

    Institute of Scientific and Technical Information of China (English)

    Yun Liao; Sadek M. Derrega; Craig A. Hall

    2015-01-01

    This paper presents a case history study on the geologic investigation and numerical modeling of a reactivated landslide in the County of Santa Clara, California to identify the failure mechanism. The landslide occurred on an approximately 18.3-m high, north-facing slope during March 2011. The land-slide measured about 33.5 m in width and about 51.8 m in length. Along the toe of the slope, a residential structure with a swimming pool was built on a cut and fill pad and there are several other structures present along the western side of the pad. The landslide occurred immediately to the south of the residential building and moved northward between the County Road A and the house’s side yard. The movement of the landslide resulted in damaging the west-bound traffic lane of County Road A and encroached onto the paved driveway for the residential property. An investigation was performed to identify the failure mechanism of the landslide to conclude whether Road A re-alignment by the County or prominent cutting performed along the lower portion of the slope by the homeowner during 2000 through 2004 contributed to the reactivation of the old landslide deposit. The investigation included site reconnaissance, reviewing available published geologic information, reviewing site-specific geologic and geotechnical data developed by other consultants, and performing numerical modeling. The outcomes of the investigation indicate that the primary causation for the reactivation and failure of the subject pre-existing landslide is the prominent cutting performed along the lower portion of the slope during 2000 through 2004 and water tank cut bench. The Road A re-alignment did not contribute to the reactivation of the old landslide deposit.

  10. Greenhouse gas emissions from alternative water supply processes in southern California, USA

    Science.gov (United States)

    Schneider, A.; Townsend-Small, A.

    2012-12-01

    Burgeoning population centers and declining hydrological resources have encouraged the development of alternative water treatment systems, including desalination and wastewater recycling. These processes currently provide potable water for millions of people and assist in satisfying agricultural and landscaping irrigation demands. There are a variety of alternative water production methods in place, and while they help to reduce the demands placed on aquifers, during their operation they are also significant sources of greenhouse gases. The environmental advantages of these alternative water production methods need to be carefully weighed against their energy footprints and greenhouse gas emissions profiles. This study measured the greenhouse gas emissions of a wastewater treatment and recycling facility in Orange County, California to get a more complete picture of the carbon footprint of the plant. We measured atmospheric emissions of CO2, CH4, and N2O throughout the water recycling process and at various times of the day and week. This allowed us to assemble a thorough, cross-sectional profile of greenhouse gas emissions from the facility. We then compared the measured emissions of the treatment plant to the modeled emissions of desalination plants in order to assess the relative carbon footprints of the two water production methods. Other water supply alternatives, including regional water importation, were also included in the comparison in order to provide a more complete understanding of the potential greenhouse gas emissions. Finally, we assessed the significance of wastewater treatment as an urban greenhouse gas source when compared to other known emissions in the region. This research offers a valuable tool for sustainable urban and regional development by providing planners with a quantified comparison of the carbon footprints of several water production options.

  11. BCDC Bay Trail Alignment 2009

    Data.gov (United States)

    California Department of Resources — The Bay Trail provides easily accessible recreational opportunities for outdoor enthusiasts, including hikers, joggers, bicyclists and skaters. It also offers a...

  12. A statistical learning framework for groundwater nitrate models of the Central Valley, California, USA

    Science.gov (United States)

    Nolan, Bernard T.; Fienen, Michael N.; Lorenz, David L.

    2015-01-01

    We used a statistical learning framework to evaluate the ability of three machine-learning methods to predict nitrate concentration in shallow groundwater of the Central Valley, California: boosted regression trees (BRT), artificial neural networks (ANN), and Bayesian networks (BN). Machine learning methods can learn complex patterns in the data but because of overfitting may not generalize well to new data. The statistical learning framework involves cross-validation (CV) training and testing data and a separate hold-out data set for model evaluation, with the goal of optimizing predictive performance by controlling for model overfit. The order of prediction performance according to both CV testing R2 and that for the hold-out data set was BRT > BN > ANN. For each method we identified two models based on CV testing results: that with maximum testing R2 and a version with R2 within one standard error of the maximum (the 1SE model). The former yielded CV training R2 values of 0.94–1.0. Cross-validation testing R2 values indicate predictive performance, and these were 0.22–0.39 for the maximum R2 models and 0.19–0.36 for the 1SE models. Evaluation with hold-out data suggested that the 1SE BRT and ANN models predicted better for an independent data set compared with the maximum R2 versions, which is relevant to extrapolation by mapping. Scatterplots of predicted vs. observed hold-out data obtained for final models helped identify prediction bias, which was fairly pronounced for ANN and BN. Lastly, the models were compared with multiple linear regression (MLR) and a previous random forest regression (RFR) model. Whereas BRT results were comparable to RFR, MLR had low hold-out R2 (0.07) and explained less than half the variation in the training data. Spatial patterns of predictions by the final, 1SE BRT model agreed reasonably well with previously observed patterns of nitrate occurrence in groundwater of the Central Valley.

  13. A statistical learning framework for groundwater nitrate models of the Central Valley, California, USA

    Science.gov (United States)

    Nolan, Bernard T.; Fienen, Michael N.; Lorenz, David L.

    2015-12-01

    We used a statistical learning framework to evaluate the ability of three machine-learning methods to predict nitrate concentration in shallow groundwater of the Central Valley, California: boosted regression trees (BRT), artificial neural networks (ANN), and Bayesian networks (BN). Machine learning methods can learn complex patterns in the data but because of overfitting may not generalize well to new data. The statistical learning framework involves cross-validation (CV) training and testing data and a separate hold-out data set for model evaluation, with the goal of optimizing predictive performance by controlling for model overfit. The order of prediction performance according to both CV testing R2 and that for the hold-out data set was BRT > BN > ANN. For each method we identified two models based on CV testing results: that with maximum testing R2 and a version with R2 within one standard error of the maximum (the 1SE model). The former yielded CV training R2 values of 0.94-1.0. Cross-validation testing R2 values indicate predictive performance, and these were 0.22-0.39 for the maximum R2 models and 0.19-0.36 for the 1SE models. Evaluation with hold-out data suggested that the 1SE BRT and ANN models predicted better for an independent data set compared with the maximum R2 versions, which is relevant to extrapolation by mapping. Scatterplots of predicted vs. observed hold-out data obtained for final models helped identify prediction bias, which was fairly pronounced for ANN and BN. Lastly, the models were compared with multiple linear regression (MLR) and a previous random forest regression (RFR) model. Whereas BRT results were comparable to RFR, MLR had low hold-out R2 (0.07) and explained less than half the variation in the training data. Spatial patterns of predictions by the final, 1SE BRT model agreed reasonably well with previously observed patterns of nitrate occurrence in groundwater of the Central Valley.

  14. Evaluation of Stream Loads Used to Calibrate a SPARROW Model for California, USA

    Science.gov (United States)

    Domagalski, J. L.; Saleh, D.

    2012-12-01

    A SPARROW (Spatially Referenced Regression on Watershed Attributes) Model is being developed for California. The model will be used to understand how Total Nitrogen (TN) and Total Phosphorus (TP) are transported from land to water from sources such as the atmosphere, fertilizer, soils, wastewater treatment facilities, etc., and relies on accurate calibration of mass loads obtained from water sampling at gauging stations in order to link mass at a location to upstream sources. Prior to input to the SPARROW model, the mass loads are calculated separately using a five-parameter log linear multi-regression model utilizing discharge, chemical measurements, time, and seasonal adjustments to obtain the best fit for the relationship of discharge and concentration. The gauging stations are situated in three ecological management zones as defined by the U.S. Environmental Protection Agency: the Western Forested Mountains, the Central Valley, and the Xeric West. Load models for nitrogen have at times been shown to be positively biased when the form of TN is predominately nitrate. The regions under study have different sources of nitrogen, which will affect the form of TN transported. Some stream segments are natural settings (forested), while others are highly influenced by agriculture and urban (Central Valley) settings and others by arid climate (Xeric). These differences affect the form of TN transported (dissolved as nitrate or suspended in the form of organic nitrogen), and hence it is expected that the efficiency of the discharge-load model may not be uniform at all locations. Less than 10% of the TN is in the form of nitrate in streams of the western forested mountains, but about 30% is nitrate in the Central Valley and about 40% in the arid region. Model efficiency was evaluated using the Nash Sutcliffe (NS) equation, which examines the square of the residuals of modeled results and observed values after transforming the logarithm of loads back to the actual data

  15. Evidence for long-range transport of a low to medium molecular-weight petroleum product off central California, USA

    International Nuclear Information System (INIS)

    Suspended particles collected within southern Santa Maria Basin (CA, USA) during November 1991 contained unusually elevated concentrations of parent and alkylated polycyclic aromatic hydrocarbons (PAHs) and patterns in straight chain alkanes and saturated biomarkers (terpanes and steranes) indicative of contamination by a distilled petroleum product from a California-sourced oil. Because no active offshore oil and gas drilling was occurring at the time, and there was no record of diesel spills or evidence from previous samplings of discharges of diesel fuel-contaminated drilling muds, petroleum hydrocarbons in the suspended sediments likely were related to a source other than platform discharges. The timing as well as the hydrocarbon composition suggested the presence of a petroleum product (diluent) that was released from an oil field at Guadalupe, approximately 50 km north of Santa Maria Basin. To evaluate diluent contributions, the hydrocarbon composition of suspended sediments were characterized and compared to those of possible source materials, including diluent, formation oils, and well cuttings, using principal component analysis (PCA). Suites of saturated and aromatic hydrocarbons, enriched in the C13 to C23 range, contained in some suspended sediments were consistent with relative abundances of low to medium molecular weight components in diluent but were different from those in formation and seep oils. Results of the PCA support the compositional similarities between the diluent and affected suspended sediments. This suggests that a petroleum product was transported as an oil-particle mixture over long distances with relatively minimal degradation. Wide dispersion of diluent increased potential exposures of marine organisms to toxic lower molecular weight PAHs

  16. Sources of high-chloride water and managed aquifer recharge in an alluvial aquifer in California, USA

    Science.gov (United States)

    O'Leary, David R.; Izbicki, John A.; Metzger, Loren F.

    2015-11-01

    As a result of pumping in excess of recharge, water levels in alluvial aquifers within the Eastern San Joaquin Groundwater Subbasin, 130 km east of San Francisco (California, USA), declined below sea level in the early 1950s and have remained so to the present. Chloride concentrations in some wells increased during that time and exceeded the US Environmental Protection Agency's secondary maximum contaminant level of 250 mg/L, resulting in removal of some wells from service. Sources of high-chloride water include irrigation return in 16 % of sampled wells and water from delta sediments and deeper groundwater in 50 % of sampled wells. Chloride concentrations resulting from irrigation return commonly did not exceed 100 mg/L, although nitrate concentrations were as high as 25 mg/L as nitrogen. Chloride concentrations ranged from less than 100-2,050 mg/L in wells affected by water from delta sediments and deeper groundwater. Sequential electromagnetic logs show movement of high-chloride water from delta sediments to pumping wells through permeable interconnected aquifer layers. δD and δ18O data show most groundwater originated as recharge along the front of the Sierra Nevada, but tritium and carbon-14 data suggest recharge rates in this area are low and have decreased over recent geologic time. Managed aquifer recharge at two sites show differences in water-level responses to recharge and in the physical movement of recharged water with depth related to subsurface geology. Well-bore flow logs also show rapid movement of water from recharge sites through permeable interconnected aquifer layers to pumping wells.

  17. Reach-scale channel sensitivity to multiple human activities and natural events: Lower Santa Clara River, California, USA

    Science.gov (United States)

    Downs, Peter W.; Dusterhoff, Scott R.; Sears, William A.

    2013-05-01

    Understanding the cumulative impact of natural and human influences on the sensitivity of channel morphodynamics, a relative measure between the drivers for change and the magnitude of channel response, requires an approach that accommodates spatial and temporal variability in the suite of primary stressors. Multiple historical data sources were assembled to provide a reach-scale analysis of the lower Santa Clara River (LSCR) in Ventura County, California, USA. Sediment supply is naturally high due to tectonic activity, earthquake-generated landslides, wildfires, and high magnitude flow events during El Niño years. Somewhat typically for the region, the catchment has been subject to four reasonably distinct land use and resource management combinations since European-American settlement. When combined with analysis of channel morphological response (quantifiable since ca. 1930), reach-scale and temporal differences in channel sensitivity become apparent. Downstream reaches have incised on average 2.4 m and become narrower by almost 50% with changes focused in a period of highly sensitive response after about 1950 followed by forced insensitivity caused by structural flood embankments and a significant grade control structure. In contrast, the middle reaches have been responsive but are morphologically resilient, and the upstream reaches show a mildly sensitive aggradational trend. Superimposing the natural and human drivers for change reveals that large scale stressors (related to ranching and irrigation) have been replaced over time by a suite of stressors operating at multiple spatial scales. Lower reaches have been sensitive primarily to 'local' scale impacts (urban growth, flood control, and aggregate mining) whereas, upstream, catchment-scale influences still prevail (including flow regulation and climate-driven sediment supply factors). These factors illustrate the complexity inherent to cumulative impact assessment in fluvial systems, provide evidence for a

  18. Occurrence patterns of Black-backed Woodpeckers in green forest of the Sierra Nevada Mountains, California, USA.

    Directory of Open Access Journals (Sweden)

    Alissa M. Fogg

    2014-12-01

    Full Text Available Black-backed Woodpeckers (Picoides arcticus are a rare habitat specialist typically found in moderate and high severity burned forest throughout its range. It also inhabits green forest but little is known about occurrence and habitat use patterns outside of burned areas, especially in the Sierra Nevada of California, USA. We used point count and playback surveys to detect Black-backed Woodpeckers during 2011 - 2013 on 460 transects on 10 national forest units. We defined green forest as areas that had not burned at moderate or high severity since 1991 and were more than 2 km from areas burned at moderate or high severity within the previous eight years (n = 386 transects. We used occupancy models to examine green forest habitat associations and found positive relationships with elevation, latitude, northern aspects, number of snags, tree diameter, lodgepole pine (Pinus contorta forest, and a negative relationship with slope. Estimated occupancy in green forest was higher than previously understood (0.21. In addition site colonization and extinction probability in green forest were low (0.05 and 0.19, respectively and suggest that many of the individuals detected in green forest were not just actively dispersing across the landscape in search of burned areas, but were occupying relatively stable home ranges. The association with high elevation and lodgepole pine forest may increase their exposure to climate change as these elevation forest types are predicted to decrease in extent over the next century. Although density is high in burned forest, green forest covers significantly more area in the Sierra Nevada and should be considered in efforts to conserve this rare species.

  19. Does prescribed fire promote resistance to drought in low elevation forests of the Sierra Nevada, California, USA?

    Science.gov (United States)

    van Mantgem, Phillip J.; Caprio, Anthony C.; Stephenson, Nathan L.; Das, Adrian J.

    2016-01-01

    Prescribed fire is a primary tool used to restore western forests following more than a century of fire exclusion, reducing fire hazard by removing dead and live fuels (small trees and shrubs).  It is commonly assumed that the reduced forest density following prescribed fire also reduces competition for resources among the remaining trees, so that the remaining trees are more resistant (more likely to survive) in the face of additional stressors, such as drought.  Yet this proposition remains largely untested, so that managers do not have the basic information to evaluate whether prescribed fire may help forests adapt to a future of more frequent and severe drought.During the third year of drought, in 2014, we surveyed 9950 trees in 38 burned and 18 unburned mixed conifer forest plots at low elevation (<2100 m a.s.l.) in Kings Canyon, Sequoia, and Yosemite national parks in California, USA.  Fire had occurred in the burned plots from 6 yr to 28 yr before our survey.  After accounting for differences in individual tree diameter, common conifer species found in the burned plots had significantly reduced probability of mortality compared to unburned plots during the drought.  Stand density (stems ha-1) was significantly lower in burned versus unburned sites, supporting the idea that reduced competition may be responsible for the differential drought mortality response.  At the time of writing, we are not sure if burned stands will maintain lower tree mortality probabilities in the face of the continued, severe drought of 2015.  Future work should aim to better identify drought response mechanisms and how these may vary across other forest types and regions, particularly in other areas experiencing severe drought in the Sierra Nevada and on the Colorado Plateau.

  20. Present-day oxidative subsidence of organic soils and mitigation in the Sacramento-San Joaquin Delta, California, USA

    Science.gov (United States)

    Deverel, Steven J.; Ingrum, Timothy; Leighton, David

    2016-05-01

    Subsidence of organic soils in the Sacramento-San Joaquin Delta threatens sustainability of the California (USA) water supply system and agriculture. Land-surface elevation data were collected to assess present-day subsidence rates and evaluate rice as a land use for subsidence mitigation. To depict Delta-wide present-day rates of subsidence, the previously developed SUBCALC model was refined and calibrated using recent data for CO2 emissions and land-surface elevation changes measured at extensometers. Land-surface elevation change data were evaluated relative to indirect estimates of subsidence and accretion using carbon and nitrogen flux data for rice cultivation. Extensometer and leveling data demonstrate seasonal variations in land-surface elevations associated with groundwater-level fluctuations and inelastic subsidence rates of 0.5-0.8 cm yr-1. Calibration of the SUBCALC model indicated accuracy of ±0.10 cm yr-1 where depth to groundwater, soil organic matter content and temperature are known. Regional estimates of subsidence range from 1.8 cm yr-1. The primary uncertainty is the distribution of soil organic matter content which results in spatial averaging in the mapping of subsidence rates. Analysis of leveling and extensometer data in rice fields resulted in an estimated accretion rate of 0.02-0.8 cm yr-1. These values generally agreed with indirect estimates based on carbon fluxes and nitrogen mineralization, thus preliminarily demonstrating that rice will stop or greatly reduce subsidence. Areas below elevations of -2 m are candidate areas for implementation of mitigation measures such as rice because there is active subsidence occurring at rates greater than 0.4 cm yr-1.

  1. Insights into the establishment of the Manila clam on a tidal flat at the southern end of an introduced range in Southern California, USA.

    Directory of Open Access Journals (Sweden)

    Drew M Talley

    Full Text Available Coastal ecosystem modifications have contributed to the spread of introduced species through alterations of historic disturbance regimes and resource availability, and increased propagule pressure. Frequency of occurrence of the Manila clam (Venerupis phillipinarum, Veneridae in Southern California estuaries has increased from absent or sparse to common since the mid-1990s. Potential invasion vectors include seafood sales and aquaculture, and spread from established northern populations over decades. The clam's post-settlement habitat preferences are, however, uncertain in this region. Our project aimed to identify factors associated with established patches of the clam within a bay toward the southern end of this introduced range. During summer 2013, we sampled 10 tidal flat sites in Mission Bay, San Diego; each containing an area with and without hard structure (e.g., riprap, boulders. We measured likely environmental influences (e.g., sediment variables, distance to ocean. Manila clam densities across the bay were most strongly associated with site, where highest densities were located in the northern and/or back halves of the bay; and weakly correlated with lower porewater salinities. Within sites, Manila clam density was enhanced in the presence of hard structure in most sites. Prevailing currents and salinity regimes likely contribute to bay wide distributions, while hard structures may provide suitable microhabitats (refuge from predators and physical stress and larval entrapment within sites. Results provide insights into decisions about future shoreline management efforts. Finally, we identify directions for future study to better understand and therefore predict patterns of establishment of the Manila clam in the southern portion of its introduced range.

  2. Impact of Late Holocene climate variability and anthropogenic activities on Biscayne Bay (Florida, U.S.A.): evidence from diatoms

    Science.gov (United States)

    Wachnicka, Anna; Gaiser, Evelyn; Wingard, Lynn; Briceño, Henry; Harlem, Peter

    2013-01-01

    Shallow marine ecosystems are experiencing significant environmental alterations as a result of changing climate and increasing human activities along coasts. Intensive urbanization of the southeast Florida coast and intensification of climate change over the last few centuries changed the character of coastal ecosystems in the semi-enclosed Biscayne Bay, Florida. In order to develop management policies for the Bay, it is vital to obtain reliable scientific evidence of past ecological conditions. The long-term records of subfossil diatoms obtained from No Name Bank and Featherbed Bank in the Central Biscayne Bay, and from the Card Sound Bank in the neighboring Card Sound, were used to study the magnitude of the environmental change caused by climate variability and water management over the last ~ 600 yr. Analyses of these records revealed that the major shifts in the diatom assemblage structures at No Name Bank occurred in 1956, at Featherbed Bank in 1966, and at Card Sound Bank in 1957. Smaller magnitude shifts were also recorded at Featherbed Bank in 1893, 1942, 1974 and 1983. Most of these changes coincided with severe drought periods that developed during the cold phases of El Niño Southern Oscillation (ENSO), Atlantic Multidecadal Oscillation (AMO) and Pacific Decadal Oscillation (PDO), or when AMO was in warm phase and PDO was in the cold phase. Only the 1983 change coincided with an unusually wet period that developed during the warm phases of ENSO and PDO. Quantitative reconstructions of salinity using the weighted averaging partial least squares (WA-PLS) diatom-based salinity model revealed a gradual increase in salinity at the three coring locations over the last ~ 600 yr, which was primarily caused by continuously rising sea level and in the last several decades also by the reduction of the amount of freshwater inflow from the mainland. Concentration of sediment total nitrogen (TN), total phosphorus (TP) and total organic carbon (TOC) increased in the

  3. A Case History of the Science and Management Collaboration in Understanding Hypoxia Events in Long Bay, South Carolina, USA

    Science.gov (United States)

    Sanger, Denise; Hernandez, Debra; Libes, Susan; Voulgaris, George; Davis, Braxton; Smith, Erik; Shuford, Rebecca; Porter, Dwayne; Koepfler, Eric; Bennett, Joseph

    2010-09-01

    Communication of knowledge between the scientific and management communities is a difficult process complicated by the distinctive nature of professional career goals of scientists and decision-makers. This article provides a case history highlighting a collaboration between the science and management communities that resulted from a response to a 2004 hypoxia, or low dissolved oxygen, event in Long Bay, off Myrtle Beach, South Carolina. A working group of scientists and decision-makers was established at the time of the event and has continued to interact to develop a firm understanding of the drivers responsible for hypoxia formation in Long Bay. Several factors were found to be important to ensure that these collaborative efforts were productive: (1) genuine interest in collaboratively working across disciplines to examine a problem; (2) commitment by agency leadership, decision-makers, and researchers to create successful communication mechanisms; (3) respect for each others’ perspectives and an understanding how science and management are performed and that they are not mutually exclusive; (4) networking among researchers and decision-makers to ensure appropriate team members are involved in the process; (5) use of decision-maker input in the formulation of research and monitoring projects; and (6) commitment of resources for facilitation to ensure that researchers and decision-makers are communicating effectively.

  4. MONT95C - Bathymetry contours of the southern Monterey Bay area between Moss Landing and Monterey, California

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — The bathymetric grids and derived contours are from data collected by the USGS with a multibeam (Simrad EM1000) sidescan sonar system in the southern Monterey Bay...

  5. Environmental Sensitivity Index (ESI) Atlas: San Francisco Bay, California maps and geographic information systems data (NODC Accession 0013224)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set comprises the Environmental Sensitivity Index (ESI) maps for the shoreline of San Francisco Bay. ESI data characterize estuarine environments and...

  6. South San Francisco Bay tidal marsh vegetation and elevation surveys-Corkscrew Marsh, Bird Island, and Palo Alto Baylands, California, 1983

    Science.gov (United States)

    Orlando, James L.; Drexler, Judy Z.; Dedrick, Kent G.

    2005-01-01

    Changes in the topography and ecology of the San Francisco Bay Estuary ('Estuary') during the past 200 years have resulted in the loss of nearly 80 percent of the historical salt marsh in the region. Currently, numerous projects are being undertaken by federal, state, and local governments in an attempt to restore wetland habitat and ecosystem function at a number of locations within the Estuary. Much information is needed concerning the historical topographic and ecologic characteristics of the Estuary to facilitate these restoration efforts. This report presents previously unpublished vegetation and elevation data collected in 1983 by the California State Lands Commission at Corkscrew marsh, Bird Island, and Palo Alto Baylands, all located in South San Francisco Bay. These precise and detailed elevation and plant surveys represent a snapshot of South Bay flora before invasion by the Atlantic smooth cordgrass, Spartina alterniflora. Such precise elevation data are rare for relatively undisturbed marshes in the San Francisco Bay; publication of these historical data may facilitate wetland restoration efforts. Marsh-surface and tidal-channel elevations were determined at a total of 962 stations by differential leveling to established tidal benchmark stations at each site and referenced to Mean Lower Low Water (MLLW) relative to the National Tidal Datum Epoch (1960-78). In addition, presence or absence of nine salt marsh species, percentage plant cover, and percentage bare soil were recorded for 1-square meter quadrats at 648 stations where elevations were determined. Collectively, over the three sites, salt marsh vegetation ranged in elevation from 0.98 to 2.94 m above MLLW. S. foliosa and Salicornia virginica were the most frequently observed plant species. Atriplex patula, Deschampsia cespitosa, and Limonium californicum were each recorded at only one of the three sites.

  7. Serum Biomarkers of Polyfluoroalkyl Compound Exposure in Young Girls in Greater Cincinnati and the San Francisco Bay Area, USA

    OpenAIRE

    Pinney, Susan M.; Biro, Frank M; Windham, Gayle; Herrick, Robert L.; Yaghjyan, Lusine; Calafat, Antonia M.; Succop, Paul; Sucharew, Heidi; Ball, Kathleen M.; Kato, Kayoko; Kushi, Lawrence H.; Bornschein, Robert

    2013-01-01

    PFC serum concentrations were measured in 6–8 year-old girls in Greater Cincinnati (GC) (N=353) and the San Francisco Bay Area (SFBA) (N=351). PFOA median concentration was lower in the SFBA than GC (5.8 vs. 7.3 ng/mL). In GC, 48/51 girls living in one area had PFOA concentrations above the NHANES 95th percentile for children 12–19 years (8.4 ng/mL), median 22.0 ng/mL. The duration of being breast fed was associated with higher serum PFOA at both sites and with higher PFOS, PFHxS and Me-PFOSA...

  8. Serum biomarkers of polyfluoroalkyl compound exposure in young girls in Greater Cincinnati and the San Francisco Bay Area, USA

    International Nuclear Information System (INIS)

    PFC serum concentrations were measured in 6–8 year-old girls in Greater Cincinnati (GC) (N = 353) and the San Francisco Bay Area (SFBA) (N = 351). PFOA median concentration was lower in the SFBA than GC (5.8 vs. 7.3 ng/mL). In GC, 48/51 girls living in one area had PFOA concentrations above the NHANES 95th percentile for children 12–19 years (8.4 ng/mL), median 22.0 ng/mL. The duration of being breast fed was associated with higher serum PFOA at both sites and with higher PFOS, PFHxS and Me-PFOSA-AcOH concentrations in GC. Correlations of the PFC analytes with each other suggest that a source upriver from GC may have contributed to exposures through drinking water, and water treatment with granular activated carbon filtration resulted in less exposure for SWO girls compared to those in NKY. PFOA has been characterized as a drinking water contaminant, and water treatment systems effective in removing PFCs will reduce body burdens. -- Highlights: • PFC serum concentrations were measured in 6–8 year-old girls. • Study sites in Greater Cincinnati (N = 353) and the San Francisco Bay Area (N = 351). • The duration of being breast fed was associated with higher serum PFOA. • Lower PFOA in girls living in areas with granular activated carbon water treatment. -- Serum concentrations of PFCs in young girls were higher in girls who had been breast fed longer, and lower in girls in areas with granular activated carbon municipal water treatment

  9. Investigating the Sources and Dynamics of Dissolved Organic Matter in an Agricultural Watershed in California (U.S.A.)

    Science.gov (United States)

    Dyda, R. Y.; Hernes, P. J.; Spencer, R. G.; Ingrum, T. D.; Pellerin, B. A.; Bergamaschi, B. A.

    2007-12-01

    Dissolved organic matter (DOM) is ubiquitous and plays critical roles in nutrient cycling, aquatic food webs and numerous other biogeochemical processes. Furthermore, various factors control the quality and quantity of DOM, including land use, soil composition, in situ production, microbial uptake and assimilation and hydrology. As a component of DOM, dissolved organic carbon (DOC) has been recently identified as a drinking water constituent of concern due to its propensity to form EPA-regulated carcinogenic compounds when disinfected for drinking water purposes. Therefore, understanding the sources, cycling and modification of DOC across various landscapes is of direct relevance to a wide range of studies. The Willow Slough watershed is located in the Central Valley of California (U.S.A.) and is characterized by both diverse geomorphology as well as land use. The watershed drains approximately 425 km2 and is bordered by Cache and Putah Creeks to the north and south. The study area in the watershed includes the eastern portion of the foothills of the inner Coast Range and the alluvial plain and encompasses diverse land uses, including orchards, viticulture, dairy, pasture and natural grasslands. The Willow Slough watershed represents a unique opportunity to examine DOC dynamics through multiple land uses and hydrologic flow paths that are common throughout California. Preliminary data show that DOC concentrations at the watershed mouth peak during winter storms and also increase gradually throughout the summer months during the agricultural irrigation season. The increasing DOC concentrations during the summer months may result from agricultural runoff and/or primary production in channel. In addition, initial results using the chromophoric DOM (CDOM) absorption coefficient and spectral slope parameters indicate seasonal differences in the composition of the DOM. Spectral slopes decreased during both the summer irrigation season and winter storms relative to winter

  10. Sulfur, carbon, and oxygen isotope variations in submarine hydrothermal deposits of Guaymas Basin, Gulf of California, USA

    Science.gov (United States)

    Peter, J.M.; Shanks, Wayne C., III

    1992-01-01

    Sulfur, carbon, and oxygen isotope values were measured in sulfide, sulfate, and carbonate from hydrothermal chimney, spire, and mound samples in the southern trough of Guaymas Basin, Gulf of California, USA. ??34S values of sulfides range from -3.7 to 4.5%. and indicate that sulfur originated from several sources: 1. (1) dissolution of 0??? sulfide contained within basaltic rocks, 2. (2) thermal reduction of seawater sulfate during sediment alteration reactions in feeder zones to give sulfide with positive ??34S, and 3. (3) entrainment or leaching of isotopically light (negative-??34S) bacteriogenic sulfide from sediments underlying the deposits. ??34S of barite and anhydrite indicate sulfur derivation mainly from unfractionated seawater sulfate, although some samples show evidence of sulfate reduction and sulfide oxidation reactions during mixing within chimneys. Oxygen isotope temperatures calculated for chimney calcites are in reasonable agreement with measured vent fluid temperatures and fluid inclusion trapping temperatures. Hydrothermal fluids that formed calcite-rich chimneys in the southern trough of Guaymas Basin were enriched in 18O with respect to seawater by about 2.4??? due to isotopic exchange with sedimentary and/or basaltic rocks. Carbon isotope values of calcite range from -9.6 to -14.0??? ??34CpDB, indicating that carbon was derived in approximately equal quantities from the dissolution of marine carbonate minerals and the oxidation of organic matter during migration of hydrothermal fluid through the underlying sediment column. Statistically significant positive, linear correlations of ??34S, ??34C, and ??18O of sulfides and calcites with geographic location within the southern trough of Guaymas Basin are best explained by variations in water/rock ( w r) ratios or sediment reactivity within subsurface alteration zones. Low w r ratios and the leaching of detrital carbonates and bacteriogenic sulfides at the southern vent sites result in relatively

  11. The effects of raking on sugar pine mortality following prescribed fire in Sequoia and Kings Canyon National Parks, California, USA

    Science.gov (United States)

    Nesmith, Jonathan C. B.; O'Hara, Kevin L.; van Mantgem, Phillip J.; de Valpine, Perry

    2010-01-01

    Prescribed fire is an important tool for fuel reduction, the control of competing vegetation, and forest restoration. The accumulated fuels associated with historical fire exclusion can cause undesirably high tree mortality rates following prescribed fires and wildfires. This is especially true for sugar pine (Pinus lambertiana Douglas), which is already negatively affected by the introduced pathogen white pine blister rust (Cronartium ribicola J.C. Fisch. ex Rabenh). We tested the efficacy of raking away fuels around the base of sugar pine to reduce mortality following prescribed fire in Sequoia and Kings Canyon national parks, California, USA. This study was conducted in three prescribed fires and included 457 trees, half of which had the fuels around their bases raked away to mineral soil to 0.5 m away from the stem. Fire effects were assessed and tree mortality was recorded for three years after prescribed fires. Overall, raking had no detectable effect on mortality: raked trees averaged 30% mortality compared to 36% for unraked trees. There was a significant effect, however, between the interaction of raking and average pre-treatment forest floor fuel depth: the predicted probability of survival of a 50 cm dbh tree was 0.94 vs. 0.96 when average pre-treatment fuel depth was 0 cm for a raked and unraked tree, respectively. When average pre-treatment forest floor fuel depth was 30 cm, the predicted probability of survival for a raked 50 cm dbh tree was 0.60 compared to only 0.07 for an unraked tree. Raking did not affect mortality when fire intensity, measured as percent crown volume scorched, was very low (0% scorch) or very high (>80% scorch), but the raking treatment significantly increased the proportion of trees that survived by 9.6% for trees that burned under moderate fire intensity (1% to 80% scorch). Raking significantly reduced the likelihood of bole charring and bark beetle activity three years post fire. Fuel depth and anticipated fire intensity need

  12. Geotechnical Extreme Events Reconnaissance Report on the Performance of Structures in Densely Urbanized Areas Affected by Surface Fault Rupture During the August 24, 2014 M6 South Napa Earthquake, California, USA.

    Science.gov (United States)

    Cohen-Waeber, J.; Lanzafame, R.; Bray, J.; Sitar, N.

    2014-12-01

    The August 24, 2014, M­w 6.0 South Napa earthquake is the largest seismic event to have occurred in the San Francisco Bay Region, California, USA, since the Mw 6.9 1989 Loma Prieta earthquake. The event epicenter occurred at the South end of the Napa Valley, California, principally rupturing northwest along parts of the active West Napa fault zone. Bound by two major fault zones to the East and West (Calaveras and Rogers Creek, respectively), the Napa Valley is filled with up to 170 m. of alluvial deposits and is considered to be moderately to very highly susceptible to liquefaction and has the potential for violent shaking. While damage due to strong ground shaking was significant, remarkably little damage due to liquefaction or landslide induced ground deformations was observed. This may be due to recent drought in the region. Instead, the South Napa earthquake is the first to produce significant surface rupture in this area since the Mw 7.9 1906 San Andreas event, and the first in Northern California to rupture through a densely urbanized environment. Clear expressions of surface fault rupture extended approximately 12 - 15 km northward from the epicenter and approximately 1-2 km southeast with a significant impact to infrastructure, including roads, lifelines and residential structures. The National Science Foundation funded Geotechnical Extreme Events Reconnaissance (GEER) Association presents here its observations on the performance of structures affected by surface fault rupture, in a densely populated residential neighborhood located approximately 10 km north of the epicenter. Based on the detailed mapping of 27 residential structures, a preliminary assessment of the quantitative descriptions of damage shows certain characteristic interactions between surface fault rupture and the overlying infrastructure: 48% of concrete slabs cracked up to 8 cm wide, 19% of structures shifted up to 11 cm off of their foundation and 44% of foundations cracked up to 3 cm

  13. Perfluoroalkyl compounds in relation to life-history and reproductive parameters in bottlenose dolphins (Tursiops truncatus) from Sarasota Bay, Florida, U.S.A.

    Science.gov (United States)

    Houde, Magali; Balmer, Brian C; Brandsma, Sicco; Wells, Randall S; Rowles, Teri K; Solomon, Keith R; Muir, Derek C G

    2006-09-01

    Perfluoroalkyl compounds (PFCs) were determined in plasma, milk, and urine of free-ranging bottlenose dolphins (Tursiops truncatus) from Sarasota Bay (FL, USA) during three winter and two summer capture-and-release programs (2002-2005). Plasma and urine samples were extracted using an ion-pairing method. Perfluoroalkyl compounds were extracted from milk samples using acetonitrile, and extracts were cleaned with graphitized nonporous carbon. All extracts were analyzed by high-performance liquid chromatography-tandem mass spectrometry. Mean seasonal sum of PFCs (sigma PFCs) detected in dolphin plasma ranged from 530 to 927 ng/g wet weight. No significant differences (p > 0.05) were found in concentrations between seasons, suggesting a constant exposure to PFCs. Overall, blubber thickness of dolphins did not correlate with PFC concentrations in plasma, suggesting an absence of PFC sequestration in blubber. Sexually immature calves (age, dolphins. Results from the present study showed that young and developing bottlenose dolphins are highly exposed to PFCs. These chemicals also were detected in urine (mean sigma PFCs, 26.6 +/- 79 ng/g wet wt), indicating that the urinary system is an important pathway of PFC depuration in dolphins. PMID:16986796

  14. Near-Surface Structure of the Peninsula Segment of the San Andreas Fault, San Francisco Bay Area, California

    Science.gov (United States)

    Rosa, C.; Catchings, R.; Rymer, M. J.; Goldman, M.; Grove, K.; Prentice, C. S.

    2013-12-01

    The peninsula segment of the San Andreas Fault (SAF) is a section of the fault that has the potential to produce the next large earthquake in the San Francisco Bay Area, yet the slip history of the peninsula segment is relatively unknown. In most places, the surface location of the SAF has been determined primarily on the basis of geomorphic features and from mapping surface ruptures associated with the 1906 M7.9 San Francisco earthquake. To more precisely locate traces of the SAF along the San Francisco peninsula in the subsurface, we acquired a high-resolution seismic imaging survey, using both seismic refraction and reflection profiling, south of Upper Crystal Springs Reservoir near Woodside, California in June 2012. We acquired coincident P- and S-wave data using a 60-channel seismograph system connected via cable to 40-Hz vertical-component and 4-Hz horizontal-component geophones, with spacing at 1-m intervals along a 60-m-long transect across the SAF. Seismic sources (shots) were generated by hammer impacts on a steel plate or aluminum block at each geophone location. All shots were recorded on all channels. This survey design permitted simultaneous acquisition of reflection and refraction data such that both refraction tomography and reflection images were developed. Analysis of the P- and S-wave data, using refraction tomography, shows abrupt variations in the P-wave (Vp) and S-wave (Vs) velocities, including the 1,500 m/s velocity contour that outlines the top to groundwater and images of Vp/Vs and Poisson's ratios. P-wave velocities range from about 700 m/s at the surface to more than 4000 m/s at 20-m depth. S-wave velocities range from about 300 m/s at the surface to about 800 m/s at 20-m depth. The combined data indicate that the near-surface trace of the SAF dips steeply to the southwest in the upper few tens of meters. Variations in the velocity images also suggest the possibility of two additional near-surface fault traces within about 25 m of the

  15. Delineating incised stream sediment sources within a San Francisco Bay tributary basin

    OpenAIRE

    Bigelow, Paul; Benda, Lee; Pearce, Sarah

    2016-01-01

    Erosion and sedimentation pose ubiquitous problems for land and watershed managers, requiring delineation of sediment sources and sinks across landscapes. However, the technical complexity of many spatially explicit erosion models precludes their use by practitioners. To address this critical gap, we demonstrate a contemporary use of applied geomorphometry through a straightforward GIS analysis of sediment sources in the San Francisco Bay Area in California, USA, designed to support erosion r...

  16. Geogenic metal mobility in a coastal inlet impacted by cannery discharge, Magdalena Bay, Baja California Sur, Mexico.

    Science.gov (United States)

    O'Shea, Beth; Capistrano, Christian; Lee, William

    2016-08-15

    Magdalena Bay is an important habitat for marine organisms, some of which have been the subject of metal bioaccumulation studies. Cannery waste is discharged into the bay providing a plausible source of contamination but this study finds that some metals occur geogenically. Bay sediments and rocks (n=59) were analyzed for total metals and clustered (HCA) into two distinct groups with PCA indicating concentrations of Cr, Cu, Mn, and Ni influenced samples near ophiolite outcrops, which reported some metal concentrations exceeding averages in the crust by an order of magnitude (up to 4450ppm Cr and 1269ppm Ni). Metals at the cannery are rarely elevated above crustal averages except Zn (max. 160ppm), however, acid-extracted Zn was below recommended sediment quality guidelines in contrast to 80% of ophiolitic samples reporting Ni extractability exceeding such guidelines. This study raises awareness of geogenic metals when considering sources of contamination in marine environments. PMID:27251444

  17. Environmental Sensitivity Index (ESI) Atlas: Central California (Including Monterey Bay Sanctuary), maps and geographic information systems data (NODC Accession 0013176)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Environmental Sensitivity Index (ESI) maps have been developed for the coastal areas of Central California from Point Conception to Point Reyes National Seashore....

  18. Tidal Marsh Stratigraphy, Sea-Level Change and Large EARTHQUAKES—II: Submergence Events during the Last 3500 Years at Netarts Bay, Oregon, USA

    Science.gov (United States)

    Shennan, I.; Long, A. J.; Rutherford, M. M.; Innes, J. B.; Green, F. M.; Walker, K. J.

    This is the second investigation where we apply the methods and scientific framework common to sea-level investigations in northwest Europe to test a model of coseismic land subsidence followed by land uplift during interseismic strain accumulation, used to explain alternating peat-mud couplets of late Holocene age found in many of the estuaries of the Pacific Northwest of the USA and Canada. Recent studies in this region interpret such couplets as the product of repeated large (magnitude 8 or 9) earthquakes on the Cascadia subduction zone. Stratigraphic investigations of the intertidal sediments at Netarts Bay, Oregon, using lithological, pollen and diatom analyses reveal different types of submergence associated with peat-mud couplets during the last 3500 yr. Three peat-mud couplets record gradual sedimentation changes within an infilling body of water. Four other couplets record rapid submergence, burial of tidal marshes and their replacement by low marsh environments. In three of the events rapid submergence is small, 0-0.5 m. The most recent marsh submergence event, around AD 1700, was 0.4±0.3 m. Most of the buried peats contain microfossil evidence for a gradual increase in marine influence before the rapid change from organic to minerogenic sedimentation. Similar gradual changes are common in comparable palaeoenvironments on non-seismic coasts and are strong evidence against a simple interseismic strain accumulation-coseismic subsidence model. One hypothesis is that the gradual increase in marine influence before each submergence represents pre-seismic relative sea-level rise caused by a reduction in the rate of land uplift. The microfossil analyses provide evidence of three stages within an earthquake deformation cycle: coseismic subsidence; interseismic land uplift; and pre-seismic reduction in the rate of land uplift. At present the microfossil data do not differentiate between rapid post-seismic land uplift and rapid sedimentation.

  19. More than a century of bathymetric observations and present-day shallow sediment characterization in Belfast Bay, Maine, USA: Implications for pockmark field longevity

    Science.gov (United States)

    Brothers, L.L.; Kelley, J.T.; Belknap, D.F.; Barnhardt, W.A.; Andrews, B.D.; Maynard, M.L.

    2011-01-01

    Mechanisms and timescales responsible for pockmark formation and maintenance remain uncertain, especially in areas lacking extensive thermogenic fluid deposits (e.g., previously glaciated estuaries). This study characterizes seafloor activity in the Belfast Bay, Maine nearshore pockmark field using (1) three swath bathymetry datasets collected between 1999 and 2008, complemented by analyses of shallow box-core samples for radionuclide activity and undrained shear strength, and (2) historical bathymetric data (report and smooth sheets from 1872, 1947, 1948). In addition, because repeat swath bathymetry surveys are an emerging data source, we present a selected literature review of recent studies using such datasets for seafloor change analysis. This study is the first to apply the method to a pockmark field, and characterizes macro-scale (>5 m) evolution of tens of square kilometers of highly irregular seafloor. Presence/absence analysis yielded no change in pockmark frequency or distribution over a 9-year period (1999-2008). In that time pockmarks did not detectably enlarge, truncate, elongate, or combine. Historical data indicate that pockmark chains already existed in the 19th century. Despite the lack of macroscopic changes in the field, near-bed undrained shear-strength values of less than 7 kPa and scattered downcore 137Cs signatures indicate a highly disturbed setting. Integrating these findings with independent geophysical and geochemical observations made in the pockmark field, it can be concluded that (1) large-scale sediment resuspension and dispersion related to pockmark formation and failure do not occur frequently within this field, and (2) pockmarks can persevere in a dynamic estuarine setting that exhibits minimal modern fluid venting. Although pockmarks are conventionally thought to be long-lived features maintained by a combination of fluid venting and minimal sediment accumulation, this suggests that other mechanisms may be equally active in

  20. Organic composition of PM 2.5 and size-segregated aerosols and their sources during the 2002 Bay Regional Atmospheric Chemistry Experiment (BRACE), Florida, USA

    Science.gov (United States)

    Tremblay, Raphaël T.; Riemer, Daniel D.; Zika, Rod G.

    PM 2.5 and size-segregated aerosols were collected in May 2002 as part of the Bay Regional Atmospheric Chemistry Experiment (BRACE), Florida, USA. Aerosol organic composition was used to estimate sources of a series of alkanes and polycyclic aromatic hydrocarbons (PAHs) using chemical indices, hierarchical cluster analysis (HCA) and a chemical mass balance receptor model (CMB). Aerosols were collected on quartz fiber filters (QFF) using a PM 2.5 high volume sampler and on aluminum foil discs using a Micro-Orifice Uniform Deposit Impactor (MOUDI, 50% aerodynamic cut diameters were 18, 10, 5.6, 3.2, 1.8, 1.0, 0.56, 0.315 and 0.171 μm). Target compounds included alkanes and PAHs and were solvent extracted using a mixture of dichloromethane, acetone and hexane, concentrated and then analyzed using a gas chromatograph/mass spectrometer (GC/MS). The target compounds in PM 2.5 were dominated by six sources during the study period: mobile sources (39±5%), coal burning (33±5%), biogenic primary emission (20±2%), oil combustion (5±2%), biomass burning (1.0±0.3%) and an unidentified source (3±2%). Results obtained from the chemical indices, HCA and CMB were in very good agreement with each other. PAH size distributions are presented for days dominated by a same source. Seventy-five percent and 50% of the PAH were found below 1.8 and 0.56 μm, respectively (monthly PAH geometric diameters averaged 0.43 μm). Coarse size PAHs were observed on 1 day (15 May) and were correlated with nitrate and sodium size distribution. It is hypothesized that the PAHs, sodium and nitrate were internally mixed and that the PAHs deposited onto a pre-existing marine aerosol. This transfer process has significant implications for PAH deposition and lifetime and warrants further study.

  1. Polybrominated diphenyl ether flame retardants in Chesapeake Bay region, U.S.A., peregrine falcon (Falco peregrinus) eggs: urban/rural trends.

    Science.gov (United States)

    Potter, Katherine E; Watts, Bryan D; La Guardia, Mark J; Harvey, Ellen P; Hale, Robert C

    2009-05-01

    A total of 23 peregrine falcon (Falco peregrinus) eggs were obtained between 1993 and 2002 from 13 nests, encompassing 11 locations in the Chesapeake Bay region, U.S.A. When multiple eggs were available from the same clutch, average clutch contaminant concentrations were calculated. An overall median total polybrominated diphenyl ether (PBDE) level of 201 ng/g wet weight was determined for the eggs/clutches examined. The maximum in an individual egg, from an urban highway bridge site, was 354 ng/g. This egg also exhibited the highest BDE 209 burden (48.2 ng/g). Compared to distributions reported in fish and piscivorous birds, falcon eggs were enriched in the more brominated congeners. The BDE congeners 153, 99, and 100 constituted 26.0, 24.8, and 13.1%, respectively, of total PBDEs. In most aquatic species, BDE 47 is the most abundant congener reported; however, it constituted only 4.4% of total PBDEs in the eggs of the present study. The median BDE 209 concentration was 6.3 ng/g. The sum of the octa- to nonabrominated congeners (BDEs 196, 197, 206, 207, and 208) contributed, on average, 14.0% of total PBDEs, exceeding the contribution of BDE 209 (5.9%). Concentrations of polychlorinated biphenyls (PCBs) and 1,1-dichloro-2,2-bis(p-chlorophenyl)ethylene (4,4'-DDE) also were determined in a subset of 16 eggs (collected in 2001-2002 from six nests) and were an order of magnitude greater than the corresponding PBDEs. Median BDE 209 concentrations were significantly correlated (p < 0.01, Spearman R = 0.690) with the human population density of the area surrounding the nest. Total PBDEs, total PCBs, and 4,4'-DDE levels were not correlated to human population density. PMID:19102579

  2. Evergreen sclerophyllous Quercus forests in northwestern Yunnan, China as compared to the Mediterranean evergreen Quercus forests in California, USA and northeastern Spain

    Directory of Open Access Journals (Sweden)

    C. Q. Tang

    2006-12-01

    Full Text Available Evergreen sclerophyllous Quercus forests in NW Yunnan (China were studied and compared with the Mediterranean evergreen sclerophyllous Quercus forests in central coastal California (USA and Catalonia (NE Spain. Forests of Q. aquifolioides, Q. pannosa, Q. longispica of NW Yunnan, Q. agrifolia of California and Q. ilex of NE Spain were analyzed as representative communities. The similarities and differences at the community level in the contemporary vegetation of the sclerophyllous Quercus forest found in the three regions are clarified. The general patterns of the evergreen Quercus forest in the three regions were similar, though different assemblages of species were involved. The species diversity in all three regions was rather low. The species richness did not significantly differ among the forests, although in the Q. longispica forest it is somewhat higher than the others. The three representative species of evergreen Quercus in NW Yunnan reached the greatest maximum height, while Q. agrifolia of California had the largest basal area per ha. The Q. ilex forest of Spain had the lowest values for maximum tree height and dbh and the highest density per ha. Frequency of dbh size classes indicated that Q. aquifolioides, Q. pannosa, and Q. agrifolia had potentially good regeneration of the sporadic type with highest values for the intermediate size classes, and the regeneration of Q. longispica and Q. ilex was strong as indicated by a reverse-J pattern. Still, in each area, most regeneration was from sprouting. In all three regions the evergreen Quercus species have adapted to environmental changes, for instance by development of sprouting and rooting abilities to resist drought, cold conditions and various disturbances. The evergreen Quercus forests in NW Yunnan were structurally more similar to the Q. agrifolia forest of central coastal California than to the Q. ilex forest of NE Spain.

  3. Evaluating Ambient Concentrations and Local Emissions of Greenhouse Gases (GHGs) in the San Francisco Bay Area of California Using a Comprehensive Fixed-site and Mobile Monitoring Network

    Science.gov (United States)

    Guha, A.; Bower, J. P.; Martien, P. T.; Randall, S.; Young, A.; Hilken, H.; Stevenson, E.

    2015-12-01

    The Bay Area Air Quality Management District (hence the Air District) is the greater San Francisco Bay metropolitan region's chief air quality regulatory agency. Aligning itself with Executive Order S-3-05, the Air District has set a goal to reduce the region's GHG emissions by 80% below 1990 levels by the year 2050. The Air District's 10-point Climate Action Work Program lays out the agency's priorities, actions and coordination with regional stakeholders. The Program has three core objectives: (1) to develop a technical and monitoring program to document the region's GHG sources and related emissions, (2) to implement a policy and rule-based approach to control and regulate GHG emissions, and finally, (3) to utilize local governance, incentives and partnerships to encourage GHG emissions reductions.As part of the technical program, the Air District has set up a long term, ambient GHG monitoring network at four sites. The first site is located north and upwind of the urban core at Bodega Bay by the Pacific Coast. It mostly receives clean marine inflow and serves as the regional background site. The other three sites are strategically located at regional exit points for Bay Area plumes that presumably contain GHG enhancements from local sources. These stations are at San Martin, located south of the San Jose metropolitan area; at Patterson Pass at the cross section with California's Central Valley; and at Bethel Island at the mouth of the Sacramento-San Joaquin Delta. At all sites, carbon dioxide (CO2) and methane (CH4) are being measured continuously, along with combustion tracer CO and other air pollutants. The GHG measurements are performed with high precision and fast laser instruments (Picarro Inc). In the longer term, the network will allow the Air District to monitor ambient concentrations of GHGs and thus evaluate the effectiveness of its policy, regulation and enforcement efforts. We present data from the sites in their first few months of operation and

  4. A Two-Generation Study of Body Mass Index, Energy Balance and Specific Physical Activity of College Students and Their Respective Parents Living in the Same Household at Los Angeles, California, U.S.A.

    Science.gov (United States)

    Liang, Ying; Lee, Judy; Tam, Chick F.; Bridges, Elizabeth; Keating, Xiaofen D.

    2007-01-01

    The purpose was to compare the differences in body mass index (BMI), energy balance (EB) and specific physical activity (SPA) between 30 CSULA college students (Y) and their respective parents (O) living in the same household at Los Angeles, California, U.S.A. Each student completed a 24-hour dietary record with SPA journal, and the same for…

  5. Community composition, structure, and interrelationships in the marine intertidal Endocladia muricata – Balanus glandula association in Monterey Bay, California

    NARCIS (Netherlands)

    Glynn, Peter W.

    1965-01-01

    Studies of the community composition, structure and species interrelationships of the Endocladia-Balanus association were carried out on the rocky shores at the Hopkins Marine Station, Pacific Grove, California, over the period 1959—1961. The organisms making up this biotic association form a horizo

  6. Dissolved Oxygen in Guadalupe Slough and Pond A3W, South San Francisco Bay, California, August and September 2007

    Science.gov (United States)

    Shellenbarger, Gregory; Schoellhamer, David H.; Morgan, Tara L.; Takekawa, John Y.; Athearn, Nicole D.; Henderson, Kathleen D.

    2008-01-01

    Initial restoration of former salt evaporation ponds under the South Bay Salt Pond Restoration Project in San Francisco Bay included the changing of water-flow patterns and the monitoring of water quality of discharge waters from the ponds. Low dissolved oxygen (DO) concentrations became evident in discharge waters when the ponds first were opened in 2004. This was a concern, because of the potential for low-DO pond discharge to decrease the DO concentrations in the sloughs that receive water from the ponds. However, as of summer 2007, only limited point-measurements of DO concentrations had been made in the receiving sloughs adjacent to the discharge ponds. In this report, we describe two short studies aimed at understanding the natural variability of slough DO and the effect of pond discharge on the DO concentrations in the sloughs. Pond A3W (a discharge pond) and the adjacent Guadalupe Slough were instrumented in August and September 2007 to measure DO, temperature, conductivity, and pH. In addition, Mowry and Newark Sloughs were instrumented during the August study to document DO variability in nearby sloughs that were unaffected by pond discharge. The results showed that natural tidal variability in the slough appeared to dominate and control the slough DO concentrations. Water-quality parameters between Guadalupe Slough and Mowry and Newark Sloughs could not be directly compared because deployment locations were different distances from the bay. Pond-discharge water was identified in Guadalupe Slough using the deployed instruments, but, counter to the previous assumption, the pond discharge, at times, increased DO concentrations in the slough. The effects of altering the volume of pond discharge were overwhelmed by natural spring-neap tidal variability in the slough. This work represents a preliminary investigation by the U.S. Geological Survey of the effects of pond discharge on adjacent sloughs, and the results will be used in designing a comprehensive DO

  7. Benthic macroinvertebrates as indicators of biological condition below hydropower dams on west slope Sierra Nevada streams, California, USA

    Science.gov (United States)

    Over 50 hydropower dams in California will undergo relicensing by the Federal Energy Regulatory Commission (FERC) in the next 15 years. An interpretive framework for biological data collected by relicensing studies is lacking. This study developed a multi-metric index of biotic...

  8. Accumulation pattern of organochlorine pesticides and polychlorinated biphenyls in sourthern sea otters (Enhydra lutris nereis) found stranded along coastal California, USA

    Science.gov (United States)

    Nakata, H.; Kannan, K.; Jing, L.; Thomas, N.J.; Tanabe, S.; Giesy, J.P.

    1998-01-01

    Concentrations of PCBs, DDTs (p,p'-DDE, p,p'-DDD and p,p'-DDT), HCHs (α-, β-, γ-isomers), chlordanes (trans-chlordane, cis-chlordane, trans-nonachlor, cis-nonachlor and oxychlordane) and HCB (hexachlorobenzene were measured in liver, kidney and brain tissues of adult southern sea otters (Enhydra lutris nereis) found stranded along coastal California, USA, during 1992–96. The contamination pattern of organochlorines in sea otters from several locations was in the order of DDTs > PCBs > > CHLs > HCHs > > HCB, whereas those from Monterey Harbor contained greater concentrations of PCBs than of DDTs. Hepatic concentrations of PCBs and DDTs were in the ranges of 58–8700 and 280–5900 ng/g, wet weight, respectively, which varied depending on the geographic location. Sea otters collected from Monterey Harbor contained the greatest concentrations of PCBs and DDTs. In general, accumulation of DDTs, CHLs and PCBs was greater in kidney than in liver, whereas that of HCHs was similar in both the tissues. The gender difference in organochlorine concentrations was less than those reported in cetaceans. The composition of DDTs, HCHs and CHLs compounds in sea otter tissues indicated no recent inputs of these compounds in coastal California. Sea otters that died from infectious diseases, neoplasia and emaciation contained higher concentrations of DDTs than those that died from trauma.

  9. Undoing Gender Through Legislation and Schooling: the Case of AB 537 and AB 394 IN California, USA

    Science.gov (United States)

    Knotts, Greg

    2009-11-01

    This article investigates California laws AB 537: The Student Safety and Violence Prevention Act of 2000, and the recently enacted AB 394: Safe Place to Learn Act. Both demand that gender identity and sexual orientation be added to the lexicon of anti-harassment protection in public education. However, despite these progressive measures, schools have an unconscious acceptance of heteronormativity and gendered norms, which undermines both the spirit and language of these laws. This paper examines how California schools can both change standard practices and realise the transformative social change that laws like AB 537 and AB 394 can instigate. I assert that the systemic implementation of these laws, through the adoption, enforcement and evaluation of existing AB 537 Task Force Recommendations, is necessary for their success. My second assertion is that AB 537 and AB 394 have the potential to change and reconstitute gender-based and heteronormative standards at school sites.

  10. Fluid origin, gas fluxes and plumbing system in the sediment-hosted Salton Sea Geothermal System (California, USA)

    OpenAIRE

    Mazzini, A.; Physics of Geological Processes, University of Oslo, Sem Sælandsvei 24, Box 1048, 0316 Oslo, Norway; Svensen, H.; Physics of Geological Processes, University of Oslo, Sem Sælandsvei 24, Box 1048, 0316 Oslo, Norway; Etiope, G.; Istituto Nazionale di Geofisica e Vulcanologia, Sezione Roma2, Roma, Italia; Onderdonk, N.; Department of Geological Sciences, California State University, Long Beach, 1250 Bellflower Blvd., Long Beach, CA 90840, USA; Banks, D.; School of Earth and Environment, University of Leeds, Leeds, LS2 9JT, UK

    2011-01-01

    The Salton Sea Geothermal System (California) is an easily accessible setting for investigating the interactions of biotic and abiogenic geochemical processes in sediment-hosted hydrothermal systems. We present new temperature data and the molecular and isotopic composition of fluids seeping at the Davis-Schrimpf seep field during 2003–2008. Additionally, we show the first flux data for CO2 and CH4 released throughout the field from focused vents and diffuse soil degassing. The...

  11. A Re-Evaluation of the Size of the White Shark (Carcharodon carcharias) Population off California, USA

    OpenAIRE

    Burgess, George H; Barry D Bruce; Cailliet, Gregor M.; Goldman, Kenneth J.; Dean Grubbs, R.; Lowe, Christopher G.; M Aaron MacNeil; Mollet, Henry F.; Weng, Kevin C.; John B O'Sullivan

    2014-01-01

    White sharks are highly migratory and segregate by sex, age and size. Unlike marine mammals, they neither surface to breathe nor frequent haul-out sites, hindering generation of abundance data required to estimate population size. A recent tag-recapture study used photographic identifications of white sharks at two aggregation sites to estimate abundance in "central California" at 219 mature and sub-adult individuals. They concluded this represented approximately one-half of the total abundan...

  12. Composition of modern sand from the Sierra Nevada, California, USA: Implications for actualistic petrofacies of continental-margin magmatic arcs

    OpenAIRE

    Ingersoll, Raymond V.; Eastmond, Daniel J.

    2007-01-01

    The Sierra Nevada of California represents the roots of a long-lived magmatic arc (primarily Cretaceous) that is presently being dissected as the range is uplifted, beginning in the south and progressing northward. This dissection is occurring concurrently with northward migration of the Mendocino triple junction, south of which magmatic-arc activity is absent, and north of which magmatic-arc activity continues. A north-to-south transect along the Sierra Nevada represents transitions of activ...

  13. Oribatid Mite Community Decline Two Years after Low-Intensity Burning in the Southern Cascade Range of California, USA

    OpenAIRE

    Nancy E. Gillette; Karen L. Lamoncha; Michael A. Camann

    2012-01-01

    To assess effects of low-intensity fire, we combined two silvicultural prescriptions with prescribed fire in the California Cascade Range. In the first treatment, two 100-ha stands were thinned to reduce density while retaining old-growth structural characteristics, yielding residual stands with high structural diversity (HSD). Two other 100-ha plots were thinned to minimize old growth structure, producing even-aged stands of low structural diversity (LSD), and one 50-ha split-plot from each ...

  14. Fire disturbance, forest structure, and stand dynamics in montane forests of the southern Cascades, Thousand Lakes Wilderness, California, USA

    OpenAIRE

    Bekker, Matthew F.; Alan H Taylor

    2010-01-01

    We examined tree diameter, age structure, and successional trends in 100 montane forest plots to identify the effects of variation in the return interval, severity, and extent of fires on forest structure and dynamics in the southern Cascade Range, California. We classified 100 forest plots into 8 groups based on stand structural characteristics. Median point fire return intervals were shortest in lower montane mixed conifer and Jeffrey pine–white fir stands (13-25 y) and upper montane red fi...

  15. ECOLOGIC DRIVERS AND POPULATION IMPACTS OF AVIAN TRICHOMONOSIS MORTALITY EVENTS IN BAND-TAILED PIGEONS (PATAGIOENAS FASCIATA) IN CALIFORNIA, USA.

    OpenAIRE

    Rogers, KH; Girard, YA; Koenig, WD; Johnson, CK

    2016-01-01

    Avian trichomonosis, a disease typically caused by the protozoan parasite Trichomonas gallinae , is a well recognized cause of death in many avian species. In California, trichomonosis has caused periodic epidemics in Pacific Coast Band-tailed Pigeons ( Patagioenas fasciata monilis). We summarize reported mortality events and investigate ecologic drivers and population impacts associated with epidemic mortality due to trichomonosis in Band-tailed Pigeons. Between 1945 and 2014, 59 mortality e...

  16. Placing the 2012-2015 California-Nevada drought into a paleoclimatic context: Insights from Walker Lake, California-Nevada, USA

    Science.gov (United States)

    Hatchett, Benjamin J.; Boyle, Douglas P.; Putnam, Aaron E.; Bassett, Scott D.

    2015-10-01

    Assessing regional hydrologic responses to past climate changes can offer a guide for how water resources might respond to ongoing and future climate change. Here we employed a coupled water balance and lake evaporation model to examine Walker Lake behaviors during the Medieval Climate Anomaly (MCA), a time of documented hydroclimatic extremes. Together, a 14C-based shoreline elevation chronology, submerged subfossil tree stumps in the West Walker River, and regional paleoproxy evidence indicate a ~50 year pluvial episode that bridged two 140+ year droughts. We developed estimates of MCA climates to examine the transient lake behavior and evaluate watershed responses to climate change. Our findings suggest the importance of decadal climate persistence to elicit large lake-level fluctuations. We also simulated the current 2012-2015 California-Nevada drought and found that the current drought exceeds MCA droughts in mean severity but not duration.

  17. Data from theodolite measurements of creep rates on San Francisco Bay region faults, California, 1979-2012

    Science.gov (United States)

    McFarland, Forrest S.; Lienkaemper, James J.; Caskey, S. John

    2009-01-01

    Our purpose is to annually update our creep-data archive on San Francisco Bay region active faults for use by the scientific research community. Earlier data (1979-2001) were reported in Galehouse (2002) and were analyzed and described in detail in a summary report (Galehouse and Lienkaemper, 2003). A complete analysis of our earlier results obtained on the Hayward Fault was presented in Lienkaemper, Galehouse and Simpson (2001) and updated in Lienkaemper and others (2012). Lienkaemper and others (2014a) provide a new overview and analysis of fault creep along all sections of the northern San Andreas Fault system, from which they estimate by how much fault creep reduces the seismic hazard for each fault section.

  18. Mismatch Between Interseismic Ground Deformation and Paleoseismic/Paleogeodetic Observations, Humboldt Bay, Northern California, Cascadia Subduction Zone

    Science.gov (United States)

    Patton, J. R.; Williams, T. B.; Leroy, T. H.; Anderson, J. K.; Weldon, R. J.; Gilkerson, W.

    2011-12-01

    Observations made by Plafker in Chile (1960) and Alaska (1964) show that vertical deformation during earthquakes is generally opposite in sense of motion compared to interseismic deformation. This elastic rebound theory drives estimates of potential coseismic deformation on the Cascadia subduction zone (CSZ). Similar to other coastal marshes along the CSZ, paleoseismic investigations around Humboldt Bay reveal evidence of coseismic subsidence for the past 4 ka. Tide gage data obtained from NOAA tide gages, as well as 'campaign' style tide gages, are used to infer interseismic ground deformation. Tide gage data from Crescent City and Humboldt Bay are compared to each other and also compared to estimates of eustatic sea-level rise to estimate rates of land-level change. Earthscope and USGS GPS permanent site data are also used to evaluate vertical interseismic deformation in this region. These rates of land-level change are then compared to paleoseismic proxies for vertical land-level change. Cores collected for master's theses research at Humboldt State University were used to compile an earthquake history for the Humboldt Bay region. Some cores in Mad River and Hookton sloughs were used to evaluate magnitudes of coseismic subsidence by comparing diatom and foraminiferid assemblages associated with lithologic contacts (paleogeodesy). Minimum estimates of paleosubsidence for earthquakes range from 0.3 to 2.6 meters. Subtracting eustatic sea-level rise (~2.3 mm/yr, 1977-2010) from Crescent City (CC) and North Spit (NS) relative sea-level rates reveals that CC is uplifting at ~3mm/yr and NS is subsiding at ~2.5 mm/yr. GPS vertical deformation reveals similar rates of ~3 mm/yr of uplift and ~2 mm/yr of subsidence in these two locations. GPS based subsidence rates show a gradient of subsidence between Trinidad (in the north) to Cape Mendocino (in the south). The spatial region of ongoing subsidence reveals the depth of locking of the CSZ fault (differently from previous

  19. State Emergency Response and Field Observation Activities in California (USA) during the March 11, 2011, Tohoku Tsunami

    Science.gov (United States)

    Miller, K. M.; Wilson, R. I.; Goltz, J.; Fenton, J.; Long, K.; Dengler, L.; Rosinski, A.; California Tsunami Program

    2011-12-01

    This poster will present an overview of successes and challenges observed by the authors during this major tsunami response event. The Tohoku, Japan tsunami was the most costly to affect California since the 1964 Alaskan earthquake and ensuing tsunami. The Tohoku tsunami caused at least $50 million in damage to public facilities in harbors and marinas along the coast of California, and resulted in one fatality. It was generated by a magnitude 9.0 earthquake which occurred at 9:46PM PST on Thursday, March 10, 2011 in the sea off northern Japan. The tsunami was recorded at tide gages monitored by the West Coast/Alaska Tsunami Warning Center (WCATWC), which projected tsunami surges would reach California in approximately 10 hours. At 12:51AM on March 11, 2011, based on forecasted tsunami amplitudes, the WCATWC placed the California coast north of Point Conception (Santa Barbara County) in a Tsunami Warning, and the coast south of Point Conception to the Mexican border in a Tsunami Advisory. The California Emergency Management Agency (CalEMA) activated two Regional Emergency Operation Centers (REOCs) and the State Operation Center (SOC). The California Geological Survey (CGS) deployed a field team which collected data before, during and after the event through an information clearinghouse. Conference calls were conducted hourly between the WCATWC and State Warning Center, as well as with emergency managers in the 20 coastal counties. Coordination focused on local response measures, public information messaging, assistance needs, evacuations, emergency shelters, damage, and recovery issues. In the early morning hours, some communities in low lying areas recommended evacuation for their citizens, and the fishing fleet at Crescent City evacuated to sea. The greatest damage occurred in the harbors of Crescent City and Santa Cruz. As with any emergency, there were lessons learned and important successes in managing this event. Forecasts by the WCATWC were highly accurate

  20. Pesticide occurrence and aquatic benchmark exceedances in urban surface waters and sediments in three urban areas of California, USA, 2008-2011.

    Science.gov (United States)

    Ensminger, Michael P; Budd, Robert; Kelley, Kevin C; Goh, Kean S

    2013-05-01

    Urban pesticide use has a direct impact on surface water quality. To determine the extent of pesticide contamination, the California Department of Pesticide Regulation initiated a multi-area urban monitoring program in 2008. Water and sediment samples were collected at sites unaffected by agricultural inputs in three areas: Sacramento (SAC), San Francisco Bay (SFB), and Orange County (OC). Samples were analyzed for up to 64 pesticides or degradates. Multiple detections were common; 50 % of the water samples contained five or more pesticides. Statewide, the most frequently detected insecticides in water were bifenthrin, imidacloprid, fipronil, fipronil sulfone, fipronil desulfinyl, carbaryl, and malathion. Bifenthrin was the most common contaminant in sediment samples. Key differences by area: OC had more pesticides detected than SAC or SFB with higher concentrations of fipronil, whereas SAC had higher concentrations of bifenthrin. The most frequently detected herbicides were 2,4-D, triclopyr, dicamba, diuron, and pendimethalin. Key differences by area: OC and SFB had higher concentrations of triclopyr, whereas SAC had higher concentrations of 2,4-D and dicamba. Detection frequency, number of pesticides per sample, and pesticide concentration increased during rainstorm events. In water samples, all of the bifenthrin, malathion, fipronil, permethrin, and λ-cyhalothrin detections, and most of the fipronil sulfone and cyfluthrin detections were above their lowest US EPA aquatic benchmark. Diuron was the only herbicide that was detected above its lowest benchmark. Based on the number of pesticides and exceedances of aquatic benchmarks or the high number of sediment toxicity units, pesticides are abundant in California surface waters. PMID:22899460

  1. Tidally oscillating bisulfide fluxes and fluid flow rates observed with in situ chemical sensors at a warm spring in Monterey Bay, California

    Science.gov (United States)

    Plant, Josh N.; Johnson, Kenneth S.; Fitzwater, Steve E.; Sakamoto, Carole M.; Coletti, Luke J.; Jannasch, Hans W.

    2010-12-01

    An In Situ Ultraviolet Spectrophotometer (ISUS) was coupled to a benthic chamber to characterize the bisulfide flux emanating from a warm spring at the Extrovert Cliff locality within Monterey Bay, California. The chamber was periodically flushed with bottom seawater to reset chemical concentrations, which enabled deployments over multiple days. Data from several deployments, each lasting at least 10 days, were used to calculate flow rates, fluid concentrations, and fluxes over time. The bisulfide concentration of the fluid entering the chamber varied from 75 to 4500 μmol l -1. Positive temperature anomalies up to 3.5° were associated with these elevated concentrations. Linear flow rates ranged from 2 to >17 m day -1, while the bisulfide fluxes varied from 0.2 to 80 mol m -2 day -1. The bisulfide originated at depth and was not produced in the surface sediments via an anaerobic oxidation of methane coupled to sulfate reduction. Tides modulated the flow as well as the composition of the fluid entering the chamber. It appeared that a deep sourced fluid, which supplied the bisulfide, was mixed with a second, ambient seawater-like fluid before entering the flux chamber. At low tides, flow rates were at their highest and the contribution of the deep sourced fluid to the fluid entering the chamber was at a maximum.

  2. Energy-water nexus analysis of enhanced water supply scenarios: a regional comparison of Tampa Bay, Florida, and San Diego, California.

    Science.gov (United States)

    Mo, Weiwei; Wang, Ranran; Zimmerman, Julie B

    2014-05-20

    Increased water demand and scarce freshwater resources have forced communities to seek nontraditional water sources. These challenges are exacerbated in coastal communities, where population growth rates and densities in the United States are the highest. To understand the current management dilemma between constrained surface and groundwater sources and potential new water sources, Tampa Bay, Florida (TB), and San Diego, California (SD), were studied through 2030 accounting for changes in population, water demand, and electricity grid mix. These locations were chosen on the basis of their similar populations, land areas, economies, and water consumption characters as well as their coastal locations and rising contradictions between water demand and supply. Three scenarios were evaluated for each study area: (1) maximization of traditional supplies; (2) maximization of seawater desalination; and (3) maximization of nonpotable water reclamation. Three types of impacts were assessed: embodied energy, greenhouse gas (GHG) emission, and energy cost. SD was found to have higher embodied energy and energy cost but lower GHG emission than TB in most of its water infrastructure systems because of the differences between the electricity grid mixes and water resources of the two regions. Maximizing water reclamation was found to be better than increasing either traditional supplies or seawater desalination in both regions in terms of the three impact categories. The results further imply the importance of assessing the energy-water nexus when pursuing demand-side control targets or goals as well to ensure that the potentially most economical options are considered. PMID:24730467

  3. A re-evaluation of the size of the white shark (Carcharodon carcharias population off California, USA.

    Directory of Open Access Journals (Sweden)

    George H Burgess

    Full Text Available White sharks are highly migratory and segregate by sex, age and size. Unlike marine mammals, they neither surface to breathe nor frequent haul-out sites, hindering generation of abundance data required to estimate population size. A recent tag-recapture study used photographic identifications of white sharks at two aggregation sites to estimate abundance in "central California" at 219 mature and sub-adult individuals. They concluded this represented approximately one-half of the total abundance of mature and sub-adult sharks in the entire eastern North Pacific Ocean (ENP. This low estimate generated great concern within the conservation community, prompting petitions for governmental endangered species designations. We critically examine that study and find violations of model assumptions that, when considered in total, lead to population underestimates. We also use a Bayesian mixture model to demonstrate that the inclusion of transient sharks, characteristic of white shark aggregation sites, would substantially increase abundance estimates for the adults and sub-adults in the surveyed sub-population. Using a dataset obtained from the same sampling locations and widely accepted demographic methodology, our analysis indicates a minimum all-life stages population size of >2000 individuals in the California subpopulation is required to account for the number and size range of individual sharks observed at the two sampled sites. Even accounting for methodological and conceptual biases, an extrapolation of these data to estimate the white shark population size throughout the ENP is inappropriate. The true ENP white shark population size is likely several-fold greater as both our study and the original published estimate exclude non-aggregating sharks and those that independently aggregate at other important ENP sites. Accurately estimating the central California and ENP white shark population size requires methodologies that account for biases

  4. A re-evaluation of the size of the white shark (Carcharodon carcharias) population off California, USA.

    Science.gov (United States)

    Burgess, George H; Bruce, Barry D; Cailliet, Gregor M; Goldman, Kenneth J; Grubbs, R Dean; Lowe, Christopher G; MacNeil, M Aaron; Mollet, Henry F; Weng, Kevin C; O'Sullivan, John B

    2014-01-01

    White sharks are highly migratory and segregate by sex, age and size. Unlike marine mammals, they neither surface to breathe nor frequent haul-out sites, hindering generation of abundance data required to estimate population size. A recent tag-recapture study used photographic identifications of white sharks at two aggregation sites to estimate abundance in "central California" at 219 mature and sub-adult individuals. They concluded this represented approximately one-half of the total abundance of mature and sub-adult sharks in the entire eastern North Pacific Ocean (ENP). This low estimate generated great concern within the conservation community, prompting petitions for governmental endangered species designations. We critically examine that study and find violations of model assumptions that, when considered in total, lead to population underestimates. We also use a Bayesian mixture model to demonstrate that the inclusion of transient sharks, characteristic of white shark aggregation sites, would substantially increase abundance estimates for the adults and sub-adults in the surveyed sub-population. Using a dataset obtained from the same sampling locations and widely accepted demographic methodology, our analysis indicates a minimum all-life stages population size of >2000 individuals in the California subpopulation is required to account for the number and size range of individual sharks observed at the two sampled sites. Even accounting for methodological and conceptual biases, an extrapolation of these data to estimate the white shark population size throughout the ENP is inappropriate. The true ENP white shark population size is likely several-fold greater as both our study and the original published estimate exclude non-aggregating sharks and those that independently aggregate at other important ENP sites. Accurately estimating the central California and ENP white shark population size requires methodologies that account for biases introduced by sampling a

  5. Demography, movement patterns, and mating system of leopard sharks (Triakis semifasciata) aggregating along the open coast of southern California, USA

    OpenAIRE

    Nosal, Andrew Phillip

    2013-01-01

    This dissertation describes the aggregation behavior of the leopard shark (Triakis semifasciata) along the open coasts of La Jolla (LJ; primary focus) and Del Mar (DM), California, which are 12 km apart. The male-to-female ratio was 0.0299 in LJ (n = 140) and 1.0450 in DM (n = 45). Twenty females and 13 males were surgically fitted with coded acoustic transmitters and passively tracked for 1,148 days by an array of seven underwater acoustic receivers spanning 120 km of coastline from San Clem...

  6. Nitrification in the euphotic zone as evidenced by nitrate dual isotopic composition: Observations from Monterey Bay, California

    Science.gov (United States)

    Wankel, Scott D.; Kendall, C.; Pennington, J.T.; Chavez, F.P.; Paytan, A.

    2007-01-01

    Coupled measurements of nitrate (NO3-), nitrogen (N), and oxygen (O) isotopic composition (??15NNO3 and ??18ONO3) were made in surface waters of Monterey Bay to investigate multiple N cycling processes occurring within surface waters. Profiles collected throughout the year at three sites exhibit a wide range of values, suggesting simultaneous and variable influence of both phytoplankton NO3- assimilation and nitrification within the euphotic zone. Specifically, increases ??18ONO3 were consistently greater than those in ??15NN03. A coupled isotope steady state box model was used to estimate the amount of NO3- supplied by nitrification in surface waters relative to that supplied from deeper water. The model highlights the importance of the branching reaction during ammonium (NH4+) consumption, in which NH4+ either serves as a substrate for regenerated production or for nitrification. Our observations indicate that a previously unrecognized proportion of nitrate-based productivity, on average 15 to 27%, is supported by nitrification in surface waters and should not be considered new production. This work also highlights the need for a better understanding of isotope effects of NH4+ oxidation, NH4+ assimilation, and NO4+ assimilation in marine environments.

  7. Heavy metal accumulation in Lacistorhynchus dollfusi (Trypanorhyncha: Lacistorhynchidae) infecting Citharichthys sordidus (Pleuronectiformes: Bothidae) from Santa Monica Bay, Southern California.

    Science.gov (United States)

    Courtney-Hogue, C

    2016-05-01

    The accumulation of heavy metals in macroparasites of fish has been widely studied in freshwater environments. Less is known about metal uptake in cestodes parasitizing marine fish. Lacistorhynchus dollfusi is a common larval cestode parasite of Pacific sanddab (Citharichthys sordidus), a flatfish species inhabiting Santa Monica Bay. The ability of this cestode to concentrate metals in its tissues was compared with metal levels in its sanddab host. Fish and cestode tissue were analysed for 14 elements using Inductively Coupled Plasma Mass Spectrometry. The elements analysed were silver (Ag), arsenic (As), cadmium (Cd), chromium (Cr), copper (Cu), iron (Fe), mercury (Hg), potassium (K), lead (Pb), rubidium (Rb), selenium (Se), strontium (Sr), titanium (Ti) and zinc (Zn). Three of the 14 metals (Cu, Hg and Zn) were significantly greater in concentration in L. dollfusi compared with their levels in the liver, intestine and muscle of their fish host. They ranked in concentration from highest to lowest as follows: Zn > Cu > Hg. The ability of the cestode L. dollfusi to uptake metals at higher concentrations than its host warrants its consideration as a candidate for a heavy metal accumulation indicator of pollution exposure in Pacific sanddab. PMID:27000633

  8. A New GLORIA Target Region in the Sierra Nevada, California, USA; Alpine Plant Monitoring For Global Climate Change

    Science.gov (United States)

    Dennis, A.; Millar, C. I.; Murrell, K. E.

    2004-12-01

    The Global Observation Research Initiative in Alpine Environments (GLORIA) is an international research project with the goal to assess climate change impacts on vegetation in alpine environments worldwide. Standardized protocols direct selection of each node in the network, called a target region, which consists of a set of four geographically proximal mountain summits at elevations extending from treeline to the nival zone. For each summit, GLORIA specifies a rigorous mapping and sampling design for data collection, with re-measurement intervals of five years. Whereas target regions have been installed in six continents, prior to 2004 none was completed in North America. In cooperation with the Consortium for Integrated Climate Research in Western Mountains (CIRMOUNT), three target regions were completed by September 2004, one in the Sierra Nevada, California, one in the White Mountains, California, and one in Glacier National Park, Montana. The SIERRA NEVADA (GLORIA code: SND) target region lies along the Sierra Nevada crest in the Yosemite National Park/Mono Lake region. The four summits well represent the GLORIA design standards, being little visited by climbers, outside domestic grazing allotments, relatively rounded in shape, situated within one climate region, related substrate types (metamorphic), and extending from treeline to the highest elevation zones in the area. The four summits include the subordinate peak of Mt Dunderberg (3744m), two lesser peaks of Mt Dunderberg (3570m and 3322m) and a summit along the Yosemite National Park boundary region south of Mt Conness (3425m). Preliminary data indicate that numbers of vascular plant species, from lowest to highest summit, were 40, 36, 12, 22 (total for SN, 67). Only 1 species (Elymus elymoides ssp. californicus) occurred on all four summits; 8 species occurred on three summits; no exotic species was detected. The most distant summit, also most distinct in substrate, had the largest number of unique

  9. Eddy Covariance Measured Methane and Carbon Dioxide Fluxes for a Restored Wetland, Sacramento - San Joaquin Delta, California, USA

    Science.gov (United States)

    Anderson, F.; Detto, M.; Verfaillie, J. G.; Hatala, J.; Baldocchi, D. D.; Bergamaschi, B. A.; Fujii, R.

    2010-12-01

    There is an increase in investment to protect and restore natural wetlands due to environmental benefits such as soil carbon storage, atmospheric carbon sequestration, and in the case of the Sacramento-San Joaquin Delta (SSJ-Delta), subsidence reversal. Although these ecosystems can actively increase stored carbon or limit oxidation of existing soil organic carbon (e.g. peat), anaerobic conditions created by permanent and semi-permanent flooding can result in the release of methane (CH4), a more potent greenhouse gas. In the summer of 2010, continuous eddy covariance measurements of CH4 and carbon dioxide (CO2) were collected from a restored wetland marsh on Twitchell Island in the SSJ-Delta. The eddy covariance instrumentation includes a CSAT3 sonic anemometer(Campbell Scientific, Logan, UT USA) , an open-path CO2/H2O infrared gas analyzer (LI-7500, LI-COR Biogeosciences, Lincoln NE USA) and closed-path tunable diode laser fast methane sensor (FMA or FGGA, Los Gatos Research). From June 22-30, an open-path methane analyzer (LI-7700, LI-COR Biogeosciences) was installed for 2-3 weeks to compare with the closed-path method. Initial results over the growing season, show the wetland’s potential to be a sink for CO2, as maximum daily values are around -10 µmol m-2 s-1. However, CH4 emissions may offset this potential as average CH4 emissions from the open and closed path comparison study were close to 200 nmol m-2 s-1, with peak rates as high as 400 nmol m-2 s-1. Here we present results showing diurnal and seasonal trends of CH4 and CO2 fluxes, which are dependent upon air, leaf, and water temperatures, differences in humidity, and plant stomatal controls, all driven by changes in daily and seasonal variations in solar radiation.

  10. Risk factors associated with clinic visits during the 1999 forest fires near the Hoopa Valley Indian Reservation, California, USA.

    Science.gov (United States)

    Lee, Tze-San; Falter, Kenneth; Meyer, Pamela; Mott, Joshua; Gwynn, Charon

    2009-10-01

    Forest fires burned near the Hoopa Valley Indian Reservation in northern California from late August until early November in 1999. The fires generated particulate matter reaching hazardous levels. We assessed the relationship between patients seeking care for six health conditions and PM(10) exposure levels during the 1999 fires and during the corresponding period in 1998 when there were no fires. Multivariate logistic regression analysis indicated that daily PM(10) levels in 1999 were significant predictors for patients seeking care for asthma, coronary artery disease and headache after controlling for potential risk factors. Stratified multivariate logistic regression models indicated that daily PM(10) levels in 1999 were significant predictors for patients seeking care for circulatory illness among residents of nearby communities and new patients, and for respiratory illness among residents of Hoopa and those of nearby communities. PMID:19629821

  11. International Society for Aerosols in Medicine, 17th congress, 10-14 May 2009, Monterey, California, USA.

    Science.gov (United States)

    Newman, Steve

    2009-08-01

    The 17th biennial congress of the International Society for Aerosols in Medicine (ISAM) was held in Monterey, California, between 10 and 14 May 2009. The congress was attended by approximately 300 delegates from 18 countries. Podium presentations were focused on advances in pulmonary drug delivery, but clearance of materials from the lungs by a variety of processes and the potential harmful effects of inhaled particles were also covered. There were > 100 proffered posters, and a commercial exhibition in which 20 companies displayed their products. There were excellent networking opportunities, and the inauguration of more formal networking groups will allow dialogue to continue. Abstracts of podium and poster presentations were provided in the Journal of Aerosol Medicine and Pulmonary Drug Delivery, and it is likely that some of the podium presentations will appear as full papers in that journal in due course. The next conference in this series takes place in Rotterdam, The Netherlands, in June 2011. PMID:19637975

  12. ECOLOGIC DRIVERS AND POPULATION IMPACTS OF AVIAN TRICHOMONOSIS MORTALITY EVENTS IN BAND-TAILED PIGEONS (PATAGIOENAS FASCIATA) IN CALIFORNIA, USA.

    Science.gov (United States)

    Rogers, Krysta H; Girard, Yvette A; Koenig, Walter D; Johnson, Christine K

    2016-07-01

    :   Avian trichomonosis, a disease typically caused by the protozoan parasite Trichomonas gallinae , is a well recognized cause of death in many avian species. In California, US, trichomonosis has caused periodic epidemics in Pacific Coast Band-tailed Pigeons ( Patagioenas fasciata monilis). We summarize reported mortality events and investigate ecologic drivers and population impacts associated with epidemic mortality due to trichomonosis in Band-tailed Pigeons. Between 1945 and 2014, 59 mortality events involving Band-tailed Pigeons were reported in California with the number of reported events increasing over time. Estimated mortality for these events was variable, ranging between 10 and 10,000 pigeons. Events were most-frequently reported in Monterey (19%; 11/59) and San Luis Obispo (8%; 5/59) counties. Events often started in January (32%; 9/28) and February (50%; 14/28) and lasted 5-68 d. Impacts of mortality events on pigeon populations were indicated by Breeding Bird Survey and Christmas Bird Count abundance indices, which showed a decline in outbreak years compared to nonoutbreak years. Environmental conditions most associated with outbreak years included higher average temperatures between January and March, the period most associated with mortality events, and lower average precipitation in December just prior to mortality events. In Monterey County, events tended to occur in winters following higher acorn production of coast live oaks ( Quercus agrifolia ) in the fall. Weather and food abundance could be related to increased transmission or enhanced viability of Trichomonas spp. Although estimated mortality due to avian trichomonosis was highly variable across years, cumulative losses were substantial and likely to have a negative impact on population size. PMID:27187033

  13. Data from Theodolite Measurements of Creep Rates on San Francisco Bay Region Faults, California: 1979-2007

    Science.gov (United States)

    McFarland, Forrest S.; Lienkaemper, James J.; Caskey, S. John; Grove, Karen

    2007-01-01

    Introduction Our purpose is to update with six additional years of data, our creep data archive on San Francisco Bay region active faults for use by the scientific research community. Earlier data (1979-2001) were reported in Galehouse (2002) and were analyzed and described in detail in a summary report (Galehouse and Lienkaemper, 2003). A complete analysis of our earlier results obtained on the Hayward fault was presented in Lienkaemper, Galehouse and Simpson (2001). Jon Galehouse of San Francisco State University (SFSU) and many student research assistants measured creep (aseismic slip) rates on these faults from 1979 until his retirement from the project in 2001. The creep measurement project, which was initiated by Galehouse, has continued through the Geosciences Department at SFSU from 2001-2006 under the direction of Co-P.I.'s Karen Grove and John Caskey (Grove and Caskey, 2005), and by Caskey since 2006. Forrest McFarland has managed most of the technical and logistical project operations as well as data processing and compilation since 2001. We plan to publish detailed analyses of these updated creep data in future publications. We maintain a project web site (http://funnel.sfsu.edu/creep/) that includes the following information: project description, project personnel, creep characteristics and measurement, map of creep measurement sites, creep measurement site information, and data plots for each measurement site. Our most current, annually updated results are therefore accessible to the scientific community and to the general public. Information about the project can currently be requested by the public by an email link (fltcreep@sfsu.edu) found on our project website.

  14. BACTERIOPLANKTON DYNAMICS IN NORTHERN SAN FRANCISCO BAY: ROLE OF PARTICLE ASSOCIATION AND SEASONAL FRESHWATER FLOW

    Science.gov (United States)

    Bacterioplankton abundance and metabolic characteristics were observed in northern San Francisco Bay, California, during spring and summer 1996 at three sites: Central Bay, Suisun Bay, and the Sacramento River. These sites spanned a salinity gradient from marine to freshwater, an...

  15. Distribution of chlorinated hydrocarbons in overlying water, sediment, polychaete, and hornyhead turbot (Pleuronichthys verticalis) in the coastal ocean, Southern California, USA.

    Science.gov (United States)

    Zeng, Eddy Y; Tran, Kim

    2002-08-01

    1,1,1-Trichloro-2,2-bis(p-chlorophenyl)ethane (DDT) and its primary metabolites (DDTs) and polychlorinated biphenyls (PCBs) are a major source of concern in the Southern California Bight (SCB), USA. The fate of DDTs and PCBs is a key element in assessing the effects imposed by these potential carcinogens on the marine ecosystem. We found that DDTs and PCBs remained widely distributed in the overlying water, sediment, polychaetes, and liver and muscle tissues of the hornyhead turbot (Pleuronichthys verticalis) collected from three nearshore locations of the SCB with different levels of contamination. Student's t tests indicated that the measured partition coefficients between the nonaqueous phases (sediment, polychaete, and fish) and overlying water at a heavily contaminated location were significantly greater than those predicted by the equilibrium partitioning theory (EPT). Measured partition coefficients between the nonaqueous phases and overlying water for a few DDT components at two other stations (moderate and low contamination) were also generally greater than the EPT predictions. On the other hand, DDTs and PCBs in polychaetes and fish tissues may be taken up from sediments via equilibrium partitioning or from food sources. These findings are suggestive of the possibility that contaminated sediments may have become an important source of contamination. PMID:12152759

  16. How can investment in the landscape or the interface reduce the risk of house loss from wildfires? A comparative study between Sydney, Australia and California, USA

    Science.gov (United States)

    Penman, Trent; Bradstock, Ross; Collins, Luke; Fotheringham, Cj; Keeley, Jon; Labiosa, Bill; Price, Owen; Syphard, Alex

    2013-04-01

    Wildfire can result in significant losses to people and property. Management agencies undertake a range of actions in the landscape and at the interface to reduce this risk. Data relating to the success of individual treatments varies, with some approaches well understood and others less so. Research has rarely attempted to consider the interactive effects of treatments in order to determine optimal management strategies that reduce the risk of loss. Bayesian Networks provide a statistical framework for undertaking such an analysis. Here we apply Bayesian Networks to examine the trade-offs in investment in preventative actions (e.g., fuel treatment, community education, development controls) and suppressive actions (e.g., initial attack, landscape suppression, property protection) in two fire prone regions -Sydney, Australia and California, USA. Investment in management actions at the interface resulted in the greatest reduction in the risk of house loss for both of the study regions. Landscape treatments had a limited ability to change the risk of house loss.

  17. High abundances of potentially active ammonia-oxidizing bacteria and archaea in oligotrophic, high-altitude lakes of the Sierra Nevada, California, USA.

    Directory of Open Access Journals (Sweden)

    Curtis J Hayden

    Full Text Available Nitrification plays a central role in the nitrogen cycle by determining the oxidation state of nitrogen and its subsequent bioavailability and cycling. However, relatively little is known about the underlying ecology of the microbial communities that carry out nitrification in freshwater ecosystems--and particularly within high-altitude oligotrophic lakes, where nitrogen is frequently a limiting nutrient. We quantified ammonia-oxidizing archaea (AOA and bacteria (AOB in 9 high-altitude lakes (2289-3160 m in the Sierra Nevada, California, USA, in relation to spatial and biogeochemical data. Based on their ammonia monooxygenase (amoA genes, AOB and AOA were frequently detected. AOB were present in 88% of samples and were more abundant than AOA in all samples. Both groups showed >100 fold variation in abundance between different lakes, and were also variable through time within individual lakes. Nutrient concentrations (ammonium, nitrite, nitrate, and phosphate were generally low but also varied across and within lakes, suggestive of active internal nutrient cycling; AOB abundance was significantly correlated with phosphate (r(2 = 0.32, p<0.1, whereas AOA abundance was inversely correlated with lake elevation (r(2 = 0.43, p<0.05. We also measured low rates of ammonia oxidation--indicating that AOB, AOA, or both, may be biogeochemically active in these oligotrophic ecosystems. Our data indicate that dynamic populations of AOB and AOA are found in oligotrophic, high-altitude, freshwater lakes.

  18. Assessing aquifer contamination vulnerability using tritium-helium ages in public drinking water wells in California, USA

    International Nuclear Information System (INIS)

    We have sampled over 800 public drinking water wells as part of a study to assess relative contamination susceptibility of the major groundwater basins in California. This project is sponsored by the California State Water Resources Control Board, and is carried out in collaboration with the U.S. Geological Survey. The parameters used to rank wells according to vulnerability are groundwater age dates (using the tritium-3helium method), stable isotopes of the water molecule (for water source determination), and occurrence of low level Volatile Organic Compounds (VOCs). The project, carried out in collaboration with the US Geological Survey, uses these observational data in a probabilistic approach to assess the vulnerability of public water supply wells to contamination by anthropogenic compounds. Sources of contamination to groundwater occur near the earth's surface, and have been present mostly since World War II. Therefore, wells that receive water that has recharged in the recent past (young groundwater ages) are more likely to intercept contaminants transported by advection. Because of the large number of samples collected, the major basins used for drinking water supply can be compared and contrasted in terms of relative vulnerability. A large volume of both imported and locally captured water is artificially recharged in these urbanized, intensively managed basins. Imported recharge water from higher elevations is identified by lighter δ18O signatures, while the downgradient flow pattern of recent recharge is outlined by increasing groundwater age. The presence of a continuous confining unit can be the key feature for protecting deep aquifers in areas with ubiquitous surface contamination. For example, an effective confining unit in the Santa Clara Valley basin (Silicon Valley) prevents widespread vertical transport of contaminants down to drinking water wells. In the Los Angeles County and Orange County basins of southern California, groundwater age and the

  19. Epidemiology and potential land-sea transfer of enteric bacteria from terrestrial to marine species in the Monterey Bay Region of California.

    Science.gov (United States)

    Oates, Stori C; Miller, Melissa A; Byrne, Barbara A; Chouicha, Nadira; Hardin, Dane; Jessup, David; Dominik, Clare; Roug, Annette; Schriewer, Alexander; Jang, Spencer S; Miller, Woutrina A

    2012-07-01

    Marine mammals are at risk for infection by fecal-associated zoonotic pathogens when they swim and feed in polluted nearshore marine waters. Because of their tendency to consume 25-30% of their body weight per day in coastal filter-feeding invertebrates, southern sea otters (Enhydra lutris nereis) can act as sentinels of marine ecosystem health in California. Feces from domestic and wildlife species were tested to determine prevalence, potential virulence, and diversity of selected opportunistic enteric bacterial pathogens in the Monterey Bay region. We hypothesized that if sea otters are sentinels of coastal health, and fecal pollution flows from land to sea, then sea otters and terrestrial animals might share the same enteric bacterial species and strains. Twenty-eight percent of fecal samples tested during 2007-2010 were positive for one or more potential pathogens. Campylobacter spp. were isolated most frequently, with an overall prevalence of 11%, followed by Vibrio cholerae (9%), Salmonella spp. (6%), V. parahaemolyticus (5%), and V. alginolyticus (3%). Sea otters were found positive for all target bacteria, exhibiting similar prevalences for Campylobacter and Salmonella spp. but greater prevalences for Vibrio spp. when compared to terrestrial animals. Fifteen Salmonella serotypes were detected, 11 of which were isolated from opossums. This is the first report of sea otter infection by S. enterica Heidelberg, a serotype also associated with human clinical disease. Similar strains of S. enterica Typhimurium were identified in otters, opossums, and gulls, suggesting the possibility of land-sea transfer of enteric bacterial pathogens from terrestrial sources to sea otters. PMID:22740531

  20. Peat Formation Processes Through the Millennia in Tidal Marshes of the Sacramento-San Joaquin Delta, California, USA

    Science.gov (United States)

    Drexler, J.Z.

    2011-01-01

    The purpose of this study was to determine peat formation processes throughout the millennia in four tidal marshes in the Sacramento-San Joaquin Delta. Peat cores collected at each site were analyzed for bulk density, loss on ignition, and percent organic carbon. Core data and spline fit age-depth models were used to estimate inorganic sedimentation, organic accumulation, and carbon sequestration rates in the marshes. Bulk density and percent organic matter content of peat fluctuated through time at all sites, suggesting that peat formation processes are dynamic and responsive to watershed conditions. The balance between inorganic sedimentation and organic accumulation at the sites also varied through time, indicating that marshes may rely more strongly on either inorganic or organic matter for peat formation at particular times in their existence. Mean carbon sequestration rates found in this study (0. 38-0. 79 Mg C ha-1 year-1) were similar to other long-term estimates for temperate peatlands. ?? 2011 Coastal and Estuarine Research Federation (outside the USA).

  1. Projected evolution of California's San Francisco Bay-Delta-river system in a century of climate change.

    Directory of Open Access Journals (Sweden)

    James E Cloern

    Full Text Available BACKGROUND: Accumulating evidence shows that the planet is warming as a response to human emissions of greenhouse gases. Strategies of adaptation to climate change will require quantitative projections of how altered regional patterns of temperature, precipitation and sea level could cascade to provoke local impacts such as modified water supplies, increasing risks of coastal flooding, and growing challenges to sustainability of native species. METHODOLOGY/PRINCIPAL FINDINGS: We linked a series of models to investigate responses of California's San Francisco Estuary-Watershed (SFEW system to two contrasting scenarios of climate change. Model outputs for scenarios of fast and moderate warming are presented as 2010-2099 projections of nine indicators of changing climate, hydrology and habitat quality. Trends of these indicators measure rates of: increasing air and water temperatures, salinity and sea level; decreasing precipitation, runoff, snowmelt contribution to runoff, and suspended sediment concentrations; and increasing frequency of extreme environmental conditions such as water temperatures and sea level beyond the ranges of historical observations. CONCLUSIONS/SIGNIFICANCE: Most of these environmental indicators change substantially over the 21(st century, and many would present challenges to natural and managed systems. Adaptations to these changes will require flexible planning to cope with growing risks to humans and the challenges of meeting demands for fresh water and sustaining native biota. Programs of ecosystem rehabilitation and biodiversity conservation in coastal landscapes will be most likely to meet their objectives if they are designed from considerations that include: (1 an integrated perspective that river-estuary systems are influenced by effects of climate change operating on both watersheds and oceans; (2 varying sensitivity among environmental indicators to the uncertainty of future climates; (3 inevitability of

  2. The legacy of wetland drainage on the remaining peat in the Sacramento-San Joaquin Delta, California, USA

    Science.gov (United States)

    Drexler, Judith Z.; Christian S. de Fontaine; Steven J. Deverel

    2009-01-01

    Throughout the world, many extensive wetlands, such as the Sacramento-San Joaquin Delta of California (hereafter, the Delta), have been drained for agriculture, resulting in land-surface subsidence of peat soils. The purpose of this project was to study the in situ effects of wetland drainage on the remaining peat in the Delta. Peat cores were retrieved from four drained, farmed islands and four relatively undisturbed, marsh islands. Core samples were analyzed for bulk density and percent organic carbon. Macrofossils in the peat were dated using radiocarbon age determination. The peat from the farmed islands is highly distinct from marsh island peat. Bulk density of peat from the farmed islands is generally greater than that of the marsh islands at a given organic carbon content. On the farmed islands, increased bulk density, which is an indication of compaction, decreases with depth within the unoxidized peat zone, whereas, on the marsh islands, bulk density is generally constant with depth except near the surface. Approximately 55–80% of the original peat layer on the farmed islands has been lost due to landsurface subsidence. For the center regions of the farmed islands, this translates into an estimated loss of between 2900-5700 metric tons of organic carbon/hectare. Most of the intact peat just below the currently farmed soil layer is over 4000 years old. Peat loss will continue as long as the artificial water table on the farmed islands is held below the land surface.

  3. The legacy of wetland drainage on the remaining peat in the Sacramento San Joaquin Delta, California, USA

    Science.gov (United States)

    Drexler, J.Z.; De Fontaine, C. S.; Deverel, S.J.

    2009-01-01

    Throughout the world, many extensive wetlands, such as the Sacramento-San Joaquin Delta of California (hereafter, the Delta), have been drained for agriculture, resulting in land-surface subsidence of peat soils. The purpose of this project was to study the in situ effects of wetland drainage on the remaining peat in the Delta. Peat cores were retrieved from four drained, farmed islands and four relatively undisturbed, marsh islands. Core samples were analyzed for bulk density and percent organic carbon. Macrofossils in the peat were dated using radiocarbon age determination. The peat from the farmed islands is highly distinct from marsh island peat. Bulk density of peat from the farmed islands is generally greater than that of the marsh islands at a given organic carbon content. On the farmed islands, increased bulk density, which is an indication of compaction, decreases with depth within the unoxidized peat zone, whereas, on the marsh islands, bulk density is generally constant with depth except near the surface. Approximately 5580 of the original peat layer on the farmed islands has been lost due to land-surface subsidence. For the center regions of the farmed islands, this translates into an estimated loss of between 29005700 metric tons of organic carbon/hectare. Most of the intact peat just below the currently farmed soil layer is over 4000 years old. Peat loss will continue as long as the artificial water table on the farmed islands is held below the land surface. ?? 2009 The Society of Wetland Scientists.

  4. Description of a new species of Paracrobeles Heyns, 1968 (Nematoda, Rhabditida, Cephalobidae from Kelso Dunes, Mojave National Preserve, California, USA

    Directory of Open Access Journals (Sweden)

    Sven Boström

    2015-03-01

    Full Text Available A new species of Paracrobeles, P. kelsodunensis sp. nov. is described from the Kelso Dunes area, Mojave National Preserve, southern California. Paracrobeles kelsodunensis sp. nov. is particularly characterised by a body length of 469–626 μm in females and 463–569 μm in males; lateral field with four incisures, extending almost to tail terminus; three pairs of asymmetrical lips, separated by U-shaped primary axils with two long guarding processes, each lip usually with four tines along its margin; three long labial probolae, deeply bifurcated, with slender prongs without tines; metastegostom with a strong anteriorly directed dorsal tooth; pharyngeal corpus anteriorly spindle-shaped, posteriorly elongate bulbous with dilated lumen; spermatheca 24–87 μm long; postvulval uterine sac 60–133 μm long; vulva in a sunken area; spicules 33–38 μm long; and male tail with a 5–8 μm long mucro. The generic diagnosis is emended on the basis of recently described species and a key to the species of Paracrobeles is provided.

  5. Controls on mineralisation in the Sierra Foothills gold province, central California, USA: A GIS-based reconnaissance prospectivity analysis

    Science.gov (United States)

    Bierlein, F.P.; Northover, H.J.; Groves, D.I.; Goldfarb, R.J.; Marsh, E.E.

    2008-01-01

    The assessment of spatial relationships between the location, abundance and size of orogenic-gold deposits in the highly endowed Sierra Foothills gold province in California, via the combination of field studies and a GIS-based analysis, illustrates the power of such an approach to the characterisation of important parameters of mineral systems, and the prediction of districts likely to host economic mineralisation. Regional- to deposit-scale reconnaissance mapping suggests that deposition of gold-bearing quartz veins occurred in second- and third-order, east-over-west thrusts during regional east - west compression and right-lateral transpression. At the district-scale, significant zones of mineralisation correspond with such transpressional reactivation zones and dilational jogs that developed during the Late Jurassic - Early Cretaceous along the misaligned segments of first-order faults throughout the Sierra Nevada Foothills Metamorphic Belt. Field-based observations and interpretation of GIS data (including solid geology, structural elements, deposit locations, magnetics, gravity) also highlight the importance of structural permeability contrasts, rheological gradients, and variations in fault orientation for localising mineralisation. Although this approach confirms empirical findings and produces promising results at the province scale, enhanced geological, structural, geophysical and geochronological data density is required to generate regionally consistent, high-quality input layers that improve predictive targeting at the goldfield to deposit-scale.

  6. Oribatid Mite Community Decline Two Years after Low-Intensity Burning in the Southern Cascade Range of California, USA

    Directory of Open Access Journals (Sweden)

    Nancy E. Gillette

    2012-10-01

    Full Text Available To assess effects of low-intensity fire, we combined two silvicultural prescriptions with prescribed fire in the California Cascade Range. In the first treatment, two 100-ha stands were thinned to reduce density while retaining old-growth structural characteristics, yielding residual stands with high structural diversity (HSD. Two other 100-ha plots were thinned to minimize old growth structure, producing even-aged stands of low structural diversity (LSD, and one 50-ha split-plot from each treatment was burned. In addition, two 50 ha old-growth Research Natural Areas (RNA were selected as untreated reference plots, one of which was also burned. Fire treatments profoundly altered mite assemblages in the short term, and forest structure modification likely exacerbated that response. Sampling conducted two years following treatment confirmed a continuing decline in oribatid mite abundance. Oribatid species richness and assemblage heterogeneity also declined, and community dominance patterns were disrupted. Oribatid responses to fire were either more intense or began earlier in the LSD treatments, suggesting that removal of old-growth structure exacerbated mite responses to fire. Prostigmatids recovered quickly, but their populations nonetheless diminished significantly in burned split-plots. Mite assemblage responses to prescribed fire were continuing nearly two years later, with no clear evidence of recovery.

  7. Can We Mitigate Climate Extremes using Managed Aquifer Recharge: Case Studies California Central Valley and South-Central Arizona, USA

    Science.gov (United States)

    Scanlon, B. R.; Reedy, R. C.; Faunt, C. C.; Pool, D. R.; Uhlman, K.

    2015-12-01

    Frequent long-term droughts interspersed with intense floods in the southwestern U.S. underscore the need to store more water to manage these climate extremes. Here we show how managed aquifer recharge can enhance drought resilience in the southwestern U.S. with ~ 70% of California under extreme drought and 75% of Arizona under moderate drought. Data on water sources, transportation, and users were compiled for managed aquifer recharge systems in the Central Valley and south-central Arizona. Groundwater depletion of 115 to 145 km3 in the 1900s created large subsurface reservoirs in thick alluvial basins in these regions. Large canals and aqueducts up to several 100 km long allow water to be imported from reservoirs, mostly in more humid regions. Imported water is either used instead of groundwater or is applied in surface spreading basins primarily during wet periods (≤1.3 km3/yr Central Valley, ≤0.7 km3/yr Arizona) and is extracted during droughts. The dominant water users include irrigators and municipalities both within and outside the managed aquifer recharge systems. Groundwater modeling indicates that recharge basins significantly increase groundwater storage in the Central Valley. Managed aquifer recharge systems significantly enhance drought resilience and increase sustainability of water resources in semiarid regions, complementing surface water reservoirs and conjunctive surface water/groundwater use by providing longer term storage.

  8. Novel poxvirus infection in northern and southern sea otters (Enhydra lutris kenyoni and Enhydra lutris neiris), Alaska and California, USA.

    Science.gov (United States)

    Tuomi, Pamela A; Murray, Michael J; Garner, Michael M; Goertz, Caroline E C; Nordhausen, Robert W; Burek-Huntington, Kathleen A; Getzy, David M; Nielsen, Ole; Archer, Linda L; Maness, Heather T D; Wellehan, James F X; Waltzek, Thomas B

    2014-07-01

    Small superficially ulcerated skin lesions were observed between October 2009 and September 2011 during captive care of two orphaned sea otter pups: one northern (Enhydra lutris kenyoni) in Alaska and one southern (Enhydra lutris nereis) in California. Inclusions consistent with poxviral infection were diagnosed by histopathology in both cases. Virions consistent with poxvirus virions were seen on electron microscopy in the northern sea otter, and the virus was successfully propagated in cell culture. DNA extraction, pan-chordopoxviral PCR amplification, and sequencing of the DNA-dependent DNA polymerase gene revealed that both cases were caused by a novel AT-rich poxvirus. Bayesian and maximum likelihood phylogenetic analyses found that the virus is divergent from other known poxviruses at a level consistent with a novel genus. These cases were self-limiting and did not appear to be associated with systemic illness. To our knowledge, this is the first report of a poxvirus in a mustelid species. The source of this virus, mode of transmission, zoonotic potential, and biological significance are undetermined. PMID:24807180

  9. Reactive iron and manganese distributions in seabed sediments near small mountainous rivers off Oregon and California (USA)

    Science.gov (United States)

    Roy, Moutusi; McManus, James; Goñi, Miguel A.; Chase, Zanna; Borgeld, Jeffry C.; Wheatcroft, Robert A.; Muratli, Jesse M.; Megowan, Meghan R.; Mix, Alan

    2013-02-01

    We examined the spatial distribution of sedimentary reactive iron (FeR) and manganese (MnR) along the continental shelf near the mouth of the Umpqua River, Oregon (USA). A well-defined muddy (silt+clay) depocenter of fluvial origin characterizes this part of the Oregon margin. Reactive Fe and Mn contents are elevated within the silt-rich landward edge of the depocenter. Away from this depocenter, sediments are predominantly sandy both along the inner-shelf (˜150 m depth) and have elevated FeR and MnR. Based on their correlation with sediment grain size, it appears that FeR and to a lesser extent MnR, are associated with mud size sediments. Reactive metal concentration is also positively correlated with organic carbon (OC) content, indicating a potentially common source. Seabed sediments from five other small, mountainous river systems (Klamath, Eel, Navarro, Russian, and Salinas) located south of Umpqua show the same general relationship between FeR and OC. Although both FeR and MnR exhibit similar relationships to grain size and OC, the relationships with MnR exhibit considerable scatter. Comparison of Umpqua River suspended sediment data with the seabed data suggests that MnR is more prone to loss from sediment particles during transit to the seabed as compared to FeR, and this difference explains why FeR maintains a reasonably tight relationship with organic carbon and particle size along the seafloor relative to MnR.

  10. Seismic and aseismic deformations and impact on reservoir permeability: The case of EGS stimulation at The Geysers, California, USA

    Science.gov (United States)

    Jeanne, Pierre; Rutqvist, Jonny; Rinaldi, Antonio Pio; Dobson, Patrick F.; Walters, Mark; Hartline, Craig; Garcia, Julio

    2015-11-01

    In this paper, we use the Seismicity-Based Reservoir Characterization approach to study the spatiotemporal dynamics of an injection-induced microseismic cloud, monitored during the stimulation of an enhanced geothermal system, and associated with the Northwest Geysers Enhanced Geothermal System (EGS) Demonstration project (California). We identified the development of a seismically quiet domain around the injection well surrounded by a seismically active domain. Then we compare these observations with the results of 3-D Thermo-Hydro-Mechanical simulations of the EGS, which accounts for changes in permeability as a function of the effective normal stress and the plastic strain. The results of our modeling show that (1) the aseismic domain is caused by both the presence of the injected cold water and by thermal processes. These thermal processes cause a cooling-stress reduction, which prevent shear reactivation and favors fracture opening by reducing effective normal stress and locally increasing the permeability. This process is accompanied by aseismic plastic shear strain. (2) In the seismic domain, microseismicity is caused by the reactivation of the preexisting fractures, resulting from an increase in injection-induced pore pressure. Our modeling indicates that in this domain, permeability evolves according to the effective normal stress acting on the shear zones, whereas shearing of preexisting fractures may have a low impact on permeability. We attribute this lack of permeability gain to the fact that the initial permeabilities of these preexisting fractures are already high (up to 2 orders of magnitude higher than the host rock) and may already be fully dilated by past tectonic straining.

  11. Prediction model for sequence variation in the glycoprotein gene of infectious hematopoietic necrosis virus in California, U.S.A.

    Science.gov (United States)

    Kelley, Garry O; Garabed, Rebecca; Branscum, Adam; Perez, Andres; Thurmond, Mark

    2007-12-13

    The influence of spatio-temporal factors on genetic variation of infectious hematopoietic necrosis virus (IHNV) is an active area of research. Using host-isolate pairs collected from 1966 to 2004 for 237 IHNV isolates from California and southern Oregon, we examined genetic variation of the mid-G gene of IHNV that could be quantified across times and geographic locations. Information hypothesized to influence genetic variation was environmental and/or fish host demographic factors, viz. location (inland or coastal), year of isolation, habitat (river, lake, or hatchery), the agent factors of subgroup (LI or LII) and serotype (1, 2, or 3), and the host factors of fish age (juvenile or adult), sex (male or female), and season of spawning run (spring, fall, late fall, winter). Inverse distance weighting (IDW) was performed to create isopleth maps of the genetic distances of each subgroup. IDW maps showed that more genetic divergence was predicted for isolates found inland (for both subgroups: LI and LII) than for coastal watershed isolates. A mixed-effect beta regression with a logit link function was used to seek associations between genetic distances and hypothesized explanatory factors. The model that best described genetic distance contained the factors of location, year of isolation, and the interaction between location and year. Our model suggests that genetic distance was greater for isolates collected from 1966 to 2004 at inland locations than for isolates found in coastal watersheds during the same years. The agreement between the IDW and beta regression analyses quantitatively supports our conclusion that, during this time period, more genetic variation existed within subgroup LII in inland watersheds than within coastal LI isolates. PMID:18286806

  12. Isotopic measurements of atmospheric methane in Los Angeles, California, USA: Influence of “fugitive” fossil fuel emissions

    Science.gov (United States)

    Townsend-Small, Amy; Tyler, Stanley C.; Pataki, Diane E.; Xu, Xiaomei; Christensen, Lance E.

    2012-04-01

    Recent studies have suggested that CH4 emissions in Los Angeles and other large cities may be underestimated. We utilized stable isotopes (13C and D) and radiocarbon (14C) to investigate sources of CH4 in Los Angeles, California. First, we made measurements of δ13C and δD of various CH4 sources in urban areas. Fossil fuel CH4 sources (oil refineries, power plants, traffic, and oil drilling fields) had δ13C values between -45 and -30‰ and dD values between -275 and -100‰, whereas biological CH4 (cows, biofuels, landfills, sewage treatment plants, and cattle feedlots) had δ13C values between -65 and -45‰ and δD values between -350 and -275‰. We made high-altitude observations of CH4 concentration using continuous tunable laser spectroscopy measurements combined with isotope analyses (13C, 14C, and D) of discrete samples to constrain urban CH4 sources. Our data indicate that the dominant source of CH4 in Los Angeles has a δ13C value of approximately -41.5‰ and a δD value between -229 and -208‰. Δ14C of CH4 in urban air samples ranged from +262 to +344‰ (127.1 to 134.9 pMC), depleted with respect to average global background CH4. We conclude that the major source of CH4 in Los Angeles is leakage of fossil fuels, such as from geologic formations, natural gas pipelines, oil refining, and/or power plants. More research is needed to constrain fluxes of CH4 from natural gas distribution and refining, as this flux may increase with greater reliance on natural gas and biogas for energy needs.

  13. PEAT ACCRETION HISTORIES DURING THE PAST 6000 YEARS IN MARSHES OF THE SACRAMENTO - SAN JOAQUIN DELTA, CALIFORNIA, USA

    Energy Technology Data Exchange (ETDEWEB)

    Drexler, J Z; de Fontaine, C S; Brown, T A

    2009-07-20

    Peat cores were collected in 4 remnant marsh islands and 4 drained, farmed islands throughout the Sacramento - San Joaquin Delta of California in order to characterize the peat accretion history of this region. Radiocarbon age determination of marsh macrofossils at both marsh and farmed islands showed that marshes in the central and western Delta started forming between 6030 and 6790 cal yr BP. Age-depth models for three marshes were constructed using cubic smooth spline regression models. The resulting spline fit models were used to estimate peat accretion histories for the marshes. Estimated accretion rates range from 0.03 to 0.49 cm yr{sup -1} for the marsh sites. The highest accretion rates are at Browns Island, a marsh at the confluence of the Sacramento and San Joaquin rivers. Porosity was examined in the peat core from Franks Wetland, one of the remnant marsh sites. Porosity was greater than 90% and changed little with depth indicating that autocompaction was not an important process in the peat column. The mean contribution of organic matter to soil volume at the marsh sites ranges from 6.15 to 9.25% with little variability. In contrast, the mean contribution of inorganic matter to soil volume ranges from 1.40 to 8.45% with much greater variability, especially in sites situated in main channels. These results suggest that marshes in the Delta can be viewed as largely autochthonous vs. allochthonous in character. Autochthonous sites are largely removed from watershed processes, such as sediment deposition and scour, and are dominated by organic production. Allochthonous sites have greater fluctuations in accretion rates due to the variability of inorganic inputs from the watershed. A comparison of estimated vertical accretion rates with 20th century rates of global sea-level rise shows that currently marshes are maintaining their positions in the tidal frame, yet this offers little assurance of sustainability under scenarios of increased sea-level rise in

  14. Luminescence chronologies for sediments recording paleoseismic events and slip rate for the central Garlock fault, California, USA

    Science.gov (United States)

    Okubo, S. G.; Wolf, E.; Roder, B. J.; Rhodes, E. J.; McGill, S. F.; Dolan, J. F.; Mcauliffe, L. J.; Lawson, M. J.; Barrera, W. A.

    2012-12-01

    Luminescence dating has a significant role to play in providing chronological control for lacustrine and alluvial sediments that record both tectonic and climatic events. However, poor characteristics in some environments mean that the well-established method of OSL (optically stimulated luminescence) dating of quartz is not well-suited for the material available. In order to overcome this significant limitation, a range of methods based on the IRSL (infra-red stimulated luminescence) and ITL (isothermal thermoluminescence) of K-feldspar are currently under development. The site of El Paso Peaks, California has an established C-14 chronology spanning the last 7,000 years for a series of playa sediments comprising silts and fine sands, with occasional incursions of coarser sands and gravels from the alluvial fan that forms one side of the small ephemeral lake basin. Another barrier is formed by a shutter ridge of the left-lateral central Garlock fault, and this succession of sediments records at least six seismic events. Following collection of a suite of 24 luminescence samples distributed throughout the upper part of this succession, this site provides a rare opportunity to test different luminescence dating protocols in a rigorous fashion. At the site of Christmas Canyon West, a few miles further east, numerous small offsets of depositional and erosional alluvial fan features provide the opportunity to determine slip rates for a variety of timescales spanning the past couple of thousand years, besides forming a record of the timing of several discrete depositional episodes representing local high precipitation events. We review the challenges involved in developing a reliable luminescence chronology for sediment deposition in these contexts, and in relating this chronology to significant environmental events.

  15. EDITORIAL: Proceedings of the 8th International LISA Symposium, Stanford University, California, USA, 28 June-2 July 2010 Proceedings of the 8th International LISA Symposium, Stanford University, California, USA, 28 June-2 July 2010

    Science.gov (United States)

    Buchman, Sasha; Sun, Ke-Xun

    2011-05-01

    (CQG) and Journal of Physics: Conference Series (JPCS). The plenary lectures are published in CQG, while most parallel talks and posters are being published in JPCS. At the recommendation of the science organization committee (SOC) other selected work from the conference will also appear in CQG. All papers in CQG have been screened through the journal's regular peer review process. We gratefully acknowledge the support of the CQG and JPCS Publishers and staff for the publication of the proceedings. The symposium and proceedings are generously sponsored by L'Agenzia Spaziale Italiana, the California Institute of Technology, EADS Astrium Germany, the KACST Foundation Saudi Arabia, the LIGO collaboration, the Max-Planck Institute in Potsdam, Germany, NASA, and the National Science Foundation. Stanford University made very significant contributions through the Dean of Research Office, the Department of Applied Physics, the Department of Physics, the Hansen Experimental Physics Laboratory (HEPL), and the SLAC National Accelerator Laboratory. We thank the Stanford local organization committee (LOC), administration and professional staff, KACST engineers, and graduate students for their support of the symposium operations. LISA is one of the most tantalizing yet challenging scientific space missions ever. The 8th International LISA Symposium and publication of the proceedings contribute to its progress. Sasha Buchman and Ke-Xun Sun Stanford University Guest Editors

  16. Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California; 2015

    Science.gov (United States)

    Cain, Daniel J.; Thompson, Janet K.; Crauder, Jeffrey; Parchaso, Francis; Stewart, Robin; Turner, Matthew; Hornberger, Michelle I.; Luoma, Samuel N.

    2016-01-01

    Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, California. This report includes data collected by U.S. Geological Survey (USGS) scientists for the period from January 2015 to December 2015. These data are appended to long-term datasets extending back to 1974, and serve as the basis for the City of Palo Alto’s Near-Field Receiving Water Monitoring Program, initiated in 1994.

  17. A GLOBAL TALENT MAGNET: How a San Francisco/Bay Area Higher Education Hub Could Advance California’s Comparative Advantage In Attracting International Talent and Further Build US Economic Competitiveness

    OpenAIRE

    John Aubrey Douglass, Richard Edelstein and Cecile Hoareau

    2011-01-01

    During the 2009-10 academic year international students generated more than $18.8 billion in net income into the US economy. California alone had nearly 100,000 international students with an economic impact of nearly $3.0 billion. In this paper, we outline a strategy for the San Francisco/Bay Area to double the number of international students enrolled in local colleges and universities in ten years or less, generating a total direct economic impact of an additional $1 billion a year into th...

  18. Optical ages indicate the southwestern margin of the Green Bay Lobe in Wisconsin, USA, was at its maximum extent until about 18,500 years ago

    Science.gov (United States)

    Attig, J.W.; Hanson, P.R.; Rawling, J.E.; Young, A.R.; Carson, E.C.

    2011-01-01

    Samples for optical dating were collected to estimate the time of sediment deposition in small ice-marginal lakes in the Baraboo Hills of Wisconsin. These lakes formed high in the Baraboo Hills when drainage was blocked by the Green Bay Lobe when it was at or very near its maximum extent. Therefore, these optical ages provide control for the timing of the thinning and recession of the Green Bay Lobe from its maximum position. Sediment that accumulated in four small ice-marginal lakes was sampled and dated. Difficulties with field sampling and estimating dose rates made the interpretation of optical ages derived from samples from two of the lake basins problematic. Samples from the other two lake basins-South Bluff and Feltz basins-responded well during laboratory analysis and showed reasonably good agreement between the multiple ages produced at each site. These ages averaged 18.2. ka (n= 6) and 18.6. ka (n= 6), respectively. The optical ages from these two lake basins where we could carefully select sediment samples provide firm evidence that the Green Bay Lobe stood at or very near its maximum extent until about 18.5. ka.The persistence of ice-marginal lakes in these basins high in the Baraboo Hills indicates that the ice of the Green Bay Lobe had not experienced significant thinning near its margin prior to about 18.5. ka. These ages are the first to directly constrain the timing of the maximum extent of the Green Bay Lobe and the onset of deglaciation in the area for which the Wisconsin Glaciation was named. ?? 2011 Elsevier B.V.

  19. Fluid origin, gas fluxes and plumbing system in the sediment-hosted Salton Sea Geothermal System (California, USA)

    Science.gov (United States)

    Mazzini, Adriano; Svensen, Henrik; Etiope, Giuseppe; Onderdonk, Nathan; Banks, David

    2011-08-01

    The Salton Sea Geothermal System (California) is an easily accessible setting for investigating the interactions of biotic and abiogenic geochemical processes in sediment-hosted hydrothermal systems. We present new temperature data and the molecular and isotopic composition of fluids seeping at the Davis-Schrimpf seep field during 2003-2008. Additionally, we show the first flux data for CO 2 and CH 4 released throughout the field from focused vents and diffuse soil degassing. The emitted gases are dominated by CO 2 (~ 98%) and CH 4 (~ 1.5%). By combining δ 13C CO2 (as low as - 5.4‰) and δ 13C CH4 (- 32‰ to - 17.6‰) with 3He/ 4He (R/Ra > 6) and δD CH4 values (- 216‰ to - 150‰), we suggest, in contrast to previous studies, that CO 2 may have a significant Sub-Continental Mantle source, with minimal crustal contamination, and CH 4 seems to be a mixture of high temperature pyrolitic (thermogenic) and abiogenic gas. Water seeps show that δD and δ 18O increase proportionally with salinity (Total Dissolved Solids in g/L) ranging from 1-3 g/L (gryphons) to 145 g/L (hypersaline pools). In agreement with elemental analyses, the isotopic composition of the waters indicate a meteoric origin, modified by surface evaporation, with little or no evidence of deep fossil or magmatic components. Very high Cl/Br (> 3,000) measured at many seeping waters suggests that increased salinities result from dissolution of halite crusts near the seep sites. Gas flux measurements from 91 vents (pools and gryphons) give a conservative estimate of ~ 2,100 kg of CO 2 and 11.5 kg of CH 4 emitted per day. In addition soil degassing measured at 81 stations (20x20 m grid over 51,000 m 2) revealed that 7,310 kg/d CO 2 and 33 kg/d CH 4 are pervasively released to the atmosphere. These results emphasise that diffuse gas emission from soil can be dominant (~ 75%) even in hydrothermal systems with large and vigorous gas venting. Sediment-hosted hydrothermal systems may represent an

  20. A Geochemical Exploration of the Sagehen Volcanic Centre, Truckee-Tahoe Region, California, U.S.A

    Science.gov (United States)

    Clarke, Christopher Angus Leo

    The assemblage of ca. 6--4 Ma volcanic rocks exposed at the Sagehen Research station in the Truckee-Tahoe region of the northern Sierra Nevada, United States, is interpreted to be, within the Ancestral Cascades volcanic arc, a Lassen-type stratovolcano complex. Sagehen is of particular importance because it is one of the few Tertiary arc volcanic centres in California which has not been heavily glaciated during the Pleistocene. The volcanic rocks are variably porphyritic or aphanitic, including abundant plagioclase with clinopyroxene and amphibole. The rocks range from basalt to basaltic-andesite to andesite in composition. Basalts are olivine- and clinopyroxene-bearing with minor phenocrysts of plagioclase. The basaltic-andesites are primarily pyroxene bearing while the andesites contain pyroxene-, plagioclase- and hornblende porphyritic phases. Sagehen arc lavas are calc-alkaline and enriched in the large ion lithophile elements and depleted in High Field Strength Elements. The basalts are depleted in Zr and Hf while the andesites are enriched with Zr and Hf relative to the middle rare earth elements. Compared to previously studied Ancestral Cascade arc samples, Sagehen region basalts have lower 143Nd/144Nd isotopic values that do not correspond to proposed mantle-lithosphere mixing lines, while the andesite samples appear to represent the interplay of these two components on a 87Sr/ 86Sr vs. 143Nd/144Nd. The trace element data and isotopic plots suggest that the melts that produced the basalts are from subduction modified mantle wedge peridotites that ponded near the base of the lithosphere similar to the generation of other subduction related calc-alkaline lavas along convergent continental margins. The andesitic samples appear to be the result of further modification through crustal assimilation as seen in the higher isotopic Sr contents in the andesites and Ce/Smpmn vs. Tb/Ybpmn plots. Finally, the proposed map units from Sylvester & Raines (2007) were found

  1. Concentration, UV-spectroscopic characteristics and fractionation of DOC in stormflow from an urban stream, Southern California, USA

    Science.gov (United States)

    Izbicki, J.A.; Pimentel, I.M.; Johnson, R.; Aiken, G.R.; Leenheer, J.

    2007-01-01

    The composition of dissolved organic carbon (DOC) in stormflow from urban areas has been greatly altered, both directly and indirectly, by human activities and there is concern that there may be public health issues associated with DOC, which has unknown composition from different sources within urban watersheds. This study evaluated changes in the concentration and composition of DOC in stormflow in the Santa Ana River and its tributaries between 1995 and 2004 using a simplified approach based on the differences in the optical properties of DOC and using operationally defined differences in molecular weight and solubility. The data show changes in the composition of DOC in stormflow during the rainy season and differences associated with runoff from different parts of the basin, including extensive upland areas burned prior to the 2004 rainy season. Samples were collected from the Santa Ana River, which drains ???6950 km2 of the densely populated coastal area of southern California, during 23 stormflows between 1995 and 2004. Dissolved organic carbon (DOC) concentrations during the first stormflows of the ?winter' (November to March) rainy season increased rapidly with streamflow and were positively correlated with increased faecal indicator bacteria concentrations. DOC concentrations were not correlated with streamflow or with other constituents during stormflows later in the rainy season and DOC had increasing UV absorbance per unit carbon as the rainy season progressed. DOC concentrations in stormflow from an urban drain tributary to the river also increased during stormflow and were greater than concentrations in the river. DOC concentrations in stormflow from a tributary stream, draining urban and agricultural land that contained more than 320 000 animals, mostly dairy cows, were higher than concentrations in stormflow from the river and from the urban drain. Fires that burned large areas of the basin before the 2004 rainy season did not increase DOC

  2. Wetland Plant Physiology Exhibits Controls on Carbon Sequestration Processes in a Restored Temperate Peatland of California, USA

    Science.gov (United States)

    Windham-Myers, L.; Byrd, K. B.; Khanna, S.; Miller, R.; Anderson, F.

    2011-12-01

    Wetland soils, especially peatlands, serve as the leading long-term sink of carbon (C) in the terrestrial biosphere, representing ~5% of global terrestrial ecosystem acreage but ~25% of total stored terrestrial organic C. While inhibition of microbial respiration rates is a necessary component of peat formation, plant processes regulate gross and net organic matter production (GPP and NPP) and microbial respiration in the rhizosphere. Recent work in a 14-year-old, 6-ha experimental wetland complex in the California's Sacramento-San Joaquin Delta has documented that continuous flooding at 25 cm depth can generate peat growth averaging 1 kg C m-2 y-1, and elevation gains approaching 4 cm y-1, 40-fold greater than historic rates tied to mean sea level rise (1mm y-1). To determine macrophyte controls on organic matter production and respiration in emergent marsh habitats, plant physiological processes were examined for 3 dominant species: hardstem bulrush (Schoenoplectus acutus), narrowleaf and broadleaf cattail (Typha angustifolia and T. latifolia). Leaf-level photosynthetic rates (GPP) were collected monthly with a LiCor 6400XT in May-September of 2010 and 2011 across a gradient of water residence time. GPP, stomatal conductance, photosynthetically active radiation (PAR), relative humidity and leaf temperatures were assessed from pre-dawn to solar-noon to assess light-use (LUE) and water-use efficiency (WUE) for carbon assimilation (A). CO2 levels (Ci) were regulated to generate A-Ci curves, indicating leaf capacity to assimilate recycled CO2. Porewater acetate concentrations and live root concentrations of ethanol and acetaldehyde were assayed seasonally in 2011 as relative indices of fermentative respiration. Plant species distribution, NPP and leaf-area indices (LAI) were calculated using allometric relationships, and used to scale-up leaf-level GPP estimates, as well as to ground-truth high-resolution CIR imagery, to compare NDVIs with recent hyperspectral data

  3. Patterns of volcanism, weathering, and climate history from high-resolution geochemistry of the BINGO core, Mono Lake, California, USA

    Science.gov (United States)

    Zimmerman, S. R.; Starratt, S.; Hemming, S. R.

    2012-12-01

    Mono Lake, California is a closed-basin lake on the east side of the Sierra Nevada, and inflow from snowmelt dominates the modern hydrology. Changes in wetness during the last glacial period (>12,000 years ago) and over the last 2,000 years have been extensively described, but are poorly known for the intervening period. We have recovered a 6.25 m-long core from ~3 m of water in the western embayment of Mono Lake, which is shown by initial radiocarbon dates to cover at least the last 10,000 years. The sediments of the core are variable, ranging from black to gray silts near the base, laminated olive-green silt through the center, to layers of peach-colored carbonate nodules interbedded with gray and olive silts and pea-green organic ooze. Volcanic tephras from lake level and chemistry. Titanium (Ti) is chemically and biologically unreactive, and records the dominant input, from weathering of Sierra Nevada granite to the west and Miocene and Pliocene volcanic rocks of the Bodie and Adobe Hills to the north, east, and south. The rhyolitic tephras of the Mono-Inyo Craters are much lower in TiO2 than the bedrock (lake during periods of regression. The lowermost 1.5 m of the BINGO core contains the highest proportion of detrital input to Mono Lake over the last ~12,000 years, recorded by high Si, Ti, K, and Fe, in black to dark-gray, fine-grained silts above 10 cm of pure light gray silt. Based on radiocarbon dates of >10,000 calibrated years before present (cal yr BP) higher in the core, and significant disruption of the fine layers, this interval likely indicates a relatively deep lake persisting into the early Holocene, after the initial dramatic regression from late Pleistocene levels. The finely laminated olive-green silt of the period ~10,700 to ~7500 cal yr BP is very homogenous chemically, probably indicating a stable, stratified lake and a relatively wet climate. This section merits mm-scale scanning and petrographic examination in the future. The upper

  4. Surface motion of active rock glaciers in the Sierra Nevada, California, USA: inventory and a case study using InSAR

    Directory of Open Access Journals (Sweden)

    Lin Liu

    2013-01-01

    Full Text Available Despite the abundance of rock glaciers in the Sierra Nevada of California, USA, few efforts have been made to measure their surface flow. Here we use the interferometric synthetic aperture radar (InSAR technique to compile a~benchmark inventory describing the kinematic state of 59 active rock glaciers in this region. Statistically, these rock glaciers moved at speeds range from 15 cm yr−1 to 88 cm yr−1 with a mean value of 55 cm yr−1 in the late summer of 2007. We also find a spatial gradient: rock glaciers in the southern Sierra Nevada moved faster than the ones in the central Sierra Nevada. In addition to the inventory mapping, we also conduct a case study to measure the surface flow of the Mount Gibbs rock glacier in fine spatial and temporal detail. The InSAR measurements over this target reveal (1 that the spatial pattern of surface flow is influenced by surface geomorphological features and (2 a significant seasonal variation of flow speed whose peak value was 48 cm yr−1 in the fall, more than twice the minimum value observed in the spring. The seasonal variation lagged air temperatures by three months and likely results from temporal changes in mechanical strength of mixing debris and ice, internal melting of ice, and surface snow cover. Our finding on the seasonal variation of surface speed reinforces the importance of a long time series with high temporal sampling rates to detect possible long-term changes of rock glaciers in a warming climate.

  5. The high cost of motherhood: End-lactation syndrome in southern sea otters (Enhydra lutris nereis) on the central California, USA, coast

    Science.gov (United States)

    Chinn, Sarah S; Miller, Melissa A.; Tinker, M. Tim; Staedler, Michelle M.; Batac, Francesca I.; Dodd, Erin M.; Henkel, Laird A.

    2016-01-01

    Sea otters (Enhydra lutris) have exceptionally high energetic requirements, which nearly double during lactation and pup care. Thus, females are extremely vulnerable to caloric insufficiency. Despite a number of compensatory strategies, the metabolic challenge of reproduction culminates in numerous maternal deaths annually. Massive depletion of energy reserves results in a case presentation that we define as end-lactation syndrome (ELS), characterized by moderate to severe emaciation not attributable to a concurrent, independent disease process in females dying during late pup care or postweaning. We compiled detailed data for 108 adult female southern sea otters (Enhydra lutris nereis) examined postmortem that stranded in California, USA, 2005–12, and assessed pathology, reproductive status, and the location and timing of stranding. We introduce simple, grossly apparent, standardized physical criteria to assess reproductive stage for female sea otters. We also describe ELS, examine associated risk factors, and highlight female life history strategies that likely optimize reproduction and survival. Our data suggest that females can reset both the timing and energetic demands of reproduction through fetal loss, pup abandonment, or early weaning as part of specific physiologic checkpoints during each reproductive cycle. Females appear to preload nutritionally during delayed implantation and gestation to increase fitness and reproductive success. We found that ELS was a major cause of death, affecting 56% of enrolled adult females. Peak ELS prevalence occurred in late spring, possibly reflecting the population trend toward fall/winter pupping. Increasing age and number of pregnancies were associated with a higher risk of ELS. Although the proportion of ELS females was highest in areas with dense sea otter populations, cases were recovered throughout the range, suggesting that death from ELS is associated with, but not solely caused by, population resource limitation.

  6. Detection of erosion events using 10Be profiles: example of the impact of agriculture on soil erosion in the Chesapeake Bay area (U.S.A.)

    Science.gov (United States)

    Valette-Silver, J. N.; Brown, L.; Pavich, M.; Klein, J.; Middleton, R.

    1986-01-01

    10Be concentration, total carbon and grain-size were measured in cores collected in undisturbed estuarine sediments of three tributaries of the Chesapeake Bay. These cores were previously studied by Davis [1] and Brush [2,3] for pollen content, age and sedimentation rate. In this work, we compare the results obtained for these various analyses. In the cores, we observed two increases in 10Be concentration concomitant with two major changes in the pollen composition of the sediments. These two pollen changes each correspond to well-dated agricultural horizons reflecting different stages in the introduction of European farming techniques [2]. In the Chesapeake Bay area, the agricultural development, associated with forest clearing, appears to have triggered the erosion, transport, and sedimentation into the river mouths of large quantities of 10Be-rich soils. This phenomenon explains the observed rise in the sedimentation rate associated with increases in agricultural land-use. ?? 1986.

  7. The impact of urban expansion and agricultural legacies on trace metal accumulation in fluvial and lacustrine sediments of the lower Chesapeake Bay basin, USA.

    Science.gov (United States)

    Coxon, T M; Odhiambo, B K; Giancarlo, L C

    2016-10-15

    The progressively declining ecological condition of the Chesapeake Bay is attributed to the influx of contaminants associated with sediment loads supplied by its largest tributaries. The continued urban expansion in the suburbs of Virginia cities, modern agricultural activities in the Shenandoah Valley, the anthropogenic and climate driven changes in fluvial system hydrodynamics and their potential associated impacts on trace metals enrichment in the bay's tributaries necessitate constant environmental monitoring of these important water bodies. Eight (210)Pb and (137)Cs dated sediment cores and seventy two sediment grab samples were used to analyze the spatial and temporal distributions of Al, Ca, Mg, Cr, Cd, As, Se, Pb, Cu, Zn, Mn, and Fe in the waterways of the Virginia portion of the Chesapeake Bay basin. The sediment cores for trace metal historical fluctuation analysis were obtained in lower fluvial-estuarine environments and reservoirs in the upper reaches of the basin. The trace metal profiles revealed high basal enrichment factors (EF) of between 0.05 and 40.24, which are interpreted to represent early nineteenth century agricultural activity and primary resource extraction. Surficial enrichment factors on both cores and surface grab samples ranged from 0.01 (Cu) to 1421 (Cd), with Pb, Cu, Zn, and Cd enrichments a plausible consequence of modern urban expansion and industrial development along major transportation corridors. Contemporary surficial enrichments of As, Se, and Cr also ranged between 0 and 137, with the higher values likely influenced by lithological and atmospheric sources. Pearson correlation analyses suggest mining and agricultural legacies, coupled with aerosol deposition, are responsible for high metal concentrations in western lakes and headwater reaches of fluvial systems, while metal accumulation in estuarine reaches of the major rivers can be attributed to urban effluence and the remobilization of legacy sediments. PMID:27310532

  8. Building the city with emphasis on urban mobility – examples from USA

    Directory of Open Access Journals (Sweden)

    Mojca Šašek Divjak

    2002-01-01

    Full Text Available In the last decades developed countries have tried to improve and strengthen public transport modes in urban regions, because they have established negative effects of car traffic on mobility: bottlenecks, increased investment in road infrastructure. New movements that have emerged in the nineties in USA, often coined as smart growth, emphasise efficient urban growth, which should be tied to public transport enabling rational prices of infrastructure and better spatial use. Good examples of such developments are shown, such as the San Francisco Bay area (California, Portland (Oregon and Salt Lake (Utah.

  9. A new species of Apolochus (Crustacea, Amphipoda, Gammaridea, Amphilochidae) in Maryland coastal bays, USA with notes on its abundance and distribution.

    Science.gov (United States)

    Morales-Núñez, Andrés G; Chigbu, Paulinus

    2016-01-01

    A new amphilochid amphipod, Apolochus cresti sp. n. is described from specimens collected in the shallow waters of Maryland coastal bays, Mid-Atlantic region, at depths from 1.7 to 2.1 m. The new species appears to be most closely related to the northeastern Atlantic species, Apolochus neapolitanus sensu Krapp-Schickel, 1982. Apolochus cresti sp. n. can be distinguished from Apolochus neapolitanus by a combination of characters, including the shape of the lateral cephalic lobe, shape of the mandible molar process, relative length of mandible palp article 3, the carpal lobe length of gnathopod 2, and the lack of sub-marginal spines on antero-lateral surface of gnathopod 2. Spearman's rank correlation analysis indicated a positive correlation between the abundance of Apolochus cresti and the amount of macroalgae collected per station, bay, and month. Ovigerous females carrying eggs were present from March to May and in October, reaching their peak in May, although only ovigerous females carrying juveniles were found in May. Males were abundant in March and were collected also in May and October. A key for the separation of Apolochus species is presented. PMID:27110159

  10. Fine Resolution Tree Height Estimation from Lidar Data and Its Application in SRTM DEM Correction across Forests of Sierra Nevada, California, USA

    Science.gov (United States)

    Su, Y.; Guo, Q.; Ma, Q.; Li, W.

    2015-12-01

    Sierra Nevada (SN) is a mountain range located in the northeastern California, USA, covering an area of 63,100 km2. As one of the most diverse temperate conifer forests on the Earth, forests of SN serve a series of ecosystem functions and are valuable natural heritages for the region and even the country. The still existed gap of accurate fine-resolution tree height estimation has lagged ecological, hydrological and forestry studies within the region. Moreover, the Shuttle Radar Topography Mission (SRTM) digital elevation model (DEM), as one of the most frequently used land surface elevation product in the region, has been proved systematically higher than actual land surface in vegetated mountain areas due to the absorption and reflection effects of canopy on the SRTM radar signal. An accurate fine resolution tree height product across the region is urgently needed for developing models to correct SRTM DEM. In this study, we firstly developed a method to estimate SN tree height distribution (defined by Lorey's height) through the combination of airborne lidar data, spaceborne lidar data, optical imagery, climate surfaces, and field measurements. Over 5 470 km2airborne lidar data and 1 000 plot measurements were collected across the SN to address this mission. Our method involved three main steps: 1) estimate tree heights within airborne lidar footprints using step-wise regression; 2) link the airborne lidar derived tree height to spaceborne lidar data and compute tree heights at spaceborne lidar footprints; 3) extrapolate tree height estimation from spaceborne lidar footprints to the whole region using Random Forest. The obtained SN tree height product showed good correspondence with independent field plot measurements. The coefficient of determination is higher than 0.65, and the root-mean-square error is around 5 m. With the obtained tree height product, we further explored the possibility of correcting SRTM DEM. The results showed that the obtained tree height

  11. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2005

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2005 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  12. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2006

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2006 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  13. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2004

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2004 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  14. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2007

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2007 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  15. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2008

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2008 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  16. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2009

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2009 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  17. Don Edwards San Francisco Bay National Wildlife Refuge : Self Monitoring Program for Alviso Ponds Within South San Francisco Bay Low Salinity Salt Ponds Alameda, Santa Clara, and San Mateo Counties, California : 2010

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This annual report summarizes the results of the 2010 water quality sampling conducted at the Alviso Ponds in Santa Clara County, California, which are part of the...

  18. ORTHOIMAGERY, SOLANO COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — Digital orthographic imagery datasets contain georeferenced images of the Earth's surface, collected by a sensor in which object displacement has been removed for...

  19. Historical methyl mercury in San Francisco Bay

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — San Francisco Bay, California is considered a mercury-impaired watershed. Elevated concentrations of mercury are found in water and sediment as well as fish and...

  20. South Bay Salt Ponds : Initial stewardship plan

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The California Department of Fish and Game and the U.S. Fish and Wildlife Service will operate and maintain the South Bay Salt Ponds under this Initial Stewardship...

  1. Combined use of remote sensing and continuous monitoring to analyse the variability of suspended-sediment concentrations in San Francisco Bay, California

    Science.gov (United States)

    Ruhl, C.A.; Schoellhamer, D.H.; Stumpf, R.P.; Lindsay, C.L.

    2001-01-01

    Analysis of suspended-sediment concentration data in San Francisco Bay is complicated by spatial and temporal variability. In situ optical backscatterance sensors provide continuous suspended-sediment concentration data, but inaccessibility, vandalism, and cost limit the number of potential monitoring stations. Satellite imagery reveals the spatial distribution of surficial-suspended sediment concentrations in the Bay; however, temporal resolution is poor. Analysis of the in situ sensor data in conjunction with the satellite reflectance data shows the effects of physical processes on both the spatial and temporal distribution of suspended sediment in San Francisco Bay. Plumes can be created by large freshwater flows. Zones of high suspended-sediment concentrations in shallow subembayments are associated with wind-wave resuspension and the spring-neap cycle. Filaments of clear and turbid water are caused by different transport processes in deep channels, as opposed to adjacent shallow water.

  2. Spectral definition of the macro-algae Ulva curvata in the back-barrier bays of the Eastern Shore of Virginia, USA

    Science.gov (United States)

    Ramsey, Elijah W., III; Rangoonwala, Amina; Solgaard, Mads; Schwarzchild, Arthur

    2012-01-01

    We have developed methods to determine the visible (VIS) to near-infrared (NIR) spectral properties of thalli and epiphytes of bloom-forming and green macrophyte Ulva curvata in back-barrier lagoons in Virginia, USA. A 2% increase in NIR thalli reflectance from winter to summer matched the drop in summer NIR transmittance. In contrast, summer and winter VIS reflectance were nearly identical while winter transmittance was 10-20% higher. NIR absorption remained at 5% but VIS absorption increased by 10-20% from winter to summer. Replicate consistency substantiated the high transmittance difference indicating thallus composition changed from summer to winter. Epiphytes increased thallus reflectance and decreased transmittance and exhibited broadband VIS and NIR absorptions in summer and selective peaks in winter. A simulation coupling water extinction with thallus reflectance and transmittance found seven submerged thalli maximized the surface reflectance enhancement.

  3. Patrón de transporte de sedimento en Bahía Magdalena, Baja California Sur, México, inferido del análisis de tendencias granulométricas Sediment transport patterns in Magdalena Bay, Baja California Sur, Mexico, inferred from grain-size trends

    Directory of Open Access Journals (Sweden)

    Alberto Sánchez

    2010-01-01

    Full Text Available Las tendencias espaciales de los parámetros texturales (tamaño medio de grano, selección y asimetría en Bahía Magdalena, Baja California Sur, México, se calcularon a partir de 58 estaciones de muestreo, con la finalidad de inferir la trayectoria de los vectores residuales de transporte de sedimentos. Los análisis de las tendencias espaciales y de componentes principales aplicados a los parámetros texturales indicaron que el sedimento, con una buena selección, está asociado con arenas finas a muy finas. Los vectores residuales de transporte sugieren la presencia de dos giros en la dispersión de material clástico: (1 giro ciclónico en la parte central y profunda, y (2 giro anticiclónico en la región sureste de la bahía. Las trayectorias de las partículas sedimentarias tienen una excelente correlación con las corrientes residuales de marea dentro de la Bahía Magdalena.The grain-size trend analysis (grain size, sorting asymmetry was determined at 58 stations in order to infer the residual vectors of sediment transport in Magdalena Bay, Baja California Sur, Mexico. Grain-size trend analysis and principal components analysis were applied to textural sediment parameters. The results indicated that well-sorted sediment is associated with fine to very fine sand. The residual vector transport suggests the presence of two gyres in the dispersion of clastic material: (1 acycloneic gyre in the deeper, central part and (2 an acycloneic gyre in the southeast part of the bay. The sediment transport pattern is highly correlated with the residual tidal currents in Magdalena Bay.

  4. Distributions and fate of chlorinated pesticides, biomarkers and polycyclic aromatic hydrocarbons in sediments along a contamination gradient from a point-source in San Francisco Bay, California

    Science.gov (United States)

    Pereira, W.E.; Hostettler, F.D.; Rapp, J.B.

    1996-01-01

    The distribution and fate of chlorinated pesticides, biomarkers, and polycyclic aromatic hydrocarbons (PAHs) in surficial sediments along a contamination gradient in the Lauritzen Canal and Richmond Harbor in San Francisco Bay was investigated. Compounds were identified and quantified using gas chromatography-ion trap mass spectrometry. Biomarkers and PAHs were derived primarily from weathered petroleum. DDT was reductively dechlorinated under anoxic conditions to DDD and several minor degradation products, DDMU, DDMS, and DDNU. Under aerobic conditions, DDT was dehydrochlorinated to DDE and DBP. Aerobic degradation of DDT was diminished or inhibited in zones of high concentration, and increased significantly in zones of lower concentration: Other chlorinated pesticides identified in sediment included dieldrin and chlordane isomers. Multivariate analysis of the distributions of the DDTs suggested that there are probably two sources of DDD. In addition, DDE and DDMU are probably formed by similar mechanisms, i.e. dehydrochlorination. A steep concentration gradient existed from the Canal to the Outer Richmond Harbor, but higher levels of DDD than those found in the remainder of the Bay indicated that these contaminants are transported on particulates and colloidal organic matter from this source into San Francisco Bay. Chlorinated pesticides and PAHs may pose a potential problem to biota in San Francisco Bay.

  5. The Validity Chlorophyll-a Estimation by Sun Induced Fluorescence in Estuarine Waters: An Analysis of Long-term (2003-2011) Water Quality Data from Tampa Bay, Florida (USA)

    Science.gov (United States)

    Moreno-Madrinan, Max Jacobo; Fischer, Andrew

    2012-01-01

    Satellite observation of phytoplankton concentration or chlorophyll-a is an important characteristic, critically integral to monitoring coastal water quality. However, the optical properties of estuarine and coastal waters are highly variable and complex and pose a great challenge for accurate analysis. Constituents such as suspended solids and dissolved organic matter and the overlapping and uncorrelated absorptions in the blue region of the spectrum renders the blue-green ratio algorithms for estimating chlorophyll-a inaccurate. Measurement of sun-induced chlorophyll fluorescence, on the other hand, which utilizes the near infrared portion of the electromagnetic spectrum, may provide a better estimate of phytoplankton concentrations. While modelling and laboratory studies have illustrated both the utility and limitations of satellite baseline algorithms based on the sun induced chlorophyll fluorescence signal, few have examined the empirical validity of these algorithms using a comprehensive long term in situ data set. In an unprecedented analysis of a long term (2003-2011) in situ monitoring data from Tampa Bay, Florida (USA), we assess the validity of the FLH product from the Moderate Resolution Imaging Spectrometer (MODIS) against chlorophyll ]a and a suite of water quality parameters taken in a variety of conditions throughout a large optically complex estuarine system. A systematic analysis of sampling sites throughout the bay is undertaken to understand how the relationship between FLH and in situ chlorophyll-a responds to varying conditions within the estuary including water depth, distance from shore and structures and eight water quality parameters. From the 39 station for which data was derived, 22 stations showed significant correlations when the FLH product was matched with in situ chlorophyll-alpha data. The correlations (r2) for individual stations within Tampa Bay ranged between 0.67 (n=28, pless than 0.01) and-0.457 (n=12, p=.016), indicating that

  6. Impact of Hurricane Irene on Vibrio vulnificus and Vibrio parahaemolyticus concentrations in surface water, sediment and cultured oysters in the Chesapeake Bay, Maryland, USA

    Directory of Open Access Journals (Sweden)

    KristiSShaw

    2014-05-01

    Full Text Available To determine if a storm event (i.e., high winds, large volumes of precipitation could alter concentrations of Vibrio vulnificus and Vibrio parahaemolyticus in aquacultured oysters (Crassostrea virginica and associated surface water and sediment, this study followed a sampling timeline before and after Hurricane Irene impacted the Chesapeake Bay estuary in late August 2011. Aquacultured oysters were sampled from two levels in the water column: surface 0.3 m and near-bottom just above the sediment. Concentrations of each Vibrio spp. and associated virulence genes were measured in oysters with a combination of real-time PCR and most probable number enrichment methods, and in sediment and surface water with real-time PCR. While concentration shifts of each Vibrio species were apparent post-storm, statistical tests indicated no significant change in concentration change for either Vibrio species by location (surface or near bottom oysters or date sampled (oyster tissue, surface water and sediment concentrations. V. vulnificus in oyster tissue was correlated with total suspended solids (r=0.41, p=0.04, and V. vulnificus in sediment was correlated with secchi depth (r=-0.93, p< 0.01, salinity (r=-0.46, p=0.02, tidal height (r=-0.45, p=0.03, and surface water V. vulnificus (r=0.98, p< 0.01. V. parahaemolyticus in oyster tissue did not correlate with environmental measurements, but V. parahaemolyticus in sediment and surface water correlated with several measurements including secchi depth (r=-0.48, p=0.02[sediment]; r=-0.97 p< 0.01[surface water] and tidal height (r=-0.96. p< 0.01[sediment], r=-0.59,p< 0.01 [surface water]. The concentrations of Vibrio spp. were higher in oysters relative to other studies (average V. vulnificus 4x105 MPN g-1, V. parahaemolyticus 1x105 MPN g-1, and virulence-associated genes were detected in most oyster samples. This study provides a first estimate of storm-related Vibrio density changes in oyster tissues, sediment and

  7. Polychlorinated biphenyls (PCBs) and their hydroxylated metabolites (OH-PCBs) in harbor seal () livers from San Francisco Bay, California and Gulf of Maine

    OpenAIRE

    Park, June-Soo; Kalantzi, Olga Ioanna; Kopec, Dianne; Petreas, Myrto

    2009-01-01

    Abstract Bioaccumulation of endocrine disruptors in marine mammals positioned at the top of the food chain is of toxicological concern. Stranded four pup and ten adult harbor seal (Phoca vitulina) livers were collected from San Francisco Bay and the Gulf of Maine and analyzed for polychlorinated biphenyls (PCBs) and their hydroxylated metabolites (OH-PCBs). We used GC-ECD and GC-NCI/MS to investigate the presence of 28 PCBs and 8 OH-PCB metabolites, respectively. ?28PCB concentrati...

  8. Extracting Length and Time Scales of Downstream Suspended Transport from Sediment Budget Data: ~100 to 1000-yr Travel Times from the Appalachians to the Chesapeake Bay, U.S.A

    Science.gov (United States)

    Pizzuto, J. E.; Schenk, E.; Hupp, C. R.; Gellis, A.; Noe, G. B.; Williamson, E.; Karwan, D. L.; O'Neal, M. A.; Marquard, J.; Aalto, R. E.; Newbold, J. D.

    2013-12-01

    Watershed Best Management Practices (BMPs) are often designed to reduce loadings of sediments and particle-borne contaminants, but the temporal lag between BMP implementation and improvement in receiving water quality is difficult to assess because particles spend long periods in storage between transport events. Here we present a theory that describes the downstream movement of suspended sediment particles accounting for the time particles spend in storage based on sediment budget data (by grain-size fraction) and information on particle transit times through storage reservoirs. The theory is used to define a suspended-sediment transport-length scale that describes how far particles are carried during transport events, and to estimate a downstream particle velocity that includes time spent in storage. At five upland watersheds of the mid-Atlantic region of the U.S.A., transport-length scales for silt-clay range from 3.5-76.1 km, while those for sand range from 0.9-139.6 km. Stratigraphic data and radiometric dating for a typical eroding bank section suggest an averaged sediment transit time through floodplain storage of 488 years. Mean sediment velocities for silt-clay range from 0.0072-0.16 km/yr, while those for sand range from 0.0008-0.25 km/yr, 4 to 6 orders of magnitude slower than the velocity of water in the channel. These results suggest lag times of 100-1000 years between BMP implementation and effectiveness in receiving waters such as the Chesapeake Bay (where BMPs are located upstream of the characteristic transport length scale). Many particles likely travel much faster than these average values, so further research is needed to define the range and distribution of transport rates within and across particle sizes.

  9. Distribution of seed plants with respect to tide levels and water salinity in the natural tidal marshes of the northern San Francisco Bay Estuary, California

    Science.gov (United States)

    Atwater, Brian F.; Hedel, Charles W.

    1976-01-01

    Shoaling of subtidal and intertidal mud flats has permitted tidal marshes to spread across large marginal areas of the San Francisco Bay estuary during the past several thousand years. By 1850 A.D. the tidal marshes of the estuary, including those of the Sacramento - San Joaquin Delta, covered an area nearly twice as large as the area of open water. Nearly 95 percent of these marshes have been diked or filled during the past 125 years. Species distributions along leveled transects at six tidal marshes indicate that elevation and water salinity are the principal ecological factors that-control the distribution of seed plants in the remaining natural tidal marshes of the northern San Francisco Bay estuary. Marsh surfaces situated near mean tide level are populated by robust monocotyledons (e.g., Spartina foliosa, Scirpus californicus), whereas surfaces situated near high-tide levels support dicotyledons and a few small monocotyledonous species (e.g., Salicornia virginica, Distichlis spicata). Marshes near the seaward end of the estuary are typically occupied by 10-15 salt-tolerant species (e.g., Spartina foliosa, Salicornia virginica), whereas marshes at the riverward end of the estuary are inhabited by as many as 30 species, most of which are known to tolerate moderate or small amounts of salt (e.g., Scirpus spp., Phragmites communis, Typha latifolia).

  10. An assessment of scientific and technical aspects of closed investigations of canine forensics DNA – case series from the University of California, Davis, USA

    OpenAIRE

    Scharnhorst, Günther; Kanthaswamy, Sree

    2011-01-01

    Aim To describe and assess the scientific and technical aspects of animal forensic testing at the University of California, Davis. The findings and recommendations contained in this report are designed to assess the past, evaluate the present, and recommend reforms that will assist the animal forensic science community in providing the best possible services that comply with court standards and bear judicial scrutiny. Methods A batch of 32 closed files of domestic dog ...

  11. Seasonal and annual dynamics of harmful algae and algal toxins revealed through weekly monitoring at two coastal ocean sites off southern California, USA

    KAUST Repository

    Seubert, Erica L.

    2013-01-04

    Reports of toxic harmful algal blooms (HABs) attributed to the diatom Pseudo-nitzschia spp. have been increasing in California during the last several decades. Whether this increase can be attributed to enhanced awareness and monitoring or to a dramatic upswing in the development of HAB events remains unresolved. Given these uncertainties, the ability to accurately and rapidly identify an emerging HAB event is of high importance. Monitoring of HAB species and other pertinent chemical/physical parameters at two piers in southern California, Newport and Redondo Beach, was used to investigate the development of a site-specific bloom definition for identifying emerging domoic acid (DA) events. Emphasis was given to abundances of the Pseudo-nitzschia seriata size category of Pseudo-nitzschia due to the prevalence of this size class in the region. P. seriata bloom thresholds were established for each location based on deviations from their respective long-term mean abundances, allowing the identification of major and minor blooms. Sixty-five percent of blooms identified at Newport Beach coincided with measurable DA concentrations, while 36 % of blooms at Redondo Beach coincided with measurable DA. Bloom definitions allowed for increased specificity in multiple regression analysis of environmental forcing factors significant to the presence of DA and P. seriata. The strongest relationship identified was between P. seriata abundances 2 weeks following upwelling events at Newport Beach. © 2012 Springer-Verlag Berlin Heidelberg.

  12. Southern Monterey Bay Littoral Cell CRSMP Proposed Receiver Site 2008

    Data.gov (United States)

    California Department of Resources — Given the location of the critical areas of erosion and the need to avoid adverse impacts to local sensitive habitat, the Southern Monterey Bay Coastal RSM Plan...

  13. Southern Monterey Bay Littoral Cell CRSMP Sensitive Habitat 2008

    Data.gov (United States)

    California Department of Resources — One of the most important functions of the southern Monterey Bay coastal system is its role as a habitat for a unique flora and fauna. The beaches are habitat for...

  14. Eureka Littoral Cell CRSMP Humboldt Bay Shoreline Types 2011

    Data.gov (United States)

    California Department of Resources — In 2011 Aldaron Laird walked and kayaked the entire shoreline of Humboldt Bay mapping the shoreline conditions onto 11x17 laminated fieldmaps at a scale of 1' =...

  15. Joint environmental assessment for Chevron USA, Inc. and Santa Fe Energy Resources, Inc.: Midway Valley 3D seismic project, Kern County, California

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1996-10-01

    The proposed Midway Valley 3D Geophysical Exploration Project covers approximately 31,444 aces of private lands, 6,880 acres of Department of Energy (DOE) Lands within Naval Petroleum Reserve 2 (NPR2) and 3,840 acres of lands administered by the Bureau of Land Management (BLM), in western Kern County, California. This environmental assessment (EA) presents an overview of the affected environment within the project area using results of a literature review of biological field surveys previously conducted within or adjacent to a proposed 3D seismic project. The purpose is to provide background information to identify potential and known locations of sensitive wildlife and special status plant species within the proposed seismic project area. Biological field surveys, following agency approved survey protocols, will be conducted during October through November 1996 to acquire current resources data to provide avoidance as the project is being implemented in the field.

  16. Joint environmental assessment for Chevron USA, Inc. and Santa Fe Energy Resources, Inc.: Midway Valley 3D seismic project, Kern County, California

    International Nuclear Information System (INIS)

    The proposed Midway Valley 3D Geophysical Exploration Project covers approximately 31,444 aces of private lands, 6,880 acres of Department of Energy (DOE) Lands within Naval Petroleum Reserve 2 (NPR2) and 3,840 acres of lands administered by the Bureau of Land Management (BLM), in western Kern County, California. This environmental assessment (EA) presents an overview of the affected environment within the project area using results of a literature review of biological field surveys previously conducted within or adjacent to a proposed 3D seismic project. The purpose is to provide background information to identify potential and known locations of sensitive wildlife and special status plant species within the proposed seismic project area. Biological field surveys, following agency approved survey protocols, will be conducted during October through November 1996 to acquire current resources data to provide avoidance as the project is being implemented in the field

  17. A millennial-scale record of Pb and Hg contamination in peatlands of the Sacramento-San Joaquin Delta of California, USA

    Science.gov (United States)

    Drexler, Judith; Alpers, Charles N.; Neymark, Leonid; Paces, James B.; Taylor, Howard E.; Fuller, Christopher C.

    2016-01-01

    In this paper, we provide the first record of millennial patterns of Pb and Hg concentrations on the west coast of the United States. Peat cores were collected from two micro-tidal marshes in the Sacramento-San Joaquin Delta of California. Core samples were analyzed for Pb, Hg, and Ti concentrations and dated using radiocarbon, 210Pb, and 137Cs. Pre-anthropogenic concentrations of Pb and Hg in peat ranged from 0.60 to 13.0 µg g-1and from 6.9 to 71 ng g-1, respectively. For much of the past 6000+ years, the Delta was free from anthropogenic pollution, however, beginning in ~1425 CE, Hg and Pb concentrations, Pb/Ti ratios, Pb enrichment factors (EFs), and HgEFs all increased. Pb isotope compositions of the peat suggest that this uptick was likely caused by smelting activities originating in Asia. The next increases in Pb and Hg contamination occurred during the California Gold Rush (beginning ~1850 CE), when concentrations reached their highest levels (74 µg g-1 Pb, 990 ng g-1 Hg; PbEF = 12 and HgEF = 28). Lead concentrations increased again beginning in the ~1920s with the incorporation of Pb additives in gasoline. The phase-out of lead additives in the late 1980s was reflected in Pb isotope ratios and reductions in Pb concentrations in the surface layers of the peat. The rise and fall of Hg contamination was also tracked by the peat archive, with the highest Hg concentrations occurring just before 1963 CE and then decreasing during the post-1963 period. Overall, the results show that the Delta was a pristine region for most of its ~6700-year existence; however, since ~1425 CE, it has received Pb and Hg contamination from both global and regional sources.

  18. An assessment of scientific and technical aspects of closed investigations of canine forensics DNA – case series from the University of California, Davis, USA

    Science.gov (United States)

    Scharnhorst, Günther; Kanthaswamy, Sree

    2011-01-01

    Aim To describe and assess the scientific and technical aspects of animal forensic testing at the University of California, Davis. The findings and recommendations contained in this report are designed to assess the past, evaluate the present, and recommend reforms that will assist the animal forensic science community in providing the best possible services that comply with court standards and bear judicial scrutiny. Methods A batch of 32 closed files of domestic dog DNA cases processed at the University of California, Davis, between August 2003 and July 2005 were reviewed in this study. The case files comprised copies of all original paperwork, copies of the cover letter or final report, laboratory notes, notes on analyses, submission forms, internal chains of custody, printed images and photocopies of evidence, as well as the administrative and technical reviews of those cases. Results While the fundamental aspects of animal DNA testing may be reliable and acceptable, the scientific basis for forensic testing animal DNA needs to be improved substantially. In addition to a lack of standardized and validated genetic testing protocols, improvements are needed in a wide range of topics including quality assurance and quality control measures, sample handling, evidence testing, statistical analysis, and reporting. Conclusion This review implies that although a standardized panel of short tandem repeat and mitochondrial DNA markers and publicly accessible genetic databases for canine forensic DNA analysis are already available, the persistent lack of supporting resources, including standardized quality assurance and quality control programs, still plagues the animal forensic community. This report focuses on closed cases from the period 2003-2005, but extends its scope more widely to include other animal DNA forensic testing services. PMID:21674824

  19. Evaluating the potential effects of hurricanes on long-term sediment accumulation in two micro-tidal sub-estuaries: Barnegat Bay and Little Egg Harbor, New Jersey, U.S.A.

    Science.gov (United States)

    Marot, Marci E.; Smith, Christopher G.; Ellis, Alisha M.; Wheaton, Cathryn J.

    2016-01-01

    Barnegat Bay, located along the eastern shore of New Jersey, was significantly impacted by Hurricane Sandy in October 2012. Scientists from the U.S. Geological Survey (USGS) developed a multidisciplinary study of sediment transport and hydrodynamics to understand the mechanisms that govern estuarine and wetland responses to storm forcing. This report details the physical and chemical characteristics of surficial and downcore sediments from two areas within the bay. Eleven sites were sampled in both the central portion of the bay near Barnegat Inlet and in the southern portion of the bay in Little Egg Harbor. Laboratory analyses include Be-7, Pb-210, bulk density, porosity, x-radiographs, and grain-size distribution. These data will serve as a critical baseline dataset for understanding the current sedimentological regime and can be applied to future storms for understanding estuarine and wetland evolution.

  20. The monterey bay broadband ocean bottom seismic observatory

    Directory of Open Access Journals (Sweden)

    R. Uhrhammer

    2006-06-01

    Full Text Available We report on the installation of a long-term buried ocean-floor broadband seismic station (MOBB in Monterey Bay, California (USA, 40km off-shore, at a water depth of 1000 m. The station was installed in April 2002 using a ship and ROV, in a collaborative effort between the Monterey Bay Aquarium Research Institute (MBARI and the Berkeley Seismological Laboratory (BSL. The station is located on the western side of the San Gregorio Fault, a major fault in the San Andreas plate boundary fault system. In addition to a 3-component CMG-1T seismometer package, the station comprises a current meter and Differential Pressure Gauge, both sampled at high-enough frequency (1 Hz to allow the study of relations between background noise on the seismometers and ocean waves and currents. The proximity of several land-based broadband seismic stations of the Berkeley Digital Seismic Network allows insightful comparisons of land/ocean background seismic noise at periods relevant to regional and teleseismic studies. The station is currently autonomous. Recording and battery packages are exchanged every 3 months during scheduled one day dives. Ultimately, this station will be linked to shore using continuous telemetry (cable and/or buoy and will contribute to the earthquake notification system in Northern California. We present examples of earthquake and noise data recorded during the first 6 months of operation of MOBB. Lessons learned from these and continued recordings will help understand the nature and character of background noise in regional off-shore environments and provide a reference for the installation of future off-shore temporary and permanent broadband seismic stations.

  1. Box Model of a Series of Salt Ponds, as Applied to the Alviso Salt Pond Complex, South San Francisco Bay, California

    Science.gov (United States)

    Lionberger, Megan A.; Schoellhamer, David H.; Shellenbarger, Gregory; Orlando, James L.; Ganju, Neil K.

    2007-01-01

    This report documents the development and application of a box model to simulate water level, salinity, and temperature of the Alviso Salt Pond Complex in South San Francisco Bay. These ponds were purchased for restoration in 2003 and currently are managed by the U.S. Fish and Wildlife Service to maintain existing wildlife habitat and prevent a build up of salt during the development of a long-term restoration plan. The model was developed for the purpose of aiding pond managers during the current interim management period to achieve these goals. A previously developed box model of a salt pond, SPOOM, which calculates daily pond volume and salinity, was reconfigured to simulate multiple connected ponds and a temperature subroutine was added. The updated model simulates rainfall, evaporation, water flowing between the ponds and the adjacent tidal slough network, and water flowing from one pond to the next by gravity and pumps. Theoretical and measured relations between discharge and corresponding differences in water level are used to simulate most flows between ponds and between ponds and sloughs. The principle of conservation of mass is used to calculate daily pond volume and salinity. The model configuration includes management actions specified in the Interim Stewardship Plan for the ponds. The temperature subroutine calculates hourly net heat transfer to or from a pond resulting in a rise or drop in pond temperature and daily average, minimum, and maximum pond temperatures are recorded. Simulated temperature was compared with hourly measured data from pond 3 of the Napa?Sonoma Salt Pond Complex and monthly measured data from pond A14 of the Alviso Salt-Pond Complex. Comparison showed good agreement of measured and simulated pond temperature on the daily and monthly time scales.

  2. Regional Sampling of Mantle Peridotites in Serpentinite Blocks Collected from Serpentinite Bodies in the San Francisco Bay Area, California: Petrological Trends

    Science.gov (United States)

    Lewis, M.; Kirby, S. H.

    2015-12-01

    We have collected and investigated 278 ultramafic and related rock samples from 18 polygonal-block -and- sheared-matrix-type serpentinite bodies in the Coast Ranges in the San Francisco Bay Area. These sites include Ring Mountain in the north to Silver Creek near San Jose in the south, spanning nearly 100 km of Coast Range geology. These bodies show extensive variation in volume ratios of serpentinite blocks (some including peridotite minerals) to sheared matrix, in peridotite mineral modes, in the degrees of weathering, in the proportions of peridotite minerals versus alteration minerals, and in the degree of late-stage brittle deformation. However, we found remarkable coherence in the serpentinite alteration mineralogy and our samples bear a strong resemblance to those in the Redwood City serpentinite body studied recently by Uno and Kirby (GRL submitted). In particular, we see mineralogical and geochemical evidence for multiple stages of alteration of the original peridotite minerals that reflect partial peridotite alteration, likely in the mantle, and then a later reaction to lizardite + magnetite in the crust. These reactions are followed by localized late-stage partial alteration of serpentinite to silica minerals and magnesite by carbonated water. Our findings suggest that the mantle sources of this type of partially-serpentinized peridotite in this section of the Coast Ranges are remarkably similar and that the processes leading to later-stage alteration reactions have operated repeatedly over the area that we sampled. Internal deformation in these bodies during later stages of alteration probably occurred during ascent through the crust, as reflected by sheared lizardite skins on the serpentinite blocks that we collected. We put forward several working hypotheses that provide insights into the origins and geologic histories of these rocks.

  3. Pycnogonids associated with the giant lion´s-paw scallop Nodipecten subnodosus (Sowerby) in Ojo de Liebre Bay, Guerrero Negro, Baja California Sur, Mexico.

    Science.gov (United States)

    de León-Espinosa, Angel; de León-González, Jesus A

    2015-01-01

    Five species of epibenthic pycnogonids collected on the giant lion´s-paw scallop Nodipecten subnodosus are recorded. A new species of Eurycyde, Eurycyde bamberi, is described. Of the 19 species known in this genus; the new species is closest to Eurycyde hispida Kroyer, 1844 but differs from it in the absence of plumose spines and the shapes of the lateral process, first coxa, and ocular tubercle. The new species represents the third member of Eurycyde from the eastern Pacific in addition to Eurycyde spinosa Hilton, 1916 and Eurycyde clitellaria Stock, 1955. Besides Eurycyde bamberi, the following species were collected: Nymphopsis duodorsospinosa Hilton, 1942c; Callipallene californiensis (Hall, 1913); Nymphon lituus Child, 1979; and Pycnogonum rickettsi Schmitt, 1934. Pycnogonum rickettsi is recorded for first time from Mexican waters, as is Nymphon lituus from the western coast of Baja California Peninsula. Each of these four species are re-described and re-illustrated in order to fill in existing gaps in the literature of the region. PMID:26692802

  4. The Social Media Strategy for Bay Area Green Tours

    OpenAIRE

    Silander, Jenna

    2013-01-01

    This thesis features a non-profit organization called Bay Area Green Tours (BAGT). They offer private educational tours all over the Bay Area in California. The tours showcase projects and entities that are creating a greener environment and sustainable future. The purpose of this study was to demonstrate to Bay Area Green Tours the benefits of developing an efficient social media strategy as part of their online marketing. BAGT has an active online presence including social media, but t...

  5. Long-term post-fire effects on spatial ecology and reproductive output of female Agassiz’s desert tortoises (Gopherus agassizii) at a wind energy facility near Palm Springs, California, USA

    Science.gov (United States)

    Lovich, Jeffrey E.; Ennen, Joshua R.; Madrak, Sheila V.; Loughran, Caleb L.; Meyer, Katherin P.; Arundel, Terence R.; Bjurlin, Curtis D.

    2011-01-01

    We studied the long-term response of a cohort of eight female Agassiz’s desert tortoises (Gopherus agassizii) during the first 15 years following a large fire at a wind energy generation facility near Palm Springs, California, USA. The fire burned a significant portion of the study site in 1995. Tortoise activity areas were mapped using minimum convex polygons for a proximate post-fire interval from 1997 to 2000, and a long-term post-fire interval from 2009 to 2010. In addition, we measured the annual reproductive output of eggs each year and monitored the body condition of tortoises over time. One adult female tortoise was killed by the fire and five tortoises bore exposure scars that were not fatal. Despite predictions that tortoises would make the short-distance movements from burned to nearby unburned habitats, most activity areas and their centroids remained in burned areas for the duration of the study. The percentage of activity area burned did not differ significantly between the two monitoring periods. Annual reproductive output and measures of body condition remained statistically similar throughout the monitoring period. Despite changes in plant composition, conditions at this site appeared to be suitable for survival of tortoises following a major fire. High productivity at the site may have buffered tortoises from the adverse impacts of fire if they were not killed outright. Tortoise populations at less productive desert sites may not have adequate resources to sustain normal activity areas, reproductive output, and body conditions following fire.

  6. Polybrominated diphenyl ethers (PBDE) and polychlorinated dibenzo-P-dioxins (PCDD/F) and biphenyls (PCB) in fish, beef, and fowl purchased in food markets in Northern California USA

    Energy Technology Data Exchange (ETDEWEB)

    Luksemburg, W.; Maier, M.; Patterson, A. [Alta Analytical Laboratory, El Dorado Hills, CA (United States); Wenning, R.; Braithwaite, S. [ENVIRON International, Emeryville, CA (United States)

    2004-09-15

    Food basket surveys and exposure studies conducted over the past decade suggest that one of the main routes of human exposure to polychlorinated dibenzo-p-dioxins and furans (PCDD/Fs) and biphenyls (PCBs) is likely through the consumption of food products such as eggs, meats, fish, and dairy products. More recently, studies of human milk, blood, and adipose tissues also demonstrate human exposure to polybrominated diphenyl ethers (PBDEs). The contamination of Belgium store-bought chicken products in 1999 and, more recently, concerns regarding farmraised fish products in the U.S., Ireland, and elsewhere by PCDD/Fs and PCBs has heightened concerns about the occurrence of other persistent organic pollutants (POPs), including PBDEs, in consumer food products. In the U.S., for example, recent studies have shown the edible portions of farm-raised fish containing higher levels of PCDD/Fs, PCBs, and PBDEs than in wild fish. In this study, fillets from several species of freshwater and ocean fish (both farm-raised and wild), as well as ground beef, ground deer, and meat from several species of fowl (chicken, turkey, duck, goose, and pheasant), were purchased from food markets in the cities of Sacramento and El Dorado Hills, California USA. Foods were tested for PCDD/Fs, PCBs, and PBDEs and the results used to evaluate human exposure through the consumption of store-bought consumer food products.

  7. A cold phase of the East Pacific triggers new phytoplankton blooms in San Francisco Bay

    Science.gov (United States)

    Cloern, J.E.; Jassby, A.D.; Thompson, J.K.; Hieb, K.A.

    2007-01-01

    Ecological observations sustained over decades often reveal abrupt changes in biological communities that signal altered ecosystem states. We report a large shift in the biological communities of San Francisco Bay, first detected as increasing phytoplankton biomass and occurrences of new seasonal blooms that began in 1999. This phytoplankton increase is paradoxical because it occurred in an era of decreasing wastewater nutrient inputs and reduced nitrogen and phosphorus concentrations, contrary to the guiding paradigm that algal biomass in estuaries increases in proportion to nutrient inputs from their watersheds. Coincidental changes included sharp declines in the abundance of bivalve mollusks, the key phytoplankton consumers in this estuary, and record high abundances of several bivalve predators: Bay shrimp, English sole, and Dungeness crab. The phytoplankton increase is consistent with a trophic cascade resulting from heightened predation on bivalves and suppression of their filtration control on phytoplankton growth. These community changes in San Francisco Bay across three trophic levels followed a state change in the California Current System characterized by increased upwelling intensity, amplified primary production, and strengthened southerly flows. These diagnostic features of the East Pacific "cold phase" lead to strong recruitment and immigration of juvenile flatfish and crustaceans into estuaries where they feed and develop. This study, built from three decades of observation, reveals a previously unrecognized mechanism of ocean-estuary connectivity. Interdecadal oceanic regime changes can propagate into estuaries, altering their community structure and efficiency of transforming land-derived nutrients into algal biomass. ?? 2007 by The National Academy of Sciences of the USA.

  8. Debris in the deep: Using a 22-year video annotation database to survey marine litter in Monterey Canyon, central California, USA

    Science.gov (United States)

    Schlining, Kyra; von Thun, Susan; Kuhnz, Linda; Schlining, Brian; Lundsten, Lonny; Jacobsen Stout, Nancy; Chaney, Lori; Connor, Judith

    2013-09-01

    Anthropogenic marine debris is an increasing concern because of its potential negative impacts on marine ecosystems. This is a global problem that will have lasting effects for many reasons, including: (1) the input of debris into marine environments is likely to continue (commensurate with population increase and globalization), (2) accumulation, and possibly retention, of debris will occur in specific areas due to hydrography and geomorphology, and (3) the most common types of debris observed to date will likely persist for centuries. Due to the technical challenges and prohibitive costs of conducting research in the deep sea, little is known about the abundance, types, sources, and impacts of human refuse on this vast habitat, and the extreme depths to which this debris is penetrating has only recently been exposed. We reviewed 1149 video records of marine debris from 22 years of remotely operated vehicle deployments in Monterey Bay, covering depths from 25 m to 3971 m. We characterize debris by type, examine patterns of distribution, and discuss potential sources and dispersal mechanisms. Debris was most abundant within Monterey Canyon where aggregation and downslope transport of debris from the continental shelf are enhanced by natural canyon dynamics. The majority of debris was plastic (33%) and metal (23%). The highest relative frequencies of plastic and metal observations occurred below 2000 m, indicating that previous studies may greatly underestimate the extent of anthropogenic marine debris on the seafloor due to limitations in observing deeper regions. Our findings provide evidence that submarine canyons function to collect debris and act as conduits for debris transport from coastal to deep-sea habitats.

  9. Coastal tectonics on the eastern margin of the Pacific Rim: Late Quaternary sea-level history and uplift rates, Channel Islands National Park, California, USA

    Science.gov (United States)

    Muhs, Daniel R.; Simmons, Kathleen R.; Schumann, R. Randall; Groves, Lindsey T.; DeVogel, Stephen B.; Minor, Scott A.; Laurel, Deanna

    2014-01-01

    The Pacific Rim is a region where tectonic processes play a significant role in coastal landscape evolution. Coastal California, on the eastern margin of the Pacific Rm, is very active tectonically and geomorphic expressions of this include uplifted marine terraces. There have been, however, conflicting estimates of the rate of late Quaternary uplift of marine terraces in coastal California, particularly for the orthern Channel Islands. In the present study, the terraces on San Miguel Island and Santa Rosa Island were mapped and new age estimates were generated using uranium-series dating of fossil corals and amino acid geochronology of fossil mollusks. Results indicate that the 2nd terrace on both islands is ~120 ka and the 1st terrace on Santa Rosa Island is ~80 ka. These ages correspond to two global high-sea stands of the Last Interglacial complex, marine isotope stages (MIS) 5.5 and 51, respectively. The age estimates indicate that San Miguel Island and Santa Rosa Island have been tectonically uplifted at rates of 0.12e0.20 m/ka in the late Quaternary, similar to uplift rates inferred from previous studies on neighboring San Cruz Island. The newly estimated uplift rates for the northern Channel Islands are, however, an order of magnitude lower than a recent study that generated uplift rates from an offshore terrace dating to the Last Glacial period. The differences between the estimated uplift rates in the present study and the offshore study are explained by the magnitude of glacial isostatic adjustment (GIA) effects that were not known at the time of the earlier study. Set in the larger context of northeastern Pacific Rim tectonics, Channel Islands uplift rates are higher than those coastal localities on the margin of the East Pacific Rise spreading center, but slightly lower than those of most localities adjacent to the Cascadia subduction zone. The uplift rates reported here for the northern Channel Islands are similar to those reported for most other

  10. Concentrations of Trace Elements in Settling Particulate Matter and Particulate Element Fluxes in the Concepción Bay, the Gulf of California during the years 1996-1998

    Science.gov (United States)

    Leal Acosta, M. L.; Choumiline, E.; Silverberg, N.

    2009-12-01

    María Luisa Leal Acosta, Evgueni Choumiline y Norman Silverberg National Polytechnic Institute, Interdisciplinary Center of Marine Sciences Av. Instituto Politécnico Nacional s/n Col. Palo de Santa Rita Apdo. Postal 592 23096 La Paz, B.C.S., México. The Concepcion Bay on the Peninsula de Baja California outstands by its high biological productivity and shallow gas-hydrothermal discharges. During a summer season the anoxic and hypoxic conditions frequently appear in the water column. To know the biogeochemistry of elements in this bay, a preliminary study of the composition of settling particulate matter (SPM) was carried out. The samples were collected since May 22, 1996 to January 30, 1997 (first period with low fluxes) and during January 31, 1997 - March 22, 1998 (second period with high fluxes) using a trap, anchored at south of the bay. The major element (Fe and Ca) and 21 trace element contents in SPM were determined by instrumental neutron activation analysis. The average lithogenic contribution in the particulate calculated using Sc is terrigenous indicator 39% and 19% for the first and second period respectively. The As, Br, Cr, Sb, Se, Sr y U average concentrations in the SPM were higher than their average crustal abundances. The principal component analysis shows the existents of three associations of the elements in settling particles: a) lithogenic (As, Co, Cr, Fe, lantanides and Sc); b) biogenic (Sr and Ca); c) authigenic (U and Se). The average element enrichment factors were higher in the first period of SPM sampling from: Se (739)> Zn (523)> Cr(105)> Br(104)> Sb(97)> As (69). The normalization of the rare earth elements contents in SPM with North American Shale Composite allowed to establish the negative europium anomaly in 1996 samples, and second period was characterized by positive europium anomaly, also detected for the sediments beneath the trap. Average fluxes of particulate elements during this period correspond to a following sequence: Fe

  11. Observations of plan-view sand ripple behavior and spectral wave climate on the inner shelf of San Pedro Bay, California

    Science.gov (United States)

    Xu, J. P.

    2005-01-01

    Concurrent video images of sand ripples and current meter measurements of directional wave spectra are analyzed to study the relations between waves and wave-generated sand ripples. The data were collected on the inner shelf off Huntington Beach, California, at 15 m water depth, where the sea floor is comprised of well-sorted very fine sands (D50=92 ??m), during the winter of 2002. The wave climate, which was controlled by southerly swells (12-18 s period) and westerly wind waves (5-10 s period), included three wave types: (A) uni-modal, swells only; (B) bi-modal, swells dominant; and (C) bi-modal, wind-wave dominant. Each wave type has distinct relations with the plan-view shapes of ripples that are classified into five types: (1) sharp-crested, two-dimensional (2-D) ripples; (2) sharp-crested, brick-pattern, 3-D ripples; (3) bifurcated, 3-D ripples; (4) round-crested, shallow, 3-D ripples; and (5) flat bed. The ripple spacing is very small and varies between 4.5 and 7.5 cm. These ripples are anorbital as ripples in many field studies. Ripple orientation is only correlated with wave directions during strong storms (wave type C). In a poly-modal, multi-directional spectral wave environment, the use of the peak parameters (frequency, direction), a common practice when spectral wave measurements are unavailable, may lead to significant errors in boundary layer and sediment transport calculations. ?? 2004 Elsevier Ltd. All rights reserved.

  12. Late Quaternary sea-level history and the antiquity of mammoths (Mammuthus exilis and Mammuthus columbi), Channel Islands National Park, California, USA

    Science.gov (United States)

    Muhs, Daniel R.; Simmons, Kathleen R.; Groves, Lindsey T.; McGeehin, John P.; Randall Schumann, R.; Agenbroad, Larry D.

    2015-05-01

    Fossils of Columbian mammoths (Mammuthus columbi) and pygmy mammoths (Mammuthus exilis) have been reported from Channel Islands National Park, California. Most date to the last glacial period (Marine Isotope Stage [MIS] 2), but a tusk of M. exilis (or immature M. columbi) was found in the lowest marine terrace of Santa Rosa Island. Uranium-series dating of corals yielded ages from 83.8 ± 0.6 ka to 78.6 ± 0.5 ka, correlating the terrace with MIS 5.1, a time of relatively high sea level. Mammoths likely immigrated to the islands by swimming during the glacial periods MIS 6 (~ 150 ka) or MIS 8 (~ 250 ka), when sea level was low and the island-mainland distance was minimal, as during MIS 2. Earliest mammoth immigration to the islands likely occurred late enough in the Quaternary that uplift of the islands and the mainland decreased the swimming distance to a range that could be accomplished by mammoths. Results challenge the hypothesis that climate change, vegetation change, and decreased land area from sea-level rise were the causes of mammoth extinction at the Pleistocene/Holocene boundary on the Channel Islands. Pre-MIS 2 mammoth populations would have experienced similar or even more dramatic changes at the MIS 6/5.5 transition.

  13. Oral papillomatosis caused by Enhydra lutris papillomavirus 1 (ElPV-1) in southern sea otters (Enhydra lutris nereis) in California, USA.

    Science.gov (United States)

    Ng, Terry Fei Fan; Miller, Melissa A; Kondov, Nikola O; Dodd, Erin M; Batac, Francesca; Manzer, Mike; Ives, Sarah; Saliki, Jeremiah T; Deng, Xutao; Delwart, Eric

    2015-04-01

    The southern sea otter (Enhydra lutris nereis) is a threatened marine sentinel. During postmortem investigations of stranded sea otters from 2004 to 2013 in California, US, papillomas were detected in the oral cavity of at least seven otters via necropsy and histopathology. Next-generation sequencing of viral particles purified from a single papilloma revealed a novel papillomavirus, Enhydra lutris papillomavirus 1 (ElPV-1). The genome of ElPV-1 was obtained, representing the first fully sequenced viral genome from southern sea otters. Phylogenetic analysis of the entire L1 gene, as well as a concatenated protein identities plot of all papillomaviral genes revealed that ElPV-1 is a λ-papillomavirus, related to a raccoon papillomavirus (Procyon lotor papillomavirus type 1) and a canine oral papillomavirus. Immunohistochemical staining, using a cross-reactive bovine papillomavirus antibody, suggested that ElPV-1 is present in intranuclear inclusions and intracytoplasmic keratin granules. Virus-infected cells were scattered throughout the stratum granulosum and stratum spinosum of the gingival and buccal papillomas. Using ElPV-1-specific PCR, we confirmed viral DNA in oral papillomas from all seven stranded sea otters, with identical L1 sequences. This virus is associated with the development of oral papillomatosis in southern sea otters. PMID:25647597

  14. Monitoring the hydrologic system for potential effects of geothermal and ground-water development in the Long Valley Caldera, Mono County, California, USA

    International Nuclear Information System (INIS)

    In the early 1980's, renewed interest in the geothermal potential of the Long valley caldera, California, highlighted the need to balance the benefits of energy development with the established recreational activities of the area. The Long Valley Hydrologic Advisory Committee, formed in 1987, instituted a monitoring program to collect data during the early stages of resource utilization to evaluate potential effects on the hydrologic system. This paper reports that early data show declines in streamflow, spring flow, and ground-water levels caused by 6 years of below-average precipitation. Springs in the Hot Creek State Fish Hatchery area discharge water that is a mixture of nonthermal and hydrothermal components. Possible sources of nonthermal water have been identified by comparing deuterium concentrations in streams and springs. The equivalent amount of undiluted thermal water discharged from the springs was calculated on the basis of boron and chloride concentrations. Quantifying the thermal and nonthermal fractions of the total flow may allow researchers to assess changes in flow volume or temperature of the springs caused by ground-water or geothermal development

  15. Mercury methylation, export and bioaccumulation in rice agriculture - model results from comparative and experimental studies in 3 regions of the California Delta, USA

    Science.gov (United States)

    Windham-Myers, L.; Fleck, J.; Eagles-Smith, C.; Ackerman, J.

    2013-12-01

    Seasonally flooded wetland ecosystems are often poised for mercury (Hg) methylation, thus becoming sources of methylmercury (MeHg) to in situ and downstream biota. The seasonal flooding associated with cultivation of rice (Oryza sativa) also generates MeHg, which may be stored in sediment or plants, bioaccumulated into fauna, degraded or exported, depending on hydrologic and seasonal conditions. While many U.S. waters are regulated for total Hg concentrations based on fish targets, California's Sacramento-San Joaquin Delta (Delta) will soon implement the first MeHg total maximum daily load (TMDL) control program. Since 2007, a conceptual model (DRERIP-MCM) and several ecosystem-level studies have been advanced to better understand the mechanisms behind Hg methylation, export and bioaccumulation within Delta wetlands, including rice agriculture. Three Delta rice-growing regions (Yolo Bypass, Cosumnes River, Central Delta) of varied soil characteristics, mining influences and hydrology, were monitored over full crop years to evaluate annual MeHg dynamics. In addition to fish tissue Hg accumulation, a broad suite of biogeochemical and hydrologic indices were assessed and compared between wetland types, seasons, and regions. In general, Delta rice fields were found to export MeHg during the post-harvest winter season, and promote MeHg uptake in fish and rice grain during the summer growing season. As described in a companion presentation (Eagles-Smith et al., this session), the experimental Cosumnes River study suggests that rice-derived dissolved organic carbon (DOC) fuels MeHg production and uptake into aquatic foodwebs. Explicit DRERIP-MCM linkages for the role of rice-DOC in MeHg production, export and bioaccumulation were verified across two summers (2011, 2012): rice biomass and root productivity influenced porewater DOC availability and microbial processes, which drove sediment MeHg production and flux to surface water, promoting MeHg bioaccumulation in fish

  16. Diurnal variability in riverine dissolved organic matter composition determined by in situ optical measurement in the San Joaquin River (California, USA)

    Science.gov (United States)

    Spencer, R.G.M.; Pellerin, B.A.; Bergamaschi, B.A.; Downing, B.D.; Kraus, T.E.C.; Smart, D.R.; Dahlgren, R.A.; Hernes, P.J.

    2007-01-01

    Dissolved organic matter (DOM) concentration and composition in riverine and stream systems are known to vary with hydrological and productivity cycles over the annual and interannual time scales. Rivers are commonly perceived as homogeneous with respect to DOM concentration and composition, particularly under steady flow conditions over short time periods. However, few studies have evaluated the impact of short term variability (<1 day) on DOM dynamics. This study examined whether diurnal processes measurably altered DOM concentration and composition in the hypereutrophic San Joaquin River (California) during a relatively quiescent period. We evaluated the efficacy of using optical in situ measurements to reveal changes in DOM which may not be evident from bulk dissolved organic carbon (DOC) measurement alone. The in situ optical measurements described in this study clearly showed for the first time diurnal variations in DOM measurements, which have previously been related to both composition and concentration, even though diurnal changes were not well reflected in bulk DOC concentrations. An apparent asynchronous trend of DOM absorbance and chlorophyll-a in comparison to chromophoric dissolved organic matter (CDOM) fluorescence and spectral slope S290-350 suggests that no one specific CDOM spectrophotometric measurement explains absolutely DOM diurnal variation in this system; the measurement of multiple optical parameters is therefore recommended. The observed diurnal changes in DOM composition, measured by in situ optical instrumentation likely reflect both photochemical and biologically-mediated processes. The results of this study highlight that short-term variability in DOM composition may complicate trends for studies aiming to distinguish different DOM sources in riverine systems and emphasizes the importance of sampling specific study sites to be compared at the same time of day. The utilization of in situ optical technology allows short-term variability

  17. Vertical stratification in the distribution of demersal fishes along the walls of the La Jolla and Scripps submarine canyons, California, USA

    Science.gov (United States)

    Smith, Joshua G.; Lindholm, James

    2016-08-01

    The geographic distributions of many coastal marine fish assemblages are strongly driven by habitat features, particularly among demersal fishes that live along the seafloor. Ecologists have long recognized the importance of characterizing fish habitat associations, especially where spatial management is under consideration. However, little is known about fish distributions and habitat suitability in unique demersal habitats such as submarine canyons. The active continental margin of the California coast is cut by eight submarine canyons, several of which extend from the shore to the deep abyssal plain. We sampled the demersal fish assemblages in two of those canyons: (1) the Scripps submarine canyon in the San-Diego-Scripps State Marine Conservation Area (SMCA) and (2) the La Jolla canyon in the Matlahuayl State Marine Reserve (SMR) to gain insight into both the distributions and habitat associations of demersal fishes in canyons. A remotely operated vehicle was used to conduct 21 vertically oriented transects along the canyon walls in depths ranging from 20 to 300 m. Species composition was assessed in three depth-stratified zones (100 m per zone) along the canyon walls. Species richness, abundance, and attributes of the surrounding canyon habitat structure (slope and benthic terrain ruggedness) were quantified. Three distinct assemblage groupings were identified, which comprised 35 species of demersal fishes from 17 families. Among all factors analyzed in this study, depth, slope, and ruggedness were strong explanatory variables of patterns of species richness and abundance; however, the relationship between depth and assemblage structure was non-linear. The greatest number of species was observed in the mid depth-stratified zone. These trends suggest that variation in canyon dynamics across depth strata may facilitate distinct assemblage groupings of demersal fishes, which can in turn be used to better manage these unique habitats.

  18. Fluid-controlled grain boundary migration and switch in slip systems in a high strain, high temperature contact aureole, California, USA

    Science.gov (United States)

    Morgan, Sven S.; Nabelek, Peter I.; Student, James; Sadorski, Joseph F.

    2016-04-01

    Within the highly strained aureole surrounding the Eureka Valley-Joshua Flat-Beer Creek (EJB) composite pluton of eastern California, an inversion in microstructures and crystallographic preferred orientations (CPOs) exists with distance from the contact. An inner aureole ( slip in quartz. Within the outer aureole (250 m to 1500 m from the contact), quartzites are interbedded with pelitic schist and are completely recrystallized and microstructures are indicative of extensive GBM. CPOs are indicative of prism [c] slip. Oxygen isotope ratios in the inner aureole are only slightly shifted from their original values. Oxygen isotopes from the outer aureole are shifted more, which is consistent with equilibration with locally derived fluids. We suggest that recrystallization in the outer aureole was aided by pore water, water derived from fluid inclusions, and water generated by prograde reactions in the schists. The pore fluids in the inner aureole were also probably initially water-rich. However, during prograde reactions in the intervening calc-silicate rocks, and perhaps more importantly, between calcite cement and quartz in the quartzites, the pore fluid composition in the inner aureole changed to become dominated by CO2, which acted as a non-wetting phase and decreased the fugacity of water slowing grain boundary mobility. Low water fugacity also suppressed the activity of prism [c] slip. Therefore, we propose that dry conditions or a grain boundary fluid with a significant non-wetting component (CO2) can result in apparent temperatures of deformation that are more than 100 °C lower than the real temperatures of deformation.

  19. Using SPARROW to Model Total Nitrogen Sources, and Transport in Rivers and Streams of California and Adjacent States, U.S.A

    Science.gov (United States)

    Saleh, D.; Domagalski, J. L.

    2012-12-01

    Sources and factors affecting the transport of total nitrogen are being evaluated for a study area that covers most of California and some areas in Oregon and Nevada, by using the SPARROW model (SPAtially Referenced Regression On Watershed attributes) developed by the U.S. Geological Survey. Mass loads of total nitrogen calculated for monitoring sites at stream gauging stations are regressed against land-use factors affecting nitrogen transport, including fertilizer use, recharge, atmospheric deposition, stream characteristics, and other factors to understand how total nitrogen is transported under average conditions. SPARROW models have been used successfully in other parts of the country to understand how nutrients are transported, and how management strategies can be formulated, such as with Total Maximum Daily Load (TMDL) assessments. Fertilizer use, atmospheric deposition, and climatic data were obtained for 2002, and loads for that year were calculated for monitored streams and point sources (mostly from wastewater treatment plants). The stream loads were calculated by using the adjusted maximum likelihood estimation method (AMLE). River discharge and nitrogen concentrations were de-trended in these calculations in order eliminate the effect of temporal changes on stream load. Effluent discharge information as well as total nitrogen concentrations from point sources were obtained from USEPA databases and from facility records. The model indicates that atmospheric deposition and fertilizer use account for a large percentage of the total nitrogen load in many of the larger watersheds throughout the study area. Point sources, on the other hand, are generally localized around large cities, are considered insignificant sources, and account for a small percentage of the total nitrogen loads throughout the study area.

  20. Spatial and temporal assessment of environmental contaminants in water, sediments and fish of the Salton Sea and its two primary tributaries, California, USA, from 2002 to 2012.

    Science.gov (United States)

    Xu, Elvis Genbo; Bui, Cindy; Lamerdin, Cassandra; Schlenk, Daniel

    2016-07-15

    The Salton Sea, the largest inland surface water body in California, has been designated as a sensitive ecological area by federal and state governments. Its two main tributaries, the New River and Alamo River are impacted by urban and agriculture land use wastes. The purpose of this study was to temporally and spatially evaluate the ecological risks of contaminants of concern in water, sediments and fish tissues. A total of 229 semivolatile organic compounds and 12 trace metals were examined. Among them Selenium, DDTs, PAHs, PCBs, chlorpyrifos and some current-use pesticides such as pyrethroids exceeded risk thresholds. From 2002 to 2012, measurements of chlorpyrifos in sediments generally declined and were not observed after 2009 at the river outlets. In contrast, pyrethroid concentrations in sediments rose consistently after 2009. In water samples, the outlets of the two rivers showed relatively higher levels of contamination than the main water body of the Salton Sea. However, sediments of the main water body of the Salton Sea showed relatively higher sediment concentrations of contaminants than the two rivers. This was particularly true for selenium which showed reductions in concentrations from 2002 to 2007, but then gradual increases to 2012. Consistent with water evaluations, contaminant concentrations in fish tissues tended to be higher at the New River boundary and at the drainage sites for the Alamo River compared to sites along each river. The persistent contaminants DDTs, PAHs, chlorpyrifos and several pyrethroid insecticides were associated with the toxicity of sediments and water collected from the rivers. Overall, assessment results suggested potential ecological risk in sediments of the Salton Sea as well as in water and fish from the two rivers. PMID:27058132

  1. THE HIGH COST OF MOTHERHOOD: END-LACTATION SYNDROME IN SOUTHERN SEA OTTERS (ENHYDRA LUTRIS NEREIS) ON THE CENTRAL CALIFORNIA COAST, USA.

    Science.gov (United States)

    Chinn, Sarah M; Miller, Melissa A; Tinker, M Tim; Staedler, Michelle M; Batac, Francesca I; Dodd, Erin M; Henkel, Laird A

    2016-04-28

    Sea otters ( Enhydra lutris ) have exceptionally high energetic requirements, which nearly double during lactation and pup care. Thus, females are extremely vulnerable to caloric insufficiency. Despite a number of compensatory strategies, the metabolic challenge of reproduction culminates in numerous maternal deaths annually. Massive depletion of energy reserves results in a case presentation that we define as end-lactation syndrome (ELS), characterized by moderate to severe emaciation not attributable to a concurrent, independent disease process in females dying during late pup care or postweaning. We compiled detailed data for 108 adult female southern sea otters ( Enhydra lutris nereis) examined postmortem that stranded in California, US, 2005-12, and assessed pathology, reproductive status, and the location and timing of stranding. We introduce simple, grossly apparent, standardized physical criteria to assess reproductive stage for female sea otters. We also describe ELS, examine associated risk factors, and highlight female life history strategies that likely optimize reproduction and survival. Our data suggest that females can reset both the timing and energetic demands of reproduction through fetal loss, pup abandonment, or early weaning as part of specific physiologic checkpoints during each reproductive cycle. Females appear to preload nutritionally during delayed implantation and gestation to increase fitness and reproductive success. We found that ELS was a major cause of death, affecting 56% of enrolled adult females. Peak ELS prevalence occurred in late spring, possibly reflecting the population trend toward fall/winter pupping. Increasing age and number of pregnancies were associated with a higher risk of ELS. Although the proportion of ELS females was highest in areas with dense sea otter populations, cases were recovered throughout the range, suggesting that death from ELS is associated with, but not solely caused by, population resource limitation

  2. Methylmercury production in and export from agricultural wetlands in California, USA: the need to account for physical transport processes into and out of the root zone

    Science.gov (United States)

    Bachand, Philip A.M.; Bachand, Sandra M.; Fleck, Jacob A.; Alpers, Charles N.; Stephenson, Mark; Windham-Myers, Lisamarie

    2014-01-01

    Concentration and mass balance analyses were used to quantify methylmercury (MeHg) loads from conventional (white) rice, wild rice, and fallowed fields in northern California's Yolo Bypass. These analyses were standardized against chloride to distinguish transport pathways and net ecosystem production (NEP). During summer, chloride loads were both exported with surface water and moved into the root zone at a 2:1 ratio. MeHg and dissolved organic carbon (DOC) behaved similarly with surface water and root zone exports at ~ 3:1 ratio. These trends reversed in winter with DOC, MeHg, and chloride moving from the root zone to surface waters at rates opposite and exceeding summertime root zone fluxes. These trends suggest that summer transpiration advectively moves constituents from surface water into the root zone, and winter diffusion, driven by concentration gradients, subsequently releases those constituents into surface waters. The results challenge a number of paradigms regarding MeHg. Specifically, biogeochemical conditions favoring microbial MeHg production do not necessarily translate to synchronous surface water exports; MeHg may be preserved in the soils allowing for release at a later time; and plants play a role in both biogeochemistry and transport. Our calculations show that NEP of MeHg occurred during both summer irrigation and winter flooding. Wild rice wet harvesting and winter flooding of white rice fields were specific practices that increased MeHg export, both presumably related to increased labile organic carbon and disturbance. Outflow management during these times could reduce MeHg exports. Standardizing MeHg outflow:inflow concentration ratios against natural tracers (e.g. chloride, EC) provides a simple tool to identify NEP periods. Summer MeHg exports averaged 0.2 to 1 μg m− 2 for the different agricultural wetland fields, depending upon flood duration. Average winter MeHg exports were estimated at 0.3 μg m− 2. These exports are

  3. Re-establishing marshes can return carbon sink functions to a current carbon source in the Sacramento-San Joaquin Delta of California, USA

    Science.gov (United States)

    Miller, Robin L.; Fujii, Roger

    2011-01-01

    The Sacramento-San Joaquin Delta in California was an historic, vast inland freshwater wetland, where organic soils almost 20 meters deep formed over the last several millennia as the land surface elevation of marshes kept pace with sea level rise. A system of levees and pumps were installed in the late 1800s and early 1900s to drain the land for agricultural use. Since then, land surface has subsided more than 7 meters below sea level in some areas as organic soils have been lost to aerobic decomposition. As land surface elevations decrease, costs for levee maintenance and repair increase, as do the risks of flooding. Wetland restoration can be a way to mitigate subsidence by re-creating the environment in which the organic soils developed. A preliminary study of the effect of hydrologic regime on carbon cycling conducted on Twitchell Island during the mid-1990s showed that continuous, shallow flooding allowing for the growth of emergent marsh vegetation re-created a wetland environment where carbon preservation occurred. Under these conditions annual plant biomass carbon inputs were high, and microbial decomposition was reduced. Based on this preliminary study, the U.S. Geological Survey re-established permanently flooded wetlands in fall 1997, with shallow water depths of 25 and 55 centimeters, to investigate the potential to reverse subsidence of delta islands by preserving and accumulating organic substrates over time. Ten years after flooding, elevation gains from organic matter accumulation in areas of emergent marsh vegetation ranged from almost 30 to 60 centimeters, with average annual carbon storage rates approximating 1 kg/m2, while areas without emergent vegetation cover showed no significant change in elevation. Differences in accretion rates within areas of emergent marsh vegetation appeared to result from temporal and spatial variability in hydrologic factors and decomposition rates in the wetlands rather than variability in primary production

  4. Comparison of particle-tracking and lumped-parameter models for determining groundwater age distributions and nitrate in water-supply wells, Central Valley, California, USA

    Science.gov (United States)

    Jurgens, B. C.; Bohlke, J. K.; Kauffman, L. J.; Belitz, K.

    2013-12-01

    Age distributions for 30 production wells (mostly public-supply) were determined using two methods: 1) calibration of age tracer data with lumped parameter models (LPMs) and 2) by advective particle tracking (PT) simulations using MODPATH and a regional steady-state groundwater flow model. The LPMs were calibrated with measurements of 3H, 3He(trit), and 14C by minimizing the Chi-square test statistic using a non-linear solver. A partial exponential model (PEM) was the primary LPM used in this study and a combination of two PEMs were used in cases where binary age mixtures were identified. The PEM is a reformulated version of the exponential model that is parameterized to simulate the age distribution in a well that is screened over any finite interval within the aquifer. The regional numerical model was calibrated to water-levels and gradients, and simulated PT age tracer concentrations were calibrated to the MODPATH porosity value. Age distributions were then used to predict nitrate concentrations in wells using agricultural application rates of nitrate in the central eastside of the San Joaquin Valley, California. Both methods showed that wells in the study area captured groundwater with a broad range of ages, spanning decades to millennia. Age distributions from the LPMs predicted age tracer and nitrate concentrations more accurately than the regional PT simulation; whereas PT simulations incorporating more detailed information about water-levels and hydraulic gradients near wells also provided good fits. 14C concentrations were not simulated well by the regional steady-state model, especially for wells with a significant fraction of old groundwater, because the model simulates the current, perturbed system and does not simulate recharge rates and velocities of the predevelopment system. Results from the LPMs yielded an average recharge rate of 0.55 m/yr, which was similar to the average recharge rate of 0.54 m/yr determined from a water budget analysis for the

  5. Reprint of "Methylmercury production in and export from agricultural wetlands in California, USA: the need to account for physical transport processes into and out of the root zone".

    Science.gov (United States)

    Bachand, P A M; Bachand, S M; Fleck, J A; Alpers, C N; Stephenson, M; Windham-Myers, L

    2014-06-15

    Concentration and mass balance analyses were used to quantify methylmercury (MeHg) loads from conventional (white) rice, wild rice, and fallowed fields in northern California's Yolo Bypass. These analyses were standardized against chloride to distinguish transport pathways and net ecosystem production (NEP). During summer, chloride loads were both exported with surface water and moved into the root zone at a 2:1 ratio. MeHg and dissolved organic carbon (DOC) behaved similarly with surface water and root zone exports at ~3:1 ratio. These trends reversed in winter with DOC, MeHg, and chloride moving from the root zone to surface waters at rates opposite and exceeding summertime root zone fluxes. These trends suggest that summer transpiration advectively moves constituents from surface water into the root zone, and winter diffusion, driven by concentration gradients, subsequently releases those constituents into surface waters. The results challenge a number of paradigms regarding MeHg. Specifically, biogeochemical conditions favoring microbial MeHg production do not necessarily translate to synchronous surface water exports; MeHg may be preserved in the soils allowing for release at a later time; and plants play a role in both biogeochemistry and transport. Our calculations show that NEP of MeHg occurred during both summer irrigation and winter flooding. Wild rice wet harvesting and winter flooding of white rice fields were specific practices that increased MeHg export, both presumably related to increased labile organic carbon and disturbance. Outflow management during these times could reduce MeHg exports. Standardizing MeHg outflow:inflow concentration ratios against natural tracers (e.g. chloride, EC) provides a simple tool to identify NEP periods. Summer MeHg exports averaged 0.2 to 1μgm(-2) for the different agricultural wetland fields, depending upon flood duration. Average winter MeHg exports were estimated at 0.3μgm(-2). These exports are within the range

  6. Methylmercury production in and export from agricultural wetlands in California, USA: the need to account for physical transport processes into and out of the root zone.

    Science.gov (United States)

    Bachand, P A M; Bachand, S M; Fleck, J A; Alpers, C N; Stephenson, M; Windham-Myers, L

    2014-02-15

    Concentration and mass balance analyses were used to quantify methylmercury (MeHg) loads from conventional (white) rice, wild rice, and fallowed fields in northern California's Yolo Bypass. These analyses were standardized against chloride to distinguish transport pathways and net ecosystem production (NEP). During summer, chloride loads were both exported with surface water and moved into the root zone at a 2:1 ratio. MeHg and dissolved organic carbon (DOC) behaved similarly with surface water and root zone exports at ~3:1 ratio. These trends reversed in winter with DOC, MeHg, and chloride moving from the root zone to surface waters at rates opposite and exceeding summertime root zone fluxes. These trends suggest that summer transpiration advectively moves constituents from surface water into the root zone, and winter diffusion, driven by concentration gradients, subsequently releases those constituents into surface waters. The results challenge a number of paradigms regarding MeHg. Specifically, biogeochemical conditions favoring microbial MeHg production do not necessarily translate to synchronous surface water exports; MeHg may be preserved in the soils allowing for release at a later time; and plants play a role in both biogeochemistry and transport. Our calculations show that NEP of MeHg occurred during both summer irrigation and winter flooding. Wild rice wet harvesting and winter flooding of white rice fields were specific practices that increased MeHg export, both presumably related to increased labile organic carbon and disturbance. Outflow management during these times could reduce MeHg exports. Standardizing MeHg outflow:inflow concentration ratios against natural tracers (e.g. chloride, EC) provides a simple tool to identify NEP periods. Summer MeHg exports averaged 0.2 to 1 μg m(-2) for the different agricultural wetland fields, depending upon flood duration. Average winter MeHg exports were estimated at 0.3 μg m(-2). These exports are within the

  7. Botaanikud Chamisso ja Eschscholtz Californias / Tiiu Speek

    Index Scriptorium Estoniae

    Speek, Tiiu, 1958-

    2012-01-01

    Loodusteadlaste A. von Chamisso ja J. Fr. Eschscholtzi osalemisest O. von Kotzebue ekspeditsioonidel (1815-1818 ning 1823-1826); reisidel kogutud ja kirjeldatud USA lääneosa ja California taimeliikidest ning neist koostatud herbaariumite saatusest

  8. Refurbished extensometer sites improve the quality and frequency of aquifer-system compaction and groundwater-level measurements, San Joaquin Valley, California, USA

    Science.gov (United States)

    Sneed, M.; Brandt, J.; Solt, M.

    2012-12-01

    Extensive groundwater withdrawal from unconsolidated deposits in the San Joaquin Valley caused widespread aquifer-system compaction and land subsidence locally exceeding 8 meters (m) between 1926 and 1970. To identify the extent of subsidence, a network of 31 extensometers was installed in the 1960s. Importation of surface water in the early 1970s resulted in decreased groundwater pumping, a steady water-level recovery, and a reduced rate of compaction; consequently, data collection was sharply reduced. However, reduced surface-water availability during 1976-77, 1987-92, and 2007-09 caused increased groundwater pumping, lowered water levels, and renewed compaction. The resulting land subsidence has reduced freeboard and flow capacity of the Delta-Mendota Canal (DMC), the California Aqueduct (AQ), and other canals. Four deep (>300-m) cable-type extensometers from the old network, located along the DMC and AQ, were refurbished to identify existing and future subsidence, and to improve the quality and frequency of compaction measurements. Measurement quality was improved at three of these sites by replacing the existing reference tables, which sit atop concrete pads, with new reference tables cemented in 5.5-m boreholes and decoupled from the concrete pads to minimize the measurement of near-surface deformation. A new reference table could not be constructed at the fourth site due to restrictive drill-rig access. Insulated metal shelters were constructed to protect the equipment against environmental exposure at all sites. The frequencies of compaction and water-level measurements at the extensometer sites were improved by instrumenting each with a linear potentiometer and one or more submersible pressure transducers, respectively. An analog dial gauge was installed on each extensometer to provide data continuity in cases of electronic data interruption and to provide verification of potentiometer data. Aquifer-system compaction data from all four sites show

  9. Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds

    Energy Technology Data Exchange (ETDEWEB)

    Davis, J.A., E-mail: jay@sfei.org [San Francisco Estuary Institute, 4911 Central Avenue, Richmond, CA 94804 (United States); Looker, R.E. [San Francisco Bay Regional Water Quality Control Board, 1515 Clay Street, Suite 1400, Oakland, CA 94612 (United States); Yee, D. [San Francisco Estuary Institute, 4911 Central Avenue, Richmond, CA 94804 (United States); Marvin-Di Pasquale, M. [U.S. Geological Survey, Water Resources Division/MS 480, 345 Middlefield Road, Menlo Park, CA 94025 (United States); Grenier, J.L. [San Francisco Estuary Institute, 4911 Central Avenue, Richmond, CA 94804 (United States); Austin, C.M. [San Francisco Bay Regional Water Quality Control Board, 1515 Clay Street, Suite 1400, Oakland, CA 94612 (United States); McKee, L.J.; Greenfield, B.K. [San Francisco Estuary Institute, 4911 Central Avenue, Richmond, CA 94804 (United States); Brodberg, R. [California Office of Environmental Health Hazard Assessment, California Environmental Protection Agency, 1001 I Street, Sacramento, CA 95812 (United States); Blum, J.D. [Department of Geological Sciences, University of Michigan, 1100 North University Avenue, Ann Arbor, MI 48109 (United States)

    2012-11-15

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  10. Reducing methylmercury accumulation in the food webs of San Francisco Bay and its local watersheds

    International Nuclear Information System (INIS)

    San Francisco Bay (California, USA) and its local watersheds present an interesting case study in estuarine mercury (Hg) contamination. This review focuses on the most promising avenues for attempting to reduce methylmercury (MeHg) contamination in Bay Area aquatic food webs and identifying the scientific information that is most urgently needed to support these efforts. Concern for human exposure to MeHg in the region has led to advisories for consumption of sport fish. Striped bass from the Bay have the highest average Hg concentration measured for this species in USA estuaries, and this degree of contamination has been constant for the past 40 years. Similarly, largemouth bass in some Bay Area reservoirs have some of the highest Hg concentrations observed in the entire US. Bay Area wildlife, particularly birds, face potential impacts to reproduction based on Hg concentrations in the tissues of several Bay species. Source control of Hg is one of the primary possible approaches for reducing MeHg accumulation in Bay Area aquatic food webs. Recent findings (particularly Hg isotope measurements) indicate that the decades-long residence time of particle-associated Hg in the Bay is sufficient to allow significant conversion of even the insoluble forms of Hg into MeHg. Past inputs have been thoroughly mixed throughout this shallow and dynamic estuary. The large pool of Hg already present in the ecosystem dominates the fraction converted to MeHg and accumulating in the food web. Consequently, decreasing external Hg inputs can be expected to reduce MeHg in the food web, but it will likely take many decades to centuries before those reductions are achieved. Extensive efforts to reduce loads from the largest Hg mining source (the historic New Almaden mining district) are underway. Hg is spread widely across the urban landscape, but there are a number of key sources, source areas, and pathways that provide opportunities to capture larger quantities of Hg and reduce loads

  11. "Georgicat" näeb USA-s Californias

    Index Scriptorium Estoniae

    2000-01-01

    Sulev Keeduse mängufilm "Georgica" linastub Berkeley kinos Fine Arts Cinema. Edasi läheb film Poola eesti filmi päevadele 6.-10. novembrini. Seal näidatakse ka V. Kuigi lühimängufilmi "Lurjus" ja R. Heidmetsa lastefilmi "Kallis härra Q"

  12. California Bioregions

    Data.gov (United States)

    California Department of Resources — California regions developed by the Inter-agency Natural Areas Coordinating Committee (INACC) were digitized from a 1:1,200,000 California Department of Fish and...

  13. The influence of mosquito control recirculation ditches on plant biomass, production and composition in two San Francisco Bay salt marshes

    Science.gov (United States)

    Balling, Steven S.; Resh, Vincent H.

    1983-02-01

    Vegetation of two San Francisco Bay, California, U.S.A. tidal marshes was examined to determine the effects of recirculation ditches designed to eliminate mosquito-breeding. Salicornia virginica L. biomass and production in Petaluma Marsh and plant species composition in Suisun Marsh were measured with respect to distance from ditches and natural channels. In Petaluma Marsh, both annual above-ground production estimates and infrared aerial photographs indicated that S. virginica growth rates were higher near ditches than in the open marsh. In the floristically diverse, less saline Suisun Marsh, there was a displacement of the more salt tolerant S. virginica by the less tolerant Juncus balticus Willd. and a significantly greater number of species near the ditches. Results in both marshes are correlated with low groundwater salinities near ditches and suggest that tidal circulation within ditches locally ameliorates extremes in soil conditions.

  14. Floodplain Mapping, SANTA CLARA COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Floodplain Mapping/Redelineation study deliverables depict and quantify the flood risks for the study area. The primary risk classifications used are the...

  15. Floodplain Mapping, SOLANO COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Floodplain Mapping/Redelineation study deliverables depict and quantify the flood risks for the study area. The primary risk classifications used are the...

  16. A method for examining the geospatial distribution of CO2 storage resources applied to the Pre-Punta Gorda Composite and Dollar Bay reservoirs of the South Florida Basin, U.S.A

    Science.gov (United States)

    Roberts-Ashby, Tina; Brandon N. Ashby

    2016-01-01

    This paper demonstrates geospatial modification of the USGS methodology for assessing geologic CO2 storage resources, and was applied to the Pre-Punta Gorda Composite and Dollar Bay reservoirs of the South Florida Basin. The study provides detailed evaluation of porous intervals within these reservoirs and utilizes GIS to evaluate the potential spatial distribution of reservoir parameters and volume of CO2 that can be stored. This study also shows that incorporating spatial variation of parameters using detailed and robust datasets may improve estimates of storage resources when compared to applying uniform values across the study area derived from small datasets, like many assessment methodologies. Geospatially derived estimates of storage resources presented here (Pre-Punta Gorda Composite = 105,570 MtCO2; Dollar Bay = 24,760 MtCO2) were greater than previous assessments, which was largely attributed to the fact that detailed evaluation of these reservoirs resulted in higher estimates of porosity and net-porous thickness, and areas of high porosity and thick net-porous intervals were incorporated into the model, likely increasing the calculated volume of storage space available for CO2 sequestration. The geospatial method for evaluating CO2 storage resources also provides the ability to identify areas that potentially contain higher volumes of storage resources, as well as areas that might be less favorable.

  17. Wetland Tracker Data Collection Central Coast (Morro Bay Region)

    OpenAIRE

    Michie, Matthew; Watson, Fred; Casagrande, Joel

    2006-01-01

    The goal of this project was to gather information on wetland restoration projects in the Moro Bay, California, region. Data provided to the San Francisco Estuary Institute (SFEI) will be used to enhance a web-based, public access database, the Bay Area Wetland Project Tracker. Wetland Tracker provides information on the location, size, sponsors, habitats, contact persons, and status of included projects. Its website provides an interactive map of planned and completed wetland projects (ht...

  18. Southern Monterey Bay Littoral Cell CRSMP CEMEX Mine Dredge Pond 2008

    Data.gov (United States)

    California Department of Resources — Location of the CEMEX mine dredge pond at Lapis Sand Plant, Marina, CA. Southern Monterey Bay has been the most intensively mined shoreline in the U.S. Sand mining...

  19. Stream Habitat Reach Summary - San Francisco Bay, Central Coast [ds159

    Data.gov (United States)

    California Department of Resources — The Stream Habitat - San Francisco Bay, Central and South Coasts [ds159] shapefile contains four years of in-stream salmonid habitat data at the reach level. The...

  20. Eureka Littoral Cell CRSMP Humboldt Bay Mean Monthly Maximum Water Elevation 2011

    Data.gov (United States)

    California Department of Resources — The Humboldt Bay Shoreline Assessment and LiDAR Analysis was conducted by field mapping the entire shoreline and assigning an unique segment identifier based on a...

  1. Suspended-sediment dynamics in the tidal reach of a San Francisco Bay tributary

    Science.gov (United States)

    Shellenbarger, Gregory G.; Downing-Kunz, Maureen A.; Schoellhamer, David H.

    2015-11-01

    To better understand suspended-sediment transport in a tidal slough adjacent to a large wetland restoration project, we deployed continuously measuring temperature, salinity, depth, turbidity, and velocity sensors in 2010 at a near-bottom location in Alviso Slough (Alviso, California, USA). Alviso Slough is the downstream reach of the Guadalupe River and flows into the far southern end of San Francisco Bay. River flow is influenced by the Mediterranean climate, with high flows (˜90 m3 s-1) correlated to episodic winter storms and low base flow (˜0.85 m3 s-1) during the summer. Storms and associated runoff have a large influence on sediment flux for brief periods, but the annual peak sediment concentrations in the slough, which occur in April and May, are similar to the rest of this part of the bay and are not directly related to peak discharge events. Strong spring tides promote a large upstream sediment flux as a front associated with the passage of a salt wedge during flood tide. Neap tides do not have flood-directed fronts, but a front seen sometimes during ebb tide appears to be associated with the breakdown of stratification in the slough. During neap tides, stratification likely suppresses sediment transport during weaker flood and ebb tides. The slough is flood dominant during spring tides, and ebb dominant during neap tides. Extreme events in landward (salt wedge) and bayward (rainfall events) suspended-sediment flux account for 5.0 % of the total sediment flux in the slough and only 0.55 % of the samples. The remaining 95 % of the total sediment flux is due to tidal transport, with an imbalance in the daily tidal transport producing net landward flux. Overall, net sediment transport during this study was landward indicating that sediment in the sloughs may not be flushed to the bay and are available for sedimentation in the adjacent marshes and ponds.

  2. Conceptual Tools for Managing Two Monterey Bay Fisheries

    OpenAIRE

    Ish, Teresa Lin

    2003-01-01

    I developed two conceptual models addressing fishery questions in the Monterey Bay motivated by 1) the California Market Squid (Loligo opalescens) and 2) marine reserves as a recovery and management tool. The model for California Market Squid incorporates the close ties between environmental variability and squid life history. Inclusion of environmental factors in the model provides a biological mechanism contributing to the large fluctuations that occur in the fishery. Furthermore, I predict...

  3. San Diego Bay Bibliography

    OpenAIRE

    Brueggeman, Peter

    1994-01-01

    The San Diego Bay Bibliography references the scientific & gray literature on the Bay up through 1994 and it is NOT current. Compiled from numerous resources (including Hubbs-Sea World Research Institute, Regional Water Quality Control Board, & local library catalogs), it is not comprehensive since so the Bay literature is elusive. In addition, there can be duplicate references varying in completeness. The San Diego Bay Bibliography is the outcome of discussion and networking within ...

  4. Phenotypes and Virulence among Staphylococcus aureus USA100, USA200, USA300, USA400, and USA600 Clonal Lineages

    OpenAIRE

    King, Jessica M.; Kulhankova, Katarina; Stach, Christopher S.; Vu, Bao G.; Salgado-Pabón, Wilmara

    2016-01-01

    ABSTRACT Staphylococcus aureus diseases affect ~500,000 individuals per year in the United States. Worldwide, the USA100, USA200, USA400, and USA600 lineages cause many of the life-threatening S. aureus infections, such as bacteremia, infective endocarditis, pneumonia, toxic shock syndrome, and surgical site infections. However, the virulence mechanisms associated with these clonal lineages, in particular the USA100 and USA600 isolates, have been severely understudied. We investigated the vir...

  5. Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in South San Francisco Bay, California-2010

    Science.gov (United States)

    Dyke, Jessica; Parcheso, Francis; Thompson, Janet K.; Cain, Daniel J.; Luoma, Samuel N.; Hornberger, Michelle I.

    2011-01-01

    Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, Calif. This report includes the data collected for the period January 2010 to December 2010 and extends a critical long-term biogeochemical record that dates back to 1974. These data serve as the basis for the City of Palo Alto's Near-Field Receiving Water Monitoring Program initiated in 1994.

  6. Experiencias de mujeres mexicanas migrantes indocumentadas en California, Estados Unidos, en su acceso a los servicios de salud sexual y reproductiva: estudio de caso Experiências de mulheres mexicanas migrantes sem documentação na Califórnia, Estados Unidos, no acesso aos serviços de saúde sexual e reprodutiva: estudo de caso Experiences of undocumented Mexican migrant women when accessing sexual and reproductive health services in California, USA: a case study

    Directory of Open Access Journals (Sweden)

    Sandra G. García

    2013-05-01

    ção das enfermidades. Deve-se incorporar a perspectiva intercultural nos serviços de saúde.This study focuses on the experience of Mexican women migrants in California, USA, with the use of formal health services for sexual and reproductive health issues. The authors used a qualitative interpretative approach with life histories, interviewing eight female users of healthcare services in California and seven key informants in Mexico and California. There were three main types of barriers to healthcare: immigration status, language, and gender. Participants reported long waiting times, discriminatory attitudes, and high cost of services. A combination of formal and informal healthcare services was common. The assessment of quality of care was closely related to undocumented immigration status. Social support networks are crucial to help solve healthcare issues. Quality of care should take intercultural health issues into account.

  7. 2010 Northern San Francisco Bay Area Lidar: Portions of Alameda, Contra Costa, Marin, Napa, San Francisco, Solano, and Sonoma Counties

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This Light Detection and Ranging (LiDAR) dataset is a survey of northern San Francisco Bay, California. The project area consists of approximately 437 square miles...

  8. Bair Island Restoration and Management Plan : Don Edwards San Francisco Bay National Wildlife Refuge : Bair Island Ecological Reserve

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The U.S. Fish and Wildlife Service, Don Edwards San Francisco Bay National Wildlife Refuge, and the California Department of Fish and Game are proposing adoption of...

  9. California Air Basins

    Data.gov (United States)

    California Department of Resources — Air ResourcesCalifornia Air Resources BoardThe following datasets are from the California Air Resources Board: * arb_california_airbasins - California Air BasinsThe...

  10. Summary of California Clapper Rail winter populations in the San Francisco National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The California Clapper rail (Rallus lonqirostris obsoletus) is a seldom seen resident in some of the remaining tidal salt marshes in San Francisco Bay. The...

  11. Tampa Bay: Chapter N

    Science.gov (United States)

    Handley, Larry; Spear, Kathryn; Cross, Lindsay; Baumstark, René; Moyer, Ryan; Thatcher, Cindy

    2013-01-01

    Tampa Bay is Florida’s largest open-water estuary and encompasses an area of approximately 1036 km2 (400 mi2) (Burgan and Engle, 2006; TBNEP, 2006). The Bay’s watershed drains 5,698 km2 (2,200 mi2) of land and includes freshwater from the Hillsborough River to the north east, the Alafia and Little Manatee rivers to the east, and the Manatee River to the south (Figure 1). Freshwater inflow also enters the bay from the Lake Tarpon Canal, from small tidal tributaries, and from watershed runoff. Outflow travels from the upper bay segments (Hillsborough Bay and Old Tampa Bay) into Middle and Lower Tampa Bay. Southwestern portions of the water shed flow through Boca Ciega Bay into the Intracoastal Waterway and through the Southwest Channel and Passage Key Inlet into the Gulf of Mexico. The average depth in most of Tampa Bay is only 3.4 m (11 ft); however, 129 km (80 mi) of shipping channels with a maximum depth of 13.1 m (43 ft) have been dredged over time and are regularly maintained. These channels help to support the three ports within the bay, as well as commercial and recreational boat traffic.

  12. eBay.com

    DEFF Research Database (Denmark)

    Engholm, Ida

    2014-01-01

    Celebrated as one of the leading and most valuable brands in the world, eBay has acquired iconic status on par with century-old brands such as Coca-Cola and Disney. The eBay logo is now synonymous with the world’s leading online auction website, and its design is associated with the company...

  13. Carbon Sequestration in Mediterranean Tidal Wetlands: San Francisco Bay and the Ebro River Delta (Invited)

    Science.gov (United States)

    Callaway, J.; Fennessy, S.; Ibanez, C.

    2013-12-01

    Tidal wetlands accumulate soil carbon at relatively rapid rates, in large part because they build soil to counteract increases in sea-level rise. Because of the rapid rates of carbon sequestration, there is growing interest in evaluating carbon dynamics in tidal wetlands around the world; however, few measurements have been completed for mediterranean-type tidal wetlands, which tend to have relatively high levels of soil salinity, likely affecting both plant productivity and decomposition rates. We measured sediment accretion and carbon sequestration rates at tidal wetlands in two mediterranean regions: the San Francisco Bay Estuary (California, USA) and the Ebro River Delta (Catalonia, Spain). Sampling sites within each region represented a range of conditions in terms of soil salinity and plant communities, and these sites serve as potential analogs for long-term carbon sequestration in restored wetlands, which could receive credits under emerging policies for carbon management. Within San Francisco Bay, we collected six sediment cores per site at four salt marshes and two brackish tidal wetlands (two transects with three stations per transect at each site) in order to identify spatial variation both within and among wetlands in the Estuary. At the Ebro Delta, individual sediment cores were collected across 14 tidal wetland sites, including salt and brackish marshes from impounded areas, river mouths, coastal lagoon, and open bay settings. Cores were collected to 50 cm, and cores were dated using 137Cs and 210Pb. Most sites within San Francisco accreted 0.3-0.5 cm/yr, with slightly higher rates of accretion at low marsh stations; accretions rates based on 137Cs were slightly higher than those based on 210Pb, likely because of the shorter time frame covered by 137Cs dating. Accretion rates from the Ebro Delta sites were similar although more variable, with rates based on 137Cs ranging from 0.1 to 0.9 cm/yr and reflecting the wide range of conditions and management

  14. AVIRIS spectra of California wetlands

    Science.gov (United States)

    Gross, Michael F.; Ustin, Susan L.; Klemas, Vytautas

    1988-01-01

    Spectral data gathered by the AVIRIS from wetlands in the Suisun Bay area of California on 13 October 1987 were analyzed. Spectra representing stands of numerous vegetation types (including Sesuvium verrucosum, Scirpus acutus and Scirpus californicus, Xanthium strumarium, Cynadon dactylon, and Distichlis spicata) and soil were isolated. Despite some defects in the data, it was possible to detect vegetation features such as differences in the location of the chlorophyll red absorption maximum. Also, differences in cover type spectra were evident in other spectral regions. It was not possible to determine if the observed features represent noise, variability in canopy architecture, or chemical constituents of leaves.

  15. Delineating incised stream sediment sources within a San Francisco Bay tributary basin

    Science.gov (United States)

    Bigelow, Paul; Benda, Lee; Pearce, Sarah

    2016-07-01

    Erosion and sedimentation pose ubiquitous problems for land and watershed managers, requiring delineation of sediment sources and sinks across landscapes. However, the technical complexity of many spatially explicit erosion models precludes their use by practitioners. To address this critical gap, we demonstrate a contemporary use of applied geomorphometry through a straightforward GIS analysis of sediment sources in the San Francisco Bay Area in California, USA, designed to support erosion reduction strategies. Using 2 m lidar digital elevation models, we delineated the entire river network in the Arroyo Mocho watershed (573 km2) at the scale of ˜ 30 m segments and identified incised landforms using a combination of hillslope gradient and planform curvature. Chronic erosion to the channel network was estimated based on these topographic attributes and the size of vegetation, and calibrated to sediment gage data, providing a spatially explicit estimate of sediment yield from incised channels across the basin. Rates of erosion were summarized downstream through the channel network, revealing patterns of sediment supply at the reach scale. Erosion and sediment supply were also aggregated to subbasins, allowing comparative analyses at the scale of tributaries. The erosion patterns delineated using this approach provide land use planners with a robust framework to design erosion reduction strategies. More broadly, the study demonstrates a modern analysis of important geomorphic processes affected by land use that is easily applied by agencies to solve common problems in watersheds, improving the integration between science and environmental management.

  16. Retrospective study of cattle poisonings in California: recognition, diagnosis, and treatment

    OpenAIRE

    Puschner B; Varga A

    2012-01-01

    Anita Varga,1 Birgit Puschner21William R Pritchard Veterinary Medical Teaching Hospital, Large Animal Clinic, School of Veterinary Medicine, University of California, Davis, CA, USA; 2Department of Molecular Biosciences and the California Animal Health and Food Safety Laboratory System, School of Veterinary Medicine, University of California, Davis, CA, USAAbstract: In this retrospective study all suspect bovine intoxications submitted to the California Animal Health and Food Safety Laborator...

  17. Monitoring Drosophila suzukii Matsumura in Oregon, USA sweet cherry orchards.

    Science.gov (United States)

    Drosophila suzukii rapidly became a significant cherry pest in the western United States after it was observed damaging cherries in 2009 in California. It has caused significant damage to ripening cherries in all major USA cherry production districts leading to increased management costs and reduced...

  18. Järelkajad Eesti presidendi visiidist USA-sse

    Index Scriptorium Estoniae

    2006-01-01

    Töövisiit Ameerika Ühendriikidesse 17.-21.01.2006. Ülevaade president Arnold Rüütli USA-vsiidist, kohtumisest San Francisco ja Sunnyvale'i linnapeadega, investor Steve Jürvetsoniga, kohalike väliseestlastega, külaskäigust Silicon Valley tehnoloogiaettevõtetesse, California Ülikooli biotehnoloogia uurimiskeskusesse

  19. TEMPORAL AND SPATIAL VARIATION IN PLASMA THYROXINE (T4) CONCENTRATIONS IN JUVENILE ALLIGATORS COLLECTED FROM LAKE OKEECHOBEE AND THE NORTHERN EVERGLADES, FLORIDA, USA

    Science.gov (United States)

    We examined variation in plasma thyroxine (T4) in juvenile American alligators (Alligator mississippiensis) collected from three sites within the Kissimmee River drainage basin (FL, USA). Based on historical sediment data, Moonshine Bay served as the low contaminant exposure site...

  20. Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California; 2009

    Science.gov (United States)

    Dyke, Jessica; Parchaso, Janet K.; Thompson, Janet K.; Cain, Daniel J.; Luoma, Samuel N.; Hornberger, Michelle I.

    2010-01-01

    Results reported herein include trace element concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica (Cohen and Carlton, 1995)), clam reproductive activity, and benthic macroinvertebrate community structure for a mudflat one kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay. This report includes data collected for the period January 2009 to December 2009 and extends a critical long-term biogeochemical record dating back to 1974. These data serve as the basis for the City of Palo Alto's Near-Field Receiving Water Monitoring Program, initiated in 1994. In 2009, metal concentrations in both sediments and clam tissue were among the lowest concentrations on record and consistent with results observed since 1991. Following significant reductions in the late 1980s, silver (Ag) and copper (Cu) concentrations appeared to have stabilized. Annual mean concentrations have fluctuated modestly (2-4 fold) in a nondirectional manner. Data for other metals, including chromium, mercury, nickel, selenium, vanadium, and zinc, have been collected since 1994. Over this period, concentrations of these elements, which more likely reflect regional inputs and systemwide processes, have remained relatively constant, aside from typical seasonal variation that is common to all elements. Within years, the winter months (January-March) generally exhibit maximum concentrations, with a decline to annual minima in spring through fall. Mercury (Hg) in sediments and M. petalum were comparable to concentrations observed in 2008 and were generally consistent with data from previous years. Selenium (Se) concentrations in sediment varied among years and showed no sustained temporal trend. In 2009, sedimentary Se concentrations declined from the record high concentrations observed in 2008 to concentrations that were among the lowest on record. Selenium in M. petalum was unchanged from 2008

  1. Near-Field Receiving Water Monitoring of Trace Metals and a Benthic Community Near the Palo Alto Regional Water Quality Control Plant in South San Francisco Bay, California: 2006

    Science.gov (United States)

    Lorenzi, Allison H.; Cain, Daniel J.; Parcheso, Francis; Thompson, Janet K.; Luoma, Samuel N.; Hornberger, Michelle I.; Dyke, Jessica; Cervantes, Raul; Shouse, Michelle K.

    2007-01-01

    Results reported herein include trace element concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica (Cohen and Carlton 1995)), clam reproductive activity, and benthic macroinvertebrate community structure for a mudflat one kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant in South San Francisco Bay. This report includes data collected for the period January 2006 to December 2006, and extends a critical long-term biogeochemical record dating back to 1974. These data serve as the basis for the City of Palo Alto's Near-Field Receiving Water Monitoring Program, initiated in 1994. Metal concentrations in both sediments and clam tissue during 2006 were consistent with results observed since 1990. Most notably, copper and silver concentrations in sediment and clam tissue increased in the last year but the values remain well within range of past data. Other metals such as chromium, nickel, vanadium, and zinc remained relatively constant throughout the year except for maximum values generally occurring in winter months (January-March). Mercury levels in sediment and clam tissue were some of the lowest seen on record. Conversely, selenium concentrations reached a maximum level but soon returned to baseline levels. In all, metal concentrations in sediments and tissue remain within past findings. There are no obvious directional trends (increasing or decreasing). Analyses of the benthic-community structure of a mudflat in South San Francisco Bay over a 31-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam M. petalum from the same area. Analysis of the reproductive activity of M. petalum shows increases in reproductive activity concurrent with the decline in metal concentrations in the tissues of this organism. Reproductive activity is presently stable, with almost all animals

  2. Near-Field Receiving Water Monitoring of Trace Metals and a Benthic Community Near the Palo Alto Regional Water Quality Control Plant in South San Francisco Bay, California: 2007

    Science.gov (United States)

    Lorenzi, Allison H.; Cain, Daniel J.; Parcheso, Francis; Thompson, Janet K.; Luoma, Samuel N.; Hornberger, Michelle I.; Dyke, Jessica

    2008-01-01

    Results reported herein include trace element concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica (Cohen and Carlton 1995)), clam reproductive activity, and benthic macroinvertebrate community structure for a mudflat one kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant in South San Francisco Bay. This report includes data collected for the period January 2007 to December 2007, and extends a critical long-term biogeochemical record dating back to 1974. These data serve as the basis for the City of Palo Alto?s Near-Field Receiving Water Monitoring Program, initiated in 1994. Metal concentrations in both sediments and clam tissue during 2007 remained consistent with results observed since 1990. Most notably, copper and silver concentrations in sediment and clam tissue are elevated for the second consecutive year, but the values remain well within the range of past findings. Other metals such as chromium, nickel, vanadium, and zinc remained relatively constant throughout the year except for maximum values that generally occur in winter months (January-March). Mercury levels in sediment and clam tissue were some of the lowest seen on record. Last year?s elevated selenium levels appear to be transient, and selenium concentrations have returned to background levels. Overall, metal concentrations in sediments and tissue remain within past findings. Analyses of the benthic-community structure of a mudflat in South San Francisco Bay over a 31-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam, M. petalum, from the same area. Analysis of the reproductive activity of M. petalum shows increases in reproductive activity concurrent with the decline in metal concentrations in the tissues of this organism. Reproductive activity is presently stable, with almost all animals initiating

  3. Near-Field Receiving Water Monitoring of Trace Metals and a Benthic Community Near the Palo Alto Regional Water Quality Control Plant in South San Francisco Bay, California: 2008

    Science.gov (United States)

    Cain, Daniel J.; Thompson, Janet K.; Dyke, Jessica; Parcheso, Francis; Luoma, Samuel N.; Hornberger, Michelle I.

    2009-01-01

    Results reported herein include trace element concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica (Cohen and Carlton, 1995)), clam reproductive activity, and benthic macroinvertebrate community structure for a mudflat one kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay. This report includes data collected for the period January 2008 to December 2008 and extends a critical long-term biogeochemical record dating back to 1974. These data serve as the basis for the City of Palo Alto's Near-Field Receiving Water Monitoring Program, initiated in 1994. In 2008, metal concentrations in both sediments and clam tissue were among the lowest concentrations on record and consistent with results observed since 1991. Following significant reductions in the late 1980's, silver (Ag) and copper (Cu) concentrations appeared to have stabilized. Annual mean concentrations have fluctuated modestly (2-4 fold) in a nondirectional manner. Data for other metals, including chromium, mercury, nickel, selenium, vanadium, and zinc, have been collected since 1994. Over this period, concentrations of these elements, which more likely reflect regional inputs and systemwide processes, have remained relatively constant, aside from typical seasonal variation that is common to all elements. Within years, concentrations generally reach maximum in winter months (January-March) and decline to annual minima in spring through fall. Mercury (Hg) in sediments spiked to the highest observed level in January 2008. However, sedimentary concentrations for the rest of the year and concentrations of Hg in M. petalum for the entire year were consistent with data from previous years. Average selenium (Se) concentrations in sediment were the highest on record, but there is no evidence, yet, to suggest a temporal trend of increasing sedimentary Se. Selenium in M. petalum was not elevated relative to

  4. Phenotypes and Virulence among Staphylococcus aureus USA100, USA200, USA300, USA400, and USA600 Clonal Lineages.

    Science.gov (United States)

    King, Jessica M; Kulhankova, Katarina; Stach, Christopher S; Vu, Bao G; Salgado-Pabón, Wilmara

    2016-01-01

    Staphylococcus aureus diseases affect ~500,000 individuals per year in the United States. Worldwide, the USA100, USA200, USA400, and USA600 lineages cause many of the life-threatening S. aureus infections, such as bacteremia, infective endocarditis, pneumonia, toxic shock syndrome, and surgical site infections. However, the virulence mechanisms associated with these clonal lineages, in particular the USA100 and USA600 isolates, have been severely understudied. We investigated the virulence of these strains, in addition to strains in the USA200, USA300, and USA400 types, in well-established in vitro assays and in vivo in the rabbit model of infective endocarditis and sepsis. We show in the infective endocarditis and sepsis model that strains in the USA100 and USA600 lineages cause high lethality and are proficient in causing native valve infective endocarditis. Strains with high cytolytic activity or producing toxic shock syndrome toxin 1 (TSST-1) or staphylococcal enterotoxin C (SEC) caused lethal sepsis, even with low cytolytic activity. Strains in the USA100, USA200, USA400, and USA600 lineages consistently contained genes that encode for the enterotoxin gene cluster proteins, SEC, or TSST-1 and were proficient at causing infective endocarditis, while the USA300 strains lacked these toxins and were deficient in promoting vegetation growth. The USA100, USA200, and USA400 strains in our collection formed strong biofilms in vitro, whereas the USA200 and USA600 strains exhibited increased blood survival. Hence, infective endocarditis and lethal sepsis are multifactorial and not intrinsic to any one individual clonal group, further highlighting the importance of expanding our knowledge of S. aureus pathogenesis to clonal lineages causative of invasive disease. IMPORTANCE S. aureus is the leading cause of infective endocarditis in the developed world, affecting ~40,000 individuals each year in the United States, and the second leading cause of bacteremia (D. R

  5. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, BAY COUNTY, FLORIDA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  6. Bathymetry in Jobos Bay

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This image represents a 4x4 meter resolution bathymetric surface for Jobos Bay, Puerto Rico (in NAD83 UTM 19 North). The depth values are in meters referenced to...

  7. Hammond Bay Biological Station

    Data.gov (United States)

    Federal Laboratory Consortium — Hammond Bay Biological Station (HBBS), located near Millersburg, Michigan, is a field station of the USGS Great Lakes Science Center (GLSC). HBBS was established by...

  8. Logy Bay Fishing Settlement

    OpenAIRE

    S H Parsons and Sons

    2003-01-01

    202 x 151 mm. Showing the small inlet with moored rowing boats and rough wooden shacks built on the cliffside. Lying about seven miles from St. John's, Logy Bay was used as a summertime fishing station.

  9. Biscayne Bay Alongshore Epifauna

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Field studies to characterize the alongshore epifauna (shrimp, crabs, echinoderms, and small fishes) along the western shore of southern Biscayne Bay were started...

  10. Humboldt Bay Orthoimages

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set consists of 0.5-meter pixel resolution, four band orthoimages covering the Humboldt Bay area. An orthoimage is remotely sensed image data in which...

  11. In situ aerosol optics in Reno, NV, USA during and after the summer 2008 California wildfires and the influence of absorbing and non-absorbing organic coatings on spectral light absorption

    Directory of Open Access Journals (Sweden)

    M. Gyawali

    2009-10-01

    Full Text Available Hundreds of wildfires in Northern California were sparked by lightning during the summer of 2008, resulting in downwind smoke for the months of June and July. Comparisons are reported for aerosol optics measurements in Reno, Nevada made during the very smoky month of July and the relatively clean month of August. Photoacoustic instruments equipped with integrating nephelometers were used to measure aerosol light scattering and absorption coefficients at wavelengths of 405 nm and 870 nm, revealing a strong variation of aerosol light absorption with wavelength. Insight on fuels burned is gleaned from comparison of Ångström exponents of absorption (AEA versus single scattering albedo (SSA of the ambient measurements with laboratory biomass smoke measurements for many fuels. Measurements during the month of August, which were largely unaffected by fire smoke, exhibit surprisingly low AEA for aerosol light absorption when the SSA is highest, again likely as a consequence of the underappreciated wavelength dependence of aerosol light absorption by particles coated with non-absorbing organic and inorganic matter. Coated sphere calculations were used to show that AEA as large as 1.6 are possible for wood smoke even with non-absorbing organic coatings on black carbon cores, suggesting care be exercised when diagnosing AEA.

  12. Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in South San Francisco Bay, California: 2013

    Science.gov (United States)

    Dyke, Jessica; Cain, Daniel J.; Thompson, Janet K.; Kleckner, Amy E.; Parcheso, Francis; Hornberger, Michelle I.; Luoma, Samuel N.

    2014-01-01

    Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, Calif. This report includes the data collected by U.S. Geological Survey (USGS) scientists for the period January 2013 to December 2013. These data serve as the basis for the City of Palo Alto’s Near-Field Receiving Water Monitoring Program, initiated in 1994. Following significant reductions in the late 1980s, silver (Ag) and copper (Cu) concentrations in sediment and M. petalum appear to have stabilized. Data for other metals, including chromium (Cr), mercury (Hg), nickel (Ni), selenium (Se), and zinc (Zn), have been collected since 1994. Over this period, concentrations of these elements have remained relatively constant, aside from seasonal variation that is common to all elements. In 2013, concentrations of Ag and Cu in M. petalum varied seasonally in response to a combination of site-specific metal exposures and annual growth and reproduction, as reported previously. Seasonal patterns for other elements, including Cr, Ni, Zn, Hg, and Se, were generally similar in timing and magnitude as those for Ag and Cu. In M. petalum, all observed elements showed annual maxima in January–February and minima in April, except for Zn, which was lowest in December. In sediments, annual maxima also occurred in January–February, and minima were measured in June and September. In 2013, metal concentrations in both sediments and clam tissue were among the lowest concentrations on record. This record suggests that regional-scale factors now largely control sedimentary and bioavailable concentrations of Ag and Cu, as well as other elements of regulatory interest, at the Palo Alto site. Analyses of the benthic community structure of a

  13. Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California: 2011

    Science.gov (United States)

    Dyke, Jessica; Thompson, Janet K.; Cain, Daniel J.; Kleckner, Amy E.; Parcheso, Francis; Luoma, Samuel N.; Hornberger, Michelle I.

    2012-01-01

    Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, Calif. This report includes the data collected by U.S. Geological Survey (USGS) scientists for the period January 2011 to December 2011. These data serve as the basis for the City of Palo Alto's Near-Field Receiving Water Monitoring Program, initiated in 1994. Following significant reductions in the late 1980s, silver (Ag) and copper (Cu) concentrations in sediment and M. petalum appear to have stabilized. Data for other metals, including chromium, mercury, nickel, selenium, and zinc, have been collected since 1994. Over this period, concentrations of these elements have remained relatively constant, aside from seasonal variation that is common to all elements. In 2011, concentrations of Ag and Cu in M. petalum varied seasonally in response to a combination of site-specific metal exposures and annual growth and reproduction, as reported previously. Seasonal patterns for other elements, including Cr, Hg, Ni, Se, and Zn, were generally similar in timing and magnitude as those for Ag and Cu. In 2011, metal concentrations in both sediments and clam tissue were among the lowest concentrations on record. This record suggests that regional-scale factors now largely control sedimentary and bioavailable concentrations of Ag and Cu, as well as other elements of regulatory interest, at the Palo Alto site. Analyses of the benthic community structure of a mudflat in South San Francisco Bay over a 38-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam, M. petalum, from the same area. Analysis of the M. petalum community

  14. Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California, 2012

    Science.gov (United States)

    Dyke, Jessica; Thompson, Janet K.; Cain, Daniel J.; Kleckner, Amy E.; Parcheso, Francis; Luoma, Samuel N.; Hornberger, Michelle I.

    2013-01-01

    Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, Calif. This report includes the data collected by U.S. Geological Survey (USGS) scientists for the period January to December 2012. These data serve as the basis for the City of Palo Alto’s Near-Field Receiving Water Monitoring Program, initiated in 1994. Following significant reductions in the late 1980s, silver (Ag) and copper (Cu) concentrations in sediment and in M. petalum appear to have stabilized. Data for other metals, including chromium (Cr), mercury (Hg), nickel (Ni), selenium (Se), and zinc (Zn), have been collected since 1994. Over this period, concentrations of these elements have remained relatively constant, aside from seasonal variation that is common to all elements. In 2012, concentrations of Ag and Cu in M. petalum varied seasonally in response to a combination of site-specific metal exposures and annual growth and reproduction, as reported for previous time periods. Seasonal patterns for other elements, including Cr, Ni, Zn, Hg, and Se were generally similar in timing and magnitude as those for Ag and Cu. In 2012, metal concentrations in both sediments and clam tissue were among the lowest concentrations on record. This record suggests that regional-scale factors now largely control sedimentary and bioavailable concentrations of Ag and Cu, as well as other elements of regulatory interest, at the Palo Alto site. Analyses of the benthic community structure of a mudflat in South San Francisco Bay over a 39-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam, M. petalum, from the same area

  15. Age, composition, and areal distribution of the Pliocene Lawlor Tuff, and three younger Pliocene tuffs, California and Nevada

    Science.gov (United States)

    Sarna-Wojcicki, A. M.; Deino, A.L.; Fleck, R.J.; McLaughlin, R.J.; Wagner, D.; Wan, E.; Wahl, D.; Hillhouse, J.W.; Perkins, Michael

    2011-01-01

    The Lawlor Tuff is a widespread dacitic tephra layer produced by Plinian eruptions and ash flows derived from the Sonoma Volcanics, a volcanic area north of San Francisco Bay in the central Coast Ranges of California, USA. The younger, chemically similar Huichica tuff, the tuff of Napa, and the tuff of Monticello Road sequentially overlie the Lawlor Tuff, and were erupted from the same volcanic field. We obtain new laser-fusion and incremental-heating 40Ar/39Ar isochron and plateau ages of 4.834 ?? 0.011, 4.76 ?? 0.03, ???4.70 ?? 0.03, and 4.50 ?? 0.02 Ma (1 sigma), respectively, for these layers. The ages are concordant with their stratigraphic positions and are significantly older than those determined previously by the K-Ar method on the same tuffs in previous studies. Based on offsets of the ash-flow phase of the Lawlor Tuff by strands of the eastern San Andreas fault system within the northeastern San Francisco Bay area, total offset east of the Rodgers Creek-Healdsburg fault is estimated to be in the range of 36 to 56 km, with corresponding displacement rates between 8.4 and 11.6 mm/yr over the past ~4.83 Ma. We identify these tuffs by their chemical, petrographic, and magnetic characteristics over a large area in California and western Nevada, and at a number of new localities. They are thus unique chronostratigraphic markers that allow correlation of marine and terrestrial sedimentary and volcanic strata of early Pliocene age for their region of fallout. The tuff of Monticello Road is identified only near its eruptive source. ?? 2011 Geological Society of America.

  16. Distribution, Ecology and Potential Impacts of the Chinese Mitten Crab (Eriocheir sinensis) in San Francisco Bay

    OpenAIRE

    Rudnick, Deborah A; Halat, Kathleen M; Resh, Vincent H.

    2000-01-01

    The arrival of the Chinese mitten crab to the San Francisco Bay-San Joaquin Delta (Bay- Delta) ecosystem has been a source of widespread concern. This crab has spread from its native range, in China, to coastal ecosystems throughout Europe and, most recently, into North America. The Chinese mitten crab population in California has exploded within the last decade to cover hundreds of miles of the Bay-Delta and its tributaries. The Chinese mitten crab is a large, catadromous crab, moving from f...

  17. USA tankid tulevad Eestisse

    Index Scriptorium Estoniae

    2015-01-01

    USA on valmis Balti riikidesse ladustama lahingutanke, jalavämasinaid ja muud raskerelvastust. Eestisse paigutatakse sellisel juhul sõjatehnikat 150 USA sõjaväelase jaoks. Selline otsus peaks langetatama juba järgmisel nädalal

  18. The Fermi's Bayes Theorem

    CERN Document Server

    D'Agostini, G

    2005-01-01

    It is curious to learn that Enrico Fermi knew how to base probabilistic inference on Bayes theorem, and that some influential notes on statistics for physicists stem from what the author calls elsewhere, but never in these notes, {\\it the Bayes Theorem of Fermi}. The fact is curious because the large majority of living physicists, educated in the second half of last century -- a kind of middle age in the statistical reasoning -- never heard of Bayes theorem during their studies, though they have been constantly using an intuitive reasoning quite Bayesian in spirit. This paper is based on recollections and notes by Jay Orear and on Gauss' ``Theoria motus corporum coelestium'', being the {\\it Princeps mathematicorum} remembered by Orear as source of Fermi's Bayesian reasoning.

  19. Movements of radio-marked California Ridgway's rails during monitoring surveys: implications for population monitoring

    Science.gov (United States)

    Bui, Thuy-Vy D.; Takekawa, John Y.; Overton, Cory T.; Schultz, Emily R.; Hull, Joshua M.; Casazza, Michael L.

    2015-01-01

    The California Ridgway's rail Rallus obsoletus obsoletus (hereafter California rail) is a secretive marsh bird endemic to tidal marshes in the San Francisco Bay (hereafter bay) of California. The California rail has undergone significant range contraction and population declines due to a variety of factors, including predation and the degradation and loss of habitat. Call-count surveys, which include call playbacks, based on the standardized North American marsh bird monitoring protocol have been conducted throughout the bay since 2005 to monitor population size and distribution of the California rail. However, call-count surveys are difficult to evaluate for efficacy or accuracy. To measure the accuracy of call-count surveys and investigate whether radio-marked California rails moved in response to call-count surveys, we compared locations of radio-marked California rails collected at frequent intervals (15 min) to California rail detections recorded during call-count surveys conducted over the same time periods. Overall, 60% of radio-marked California rails within 200 m of observers were not detected during call-count surveys. Movements of radio-marked California rails showed no directional bias (P = 0.92) irrespective of whether or not playbacks of five marsh bird species (including the California rail) were broadcast from listening stations. Our findings suggest that playbacks of rail vocalizations do not consistently influence California rail movements during surveys. However, call-count surveys may underestimate California rail presence; therefore, caution should be used when relating raw numbers of call-count detections to population abundance.

  20. EFFECTS OF DDT SEDIMENT-CONTAMINATION ON MACROFAUNAL COMMUNITY STRUCTURE AND COMPOSITION IN SAN FRANCISCO BAY

    Science.gov (United States)

    The objectives of this study were to determine the effects of sediment contamination on the benthic macrofauna and to predict macrofaunal changes following remediation at a Superfund (uncontrolled hazardous waste) site in San Francisco Bay, CA, USA. DDT and its metabolites (sumDD...

  1. Humic Substances from Manila Bay and Bolinao Bay Sediments

    OpenAIRE

    Elma Llaguno

    1997-01-01

    The C,H,N composition of sedimentary humic acids (HA) extracted from three sites in Manila Bay and six sites in Bolinao Bay yielded H/C atomic ratios of 1.1-1.4 and N/C atomic ratios of 0.09 - 0.16. The Manila Bay HA's had lower H/C and N/C ratios compared to those from Bolinao Bay. The IR spectra showed prominent aliphatic C-H and amide I and II bands. Manila Bay HA's also had less diverse molecular composition based on the GC-MS analysis of the CuO and alkaline permanganate oxidation produc...

  2. Humic substances from Manila Bay and Bolinao Bay sediments

    International Nuclear Information System (INIS)

    The C, H, N composition of sedimentary humic acids (HA) extracted from three sites in Manila Bay and six sites in Bolinao Bay yielded H/C atomic ratios of 1.1-1.4 and N/C atomic ratios of 0.09-0.16. The Manila Bay HA's had lower H/C and C/C ratios compared to those from Bolinao Bay. The IR spectra showed prominent aliphatic C-H amide I and II bands. Manila Bay HA's also had less diverse molecular composition based on the GC-MS analysis of the CuO and alkaline permanganate oxidation products of the humic acids. (Author)

  3. Monterey Bay geoid

    OpenAIRE

    Boener, Joseph H.

    1994-01-01

    A high resolution local geoid was calculated for the Monterey Bay, CA using local gravimetry data, digital elevation data and The Ohio State University OSU91A global geopotential model. The theoretical accuracy of the calculated local geoid is 3.5 cm or better over 5 km. Local gravity data came from three sources: 1,549 land observations from the Defense Mapping Agency, 179 bottom gravity observations from two Naval Postgraduate School gravity surveys of Monterey Bay and 17,098 National Geode...

  4. Surveillance for zoonotic and selected pathogens in harbor seals Phoca vitulina from central California.

    Science.gov (United States)

    Greig, Denise J; Gulland, Frances M D; Smith, Woutrina A; Conrad, Patricia A; Field, Cara L; Fleetwood, Michelle; Harvey, James T; Ip, Hon S; Jang, Spencer; Packham, Andrea; Wheeler, Elizabeth; Hall, Ailsa J

    2014-09-30

    The infection status of harbor seals Phoca vitulina in central California, USA, was evaluated through broad surveillance for pathogens in stranded and wild-caught animals from 2001 to 2008, with most samples collected in 2007 and 2008. Stranded animals from Mendocino County to San Luis Obispo County were sampled at a rehabilitation facility: The Marine Mammal Center (TMMC, n = 175); wild-caught animals were sampled at 2 locations: San Francisco Bay (SF, n = 78) and Tomales Bay (TB, n = 97), that differed in degree of urbanization. Low prevalences of Salmonella, Campylobacter, Giardia, and Cryptosporidium were detected in the feces of stranded and wild-caught seals. Clostridium perfringens and Escherichia coli were more prevalent in the feces of stranded (58% [78 out of 135] and 76% [102 out of 135]) than wild-caught (42% [45 out of 106] and 66% [68 out of 106]) seals, whereas Vibrio spp. were 16 times more likely to be cultured from the feces of seals from SF than TB or TMMC (p neurona, and type A influenza was only detected in the wild-caught harbor seals (post-weaning age classes), whereas antibody titers to Leptospira spp. were detected in stranded and wild-caught seals. No stranded (n = 109) or wild-caught (n = 217) harbor seals had antibodies to phocine distemper virus, although a single low titer to canine distemper virus was detected. These results highlight the role of harbor seals as sentinel species for zoonotic and terrestrial pathogens in the marine environment. PMID:25266897

  5. Bay Delta Vegetation

    Data.gov (United States)

    California Department of Resources — CDF-FRAP compiled the 'best available' land cover data into a single data layer, to support the various analyses required for the 2002 Forest and Range Assessment....

  6. California Political Districts

    Data.gov (United States)

    California Department of Resources — This is a series of district layers pertaining to California'spolitical districts, that are derived from the California State Senateand State Assembly information....

  7. 40 CFR 131.38 - Establishment of numeric criteria for priority toxic pollutants for the State of California.

    Science.gov (United States)

    2010-07-01

    ... A to 40 CFR Part 423-126 Priority Pollutants. EPA has added the Chemical Abstracts Service (CAS... applies to additional waters of the United States in the State of California pursuant to 40 CFR 131.38(c...” (as defined in 40 CFR 122.2) to the State of California's inland surface waters or enclosed bays...

  8. Yaquina Bay Topobathy DEM

    Science.gov (United States)

    The U.S.EPA contracted with the U.S.ACE to obtain intertidal and subtidal bathymetric soundings of Yaquina Bay between Poole Slough and the South Beach Marina in 2002. These data were compiled with U.S.ACE subtidal soundings from 1999, 1998, 2000 and National Ocean Service soundi...

  9. USA Hire Testing Platform

    Data.gov (United States)

    Office of Personnel Management — The USA Hire Testing Platform delivers tests used in hiring for positions in the Federal Government. To safeguard the integrity of the hiring processes and ensure...

  10. 75 FR 32209 - North San Pablo Bay Restoration and Reuse Project

    Science.gov (United States)

    2010-06-07

    ... California Code of Regulations, which sets water quality standards and treatment reliability criteria for... Project would include upgrades to treatment processes and construction of pipelines, pump station, and..., and Sonoma County Water Agency (SCWA), acting as project administrator of the North Bay Water...

  11. Trends in counts of manatees Trichechus manatus latirostris from 1987 to 2006 in waters of Sarasota County, Florida, USA

    OpenAIRE

    Scolardi, Kerri M.; Schwacke, Lori H.; Koelsch, Jessica K.; Reynolds III, John E.; Kessenich, Teresa J.; Sprinkel, Jay M.; Gannon, Janet G.

    2009-01-01

    To demonstrate the utility of distributional surveys for assessing relative abundance and trends in counts for a discrete area of coastline, aerial survey data from Sarasota County, Florida, USA, were analyzed for the years 1987 to 2006. The study area was divided into 3 regions: the Sarasota Bay Region (SBR; N = 353 surveys), Lemon Bay (N = 368), and the Myakka River (N = 209). Manatee counts varied significantly across seasons (p < 0.0001) for all 3 regions. Manatees within Sarasota County ...

  12. SURVEY, SOLANO COUNTY, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — Solano County California, hydrographic survey data collected by Harned Surveying and Engineering (HSE). Data collection period January 1, 2011 through March 1, 2011.

  13. 1983 Coalinga, USA Images

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Location: Central California, 20.8 kilometers from Coalinga. Affected area: 205,000 square kilometers. Damage: $31 million. The most serious damage occurred in the...

  14. Tidal and seasonal effects on survival rates of the endangered California clapper rail: does invasive Spartina facilitate greater survival in a dynamic environment?

    Science.gov (United States)

    Overton, Cory T.; Casazza, Michael L.; Takekawa, John Y.; Strong, Donald R.; Holyoak, Marcel

    2014-01-01

    Invasive species frequently degrade habitats, disturb ecosystem processes, and can increase the likelihood of extinction of imperiled populations. However, novel or enhanced functions provided by invading species may reduce the impact of processes that limit populations. It is important to recognize how invasive species benefit endangered species to determine overall effects on sensitive ecosystems. For example, since the 1990s, hybrid Spartina (Spartina foliosa × alterniflora) has expanded throughout South San Francisco Bay, USA, supplanting native vegetation and invading mudflats. The endangered California clapper rail (Rallus longirostris obsoletus) uses the tall, dense hybrid Spartina for cover and nesting, but the effects of hybrid Spartina on clapper rail survival was unknown. We estimated survival rates of 108 radio-marked California clapper rails in South San Francisco Bay from January 2007 to March 2010, a period of extensive hybrid Spartina eradication, with Kaplan–Meier product limit estimators. Clapper rail survival patterns were consistent with hybrid Spartina providing increased refuge cover from predators during tidal extremes which flood native vegetation, particularly during the winter when the vegetation senesces. Model averaged annual survival rates within hybrid Spartina dominated marshes before eradication (Ŝ = 0.466) were greater than the same marshes posttreatment (Ŝ = 0.275) and a marsh dominated by native vegetation (Ŝ = 0.272). However, models with and without marsh treatment as explanatory factor for survival rates had nearly equivalent support in the observed data, lending ambiguity as to whether hybrid Spartina facilitated greater survival rates than native marshland. Conservation actions to aid in recovery of this endangered species should recognize the importance of available of high tide refugia, particularly in light of invasive species eradication programs and projections of future sea-level rise.

  15. New species of Haematoloechus (Digenea: Plagiorchidae in the lung of the foothill yellow-legged frog Rana boylii (Anura, from Humboldt County, California, USA Especie nueva de Haematoloechus (Digenea: Plagiorchidae del pulmón de la rana de patas amarillas Rana boylii (Anura, de Humboldt County, California, Estados Unidos de América

    Directory of Open Access Journals (Sweden)

    David Zamparo

    2011-06-01

    Full Text Available A new species of Haematoloechus is described from the lungs of Rana boylii from Humboldt County, California. The new species is similar to Haematoloechus buttensis, Haematoloechus kernensis, and Haematoloechus complexus in general course of the uterus and gonad shape. It is similar to H. buttensis by having a cirrus sac terminating midway between the posterior margin of the pharynx and the anterior margin of the ovary, and having a smaller oral/ventral sucker ratio; to H. complexus by having the genital pore ventral to the pharynx, and it is similar to H. kernensis by having a larger oral sucker to pharynx width ratio. The new species is unique by lacking an extra-cecal longitudinal uterine loop from the hind-body. Molecularly, the new species differs 1.04-1.15% in partial 28S sequence with respect to H. complexus, and a monophyletic grouping of these specimens in a phylogenetic analysis of all available sequence data consistent with the species-specific status proposed herein. Evidence is also presented to suggest that specimens identified as H. buttensis in Rana pretiosa from British Columbia, Canada represents a new, but still undescribed species. The importance of conducting biological inventories of helminths, along with continued monitoring of populations, and collections based taxonomy are related.Una especie nueva de Haematoloechus es descrita de los pulmones de Rana boylii de Humboldt County, California. La especie nueva guarda semejanza con Haematoloechus buttensis, Haematoloechus kernensis, y Haematoloechus complexus en la disposición general del útero y en la forma de las gónadas. Es similar a H. buttensis en que la bolsa del cirro finaliza entre el margen posterior de la faringe y el margen anterior del ovario, y en presentar una relación menor entre la ventosa oral y el acetábulo; a H. complexus por tener el poro genital ventral a la faringe, y a H. kernensis por tener una relación mayor del ancho de la ventosa oral contra la

  16. Composition and temporal patterns of larval fish communities in Chesapeake and Delaware Bays

    Directory of Open Access Journals (Sweden)

    Filipe Ribeiro

    2015-11-01

    Full Text Available Comparing larval fish assemblages in different estuaries provides insights about the coastal distribution of larval populations, larval transport, and adult spawning locations (Ribeiro et al. 2015. We simultaneously compared the larval fish assemblages entering two Middle Atlantic Bight (MAB estuaries (Delaware Bay and Chesapeake Bay, USA through weekly sampling from 2007 to 2009. In total, 43 taxa (32 families and 36 taxa (24 families were collected in Delaware and Chesapeake Bays, respectively. Mean taxonomic diversity, mean richness, and evenness were generally lower in Delaware Bay. Communities of both bays were dominated by Anchoa spp., Gobiosoma spp., Micropogonias undulatus, and Brevoortia tyrannus; Paralichthys spp. was more abundant in Delaware Bay and Microgobius thalassinus was more abundant in Chesapeake Bay. Inter-annual variation in the larval fish communities was low at both sites, with a relatively consistent composition across years, but strong seasonal (intra-annual variation in species composition occurred in both bays. Two groups were identified in Chesapeake Bay: a ‘winter’ group dominated by shelf-spawned species (e.g. M. undulatus and a ‘summer’ group comprising obligate estuarine species and coastal species (e.g. Gobiosoma spp. and Cynoscion regalis, respectively. In Delaware Bay, 4 groups were identified: a ‘summer’ group of mainly obligate estuarine fishes (e.g. Menidia sp. being replaced by a ‘fall’ group (e.g. Ctenogobius boleosoma and Gobionellus oceanicus; ‘winter’ and ‘spring’ groups were dominated by shelf-spawned (e.g. M. undulatus and Paralichthys spp. and obligate estuarine species (e.g. Leiostomus xanthurus and Pseudopleuronectes americanus, respectively. This study demonstrates that inexpensive and simultaneous sampling in different estuaries provides important insights into the variability in community structure of fish assemblages at large spatial scales.

  17. The combined role of bay and shelf modes in tsunami amplification along the coast

    Science.gov (United States)

    Bellotti, G.; Briganti, R.; Beltrami, G. M.

    2012-08-01

    The role of free modes of oscillation of coastal areas in tsunami amplification at the coast is investigated here. A finite element numerical model for modal analysis was applied and the numerically calculated natural frequencies were compared to those resulting from the spectra of measured sea level time series. Two case studies have been selected: that of Poverty Bay (New Zealand); and that of Kuluk Bay (Adak Island, Alaska, USA). The natural modes of the sea areas that extend in front of these locations are shown to play an important role in tsunami amplification at both the considered bays. In fact, the enhancement of wave height is found to be related to both the small-scale resonance controlled by the coastal shape, and the large-scale one governed by the continental shelf bathymetry. In particular, the model application to Poverty Bay reveals that some of the continental shelf modes are more energetic and occur at frequencies higher than the bay fundamental one. These modes are identified as both cross-shelf modes and trapped edge waves. On the other hand, the application to Kuluk Bay shows that geographical entrapment can be relevant for chain islands, making the bay and the continental shelf modes almost coincident.

  18. Upper Newport Bay Restoration Plan

    OpenAIRE

    Halsch, Chris; Wessling, Jaenna; Lister, Anne; Beck, Emily; Zembel, Richard; Yurko, Matt; Kimball, Sarah

    2016-01-01

    The overall goal of this restoration plan is to assist stakeholders in matching restoration projects with funding opportunities in order to increase the overall health of the Upper Newport Bay. Specifically, this document aims to assess current health and quality of native habitats in and around the bay, and to identify areas needing restoration. We have compiled data on the ecology of the bay, including extent of non-native plant invasion, restoration history and progress, site accessibility...

  19. Shallow benthic habitats of San Francisco Bay, California CMECS Geodatabase

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset has been developed for the National Oceanic and Atmospheric Administration's (NOAA) Office for Coastal Management (OCM) as a collaborative and...

  20. San Francisco Bay, California Coastal Digital Elevation Model

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA's National Geophysical Data Center (NGDC) is building high-resolution digital elevation models (DEMs) for select U.S. coastal regions. These integrated...

  1. 75 FR 11837 - Chesapeake Bay Watershed Initiative

    Science.gov (United States)

    2010-03-12

    ... Commodity Credit Corporation Chesapeake Bay Watershed Initiative AGENCY: Commodity Credit Corporation and... program funds for the Chesapeake Bay Watershed Initiative. SUMMARY: The Commodity Credit Corporation (CCC... Watershed Initiative for agricultural producers in the Chesapeake Bay watershed in the States of...

  2. Modeling Fecal Indicator Bacteria Like Salt in Newport Bay

    Science.gov (United States)

    Ciglar, A. M.; Rippy, M.; Grant, S. B.

    2015-12-01

    Newport Bay is a harbor and estuary located in Orange County, CA that provides many water sports and recreational activities for millions of southern California residents and tourists. The aim of this study is to quickly assess exceedances of FIB in the Newport Bay which pose a health risk to recreational users. The ability to quickly assess water quality is made possible with an advection-diffusion mass transport model that uses easily measurable parameters such as volumetric flow rate from tributaries. Current FIB assessment methods for Newport Bay take a minimum of 24 hours to evaluate health risk by either culturing for FIB or running a more complex fluid dynamics model. By this time the FIB may have already reached the ocean outlet thus no longer posing a risk in the bay or recreationists may have already come in close contact with contaminated waters. The advection-diffusion model can process and disseminate health risk information within a few hours of flow rate measurements, minimizing time between an FIB exceedance and public awareness about the event. Data used to calibrate and validate the model was collected from January 2006 through February 2007. Salinity data was used for calibration and FIB data was used for validation. Both steady-state and transient conditions were assessed to determine if dry weather patterns can be simplified to the steady-state condition.

  3. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, RIVERSIDE COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  4. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, SISKIYOU COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  5. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, PLUMAS COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  6. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, NAPA COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  7. Foundering lithosphere imaged beneath the southern Sierra Nevada, California, USA.

    Science.gov (United States)

    Boyd, Oliver S; Jones, Craig H; Sheehan, Anne F

    2004-07-30

    Seismic tomography reveals garnet-rich crust and mantle lithosphere descending into the upper mantle beneath the southeastern Sierra Nevada. The descending lithosphere consists of two layers: an iron-rich eclogite above a magnesium-rich garnet peridotite. These results place descending eclogite above and east of high P wave speed material previously imaged beneath the southern Great Valley, suggesting a previously unsuspected coherence in the lithospheric removal process. PMID:15286370

  8. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, NEVADA COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  9. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, SOLANO COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  10. Rockfall failure mechanisms in Yosemite Valley, California (USA)

    Science.gov (United States)

    Matasci, Battista; Guerin, Antoine; Carrea, Dario; Stock, Greg M.; Jaboyedoff, Michel; Collins, Brian

    2014-05-01

    Rockfall hazard is especially high in Yosemite Valley, with tens of rockfalls inventoried every year. A rockfall on 5 October 2013 from Ahwiyah Point consisted of a volume of 740 cubic meters and occurred within the perimeter of a larger event on 28 March 2009 that released 25'400 cubic meters of rock (Zimmer et al., 2012). In both events (2009 and 2013), the initial rockfall volumes dislodged a second one approximately equivalent in size by impacting the cliff below the source area during the fall. Rock fragments of up to several cubic meters were deposited on the talus slope, damaging a heavily used and recently reconstructed hiking path. We performed extensive mapping of structural features for several cliffs of Yosemite Valley to improve the assessment of the most susceptible rockfall areas. In particular we mapped and characterized the main brittle structures, the exfoliation joints and the failure mechanisms of the past rockfalls. Several failure mechanisms exist in Yosemite including the propagation of brittle structures that may lead to tensile, planar sliding, wedge sliding or toppling failures. Frequently, topographically-parallel exfoliation joints and topographically-oblique discontinuities coexist, resulting in complex failures. We also developed a methodology to examine how the distribution of joints within the cliff faces of Yosemite Valley affects overall stability with respect to the identified failure mechanisms. For these analyses, we used terrestrial laser scanning (TLS) to collect high resolution point clouds of the vertical and overhanging rock faces throughout the Valley. This provided the necessary 3D data to identify the main joint sets, perform spacing and trace length measurements, and calculate volumes of previous and potential rockfalls. We integrated this information with stability calculations to identify the likely failure mechanisms for each area of cliff and to obtain the number of potential failures per square meter of cliff face. The areas of a cliff with the highest number of potential failures per cliff surface are considered to be the most susceptible to rockfalls. We then compared these areas to field observations displaying the most visually unstable compartments by considering the following factors: 1) the compartment's degree of isolation due to bounding fractures, 2) the existence of basal steep, sliding prone discontinuities, 3) the opening of cracks, 4) the persistence of cracks, 5) the existence of overhangs, 6) the surrounding rockfall activity, 7) the water seepage along the limiting cracks, 8) the proximity to very fractured layers, 9) the proximity to geologic limits. Our preliminary results show a link between the type of failure mechanism, the persistence of discontinuities and the volume of analyzed rockfalls. Generally, planar or wedge sliding isolate larger unstable compartments compared to tensile failures along exfoliation joints.

  11. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, SIERRA COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  12. DIGITAL FLOOD INSURANCE RATE MAP DATABASE, BUTTE COUNTY, CALIFORNIA, USA

    Data.gov (United States)

    Federal Emergency Management Agency, Department of Homeland Security — The Digital Flood Insurance Rate Map (DFIRM) Database depicts flood risk information and supporting data used to develop the risk data. The primary risk...

  13. Pb Isotopes Track Asian Pollution in California

    Science.gov (United States)

    Ewing, S. A.; Christensen, J. N.; Brown, S. T.; Vancuren, R. A.; Cliff, S. S.; Depaolo, D. J.

    2008-12-01

    The transport of Asian pollution to North America has broad implications for global climate models and regional air quality regulation. In the western US, rising atmospheric Pb levels have been evident since the mid-1990s despite the phase-out of leaded gasoline. We use Pb isotopes to fingerprint the trans-Pacific component of atmospheric pollution in California. We measured Pb isotopes in airborne particles collected at two sites west (Mt. Tamalpais) and east (Chabot Observatory, Oakland Hills) of the San Francisco Bay Area, from winter 2007 through late spring 2008. We also analyzed archived springtime samples from inland sites throughout central California. Wintertime values of 206Pb/207Pb vs. 208Pb/207Pb at Chabot Observatory form a linear array that is consistent with published data for San Francisco Bay waters, whereas published values for Chinese cities and loess fall along a separate and distinct array for that region, consistent with our analysis of samples collected at Hefei, China in 2002. Between March and May 2008, the Tamalpais and Chabot samples diverge from the California regional array toward the Chinese array. About half of the central California samples also show a strong Asian influence. We quantify the divergence of values from the regional California array as Δ208Pb = (208Pb/207Pb)expected - (208Pb/207Pb) )observed, where (208Pb/207Pb)expected is derived from a linear fit to the wintertime samples at Chabot Observatory. These Δ208Pb values increase between winter and spring at both Mt. Tamapais and Chabot Observatory, and are higher at Mt. Tamalpais, despite lower Pb concentrations at that site. They indicate that up to 80% of the Pb in the Tamalpais samples, and up to 40% of the Pb in the Chabot Observatory samples, reflect trans-Pacific transport. The lower proportion in the Chabot samples -- where there is often more Pb -- indicates dilution by local urban sources. Our data provide conclusive evidence of Asian air pollution reaching

  14. The USA PATRIOT Act.

    Science.gov (United States)

    Minow, Mary; Coyle, Karen; Kaufman, Paula

    2002-01-01

    Explains the USA PATRIOT (Uniting and Strengthening America by Providing Appropriate Tools Required to Intercept and Obstruct Terrorism) Act, passed after the September 11 terrorist attacks, and its implications for libraries and patron records. Considers past dealings with the FBI; court orders; search warrants; wiretaps; and subpoenas. Includes:…

  15. Baltimaade kunsti turnee USAs

    Index Scriptorium Estoniae

    1998-01-01

    5. nov.-st USA Lõuna-Carolina osariigis Wellington B. Grey galeriis ja Jenkins Fine Art Center's 13 eesti, läti ja leedu kunstniku näitus, mis hakkab kolme aasta jooksul ringlema Ameerikas. Eksponeeritud fotokunst, video, installatsioon, joonistused. Kuraator Peeter Linnap ja Mari Laanemets peavad ettekande näituse avamisega samal ajal toimuval Fotohariduse Ühingu konverentsil

  16. Valitsus toetab USA kaitseinvesteeringuid

    Index Scriptorium Estoniae

    2015-01-01

    Valitsus kiitis heaks kokkuleppe, mis võimaldab USA relvajõududel kasutada kaitseväe valduses olevaid alasid ja ehitisi ning teha seal vajalikke ehitustöid. Kokkuleppe kohaselt võivad ameeriklased ehitustöid teha Ämari lennubaasis, keskpolügoonil ja Tapa linnakus

  17. Humic Substances from Manila Bay and Bolinao Bay Sediments

    Directory of Open Access Journals (Sweden)

    Elma Llaguno

    1997-12-01

    Full Text Available The C,H,N composition of sedimentary humic acids (HA extracted from three sites in Manila Bay and six sites in Bolinao Bay yielded H/C atomic ratios of 1.1-1.4 and N/C atomic ratios of 0.09 - 0.16. The Manila Bay HA's had lower H/C and N/C ratios compared to those from Bolinao Bay. The IR spectra showed prominent aliphatic C-H and amide I and II bands. Manila Bay HA's also had less diverse molecular composition based on the GC-MS analysis of the CuO and alkaline permanganate oxidation products of the humic acids.

  18. Guantanamo rikub USA seadusi / Krister Paris

    Index Scriptorium Estoniae

    Paris, Krister

    2003-01-01

    Kaks USA tsiviilkohut leiavad oma otsuses, et USA valitsus rikub USA-s ja Guantanamo sõjaväebaasis kinnipeetavate nn. vaenlasvõitlejate õigusi. Inimõigusorganisatsioonid avaldavad heameelt kohtute otsuste üle

  19. Environmental Impacts of a Major Freight Corridor: A study of the I-710 in California

    OpenAIRE

    Lee, Gunwoo; You, Soyoung Iris; Ritchie, Stephen G.; Saphores, Jean-Daniel M; Sangkapichai, Mana; Jayakrishnan, R.

    2008-01-01

    The San Pedro Bay Ports (SPBP) of Los Angeles and Long Beach in Southern California comprise one of the largest container port complexes in the world. The SPBP contribute significantly to both regional and national economies in California, and the US, respectively. However, the ongoing growth and economic benefits of the SPBP are threatened by negative externalities associated with port operations, particularly increasing congestion and air pollution. The objective of this paper is to explore...

  20. Histologic findings in free-ranging Sarasota Bay bottlenose dolphin (Tursiops truncatus) skin: mercury, selenium, and seasonal factors.

    Science.gov (United States)

    Miller, Debra L; Woshner, Victoria; Styer, Eloise L; Ferguson, Sylvia; Knott, Katrina K; Gray, Matthew J; Wells, Randall S; O'Hara, Todd M

    2011-10-01

    Full-thickness epidermal biopsy samples were collected from free-ranging common bottlenose dolphins (Tursiops truncatus) in Sarasota Bay, Florida, USA. Season (summer or winter) of collection, mercury (Hg) concentration, and selenium (Se) concentration were compared to histologic parameters. Epidermal Hg concentration was positively related to age (Pwinter (Pdolphin health need further investigation. PMID:22102676

  1. Bioinvasion in a Brazilian bay: filling gaps in the knowledge of southwestern Atlantic biota.

    Directory of Open Access Journals (Sweden)

    Barbara L Ignacio

    Full Text Available BACKGROUND: Biological invasions are a major cause of global species change. Nevertheless, knowledge about the distribution and ecology of introduced species is regionally biased, and many gaps in knowledge exist for most developing countries. METHODOLOGY/PRINCIPAL FINDINGS: To study the zoobenthos on the hard substratum of the Ilha Grande Bay, a survey was conducted on both natural and artificial substrata at three depths and seven sites. The species recorded were classified as native, cryptogenic or introduced. Multivariate analyses were conducted to assess the prevalence of introduced species in these communities and to compare the distribution of species on natural and artificial substrata of this bay to identify possible discrepancies in habitat use. Of the 61 species, 25 were cryptogenic, 10 were introduced and 26 were native. Similar numbers of introduced species were found on both natural and artificial substrata, though the community composition was significantly different between them. We also compared the species composition of the Ilha Grande Bay survey to other inventories taken around the world. The highest similarities were found between the Ilha Grande Bay inventory and the Atlantic coastal region (Tampa Bay, USA and the Gulf of Mexico, American Samoa and Pearl Harbor (USA inventories. CONCLUSIONS/SIGNIFICANCE: This study presents the first published comprehensive list of hard substratum sessile marine invertebrate species in a Brazilian bay. The high percentage of cryptogenic species reveals gaps in both zoological records and information on introduced species for the Brazilian coast. The introduced species successfully colonized different sites in the Ilha Grande Bay, including both natural and artificial substrata. In addition, we find that artificial structures may not be good surrogates for natural rocky shores and may represent an ecological threat. Comparisons with other inventories suggest a history of broad

  2. The impact of changing climate on phenology, productivity, and benthic-pelagic coupling in Narragansett Bay

    Science.gov (United States)

    Nixon, Scott W.; Fulweiler, Robinson W.; Buckley, Betty A.; Granger, Stephen L.; Nowicki, Barbara L.; Henry, Kelly M.

    2009-03-01

    The timing and magnitude of phytoplankton blooms have changed markedly in Narragansett Bay, RI (USA) over the last half century. The traditional winter-spring bloom has decreased or, in many years, disappeared. Relatively short, often intense, diatom blooms have become common in spring, summer, and fall replacing the summer flagellate blooms of the past. The annual and summer mean abundance (cell counts) and biomass (chl a) of phytoplankton appear to have decreased based on almost 50 years of biweekly monitoring by others at a mid bay station. These changes have been related to warming of the water, especially during winter, and to increased cloudiness. A significant decline in the winter wind speed may also have played a role. The changes in the phenology of the phytoplankton and the oligotrophication of the bay appear to have decreased greatly the quantity and (perhaps) quality of the organic matter being deposited on the bottom of the bay. This decline has resulted in a very much reduced benthic metabolism as reflected in oxygen uptake, nutrient regeneration, and the magnitude and direction of the net flux of N 2 gas. Based on many decades of standard weekly trawls carried out by the Graduate School of Oceanography, the winter biomass of bottom feeding epibenthic animals has also declined sharply at the mid bay station. After decades of relatively constant anthropogenic nitrogen loading (and declining phosphorus loading), the fertilization of the bay will soon be reduced during May-October due to implementation of advanced wastewater treatment. This is intended to produce an oligotrophication of the urban Providence River estuary and the Upper Bay. The anticipated decline in the productivity of the upper bay region will probably decrease summer hypoxia in that area. However, it may have unanticipated consequences for secondary production in the mid and lower bay where climate-induced oligotrophication has already much weakened the historically strong benthic

  3. H10303: NOS Hydrographic Survey , Suisan Bay, Honker Bay, California, 1989-07-05

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The National Oceanic and Atmospheric Administration (NOAA) has the statutory mandate to collect hydrographic data in support of nautical chart compilation for safe...

  4. H10306: NOS Hydrographic Survey , Suisan Bay, Honker Bay, California, 1989-09-06

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The National Oceanic and Atmospheric Administration (NOAA) has the statutory mandate to collect hydrographic data in support of nautical chart compilation for safe...

  5. Bayes Multiple Decision Functions

    CERN Document Server

    Wu, Wensong

    2011-01-01

    This paper deals with the problem of simultaneously making many (M) binary decisions based on one realization of a random data matrix X. M is typically large and X will usually have M rows associated with each of the M decisions to make, but for each row the data may be low dimensional. A Bayesian decision-theoretic approach for this problem is implemented with the overall loss function being a cost-weighted linear combination of Type I and Type II loss functions. The class of loss functions considered allows for the use of the false discovery rate (FDR), false nondiscovery rate (FNR), and missed discovery rate (MDR) in assessing the decision. Through this Bayesian paradigm, the Bayes multiple decision function (BMDF) is derived and an efficient algorithm to obtain the optimal Bayes action is described. In contrast to many works in the literature where the rows of the matrix X are assumed to be stochastically independent, we allow in this paper a dependent data structure with the associations obtained through...

  6. 33 CFR 165.1197 - Security Zones; San Francisco Bay, San Pablo Bay, Carquinez Strait, Suisun Bay, California.

    Science.gov (United States)

    2010-07-01

    ... REGULATED NAVIGATION AREAS AND LIMITED ACCESS AREAS Specific Regulated Navigation Areas and Limited Access... or on VHF-FM channel 16 (156.8 MHz) to seek permission to transit the area. If permission is...

  7. Teale California shoreline

    Data.gov (United States)

    California Department of Resources — California Spatial Information System (CaSIL) is a project designed to improve access to geo-spatial and geo-spatial related data information throughout the state...

  8. California Condor Critical Habitat

    Data.gov (United States)

    California Department of Resources — These Data identify (in general) the areas where critical habitat for the California Condor occur. Critical habitat for the species consists of the following 10...

  9. San Francisco Bay Sand Mining Resource Evaluation and Impact Analysis

    Science.gov (United States)

    Fenical, S.; Tirindelli, M.; Sicular, D.; Gragg, J.; Huitt, C.

    2012-12-01

    This paper presents results of the evaluation of potential future sand resources within certain Central San Francisco Bay (Central Bay) sand mining lease areas, as well as the potential impacts of further mining these areas for a ten-year period. The study consisted of morphological analysis using field measurements and hydrodynamic modeling, and covered a wide spectrum of physical processes including tidal and river circulation, salinity, sediment transport, and morphology. The study was conducted within the framework of an Environmental Impact Report (EIR) prepared by the California State Lands Commission (CSLC) as part of the discretionary approval process for issuing new mining leases. The results of the morphological analysis indicate a measurable depletion of sand resources in the Central Bay lease areas during the period 1997-2008, and that for the purposes of the proposed ten-year mining lease renewal, sand mining resources in Central Bay are largely limited to material already in place. The morphological analysis results also indicate that the proposed additional ten years of sand mining in the Central Bay lease areas are not likely to cause a significant impact on sediment transport and budgets in areas outside the vicinity of the lease areas, such as the San Francisco Bar, Ocean Beach, etc. Numerical modeling results, including particle tracking exercises, do indicate a net seaward transport of sand, and that a linkage exists between the mining areas and offshore areas (San Francisco Bar, Ocean Beach, etc). However, the modeling results demonstrate that the linkage is weak, and that any measurable changes in hydrodynamics, salinity and sediment transport/morphology caused by the mining activities are likely to be confined to the vicinity of the mining areas.

  10. 78 FR 25304 - Siemens Medical Solutions, USA, Inc., Oncology Care Systems (Radiation Oncology), Including On...

    Science.gov (United States)

    2013-04-30

    ... services. The notice was published in the Federal Register on April 18, 2012 (75 FR 23289). At the request... Employment and Training Administration Siemens Medical Solutions, USA, Inc., Oncology Care Systems (Radiation Oncology), Including On-Site Leased Workers From Source Right Solutions, Concord, California, Now...

  11. USA-USSR protocol

    CERN Multimedia

    1970-01-01

    On 30 November the USA Atomic Energy Commission and the USSR State Committee for the Utilization of Atomic Energy signed, in Washington, a protocol 'on carrying out of joint projects in the field of high energy physics at the accelerators of the National Accelerator Laboratory (Batavia) and the Institute for High Energy Physics (Serpukhov)'. The protocol will be in force for five years and can be extended by mutual agreement.

  12. 78 FR 1760 - Determination of Attainment for the San Francisco Bay Area Nonattainment Area for the 2006 Fine...

    Science.gov (United States)

    2013-01-09

    ... the 2006 Fine Particle Standard; California; Determination Regarding Applicability of Clean Air Act... 2006 24-hour fine particle (PM 2.5 ) National Ambient Air Quality Standard (NAAQS). This determination... Action On October 29, 2012 (77 FR 65521), EPA proposed to determine that the San Francisco Bay...

  13. A comparison of tectonic ambient shear stress value in China with that in western USA

    Institute of Scientific and Technical Information of China (English)

    陈培善; 白彤霞; 李保昆

    2002-01-01

    A method is proposed to estimate average tectonic ambient shear stress value for a region. Thus the average stress values of 19 regions in western USA, and 43 regions (each region is 10((10() in Chinese mainland and its surroundings have been obtained. The data of 15 993 earthquakes are from the Internet Centroid Moment Tensor solution made by Harvard University from 1997 to 1999. The results demonstrate that there are highest average stress values in the regions of south California of USA and its off coast sea, reach to 12.0 MPa and 13.7 MPa respectively, then gradually decrease toward north, south, and east. The lowest value is 8.7 MPa and 63% of highest value. The average stress values in northern Xinjiang and in the Chayu region of Tibet are 17.2 and 12.9 MPa respectively. They are highest values in China and higher than USA(s. The average stress value in North China, Yunnan, Sichuan, Taiwan is similar to south California of USA. The average stress value in South-North seismic zone is about 13 MPa, a little higher than south California. The distribution of average stress value for two important regions provides basic data for geology. These results are useful to research earthquake activity background and attenuation relation of strong ground motion parameters (e.g. peak acceleration and response spectra).

  14. Island Bay Wilderness study area : Island Bay National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This document is a brief report on a wilderness study area located in the Island Bay National Wildlife Refuge. It discusses the history of the study area, its...

  15. Dynamics of photosynthetic photon flux density (PPFD) and estimates in coastal northern California

    Science.gov (United States)

    The seasonal trends and diurnal patterns of Photosynthetically Active Radiation (PAR) were investigated in the San Francisco Bay Area of Northern California from March through August in 2007 and 2008. During these periods, the daily values of PAR flux density (PFD), energy loading with PAR (PARE), a...

  16. A Water Quality Study: Heron's Head Park, San Francisco, California

    Science.gov (United States)

    Li, A.; Wu, K.; Neiss, J.

    2007-12-01

    Heron's Head Park, formerly known as Pier 98, is a 24-acre restored wetland, owned and operated by the Port of San Francisco and situated at the base of the Hunter's Point Power Plant. Heron's Head is a unique environment that is built on landfill and is now a thriving marsh maintained primarily by youth and community volunteers. Adjacent to the park stands a PG&E power plant (closed May 2006), a county waste transfer station, and a combined sewer overflow (CSO) pipe. The park is bordered by San Francisco Bay on the north, east and south sides of the park. We examined the levels of ammonia, nitrite, nitrate, phosphate and fecal coliform at nine sites around the park. Utilizing historical data from other San Francisco Bay sites and other similar estuarine settings in California, we assessed the health of the Bay waters surrounding the park. We found the levels of ammonia, nitrate, nitrite and phosphates to be within the parameters of historical San Francisco Bay data and similar to settings such as Elkhorn Slough, Tomales Bay and Tijuana Estuary. In our study we did find a potential hazard to human health. Fecal coliform concentrations in waters that border the park range from 340 MPN/100 mL - 24,000 MPN/100 mL. This level significantly exceeds Environmental Protection Agency recommendations of 300 MPN/100 mL for human contact with water.

  17. Lavaca Bay 1985-1987

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Samples were collected from October 15, 1985 through June 12, 1987 in emergent marsh and non-vegetated habitats throughout the Lavaca Bay system to characterize...

  18. FL BAY SPECTROUT-DIET

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Juvenile spotted seatrout and other sportfish are being monitored annually over a 6-mo period in Florida Bay to assess their abundance over time relative to...

  19. Identifying Phytoplankton Classes In California Reservoirs Using HPLC Pigment Analysis

    Science.gov (United States)

    Siddiqui, S.; Peacock, M. B.; Kudela, R. M.; Negrey, K.

    2014-12-01

    Few bodies of water are routinely monitored for phytoplankton composition due to monetary and time constraints, especially the less accessible bodies of water in central and southern California. These lakes and estuaries are important for economic reasons such as tourism and fishing. This project investigated the composition of phytoplankton present using pigment analysis to identify dominant phytoplankton groups. A total of 28 different sites with a wide range of salinity (0 - 60) in central and southern California were examined. These included 13 different bodies of water in central California: 6 in the Sierras, 7 in the San Francisco Bay Estuary, and 15 from southern California. The samples were analyzed using high-performance liquid-chromatography (HPLC) to quantify the pigments present (using retention time and the spectral thumbprint). Diagnostic pigments were used to indicate the phytoplankton class composition, focusing on diatoms, dinoflagellates, cryptophytes, and cyanobacteria - all key phytoplankton groups indicative of the health of the sampled reservoir. Our results indicated that cyanobacteria dominated four of the seven bodies of central California water (Mono Lake, Bridgeport Reservoir, Steamboat Slough, and Pinto Lake); cryptophytes and nannoflagellates dominated two of the central California bodies of water (Mare Island Strait and Topaz Lake); and diatoms and dinoflagellates dominated one central California body of water, Oakland Inner Harbor, comprising more than 70% of the phytoplankton present. We expect the bodies of water from Southern California to be as disparate. Though this data is only a snapshot, it has significant implications in comparing different ecosystems across California, and it has the potential to provide valuable insight into the composition of phytoplankton communities.

  20. Macrofaunal Succession and Community Structure in Salicornia Marshes of Southern California

    Science.gov (United States)

    Talley, T. S.; Levin, L. A.

    1999-11-01

    Lack of basic understanding of ecosystem structure and function forms a major impediment to successful conservation of coastal ecosystems. This paper provides a description of the fauna and examines faunal succession in Salicornia -vegetated sediments of southern California. Environmental attributes (vegetation and sediment properties) and macrofaunal (animals ≥0·3 mm) community structure were examined in sediments of five natural, southern California Salicornia spp. marshes (Tijuana Estuary, San Diego Bay, Mission Bay, Upper Newport Bay and Anaheim Bay) and in created Salicornia marshes 16 months to 10 years in age, located within four of the bays. Oligochaetes and insects were the dominant taxa in both natural (71 to 98% of total fauna) and created (91 to 97%) marshes. In San Diego, Newport and Anaheim Bays, macrofaunal densities were generally higher in the created marshes (88 000 to 290 000 ind m -2) than in their natural counterparts (26 000 to 50 000 ind m -2). In the youngest system, Mission Bay, the reverse was true (natural: 113 000 vs created: 28 000 ind m -2). Similar species numbers were recorded from the created and adjacent natural marshes. Insects, especially chironomids, dolichopodids, and heleids, as well as the naidid oligochaete, Paranais litoralis, characterize early successional stages. Enchytraeid and tubificid oligochaetes reflect later succession evident in natural and older created marshes. Sediment organic matter (both combustible and below-ground plant biomass) was the environmental variable most commonly associated with densities of various macrofaunal taxa. These relationships were generally negative in the natural marshes and positive in the created marshes. Within-bay comparisons of macrofauna from natural Salicornia- vs Spartina -vegetated habitat in San Diego and Mission Bays revealed lower macrofaunal density (San Diego Bay only), proportionally fewer oligochaetes and more insects, and no differences in species richness in the

  1. Self-Nonself Recognition in the Colonial Protochordate Botryllus schlosseri from Mutsu Bay, Japan

    OpenAIRE

    Rinkevich, Baruch; Saito, Yasunori

    1992-01-01

    Wild Botryllus schlosseri collected from a 5 × 5 m area in Mutsu Bay (Aomori Prefecture, Japan) were tested for alloresponses in intrapopulation colony allorecognition assays (CAAs). Results indicate that rejection patterns are similar to those recorded previously in the populations from Monterey and Santa Barbara, California, from the Mediterranean coast of Israel, and from the Venetian lagoon, Italy. The only difference was the marked accumulation of bright-yellow blood cells in the tips of...

  2. A Space for Living: Region and Nature in the Bay Area, 1939-1969

    OpenAIRE

    Allen, Peter Albert

    2009-01-01

    In the decades around World War II, the San Francisco Bay Area in Northern California rapidly evolved into a more complex urban region. A diverse group of architects, landscape architects, and urban planners recognized the social and environmental issues inherent in this regional city. Their vision to combine modernist design with regional inspirations from nature, enacted at the regional scale, gave birth to an "arc of regional modernism" in mid-century American urbanism and architecture. T...

  3. Escape to Alcatraz: evolutionary history of slender salamanders (Batrachoseps) on the islands of San Francisco Bay

    OpenAIRE

    Martínez-Solano Iñigo; Lawson Robin

    2009-01-01

    Abstract Background Island populations are excellent model systems for studies of phenotypic, ecological and molecular evolution. In this study, molecular markers of mitochondrial and nuclear derivation were used to investigate the evolution, structure and origin of populations of the California slender salamander (Batrachoseps attenuatus) inhabiting the six major islands of San Francisco Bay, formed following the rising of sea level around 9,000 years ago. Results There was a high degree of ...

  4. Transforming the energy efficiency market in California: Key findings, lessons learned and future directions from California's market effects studies

    International Nuclear Information System (INIS)

    In the last three years, the California Institute for Energy and Environment (CIEE), along with the California Public Utilities Commission (CPUC), managed three market effects studies that were funded by the CPUC. This paper summarizes the key findings from these studies that focused on compact fluorescent lamps (CFLs), residential new construction (RNC), and high bay lighting (HBL), with a particular focus on changes to California's market effects evaluation protocol and lessons learned during the evaluation of market effects. This paper also summarizes the key results from a survey that was conducted by CIEE in February 2011 to determine what additional studies should be conducted in the evaluation of market effects. - Highlights: • We summarize three market effects studies and provide lessons learned. • Collect baseline market data as early as possible and throughout program lifecycle. • Estimate market effects throughout a program's lifecycle. • Require hypothesis testing as part of the evaluation. • Include elements of market effects evaluation in other program evaluations

  5. Domoic acid production near California coastal upwelling zones, June 1998

    Energy Technology Data Exchange (ETDEWEB)

    Trainer, V L.(National Marine Fisheries Service); Adams, Nicolaus G.(National Marine Fisheries Service); Bill, Brian D.(National Marine Fisheries Service); Stehr, Carla M.(National Marine Fisheries Service); Wekell, John C.(National Marine Fisheries Service); Moeller, Peter (National Ocean Service, Marine Biotoxins Program); Busman, Mark (National Ocean Service, Marine Biotoxins Program); Woodruff, Dana L.(BATTELLE (PACIFIC NW LAB))

    2000-01-01

    Sea lion mortalities in central California during May and June 1998 were traced to their ingestion of sardines and anchovies that had accumulated the neurotoxin domoic acid. The detection of toxin in urine, feces, and stomach contents of several sea lions represents the first proven occurrence of domoic acid transfer through the food chain to a marine mammal. The pennate diatoms, Pseudo-nitzschia multiseries and P. australis, were the dominant, toxin-producing phytoplankton constituting algal blooms near Monterey Bay, Half Moon Bay, and Oceano Dunes, areas where sea lions with neurological symptoms stranded. Toxic Pseudo-nitzschia were also found near Morrow Bay, Point Conception, Point Arguello, and Santa Barbara, demonstrating that these species were widespread along the central California coast in June 1998. Measurements of domoic acid during three cruises in early June showed the highest cellular toxin levels in P. multiseries near Point A?o Nuevo and in P. australis from Morro w Bay. Maximum cellular domoic acid levels were observed within 20 km of the coast between 0 and 5 m depth, although toxin was also measured to depths of 40 m. Hydrographic data indicated that the highest toxin levels and greatest numbers of toxic cells were positioned in water masses associated with upwelling zones near coastal headlands. Nutrient levels at these sites were less than those typically measured during periods of active upwelling, due to the 1998 El Ni?o event. The flow of cells and/or nutrients from coastal headlands into embayments where cells can multiply in a stratified environment is a possible mechanism of bloom development along the central California coast. This coupling of toxic Pseudo-nitzschia growth near upwelling zones with physical processes involved in cell transport will be understood only when long-term measurements are made at several key coastal locations, aiding in our capability to predict domoic-acid producing algal blooms.

  6. Tšarterkool USA-s / Johannes Kiersch

    Index Scriptorium Estoniae

    Kiersch, Johannes

    2001-01-01

    24.-27. mainì 01 toimub Tallinnas EFFE 2001 (European Forum of Freedom in Education) konverents "Haridus tänases kodanikuühiskonnas." Konverentsil esineb ka Witteni Waldorf-pedagoogika Instituudi õppejõud Johannes Kiersch. Lähemalt tema artiklist USA-s populaarsust võitvate tsharterkoolide kohta, mis on riigi- ja erakooli vahevorm

  7. Tsunami Inundation modeling for Tolaga Bay, Tokomaru Bay, Hicks Bay and Te Araroa communities

    Science.gov (United States)

    Barberopoulou, A.; Wang, X.; Power, W. L.

    2012-12-01

    We assess the tsunami hazard to four communities in Raukumara Peninsula (Northeastern region of North Island of New Zealand): Tokomaru Bay, Tolaga Bay, Hicks Bay and Te Araroa. Representative severe but realistic scenarios that could affect the Raukumara peninsula are earthquakes that rupture the interface between the Australian and Pacific plates, earthquakes that rupture faults within the overlying Australian plate or the subducting Pacific plate (location is not always well constrained). Earthquakes that rupture both the plate interface and simultaneously faults within the crust of the Australian plate are also a possibility. Tsunamis may also be caused by submarine landslides that occur near the edge of the continental shelf, but these are not considered here. For this study four scenario events were constructed, including a distant event from South America (offshore Peru), outer rise events and a thrust event in the Hikurangi region off the east coast of New Zealand. The sources are not exhaustive but representative of the types of significant events that could occur in the region and were either improved from earlier sources or derived from recent studies. Available high resolution LiDAR and RTK data were combined with topographic and LINZ data for the development of bathymetric/topographic grids. Our modelling results show that Tolaga Bay appears most vulnerable to tsunami inundation although Hicks Bay and Te Araroa are also significantly inundated in several of the scenarios. Tokomaru Bay is naturally well protected because the rapid change in elevation limits the range of inundation. The worst scenario for Tokomaru Bay was an earthquake in the Hikurangi subduction zone resulting in large flow depths, whereas for Tolaga Bay inundation is severe from most scenarios. Hicks Bay and Te Araroa get the most severe flooding from earthquakes in South America and on the Hikurangi subduction zone. Inundation extent is similar for Tolaga Bay during the Outer Rise and

  8. Atmospheric deposition fluxes to Monetary Bay

    Science.gov (United States)

    Gray, E.; Paytan, A.; Ryan, J.

    2008-12-01

    Atmospheric deposition has been widely recognized as a source of pollutants and nutrients to coastal ecosystems. Specifically, deposition includes nitrogen compounds, sulfur compounds, mercury, pesticides, phosphate, trace metals and other toxic compounds that can travel great distances. Sources of these components include both natural (volcanoes, mineral dust, forest fires) and anthropogenic (fossil fuels, chemical byproducts, incineration of waste) sources, which may contribute to harmful health and environmental impacts such as eutrophication, contaminated fish and harmful algal blooms. This study looks at the flux of aerosol deposition (TSP - total suspended particle load) to Monterey Bay, California. Samples are collected on a cascade impactor aerosol sampler (size fractions PM 2.5 and PM 10) every 48 hours continuously. Preliminary results indicate that the TSP for PM 10 ranged from 0.026 to 0.104 mg m-3 of air and for PM 2.5 from 0.014 to 0.046 mg m-3 of air. Using a deposition velocity of 2 cm s-1 for the large fraction (PM10 - PM 2.5) and a deposition velocity of 0.7 cm s-1 for the fine fraction (PM 2.5) deposition rates are 13 and 86 mg m-2 d-1 respectively.

  9. Reemerging Leptospirosis, California

    OpenAIRE

    Meites, Elissa; Jay, Michele T.; Deresinski, Stanley; Shieh, Wun-Ju; Zaki, Sherif R.; Tompkins, Lucy; Smith, D. Scott

    2004-01-01

    Leptospirosis is a reemerging infectious disease in California. Leptospirosis is the most widespread zoonosis throughout the world, though it is infrequently diagnosed in the continental United States. From 1982 to 2001, most reported California cases occurred in previously healthy young adult white men after recreational exposures to contaminated freshwater. We report five recent cases of human leptospirosis acquired in California, including the first documented common-source outbreak of hum...

  10. Effects of waves on water dispersion in a semi-enclosed estuarine bay

    Science.gov (United States)

    Delpey, M. T.; Ardhuin, F.; Otheguy, P.

    2012-04-01

    The bay of Saint Jean de Luz - Ciboure is a touristic destination located in the south west of France on the Basque coast. This small bay is 1.5km wide for 1km long. It is semi-enclosed by breakwaters, so that the area is mostly protected from waves except in its eastern part, where wave breaking is regularly observed over a shallow rock shelf. In the rest of the area the currents are generally weak. The bay receives fresh water inflows from two rivers. During intense raining events, the rivers can introduce pollutants in the bay. The input of pollutants combined with the low level dynamic of the area can affect the water quality for several days. To study such a phenomenon, mechanisms of water dispersion in the bay are investigated. The present paper focuses on the effects of waves on bay dynamics. Several field experiments were conducted in the area, combining wave and current measurements from a set of ADCP and ADV, lagrangian difter experiments in the surfzone, salinity and temperature profile measurements. An analysis of this set of various data is provided. It reveals that the bay combines remarkable density stratification due to fresh water inflows and occasionally intense wave-induced currents in the surfzone. These currents have a strong influence on river plume dynamics when the sea state is energetic. Moreover, modifications of hydrodynamics in the bay passes are found to be remarkably correlated with sea state evolutions. This result suggests a significant impact of waves on the bay flushing. To further analyse these phenomena, a three dimensional numerical model of bay hydrodynamics is developed. The model aims at reproducing fresh water inflows combined with wind-, tide- and wave-induced currents and mixing. The model of the bay is implemented using the code MOHID , which has been modified to allow the three dimensional representation of wave-current interactions proposed by Ardhuin et al. [2008b] . The circulation is forced by the wave field modelled

  11. Go.USA.gov URL Shortner API

    Data.gov (United States)

    General Services Administration — The Go.USA.gov REST API allows you interact with Go.USA.gov by shortening URLs, previewing long urls, and getting the number of clicks to a Go.USA.gov URL.. An API...

  12. California's congestion management program

    International Nuclear Information System (INIS)

    One of the hottest topics in transportation planning today is California's Congestion Management Program (CMP). California's program has been suggested as a model to the rest of the United States for addressing transportation problems and for conforming to the federal Clean Air Act. This article introduces California's Congestion Management Program, describes some problems related to California's CMP legislation, outlines the major CMP elements, and briefly explains the issue of the environmental impact of CMPs. This information might assist others in developing their own CMP programs

  13. Euroopa teadis USA salavanglaist / Tõnis Erilaid

    Index Scriptorium Estoniae

    Erilaid, Tõnis, 1943-

    2005-01-01

    USA endise välisministri Colin Powelli sõnul pole see tema sõpradele Euroopas uudiseks, et USA on viinud vange riikidesse, kus tema seadused ei kehti. USA praeguse välisministri Condoleezza Rice'i sõnul on USA vange üle kuulanud väljaspool USA-d. USA Today kirjeldab Stare Kiejkuty küla Poolas, kus arvatavasti on olnud salavangla

  14. Understanding the Flushing Capability of Bellingham Bay and Its Implication on Bottom Water Hypoxia

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Taiping; Yang, Zhaoqing

    2015-05-05

    In this study, an unstructured-grid finite-volume coastal ocean model (FVCOM) was used to simulate hydrodynamic circulation and assess the flushing capability in Bellingham Bay, Washington, USA. The model was reasonably calibrated against field observations for water level, velocity and salinity, and was further used to calculate residence time distributions in the study site. The model results suggest that, despite the large tidal ranges (~4 m during spring tide), tidal currents are relatively weak in Bellingham Bay with surface currents generally below 0.5 m/s. The local residence time in Bellingham Bay varies from to near zero to as long as 15 days, depending on the location and river flow condition. In general, Bellingham Bay is a well-flushed coastal embayment affected by freshwater discharge, tides, wind, and density-driven circulation. The basin-wide global residence time ranges from 5-7 days. The model results also provide useful information on possible causes of the emerging summertime hypoxia problem in the north central region of Bellingham Bay. It was concluded that the formation of the bottom hypoxic water should result from the increased consumption rate of oxygen in the bottom oceanic inflow with low dissolved oxygen by organic matters accumulated at the regions characterized with relatively long residence time in summer months.

  15. Derivation of habitat-specific dissolved oxygen criteria for Chesapeake Bay and its tidal tributaries

    Science.gov (United States)

    Batiuk, R.A.; Breitburg, D.L.; Diaz, R.J.; Cronin, T. M.; Secor, D.H.; Thursby, G.

    2009-01-01

    The Chesapeake 2000 Agreement committed its state and federal signatories to "define the water quality conditions necessary to protect aquatic living resources" in the Chesapeake Bay (USA) and its tidal tributaries. Hypoxia is one of the key water quality issues addressed as a result of the above Agreement. This paper summarizes the protection goals and specific criteria intended to achieve those goals for addressing hypoxia. The criteria take into account the variety of Bay habitats and the tendency towards low dissolved oxygen in some areas of the Bay. Stressful dissolved oxygen conditions were characterized for a diverse array of living resources of the Chesapeake Bay by different aquatic habitats: migratory fish spawning and nursery, shallow-water, open-water, deep-water, and deep-channel. The dissolved oxygen criteria derived for each of these habitats are intended to protect against adverse effects on survival, growth, reproduction and behavior. The criteria accommodate both spatial and temporal aspects of low oxygen events, and have been adopted into the Chesapeake Bay states - Maryland, Virginia, and Delaware - and the District of Columbia's water quality standards regulations. These criteria, now in the form of state regulatory standards, are driving an array of land-based and wastewater pollution reduction actions across the six-watershed.

  16. Understanding the flushing capability of Bellingham Bay and its implication on bottom water hypoxia

    Science.gov (United States)

    Wang, Taiping; Yang, Zhaoqing

    2015-11-01

    In this study, an unstructured-grid finite-volume coastal ocean model (FVCOM) was used to simulate hydrodynamic circulation and assess the flushing capability in Bellingham Bay, Washington, USA. The model was reasonably calibrated against field observations for water level, velocity and salinity, and was further used to calculate water residence time in the study site. The model results suggest that, despite the large tidal ranges (∼4 m during spring tide), tidal currents are relatively weak in Bellingham Bay with surface currents generally below 0.5 m/s. The local water residence time in Bellingham Bay varies from near zero to as long as 15 days, depending on the location and river flow conditions. In general, Bellingham Bay is a well-flushed coastal embayment affected by freshwater discharge, tides, wind, and density-driven circulation. The basin-wide global residence time ranges from 5 to 7 days. The model results also provide useful information on possible causes of the emerging summertime hypoxia problem in the north central region of Bellingham Bay. Model results suggest that the formation of hypoxia in bottom water results from an enhanced oxygen consumption rate in the oceanic bottom water inflow with low dissolved oxygen by organic matters accumulated at the regions characterized with relatively long residence time in summer months.

  17. Bayes linear statistics, theory & methods

    CERN Document Server

    Goldstein, Michael

    2007-01-01

    Bayesian methods combine information available from data with any prior information available from expert knowledge. The Bayes linear approach follows this path, offering a quantitative structure for expressing beliefs, and systematic methods for adjusting these beliefs, given observational data. The methodology differs from the full Bayesian methodology in that it establishes simpler approaches to belief specification and analysis based around expectation judgements. Bayes Linear Statistics presents an authoritative account of this approach, explaining the foundations, theory, methodology, and practicalities of this important field. The text provides a thorough coverage of Bayes linear analysis, from the development of the basic language to the collection of algebraic results needed for efficient implementation, with detailed practical examples. The book covers:The importance of partial prior specifications for complex problems where it is difficult to supply a meaningful full prior probability specification...

  18. With Prudhoe Bay in decline

    International Nuclear Information System (INIS)

    Almost every day, it seems, someone is mentioning Prudhoe Bay---its development activities, the direction of its oil production, and more recently its decline rate. Almost as frequently, someone is mentioning the number of companies abandoning exploration in Alaska. The state faces a double-edged dilemma: decline of its most important oil field and a diminished effort to find a replacement for the lost production. ARCO has seen the Prudhoe Bay decline coming for some time and has been planning for it. We have reduced staff, and ARCO and BP Exploration are finding cost-effective ways to work more closely together through such vehicles as shared services. At the same time, ARCO is continuing its high level of Alaskan exploration. This article will assess the future of Prudhoe Bay from a technical perspective, review ARCO's exploration plans for Alaska, and suggest what the state can do to encourage other companies to invest in this crucial producing region and exploratory frontier

  19. Distribution and behavior of major and trace elements in Tokyo Bay, Mutsu Bay and Funka Bay marine sediments

    Energy Technology Data Exchange (ETDEWEB)

    Honda, Teruyuki [Musashi Inst. of Technology, Atomic Energy Research Laboratory, Kawasaki, Kanagawa (Japan); Kimura, Ken-ichiro [Musashi Inst. of Technology, Graduate School, Research Division in Engineering, Kawasaki, Kanagawa (Japan)

    2003-06-01

    Fourteen major and trace elements in marine sediment core samples collected from the coasts along eastern Japan, i.e. Tokyo Bay (II) (the recess), Tokyo Bay (IV) (the mouth), Mutsu Bay and Funka Bay and the Northwest Pacific basin as a comparative subject were determined by the instrumental neutron activation analysis (INAA). The sedimentation rates and sedimentary ages were calculated for the coastal sediment cores by the {sup 210}Pb method. The results obtained in this study are summarized as follows: (1) Lanthanoid abundance patterns suggested that the major origin of the sediments was terrigenous material. La*/Lu* and Ce*/La* ratios revealed that the sediments from Tokyo Bay (II) and Mutsu Bay more directly reflected the contribution from river than those of other regions. In addition, the Th/Sc ratio indicated that the coastal sediments mainly originated in the materials from the volcanic island-arcs, Japanese islands, whereas those from the Northwest Pacific mainly from the continent. (2) The correlation between the Ce/U and Th/U ratios with high correlation coefficients of 0.920 to 0.991 indicated that all the sediments from Tokyo Bay (II) and Funka Bay were in reducing conditions while at least the upper sediments from Tokyo Bay (IV) and Mutsu Bay were in oxidizing conditions. (3) It became quite obvious that the sedimentation mechanism and the sedimentation environment at Tokyo Bay (II) was different from those at Tokyo Bay (IV), since the sedimentation rate at Tokyo Bay (II) was approximately twice as large as that at Tokyo Bay (IV). The sedimentary age of the 5th layer (8{approx}10 cm in depth) from Funka Bay was calculated at approximately 1940{approx}50, which agreed with the time, 1943{approx}45 when Showa-shinzan was formed by the eruption of the Usu volcano. (author)

  20. California's English Learner Students

    Science.gov (United States)

    Hill, Laura E.

    2012-01-01

    English Learner (EL) students in California's schools are numerous and diverse, and they lag behind their native-English-speaking peers. Closing the achievement gap for EL students has been a long-standing goal for California educators, and there are some signs of success. Now that EL funding and curriculum issues are receiving a fresh level of…