WorldWideScience

Sample records for basin fish habitat

  1. Grande Ronde Basin Fish Habitat Enhancement Project : 2007 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    McGowan, Vance R.; Morton, Winston H.

    2008-12-30

    On July 1, 1984 the Bonneville Power Administration and the Oregon Department of Fish and Wildlife entered into an intergovernmental contract to initiate fish habitat enhancement work in the Joseph Creek subbasin of the Grande Ronde River Basin in northeast Oregon. In 1985 the Upper and Middle Grande Ronde River, and Catherine Creek subbasins were included in the contract, and in 1996 the Wallowa River subbasin was added. The primary goal of 'The Grande Ronde Basin Fish Habitat Enhancement Project' is to create, protect, and restore riparian and instream habitat for anadromous salmonids, thereby maximizing opportunities for natural fish production within the basin. This project provided for implementation of Program Measure 703 (C)(1), Action Item 4.2 of the Northwest Power Planning Council's Columbia River Basin Fish and Wildlife Program (NPPC, 1987), and continues to be implemented as offsite mitigation for mainstem fishery losses caused by the Columbia River hydro-electric system. All work conducted by the Oregon Department of Fish and Wildlife and partners is on private lands and therefore requires that considerable time be spent developing rapport with landowners to gain acceptance of, and continued cooperation with this program throughout 10-15 year lease periods. Both passive and active restoration treatment techniques are used. Passive regeneration of habitat, using riparian exclosure fencing and alternate water sources are the primary method to restore degraded streams when restoration can be achieved primarily through changes in management. Active restoration techniques using plantings, bioengineering, site-specific instream structures, or whole stream channel alterations are utilized when streams are more severely degraded and not likely to recover in a reasonable timeframe. Individual projects contribute to and complement ecosystem and basin-wide watershed restoration efforts that are underway by state, federal, and tribal agencies, and

  2. CTUIR Umatilla Anadromous Fisheries Habitat Project : A Columbia River Basin Fish Habitat Project 2008 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Hoverson, Eric D.; Amonette, Alexandra

    2009-02-09

    The Umatilla Anadromous Fisheries Habitat Project (UAFHP) is an ongoing effort to protect, enhance, and restore riparian and instream habitat for the natural production of anadromous salmonids in the Umatilla River Basin, Northeast Oregon. Flow quantity, water temperature, passage, and lack of in-stream channel complexity have been identified as the key limiting factors in the basin. During the 2008 Fiscal Year (FY) reporting period (February 1, 2008-January 31, 2009) primary project activities focused on improving instream and riparian habitat complexity, migrational passage, and restoring natural channel morphology and floodplain function. Eight primary fisheries habitat enhancement projects were implemented on Meacham Creek, Birch Creek, West Birch Creek, McKay Creek, West Fork Spring Hollow, and the Umatilla River. Specific restoration actions included: (1) rectifying one fish passage barrier on West Birch Creek; (2) participating in six projects planting 10,000 trees and seeding 3225 pounds of native grasses; (3) donating 1000 ft of fencing and 1208 fence posts and associated hardware for 3.6 miles of livestock exclusion fencing projects in riparian areas of West Birch and Meacham Creek, and for tree screens to protect against beaver damage on West Fork Spring Hollow Creek; (4) using biological control (insects) to reduce noxious weeds on three treatment areas covering five acres on Meacham Creek; (5) planning activities for a levee setback project on Meacham Creek. We participated in additional secondary projects as opportunities arose. Baseline and ongoing monitoring and evaluation activities were also completed on major project areas such as conducting photo point monitoring strategies activities at the Meacham Creek Large Wood Implementation Project site (FY2006) and at additional easements and planned project sites. Fish surveys and aquatic habitat inventories were conducted at project sites prior to implementation. Proper selection and implementation of

  3. Grande Ronde Basin Fish Habitat Enhancement Project, Annual Report 2002-2003.

    Energy Technology Data Exchange (ETDEWEB)

    McGowan, Vance

    2003-08-01

    On July 1, 1984 the Bonneville Power Administration and the Oregon Department of Fish and Wildlife entered into an agreement to initiate fish habitat enhancement work in the Joseph Creek subbasin of the Grande Ronde River Basin in northeast Oregon. In July of 1985 the Upper and Middle Grande Ronde River, and Catherine Creek subbasins were included in the intergovernmental contract, and on March 1, 1996 the Wallowa River subbasin was added. The primary goal of 'The Grande Ronde Basin Fish Habitat Enhancement Project' is to create, protect, and restore riparian and instream habitat for anadromous salmonids, thereby maximizing opportunities for natural fish production within the basin. This project provided for implementation of Program Measure 703 (C)(1), Action Item 4.2 of the Northwest Power Planning Council's Columbia River Basin Fish and Wildlife Program (NPPC, 1987), and continues to be implemented as offsite mitigation for mainstem fishery losses caused by the Columbia River hydro-electric system. All work conducted by the Oregon Department of Fish and Wildlife is on private lands and therefore requires that considerable time be spent developing rapport with landowners to gain acceptance of, and continued cooperation with this program throughout 10-15 year lease periods. This project calls for passive regeneration of habitat, using riparian exclosure fencing as the primary method to restore degraded streams to a normative condition. Active remediation techniques using plantings, off-site water developments, site-specific instream structures, or whole channel alterations are also utilized where applicable. Individual projects contribute to and complement ecosystem and basin-wide watershed restoration efforts that are underway by state, federal, and tribal agencies, and local watershed councils. Work undertaken during 2002 included: (1) Implementing 1 new fencing project in the Wallowa subbasin that will protect an additional 0.95 miles of stream

  4. Umatilla River Basin Anadromous Fish Habitat Enhancement Project : 1993 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Shaw, R. Todd

    1993-04-01

    The Umatilla Basin Anadromous Fish Habitat Enhancement Project is funded under the Northwest Power Planning Council's Columbia River Basin Fish and Wildlife Program Measure 704 (d) (1) 34.02 and targets the improvement of water quality and restoration of riparian areas, holding, spawning and rearing habitats of steelhead, spring and fall chinook and coho salmon. The project focused on implementing instream and riparian habitat improvements on private lands on the Umatilla Indian Reservation (hereafter referred to as Reservation) from April 1, 1988 to March 31, 1992. These efforts resulted in enhancement of the lower 1/4 mile of Boston Canyon Creek, the lower 4 river miles of Meacham Creek and 3.2 river miles of the Umatilla River (downstream of the Meacham Creek confluence upstream to the Reservation East Boundary). In 1993, the project shifted emphasis to a comprehensive watershed approach consistent with other basin efforts and began to identify upland and riparian watershed-wide causative factors impacting fisheries habitat and natural fisheries production capabilities throughout the Umatilla River Watershed. Maintenance of existing habitat improvement projects was included under this comprehensive approach. Maintenance of existing gravel traps, instream and bank stabilization structures was required within project areas during the reporting period due to spring flooding damage and high bedload movement. Maintenance activities were completed between river mile (RM) 0.0 and RM 0.25 Boston Canyon Creek, between RM 0.0 and RM 4 Meacham Creek and between RM 78.5 and RM 79 Umatilla River. Habitat enhancement areas were seeded with native grass, legume, shrub and wildflower mixes and planted with willow cuttings to assist in floodplain recovery, stream channel stability and filtering of sediments during high flow periods. Water quality monitoring continued for temperature and turbidity throughout the upper Umatilla River Watershed. Survey of cross sections and

  5. Walla Walla River Basin Fish Habitat Enhancement Project, 2000-2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Volkman, Jed; Sexton, Amy D. (Confederated Tribes of the Umatilla Indian Reservation, Pendleton, OR)

    2001-01-01

    In 2000, the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) Fisheries Habitat Program implemented stream habitat restoration and protection efforts in the Walla Walla River Basin with funding from Bonneville Power Administration (BPA). The objective of these efforts is to protect and restore habitat critical to the recovery of weak or reintroduced populations of salmonid fish. Six projects, two on Couse Creek, two adjacent properties on Blue Creek, one on Patit Creek, and one property on the mainstem Walla Walla River were part of the exercise. Several thousand native plants as bare-root stock and cuttings were reintroduced to the sites and 18 acres of floodplain corridor was seeded with native grass seed. Pre and post-project monitoring efforts were included for all projects, incorporating methodologies from CTUIR's Draft Monitoring Plan.

  6. Umatilla River Basin Anadromous Fish Habitat Enhancement Project : 1995 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Shaw, R.Todd

    1996-05-01

    During the 1995 - 96 project period, four new habitat enhancement projects were implemented under the Umatilla River Basin Anadromous Fish Habitat Enhancement Project by the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) in the upper Umatilla River Basin. A total of 38,644 feet of high tensile smooth wire fencing was constructed along 3.6 miles of riparian corridor in the Meacham Creek, Wildhorse Creek, Greasewood Creek, West Fork of Greasewood Creek and Mission Creek watersheds. Additional enhancements on Wildhorse Creek and the lower Greasewood Creek System included: (1) installation of 0.43 miles of smooth wire between river mile (RM) 10.25 and RM 10.5 Wildhorse Creek (fence posts and structures had been previously placed on this property during the 1994 - 95 project period), (2) construction of 46 sediment retention structures in stream channels and maintenance to 18 existing sediment retention structures between RM 9.5 and RM 10.25 Wildhorse Creek, and (3) revegetation of stream corridor areas and adjacent terraces with 500 pounds of native grass seed or close species equivalents and 5,000 native riparian shrub/tree species to assist in floodplain recovery, stream channel stability and filtering of sediments during high flow periods. U.S. Fish and Wildlife Service (USFWS), Bureau of Indian Affairs (BIA) and Environmental Protection Agency (EPA) funds were cost shared with Bonneville Power Administration (BPA) funds, provided under this project, to accomplish habitat enhancements. Water quality monitoring continued and was expanded for temperature and turbidity throughout the upper Umatilla River Watershed. Physical habitat surveys were conducted on the lower 13 river miles of Wildhorse Creek and within the Greasewood Creek Project Area to characterize habitat quality and to quantify various habitat types by area.

  7. Umatilla River Basin Anadromus Fish Habitat Enhancement Project. 1994 Annual report

    International Nuclear Information System (INIS)

    The Umatilla Basin Anadromous Fish Habitat Enhancement Project targets the improvement of water quality and restoration of riparian areas, holding, spawning and rearing habitats of steelhead, spring and fall chinook and coho salmon. The project focused on implementing cooperative instream and riparian habitat improvements on private lands on the Umatilla Indian Reservation from April 1, 1988 to March 31, 1992. These efforts resulted in enhancement of the lower 1/4 mile of Boston Canyon Creek, the lower 4 river miles of Meacham Creek and 3.2 river miles of the Umatilla River in the vicinity of Gibbon, Oregon. In 1993, the project shifted emphasis to a comprehensive watershed approach, consistent with other basin efforts, and began to identify upland and riparian watershed-wide causative factors impacting fisheries habitat and natural fisheries production capabilities throughout the Umatilla River Watershed. During the 1994--95 project period, a one river mile demonstration project was implemented on two privately owned properties on Wildhorse Creek. This was the first watershed improvement project to be implemented by the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) off of the Reservation

  8. Walla Walla River Basin Fish Habitat Enhancement Project, 2001-2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Volkman, Jed; Sexton, Amy D. (Confederated Tribes of the Umatilla Indian Reservation, Pendleton, OR)

    2003-04-01

    In 2001, the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) Fisheries Habitat Program implemented stream habitat restoration and protection efforts in the Walla Walla River Basin with funding from Bonneville Power Administration (BPA). The objective of these efforts is to protect and restore habitat critical to the recovery of weak or reintroduced populations of salmonid fish. The CTUIR has currently enrolled six properties into this program: two on Couse Creek, two adjacent properties on Blue Creek, one on Patit Creek, and one property on the mainstem Walla Walla River. Since 1997, approximately 7 miles of critical salmonid habitat has been secured for restoration and protection under this project. Major accomplishments to date include the following: Secured approximately $250,000 in cost share; Secured 7 easements; Planted 30,000+ native plants; Installed 50,000+ cuttings; and Seeded 18 acres to native grass. Pre and post-project monitoring efforts were included for all projects, incorporating methodologies from CTUIR's Draft Monitoring Plan. Basin-wide monitoring also included the deployment of 6 thermographs to collect summer stream temperatures.

  9. John Day River Sub-Basin Fish Habitat Enhancement Project; 2008 Annual Report

    Energy Technology Data Exchange (ETDEWEB)

    Powell, Russ M.; Alley, Pamela D.; Goin Jr, Lonnie [Oregon Department of Fish and Wildlife

    2009-07-15

    Work undertaken in 2008 included: (1) Seven new fence projects were completed thereby protecting approximately 10.97 miles of streams with 16.34 miles of riparian fence; (2) Renewal of one expired lease was completed thereby continuing to protect 0.75 miles of stream with 1.0 mile of riparian fence. (3) Maintenance of all active project fences (106.54 miles), watergaps (78), spring developments (33) were checked and repairs performed; (3) Planted 1000 willow/red osier on Fox Creek/Henslee property; (4) Planted 2000 willows/red osier on Middle Fork John Day River/Coleman property; (5) Planted 1000 willow/red osier cuttings on Fox Creek/Johns property; (6) Since the initiation of the Fish Habitat Project in 1984 we have 126.86 miles of stream protected using 211.72 miles of fence protecting 5658 acres. The purpose of the John Day Fish Habitat Enhancement Program is to enhance production of indigenous wild stocks of spring Chinook and summer steelhead within the sub basin through habitat protection, enhancement and fish passage improvement. The John Day River system supports the largest remaining wild runs of spring chinook salmon and summer steelhead in Northeast Oregon.

  10. Walla Walla River Basin Fish Habitat Enhancement Project, 2002-2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Volkman, Jed (Confederated Tribes of the Umatilla Indian Reservation, Pendleton, OR)

    2005-12-01

    In 2002 and 2003, the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) Fisheries Habitat Program implemented stream habitat restoration and protection efforts on private properties in the Walla Walla River Basin with funding from Bonneville Power Administration (BPA). The objective of this effort is to protect and restore habitat critical to the recovery of weak or reintroduced populations of salmonid fish. The CTUIR has currently enrolled nine properties into this program: two on Couse Creek, two adjacent properties on Blue Creek, one on Patit Creek, and four properties on the mainstem Walla Walla River. Major accomplishments during the reporting period include the following: (1) Secured approximately $229,000 in project cost share; (2) Purchase of 46 acres on the mainstem Walla Walla River to be protected perpetually for native fish and wildlife; (3) Developed three new 15 year conservation easements with private landowners; (4) Installed 3000 feet of weed barrier tarp with new plantings within project area on the mainstem Walla Walla River; (5) Expanded easement area on Couse Creek to include an additional 0.5 miles of stream corridor and 32 acres of upland habitat; (6) Restored 12 acres on the mainstem Walla Walla River and 32 acres on Couse Creek to native perennial grasses; and (7) Installed 50,000+ new native plants/cuttings within project areas.

  11. Umatilla River Basin Anadromous Fish Habitat Enhancement Project : 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Shaw, R. Todd; Sexton, Amy D.

    2003-02-01

    The Umatilla River Basin Anadromous Fish Habitat Enhancement Project continued to identify impacted stream reaches throughout the Umatilla River Basin for habitat improvements during the 2001 project period. Public outreach efforts, biological and physical monitoring, and continued development of a Umatilla Subbasin Watershed Assessment assisted the project in fostering public cooperation, targeting habitat deficiencies and determining habitat recovery measures. Projects continued to be maintained on 49 private properties, one 25-year Non-Exclusive Bureau of Indian Affairs' Easement was secured, six new projects implemented and two existing project areas improved to enhance anadromous fish habitat. New project locations included sites on the mid Umatilla River, upper Umatilla River, Mission Creek, Cottonwood Creek and Buckaroo Creek. New enhancements included: (1) construction of 11,264 feet of fencing between River Mile 43.0 and 46.5 on the Umatilla River, (2) a stream bank stabilization project implemented at approximately River Mile 63.5 Umatilla River to stabilize 330 feet of eroding stream bank and improve instream habitat diversity, included construction of eight root wad revetments and three boulder J-vanes, (3) drilling a 358-foot well for off-stream livestock watering at approximately River Mile 46.0 Umatilla River, (4) installing a 50-foot bottomless arch replacement culvert at approximately River Mile 3.0 Mission Creek, (5) installing a Geoweb stream ford crossing on Mission Creek (6) installing a 22-foot bottomless arch culvert at approximately River Mile 0.5 Cottonwood Creek, and (7) providing fence materials for construction of 21,300 feet of livestock exclusion fencing in the Buckaroo Creek Drainage. An approximate total of 3,800 native willow cuttings and 350 pounds of native grass seed was planted at new upper Umatilla River, Mission Creek and Cottonwood Creek project sites. Habitat improvements implemented at existing project sites included

  12. Assessment of hydraulic fish habitat condition using integrated toolkit: a case study of the Geum river basin, Republic of Korea.

    Science.gov (United States)

    Park, Sangyoung; Kim, Jeongkon; Ko, Ick Hwan; Arthington, Angela; Jones, Gary; Yum, Kyung Taek

    2010-01-01

    Artificial changes of rivers, including construction and operation of dams, inevitably lead to physical and ecological changes throughout waterways and their floodplains. In this study, a conceptual model coupled with integrated numerical modeling is presented for hydraulic fish habitat assessment of the Geum River basin, Republic of Korea. Based on the major events which might have affected the ecological system, a conceptual model was formulated to guide desktop and field studies, modeling and scenario evaluations. The result of hydraulic fish habitat assessment indicated that the construction of the Daecheong Multipurpose Dam (DMD) in the Geum River basin has altered flow magnitudes and reduced the river's flow variability. Changes are evident in the magnitude of medium and small flows and the river experiences increased low flows during the dry season. Black shiner, an endangered fish species in Korea, was selected and analyzed to explore relationships between flow regime change by dams and changes to its preferred habitats. As a result, fewer sensitive riffle-benthic species were observed in the reaches downstream of DMD due to the reduction of suitable habitat conditions such as riffle-pool sequences. The proposed conceptual model and integrated toolkit would allow river managers to isolate the physical and biological effects associated with dam operation and could be useful for developing river management strategies.

  13. Fishes and aquatic habitats of the Orinoco River Basin: diversity and conservation.

    Science.gov (United States)

    Lasso, C A; Machado-Allison, A; Taphorn, D C

    2016-07-01

    About 1000 freshwater fishes have been found so far in the Orinoco River Basin of Venezuela and Colombia. This high ichthyological diversity reflects the wide range of landscapes and aquatic ecosystems included in the basin. Mountain streams descend from the high Andes to become rapid-flowing foothill rivers that burst out upon vast savannah flatlands where they slowly make their way to the sea. These white-water rivers are heavily laden with sediments from the geologically young Andes. Because their sediment deposits have formed the richest soils of the basin, they have attracted the highest density of human populations, along with the greatest levels of deforestation, wildfires, agricultural biocides and fertilizers, sewage and all the other impacts associated with urban centres, agriculture and cattle ranching. In the southern portion of the basin, human populations are much smaller, where often the only inhabitants are indigenous peoples. The ancient rocks and sands of the Guiana Shield yield clear and black water streams of very different quality. Here, sediment loads are miniscule, pH is very acid and fish biomass is only a fraction of that observed in the rich Andean tributaries to the north. For each region of the basin, the current state of knowledge about fish diversity is assessed, fish sampling density evaluated, the presence of endemic species and economically important species (for human consumption or ornamental purposes) described and gaps in knowledge are pointed out. Current trends in the fishery for human consumption are analysed, noting that stocks of many species are in steep decline, and that current fishing practices are not sustainable. Finally, the major impacts and threats faced by the fishes and aquatic ecosystems of the Orinoco River Basin are summarized, and the creation of bi-national commissions to promote standardized fishing laws in both countries is recommended. PMID:27250805

  14. Freshwater fish faunas, habitats and conservation challenges in the Caribbean river basins of north-western South America.

    Science.gov (United States)

    Jiménez-Segura, L F; Galvis-Vergara, G; Cala-Cala, P; García-Alzate, C A; López-Casas, S; Ríos-Pulgarín, M I; Arango, G A; Mancera-Rodríguez, N J; Gutiérrez-Bonilla, F; Álvarez-León, R

    2016-07-01

    The remarkable fish diversity in the Caribbean rivers of north-western South America evolved under the influences of the dramatic environmental changes of neogene northern South America, including the Quechua Orogeny and Pleistocene climate oscillations. Although this region is not the richest in South America, endemism is very high. Fish assemblage structure is unique to each of the four aquatic systems identified (rivers, streams, floodplain lakes and reservoirs) and community dynamics are highly synchronized with the mono-modal or bi-modal flooding pulse of the rainy seasons. The highly seasonal multispecies fishery is based on migratory species. Freshwater fish conservation is a challenge for Colombian environmental institutions because the Caribbean trans-Andean basins are the focus of the economic development of Colombian society, so management measures must be directed to protect aquatic habitat and their connectivity. These two management strategies are the only way for helping fish species conservation and sustainable fisheries. PMID:27401480

  15. Linking landscapes and habitat suitability scores for diadromous fish restoration in the susquehanna river basin

    Science.gov (United States)

    Kocovsky, P.M.; Ross, R.M.; Dropkin, D.S.; Campbell, J.M.

    2008-01-01

    Dams within the Susquehanna River drainage, Pennsylvania, are potential barriers to migration of diadromous fishes, and many are under consideration for removal to facilitate fish passage. To provide useful input for prioritizing dam removal, we examined relations between landscape-scale factors and habitat suitability indices (HSIs) for native diadromous species of the Susquehanna River. We used two different methods (U.S. Fish and Wildlife Service method: Stier and Crance [1985], Ross et al. [1993a, 1993b, 1997], and Pardue [1983]; Pennsylvania State University method: Carline et al. [1994]) to calculate HSIs for several life stages of American shad Alosa sapidissima, alewives Alosa pseudoharengus, and blueback herring Alosa aestivalis and a single HSI for American eels Anguilla rostrata based on habitat variables measured at transects spaced every 5 km on six major Susquehanna River tributaries. Using geographical information systems, we calculated land use and geologic variables upstream from each transect and associated those data with HSIs calculated at each transect. We then performed canonical correlation analysis to determine how HSIs were linked to geologic and land use factors. Canonical correlation analysis identified the proportion of watershed underlain by carbonate rock as a positive correlate of HSIs for all species and life stages except American eels and juvenile blueback herring. We hypothesize that potential mechanisms linking carbonate rock to habitat suitability include increased productivity and buffering capacity. No other consistent patterns of positive or negative correlation between landscape-scale factors and HSIs were evident. This analysis will be useful for prioritizing removal of dams in the Susquehanna River drainage, because it provides a broad perspective on relationships between habitat suitability for diadromous fishes and easily measured landscape factors. This approach can be applied elsewhere to elucidate relationships

  16. Field Review of Fish Habitat Improvement Projects in the Grande Ronde and John Day River Basins of Eastern Oregon.

    Energy Technology Data Exchange (ETDEWEB)

    Beschta, Robert L.; Platts, William S.; Kauffman, J. Boone

    1991-10-01

    The restoration of vegetation adapted to riparian environments and the natural succession of riparian plant communities is necessary to recreate sustainable salmonid habitat and should be the focal point for fish habitat improvement programs. In mid-August of 1991, a field review of 16 Salmon habitat improvement sites in the Grande Ronde and John Day River Basins in Eastern Oregon was undertaken. The review team visited various types of fish habitat improvements associated with a wide range of reach types, geology, channel gradients, stream sizes, and vegetation communities. Enhancement objectives, limiting factors, landuse history, and other factors were discussed at each site. This information, in conjunction with the reviewer's field inspection of portions of a particular habitat improvement project, provided the basis for the following report. This report that follows is divided into four sections: (1) Recommendations, (2) Objectives, (3) Discussion and Conclusions, and (4) Site Comments. The first section represents a synthesis of major recommendations that were developed during this review. The remaining sections provide more detailed information and comments related to specific aspects of the field review.

  17. Confederated Tribes Umatilla Indian Reservation (CTUIR) Umatilla Anadromous Fisheries Habitat Project : A Columbia River Basin Fish Habitat Project : Annual Report Fiscal Year 2007.

    Energy Technology Data Exchange (ETDEWEB)

    Hoverson, Eric D.; Amonette, Alexandra

    2008-12-02

    The Umatilla Anadromous Fisheries Habitat Project (UAFHP) is an ongoing effort to protect, enhance, and restore riparian and instream habitat for the natural production of anadromous salmonids in the Umatilla River Basin, Northeast Oregon. Flow quantity, water temperature, passage, and lack of in-stream channel complexity have been identified as the key limiting factors in the basin. During the 2007 Fiscal Year (FY) reporting period (February 1, 2007-January 31, 2008) primary project activities focused on improving instream and riparian habitat complexity, migrational passage, and restoring natural channel morphology and floodplain function. Eight fisheries habitat enhancement projects were implemented on Meacham Creek, Camp Creek, Greasewood Creek, Birch Creek, West Birch Creek, and the Umatilla River. Specific restoration actions included: (1) rectifying five fish passage barriers on four creeks, (2) planting 1,275 saplings and seeding 130 pounds of native grasses, (3) constructing two miles of riparian fencing for livestock exclusion, (4) coordinating activities related to the installation of two off-channel, solar-powered watering areas for livestock, and (5) developing eight water gap access sites to reduce impacts from livestock. Baseline and ongoing monitoring and evaluation activities were also completed on major project areas such as conducting photo point monitoring strategies activities at the Meacham Creek Large Wood Implementation Project site (FY2006) and at all existing easements and planned project sites. Fish surveys and aquatic habitat inventories were conducted at project sites prior to implementation. Monitoring plans will continue throughout the life of each project to oversee progression and inspire timely managerial actions. Twenty-seven conservation easements were maintained with 23 landowners. Permitting applications for planned project activities and biological opinions were written and approved. Project activities were based on a variety

  18. Fish Habitat Improvement Projects in the Fifteenmile Creek and Trout Creek Basins of Central Oregon: Field Review and Management Recommendations.

    Energy Technology Data Exchange (ETDEWEB)

    Kauffman, J. Boone

    1993-07-01

    A field review of stream habitat improvement project sites in the lower Deschutes River Basin was conducted by riparian ecology, fisheries, and hydrology specialists. Habitat management objectives, limiting factors, project implementation, land use history, and other factors were discussed at each site. This information, in conjunction with the reviewer`s field inspections of portions of a particular habitat project, provided the basis for this report.

  19. Hungry Horse Dam fisheries mitigation program: Fish passage and habitat improvement in the Upper Flathead River basin

    International Nuclear Information System (INIS)

    In the past 50 years, dramatic changes have occurred in the Flathead Lake and River system. Degradation of fishery resources has been evident, in part due to deterioration of aquatic habitat and introduction of non-endemic fish and invertebrate species. Habitat loss has been attributed to many factors including the construction and operation of Hungry Horse Dam, unsound land use practices, urban development, and other anthropogenic and natural disturbances. Fish migration has also been limited by barriers such as dams and impassible culverts. Cumulatively, these factors have contributed to declines in the distribution and abundance of native fish populations. Recovery of fish populations requires that a watershed approach be developed that incorporates long-term aquatic habitat needs and promotes sound land use practices and cooperation among natural resource management agencies. In this document, the authors (1) describe completed and ongoing habitat improvement and fish passage activities under the Hungry Horse Fisheries Mitigation Program, (2) describe recently identified projects that are in the planning stage, and (3) develop a framework for identifying prioritizing, implementing, and evaluating future fish habitat improvement and passage projects

  20. Fifteenmile Basin habitat enhancement project.; TOPICAL

    International Nuclear Information System (INIS)

    The Fifteenmile Basin Habitat Improvement Project is an ongoing multi-agency effort to improve habitat in the Fifteenmile drainage and increase production of the depressed wild, winter steelhead run. Cooperating agencies include the Oregon Department of Fish and Wildlife, USDA Forest Service. USDA Soil Conservation Service and Bonneville Power Administration. in consultation with the Confederated Tribes of Warm Springs. The Oregon Department of Fish and Wildlife is administering project work on state and private lands and the U.S.D.A. Forest Service is administering project work on National Forest land. Project work on the Forest has been sub-divided into four components; (1) Ramsey Creek, (2) Eightmile Creek, (3) Fifteenmile Creek, and (4) Fivemile Creek. Forest Service activities in the Fifteenmile basin during 1988 involved habitat improvement work on Ramsey Creek, continuation of physical and biological monitoring, collection of spawning survey information, and macroinvertebrate sampling. The primary project objective on Ramsey Creek was to increase juvenile rearing habitat for 1+ steelhead. A total of 48 log structures including sills, diggers, wings and diagonal series were constructed in two project areas

  1. Increased Levels of Harvest and Habitat Law Enforcement and Public Awareness for Anadromous Salmonids and Resident Fish in the Columbia River Basin -- Demonstration Period, 1992--1994, Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    NeSmith, Frank (Idaho Department of Fish and Game, Boise, ID); Long, Mack (Montana Department of Fish, Wildlife and Paks, Kalispell, MT); Matthews, Dayne (Washington Department of Fish and Wildlife, Olympia, WA)

    1995-06-01

    This report was funded by the Bonneville Power Administration (BPA), US Department of Energy, as part of BPA`s program to protect, mitigate, and enhance fish and wildlife affected by the development and operation of hydroelectric facilities on the Columbia River and its tributaries. Illegal harvest and violation of habitat protection regulations are factors affecting the survival of many native species of anadromous and resident fish in the Columbia Basin.

  2. Increased levels of harvest and habitat law enforcement and public awareness for anadromous salmonids and resident fish in the Columbia River Basin - Demonstration period, 1992-1994. Final report

    International Nuclear Information System (INIS)

    This report was funded by the Bonneville Power Administration (BPA), US Department of Energy, as part of BPA's program to protect, mitigate, and enhance fish and wildlife affected by the development and operation of hydroelectric facilities on the Columbia River and its tributaries. Illegal harvest and violation of habitat protection regulations are factors affecting the survival of many native species of anadromous and resident fish in the Columbia Basin

  3. Essential Fish Habitat (EFH) Areas Protected From Fishing

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Designated Essential Fish Habitat (EFH) areas where fishing or the use of fishing gears has been restricted or modified in order to minimize the adverse effects of...

  4. Habitat Management Plan for Ernest F. Hollings Ace Basin National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Ernest F. Hollings Ace Basin NWR Habitat Management Plan provides a long-term vision and specific guidance on managing habitats for the resources of concern at...

  5. Hungry Horse Dam Fisheries Mitigation : Fish Passage and Habitat Improvement in the Upper Flathead River Basin, 1991-1996 Progress Report.

    Energy Technology Data Exchange (ETDEWEB)

    Knotek, W.Ladd; Deleray, Mark; Marotz, Brian L.

    1997-08-01

    In the past 50 years, dramatic changes have occurred in the Flathead Lake and River system. Degradation of fishery resources has been evident, in part due to deterioration of aquatic habitat and introduction of non-endemic fish and invertebrate species. Habitat loss has been attributed to many factors including the construction and operation of Hungry Horse Dam, unsound land use practices, urban development, and other anthropogenic and natural disturbances. Fish migration has also been limited by barriers such as dams and impassible culverts. Cumulatively, these factors have contributed to declines in the distribution and abundance of native fish populations. Recovery of fish populations requires that a watershed approach be developed that incorporates long-term aquatic habitat needs and promotes sound land use practices and cooperation among natural resource management agencies. In this document, the authors (1) describe completed and ongoing habitat improvement and fish passage activities under the Hungry Horse Fisheries Mitigation Program, (2) describe recently identified projects that are in the planning stage, and (3) develop a framework for identifying prioritizing, implementing, and evaluating future fish habitat improvement and passage projects.

  6. Field review of fish habitat improvement projects in central Idaho

    International Nuclear Information System (INIS)

    The goal of this field review was to provide information to the Bonneville Power Administration (BPA) regarding previous and ongoing fish habitat improvement projects in central Idaho. On July 14, 1992, the review team met at the Sawtooth National Recreation Area office near Ketchum, Idaho, for a slide presentation illustrating several habitat projects during their construction phases. Following the slide presentation, the review team inspected fish habitat projects that have been implemented in the last several years in the Stanley Basin and adjacent valleys. At each site the habitat project was described to the field team and a brief period for project inspection followed. The review team visited approximately a dozen sites on the Challis, Sawtooth, and Boise National Forests over a period of approximately two and a half days. There are two objectives of this review namely to summarize observations for specific field sites and to provide overview commentary regarding the BPA habitat improvement program in central Idaho

  7. Field Review of Fish Habitat Improvement Projects in Central Idaho.

    Energy Technology Data Exchange (ETDEWEB)

    Beschta, Robert L.; Griffith, Jack; Wesche, Thomas A.

    1993-05-01

    The goal of this field review was to provide information to the Bonneville Power Administration (BPA) regarding previous and ongoing fish habitat improvement projects in central Idaho. On July 14, 1992, the review team met at the Sawtooth National Recreation Area office near Ketchum, Idaho, for a slide presentation illustrating several habitat projects during their construction phases. Following the slide presentation, the review team inspected fish habitat projects that have been implemented in the last several years in the Stanley Basin and adjacent valleys. At each site the habitat project was described to the field team and a brief period for project inspection followed. The review team visited approximately a dozen sites on the Challis, Sawtooth, and Boise National Forests over a period of approximately two and a half days. There are two objectives of this review namely to summarize observations for specific field sites and to provide overview commentary regarding the BPA habitat improvement program in central Idaho.

  8. Linking Fish Habitat Modelling and Sediment Transport in Running Waters

    Institute of Scientific and Technical Information of China (English)

    Andreas; EISNER; Silke; WIEPRECHT; Matthias; SCHNEIDER

    2005-01-01

    The assessment of ecological status for running waters is one of the major issues within an integrated river basin management and plays a key role with respect to the implementation of the European Water Frame- work Directive (WFD).One of the tools supporting the development of sustainable river management is physi- cal habitat modeling,e.g.,for fish,because fish population are one of the most important indicators for the e- colngical integrity of rivers.Within physical habitat models hydromorphological ...

  9. Does habitat complexity influence fish recruitment?

    Directory of Open Access Journals (Sweden)

    A. CHEMINÉE

    2014-06-01

    Full Text Available Human activities facilitate coastal habitat transformation and homogenization. The spread of marine invasive species is one example. This in turn may influence fish recruitment and the subsequent replenishment of adult assemblages. We tested habitat complexity effect on fish (Teleostei recruitment by experimentally manipulating meadows of the habitat-forming invasive macroalga Caulerpa taxifolia (Chlorophyta. Among the fourteen fish species recorded during the experiment, only two labrids (Coris julis and Symphodus ocellatus settled in abundance among these meadows. Patterns in the abundance of these juveniles suggested that reduced tri-dimensional meadow complexity may reduce habitat quality and result in altered habitat choices and / or differential mortality of juveniles, therefore reducing fish recruitment and likely the abundance of adults.

  10. Habitat Use Database - Groundfish Essential Fish Habitat (EFH) Habitat Use Database (HUD)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Habitat Use Database (HUD) was specifically designed to address the need for habitat-use analyses in support of groundfish EFH, HAPCs, and fishing and...

  11. Habitat selection by emperor fish larvae

    OpenAIRE

    Nakamura, Y; Shibuno, T.; Lecchini, David; Watanabe, Y.

    2009-01-01

    One of the great puzzles of coral reef fish ecology is how pelagic larvae locate the habitat in which they settle. The present study explored whether offshore emperor fish (Lethrinidae) larvae selected a specific reef and/or habitat at settlement. Although older juveniles are known to use back-reef seagrass beds as a potential nursery habitat, information is scarce regarding pre-settlement larvae. Using light traps anchored on the reef slopes at seagrass-replete and seagrass-free reefs (lshig...

  12. Yakima Basin Fish Passage Project, Phase 2

    International Nuclear Information System (INIS)

    Implementation of the Yakima Basin Fish Passage Project -- Phase 2 would significantly improve the production of anadromous fish in the Yakima River system. The project would provide offsite mitigation and help to compensate for lower Columbia River hydroelectric fishery losses. The Phase 2 screens would allow greater numbers of juvenile anadromous fish to survive. As a consequence, there would be higher returns of adult salmon and steelhead to the Yakima River. The proposed action would play an integral part in the overall Yakima River anadromous fish enhancement program (fish passage improvement, habitat enhancement, hatchery production increases, and harvest management). These would be environmental benefits associated with implementation of the Fish Passage and Protective Facilities Phase 2 Project. Based on the evaluation presented in this assessment, there would be no significant adverse environmental impacts if the proposed action was carried forward. No significant adverse environmental effects have been identified from construction and operation of the Yakima Phase 2 fish passage project. Proper design and implementation of the project will ensure no adverse effects will occur. Based on the information in this environmental analysis, BPA's and Reclamation's proposal to construct these facilities does not constitute a major Federal action that could significantly affect the quality of the human environment. 8 refs., 4 figs., 6 tabs

  13. Umatilla River Subbasin Fish Habitat Improvement; 1995 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Laws, Troy S. [Oregon Department of Fish and Wildlife, Pendleton, OR (United States)

    1996-06-01

    This annual report is in fulfillment of contract obligations with Bonneville Power Administration which is the funding source for the Oregon Department of Fish and Wildlife`s Umatilla Basin Habitat Improvement Project. Major activities undertaken during this report period included: (1) Flood damage assessment of project leases after the May 1995 and November 1995 floods, (2) reconstruction of 0.75 miles of riparian fence, (3) inspection and routine maintenance of 14.8 miles of fence, (4) collection of approximately 55,000 native willow and cottonwood cuttings and installation of approximately 21,600 of these material, (5) implementation of two bioengineering projects and initiation of a third project, (6) installation of approximately 30 tree/rootwads for fish habitat enhancement, (7) removal of an abandoned flood irrigation dam/fish barrier, (8) collection and summarization of physical and biological monitoring data, and (9) extensive interagency coordination.

  14. Umatilla River Subbasin Fish Habitat Improvement; 1993 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Bailey, Timothy D.; Laws, Troy S. (Oregon Department of Fish and Wildlife)

    1994-05-01

    This annual report is in fulfillment of contract obligations with Bonneville Power Administration which is the funding source for the Oregon Department of Fish and Wildlife`s Umatilla Basin Habitat Improvement Project. Major activities undertaken during this report period included: (1) procurement of one access easement with a private landowner, (2) design, layout, and implementation of 3.36 miles of instream structure maintenance, (3) inspection and routine maintenance of 15.1 miles of fence, (4) revegetation along 3.36 miles of stream, (5) collection and summarization of physical and biological monitoring data, (6) extensive interagency coordination, and (7) environmental education activities with local high school students.

  15. Organochlorine pesticides in fishes and sediments from the Tensas River Basin, Lousiana

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The aquatic habitats of the Tensas River Basin in northeastern Louisiana have been heavily impacted by sediment and agrichemical runoff due to intensive drainage,...

  16. Relationships Between Landscape Habitat Variables and Chinook Salmon Production in the Columbia River Basin, 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Thompson, William L.; Lee, Danny C.

    1999-09-01

    This publication concerns the investigation of potential relationships between various landscape habitat variables and estimates of fish production from 25 index stocks of spring/summer chinook salmon with the Columbia River Basin.

  17. Habitat specialization in tropical continental shelf demersal fish assemblages.

    Directory of Open Access Journals (Sweden)

    Ben M Fitzpatrick

    Full Text Available The implications of shallow water impacts such as fishing and climate change on fish assemblages are generally considered in isolation from the distribution and abundance of these fish assemblages in adjacent deeper waters. We investigate the abundance and length of demersal fish assemblages across a section of tropical continental shelf at Ningaloo Reef, Western Australia, to identify fish and fish habitat relationships across steep gradients in depth and in different benthic habitat types. The assemblage composition of demersal fish were assessed from baited remote underwater stereo-video samples (n = 304 collected from 16 depth and habitat combinations. Samples were collected across a depth range poorly represented in the literature from the fringing reef lagoon (1-10 m depth, down the fore reef slope to the reef base (10-30 m depth then across the adjacent continental shelf (30-110 m depth. Multivariate analyses showed that there were distinctive fish assemblages and different sized fish were associated with each habitat/depth category. Species richness, MaxN and diversity declined with depth, while average length and trophic level increased. The assemblage structure, diversity, size and trophic structure of demersal fishes changes from shallow inshore habitats to deeper water habitats. More habitat specialists (unique species per habitat/depth category were associated with the reef slope and reef base than other habitats, but offshore sponge-dominated habitats and inshore coral-dominated reef also supported unique species. This suggests that marine protected areas in shallow coral-dominated reef habitats may not adequately protect those species whose depth distribution extends beyond shallow habitats, or other significant elements of demersal fish biodiversity. The ontogenetic habitat partitioning which is characteristic of many species, suggests that to maintain entire species life histories it is necessary to protect corridors of

  18. Habitat specialization in tropical continental shelf demersal fish assemblages.

    Science.gov (United States)

    Fitzpatrick, Ben M; Harvey, Euan S; Heyward, Andrew J; Twiggs, Emily J; Colquhoun, Jamie

    2012-01-01

    The implications of shallow water impacts such as fishing and climate change on fish assemblages are generally considered in isolation from the distribution and abundance of these fish assemblages in adjacent deeper waters. We investigate the abundance and length of demersal fish assemblages across a section of tropical continental shelf at Ningaloo Reef, Western Australia, to identify fish and fish habitat relationships across steep gradients in depth and in different benthic habitat types. The assemblage composition of demersal fish were assessed from baited remote underwater stereo-video samples (n = 304) collected from 16 depth and habitat combinations. Samples were collected across a depth range poorly represented in the literature from the fringing reef lagoon (1-10 m depth), down the fore reef slope to the reef base (10-30 m depth) then across the adjacent continental shelf (30-110 m depth). Multivariate analyses showed that there were distinctive fish assemblages and different sized fish were associated with each habitat/depth category. Species richness, MaxN and diversity declined with depth, while average length and trophic level increased. The assemblage structure, diversity, size and trophic structure of demersal fishes changes from shallow inshore habitats to deeper water habitats. More habitat specialists (unique species per habitat/depth category) were associated with the reef slope and reef base than other habitats, but offshore sponge-dominated habitats and inshore coral-dominated reef also supported unique species. This suggests that marine protected areas in shallow coral-dominated reef habitats may not adequately protect those species whose depth distribution extends beyond shallow habitats, or other significant elements of demersal fish biodiversity. The ontogenetic habitat partitioning which is characteristic of many species, suggests that to maintain entire species life histories it is necessary to protect corridors of connected habitats

  19. Fish and Aquatic Habitat Survey: Sheldon National Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — To address the need for baseline inventories of biota and abiotic features, the Columbia River Fisheries Program Office (CRFPO) conducted fish and aquatic habitat...

  20. Fish ecomorphology: predicting habitat preferences of stream fishes from their body shape.

    OpenAIRE

    Chan, Matthew D.

    2001-01-01

    This research tested the ability of fish morphology to predict membership of fishes in habitat guilds, their swimming performance, and habitat preference. Further, it considered methods for choosing a surrogate species to identify habitat of target species. Morphological discriminant functions were developed using morphological traits of fishes from one river to identify membership in two habitat guild systems (mesohabitat and microhabitat). Functions were then used to test factors influen...

  1. The role of satellite lakes in conservation of fish species diversity in the Lake Kyoga basin

    OpenAIRE

    Ogutu-Ohwayo, R.; Wandera, S.B.; Namulemo, G.; Mbabazi, D.

    1999-01-01

    Lakes Victoria and Kyoga had, a diverse fish fauna, which was important as food for local population and valuable in scientific studies. Over the past twenty years, the diversity of fish in these lakes had declined due to over-exploitation, introduction of new fish species including the piscivorous Nile perch and degradation of fish habitat. Studies of satellite lakes in the Victoria and Kyoga lake basins suggested that some of these lakes harboured species which had been lost from the mai...

  2. Development of a spatially distributed model of fish population density for habitat assessment of rivers

    Science.gov (United States)

    Sui, Pengzhe; Iwasaki, Akito; Ryo, Masahiro; Saavedra, Oliver; Yoshimura, Chihiro

    2013-04-01

    Flow conditions play an important role in sustaining biodiversity of river ecosystem. However, their relations to freshwater fishes, especially to fish population density, have not been clearly described. This study, therefore, aimed to propose a new methodology to quantitatively link habitat conditions, including flow conditions and other physical conditions, to population density of fish species. We developed a basin-scale fish distribution model by integrating the concept of habitat suitability assessment with a distributed hydrological model (DHM) in order to estimate fish population density with particular attention to flow conditions. Generalized linear model (GLM) was employed to evaluate the relationship between population density of fish species and major environmental factors. The target basin was Sagami River in central Japan, where the river reach was divided into 10 sections by estuary, confluences of tributaries, and river-crossing structures (dams, weirs). The DHM was employed to simulate river discharge from 1998 to 2005, which was used to calculate 10 flow indices including mean discharge, 25th and 75th percentile discharge, duration of low and high flows, number of floods. In addition, 5 water quality parameters and 13 other physical conditions (such as basin area, river width, mean diameter of riverbed material, and number of river-crossing structures upstream and downstream) of each river section were considered as environmental variables. In case of Sagami River, 10 habitat variables among them were then selected based on their correlations to avoid multicollinearity. Finally, the best GLM was developed for each species based on Akaike's information criterion. As results, population densities of 16 fish species in Sagami River were modelled, and correlation coefficients between observed and calculated population densities for 10 species were more than 0.70. The key habitat factors for population density varied among fish species. Minimum

  3. Stream habitat and water-quality information for sites in the Buffalo River Basin and nearby basins of Arkansas, 2001-2002

    Science.gov (United States)

    Petersen, James C.

    2004-01-01

    The Buffalo River lies in north-central Arkansas and is a tributary of the White River. Stream-habitat and water-quality information are presented for 52 sites in the Buffalo River Basin and adjacent areas of the White River Basin. The information was collected during the summers of 2001 and 2002 to supplement fish community sampling during the same time period.

  4. Establishment of blue mussel beds to enhance fish habitats

    DEFF Research Database (Denmark)

    Kristensen, Louise Dahl; Stenberg, Claus; Støttrup, Josianne;

    2015-01-01

    Human activity has impacted many coastal fjords causing degeneration of the structure and function of the fish habitats. In Nørrefjord, Denmark, local fishermen complained of declining fish catches which could be attributed to eutrophication and extraction of sediments over several decades. This ...... directly on hemp sacs hanging on long-lines was the most effective method. This new method is potentially a useful management tool to improve fish habitats...

  5. Seasonal and interannual effects of hypoxia on fish habitat quality in central Lake Erie

    Science.gov (United States)

    Arend, Kristin K.; Beletsky, Dmitry; DePinto, Joseph; Ludsin, Stuart A.; Roberts, James J.; Rucinski, Daniel K.; Scavia, Donald; Schwab, David J.; Höök, Tomas O.

    2011-01-01

    1. Hypoxia occurs seasonally in many stratified coastal marine and freshwater ecosystems when bottom dissolved oxygen (DO) concentrations are depleted below 2–3 mg O2 L-1. 2. We evaluated the effects of hypoxia on fish habitat quality in the central basin of Lake Erie from 1987 to 2005, using bioenergetic growth rate potential (GRP) as a proxy for habitat quality. We compared the effect of hypoxia on habitat quality of (i) rainbow smelt, Osmerus mordax mordax Mitchill (young-of-year, YOY, and adult), a cold-water planktivore, (ii) emerald shiner, Notropis atherinoides Rafinesque (adult), a warm-water planktivore, (iii) yellow perch, Perca flavescens Mitchill (YOY and adult), a cool-water benthopelagic omnivore and (iv) round goby Neogobius melanostomus Pallas (adult) a eurythermal benthivore. Annual thermal and DO profiles were generated from 1D thermal and DO hydrodynamics models developed for Lake Erie’s central basin. 3. Hypoxia occurred annually, typically from mid-July to mid-October, which spatially and temporally overlaps with otherwise high benthic habitat quality. Hypoxia reduced the habitat quality across fish species and life stages, but the magnitude of the reduction varied both among and within species because of the differences in tolerance to low DO levels and warm-water temperatures. 4. Across years, trends in habitat quality mirrored trends in phosphorus concentration and water column oxygen demand in central Lake Erie. The per cent reduction in habitat quality owing to hypoxia was greatest for adult rainbow smelt and round goby (mean: -35%), followed by adult emerald shiner (mean: -12%), YOY rainbow smelt (mean: -10%) and YOY and adult yellow perch (mean: -8.5%). 5. Our results highlight the importance of differential spatiotemporally interactive effects of DO and temperature on relative fish habitat quality and quantity. These effects have the potential to influence the performance of individual fish species as well as population dynamics

  6. Habitat-based polymorphism is common in stream fishes.

    Science.gov (United States)

    Senay, Caroline; Boisclair, Daniel; Peres-Neto, Pedro R

    2015-01-01

    Morphological differences (size and shape) across habitats are common in lake fish where differences relate to two dominant contrasting habitats: the pelagic and littoral habitat. Repeated occurrence of littoral and pelagic morphs across multiple populations of several lake fish species has been considered as important evidence that polymorphism is adaptive in these systems. It has been suggested that these habitat-based polymorphic differences are due to the temporal stability of the differences between littoral and pelagic habitats. Although streams are spatially heterogeneous, they are also more temporally dynamic than lakes and it is still an open question whether streams provide the environmental conditions that promote habitat-based polymorphism. We tested whether fish from riffle, run and pool habitats, respectively, differed consistently in their morphology. Our test compared patterns of morphological variation (size and shape) in 10 fish species from the three stream habitat types in 36 separate streams distributed across three watersheds. For most species, body size and shape (after controlling for body size) differed across riffle, run and pool habitats. Unlike many lake species, the nature of these differences was not consistent across species, possibly because these species use these habitat types in different ways. Our results suggest that habitat-based polymorphism is an important feature also in stream fishes despite the fact that streams are temporally variable in contrast to lake systems. Future research is required to assess whether the patterns of habitat-based polymorphism encountered in streams have a genetic basis or they are simply the result of within generation phenotypic plasticity. PMID:25041645

  7. Patterns of fish habitat use in Mediterranean streams-type

    OpenAIRE

    Ilhéu, Maria

    2004-01-01

    The aim of this study is to contribute to the understanding of the Mediterranean freshwater fish ecology, emphasising the habitat use patterns. Extreme seasonal variations in flow regime are observed in many Mediterranean streams, which leads to alternating lotic (with flow) and lentic (no flow) environments. Considering the complex processes occurring in temporary streams, the patterns of fish habitat use should be assessed in different temporal and spatial scales.

  8. Summary report for Bureau of Fisheries stream habitat surveys: Cowlitz River basin. Final report 1934--1942

    International Nuclear Information System (INIS)

    This document contains summary reports of stream habitat surveys, conducted in the Cowlitz River basin, by the Bureau of Fisheries (BOF, now National Marine Fisheries Service) from 1938--1942. These surveys were part of a larger project to survey streams in the Columbia River basin that provided, or had provided, spawning and rearing habitat for salmon and steelhead. The purpose of the survey was to determine the present condition of the various tributaries with respect to their availability and usefulness for the migration, breeding, and rearing of migratory fishes. Current estimates of the loss of anadromous fish habitat in the Columbia River Basin are based on a series of reports published from 1949--1952 by the US Fish and Wildlife Service

  9. Juvenile coral reef fish use sound to locate habitats

    Science.gov (United States)

    Radford, C. A.; Stanley, J. A.; Simpson, S. D.; Jeffs, A. G.

    2011-06-01

    There is limited knowledge of the orientation cues used by reef fish in their movement among different habitats, especially those cues used during darkness. Although acoustic cues have been found to be important for settlement-stage fish as they seek settlement habitats, only a small number of studies support the possible role of acoustic cues in the orientation of post-settled and adult reef fish. Therefore, the aim of this study was to determine whether habitat-specific acoustic cues were involved in the nocturnal movements of juvenile reef fish to small experimental patch reefs that were broadcasting sound previously recorded from different habitats (Fringing Reef, Lagoon, Silent). Juvenile fish arriving at each patch reef were caught the next morning by divers and were identified. There were a greater number of occasions when juvenile fish (from all species together) moved onto the patch reefs broadcasting Fringing Reef and Lagoon sound (43 and 38%, respectively) compared to Silent reefs (19%) (χ2 = 33.5; P fish from the family Nemipteridae were attracted to the patch reefs broadcasting Lagoon sound (63%) versus those reefs broadcasting either Fringing Reef sound (31%) or Silent (6%). In contrast, there were more occasions when juveniles from the family Pomacentridae were attracted to the patch reefs broadcasting Fringing Reef sound (56%) than either Lagoon (24%) or Silent patch reefs (20%) (χ2 = 19.5; P fish use specific habitat sounds to guide their nocturnal movements. Therefore, the fish are able to not only use the directional information contained in acoustic cues, but can also interpret the content of the acoustic signals for relevant habitat information which is then used in their decision-making for orientation.

  10. Umatilla River Basin Anadromous Fsh Habitat Enhancement Project : 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Shaw, R. Todd

    2001-12-31

    The Umatilla River Basin Anadromous Fish Habitat Enhancement Project continued to identify impacted stream reaches throughout the Umatilla River Basin for habitat improvements during the 2000 project period. Public outreach efforts, biological and physical monitoring, and continued development of a Umatilla River Basin Watershed Assessment assisted the project in fostering public cooperation, targeting habitat deficiencies and determining habitat recovery measures. Habitat enhancement projects continued to be maintained on 44 private properties, four riparian easements and one in-stream enhancement agreement were secured, two new projects implemented and two existing projects improved to enhance anadromous fish habitat and natural fisheries production capabilities in the Umatilla River Basin. New project locations included sites on the mid Umatilla River and Buckaroo Creek. Improvements were implemented at existing project sites on the upper Umatilla River and Wildhorse Creek. A stream bank stabilization project was implemented at approximately River Mile 37.4 Umatilla River to stabilize 760 feet of eroding stream bank and improve in-stream habitat diversity. Habitat enhancements at this site included construction of six rock barbs with one large conifer root wad incorporated into each barb, stinging approximately 10,000 native willow cuttings, planting 195 tubling willows and 1,800 basin wildrye grass plugs, and seeding 40 pounds of native grass seed. Staff time to assist in development of a subcontract and fence materials were provided to establish eight spring sites for off-stream watering and to protect wetlands within the Buckaroo Creek Watershed. A gravel bar was moved and incorporated into an adjacent point bar to reduce stream energy and stream channel confinement within the existing project area at River Mile 85 Umatilla River. Approximately 10,000 native willow cuttings were stung and trenched into the stream channel margins and stream banks, and 360

  11. ENERGETIC EXTREMES IN REEF FISH OCCUPYING HARSH HABITATS

    DEFF Research Database (Denmark)

    Steffensen, John Fleng

    2009-01-01

    document how relatively small changes in fin morphology has afforded some coral reef fish taxa with exceptional locomotor performance and energetic efficiency, and how this key attribute may have played a key role in the evolution and ecology of several diverse Indo-Pacific reef fish families. Using......-swept environment (up to 1 m s-1) whilst incurring a relatively low energetic cost of transport. Paddle-finned sister taxa, which have slightly more rounded fins and occupy sheltered habitats, displayed similar levels of energetic efficiency, but at swimming speeds less than half that of their wing......-finned counterparts. We discuss how such differences in locomotor efficiency are pivotal to the habitat-use of these fishes, and how eco-energetic models may be used to provide new insights into spatial variations in fish demography and ecology among coral reef habitat zones....

  12. Habitat degradation and fishing effects on the size structure of coral reef fish communities.

    Science.gov (United States)

    Wilson, S K; Fisher, R; Pratchett, M S; Graham, N A J; Dulvy, N K; Turner, R A; Cakacaka, A; Polunin, N V C

    2010-03-01

    Overfishing and habitat degradation through climate change pose the greatest threats to sustainability of marine resources on coral reefs. We examined how changes in fishing pressure and benthic habitat composition influenced the size spectra of island-scale reef fish communities in Lau, Fiji. Between 2000 and 2006 fishing pressure declined in the Lau Islands due to declining human populations and reduced demand for fresh fish. At the same time, coral cover declined and fine-scale architectural complexity eroded due to coral bleaching and outbreaks of crown-of-thorns starfish, Acanthaster planci. We examined the size distribution of reef fish communities using size spectra analysis, the linearized relationship between abundance and body size class. Spatial variation in fishing pressure accounted for 31% of the variation in the slope of the size spectra in 2000, higher fishing pressure being associated with a steeper slope, which is indicative of fewer large-bodied fish and/or more small-bodied fish. Conversely, in 2006 spatial variation in habitat explained 53% of the variation in the size spectra slopes, and the relationship with fishing pressure was much weaker (approximately 12% of variation) than in 2000. Reduced cover of corals and lower structural complexity was associated with less steep size spectra slopes, primarily due to reduced abundance of fish < 20 cm. Habitat degradation will compound effects of fishing on coral reefs as increased fishing reduces large-bodied target species, while habitat loss results in fewer small-bodied juveniles and prey that replenish stocks and provide dietary resources for predatory target species. Effective management of reef resources therefore depends on both reducing fishing pressure and maintaining processes that encourage rapid recovery of coral habitat. PMID:20405798

  13. Habitat Quality and Anadromous Fish Production on the Warm Springs Reservation. Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Fritsch, Mark A.

    1995-06-01

    The number of anadromous fish returning to the Columbia River and its tributaries has declined sharply in recent years. Changes in their freshwater, estuarine, and ocean environments and harvest have all contributed to declining runs of anadromous fish. Restoration of aquatic resources is of paramount importance to the Confederated Tribes of the Warm Springs (CTWS) Reservation of Oregon. Watersheds on the Warm Springs Reservation provide spawning and rearing habitat for several indigenous species of resident and anadromous fish. These streams are the only ones in the Deschutes River basin that still sustain runs of wild spring chinook salmon, Oncorhynchus, tshawytscha. Historically, reservation streams supplied over 169 km of anadromous fish habitat. Because of changes in flows, there are now only 128 km of habitat that can be used on the reservation. In 1981, the CTWS began a long-range, 3-phase study of existing and potential fish resources on the reservation. The project, consistent with the Northwest Power Planning Council`s Fish and Wildlife Program, was designed to increase the natural production of anadromous salmonids on the reservation.

  14. Habitat quality and anadromous fish production on the Warm Springs Reservation. Final report

    International Nuclear Information System (INIS)

    The number of anadromous fish returning to the Columbia River and its tributaries has declined sharply in recent years. Changes in their freshwater, estuarine, and ocean environments and harvest have all contributed to declining runs of anadromous fish. Restoration of aquatic resources is of paramount importance to the Confederated Tribes of the Warm Springs (CTWS) Reservation of Oregon. Watersheds on the Warm Springs Reservation provide spawning and rearing habitat for several indigenous species of resident and anadromous fish. These streams are the only ones in the Deschutes River basin that still sustain runs of wild spring chinook salmon, Oncorhynchus, tshawytscha. Historically, reservation streams supplied over 169 km of anadromous fish habitat. Because of changes in flows, there are now only 128 km of habitat that can be used on the reservation. In 1981, the CTWS began a long-range, 3-phase study of existing and potential fish resources on the reservation. The project, consistent with the Northwest Power Planning Council's Fish and Wildlife Program, was designed to increase the natural production of anadromous salmonids on the reservation

  15. Sensitivity of river fishes to climate change: The role of hydrological stressors on habitat range shifts.

    Science.gov (United States)

    Segurado, Pedro; Branco, Paulo; Jauch, Eduardo; Neves, Ramiro; Ferreira, M Teresa

    2016-08-15

    Climate change will predictably change hydrological patterns and processes at the catchment scale, with impacts on habitat conditions for fish. The main goal of this study is to assess how shifts in fish habitat favourability under climate change scenarios are affected by hydrological stressors. The interplay between climate and hydrological stressors has important implications in river management under climate change because management actions to control hydrological parameters are more feasible than controlling climate. This study was carried out in the Tamega catchment of the Douro basin. A set of hydrological stressor variables were generated through a process-based modelling based on current climate data (2008-2014) and also considering a high-end future climate change scenario. The resulting parameters, along with climatic and site-descriptor variables were used as explanatory variables in empirical habitat models for nine fish species using boosted regression trees. Models were calibrated for the whole Douro basin using 254 fish sampling sites and predictions under future climate change scenarios were made for the Tamega catchment. Results show that models using climatic variables but not hydrological stressors produce more stringent predictions of future favourability, predicting more distribution contractions or stronger range shifts. The use of hydrological stressors strongly influences projections of habitat favourability shifts; the integration of these stressors in the models thinned shifts in range due to climate change. Hydrological stressors were retained in the models for most species and had a high importance, demonstrating that it is important to integrate hydrology in studies of impacts of climate change on freshwater fishes. This is a relevant result because it means that management actions to control hydrological parameters in rivers will have an impact on the effects of climate change and may potentially be helpful to mitigate its negative

  16. Sensitivity of river fishes to climate change: The role of hydrological stressors on habitat range shifts.

    Science.gov (United States)

    Segurado, Pedro; Branco, Paulo; Jauch, Eduardo; Neves, Ramiro; Ferreira, M Teresa

    2016-08-15

    Climate change will predictably change hydrological patterns and processes at the catchment scale, with impacts on habitat conditions for fish. The main goal of this study is to assess how shifts in fish habitat favourability under climate change scenarios are affected by hydrological stressors. The interplay between climate and hydrological stressors has important implications in river management under climate change because management actions to control hydrological parameters are more feasible than controlling climate. This study was carried out in the Tamega catchment of the Douro basin. A set of hydrological stressor variables were generated through a process-based modelling based on current climate data (2008-2014) and also considering a high-end future climate change scenario. The resulting parameters, along with climatic and site-descriptor variables were used as explanatory variables in empirical habitat models for nine fish species using boosted regression trees. Models were calibrated for the whole Douro basin using 254 fish sampling sites and predictions under future climate change scenarios were made for the Tamega catchment. Results show that models using climatic variables but not hydrological stressors produce more stringent predictions of future favourability, predicting more distribution contractions or stronger range shifts. The use of hydrological stressors strongly influences projections of habitat favourability shifts; the integration of these stressors in the models thinned shifts in range due to climate change. Hydrological stressors were retained in the models for most species and had a high importance, demonstrating that it is important to integrate hydrology in studies of impacts of climate change on freshwater fishes. This is a relevant result because it means that management actions to control hydrological parameters in rivers will have an impact on the effects of climate change and may potentially be helpful to mitigate its negative

  17. Habitat selection and indirect interactions in fish communities

    OpenAIRE

    Beier, Ulrika

    2013-01-01

    To increase the understanding of freshwater lake ecosystems, I have studied the habitat selection of perch (Perca fluviatilis L.), roach (Rutilus rutilus (L.)), and vendace (Coregonus albula (L.)). These fish species use the pelagic and the littoral-benthic habitats in lakes to different extents. Perch and roach are omnivorous, and perch become piscivorous at larger sizes. Vendace is a pelagic species specialized in eating zooplankton. Vendace was expected to affect biotic interactions and ha...

  18. Umatilla River Subbasin Fish Habitat Improvement Program, 2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    St. Hilaire, Danny R. (Oregon Department of Fish and Wildlife, Pendleton, OR)

    2006-05-01

    This annual report is in fulfillment of contractual obligations with Bonneville Power Administration (BPA), which is the funding source for the Oregon Department of Fish and Wildlife's (ODFW), Umatilla River Subbasin Fish Habitat Improvement Program (Program). The Program works cooperatively with private landowners to develop long-term restoration agreements, under which, passive and active Habitat Improvement Projects are conducted. Historically, projects have included livestock exclusion fencing (passive restoration) to protect riparian habitats, along with the installation of instream structures (active restoration) to address erosion and improve fish habitat conditions. In recent years, the focus of active restoration has shifted to bioengineering treatments and, more recently, to channel re-design and re-construction aimed at improving fish habitat, through the restoration of stable channel function. This report provides a summary of Program activities for the 2005 calendar year (January 1 through December 31, 2005), within each of the four main project phases, including: (1) Implementation--Pre-Work, (2) Implementation--On Site Development, (3) Operation and Maintenance (O&M), and (4) Monitoring and Evaluation (M&E). This report also summarizes activities associated with Program Administration, Interagency Coordination, and Public Education.

  19. Aspects of fish conservation in the upper Patos Lagoon basin.

    Science.gov (United States)

    Fontoura, N F; Vieira, J P; Becker, F G; Rodrigues, L R; Malabarba, L R; Schulz, U H; Möller, O O; Garcia, A M; Vilella, F S

    2016-07-01

    The Patos Lagoon basin is a large (201 626 km(2) ) and complex drainage system in southern Brazil. The lagoon is 250 km long and 60 km wide, covering an area of 10 360 km(2) . The exchange of water with the Atlantic Ocean occurs through a 0·8 km wide and 15 m deep inlet, fixed by 4 km long jetties, at the southernmost part of the Patos Lagoon. The estuarine area is restricted to its southern portion (10%), although the upper limit of saline waters migrates seasonally and year to year, influenced by the wind regime and river discharge. The known number of recorded limnetic fish species is 200, but this number is expected to increase. A higher endemism is observed in fish species occurring in upper tributaries. The basin suffers from the direct impact of almost 7 million inhabitants, concentrated in small to large cities, most with untreated domestic effluents. There are at least 16 non-native species recorded in natural habitats of the Patos Lagoon basin, about half of these being from other South American river basins. Concerning the fishery, although sport and commercial fisheries are widespread throughout the Patos Lagoon basin, the lagoon itself and the estuarine area are the main fishing areas. Landing statistics are not available on a regular basis or for the whole basin. The fishery in the northern Patos Lagoon captures 31 different species, nine of which are responsible for most of the commercial catches, but only three species are actually sustaining the artisanal fishery: the viola Loricariichthys anus: 455 kg per 10 000 m(2) gillnet per day, the mullet Mugil liza: 123 kg per 10 000 m(2) gillnet per day and the marine catfish Genidens barbus: 50 kg per 10 000 m(2) gillnet per day. A decline of the fish stocks can be attributed to inadequate fishery surveillance, which leads to overfishing and mortality of juveniles, or to decreasing water quality because of urban and industrial activities and power production. Global climatic changes also represent a

  20. Watershed processes, fish habitat, and salmonid distribution in the Tonsina River (Copper River watershed), Alaska

    Science.gov (United States)

    Booth, D. B.; Ligon, F. K.; Sloat, M. R.; Amerson, B.; Ralph, S. C.

    2007-12-01

    The Copper River watershed is a critical resource for northeastern Pacific salmon, with annual escapements in the millions. The Tonsina River basin, a diverse 2100-km2 tributary to the Copper River that supports important salmonid populations, offers an opportunity to integrate watershed-scale channel network data with field reconnaissance of physical processes and observed distribution of salmonid species. Our long-term goals are to characterize habitats critical to different salmonid life stages, describe the geologic context and current geologic processes that support those habitats in key channel reaches, and predict their watershed-wide distribution. The overarching motivation for these goals is resource conservation, particularly in the face of increased human activity and long-term climate change. Channel geomorphology within the Tonsina River basin reflects inherited glacial topography. Combinations of drainage areas, slopes, channel confinement, and sediment-delivery processes are unique to this environment, giving rise to channel "types" that are recognizable but that do not occur in the same positions in the channel network as in nonglaciated landscapes. We also recognize certain channel forms providing fish habitat without analog in a nonglacial landscape, notably relict floodplain potholes from once-stranded and long-melted ice blocks. Salmonid species dominated different channel types within the watershed network. Sockeye salmon juveniles were abundant in the low-gradient, turbid mainstem; Chinook juveniles were also captured in the lower mainstem, with abundant evidence of spawning farther downstream. Coho juveniles were abundant in upper, relatively large tributaries, even those channels with cobble-boulder substrates and minimal woody debris that provide habitats more commonly utilized by Chinook in low-latitude systems. More detailed field sampling also revealed that patterns of species composition and abundance appeared related to small

  1. Predicted channel types - Potential for Habitat Improvement in the Columbia River Basin

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Basin-wide analysis of potential to improve tributary habitats in the Columbia River basin through restoration of habitat-forming processes. Identification of...

  2. Predicted riparian vegetation - Potential for Habitat Improvement in the Columbia River Basin

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Basin-wide analysis of potential to improve tributary habitats in the Columbia River basin through restoration of habitat-forming processes. Identification of...

  3. Combined Annual Habitat Work Plans, 2010-2012 : Fish Springs NWR

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This combined Annual Habitat Work Plan (AHWP) for Fish Springs National Wildlife Refuge provides a report on habitat management activities for years 2010- 2012 and...

  4. Summary Report for Bureau of Fisheries Stream Habitat Surveys : Yakima River Basin, 1934-1942, Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    McIntosh, Bruce A.; Clark, Sharon E.; Sedell, James R.

    1996-01-01

    This document contains summary reports of stream habitat surveys, conducted in the Yakima River basin, by the Bureau of Fisheries (BOF, now National Marine Fisheries Service) from 1934-1942. These surveys were part of a larger project to survey streams in the Columbia River basin that provided, or had provided, spawning and rearing habitat for salmon and steelhead (Rich, 1948). The purpose of the survey was, as described by Rich, 'to determine the present condition of the various tributaries with respect to their availability and usefulness for the migration, breeding, and rearing of migratory fishes'. Current estimates of the loss of anadromous fish habitat in the Columbia River Basin are based on a series of reports published from 1949-1952 by the U.S. Fish and Wildlife Service. The reports were brief, qualitative accounts of over 5000 miles of stream surveys conducted by the BOF from 1934-1946 (Bryant, 1949; Bryant and Parkhurst, 1950; Parkhurst, 1950a-c; Parkhurst et al., 1950). Despite their brevity, these BOF reports have formed the basis for estimating fish habitat losses and conditions in the Columbia River Basin (Fulton, 1968, 1970; Thompson, 1976; NPPC, 1986). Recently, the field notebooks from the BOF surveys were discovered. The data is now archived and stored in the Forest Science DataBank at Oregon State University (Stafford et al., 1984; 1988). These records are the earliest and most comprehensive documentation available of the condition and extent of anadromous fish habitat before hydropower development in the Columbia River Basin. They provide the baseline data for quantifying changes and setting a benchmark for future restoration of anadromous fish habitat throughout the Basin. The summaries in this book are exact replicates of the originals. Due to discrepancies between the field data and the summaries, the database should be used to assess pool and substrate conditions. This data is available from the Bonneville Power Administration

  5. Summary Report for Bureau of Fisheries Stream Habitat Surveys : Willamette River Basin, 1934-1942, Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    McIntosh, Bruce A.; Clark, Sharon E.; Sedell, James R.

    1995-01-01

    This document contains summary reports of stream habitat-surveys, conducted in the Willamette River basin, by the Bureau of Fisheries (BOF, now National Marine Fisheries Service) from 1934-1942. These surveys were part of a larger project to survey streams in the Columbia River basin that provided, or had provided, spawning and rearing habitat for salmon and steelhead (Rich, 1948). The purpose of the survey was, as described by Rich, 'to determine the present condition of the various tributaries with respect to their availability and usefulness for the migration, breeding, and rearing of migratory fishes'. Current estimates of the loss of anadromous fish habitat in the Columbia River Basin are based on a series of reports published from 1949-1952 by the U.S. Fish and Wildlife Service. The reports were brief, qualitative accounts of over 5000 miles of stream surveys conducted by the BOF from 1934-1946 (Bryant, 1949; Bryant and Parkhurst, 1950; Parkhurst, 1950a-c; Parkhurst et al., 1950). Despite their brevity, these BOF reports have formed the basis for estimating fish habitat losses and conditions in the Columbia River Basin (Fulton, 1968, 1970; Thompson, 1976; NPPC, 1986). Recently, the field notebooks from the BOF surveys were discovered. The data is now archived and stored in the Forest Science DataBank at Oregon State University (Stafford et al., 1984; 1988). These records are the earliest and most comprehensive documentation available of the condition and extent of anadromous fish habitat before hydropower development in the Columbia River Basin. They provide the baseline data for quantifying changes and setting a benchmark for future restoration of anadromous fish habitat throughout the Basin. The summaries contained in this book are exact replicates of the originals. Due to discrepancies between the field data and the summaries, the database should be used to assess pool and substrate conditions. This data is available from the Bonneville Power

  6. A Wildlife Habitat Protection, Mitigation and Enhancement Plan for Eight Federal Hydroelectric Facilities in the Willamette River Basin: Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Preston, S.K.

    1987-05-01

    The development and operation of eight federal hydroelectric projects in the Willamette River Basin impacted 30,776 acres of prime wildlife habitat. This study proposes mitigative measures for the losses to wildlife and wildlife habitat resulting from these projects, under the direction of the Columbia River Basin (CRB) Fish and Wildlife Program. The CRB Fish and Wildlife Program was adopted in 1982 by the Northwest Power Planning Council, pursuant to the Northwest Power Planning Act of 1980. The proposed mitigation plan is based on the findings of loss assessments completed in 1985, that used a modified Habitat Evaluation Procedure (HEP) to assess the extent of impact to wildlife and wildlife habitat, with 24 evaluation species. The vegetative structure of the impacted habitat was broken down into three components: big game winter range, riparian habitat and old-growth forest. The mitigation plan proposes implementation of the following, over a period of 20 years: (1) purchase of cut-over timber lands to mitigate, in the long-term, for big game winter range, and portions of the riparian habitat and old-growth forest (approx. 20,000 acres); (2) purchase approximately 4,400 acres of riparian habitat along the Willamette River Greenway; and (3) three options to mitigate for the outstanding old-growth forest losses. Monitoring would be required in the early stages of the 100-year plan. The timber lands would be actively managed for elk and timber revenue could provide O and M costs over the long-term.

  7. Regional prediction of basin-scale brown trout habitat suitability

    Science.gov (United States)

    Ceola, S.; Pugliese, A.

    2014-09-01

    In this study we propose a novel method for the estimation of ecological indices describing the habitat suitability of brown trout (Salmo trutta). Traditional hydrological tools are coupled with an innovative regional geostatistical technique, aiming at the prediction of the brown trout habitat suitability index where partial or totally ungauged conditions occur. Several methods for the assessment of ecological indices are already proposed in the scientific literature, but the possibility of exploiting a geostatistical prediction model, such as Topological Kriging, has never been investigated before. In order to develop a regional habitat suitability model we use the habitat suitability curve, obtained from measured data of brown trout adult individuals collected in several river basins across the USA. The Top-kriging prediction model is then employed to assess the spatial correlation between upstream and downstream habitat suitability indices. The study area is the Metauro River basin, located in the central part of Italy (Marche region), for which both water depth and streamflow data were collected. The present analysis focuses on discharge values corresponding to the 0.1-, 0.5-, 0.9-empirical quantiles derived from flow-duration curves available for seven gauging stations located within the study area, for which three different suitability indices (i.e. ψ10, ψ50 and ψ90) are evaluated. The results of this preliminary analysis are encouraging showing Nash-Sutcliffe efficiencies equal to 0.52, 0.65, and 0.69, respectively.

  8. Indigenous fish species in the modern ichthyofauna of the Balkhash basin

    Directory of Open Access Journals (Sweden)

    Nadir Shamilevich Mamilov

    2015-11-01

    Full Text Available Indigenous fish fauna of the Balkhash basin was mostly formed in the postglacial period and consists of 10 species from Cyprinidae family, 5 from Balitoridae, and 1 from Percidae. More than 20 alien fish species were introduced here during XXth century that led to eradication of indigenous fishes from the Balkhash Lake and the Ili River. Our investigations of the fish fauna during last 25 years revealed permanent shortage of living area of indigenous fishes. Nowadays fish communities from only indigenous fish species exist in some remote and isolated water bodies. Areas of all indigenous fish species are become disconnected. Reduction of habitats goes relatively slow for naked osman Gymnodiptychus dybowskii (Kessler, 1874, spotted thicklip loach Triplophysa strauchii (Kessler, 1874, and gray loach Triplophysa dorsalis (Kessler, 1872. Drastic reductions of areas were revealed for Ili marinka Schizothorax pseudoaksaiensis Herzenstein 1889, Balkhash marinka Schizothorax argentatus Kessler 1874, Severtsov’s loach Triplophysa sewerzowii (G.Nikolskii, 1938, Seven River’s minnow Phoxinus brachyurus Berg 1912, Balkhsh minnow Rhynchocypris poljakowii Kessler 1879, and Balkhash perch Perca schrenkii Kessler 1874. Marinkas, osmans and perch often become victims of overfishing and poaching of local people. In that region water resources usually are used by wasteful way and loaded with pollutants. Many indigenous fish species are able to bear relatively high level of environment pollution. Hence, the main threats for indigenous fishes are introductions of trout and sander, habitats lose and unstable hydrological regimen.

  9. Restoring Anadromous Fish Habitat in the Lapwai Creek Watershed, Technical Report 2003-2006.

    Energy Technology Data Exchange (ETDEWEB)

    Rasmussen, Lynn

    2007-02-01

    The Restoring Anadromous Fish Habitat in the Lapwai Creek Watershed is a multi-phase project to enhance steelhead trout in the Lapwai Creek watershed by improving salmonid spawning and rearing habitat. Habitat is limited by extreme high runoff events, low summer flows, high water temperatures, poor instream cover, spawning gravel siltation, and sediment, nutrient and bacteria loading. Funded by the Bonneville Power Administration (BPA) as part of the Northwest Power Planning Council's Fish and Wildlife Program, the project assists in mitigating damage to steelhead runs caused by the Columbia River hydroelectric dams. The project is sponsored by the Nez Perce Soil and Water Conservation District (District). Target fish species include steelhead trout (Oncorhynchus mykiss). Steelhead trout within the Snake River Basin were listed in 1997 as threatened under the Endangered Species Act. Accomplishments for the contract period December 1, 2003 through February 28, 2004 include; seven grade stabilization structures, 0.67 acres of wetland plantings, ten acres tree planting, 500 linear feet streambank erosion control, two acres grass seeding, and 120 acres weed control.

  10. Ocean acidification alters fish populations indirectly through habitat modification

    Science.gov (United States)

    Nagelkerken, Ivan; Russell, Bayden D.; Gillanders, Bronwyn M.; Connell, Sean D.

    2016-01-01

    Ocean ecosystems are predicted to lose biodiversity and productivity from increasing ocean acidification. Although laboratory experiments reveal negative effects of acidification on the behaviour and performance of species, more comprehensive predictions have been hampered by a lack of in situ studies that incorporate the complexity of interactions between species and their environment. We studied CO2 vents from both Northern and Southern hemispheres, using such natural laboratories to investigate the effect of ocean acidification on plant-animal associations embedded within all their natural complexity. Although we substantiate simple direct effects of reduced predator-avoidance behaviour by fishes, as observed in laboratory experiments, we here show that this negative effect is naturally dampened when fish reside in shelter-rich habitats. Importantly, elevated CO2 drove strong increases in the abundance of some fish species through major habitat shifts, associated increases in resources such as habitat and prey availability, and reduced predator abundances. The indirect effects of acidification via resource and predator alterations may have far-reaching consequences for population abundances, and its study provides a framework for a more comprehensive understanding of increasing CO2 emissions as a driver of ecological change.

  11. Summary of information on aquatic biota and their habitats in the Willamette Basin, Oregon, through 1995

    Science.gov (United States)

    Altman, Bob; Henson, C.M.; Waite, I.R.

    1997-01-01

    Available information on aquatic biota of the Willamette Basin was reviewed and summarized to describe current and historical conditions as part of the U.S. Geological Survey's National Water-Quality Assessment Program. Biological parameters emphasized include the status, distribution, and trends of aquatic biota, particularly algae, macroinvertebrates, and fish; the condition of aquatic and riparian habitat in which these biota reside; and the response of these biota to natural and human-associated impacts, including the level, type, and effect of contaminants.

  12. Assessing Potential Conservation and Restoration Areas of Freshwater Fish Fauna in the Indian River Basins

    Science.gov (United States)

    Bhatt, Jay P.; Manish, Kumar; Mehta, Rajender; Pandit, Maharaj K.

    2016-05-01

    Conservation efforts globally are skewed toward terrestrial ecosystems. To date, conservation of aquatic ecosystems, in particular fish fauna, is largely neglected. We provide a country-wide assessment of Indian river ecosystems in order to identify and prioritize areas for protection and restoration of freshwater fish fauna. Using various biodiversity and anthropogenic attributes, coupled with tools of ecological modeling, we delineated areas for fish fauna conservation and restoration in the 20 major river basins of India. To do this, we used prioritization analyses and reserve selection algorithms to derive conservation value index (CVI) and vulnerability index (VI) of the river basins. CVI was estimated using endemicity, rarity, conservation value, and taxonomic singularity, while VI was estimated using a disturbance index derived from percent geographic area of the basin under human settlements, human population density, predominant land use, and total number of exotic fish species in each basin. The two indices, CVI and VI, were converted into geo-referenced maps, and each map was super-imposed onto species richness and forest cover maps, respectively. After superimposition, areas with high CVI and low VI shade intensities were delineated for conservation, while areas with high CVI and high VI shade intensities were demarcated for restoration. In view of the importance of freshwater fish for human livelihoods and consumption, and ecosystems of India's rivers, we call for urgent attention to the conservation of their fish fauna along with restoration of their degraded habitats.

  13. Restoring Anadromous Fish Habitat in Big Canyon Creek Watershed, 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Rasmussen, Lynn (Nez Perce Soil and Conservation District, Lewiston, ID)

    2006-07-01

    The ''Restoring Anadromous Fish Habitat in the Big Canyon Creek Watershed'' is a multi-phase project to enhance steelhead trout in the Big Canyon Creek watershed by improving salmonid spawning and rearing habitat. Habitat is limited by extreme high runoff events, low summer flows, high water temperatures, poor instream cover, spawning gravel siltation, and sediment, nutrient and bacteria loading. Funded by the Bonneville Power Administration (BPA) as part of the Northwest Power Planning Council's Fish and Wildlife Program, the project assists in mitigating damage to steelhead runs caused by the Columbia River hydroelectric dams. The project is sponsored by the Nez Perce Soil and Water Conservation District. Target fish species include steelhead trout (Oncorhynchus mykiss). Steelhead trout within the Snake River Basin were listed in 1997 as threatened under the Endangered Species Act. Accomplishments for the contract period September 1, 2004 through October 31, 2005 include; 2.7 riparian miles treated, 3.0 wetland acres treated, 5,263.3 upland acres treated, 106.5 riparian acres treated, 76,285 general public reached, 3,000 students reached, 40 teachers reached, 18 maintenance plans completed, temperature data collected at 6 sites, 8 landowner applications received and processed, 14 land inventories completed, 58 habitat improvement project designs completed, 5 newsletters published, 6 habitat plans completed, 34 projects installed, 2 educational workshops, 6 displays, 1 television segment, 2 public service announcements, a noxious weed GIS coverage, and completion of NEPA, ESA, and cultural resources requirements.

  14. Uncertainty in Various Habitat Suitability Models and Its Impact on Habitat Suitability Estimates for Fish

    Directory of Open Access Journals (Sweden)

    Yu-Pin Lin

    2015-07-01

    Full Text Available Species distribution models (SDMs are extensively used to project habitat suitability of species in stream ecological studies. Owing to complex sources of uncertainty, such models may yield projections with varying degrees of uncertainty. To better understand projected spatial distributions and the variability between habitat suitability projections, this study uses five SDMs that are based on the outputs of a two-dimensional hydraulic model to project the suitability of habitats and to evaluate the degree of variability originating from both differing model types and the split-sample procedure. The habitat suitability index (HSI of each species is based on two stream flow variables, including current velocity (V, water depth (D, as well as the heterogeneity of these flow conditions as quantified by the information entropy of V and D. The six SDM approaches used to project fish abundance, as represented by HSI, included two stochastic models: the generalized linear model (GLM and the generalized additive model (GAM; as well as three machine learning models: the support vector machine (SVM, random forest (RF and the artificial neural network (ANN, and an ensemble model (where the latter is the average of the preceding five models. The target species Sicyopterus japonicas was found to prefer habitats with high current velocities. The relationship between mesohabitat diversity and fish abundance was indicated by the trends in information entropy and weighted usable area (WUA over the study area. This study proposes a method for quantifying habitat suitability, and for assessing the uncertainties in HSI and WUA that are introduced by the various SDMs and samples. This study also demonstrated both the merits of the ensemble modeling approach and the necessity of addressing model uncertainty.

  15. Structure and function of fish communities in the southern Lake Michigan basin with emphasis on restoration of native fish communities

    Science.gov (United States)

    Simon, Thomas P.; Stewart, Paul M.

    1999-01-01

    The southern Lake Michigan basin in northwest Indiana possesses a variety of aquatic habitats including riverine, palustrine, and lacustrine systems. The watershed draining this area is a remnant of glacial Lake Chicago and supports fish communities that are typically low in species richness. Composition of the presettlement Lake Michigan fish community near the Indiana Dunes has been difficult to reconstruct. Existing data indicate that the number of native species in the Lake Michigan watershed, including nearshore Lake Michigan, has declined by 22% since the onset of European settlement. Few remnants of natural fish communities exist, and those occur principally in the ponds of Miller Woods, the Grand Calumet Lagoons, and the Little Calumet River. These communities have maintained a relatively diverse assemblage of fishes despite large-scale anthropogenic disturbances in the area, including channelization, massive river redirection, fragmentation, habitat alteration, exotic species invasions, and the introduction of toxic chemicals. Data that we collected from 1985 to 1996 suggested that the Grand Calumet River has the highest proportion of exotic fish species of any inland wetland in northwest Indiana. Along the Lake Michigan shoreline, another group of exotics (e.g., round goby, alewife, and sea lamprey) have affected the structure of native fish communities, thereby altering lake ecosystem function. Stocking programs contribute to the impairment of native communities. Nonindigenous species have restructured the function of Lake Michigan tributaries, causing disruptions in trophic dynamics, guild structure, and species diversity. Several fish communities have been reduced or eliminated by the alteration and destruction of spawning and nursery areas. Degradation of habitats has caused an increase in numbers and populations of species able to tolerate and flourish when confronted with hydrologic alteration. Fish communities found on public lands in northwest

  16. Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan for Fiscal Year 1994.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration; Northwest Power Planning Council (U.S.); Columbia Basin Fish and Wildlife Authority

    1994-02-01

    This document is part of Bonneville Power Administration`s program to protect, mitigate, and enhance fish and wildlife affected by the development and operation of hydroelectric facilities on the Columbia River and its tributaries. The Fiscal Year 1994 (FY 1994) Annual Implementation Work Plan (AIWP) presents Bonneville Power Administration`s (BPA`s) plan for implementation of the Columbia River Basin Fish and Wildlife Program (Program). The purpose of the Program is to guide BPA and other federal agencies in carrying out their responsibilities to protect, mitigate, and enhance fish and wildlife in the Columbia River Basin. Phase I began the work of salmon recovery with certain fast-track measures completed in August 1991. Phase II dealt with Snake and Columbia river flow and salmon harvest and was completed in December 1991. Phase III dealt with system-wide habitat and salmon production issues and was completed in September 1992. Phase IV planning, focusing on resident fish and wildlife, began in August 1993, and was finished and adopted in November 1993. This report provides summaries of the ongoing and new projects for FY 1994 within the areas of juvenile migration, adult migration, salmon harvest, production and habitat, coordinated implementation, monitoring and evaluation, resident fish, and wildlife.

  17. A Comparative Study of Fish Assemblages Near Aquaculture, Artificial and Natural Habitats

    Institute of Scientific and Technical Information of China (English)

    WANG Zhenhua; CHEN Yong; ZHANG Shouyu; WANG Kai; ZHAO Jing; XU Qiang

    2015-01-01

    Habitat plays a critical role in regulating fish community structure. Using the data collected from a monthly trammel net survey in Ma’an archipelago off the east coast of China, we evaluated impacts of five different habitats (artificial reefs, mussel farms, cage aquaculture, rocky reefs and soft bottom) on fish assemblages. This study suggests that artificial reefs (AR) have significantly higher species richness, abundance and diversity than mussel farms (MF) or soft bottom (SB) habitats during most seasons, and that fish taxa in the AR habitats are similar to those in the rocky reef (RR) habitats. Two different fish assemblage patterns were revealed in the study area using non-metric multidimensional scaling ordination: an assemblage dominated by reef fishes (especially by Scor-paenidae species) in AR, RR and cage aquaculture (CA) habitats and an assemblage dominated by Sciaenidae species in MF and SB habitats. We suggest that reef fishes play a key role in differentiating fish community structures in the study area. Although few dif-ferences in fish abundance and diversity were found between the CA and SB habitats, a more diverse age structure was observed in the CA habitats. A much more complex fish assemblage and enhanced population of local species were established as a result of the presence of both floating and fixed artificial structures, probably through improved survival rates.

  18. Dynamic hypoxic zones in Lake Erie compress fish habitat, altering vulnerability to fishing gears

    Science.gov (United States)

    Kraus, Richard T.; Knight, Carey T.; Farmer, Troy M.; Gorman, Ann Marie; Collingsworth, Paris D.; Warren, Glenn J.; Kocovsky, Patrick M.; Conroy, Joseph D.

    2015-01-01

    Seasonal degradation of aquatic habitats from hypoxia occurs in numerous freshwater and coastal marine systems and can result in direct mortality or displacement of fish. Yet, fishery landings from these systems are frequently unresponsive to changes in the severity and extent of hypoxia, and population-scale effects have been difficult to measure except in extreme hypoxic conditions with hypoxia-sensitive species. We investigated fine-scale temporal and spatial variability in dissolved oxygen in Lake Erie as it related to fish distribution and catch efficiencies of both active (bottom trawls) and passive (trap nets) fishing gears. Temperature and dissolved oxygen loggers placed near the edge of the hypolimnion exhibited much higher than expected variability. Hypoxic episodes of variable durations were frequently punctuated by periods of normoxia, consistent with high-frequency internal waves. High-resolution interpolations of water quality and hydroacoustic surveys suggest that fish habitat is compressed during hypoxic episodes, resulting in higher fish densities near the edges of hypoxia. At fixed locations with passive commercial fishing gear, catches with the highest values occurred when bottom waters were hypoxic for intermediate proportions of time. Proximity to hypoxia explained significant variation in bottom trawl catches, with higher catch rates near the edge of hypoxia. These results emphasize how hypoxia may elevate catch rates in various types of fishing gears, leading to a lack of association between indices of hypoxia and fishery landings. Increased catch rates of fish at the edges of hypoxia have important implications for stock assessment models that assume catchability is spatially homogeneous.

  19. Ensemble forecasting of potential habitat for three invasive fishes

    Science.gov (United States)

    Poulos, Helen M.; Chernoff, Barry; Fuller, Pam L.; Butman, David

    2012-01-01

    Aquatic invasive species pose major ecological and economic threats to aquatic ecosystems worldwide via displacement, predation, or hybridization with native species and the alteration of aquatic habitats and hydrologic cycles. Modeling the habitat suitability of alien aquatic species through spatially explicit mapping is an increasingly important risk assessment tool. Habitat modeling also facilitates identification of key environmental variables influencing invasive species distributions. We compared four modeling methods to predict the potential continental United States distributions of northern snakehead Channa argus (Cantor, 1842), round goby Neogobius melanostomus (Pallas, 1814), and silver carp Hypophthalmichthys molitrix (Valenciennes, 1844) using maximum entropy (Maxent), the genetic algorithm for rule set production (GARP), DOMAIN, and support vector machines (SVM). We used inventory records from the USGS Nonindigenous Aquatic Species Database and a geographic information system of 20 climatic and environmental variables to generate individual and ensemble distribution maps for each species. The ensemble maps from our study performed as well as or better than all of the individual models except Maxent. The ensemble and Maxent models produced significantly higher accuracy individual maps than GARP, one-class SVMs, or DOMAIN. The key environmental predictor variables in the individual models were consistent with the tolerances of each species. Results from this study provide insights into which locations and environmental conditions may promote the future spread of invasive fish in the US.

  20. Fish Distribution in Far Western Queensland, Australia: The Importance of Habitat, Connectivity and Natural Flows

    Directory of Open Access Journals (Sweden)

    Adam Kerezsy

    2014-06-01

    Full Text Available The endorheic Lake Eyre Basin drains 1.2 million square kilometres of arid central Australia, yet provides habitat for only 30 species of freshwater fish due to the scarcity of water and extreme climate. The majority are hardy riverine species that are adapted to the unpredictable flow regimes, and capable of massive population booms following heavy rainfall and the restoration of connectivity between isolated waterholes. The remainder are endemic specialists from isolated springs with very restricted ranges, and many are listed under relevant state and national endangered species legislation and also by the International Union for Conservation of Nature (IUCN. For these spring communities, which are sustained by water from the Great Artesian Basin, survival is contingent on suitable habitat persisting alongside extractive mining, agriculture and the imposition of alien species. For the riverine species, which frequently undertake long migrations into ephemeral systems, preservation of the natural flow regime is paramount, as this reinstates riverine connectivity. In this study, fish were sampled from the Bulloo River in the east to the Mulligan River in the west, along a temporal timeframe and using a standard set of sampling gears. Fish presence was influenced by factors such as natural catchment divides, sampling time, ephemerality and the occurrence of connection flows and flooding. Despite the comparatively low diversity of species, the aquatic systems of this isolated region remain in good ecological condition, and as such they offer excellent opportunities to investigate the ecology of arid water systems. However, the presence of both endangered species (in the springs and invasive and translocated species more widely indicates that active protection and management of this unique area is essential to maintain biodiversity and ecosystem integrity.

  1. Alien fish species in the Mediterranean – Black Sea Basin

    OpenAIRE

    ORAL, Muammer

    2010-01-01

    Abstract Alien Fish (Synonyms: non-native, non-indigenous, allochthonous, and exotic) species have been introduced to the Mediterranean-Black Sea Basin via the Suez Canal, Gibraltar or in ballast water. The number of alien fish species increased recently in the Black Sea-Mediterranean Basin because of the opening of the Suez Canal, climate change and international shipping activities. The aim of this review is to compile all relevant data for the alien fish species in both the Black and the M...

  2. Persistence at distributional edges: Columbia spotted frog habitat in the arid Great Basin, USA.

    Science.gov (United States)

    Arkle, Robert S; Pilliod, David S

    2015-09-01

    A common challenge in the conservation of broadly distributed, yet imperiled species is understanding which factors facilitate persistence at distributional edges, locations where populations are often vulnerable to extirpation due to changes in climate, land use, or distributions of other species. For Columbia spotted frogs (Rana luteiventris) in the Great Basin (USA), a genetically distinct population segment of conservation concern, we approached this problem by examining (1) landscape-scale habitat availability and distribution, (2) water body-scale habitat associations, and (3) resource management-identified threats to persistence. We found that areas with perennial aquatic habitat and suitable climate are extremely limited in the southern portion of the species' range. Within these suitable areas, native and non-native predators (trout and American bullfrogs [Lithobates catesbeianus]) are widespread and may further limit habitat availability in upper- and lower-elevation areas, respectively. At the water body scale, spotted frog occupancy was associated with deeper sites containing abundant emergent vegetation and nontrout fish species. Streams with American beaver (Castor canadensis) frequently had these structural characteristics and were significantly more likely to be occupied than ponds, lakes, streams without beaver, or streams with inactive beaver ponds, highlighting the importance of active manipulation of stream environments by beaver. Native and non-native trout reduced the likelihood of spotted frog occupancy, especially where emergent vegetation cover was sparse. Intensive livestock grazing, low aquatic connectivity, and ephemeral hydroperiods were also negatively associated with spotted frog occupancy. We conclude that persistence of this species at the arid end of its range has been largely facilitated by habitat stability (i.e., permanent hydroperiod), connectivity, predator-free refugia, and a commensalistic interaction with an ecosystem

  3. Assessment of Salmonids and their Habitat Conditions in the Walla Walla River Basin within Washington, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Mendel, Glen Wesley; Trump, Jeremy; Karl, David

    2002-12-01

    Concerns about the decline of native salmon and trout populations have increased among natural resource managers and the public in recent years. As a result, a multitude of initiatives have been implemented at the local, state, and federal government levels. These initiatives include management plans and actions intended to protect and restore salmonid fishes and their habitats. In 1998 bull trout (Salvelinus confluentus) were listed under the Endangered Species Act (ESA), as ''Threatened'', for the Walla Walla River and its tributaries. Steelhead (Oncorhynchus mykiss) were listed as ''Threatened'' in 1999 for the mid-Columbia River and its tributaries. These ESA listings emphasize the need for information about these threatened salmonid populations and their habitats. The Washington Department of Fish and Wildlife (WDFW) is entrusted with ''the preservation, protection, and perpetuation of fish and wildlife....[and to] maximize public recreational or commercial opportunities without impairing the supply of fish and wildlife (WAC 77.12.010).'' In consideration of this mandate, the WDFW submitted a proposal in December 1997 to the Bonneville Power Administration (BPA) for a study to assess salmonid distribution, relative abundance, genetics, and the condition of salmonid habitats in the Walla Walla River basin. The primary purposes of this project are to collect baseline biological and habitat data, to identify major data gaps, and to draw conclusions whenever possible. The study reported herein details the findings of the 2001 field season (March to November, 2001).

  4. Assessment of salmonids and their habitat conditions in the Walla Walla River Basin of Washington : 2000 annual report; ANNUAL

    International Nuclear Information System (INIS)

    Concerns about the decline of native salmon and trout populations have increased among natural resource managers and the public in recent years. As a result, a multitude of initiatives have been implemented at the local, state, and federal government levels. These initiatives include management plans and actions intended to protect and restore salmonid fishes and their habitats. In 1998 bull trout were listed under the Endangered Species Act (ESA), as ''Threatened'', for the Walla Walla River and its tributaries. Steelhead were listed as ''Threatened'' in 1999 for the mid-Columbia River and its tributaries. These ESA listings emphasize the need for information about the threatened salmonid populations and their habitats. The Washington Department of Fish and Wildlife (WDFW) is entrusted with ''the preservation, protection, and perpetuation of fish and wildlife....[and to] maximize public recreational or commercial opportunities without impairing the supply of fish and wildlife (WAC 77.12.010).'' In consideration of this mandate, the WDFW submitted a proposal in December 1997 to the Bonneville Power Administration (BPA) for a study to assess salmonid distribution, relative abundance, genetics, and the condition of their habitats in the Walla Walla River basin. The primary purposes of this project are to collect baseline biological and habitat data, to identify major data gaps, and to draw conclusions whenever possible. The study reported herein details the findings of the 2000 field season (March to November, 2000)

  5. Assessment of Salmonids and their Habitat Conditions in the Walla Walla River Basin of Washington : 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Mendel, Glen Wesley; Karl, David; Coyle, Terrence

    2001-11-01

    Concerns about the decline of native salmon and trout populations have increased among natural resource managers and the public in recent years. As a result, a multitude of initiatives have been implemented at the local, state, and federal government levels. These initiatives include management plans and actions intended to protect and restore salmonid fishes and their habitats. In 1998 bull trout were listed under the Endangered Species Act (ESA), as ''Threatened'', for the Walla Walla River and its tributaries. Steelhead were listed as ''Threatened'' in 1999 for the mid-Columbia River and its tributaries. These ESA listings emphasize the need for information about the threatened salmonid populations and their habitats. The Washington Department of Fish and Wildlife (WDFW) is entrusted with ''the preservation, protection, and perpetuation of fish and wildlife....[and to] maximize public recreational or commercial opportunities without impairing the supply of fish and wildlife (WAC 77. 12.010).'' In consideration of this mandate, the WDFW submitted a proposal in December 1997 to the Bonneville Power Administration (BPA) for a study to assess salmonid distribution, relative abundance, genetics, and the condition of their habitats in the Walla Walla River basin. The primary purposes of this project are to collect baseline biological and habitat data, to identify major data gaps, and to draw conclusions whenever possible. The study reported herein details the findings of the 2000 field season (March to November, 2000).

  6. Fishes in Mangrove Prop-root Habitats of Northeastern Florida Bay: Distinct Assemblages across an Estuarine Gradient

    Science.gov (United States)

    Ley, J. A.; McIvor, C. C.; Montague, C. L.

    1999-06-01

    Seasonal changes in freshwater inflow and other environmental conditions may induce changes in density and species composition of mangrove fishes along estuarine gradients. Fishes within mangrove habitats in a subtropical estuary were sampled monthly from May 1989 to May 1990, using block nets with rotenone and visual censuses. At 18 stations, temperature ranged from 22 to 34°C, depth from 10 to 104cm and underwater visibility from 1 to 13m. Salinity ranged from 0 to 60 upstream, and 35 to 54 mid- and downstream. A total of 573191 individuals (76 species) was observed or collected, with an average density of 6·5 fish m -2. Engraulidae, Atherinidae, Poeciliidae and Cyprinodontidae numerically dominated the assemblage. Distinct assemblages occurred up-, mid- and downstream and maintained coherent groups in these gradient positions over the seasons. Residents totalled 94·5% of the individuals, estuarine transients comprised 5·1% and occasional marine visitors were less than 0·4%. Densities of resident fishes peaked in winter as temperatures and water levels fell, uncorrelated with changes in salinity. These observations suggest that mangrove habitats may sustain diverse and abundant fish communities dominated by euryhaline residents. Although estuarine transients were consistently rare in upstream sub-basins, downstream were found numerous sub-adults of species occurring as adults on nearby reefs (Lutjanidae, Haemulidae). Thus, reef-associated estuarine transients may be abundant in mangrove habitats having near-marine salinities. Contrary to expectations, mangrove habitats in northeastern Florida bay did not function as a nursery as defined under the nursery-ground paradigm: young-of-the-year juveniles of estuarine transient species did not seek low salinity sub-basins. However, northeastern Florida Bay may not be representative of most mangrove estuaries as the area: (1) is without lunar tides and related circulation; (2) has low and variable amounts of

  7. Dams in the Mekong River Basin: Options for Improved Sediment and Fish Passage

    Science.gov (United States)

    Wild, T. B.; Loucks, D. P.

    2014-12-01

    The Mekong River and its tributaries comprise one of the most productive fish habitats in the world today. The economic value of the Mekong fishery in Lao PDR, Cambodia and Vietnam is among the highest in the world, providing income and food security to tens of millions of people. However, the construction of multiple dams in the basin will reduce sediment discharge, which will adversely impact nutrient transport and habitat quality and availability, and disrupt fish migration routes. Thus, of considerable interest is the identification of alternatives to the location, design and operation of planned hydropower dams that could improve sediment passage, enable migratory fish passage, and sustain fish production for local use. This paper describes the results of simulation studies designed to identify and evaluate such alternatives, as well as their potential impact on hydropower production. Dam sites in Cambodia and Lao PDR on tributaries and on the mainstream Mekong River will be discussed. Evaluations of sediment management techniques such as flushing, sluicing and bypassing will be discussed. This study is intended to inform decision makers in Cambodia, Lao PDR and Vietnam about potential alternatives to current plans as they prepare decisions regarding the development of over 100 hydropower dams throughout the basin.

  8. Migratory bird populations and habitat relationships in Malheur-Harney Lakes Basin Oregon

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This biological study is one of four study elements outlined in the Fish and Wildlife Service's plan of study for the Malheur-Harney Lakes Basin, Oregon (July 1972,...

  9. John Day River Subbasin Fish Habitat Enhancement Project, 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Powell, Russ M.; Jerome, James P.; Delano, Kenneth H.

    2003-03-01

    Work undertaken in 2002 included: (1) Seven new fence projects were completed thereby protecting 6.0 miles of stream (2) Completion of 0.7 miles of dredge tail leveling on Granite Creek. (3) New fence construction (300ft) plus one watergap on Indian Creek/ Kuhl property. (4) Maintenance of all active project fences (58.76 miles), watergaps (56), spring developments (32) and plantings were checked and repairs performed. (5) Restoration and Enhancement projects protected 3 miles of stream within the basin. (6) Since the initiation of the Fish Habitat Project in 1984 we have 67.21 miles of stream protected using 124.2 miles of fence. With the addition of the Restoration and Enhancement Projects we have 199.06 miles of fence protecting 124.57 miles of stream.

  10. Defining critical habitats of threatened and endemic reef fishes with a multivariate approach.

    Science.gov (United States)

    Purcell, Steven W; Clarke, K Robert; Rushworth, Kelvin; Dalton, Steven J

    2014-12-01

    Understanding critical habitats of threatened and endemic animals is essential for mitigating extinction risks, developing recovery plans, and siting reserves, but assessment methods are generally lacking. We evaluated critical habitats of 8 threatened or endemic fish species on coral and rocky reefs of subtropical eastern Australia, by measuring physical and substratum-type variables of habitats at fish sightings. We used nonmetric and metric multidimensional scaling (nMDS, mMDS), Analysis of similarities (ANOSIM), similarity percentages analysis (SIMPER), permutational analysis of multivariate dispersions (PERMDISP), and other multivariate tools to distinguish critical habitats. Niche breadth was widest for 2 endemic wrasses, and reef inclination was important for several species, often found in relatively deep microhabitats. Critical habitats of mainland reef species included small caves or habitat-forming hosts such as gorgonian corals and black coral trees. Hard corals appeared important for reef fishes at Lord Howe Island, and red algae for mainland reef fishes. A wide range of habitat variables are required to assess critical habitats owing to varied affinities of species to different habitat features. We advocate assessments of critical habitats matched to the spatial scale used by the animals and a combination of multivariate methods. Our multivariate approach furnishes a general template for assessing the critical habitats of species, understanding how these vary among species, and determining differences in the degree of habitat specificity. PMID:25302855

  11. [Estimation of spur dike-affected fish habitat area].

    Science.gov (United States)

    Ray-Shyan, Wu; Yan-Ru, Chen; Yi-Liang, Ge

    2012-04-01

    Based on the HEC-RAS and River 2D modes, and taking 5% change rate of weighted usable area (WUA) as the threshold to define the spur dike- affected area of target fish species Acrossocheilus paradoxus in Fazi River in Taiwan, this paper studied the affected area of the fish habitat by spur dike, and, in combining with the references about the installations of spur dikes in Taiwan in recent 10 years, analyzed the relative importance of related affecting factors such as dike height, dike length (water block rate), average slope gradient of river way, single or double spur dike, and flow discharge. In spite of the length of the dike, the affected area in downstream was farther, and was about 2-6 times as large as that in upstream. The ratio of the affected area in downstream / upstream decreased with increasing slope gradient, but increased with increasing dike length and flow discharge. When the discharge was approximate to 10 years return periods, the ratio of the affected area would be close to a constant of 2. Building double spur dike would produce a better WUA than building single spur dike.

  12. Summary Report for Bureau of Fisheries Stream Habitat Surveys : Umatilla, Tucannon, Asotin, and Grande Ronde River Basins, 1934-1942, Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    McIntosh, Bruce A.; Clark, Sharon E.; Sedell, James R.

    1995-01-01

    This document contains summary reports of stream habitat surveys, conducted in the Umatilla and Grande Ronde River basins, by the Bureau of Fisheries (BOF, now National Marine Fisheries Service) from 1938-1942. These surveys were part of a larger project to survey streams in the Columbia River basin that provided, or had provided, spawning and rearing habitat for salmon and steelhead (Rich, 1948). The purpose of the survey was, as described by Rich, 'to determine the present condition of the various tributaries with respect to their availability and usefulness for the migration, breeding, and rearing of migratory fishes'. Current estimates of the loss of anadromous fish habitat in the Columbia River Basin are based on a series of reports published from 1949-1952 by the U.S. Fish and Wildlife Service. The reports were brief, qualitative accounts of over 5000 miles of stream surveys conducted by the BOF from 1934-1946 (Bryant, 1949; Bryant and Parkhurst, 1950; Parkhurst, 1950a-c; Parkhurst et al 1950). Despite their brevity, these BOF reports have formed the basis for estimating fish habitat losses and conditions in the Columbia River Basin (Fulton, 1968, 1970; Thompson, 1976; NPPC, 1986). Recently, the field notebooks from the BOF surveys were discovered. The data is now archived and stored in the Forest Science DataBank at Oregon State University (Stafford et al., 1984; 1988). These records are the earliest and most comprehensive documentation available of the condition and extent of anadromous fish habitat before hydropower development in the Columbia River Basin. They provide the baseline data for quantifying changes and setting a benchmark for future restoration of anadromous fish habitat throughout the Basin. The summaries contained in this book are exact replicates of the originals. Due to discrepancies between the field data and the summaries, the database should be used to assess pool and substrate conditions. This data is available from the

  13. UV filters bioaccumulation in fish from Iberian river basins

    Energy Technology Data Exchange (ETDEWEB)

    Gago-Ferrero, Pablo [Dept. of Environmental Chemistry, Institute of Environmental Assessment and Water Research (IDAEA), Spanish Council for Scientific Research (CSIC), Jordi Girona 18-26, E-08034 Barcelona (Spain); Laboratory of Analytical Chemistry, Department of Chemistry, National and Kapodistrian University of Athens, Panepistimiopolis, 15771 Athens (Greece); Díaz-Cruz, M. Silvia, E-mail: sdcqam@cid.csic.es [Dept. of Environmental Chemistry, Institute of Environmental Assessment and Water Research (IDAEA), Spanish Council for Scientific Research (CSIC), Jordi Girona 18-26, E-08034 Barcelona (Spain); Barceló, Damià [Dept. of Environmental Chemistry, Institute of Environmental Assessment and Water Research (IDAEA), Spanish Council for Scientific Research (CSIC), Jordi Girona 18-26, E-08034 Barcelona (Spain); Catalan Institute for Water Research (ICRA), Parc Científic i Tecnològic de la Universitat de Girona, C/ Emili Grahit, 101 Edifici H2O, E-17003 Girona (Spain)

    2015-06-15

    The occurrence of eight organic UV filters (UV-Fs) was assessed in fish from four Iberian river basins. This group of compounds is extensively used in cosmetic products and other industrial goods to avoid the damaging effects of UV radiation, and has been found to be ubiquitous contaminants in the aquatic ecosystem. In particular, fish are considered by the scientific community to be the most feasible organism for contamination monitoring in aquatic ecosystems. Despite that, studies on the bioaccumulation of UV-F are scarce. In this study fish samples from four Iberian river basins under high anthropogenic pressure were analysed by liquid chromatography–tandem mass spectrometry (HPLC–MS/MS). Benzophenone-3 (BP3), ethylhexyl methoxycinnamate (EHMC), 4-methylbenzylidene camphor (4MBC) and octocrylene (OC) were the predominant pollutants in the fish samples, with concentrations in the range of ng/g dry weight (d.w.). The results indicated that most polluted area corresponded to Guadalquivir River basin, where maximum concentrations were found for EHMC (241.7 ng/g d.w.). Sediments from this river basin were also analysed. Lower values were observed in relation to fish for OC and EHMC, ranging from below the limits of detection to 23 ng/g d.w. Accumulation levels of UV-F in the fish were used to calculate biota-sediment accumulation factors (BSAFs). These values were always below 1, in the range of 0.04–0.3, indicating that the target UV-Fs are excreted by fish only to some extent. The fact that the highest concentrations were determined in predators suggests that biomagnification of UV-F may take place along the freshwater food web. - Highlights: • First evidence of UV filters in fish from Iberian rivers • Biota-sediment accumulation factors (BSAFs) were always below 1. • Predator species presented higher UV-F concentrations suggesting trophic magnification.

  14. UV filters bioaccumulation in fish from Iberian river basins

    International Nuclear Information System (INIS)

    The occurrence of eight organic UV filters (UV-Fs) was assessed in fish from four Iberian river basins. This group of compounds is extensively used in cosmetic products and other industrial goods to avoid the damaging effects of UV radiation, and has been found to be ubiquitous contaminants in the aquatic ecosystem. In particular, fish are considered by the scientific community to be the most feasible organism for contamination monitoring in aquatic ecosystems. Despite that, studies on the bioaccumulation of UV-F are scarce. In this study fish samples from four Iberian river basins under high anthropogenic pressure were analysed by liquid chromatography–tandem mass spectrometry (HPLC–MS/MS). Benzophenone-3 (BP3), ethylhexyl methoxycinnamate (EHMC), 4-methylbenzylidene camphor (4MBC) and octocrylene (OC) were the predominant pollutants in the fish samples, with concentrations in the range of ng/g dry weight (d.w.). The results indicated that most polluted area corresponded to Guadalquivir River basin, where maximum concentrations were found for EHMC (241.7 ng/g d.w.). Sediments from this river basin were also analysed. Lower values were observed in relation to fish for OC and EHMC, ranging from below the limits of detection to 23 ng/g d.w. Accumulation levels of UV-F in the fish were used to calculate biota-sediment accumulation factors (BSAFs). These values were always below 1, in the range of 0.04–0.3, indicating that the target UV-Fs are excreted by fish only to some extent. The fact that the highest concentrations were determined in predators suggests that biomagnification of UV-F may take place along the freshwater food web. - Highlights: • First evidence of UV filters in fish from Iberian rivers • Biota-sediment accumulation factors (BSAFs) were always below 1. • Predator species presented higher UV-F concentrations suggesting trophic magnification

  15. Reef fishes of Saba Bank, Netherlands Antilles: assemblage structure across a gradient of habitat types.

    Directory of Open Access Journals (Sweden)

    Wes Toller

    Full Text Available Saba Bank is a 2,200 km(2 submerged carbonate platform in the northeastern Caribbean Sea off Saba Island, Netherlands Antilles. The presence of reef-like geomorphic features and significant shelf edge coral development on Saba Bank have led to the conclusion that it is an actively growing, though wholly submerged, coral reef atoll. However, little information exists on the composition of benthic communities or associated reef fish assemblages of Saba Bank. We selected a 40 km(2 area of the bank for an exploratory study. Habitat and reef fish assemblages were investigated in five shallow-water benthic habitat types that form a gradient from Saba Bank shelf edge to lagoon. Significant coral cover was restricted to fore reef habitat (average cover 11.5% and outer reef flat habitat (2.4% and declined to near zero in habitats of the central lagoon zone. Macroalgae dominated benthic cover in all habitats (average cover: 32.5--48.1% but dominant algal genera differed among habitats. A total of 97 fish species were recorded. The composition of Saba Bank fish assemblages differed among habitat types. Highest fish density and diversity occurred in the outer reef flat, fore reef and inner reef flat habitats. Biomass estimates for commercially valued species in the reef zone (fore reef and reef flat habitats ranged between 52 and 83 g/m(2. The composition of Saba Bank fish assemblages reflects the absence of important nursery habitats, as well as the effects of past fishing. The relatively high abundance of large predatory fish (i.e. groupers and sharks, which is generally considered an indicator of good ecosystem health for tropical reef systems, shows that an intact trophic network is still present on Saba Bank.

  16. Impact of sampling efficiency on the performance of data-driven fish habitat models

    OpenAIRE

    Mouton, A.M.; Dillen, A.; Van den Neucker, T.; Buysse, D.; STEVENS, M.; Coeck, J.

    2012-01-01

    In the last decades, aquatic habitat modelling has gained more attention due to its relevance to river management, restoration and conservation biology. Although numerous habitat suitability models have been developed based on ecological data, data quality is often a key, but overlooked issue in the development of such models. This paper analysed the impact of sampling efficiency on the quality of data-driven habitat suitability models. Therefore, models were derived from fish habitat data ob...

  17. Trophic behaviour of juvenile reef fishes inhabiting interlinked mangrove-seagrass habitats in offshore mangrove islets

    Science.gov (United States)

    Mangroves are essential fish habitats acting as shelters and nurseries, but the relative contribution of mangrove resources to fish diets relies on site-specific context and fish life history stage. Stable isotope (δ13C, δ15N) and gut-content analyses were used to investigate siz...

  18. Hood River Production Program : Hood River Fish Habitat Protection, Restoration, and Monitoring Plan.

    Energy Technology Data Exchange (ETDEWEB)

    Coccoli, Holly; Lambert, Michael

    2000-02-01

    Effective habitat protection and rehabilitation are essential to the long-term recovery of anadromous fish populations in the Hood River subbasin. This Habitat Protection, Restoration, and Monitoring Plan was prepared to advance the goals of the Hood River Production Program (HRRP) which include restoring self-sustaining runs of spring chinook salmon and winter and summer steelhead. The HRPP is a fish supplementation and monitoring and evaluation program initiated in 1991 and funded by the Bonneville Power Administration (BPA) as part of the Northwest Power Planning Council Fish and Wildlife Program. The HRPP is a joint effort of the Confederated Tribes of the Warm Springs Reservation of Oregon (CTWSRO) and Oregon Department of Fish and Wildlife (ODFW). Using recent watershed assessment and federal watershed analysis reports, this Plan reviews the historic and current condition of riparian, instream and upland habitats; natural watershed processes; anadromous and resident fish populations; identifies limiting factors, and indicates those subbasin areas that need protection or are likely to respond to restoration. Primary habitat restoration needs were identified as (1) improved fish screening and upstream adult passage at water diversions; (2) improved spawning gravel availability, instream habitat structure and diversity; and (3) improved water quality and riparian conditions. While several early action projects have been initiated in the Hood River subbasin since the mid 1990s, this Plan outlines additional projects and strategies needed to protect existing high quality habitat, correct known fish survival problems, and improve the habitat capacity for natural production to meet HRPP goals.

  19. Summary Report for Bureau of Fisheries Stream Habitat Surveys : Clearwater, Salmon, Weiser, and Payette River Basins, 1934-1942, Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    McIntosh, Bruce A.; Clark, Sharon E.; Sedell, James R.

    1995-01-01

    This document contains summary reports of stream habitat surveys, conducted in Idaho, by the Bureau of Fisheries (BOF, now National Marine Fisheries Service) from 1938-1942.. These surveys were part of a larger project to survey streams in the Columbia River basin that provided, or had provided, spawning and rearing habitat for salmon and steelhead (Rich, 1948). The purpose of the survey was, as described by Rich, 'to determine the present condition of the various tributaries with respect to their availability and usefulness for the migration, breeding, and rearing of migratory fishes'. The Idaho portion of the survey consisted of extensive surveys of the Clearwater, Salmon, Weiser, and Payette River Subbasins. Current estimates of the loss of anadromous fish habitat in the Columbia River Basin are based on a series of reports published from 1949-1952 by the U.S. Fish and Wildlife Service. The reports were brief, qualitative accounts of over 5000 miles of stream surveys conducted by the BOF from 1934-1946 (Bryant, 1949; Bryant and Parkhurst, 1950; Parkhurst, 1950a-c; Parkhurst et al., 1950). Despite their brevity, these BOF reports have formed the basis for estimating fish habitat losses and conditions in the Columbia River Basin (Fulton, 1968, 1970; Thompson, 1976; NPPC, 1986). Recently, the field notebooks from the BOF surveys were discovered. The data is now archived and stored in the Forest Science DataBank at Oregon State University (Stafford et al., 1984; 1988). These records are the earliest and most comprehensive documentation available of the condition and extent of anadromous fish habitat before hydropower development in the Columbia River Basin. They provide the baseline data for quantifying changes and setting a benchmark for future restoration of anadromous fish habitat throughout the Basin. The summaries contained in this book are exact replicates of the originals. Due to discrepancies between the field data and the summaries, the database

  20. A Multiple Watershed Approach to Assessing the Effects of Habitat Restoration Actions on Anadromous and Resident Fish Populations, Technical Report 2003-2004.

    Energy Technology Data Exchange (ETDEWEB)

    Marmorek, David

    2004-03-01

    Habitat protection and restoration is a cornerstone of current strategies to restore ecosystems, recover endangered fish species, and rebuild fish stocks within the Columbia River Basin. Strategies featuring habitat restoration include the 2000 Biological Opinion on operation of the Federal Columbia River Power System (FCRPS BiOp) developed by the National Marine Fisheries Service (NMFS), the 2000 Biological Opinion on Bull Trout developed by the US Fish and Wildlife Service (USFWS), and Sub-Basin Plans developed under the Fish and Wildlife Program of the Northwest Power and Conservation Council (NWPCC). There is however little quantitative information about the effectiveness of different habitat restoration techniques. Such information is crucial for helping scientists and program managers allocate limited funds towards the greatest benefits for fish populations. Therefore, it is critical to systematically test the hypotheses underlying habitat restoration actions for both anadromous and resident fish populations. This pilot project was developed through a proposal to the Innovative Projects fund of the NWPCC (ESSA 2002). It was funded by the Bonneville Power Administration (BPA) following reviews by the Independent Scientific Review Panel (ISRP 2002), the Columbia Basin Fish and Wildlife Authority (CBFWA 2002), the NWPCC and BPA. The study was designed to respond directly to the above described needs for information on the effectiveness of habitat restoration actions, including legal measures specified in the 2000 FCRPS BiOp (RPA 183, pg. 9-133, NMFS 2000). Due to the urgency of addressing these measures, the timeline of the project was accelerated from a duration of 18 months to 14 months. The purpose of this pilot project was to explore methods for evaluating past habitat restoration actions and their effects on fish populations. By doing so, the project will provide a foundation of retrospective analyses, on which to build prospective, multi-watershed designs

  1. FishVis, A regional decision support tool for identifying vulnerabilities of riverine habitat and fishes to climate change in the Great Lakes Region

    Science.gov (United States)

    Stewart, Jana S.; Covert, S. Alex; Estes, Nick J.; Westenbroek, Stephen M.; Krueger, Damon; Wieferich, Daniel J.; Slattery, Michael T.; Lyons, John D.; McKenna, James E.; Infante, Dana M.; Bruce, Jennifer L.

    2016-10-13

    Climate change is expected to alter the distributions and community composition of stream fishes in the Great Lakes region in the 21st century, in part as a result of altered hydrological systems (stream temperature, streamflow, and habitat). Resource managers need information and tools to understand where fish species and stream habitats are expected to change under future conditions. Fish sample collections and environmental variables from multiple sources across the United States Great Lakes Basin were integrated and used to develop empirical models to predict fish species occurrence under present-day climate conditions. Random Forests models were used to predict the probability of occurrence of 13 lotic fish species within each stream reach in the study area. Downscaled climate data from general circulation models were integrated with the fish species occurrence models to project fish species occurrence under future climate conditions. The 13 fish species represented three ecological guilds associated with water temperature (cold, cool, and warm), and the species were distributed in streams across the Great Lakes region. Vulnerability (loss of species) and opportunity (gain of species) scores were calculated for all stream reaches by evaluating changes in fish species occurrence from present-day to future climate conditions. The 13 fish species included 4 cold-water species, 5 cool-water species, and 4 warm-water species. Presently, the 4 cold-water species occupy from 15 percent (55,000 kilometers [km]) to 35 percent (130,000 km) of the total stream length (369,215 km) across the study area; the 5 cool-water species, from 9 percent (33,000 km) to 58 percent (215,000 km); and the 4 warm-water species, from 9 percent (33,000 km) to 38 percent (141,000 km).Fish models linked to projections from 13 downscaled climate models projected that in the mid to late 21st century (2046–65 and 2081–2100, respectively) habitats suitable for all 4 cold-water species and 4

  2. Assessing Potential Conservation and Restoration Areas of Freshwater Fish Fauna in the Indian River Basins.

    Science.gov (United States)

    Bhatt, Jay P; Manish, Kumar; Mehta, Rajender; Pandit, Maharaj K

    2016-05-01

    Conservation efforts globally are skewed toward terrestrial ecosystems. To date, conservation of aquatic ecosystems, in particular fish fauna, is largely neglected. We provide a country-wide assessment of Indian river ecosystems in order to identify and prioritize areas for protection and restoration of freshwater fish fauna. Using various biodiversity and anthropogenic attributes, coupled with tools of ecological modeling, we delineated areas for fish fauna conservation and restoration in the 20 major river basins of India. To do this, we used prioritization analyses and reserve selection algorithms to derive conservation value index (CVI) and vulnerability index (VI) of the river basins. CVI was estimated using endemicity, rarity, conservation value, and taxonomic singularity, while VI was estimated using a disturbance index derived from percent geographic area of the basin under human settlements, human population density, predominant land use, and total number of exotic fish species in each basin. The two indices, CVI and VI, were converted into geo-referenced maps, and each map was super-imposed onto species richness and forest cover maps, respectively. After superimposition, areas with high CVI and low VI shade intensities were delineated for conservation, while areas with high CVI and high VI shade intensities were demarcated for restoration. In view of the importance of freshwater fish for human livelihoods and consumption, and ecosystems of India's rivers, we call for urgent attention to the conservation of their fish fauna along with restoration of their degraded habitats. PMID:26872885

  3. Assessing Potential Conservation and Restoration Areas of Freshwater Fish Fauna in the Indian River Basins.

    Science.gov (United States)

    Bhatt, Jay P; Manish, Kumar; Mehta, Rajender; Pandit, Maharaj K

    2016-05-01

    Conservation efforts globally are skewed toward terrestrial ecosystems. To date, conservation of aquatic ecosystems, in particular fish fauna, is largely neglected. We provide a country-wide assessment of Indian river ecosystems in order to identify and prioritize areas for protection and restoration of freshwater fish fauna. Using various biodiversity and anthropogenic attributes, coupled with tools of ecological modeling, we delineated areas for fish fauna conservation and restoration in the 20 major river basins of India. To do this, we used prioritization analyses and reserve selection algorithms to derive conservation value index (CVI) and vulnerability index (VI) of the river basins. CVI was estimated using endemicity, rarity, conservation value, and taxonomic singularity, while VI was estimated using a disturbance index derived from percent geographic area of the basin under human settlements, human population density, predominant land use, and total number of exotic fish species in each basin. The two indices, CVI and VI, were converted into geo-referenced maps, and each map was super-imposed onto species richness and forest cover maps, respectively. After superimposition, areas with high CVI and low VI shade intensities were delineated for conservation, while areas with high CVI and high VI shade intensities were demarcated for restoration. In view of the importance of freshwater fish for human livelihoods and consumption, and ecosystems of India's rivers, we call for urgent attention to the conservation of their fish fauna along with restoration of their degraded habitats.

  4. Tropical coastal habitats as surrogates of fish community structure, grazing, and fisheries value.

    Science.gov (United States)

    Harborne, Alastair R; Mumby, Peter J; Kappel, Carrie V; Dahlgren, Craig P; Micheli, Fiorenza; Holmes, Katherine E; Brumbaugh, Daniel R

    2008-10-01

    Habitat maps are frequently invoked as surrogates of biodiversity to aid the design of networks of marine reserves. Maps are used to maximize habitat heterogeneity in reserves because this is likely to maximize the number of species protected. However, the technique's efficacy is limited by intra-habitat variability in the species present and their abundances. Although communities are expected to vary among patches of the same habitat, this variability is poorly documented and rarely incorporated into reserve planning. To examine intra-habitat variability in coral-reef fishes, we generated a data set from eight tropical coastal habitats and six islands in the Bahamian archipelago using underwater visual censuses. Firstly, we provide further support for habitat heterogeneity as a surrogate of biodiversity as each predefined habitat type supported a distinct assemblage of fishes. Intra-habitat variability in fish community structure at scales of hundreds of kilometers (among islands) was significant in at least 75% of the habitats studied, depending on whether presence/absence, density, or biomass data were used. Intra-habitat variability was positively correlated with the mean number of species in that habitat when density and biomass data were used. Such relationships provide a proxy for the assessment of intra-habitat variability when detailed quantitative data are scarce. Intra-habitat variability was examined in more detail for one habitat (forereefs visually dominated by Montastraea corals). Variability in community structure among islands was driven by small, demersal families (e.g., territorial pomacentrid and labrid fishes). Finally, we examined the ecological and economic significance of intra-habitat variability in fish assemblages on Montastraea reefs by identifying how this variability affects the composition and abundances of fishes in different functional groups, the key ecosystem process of parrotfish grazing, and the ecosystem service of value of

  5. Perceptions of fish habitat conditions in Oklahoma tailwater fisheries: a survey of fisheries managers

    Science.gov (United States)

    Long, James M.

    2011-01-01

    While the downstream effects of dams on fish habitat have long been recognized, broad-scale assessments of tailwater fish habitat have rarely been conducted. In this paper, I report on the status of tailwater fisheries in Oklahoma as determined through a web-based survey of fisheries biologists with the Oklahoma Department of Wildlife Conservation conducted in July 2010. Respondents addressed 38 tailwaters, encompassing all major areas of the state. The majority of fish species comprising these fisheries included blue catfish (Ictalurus furcatus), followed by white bass (Morone chrysops), channel catfish (I. punctatus) and flathead catfish (Pylodictis olivaris). Most respondents indicated no or low concerns with fish habitat in tailwaters under their management supervision; only two tailwaters (Tenkiller Ferry and Fort Gibson) had the majority of concerns with fish habitat identified as high to moderately high. Principal components analysis and subsequent correlation analysis showed that tailwaters that scored high for issues related to shoreline erosion, change in water depth, flow fluctuations, and flow timing were associated with dams with large maximum discharge ability. No other factors related to fish habitat condition in tailwaters were found. In Oklahoma, dams with maximum discharge of at least 6,767.5 m3 sec–1 were more likely to have flow-related fish habitat concerns in the tailwater.

  6. Yakima River Basin Phase II Fish Screen Evaluations, 2002

    Energy Technology Data Exchange (ETDEWEB)

    Carter, Jessica A.; McMichael, Geoffrey A.; Chamness, Mickie A.

    2003-03-01

    In 2002, the Pacific Northwest National Laboratory evaluated 23 Phase II fish screen sites in the Yakima River Basin as part of a multi-year project for the Bonneville Power Administration on the effectiveness of fish screening devices. Pacific Northwest National Laboratory collected data to determine whether velocities in front of the screens and in the bypasses met National Marine Fisheries Service criteria to promote safe and timely fish passage and whether bypass outfall conditions allowed fish to safely return to the river. In addition, Pacific Northwest National Laboratory conducted underwater video surveys to evaluate the environmental and operational conditions of the screen sites with respect to fish passage. Based on evaluations in 2002, PNNL concluded that: (1) In general, water velocity conditions at the screen sites met fish passage criteria set by the National Marine Fisheries Service. (2) Conditions at most facilities would be expected to provide for safe juvenile fish passage. (3) Conditions at some facilities indicate that operation and/or maintenance should be modified to increase safe juvenile fish passage. (4) Automated cleaning brushes generally functioned properly; chains and other moving parts were typically well greased and operative. (5) Removal of sediment buildup and accumulated leafy and woody debris should be improved at some sites.

  7. Linkages between reef fish demographics and benthic habitat characteristics in Tutuila, American Samoa

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic habitats play vital roles in the distribution and abundances of marine resources. Understanding how fish populations respond to variability of benthic...

  8. AFSC/RACE/GAP/Yeung: Eastern Bering Sea Essential Fish Habitat Benthic Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Benthic samples were collected between 2009-2012 in the Bering Sea to study Essential Fish Habitat. Station locations were at or near fixed stations of the AFSC...

  9. Fish communities across a spectrum of habitats in the western Beaufort Sea and Chukchi Sea

    Science.gov (United States)

    Logerwell, E.; Busby, M.; Carothers, C.; Cotton, S.; Duffy-Anderson, J.; Farley, E.; Goddard, P.; Heintz, R.; Holladay, B.; Horne, J.; Johnson, S.; Lauth, B.; Moulton, L.; Neff, D.; Norcross, B.; Parker-Stetter, S.; Seigle, J.; Sformo, T.

    2015-08-01

    The increased scientific interest in the Arctic due to climate change and potential oil and gas development has resulted in numerous surveys of Arctic marine fish communities since the mid-2000s. Surveys have been conducted in nearly all Arctic marine fish habitats: from lagoons, beaches and across the continental shelf and slope. This provides an opportunity only recently available to study Arctic fish communities across a spectrum of habitats. We examined fish survey data from lagoon, beach, nearshore benthic, shelf pelagic and shelf benthic habitats in the western Beaufort Sea and Chukchi Sea. Specifically, we compare and contrast relative fish abundance and length (a proxy for age) among habitats and seas. We also examined ichthyoplankton presence/absence and abundance of dominant taxa in the shelf habitat. Our synthesis revealed more similarities than differences between the two seas. For example, our results show that the nearshore habitat is utilized by forage fish across age classes, and is also a nursery area for other species. Our results also indicated that some species may be expanding their range to the north, for example, Chinook Salmon. In addition, we documented the presence of commercially important taxa such as Walleye Pollock and flatfishes (Pleuronectidae). Our synthesis of information on relative abundance and age allowed us to propose detailed conceptual models for the life history distribution of key gadids in Arctic food webs: Arctic and Saffron Cod. Finally, we identify research gaps, such as the need for surveys of the surface waters of the Beaufort Sea, surveys of the lagoons of the Chukchi Sea, and winter season surveys in all areas. We recommend field studies on fish life history that sample multiple age classes in multiple habitats throughout the year to confirm, resolve and interpret the patterns in fish habitat use that we observed.

  10. Restoring Anadromous Fish Habitat in Big Canyon Creek Watershed; Anadromous Fish Habitat Restoration in the Nichols Canyon Subwatershed, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Koziol, Deb (Nez Perce Soil and Water Conservation District, Lewiston, ID)

    2001-02-01

    Nez Perce Soil & Water Conservation District (NPSWCD) undertook the Nichols Canyon Subwatershed Steelhead Trout Habitat Improvement Project in the spring of 1999 with funding from a grant through the Bonneville Power Administration. The Project's purpose is to install and implement agricultural best management practices (MBPS) and riparian restorations with the goal of improving steelhead trout spawning and rearing habitat in the subwatershed. Improvements to fish habitat in the Big Canyon Creek tributaries enhances natural production of the species in Big Canyon Creek and ultimately the Clearwater River. This report is a summation of the progress made by the NPSWCD in the Project's second year.

  11. Habitat selection by breeding waterbirds at ponds with size-structured fish populations

    Science.gov (United States)

    Kloskowski, Janusz; Nieoczym, Marek; Polak, Marcin; Pitucha, Piotr

    2010-07-01

    Fish may significantly affect habitat use by birds, either as their prey or as competitors. Fish communities are often distinctly size-structured, but the consequences for waterbird assemblages remain poorly understood. We examined the effects of size structure of common carp ( Cyprinus carpio) cohorts together with other biotic and abiotic pond characteristics on the distribution of breeding waterbirds in a seminatural system of monocultured ponds, where three fish age classes were separately stocked. Fish age corresponded to a distinct fish size gradient. Fish age and total biomass, macroinvertebrate and amphibian abundance, and emergent vegetation best explained the differences in bird density between ponds. Abundance of animal prey other than fish (aquatic macroinvertebrates and larval amphibians) decreased with increasing carp age in the ponds. Densities of ducks and smaller grebes were strongly negatively associated with fish age/size gradient. The largest of the grebes, the piscivorous great crested grebe ( Podiceps cristatus), was the only species that preferred ponds with medium-sized fish and was positively associated with total fish biomass. Habitat selection by bitterns and most rallids was instead strongly influenced by the relative amount of emergent vegetation cover in the ponds. Our results show that fish size structure may be an important cue for breeding habitat choice and a factor affording an opportunity for niche diversification in avian communities.

  12. Fish assemblage structure and habitat associations in a large western river system

    Science.gov (United States)

    Smith, C.D.; Quist, Michael; Hardy, R. S.

    2016-01-01

    Longitudinal gradients of fish assemblage and habitat structure were investigated in the Kootenai River of northern Idaho. A total of 43 500-m river reaches was sampled repeatedly with several techniques (boat-mounted electrofishing, hoop nets and benthic trawls) in the summers of 2012 and 2013. Differences in habitat and fish assemblage structure were apparent along the longitudinal gradient of the Kootenai River. Habitat characteristics (e.g. depth, substrate composition and water velocity) were related to fish assemblage structure in three different geomorphic river sections. Upper river sections were characterized by native salmonids (e.g. mountain whitefish Prosopium williamsoni), whereas native cyprinids (peamouth Mylocheilus caurinus, northern pikeminnow Ptychocheilus oregonensis) and non-native fishes (pumpkinseed Lepomis gibbosus, yellow perch Perca flavescens) were common in the downstream section. Overall, a general pattern of species addition from upstream to downstream sections was discovered and is likely related to increased habitat complexity and additions of non-native species in downstream sections. Assemblage structure of the upper sections were similar, but were both dissimilar to the lower section of the Kootenai River. Species-specific hurdle regressions indicated the relationships among habitat characteristics and the predicted probability of occurrence and relative abundance varied by species. Understanding fish assemblage structure in relation to habitat could improve conservation efforts of rare fishes and improve management of coldwater river systems.

  13. Effects of predation risk on habitat selection by water column fish, benthic fish and crayfish in stream pools

    Science.gov (United States)

    Magoulick, D.D.

    2004-01-01

    Predation risk can affect habitat selection by water column stream fish and crayfish, but little is known regarding effects of predation risk on habitat selection by benthic fish or assemblages of fish and crayfish. I used comparative studies and manipulative field experiments to determine whether, (1) habitat selection by stream fish and crayfish is affected by predation risk, and (2) benthic fish, water column fish, and crayfish differ in their habitat selection and response to predation risk. Snorkeling was used to observe fish and crayfish in, (1) unmanipulated stream pools with and without large smallmouth bass predators (Micropterus dolomieui >200 mm total length, TL) and (2) manipulated stream pools before and after addition of a single large smallmouth bass, to determine if prey size and presence of large fish predators affected habitat selection. Observations of microhabitat use were compared with microhabitat availability to determine microhabitat selection. Small fish (60-100 mm TL, except darters that were 30-100 mm TL) and crayfish (40-100 mm rostrum to telson length; TL) had significantly reduced densities in pools with large bass, whereas densities of large fish and crayfish (> 100 mm TL) did not differ significantly between pools with and without large bass. Small orangethroat darters (Etheostoma spectabile), northern crayfish (Orconectes virilis), and creek chubs (Semotilus atromaculatus) showed significantly greater densities in pools without large bass. The presence of large smallmouth bass did not significantly affect depths selected by fish and crayfish, except minnows, which were found significantly more often at medium depths when bass were present. Small minnows and large and small crayfish showed the greatest response to additions of bass to stream pools by moving away from bass locations and into shallow water. Small darters and sunfish showed an intermediate response, whereas large minnows showed no significant response to bass additions

  14. Assessment of River Habitat Quality in the Hai River Basin, Northern China

    OpenAIRE

    Yuekui Ding; Baoqing Shan; Yu Zhao

    2015-01-01

    We applied a river habitat quality (RHQ) assessment method to the Hai River Basin (HRB); an important economic centre in China; to obtain baseline information for water quality improvement; river rehabilitation; and watershed management. The results of the assessment showed that the river habitat in the HRB is seriously degraded. Specifically; 42.41% of the sites; accounting for a river length of 3.31 × 104 km; were designated poor and bad. Habitat in the plain areas is seriously deteriorated...

  15. Environmental drivers of fish functional diversity and composition in the Lower Colorado River Basin

    Science.gov (United States)

    Pool, T.K.; Olden, J.D.; Whittier, Joanna B.; Paukert, C.P.

    2010-01-01

    Freshwater conservation efforts require an understanding of how natural and anthropogenic factors shape the present-day biogeography of native and non-native species. This knowledge need is especially acute for imperiled native fishes in the highly modified Lower Colorado River Basin (LCRB), USA. In the present study we employed both a taxonomic and functional approach to explore how natural and human-related environmental drivers shape landscape-scale patterns of fish community composition in the LCRB. Our results showed that hydrologic alteration, watershed land use, and regional climate explained 30.3% and 44.7% of the total variation in fish community taxonomic and functional composition, respectively. Watersheds with greater dam densities and upstream storage capacity supported higher non-native functional diversity, suggesting that dams have provided additional "niche opportunities" for non-native equilibrium life-history strategists by introducing new reservoir habitat and modifying downstream flow and thermal regimes. By contrast, watersheds characterized by greater upstream land protection, lower dam densities, and higher variation in spring and summer precipitation supported fish communities with a strong complement of native species (opportunistic-periodic strategists). In conclusion, our study highlights the utility of a life-history approach to better understand the patterns and processes by which fish communities vary along environmental gradients.

  16. SETTING EXPECTATIONS FOR THE OHIO RIVER FISH INDEX BASED ON IN-STREAM HABITAT

    Science.gov (United States)

    The use of habitat criteria for setting fish community assessment expectations is common for streams, but a standard approach for great rivers remains largely undeveloped. We developed assessment expectations for the Ohio River Fish Index (ORFIN) based on measures of in-stream h...

  17. Cost-efficiency aspects for fish passage restoration in the Ruhr River Basin.

    Science.gov (United States)

    Weyand, M; Redeker, M; Nusch, E A

    2006-01-01

    The protection and sustainable management of the aquatic ecosystems is the central aim of the European Water Framework Directive. Due to the aspiration for good ecological status of the water bodies free fish passage will play an important part in river basin management. The Ruhr River has seen severe anthropogenic modifications due to urbanisation and industrialisation in the 19th and 20th centuries leading in the existence of approx. 1300 weirs within the Ruhr River Basin. The majority of the barriers are assessed as not passable or restricted passable. Against this background the Ruhrverband made a holistic approach towards restoring fish passage within the Ruhr catchment. Besides the scientific and technical aspects, such as the determination of potential (spawning) habitats and the development of measures in order to reach them, they also considered cost-benefit-ratio considerations for the Ruhr catchment as a whole as well as for site-specific designs of fish passage structures. Various benefits were evaluated taking into account different fields of economic interest. The model of financing all necessary measures should involve all responsible parties benefiting from the water utilizations. Such a mutual procedure delivers a fair cost distribution as well as an efficient implementation of measures.

  18. Assessment of brown trout habitat suitability in the Jucar River Basin (SPAIN): comparison of data-driven approaches with fuzzy-logic models and univariate suitability curves.

    Science.gov (United States)

    Muñoz-Mas, Rafael; Martínez-Capel, Francisco; Schneider, Matthias; Mouton, Ans M

    2012-12-01

    The implementation of the Water Framework Directive implies the determination of an environmental flow (E-flow) in each running water body. In Spain, many of the minimum flow assessments were determined with the physical habitat simulation system based on univariate habitat suitability curves. Multivariate habitat suitability models, widely applied in habitat assessment, are potentially more accurate than univariate suitability models. This article analyses the microhabitat selection by medium-sized (10-20 cm) brown trout (Salmo trutta fario) in three streams of the Jucar River Basin District (eastern Iberian Peninsula). The data were collected with an equal effort sampling approach. Univariate habitat suitability curves were built with a data-driven process for depth, mean velocity and substrate classes; three types of data-driven fuzzy models were generated with the FISH software: two models of presence-absence and a model of abundance. FISH applies a hill-climbing algorithm to optimize the fuzzy rules. A hydraulic model was calibrated with the tool River-2D in a segment of the Cabriel River (Jucar River Basin). The fuzzy-logic models and three methods to produce a suitability index from the three univariate curves were applied to evaluate the river habitat in the tool CASiMiR©. The comparison of results was based on the spatial arrangement of habitat suitability and the curves of weighted usable area versus discharge. The differences were relevant in different aspects, e.g. in the estimated minimum environmental flow according to the Spanish legal norm for hydrological planning. This work demonstrates the impact of the model's selection on the habitat suitability modelling and the assessment of environmental flows, based on an objective data-driven procedure; the conclusions are important for the water management in the Jucar River Basin and other river systems in Europe, where the environmental flows are a keystone for the achievement of the goals established

  19. Habitat dynamics, marine reserve status, and the decline and recovery of coral reef fish communities

    OpenAIRE

    Williamson, David H; Ceccarelli, Daniela M; Richard D. Evans; Jones, Geoffrey P.; Russ, Garry R

    2014-01-01

    Severe climatic disturbance events often have major impacts on coral reef communities, generating cycles of decline and recovery, and in some extreme cases, community-level phase shifts from coral-to algal-dominated states. Benthic habitat changes directly affect reef fish communities, with low coral cover usually associated with low fish diversity and abundance. No-take marine reserves (NTRs) are widely advocated for conserving biodiversity and enhancing the sustainability of exploited fish ...

  20. Habitat preferences of common native fishes in a tropical river in Southeastern Brazil

    Directory of Open Access Journals (Sweden)

    Marcus Rodrigues da Costa

    2013-01-01

    Full Text Available We determined in this study the habitat preferences of seven native fish species in a regulated river in Southeastern Brazil. We tested the hypothesis that fishes differ in habitat preference and that they use stretches of the river differing in hydraulic characteristics and substrate type. We surveyed fishes in four 1-km long river stretches encompassing different habitat traits, where we also measured water depth, velocity, and substrate type. We investigated preference patterns of four Siluriformes (Loricariichthys castaneus, Hoplosternum littorale, Pimelodus maculatus, and Trachelyopterus striatulus and three Characiformes (Astyanax aff. bimaculatus, Oligosarcus hepsetus, and Hoplias malabaricus, representing approximately 70% of the total number of fishes and 64% of the total biomass. We classified fishes into four habitat guilds: (1 a slow-flowing water guild that occupied mud-sand substrate, composed of two Siluriformes in either shallow ( 8 m, L. castaneus waters; (2 a run-dwelling guild that occurs in deep backwaters with clay-mud substrate, composed of the Characiformes A. aff. bimaculatus and O. hepsetus; (3 a run-dwelling guild that occurs in sandy and shallow substrate, composed of T. striatulus; and (4 a fast-flowing guild that occurs primarily along shorelines with shallow mud bottoms, composed of H. malabaricus and P. maculatus. Our hypothesis was confirmed, as different habitat preferences by fishes appear to occur in this regulated river.

  1. Differential mercury transfer in the aquatic food web of a double basined lake associated with selenium and habitat

    Science.gov (United States)

    Arcagni, Marina; Campbell, Linda; Arribére, María A.; Marvin-DiPasquale, Mark; Rizzo, Andrea; Guevara, Sergio Ribeiro

    2013-01-01

    Food web trophodynamics of total mercury (THg) and selenium (Se) were assessed for the double-basined ultraoligotrophic system of Lake Moreno, Patagonia. Each basin has differing proportions of littoral and pelagic habitats, thereby providing an opportunity to assess the importance of habitat (e.g. food web structure or benthic MeHg production) in the transfer of Hg and Se to top trophic fish species. Pelagic plankton, analyzed in three size classes (10–53, 53–200, and > 200 μm), had very high [THg], exceeding 200 μg g− 1 dry weight (DW) in the smallest, and a low ratio of MeHg to THg (0.1 to 3%). In contrast, [THg] in littoral macroinvertebrates showed lower values (0.3 to 1.8 μg g− 1 DW). Juvenile and small fish species feeding upon plankton had higher [THg] (0.2 to 8 μg g− 1 muscle DW) compared to large piscivore fish species (0.1 to 1.6 μg g− 1 muscle DW). Selenium concentrations exhibited a much narrower variation range than THg in the food web, varying from 0.5 to 2.7 μg g− 1 DW. Molar Se:Hg ratios exceeded 1 for the majority of organisms in both basins, with most ratios exceeding 10. Using stable nitrogen isotopes as indicator of trophic level, no significant correlations were found with [THg], [Se] or Se:Hg. The apparent lack of biomagnification trends was attributed to elevated [THg] in plankton in the inorganic form mostly, as well as the possibility of consistent Se supply reducing the biomagnification in the food web of the organic portion of THg.

  2. Characterization of Habitat and Biological Communities at Fixed Sites in the Great Salt Lake Basins, Utah, Idaho, and Wyoming, Water Years 1999-2001

    Science.gov (United States)

    Albano, Christine M.; Giddings, Elise M.P.

    2007-01-01

    . Invertebrate taxa richness, pollution tolerance, and trophic interactions at riffle and nonriffle sites responded differently to environmental variables. Fish communities were assessed in relation to the designated beneficial use for aquatic life for each site. Fish-community sites in basins where agriculture and urbanization were prevalent consistently had poorer conditions than sites with forest and rangeland uses. Warm temperatures appear to be limiting most native fish species, and more introduced, warm-water fish species were present at sites with warmer temperatures. Ranges of environmental conditions where native species were present or absent were identified. The farthest-upstream site in each of the three basins had better ecological condition overall, as indicated by the integrity of habitat and the presence of more sensitive algae, invertebrate, and fish species than were observed at sites downstream. The farthest-downstream site in each of the three basins showed the poorest ecological condition, with more tolerant organisms present, degraded habitat and water-quality conditions, and a high degree of effects from agriculture, grazing, and urbanization. Of the mid-basin sites, the site most affected by urbanization had more degraded biological condition than the agricultural indicator site of similar basin size.

  3. Hydrologic and water-quality rehabilitation of environments for suitable fish habitat

    Science.gov (United States)

    Zhao, C. S.; Yang, S. T.; Xiang, H.; Liu, C. M.; Zhang, H. T.; Yang, Z. L.; Zhang, Y.; Sun, Y.; Mitrovic, S. M.; Yu, Q.; Lim, R. P.

    2015-11-01

    Aquatic ecological rehabilitation is attracting increasing public and research attention, but without knowledge of the responses of aquatic species to their habitats the success of habitat restoration is uncertain. Thus efficient study of species response to habitat, through which to prioritize the habitat factors influencing aquatic ecosystems, is highly important. However many current models have too high requirement for assemblage information and have great bias in results due to consideration of only the species' attribute of presence/absence, abundance or biomass, thus hindering the wider utility of these models. This paper, using fish as a case, presents a framework for identification of high-priority habitat factors based on the responses of aquatic species to their habitats, using presence/absence, abundance and biomass data. This framework consists of four newly developed sub-models aiming to determine weightings for the evaluation of species' contributions to their communities, to quantitatively calculate an integrated habitat suitability index for multi-species based on habitat factors, to assess the suitable probability of habitat factors and to assess the rehabilitation priority of habitat factors. The framework closely links hydrologic, physical and chemical habitat factors to fish assemblage attributes drawn from monitoring datasets on hydrology, water quality and fish assemblages at a total of 144 sites, where 5084 fish were sampled and tested. Breakpoint identification techniques based on curvature in cumulated dominance along with a newly developed weighting calculation model based on theory of mass systems were used to help identify the dominant fish, based on which the presence and abundance of multiple fish were normalized to estimate the integrated habitat suitability index along gradients of various factors, based on their variation with principal habitat factors. Then, the appropriate probability of every principal habitat factor was

  4. Strong links between metal contamination, habitat modification and estuarine larval fish distributions

    Energy Technology Data Exchange (ETDEWEB)

    McKinley, Andrew C., E-mail: andrew.mckinley@hotmail.com [Evolution and Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052 (Australia); Miskiewicz, Anthony [Environment and Recreation, Wollongong City Council, 41 Burelli Street, Wollongong, New South Wales 2500 (Australia); Taylor, Matthew D.; Johnston, Emma L. [Evolution and Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052 (Australia)

    2011-06-15

    Changes to larval fish assemblages may have far reaching ecological impacts. Correlations between habitat modification, contamination and marine larval fish communities have rarely been assessed in situ. We investigated links between the large-scale distribution of stressors and larval fish assemblages in estuarine environments. Larval fish communities were sampled using a benthic sled within the inner and outer zones of three heavily modified and three relatively unmodified estuaries. Larval abundances were significantly greater in modified estuaries, and there were trends towards greater diversity in these systems. Differences in larval community composition were strongly related to sediment metal levels and reduced seagrass cover. The differences observed were driven by two abundant species, Paedogobius kimurai and Ambassis jacksoniensis, which occurred in large numbers almost exclusively in highly contaminated and pristine locations respectively. These findings suggest that contamination and habitat alteration manifest in substantial differences in the composition of estuarine larval fish assemblages. - Highlights: > We examine contamination/habitat modification impacts on larval fish. > Larvae communities differ between modified/unmodified estuaries. > Larvae are more abundant/diverse in modified areas. > Trends are strongly related to sediment metals/seagrass cover. > Larval impacts have wider ecological importance. - We describe strong links between sediment metals contamination, habitat modification and substantial differences in the composition of the estuarine larval fish assemblage.

  5. Fish community structure and distribution in a macro-tidal inshore habitat in the Irish Sea

    Science.gov (United States)

    Jovanovic, Boris; Longmore, Craig; O'Leary, Áine; Mariani, Stefano

    2007-10-01

    Estuaries, lagoons and mudflat habitats represent a crucial biodiversity component in coastal waters and may act as vital nurseries and shelters for the juvenile stages of many commercial fish species. A study of the spatial distribution of inshore fish fauna around the shallow coastal habitats of North Bull Island (Dublin Bay, Ireland) was carried out during summer and autumn of 2005, in order to characterise the fish community present therein. Four stations were examined, situated along a putative environmental gradient, between the mudflat and the open sea shore. Stations were surveyed at both high and low tide and sampling was repeated weekly for eight weeks, spanning over four spring and four neap tidal events. A total of 17 fish species were caught, belonging to 13 families. The community was largely dominated by the lesser sandeel ( Ammodytes tobianus) and the common goby ( Pomatoschistus microps). Ordination techniques were used to generate hypotheses as to the general patterns in the fish community; Shannon-Wiener index was employed to estimate spatial, temporal and tidal trends in diversity; and analysis of variance (ANOVA) was employed to test for the influence of time of the year, habitat, tidal phase and tidal state on the spatial distribution of fishes. Results reveal that time of the year and habitat variation across the environmental gradient are the major factors in determining fish community structure. The influence of tidal dynamics seem to have a lesser impact on the overall community, but can significantly and variably affect the distribution of individual species.

  6. Fish effects on ocean current observations in the Cariaco Basin

    Science.gov (United States)

    Virmani, Jyotika I.; Weisberg, Robert H.

    2009-03-01

    Multiple years of moored current meter observations from the Cariaco Basin show low-frequency variations along with near-inertial waves and further imply the persistent diurnal movement of fish species known to populate the basin. In agreement with short-term observations from 1979, the more recent observations with acoustic Doppler current profilers provide evidence of the multidecadal presence and behavior of these species. An unwanted corollary, however, is a bias in both the vertical and horizontal components of velocity due to the fish movements. Removal of this fish bias results in large data loss (approximately 72%); however, an interpolated, non-biased data set is developed with depth-averaged horizontal velocities comparable to the observations, demonstrating successful elimination of the bias. Further comparisons show that the interpolated data result in minimal variance density loss at low frequencies and a reduction of variance density at high frequencies such that the interpolated data in the internal wave range more closely fit the Garrett-Munk spectrum. The net result is a data set appropriate for further analysis. A mean downward velocity of 0.18 cm s-1 is a reflection of a biogenic particle flux and some residual fish contamination. The mean settling speed of particles in the Cariaco Basin is calculated, via Stokes law, to be smaller than 0.04 cm s-1. Velocity observations from acoustic current meters at depths greater than 400 m are impacted by the water clarity; therefore alternate methods should be used to make velocity measurements at depth.

  7. Effects of flooding and tamarisk removal on habitat for sensitive fish species in the San Rafael River, Utah: implications for fish habitat enhancement and future restoration efforts.

    Science.gov (United States)

    Keller, Daniel L; Laub, Brian G; Birdsey, Paul; Dean, David J

    2014-09-01

    Tamarisk removal is a widespread restoration practice on rivers in the southwestern USA, but impacts of removal on fish habitat have rarely been investigated. We examined whether tamarisk removal, in combination with a large spring flood, had the potential to improve fish habitat on the San Rafael River in southeastern Utah. We quantified habitat complexity and the distribution of wood accumulation in a tamarisk removal site (treated) and a non-removal site (untreated) in 2010, 1 year prior to a large magnitude and long-duration spring flood. We used aerial imagery to analyze river changes in the treated and untreated sites. Areas of channel movement were significantly larger in the treated site compared to the untreated site, primarily because of geomorphic characteristics of the channel, including higher sinuosity and the presence of an ephemeral tributary. However, results suggest that tamarisk removal on the outside of meander bends, where it grows directly on the channel margins, can promote increased channel movement. Prior to the flood, wood accumulations were concentrated in sections of channel where tamarisk had been removed. Pools, riffles, and backwaters occurred more frequently within 30 m upstream and downstream of wood accumulations compared to areas within 30 m of random points. Pools associated with wood accumulations were also significantly larger and deeper than those associated with random points. These results suggest that the combination of tamarisk removal and wood input can increase the potential for channel movement during spring floods thereby diversifying river habitat and improving conditions for native fish. PMID:24993795

  8. Benthos and demersal fish habitats in the German Exclusive Economic Zone (EEZ) of the North Sea

    Science.gov (United States)

    Neumann, Hermann; Reiss, Henning; Ehrich, Siegfried; Sell, Anne; Panten, Kay; Kloppmann, Matthias; Wilhelms, Ingo; Kröncke, Ingrid

    2013-09-01

    We compiled data from different monitoring surveys to analyse and compare community and diversity patterns of fish, epi- and infauna in the German Exclusive Economic Zone (EEZ) of the North Sea in order to identify benthic habitats common to all faunal components. We found congruent community patterns of fish, epi- and infauna for the coastal waters, the Oysterground and the area called "Duck's Bill", which coincided with specific abiotic characteristics of these regions. The three regions were defined as special habitats for fish, epi- and infauna species in the German EEZ. The differences in the seasonal variability of abiotic factors seem to be the most important discriminating abiotic characteristic for the three habitats. The spatial distribution of fish, epifauna and infauna communities remained stable over time although habitat characteristics such as sea surface temperature increased due to climate change. However, it is expected that the coastal habitat will be more sensitive to future climate change effects in contrast to the Oysterground and Duck's Bill habitat.

  9. Disentangling the effects of habitat suitability, dispersal, and fragmentation on the distribution of river fishes.

    Science.gov (United States)

    Radinger, Johannes; Wolter, Christian

    2015-06-01

    Habitat suitability, dispersal potential, and fragmentation influence the distribution of stream fishes; however, their relative influence and interacting effects on species distributions are poorly understood, which may result in uncertain outcomes of river rehabilitation and conservation. Using empirical data describing 17 relatively common stream fishes, we combine (1) species habitat suitability models (MaxEnt) with a (2) species dispersal model (FIDIMO) and a (3) worst-case scenario of the influence of river fragmentation on dispersal. Using generalized linear mixed models, we aimed to uncover the role of these factors in explaining the probability of presence. Simulations over nine years allowed for assessing the relative importance of dispersal over time for structuring species occurrences vs. the importance of habitat suitability. Models combining all three structuring factors performed consistently better in predicting the spatial occurrence patterns than models including only single factors. Our results confirmed that distribution patterns of stream fishes are jointly controlled by species dispersal and habitat suitability. An increase of 0.1 habitat suitability probability more than doubled the odds of species occurrence; an increase of 0.1 dispersal probability yielded a 14-fold increase of the odds of species occurrence. Temporal simulations revealed that over short time frames (1-2 years) dispersal from nearby source populations is four times more important than habitat suitability for species presence. However, over longer time periods, the importance of habitat suitability increases relative to the importance of dispersal. Surprisingly, fragmentation by migration barriers did not appear as a significant driver of occurrence patterns. Concluding, these findings demonstrate the importance of the spatial arrangement of suitable habitats and potential source populations, as well as their relative position in relation to barriers. We emphasize

  10. Phylogenetic signal and major ecological shifts in the ecomorphological structure of stream fish in two river basins in Brazil

    Directory of Open Access Journals (Sweden)

    Camilo Andrés Roa-Fuentes

    2015-03-01

    Full Text Available We tested the contribution of the phylogenetic and specific components to the ecomorphological structure of stream fish from the upper Paraguai River and upper São Francisco River basins, and identified nodes in the phylogenetic tree at which major ecological shifts occurred. Fish were sampled between June and October of 2008 in 12 streams (six in each basin. In total, 22 species from the upper Paraguai River basin and 12 from the upper São Francisco River were analyzed. The ecomorphological patterns exhibited phylogenetic signal, indicating that the ecomorphological similarity among species is associated with the degree of relatedness. A strong habitat template is most likely to be the primary cause for a high phylogenetic signal. A significant contribution from the specific component was also detected, supporting the idea that the phylogenetic signal occurs in some clades for some traits, but not in others. The major ecological shifts were observed in the basal nodes, suggesting that ecological niche differences appear to accumulate early in the evolutionary history of major clades. This finding reinforces the role of key traits in the diversification of Neotropical fishes. Ecological shifts in recent groups could be related to morphological modifications associated with habitat use.

  11. Role of circulation scales and water mass distributions on larval fish habitats in the Eastern Tropical Pacific off Mexico

    Science.gov (United States)

    León-Chávez, Cristina A.; Beier, Emilio; Sánchez-Velasco, Laura; Barton, Eric Desmond; Godínez, Victor M.

    2015-06-01

    On the basis of five oceanographic cruises carried out in the Eastern Tropical Pacific off Mexico, relationships between the larval fish habitats (areas inhabited by larval fish assemblages) and the environmental circulation scales (mesoscale, seasonal, and interannual) were examined. Analysis of in situ data over a grid of hydrographic stations and oblique zooplankton hauls with bongo net (505 µm) was combined with orthogonal robust functions decomposition applied to altimetry anomalies obtained from satellite. During both cool (March and June) and warm (August and November) periods, Bray-Curtis dissimilarity Index defined three recurrent larval fish habitats which varied in species composition and extent as a function of the environmental scales. The variability of the Tropical larval fish habitat (characterized by high species richness, and dominated by Vinciguerria lucetia, Diogenichthys laternatus, and Diaphus pacificus) was associated with the seasonal changes. The Transitional-California Current larval fish habitat (dominated by V. lucetia and D. laternatus, with lower mean abundance and lower species richness than in the Tropical habitat) and Coastal-and-Upwelling larval fish habitat (dominated by Bregmaceros bathymaster) was associated mainly with mesoscale activity induced by eddies and with coastal upwelling. During February 2010, the Tropical larval fish habitat predominated offshore and the Transitional-California Current larval fish habitat was not present, which we attribute to the effect of El Niño conditions. Thus, the mesoscale, seasonal, and interannual environmental scales affect the composition and extension of larval fish habitats.

  12. Habitat features affect bluehead sucker, flannelmouth sucker, and roundtail chub across a headwater tributary system in the Colorado River Basin

    Science.gov (United States)

    Bower, M.R.; Hubert, W.A.; Rahel, F.J.

    2008-01-01

    We assessed the distributions of three species of conservation concern, bluehead sucker (Catostomus discobolus), flannelmouth sucker (Catostomus latipinnis), and roundtail chub (Gila robusta), relative to habitat features across a headwater tributary system of the Colorado River basin in Wyoming. We studied the upper Muddy Creek watershed, Carbon County, portions of which experience intermittent flows during late summer and early fall. Fish and habitat were sampled from 57 randomly-selected, 200-m reaches and 416 habitat units (i.e., pools, glides, or runs) during the summer and fall of 2003 and 2004. Among reaches, the occurrences of adults and juveniles of all three species were positively related to mean wetted width and the surface area of pool habitat, and the occurrences of adult bluehead sucker and roundtail chub were also positively related to the abundance of rock substrate. Only juvenile bluehead sucker appeared to be negatively influenced by the proportion of a reach that was dry at the time of sampling. Within individual pools, glides, and runs, the occurrences of adults and juveniles of all three species were positively related to surface area and maximum depth, and occurrences of bluehead sucker and flannelmouth sucker juveniles were more probable in pools than in glides or runs.

  13. Climate change expands the spatial extent and duration of preferred thermal habitat for lake Superior fishes.

    Directory of Open Access Journals (Sweden)

    Timothy J Cline

    Full Text Available Climate change is expected to alter species distributions and habitat suitability across the globe. Understanding these shifting distributions is critical for adaptive resource management. The role of temperature in fish habitat and energetics is well established and can be used to evaluate climate change effects on habitat distributions and food web interactions. Lake Superior water temperatures are rising rapidly in response to climate change and this is likely influencing species distributions and interactions. We use a three-dimensional hydrodynamic model that captures temperature changes in Lake Superior over the last 3 decades to investigate shifts in habitat size and duration of preferred temperatures for four different fishes. We evaluated habitat changes in two native lake trout (Salvelinus namaycush ecotypes, siscowet and lean lake trout, Chinook salmon (Oncorhynchus tshawytscha, and walleye (Sander vitreus. Between 1979 and 2006, days with available preferred thermal habitat increased at a mean rate of 6, 7, and 5 days per decade for lean lake trout, Chinook salmon, and walleye, respectively. Siscowet lake trout lost 3 days per decade. Consequently, preferred habitat spatial extents increased at a rate of 579, 495 and 419 km(2 per year for the lean lake trout, Chinook salmon, and walleye while siscowet lost 161 km(2 per year during the modeled period. Habitat increases could lead to increased growth and production for three of the four fishes. Consequently, greater habitat overlap may intensify interguild competition and food web interactions. Loss of cold-water habitat for siscowet, having the coldest thermal preference, could forecast potential changes from continued warming. Additionally, continued warming may render more suitable conditions for some invasive species.

  14. A scientific basis for restoring fish spawning habitat in the St. Clair and Detroit Rivers of the Laurentian Great Lakes

    Science.gov (United States)

    Manny, Bruce A.; Roseman, Edward F.; Kennedy, Gregory W.; Boase, James C.; Craig, Jaquelyn; Bennion, David H.; Read, Jennifer; Vaccaro, Lynn; Chiotti, Justin A.; Drouin, Richard; Ellison, Roseanne

    2015-01-01

    Loss of functional habitat in riverine systems is a global fisheries issue. Few studies, however, describe the decision-making approach taken to abate loss of fish spawning habitat. Numerous habitat restoration efforts are underway and documentation of successful restoration techniques for spawning habitat of desirable fish species in large rivers connecting the Laurentian Great Lakes are reported here. In 2003, to compensate for the loss of fish spawning habitat in the St. Clair and Detroit Rivers that connect the Great Lakes Huron and Erie, an international partnership of state, federal, and academic scientists began restoring fish spawning habitat in both of these rivers. Using an adaptive management approach, we created 1,100 m2 of productive fish spawning habitat near Belle Isle in the Detroit River in 2004; 3,300 m2 of fish spawning habitat near Fighting Island in the Detroit River in 2008; and 4,000 m2 of fish spawning habitat in the Middle Channel of the St. Clair River in 2012. Here, we describe the adaptive-feedback management approach that we used to guide our decision making during all phases of spawning habitat restoration, including problem identification, team building, hypothesis development, strategy development, prioritization of physical and biological imperatives, project implementation, habitat construction, monitoring of fish use of the constructed spawning habitats, and communication of research results. Numerous scientific and economic lessons learned from 10 years of planning, building, and assessing fish use of these three fish spawning habitat restoration projects are summarized in this article.

  15. Fish and Wildlife report for the Closed Basin Division : San Luis Valley Project Colorado

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report for the Closed Basin Division is a description of the project and the fish and wildlife resources associated with the project. The document also reports...

  16. Columbia River basin fish and wildlife program strategy for salmon

    International Nuclear Information System (INIS)

    Three species of Snake River salmon have been listed as threatened or endangered under the federal Endangered Species Act. In response, the Northwest Power Planning Council worked with the states of Idaho, Montana, Oregon and Washington, Indian tribes, federal agencies and interest groups to address the status of Snake River salmon runs in a forum known as the Salmon Summit. The Summit met in 1990 and 1991 and reached agreement on specific, short-term actions. When the Summit disbanded in April 1991, responsibility for developing a regional recovery plan for salmon shifted to the Council. The Council responded with a four-phased process of amending its Columbia River Basin Fish and Wildlife Program. The first three phases. completed in September 1992, pertain to salmon and steelhead. Phase four, scheduled for completion in October 1993, will take up issues of resident fish and wildlife. This paper deals with the first three phases, collectively known as Strategy for Salmon

  17. Umatilla River Subbasin Fish Habitat Improvement Program, 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    St. Hilaire, Danny R. (Oregon Department of Fish and Wildlife, Pendleton, OR)

    2006-02-01

    This annual report is in fulfillment of contractual obligations with Bonneville Power Administration (BPA), which is the funding source for the Oregon Department of Fish and Wildlife's (ODFW), Umatilla River Subbasin Fish Habitat Improvement Program (Program). The Program works cooperatively with private landowners to develop long-term restoration, under which, passive and active Habitat Improvement Projects are conducted. Historically, projects have included livestock exclusion fencing (passive restoration) to protect riparian habitats, along with the installation of instream structures (active restoration) to address erosion and improve fish habitat. In recent years, the focus of active restoration has shifted to bioengineering treatments and, more recently, to channel re-design and reconstruction aimed at improving fish habitat, by restoring stable channel function. This report provides a summary of Program activities for the 2004 calendar year (January 1 through December 31, 2004), within each of the four main project phases, including: (1) Implementation--Pre-Work, (2) Implementation--On Site Development, (3) Operation and Maintenance, and (4) Monitoring and Evaluation. This report also summarizes Program Administrative, Interagency Coordination, and Public Education activities.

  18. ENERGETIC EXTREMES IN A HOSTILE HABITAT: FISH LOCOMOTION ON WAVE-SWEPT CORAL REEFS

    DEFF Research Database (Denmark)

    Steffensen, John Fleng

    2010-01-01

    bandanensis), which maintain tuna-like optimum swimming speeds (7.5 lengths per second) while using no more energy than a similar-sized fish swimming four times slower. Such high performance in S. bandanensis arises from their exceptional aerobic scope (22 times above RMR), streamlined rigid-body posture......Fulton, C.J., Johansen, J. L. and Steffensen, J.F. Abstract: Shallow wave-swept habitats are a major challenge for fish locomotion, where crashing waves produce water flows equivalent to cyclone-force winds. Here we document the exceptional locomotor energetics of Bluelined wrasse (Stethojulis......, and wing-like fins that generate lift-based thrust at high speed. Literally flying underwater, Stethojulis and other winged-fin species are the most abundant fish in wave-swept coral reef habitats. We discuss the extreme swimming performance of these reef fishes within the context of other non...

  19. Reef fish dynamic response to climatic variability in a warm eastern Mediterranean semi-enclosed basin

    Science.gov (United States)

    Agiadi, K.; Koskeridou, E.; Giamali, Ch.; Karakitsios, V.

    2012-04-01

    Recent studies on the effects of global warming on fish populations reveal that the resulting hypoxia-based habitat compression due to the expansion of the oxygen minimum zone may lead to the restriction of fish depth distributions to the oxygenated near-surface layer1. Here we postulate that similar phenomena may have affected the fish distribution in the early Pliocene Heraklion semi-enclosed sea (Crete, eastern Mediterranean). Fish otoliths from Voutes section are systematically identified and the data is examined from a palaeoecologic perspective in response to the Pliocene climatic variability. Bregmaceros and Diaphus taaningi otoliths' relative abundances are used as reliable palaeoclimatic indicators2. The Voutes section sediments contain a very rich fish fauna. Diaphus spp., Bregmaceros sp., Sardinella maderensis, Phosichthyidae and Sternoptychyidae form the pelagic component. Mesopelagic taxa belong mostly to Myctophids. The benthopelagic and benthic component of the fish fauna is very well diversified and is comprised of Gobiids, such as Gobius cf. niger, Callogobius sp., Lesueurigobius aff. sanzoi, and Aphya sp., as well as Gadiculus labiatus, Laemonema sp., Oblada melanura, Parascombrus mutinensis, Barbourisia rufa, Blennius sp., Ammodytes sp., Solea aff. solea. The presence of Oligopus sp., Spratelloides sp., and Brotula cf. mutlibarbata in the middle part of the section indicate the development of a reef in the study area. The palaeoecologic analysis of the surface, intermediate and deep water faunal groups indicate that the pelagic fish populations in the semi-enclosed early Pliocene Heraklion basin directly reflect the climatic variability. However, the intermediate and deep water fish did not respond to climate change in the same manner. Indeed, two dysoxic events are recorded in this section, where the pelagic component of the fauna is almost exclusively comprised of Bregmaceros sp., few Myctophids are present, and the benthic and benthopelagic

  20. The Importance of Providing Multiple-Channel Sections in Dredging Activities to Improve Fish Habitat Environments

    Directory of Open Access Journals (Sweden)

    Hung-Pin Chiu

    2016-01-01

    Full Text Available After Typhoon Morakot, dredging engineering was conducted while taking the safety of humans and structures into consideration, but partial stream reaches were formed in the multiple-channel sections in Cishan Stream because of anthropogenic and natural influences. This study mainly explores the distribution of each fish species in both the multiple- and single-channel sections in the Cishan Stream. Parts of the environments did not exhibit significant differences according to a one-way ANOVA comparing the multiple- and single-channel sections, but certain areas of the multiple-channel sections had more diverse habitats. Each fish species was widely distributed by non-metric multidimensional scaling in the multiple-channel sections as compared to those in the single-channel sections. In addition, according to the principal component analysis, each fish species has a preferred environment, and all of them have a wide choice of habitat environments in the multiple-channel sections. Finally, the existence of multiple-channel sections could significantly affect the existence of the fish species under consideration in this study. However, no environmental factors were found to have an influence on fish species in the single-channel sections, with the exception of Rhinogobius nantaiensis. The results show that providing multiple-channel sections in dredging activities could improve fish habitat environments.

  1. Bioaccumulation of human pharmaceuticals in fish across habitats of a tidally influenced urban bayou.

    Science.gov (United States)

    Du, Bowen; Haddad, Samuel P; Luek, Andreas; Scott, W Casan; Saari, Gavin N; Burket, S Rebekah; Breed, Christopher S; Kelly, Martin; Broach, Linda; Rasmussen, Joseph B; Chambliss, C Kevin; Brooks, Bryan W

    2016-04-01

    Though pharmaceuticals and other contaminants of emerging concern are increasingly observed in inland water bodies, the occurrence and bioaccumulation of pharmaceuticals in estuaries and coastal ecosystems are poorly understood. In the present study, bioaccumulation of select pharmaceuticals and other contaminants of emerging concern was examined in fish from Buffalo Bayou, a tidally influenced urban ecosystem that receives effluent from a major (∼200 million gallons per day) municipal wastewater treatment plant in Houston, Texas, USA. Using isotope dilution liquid chromatography-tandem mass spectrometry, various target analytes were observed in effluent, surface water, and multiple fish species. The trophic position of each species was determined using stable isotope analysis. Fish tissue levels of diphenhydramine, which represented the only pharmaceutical detected in all fish species, did not significantly differ between freshwater and marine fish predominantly inhabiting benthic habitats; however, saltwater fish with pelagic habitat preferences significantly accumulated diphenhydramine to the highest levels observed in the present study. Consistent with previous observations from an effluent-dependent freshwater river, diphenhydramine did not display trophic magnification, which suggests site-specific, pH-influenced inhalational uptake to a greater extent than dietary exposure in this tidally influenced urban ecosystem. The findings highlight the importance of understanding differential bioaccumulation and risks of ionizable contaminants of emerging concern in habitats of urbanizing coastal systems. PMID:26587912

  2. Wigwam River juvenile bull trout and fish habitat monitoring program : 2001 data report

    International Nuclear Information System (INIS)

    The Wigwam River juvenile bull trout and fish habitat monitoring program is a co-operative initiative of the British Columbia Ministry of Water, Land, and Air Protection and Bonneville Power Administration. The Wigwam River has been characterized as the single most important bull trout spawning stream in the Kootenay Region. This report provides a summary of results obtained during the second year (2001) of the juvenile bull trout enumeration and fish habitat assessment program. This project was commissioned in planning for fish habitat protection and forest development within the upper Wigwam River valley. The broad intent is to develop a better understanding of juvenile bull trout and Westslope cutthroat trout recruitment and the ongoing hydrologic and morphologic processes in the upper Wigwam River, especially as they relate to spawning and rearing habitat quality. Five permanent sampling sites were established August 2000 in the Wigwam river drainage (one site on Bighorn Creek and four sites on the mainstem Wigwam River). At each site, juvenile (0(sup+), 1(sup+) and 2(sup+) age classes) fish densities and stream habitat conditions were measured over two stream meander wavelengths. Bull trout represented 95.1% of the catch and the mean density of juvenile bull trout was estimated to be 20.7 fish/100m(sup 2) (range 0.9 to 24.0 fish/100m(sup 2)). This compares to 17.2 fish/100m(sup 2) (+20%) for the previous year. Fry (0(sup+)) dominated the catch and this was a direct result of juvenile bull trout ecology and habitat partitioning among life history stages. Site selection was biased towards sample sites which favored high bull trout fry capture success. Comparison of fry density estimates replicated across both the preliminary survey (1997) and the current study (Cope and Morris 2001) illustrate the stable nature of these high densities. Bull trout populations have been shown to be extremely susceptible to habitat degradation and over-harvest and are ecologically

  3. Are artificial reefs surrogates of natural habitats for corals and fish in Dubai, United Arab Emirates?

    Science.gov (United States)

    Burt, J.; Bartholomew, A.; Usseglio, P.; Bauman, A.; Sale, P. F.

    2009-09-01

    Artificial reefs are often promoted as mitigating human impacts in coastal ecosystems and enhancing fisheries; however, evidence supporting their benefits is equivocal. Such structures must be compared with natural reefs in order to assess their performance, but past comparisons typically examined artificial structures that were too small, or were immature, relative to the natural reefs. We compared coral and fish communities on two large (>400,000 m3) and mature (>25 year) artificial reefs with six natural coral patches. Coral cover was higher on artificial reefs (50%) than in natural habitats (31%), but natural coral patches contained higher species richness (29 vs. 20) and coral diversity ( H' = 2.3 vs. 1.8). Multivariate analyses indicated strong differences between coral communities in natural and artificial habitats. Fish communities were sampled seasonally for 1 year. Multivariate fish communities differed significantly among habitat types in the summer and fall, but converged in the winter and spring. Univariate analysis indicated that species richness and abundance were stable throughout the year on natural coral patches but increased significantly in the summer on artificial reefs compared with the winter and spring, explaining the multivariate changes in community structure. The increased summer abundance on artificial reefs was mainly due to adult immigration. Piscivores were much more abundant in the fall than in the winter or spring on artificial reefs, but had low and stable abundance throughout the year in natural habitats. It is likely that the decreased winter and spring abundance of fish on the artificial reefs resulted from both predation and emigration. These results indicate that large artificial reefs can support diverse and abundant coral and fish communities. However, these communities differ structurally and functionally from those in natural habitats, and they should not be considered as replacements for natural coral and fish communities.

  4. White River Falls Fish Passage Project, Tygh Valley, Oregon : Final Technical Report, Volume II, Appendix A, Fisheries Habitat Inventory.

    Energy Technology Data Exchange (ETDEWEB)

    Oregon. Dept. of Fish and Wildlife; Mount Hood National Forest (Or.)

    1985-06-01

    Stream habitat inventories on 155 stream miles in the White River drainage on the Mt. Hood National Forest are summarized in this report. Inventory, data evaluation, and reporting work were accomplished within the framework of the budgetary agreements established between the USDA Forest Service, Mt. Hood National Forest, and the Bonneville Power Administration, in the first 2 years of a multiyear program. One hundred forty-two stream miles of those inventoried on the Forest appear suitable for anadromous production. The surveyed area appears to contain most or all of the high quality fish habitat which would be potentially available for anadromous production if access is provided above the White River Falls below the Forest boundary. About 34 stream miles would be immediately accessible without further work on the Forest with passage at the Falls. Seventy-two additional miles could be made available with only minor (requiring low investment of money and planning) passage work further up the basin. Thirty-six miles of potential upstream habitat would likely require major investment to provide access.

  5. Models of Marine Fish Biodiversity: Assessing Predictors from Three Habitat Classification Schemes.

    Science.gov (United States)

    Yates, Katherine L; Mellin, Camille; Caley, M Julian; Radford, Ben T; Meeuwig, Jessica J

    2016-01-01

    Prioritising biodiversity conservation requires knowledge of where biodiversity occurs. Such knowledge, however, is often lacking. New technologies for collecting biological and physical data coupled with advances in modelling techniques could help address these gaps and facilitate improved management outcomes. Here we examined the utility of environmental data, obtained using different methods, for developing models of both uni- and multivariate biodiversity metrics. We tested which biodiversity metrics could be predicted best and evaluated the performance of predictor variables generated from three types of habitat data: acoustic multibeam sonar imagery, predicted habitat classification, and direct observer habitat classification. We used boosted regression trees (BRT) to model metrics of fish species richness, abundance and biomass, and multivariate regression trees (MRT) to model biomass and abundance of fish functional groups. We compared model performance using different sets of predictors and estimated the relative influence of individual predictors. Models of total species richness and total abundance performed best; those developed for endemic species performed worst. Abundance models performed substantially better than corresponding biomass models. In general, BRT and MRTs developed using predicted habitat classifications performed less well than those using multibeam data. The most influential individual predictor was the abiotic categorical variable from direct observer habitat classification and models that incorporated predictors from direct observer habitat classification consistently outperformed those that did not. Our results show that while remotely sensed data can offer considerable utility for predictive modelling, the addition of direct observer habitat classification data can substantially improve model performance. Thus it appears that there are aspects of marine habitats that are important for modelling metrics of fish biodiversity that are

  6. Developing a top-down land-use management procedure for fish habitat enhancement

    Science.gov (United States)

    Chiang, Li-Chi; Lin, Yu-Pin; Wu, Chen-Huan

    2013-04-01

    Land-use change can influence stream ecosystem and alter instream physical, chemical and biological habitat. For example, urbanization usually contributes to increasing sediment loadings to streams and inappropriate agricultural management results in degradation of stream water quality. Watershed model is an effective way to forecast the watershed response to different land-use change scenarios. We developed a top-down approach from the watershed scale to the microscale by combining the habitat model, land-use change model and watershed hydrological model. This approach can assist land-use planner to make optimal decisions with fish habitat enhancement. The study was conducted in Datuan Stream, located in Tamsui District, New Taipei City and the target species is monk goby (Sicyopterus japonicus). The spatially explicit land-use change model, CLUE-s was first applied to project several future land-use scenarios and the Soil and Water Assessment Tool (SWAT) was then applied to simulate streamflow for different land-use scenarios. The simulated streamflow were used as input data for simulating river habitat, where Habitat Suitability Analysis is one of the most important processes. The relationship between target species and multiple environmental factors of habitat was first developed using the Habitat suitability index (HSI). In this study, we used fish presence probabilities for each velocity and water depth to establish different HSI functions under 4 flow conditions (slack, riffle, pool and run) using genetic programming (GP). The physical habitat model, River 2D, was then applied to simulate the river section and calculate weighted usable area (WUA). Based on the WUA results for different land-use scenarios, we further evaluated the relationships between WUA and land-use/landscape patterns using a spatial pattern analysis program, Fragstats. The results showed that by using the habitat model for classified flows, the habitat suitability curve which reflects

  7. Early Archaean collapse basins, a habitat for early bacterial life.

    Science.gov (United States)

    Nijman, W.

    For a better definition of the sedimentary environment in which early life may have flourished during the early Archaean, understanding of the basin geometry in terms of shape, depth, and fill is a prerequisite. The basin fill is the easiest to approach, namely from the well exposed, low-grade metamorphic 3.4 - 3.5 Ga rock successions in the greenstone belts of the east Pilbara (Coppin Gap Greenstone Belt and North Pole Dome) in West Australia and of the Barberton Greenstone Belt (Buck Ridge volcano-sedimentary complex) in South Africa. They consist of mafic to ultramafic volcanic rocks, largely pillow basalts, with distinct intercalations of intermediate to felsic intrusive and volcanic rocks and of silicious sediments. The, partly volcaniclastic, silicious sediments of the Buck Ridge and North Pole volcano-sedimentary complexes form a regressive-transgressive sequence. They were deposited close to base level, and experienced occasional emersion. Both North Pole Chert and the chert of the Kittys Gap volcano-sedimentary complex in the Coppin Gap Greenstone Belt preserve the flat-and-channel architecture of a shallow tidal environment. Thickness and facies distribution appear to be genetically linked to systems, i.e. arrays, of syn-depositionally active, extensional faults. Structures at the rear, front and bottoms of these fault arrays, and the fault vergence from the basin margin towards the centre characterize the basins as due to surficial crustal collapse. Observations in the Pilbara craton point to a non-linear plan view and persistence for the basin-defining fault patterns over up to 50 Ma, during which several of these fault arrays became superposed. The faults linked high-crustal level felsic intrusions within the overall mafic rock suite via porphyry pipes, black chert veins and inferred hydrothermal circulations with the overlying felsic lavas, and more importantly, with the cherty sediments. Where such veins surfaced, high-energy breccias, and in the

  8. Global streamflow and thermal habitats of freshwater fishes under climate change

    NARCIS (Netherlands)

    Vliet, van M.T.H.; Ludwig, F.; Kabat, P.

    2013-01-01

    Climate change will affect future flow and thermal regimes of rivers. This will directly affect freshwater habitats and ecosystem health. In particular fish species, which are strongly adapted to a certain level of flow variability will be sensitive to future changes in flow regime. In addition, all

  9. Umatilla River Subbasin Fish Habitat Improvement Program, 1996-2003 Summary Report.

    Energy Technology Data Exchange (ETDEWEB)

    St. Hilaire, Danny R.; Montgomery, Michael; Bailey, Timothy D. (Oregon Department of Fish and Wildlife, John Day, OR)

    2005-01-01

    This annual report is in fulfillment of contractual obligations with Bonneville Power Administration (BPA), which is the funding source for the Oregon Department of Fish and Wildlife's (ODFW), Umatilla River Subbasin Fish Habitat Improvement Program (Program). The last Annual Program Report was submitted in 1997, and described projects undertaken in 1995. This report describes Program activities carried out in 2003, along with a summary of projects undertaken during the years 1996 through 2002. The Program works cooperatively with private landowners to develop long-term restoration agreements, under which, passive and active Habitat Improvement Projects are conducted. Historically, projects have included livestock exclusion fencing (passive restoration) to protect riparian habitats, along with the installation of instream structures (active restoration) to address erosion and improve fish habitat. In recent years, the focus of active restoration has shifted to bioengineering treatments and, more recently, to channel re-design and re-construction aimed at improving fish habitat, by restoring stable channel function. This report provides a summary table of past projects (1996-2002), along with a text description of more extensive habitat improvement projects, including: (1) Implementation of a four-phased project on the Lobato property (Birch Creek) beginning in 1996 and involving a demonstration bioengineering site and riparian improvements (fencing, planting), (2) Implementation of stable channel design/instream structure placement on the Houser property, East Birch Creek, beginning in 1998, an (3) Implementation of a joint, US Army Corps of Engineers/ODFW (cost share) project beginning in 2001 on the Brogoitti property, East Birch Creek, which involved implementation of stable channel design/construction and riparian improvement treatments.

  10. Rainwater Wildlife Area Habitat Evaluation Procedures Report; A Columbia Basin Wildlife Mitigation Project.

    Energy Technology Data Exchange (ETDEWEB)

    Childs, Allen B.

    2004-01-01

    The 8,768 acre Rainwater Wildlife Area was acquired in September 1998 by the Confederated Tribes of the Umatilla Indian Reservation (CTUIR) through an agreement with Bonneville Power Administration (BPA) to partially offset habitat losses associated with construction of the John Day and McNary hydroelectric facilities on the mainstem Columbia River. U.S. Fish and Wildlife Service (USFWS) Habitat Evaluation Procedures (HEP) were used to determine the number of habitat units credited to BPA for acquired lands. Upland and riparian forest, upland and riparian shrub, and grassland cover types are evaluated in this study. Targeted wildlife species include downy woodpecker (Picoides pubescens), black-capped chickadee (Parus atricopillus), blue grouse (Dendragapus obscurus), great blue heron (Ardea herodias), yellow warbler (Dendroica petechia), mink (Mustela vison), and Western meadowlark (Sturnella neglecta). Habitat surveys were conducted in 1998 and 1999 in accordance with published HEP protocols and included 65,300, 594m{sup 2}2 plots, and 112 one-tenth-acre plots. Between 153.3 and 7,187.46 acres were evaluated for each target wildlife mitigation species. Derived habitat suitability indices were multiplied by corresponding cover-type acreages to determine the number of habitat units for each species. The total baseline habitat units credited to BPA for the Rainwater Wildlife Area and its seven target species is 5,185.3 habitat units. Factors limiting habitat suitability are related to the direct, indirect, and cumulative effects of past livestock grazing, road construction, and timber harvest which have simplified the structure, composition, and diversity of native plant communities. Alternatives for protecting and improving habitat suitability include exclusion of livestock grazing, road de-commissioning/obliteration, reforestation and thinning, control of competing and unwanted vegetation (including noxious weeds), reestablishing displaced or reduced native

  11. Exploring relationships among land ownership, agricultural land use, and native fish species richness in the Upper Mississippi River Basin

    Science.gov (United States)

    DeJager, Nathan R.; Rohweder, Jason J.

    2012-01-01

    The general effects of agriculture on in-stream fish communities in the Upper Midwestern United States have been well studied for nearly three decades (Karr et al. 1985; Nerbonne and Vondracek 1991; Zimmerman et al. 2001; Goldstein and Meador 2005). Specific impacts include: lowered water levels, sediment loading and nutrient enrichment, loss of riparian habitat, changes to channel morphometry and physical habitat, and changes to the forage base. As part of the National Fish Habitat Action Plan (NFHAP), an initiative to protect, restore, and enhance the nation's fish and aquatic communities, the Fishers and Farmers Partnership specifically focuses on working with agricultural producers to help protect and restore aquatic resources in the Upper Mississippi River Basin (UMRB) (Fig. 1). Successful protection and/or restoration will require the partnership and local conservation agencies to effectively communicate and work with local landowners. However, roughly 43% of the agricultural lands in the UMRB are not operated by those who own the land (National Agricultural Statistics Service 2009) and this is expected to increase as heirs of farm estates now reside greater distances from their home farms than ever before (Arbuckle 2010).

  12. Assessment of Salmonids and Their Habitat Conditions in the Walla Walla River Basin within Washington, Annual Report 2002-2003.

    Energy Technology Data Exchange (ETDEWEB)

    Mendel, Glen; Trump, Jeremy; Gembala, Mike

    2003-09-01

    This study began in 1998 to assess salmonid distribution, relative abundance, genetics, and the condition of salmonid habitats in the Walla Walla River basin. Stream flows in the Walla Walla Basin continue to show a general trend that begins with a sharp decline in discharge in late June, followed by low summer flows and then an increase in discharge in fall and winter. Manual stream flow measurements at Pepper bridge showed an increase in 2002 of 110-185% from July-September, over flows from 2001. This increase is apparently associated with a 2000 settlement agreement between the U.S. Fish and Wildlife Service (USFWS) and the irrigation districts to leave minimum flows in the river. Stream temperatures in the Walla Walla basin were similar to those in 2001. Upper montane tributaries maintained maximum summer temperatures below 65 F, while sites in mid and lower Touchet and Walla Walla rivers frequently had daily maximum temperatures well above 68 F (high enough to inhibit migration in adult and juvenile salmonids, and to sharply reduce survival of their embryos and fry). These high temperatures are possibly the most critical physiological barrier to salmonids in the Walla Walla basin, but other factors (available water, turbidity or sediment deposition, cover, lack of pools, etc.) also play a part in salmonid survival, migration, and breeding success. The increased flows in the Walla Walla, due to the 2000 settlement agreement, have not shown consistent improvements to stream temperatures. Rainbow/steelhead (Oncorhynchus mykiss) trout represent the most common salmonid in the basin. Densities of Rainbow/steelhead in the Walla Walla River from the Washington/Oregon stateline to Mojonnier Rd. dropped slightly from 2001, but are still considerably higher than before the 2000 settlement agreement. Other salmonids including; bull trout (Salvelinus confluentus), chinook salmon (Oncorhynchus tshawytscha), mountain whitefish (Prosopium williamsoni), and brown trout (Salmo

  13. Ecological interdependences between fish fauna and habitat structures of the Elbe river; Oekologische Zusammenhaenge zwischen Fischgemeinschafts- und Lebensraumstrukturen der Elbe

    Energy Technology Data Exchange (ETDEWEB)

    Thiel, R. [Institut fuer Hydrobiologie und Fischereiwissenschaft - Elbelabor, Universitaet Hamburg, Hamburg (Germany); Buslovich, R.; Gerkens, M. [and others

    2000-07-01

    Fluvial fishes are good indicators of the habitat quality in river systems. However, no quantitative data about the relationships between the ecomorphology of the Elbe River and its fish community were available. Therefore, fish ecological assessments or predictions of the development of the fish populations were not possible. Since March 1997, a project financed by the Federal Ministry of Education, Science, Research and Technology focuses on mathematical modelling of the habitat used of all life history stages of the fish fauna. The results of the project shall support decisions in the framework of changing ecomorphology in the Elbe River. (orig.)

  14. Relative Importance of Coral Cover, Habitat Complexity and Diversity in Determining the Structure of Reef Fish Communities

    OpenAIRE

    Valeriya Komyakova; Munday, Philip L.; Jones, Geoffrey P.

    2013-01-01

    The structure of coral reef habitat has a pronounced influence on the diversity, composition and abundance of reef-associated fishes. However, the particular features of the habitat that are most critical are not always known. Coral habitats can vary in many characteristics, notably live coral cover, topographic complexity and coral diversity, but the relative effects of these habitat characteristics are often not distinguished. Here, we investigate the strength of the relationships between t...

  15. Nursery use of shallow habitats by epibenthic fishes in Maine nearshore waters

    Science.gov (United States)

    Lazzari, M. A.; Sherman, S.; Kanwit, J. K.

    2003-01-01

    Species richness and abundance of epibenthic fishes were quantified with daytime beam trawl tows in shallow water habitats during April-November 2000 of three mid-coast Maine estuaries: Casco Bay, Muscongus Bay and the Weskeag River. Five shallow (fishes were collected. Species richness per tow was greater in Casco Bay followed by the Weskeag River and Muscongus Bay. Catch per unit effort (CPUE) of fishes was greater in Casco Bay than in the Weskeag River or Muscongus Bay. Species richness and faunal abundances were positively associated with vegetation, particularly Zostera, at all sampling locations. CPUEs of fishes were higher in Zostera primarily due to the abundance of Gasterosteus aculeatus, Apeltes quadracus, Pungitius pungitius, Myoxocephalus aenaeus, and Cylcopterus lumpus. The fish community of mid-coast estuaries was dominated by young-of-the-year (YOY) and juvenile fishes and all of the habitat types function as nursery areas. Twelve species (38%) of commercial and recreational importance were collected in the three estuaries, but the percentage was higher in Casco Bay (44%) and the Weskeag River (46%). These species included Anguilla rostrata, Clupea harengus, Gadus morhua, Microgadus tomcod, Pollachius virens, Urophycis chuss, Urophycis regia, Urophycis tenuis, Osmerus mordax, Macrozoarces americanus, Tautogolabrus adspersus, and Pleuronectes americanus. Four species, G. morhua, M. tomcod, P. virens, and U. tenuis were more common in spring than summer or autumn. P. americanus was most abundant in summer followed by spring and autumn. This study documents the importance of shallow estuarine areas in Maine as nurseries for these species.

  16. Fishing effort and the impact of fishing gears and fishing methods on fishes and fisheries of Kyoga basin lakes

    OpenAIRE

    Kamanyi, J.R.

    2001-01-01

    Lake Kyoga at the time of Worthington Survey (Worthington, 1929) was fished by only natives around it. The fishing gears consisted of locally made basket traps, hooks and seine nets made out of papyrus. Fishing was mainly during the dry season as in wet season, the fishers would revert to crop growing. During 1937 to 1950s Oreochromis variabilis, oreochromis esculentus (Ngege) and Protopterus aethiopicus (Mamba) were the most important commercial fish species and contributed over 95% to the t...

  17. Habitat dynamics, marine reserve status, and the decline and recovery of coral reef fish communities.

    Science.gov (United States)

    Williamson, David H; Ceccarelli, Daniela M; Evans, Richard D; Jones, Geoffrey P; Russ, Garry R

    2014-02-01

    Severe climatic disturbance events often have major impacts on coral reef communities, generating cycles of decline and recovery, and in some extreme cases, community-level phase shifts from coral-to algal-dominated states. Benthic habitat changes directly affect reef fish communities, with low coral cover usually associated with low fish diversity and abundance. No-take marine reserves (NTRs) are widely advocated for conserving biodiversity and enhancing the sustainability of exploited fish populations. Numerous studies have documented positive ecological and socio-economic benefits of NTRs; however, the ability of NTRs to ameliorate the effects of acute disturbances on coral reefs has seldom been investigated. Here, we test these factors by tracking the dynamics of benthic and fish communities, including the important fishery species, coral trout (Plectropomus spp.), over 8 years in both NTRs and fished areas in the Keppel Island group, Great Barrier Reef, Australia. Two major disturbances impacted the reefs during the monitoring period, a coral bleaching event in 2006 and a freshwater flood plume in 2011. Both disturbances generated significant declines in coral cover and habitat complexity, with subsequent declines in fish abundance and diversity, and pronounced shifts in fish assemblage structure. Coral trout density also declined in response to the loss of live coral, however, the approximately 2:1 density ratio between NTRs and fished zones was maintained over time. The only post-disturbance refuges for coral trout spawning stocks were within the NTRs that escaped the worst effects of the disturbances. Although NTRs had little discernible effect on the temporal dynamics of benthic or fish communities, it was evident that the post-disturbance refuges for coral trout spawning stocks within some NTRs may be critically important to regional-scale population persistence and recovery.

  18. Habitat dynamics, marine reserve status, and the decline and recovery of coral reef fish communities.

    Science.gov (United States)

    Williamson, David H; Ceccarelli, Daniela M; Evans, Richard D; Jones, Geoffrey P; Russ, Garry R

    2014-02-01

    Severe climatic disturbance events often have major impacts on coral reef communities, generating cycles of decline and recovery, and in some extreme cases, community-level phase shifts from coral-to algal-dominated states. Benthic habitat changes directly affect reef fish communities, with low coral cover usually associated with low fish diversity and abundance. No-take marine reserves (NTRs) are widely advocated for conserving biodiversity and enhancing the sustainability of exploited fish populations. Numerous studies have documented positive ecological and socio-economic benefits of NTRs; however, the ability of NTRs to ameliorate the effects of acute disturbances on coral reefs has seldom been investigated. Here, we test these factors by tracking the dynamics of benthic and fish communities, including the important fishery species, coral trout (Plectropomus spp.), over 8 years in both NTRs and fished areas in the Keppel Island group, Great Barrier Reef, Australia. Two major disturbances impacted the reefs during the monitoring period, a coral bleaching event in 2006 and a freshwater flood plume in 2011. Both disturbances generated significant declines in coral cover and habitat complexity, with subsequent declines in fish abundance and diversity, and pronounced shifts in fish assemblage structure. Coral trout density also declined in response to the loss of live coral, however, the approximately 2:1 density ratio between NTRs and fished zones was maintained over time. The only post-disturbance refuges for coral trout spawning stocks were within the NTRs that escaped the worst effects of the disturbances. Although NTRs had little discernible effect on the temporal dynamics of benthic or fish communities, it was evident that the post-disturbance refuges for coral trout spawning stocks within some NTRs may be critically important to regional-scale population persistence and recovery. PMID:24634720

  19. Changes in habitat of fish populations: An inverse problem.

    Science.gov (United States)

    Levere, Kimberly M

    2016-08-01

    Mathematical modelling applies to a wide variety of application areas, and is an active area of research in many disciplines. It is often the case that accurate depiction of real-world phenomena require increasingly complex models. Unfortunately, this increased complexity in a model causes great difficulty when seeking solutions. What is more, developing a model with known parameters that produces results consistent with observed behaviors may prove to be a difficult or even impossible task. These difficulties have brought about an interest in inverse problems. In this paper we utilize a collage-based approach to solve an inverse problem for a model for the migration of three fish species through floodplain waters. A derivation of the mathematical model is presented and a generalized collage method is discussed and applied to this model to recover diffusion parameters. Theoretical and numerical particulars are discussed and results are presented. PMID:27245383

  20. Differential mercury transfer in the aquatic food web of a double basined lake associated with selenium and habitat

    International Nuclear Information System (INIS)

    Food web trophodynamics of total mercury (THg) and selenium (Se) were assessed for the double-basined ultraoligotrophic system of Lake Moreno, Patagonia. Each basin has differing proportions of littoral and pelagic habitats, thereby providing an opportunity to assess the importance of habitat (e.g. food web structure or benthic MeHg production) in the transfer of Hg and Se to top trophic fish species. Pelagic plankton, analyzed in three size classes (10–53, 53–200, and > 200 μm), had very high [THg], exceeding 200 μg g−1 dry weight (DW) in the smallest, and a low ratio of MeHg to THg (0.1 to 3%). In contrast, [THg] in littoral macroinvertebrates showed lower values (0.3 to 1.8 μg g−1 DW). Juvenile and small fish species feeding upon plankton had higher [THg] (0.2 to 8 μg g−1 muscle DW) compared to large piscivore fish species (0.1 to 1.6 μg g−1 muscle DW). Selenium concentrations exhibited a much narrower variation range than THg in the food web, varying from 0.5 to 2.7 μg g−1 DW. Molar Se:Hg ratios exceeded 1 for the majority of organisms in both basins, with most ratios exceeding 10. Using stable nitrogen isotopes as indicator of trophic level, no significant correlations were found with [THg], [Se] or Se:Hg. The apparent lack of biomagnification trends was attributed to elevated [THg] in plankton in the inorganic form mostly, as well as the possibility of consistent Se supply reducing the biomagnification in the food web of the organic portion of THg. Highlights: • Mercury was studied in the food web of Lake Moreno, Nahuel Huapi National Park. • Mercury trophic transfer was assessed by nitrogen stable isotope (δ15N) analysis. • Selenium was determined showing consistent source in pelagic and littoral organisms. • High mercury concentrations, mostly inorganic, were determined in plankton. • No mercury biomagnification was observed in Lake Moreno food web

  1. Differential mercury transfer in the aquatic food web of a double basined lake associated with selenium and habitat

    Energy Technology Data Exchange (ETDEWEB)

    Arcagni, Marina [Laboratorio de Análisis por Activación Neutrónica, Centro Atómico Bariloche, CNEA, Av. Bustillo km 9.5, 8400 Bariloche (Argentina); Campbell, Linda [Faculty of Science, Saint Mary' s University, 923 Robie Street, Halifax, Nova Scotia B3H 3C3 (Canada); Arribére, María A. [Laboratorio de Análisis por Activación Neutrónica, Centro Atómico Bariloche, CNEA, Av. Bustillo km 9.5, 8400 Bariloche (Argentina); Instituto Balseiro, Universidad Nacional de Cuyo and Comisión Nacional de Energía Atómica (Argentina); Marvin-DiPasquale, Mark [U.S. Geological Survey, 345 Middlefield Rd./MS 480, Menlo Park, CA 94025 (United States); Rizzo, Andrea [Laboratorio de Análisis por Activación Neutrónica, Centro Atómico Bariloche, CNEA, Av. Bustillo km 9.5, 8400 Bariloche (Argentina); CONICET (Argentina); Ribeiro Guevara, Sergio, E-mail: ribeiro@cab.cnea.gov.ar [Laboratorio de Análisis por Activación Neutrónica, Centro Atómico Bariloche, CNEA, Av. Bustillo km 9.5, 8400 Bariloche (Argentina)

    2013-06-01

    Food web trophodynamics of total mercury (THg) and selenium (Se) were assessed for the double-basined ultraoligotrophic system of Lake Moreno, Patagonia. Each basin has differing proportions of littoral and pelagic habitats, thereby providing an opportunity to assess the importance of habitat (e.g. food web structure or benthic MeHg production) in the transfer of Hg and Se to top trophic fish species. Pelagic plankton, analyzed in three size classes (10–53, 53–200, and > 200 μm), had very high [THg], exceeding 200 μg g{sup −1} dry weight (DW) in the smallest, and a low ratio of MeHg to THg (0.1 to 3%). In contrast, [THg] in littoral macroinvertebrates showed lower values (0.3 to 1.8 μg g{sup −1} DW). Juvenile and small fish species feeding upon plankton had higher [THg] (0.2 to 8 μg g{sup −1} muscle DW) compared to large piscivore fish species (0.1 to 1.6 μg g{sup −1} muscle DW). Selenium concentrations exhibited a much narrower variation range than THg in the food web, varying from 0.5 to 2.7 μg g{sup −1} DW. Molar Se:Hg ratios exceeded 1 for the majority of organisms in both basins, with most ratios exceeding 10. Using stable nitrogen isotopes as indicator of trophic level, no significant correlations were found with [THg], [Se] or Se:Hg. The apparent lack of biomagnification trends was attributed to elevated [THg] in plankton in the inorganic form mostly, as well as the possibility of consistent Se supply reducing the biomagnification in the food web of the organic portion of THg. Highlights: • Mercury was studied in the food web of Lake Moreno, Nahuel Huapi National Park. • Mercury trophic transfer was assessed by nitrogen stable isotope (δ{sup 15}N) analysis. • Selenium was determined showing consistent source in pelagic and littoral organisms. • High mercury concentrations, mostly inorganic, were determined in plankton. • No mercury biomagnification was observed in Lake Moreno food web.

  2. Evaluation and Monitoring of Idaho Habitat Enhancement and Anadromous Fish Natural Production : Annual Report 1986.

    Energy Technology Data Exchange (ETDEWEB)

    Petrosky, Charles E.; Holubetz, Terry B.

    1987-11-01

    The Idaho Department of Fish and Game (IDFG) has been conducting an evaluation of existing and proposed habitat improvement projects for anadromous fish in the Clearwater River and Salmon River drainages over the last 3 years. Projects included in the evaluation are funded by or proposed for funding by the Bonneville Power Administration (BPA) under the Northwest Power Planning Act as off-site mitigation for downstream hydropower development on the Snake and Columbia rivers. This evaluation project is also funded under the same authority. A mitigation record is being developed to use increased smolt production (i.e., yield) at full-seeding as the best measure of benefit from a habitat enhancement project. Determination of full benefit from a project depends on completion or maturation of the project and presence of adequate numbers of fish to document actual increases in fish production. The depressed nature of upriver anadromous stocks have precluded measuring full benefits of any habitat enhancement project in Idaho. Partial benefit will be credited to the mitigation record in the interim period of run restoration.

  3. Estimating fish exploitation and aquatic habitat loss across diffuse inland recreational fisheries.

    Directory of Open Access Journals (Sweden)

    Derrick Tupper de Kerckhove

    Full Text Available The current state of many freshwater fish stocks worldwide is largely unknown but suspected to be vulnerable to exploitation from recreational fisheries and habitat degradation. Both these factors, combined with complex ecological dynamics and the diffuse nature of inland fisheries could lead to an invisible collapse: the drastic decline in fish stocks without great public or management awareness. In this study we provide a method to address the pervasive knowledge gaps in regional rates of exploitation and habitat degradation, and demonstrate its use in one of North America's largest and most diffuse recreational freshwater fisheries (Ontario, Canada. We estimated that (1 fish stocks were highly exploited and in apparent danger of collapse in management zones close to large population centres, and (2 fish habitat was under a low but constant threat of degradation at rates comparable to deforestation in Ontario and throughout Canada. These findings confirm some commonly held, but difficult to quantify, beliefs in inland fisheries management but also provide some further insights including (1 large anthropogenic projects greater than one hectare could contribute much more to fish habitat loss on an area basis than the cumulative effect of smaller projects within one year, (2 hooking mortality from catch-and-release fisheries is likely a greater source of mortality than the harvest itself, and (3 in most northern management zones over 50% of the fisheries resources are not yet accessible to anglers. While this model primarily provides a framework to prioritize management decisions and further targeted stock assessments, we note that our regional estimates of fisheries productivity and exploitation were similar to broadscale monitoring efforts by the Province of Ontario. We discuss the policy implications from our results and extending the model to other jurisdictions and countries.

  4. A re-examination of fish estuarine dependence: Evidence for connectivity between estuarine and ocean habitats

    Science.gov (United States)

    Able, Kenneth W.

    2005-07-01

    Our understanding of the recruitment of estuarine fishes has been strongly influenced by two views: first, that estuaries are important nurseries and second, that many species are estuarine dependent. Based on an attempt to review the world-wide literature on these topics, it appears that both of these views have merit but could benefit from additional attention and clarification. The term estuarine dependency is used in a variety of ways depending on the author and context and even how one defines estuary. Further, and perhaps most importantly, we often lack the comparative data on habitat use by fishes in the ocean vs. the estuary to make judgments about dependency. To that end we have analyzed the distribution patterns of fish species along the estuarine-coastal ocean ecotone in southern New Jersey, U.S. to evaluate the fish response. As a result, it appears the degree of estuarine use is quite variable among species, as well as at geographic, annual and cohort-specific scales. Thus, further synthesis is necessary and it might focus on: first, more information on fish use in different types of estuaries across a broad geographical range; second, a better understanding of the functional significance of habitats across the habitat landscapes of the estuary-ocean ecotone; third, any further synthesis needs to incorporate of the role of biotic variables (e.g. predation, competition) in order to enhance our understanding of the degree of estuarine dependency; fourth, we need to determine how freshwater flow into estuaries might influence habitat use especially with regard to the potential role of the offshore estuary.

  5. Estuarine, intertidal and subtidal wetland habitat types in Klag Bay, Chichagof Island, Alaska

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Six major estuarine intertidal and subtidal wetland habitat types were identified within the inner basin of Klag Bay. These habitat types are mapped in Fig. 3. The...

  6. Early life history and habitat ecology of estuarine fishes: responses to natural and human induced change

    Directory of Open Access Journals (Sweden)

    Kenneth Able

    2015-12-01

    Full Text Available Our understanding of the early life history of fishes and their habitats has proceeded from basic natural history to ecology, but we often need to return to natural history to address deficiencies in conceptual and quantitative models of ecosystems. This understanding is further limited by the complex life history of fishes and the lack of appreciation of shifting baselines in estuaries. These inadequacies are especially evident when we try to address the effects of human influences, e.g. fishing, urbanization, and climate change. Often our baselines are inadequate or inaccurate. Our work has detected these along the coasts of the U.S. in extensive time series of larval fish ingress into estuaries, studies of the effects of urbanization, and responses to catastrophes such as the BP oil spill. Long-term monitoring, especially, continues to provide critical insights

  7. Tucano Sul Basin: petroleum habitat; Bacia de Tucano Sul - habitat do petroleo

    Energy Technology Data Exchange (ETDEWEB)

    Schaller, Hannfried; Magalhaes, Celso Carvalho; Carvalho, Renato Kramberger

    2008-07-01

    The South Tucano Basin is located in the State of Bahia, and is an integrating part of the Northeast Brazilian intracratonic graben system which embraces the Jatoba, Tucano (North, Central and South), and Reconcavo Basins. It comprises a Late Jurassic - Early Cretaceous system of half grabens that evolved during the preliminary stages of continental break related to the South Atlantic opening, from which it was aborted during the Aptian. Close to one hundred wells have so far been drilled in the area, leading to the discovery of about 35 million m{sup 3} (220 mmboe) of oil equivalent, comprised in about ten small oil and gas pools, among which Conceicao, Querera, Lagoa Branca, Estacao de Irai and Sempre Viva . Organic shales, that area found in the lower half of the Candeias Fm, are interpreted as the main source rocks, and in regard to the stratigraphic position of the oil pool, three petroleum-systems are recognized in the basin: Candeias-Sergi; Candeias-Candeias, and Candeias-Ilhas. (author)

  8. Simulating mechanisms for dispersal, production and stranding of small forage fish in temporary wetland habitats

    Science.gov (United States)

    Yurek, Simeon; DeAngelis, Donald L.; Trexler, Joel C.; Jopp, Fred; Donalson, Douglas D.

    2013-01-01

    Movement strategies of small forage fish (<8 cm total length) between temporary and permanent wetland habitats affect their overall population growth and biomass concentrations, i.e., availability to predators. These fish are often the key energy link between primary producers and top predators, such as wading birds, which require high concentrations of stranded fish in accessible depths. Expansion and contraction of seasonal wetlands induce a sequential alternation between rapid biomass growth and concentration, creating the conditions for local stranding of small fish as they move in response to varying water levels. To better understand how landscape topography, hydrology, and fish behavior interact to create high densities of stranded fish, we first simulated population dynamics of small fish, within a dynamic food web, with different traits for movement strategy and growth rate, across an artificial, spatially explicit, heterogeneous, two-dimensional marsh slough landscape, using hydrologic variability as the driver for movement. Model output showed that fish with the highest tendency to invade newly flooded marsh areas built up the largest populations over long time periods with stable hydrologic patterns. A higher probability to become stranded had negative effects on long-term population size, and offset the contribution of that species to stranded biomass. The model was next applied to the topography of a 10 km × 10 km area of Everglades landscape. The details of the topography were highly important in channeling fish movements and creating spatiotemporal patterns of fish movement and stranding. This output provides data that can be compared in the future with observed locations of fish biomass concentrations, or such surrogates as phosphorus ‘hotspots’ in the marsh.

  9. Influence of food availability on the spatial distribution of juvenile fish within soft sediment nursery habitats

    Science.gov (United States)

    Tableau, A.; Brind'Amour, A.; Woillez, M.; Le Bris, H.

    2016-05-01

    Soft sediments in coastal shallow waters constitute nursery habitats for juveniles of several flatfishes. The quality of a nursery is defined by its capacity to optimize the growth and the survival of juvenile fish. The influence of biotic factors, such as food availability, is poorly studied at the scale of a nursery ground. Whether food availability limits juvenile survival is still uncertain. A spatial approach is used to understand the influence of food availability on the distribution of juvenile fish of various benthic and demersal species in the Bay of Vilaine (France), a productive nursery ground. We quantified the spatial overlap between benthic macro-invertebrates and their predators (juvenile fish) to assess if the latter were spatially covering the most productive areas of the Bay. Three scenarios describing the shapes of the predator-prey spatial relationship were tested to quantify the strength of the relationship and consequently the importance of food availability in determining fish distribution. Our results underline that both food availability and fish densities vary greatly over the nursery ground. When considering small organisational levels (e.g., a single fish species), the predator-prey spatial relationship was not clear, likely because of additional environmental effects not identified here; but at larger organisational level (the whole juvenile fish community), a strong overlap between the fish predators and their prey was identified. The evidence that fish concentrate in sectors with high food availability suggests that either food is the limiting factor in that nursery or/and fish display behavioural responses by optimising their energetic expenditures associated with foraging. Further investigations are needed to test the two hypotheses and to assess the impact of benthic and demersal juvenile fish in the food web of coastal nurseries.

  10. Potential of Pigeon Creek, San Salvador, Bahamas, as Nursery Habitat for Juvenile Reef Fish

    Directory of Open Access Journals (Sweden)

    Conboy, Ian Christopher

    2011-10-01

    Full Text Available This project assessed the significance of Pigeon Creek, San Salvador, Bahamas as a nursery habitat for coral reef fishes. Pigeon Creek’s perimeter is lined with mangrove and limestone bedrock. The bottom is sand or seagrass and ranges in depth from exposed at low tide to a 3-m deep, tide-scoured channel. In June 2006 and January 2007, fish were counted and their maturity was recorded while sampling 112 of 309 possible 50-m transects along the perimeter of the Pigeon Creek. Excluding silversides (Atherinidae, 52% of fish counted, six families each comprised >1% of the total abundance (Scaridae/parrotfishes, 35.3%; Lutjanidae/snappers, 23.9%; Haemulidae/grunts, 21.0%; Gerreidae/mojarras, 8.5%; Pomacentridae/damselfishes, 6.1%; Labridae/wrasses, 2.4%. There were few differences in effort-adjusted counts among habitats (mangrove, bedrock, mixed, sections (north, middle, southwest and seasons (summer 2006 and winter 2007. Red Mangrove (Rhizophora mangle, covering 68% of the perimeter was where 62% of the fish were counted. Snappers, grunts and parrotfishes are important food fishes and significant families in terms of reef ecology around San Salvador. Mangrove was the most important habitat for snappers and grunts; bedrock was most important for parrotfishes. The southwest section was important for snappers, grunts and parrotfishes, the north section for grunts and parrotfishes, and the middle section for snappers. Among the non-silverside fish counted, 91.2% were juveniles. These results suggest that Pigeon Creek is an important nursery for the coral reefs surrounding San Salvador and should be protected from potential disturbances.

  11. Habitat characteristics and environmental parameters influencing fish assemblages of karstic pools in southern Mexico

    Directory of Open Access Journals (Sweden)

    María Eugenia Vega-Cendejas

    2013-01-01

    Full Text Available Fish assemblage structure was evaluated and compared among 36 karstic pools located within protected areas of the Calakmul Biosphere Reserve (southern Mexico and unprotected adjacent areas beyond the Reserve. Nonmetric multidimensional scaling (MDS, indicator species analysis (ISA, and canonical correspondence analysis (CCA were used to identify which environmental factors reflected local influences and to evaluate the correlation of these variables with fish assemblages structure. Thirty-one species were encountered in these karstic pools, some for the first time within the Reserve. These aquatic environments were separated into three groups based on physico-chemical characteristics. Although CCA identified significant associations between several fish species (based on their relative abundance and environmental variables (K, NH4, NO3, and conductivity, the most abundant species (Astyanax aeneus, Poecilia mexicana, and Gambusia sexradiata occur in most pools and under several environmental conditions. Baseline data on fish diversity along with a continued monitoring program are essential in order to evaluate the conservation status of fish assemblages and their habitats, as well as to measure the influence of anthropogenic impacts on pristine habitats such as the karstic pools of the Calakmul Biosphere Reserve.

  12. Distribution of fish in seagrass, mangroves and coral reefs: life-stage dependent habitat use in Honduras.

    Science.gov (United States)

    Jaxion-Harm, Jessica; Saunders, James; Speight, Martin R

    2012-06-01

    Many coral reef fish exhibit habitat partitioning throughout their lifetimes. Such patterns are evident in the Caribbean where research has been predominantly conducted in the Eastern region. This work addressed the paucity of data regarding Honduran reef fish distribution in three habitat types (seagrass, mangroves, and coral reefs), by surveying fish on the islands of Utila and Cayos Cochinos off the coast of Honduras (part of the Mesoamerican barrier reef). During July 2nd - Aug 27th 2007 and June 22nd - Aug 17th, 2008, visual surveys (SCUBA and snorkel) were performed in belt transects in different areas: eleven coral reef, six seagrass beds, and six mangroves sites. Juvenile densities and total habitat surface area were used to calculate nursery value of seagrass and mangroves. A total of 113 fish species from 32 families were found during underwater surveys. Multi-dimensional analyses revealed distinct clusters of fish communities in each habitat type by separating fish associated with seagrass beds, mangroves, and coral reefs. Coral reefs showed the highest mean fish species richness and were dominated by adult fish, while juvenile fish characterized seagrass beds and mangrove sites. Habitat use differed widely at the fish species level. Scarus iseri (Striped Parrotfish), the most abundant fish in this study, were found in all three habitat types, while Lutjanus apodus (Schoolmaster Snapper) juveniles were located primarily in mangroves before migrating to coral reefs. Many species used seagrass beds and mangroves as nurseries; however, the nursery value could not be generalized at the family level. Furthermore, for some fish species, nursery value varied between islands and sites. Our results suggest that connectivity of seagrass, mangrove, and coral reef sites at a species and site levels, should be taken into consideration when implementing policy and conservation practices.

  13. Anthropogenic habitat alteration induces rapid morphological divergence in a native stream fish

    OpenAIRE

    Franssen, Nathan R

    2011-01-01

    Anthropogenic habitat alteration creates novel environments that can alter selection pressures. Construction of reservoirs worldwide has disturbed riverine ecosystems by altering biotic and abiotic environments of impounded streams. Changes to fish communities in impoundments are well documented, but effects of those changes on native species persisting in reservoirs, which are presumably subjected to novel selective pressures, are largely unexplored. I assessed body shape variation of a nati...

  14. Fish assemblages of the upper Little Sioux River basin, Iowa, USA: Relationships with stream size and comparison with historical assemblages

    Science.gov (United States)

    Palic, D.; Helland, L.; Pedersen, B.R.; Pribil, J.R.; Grajeda, R.M.; Loan-Wilsey, Anna; Pierce, C.L.

    2007-01-01

    We characterized the fish assemblages in second to fifth order streams of the upper Little Sioux River basin in northwest Iowa, USA and compared our results with historical surveys. The fish assemblage consisted of over twenty species, was dominated numerically by creek chub, sand shiner, central stoneroller and other cyprinids, and was dominated in biomass by common carp. Most of the species and the great majority of all individuals present were at least moderately tolerant to environmental degradation, and biotic integrity at most sites was characterized as fair. Biotic integrity declined with increasing stream size, and degraded habitat in larger streams is a possible cause. No significant changes in species richness or the relative distribution of species' tolerance appear to have occurred since the 1930s.

  15. Contrasting changes in taxonomic vs. functional diversity of tropical fish communities after habitat degradation.

    Science.gov (United States)

    Villéger, Sébastien; Ramos Miranda, Julia; Flores Hernández, Domingo; Mouillot, David

    2010-09-01

    Human activities have strong impacts on ecosystem functioning through their effect on abiotic factors and on biodiversity. There is also growing evidence that species functional traits link changes in species composition and shifts in ecosystem processes. Hence, it appears to be of utmost importance to quantify modifications in the functional structure of species communities after human disturbance in addition to changes in taxonomic structure. Despite this fact, there is still little consensus on the actual impacts of human-mediated habitat alteration on the components of biodiversity, which include species functional traits. Therefore, we studied changes in taxonomic diversity (richness and evenness), in functional diversity, and in functional specialization of estuarine fish communities facing drastic environmental and habitat alterations. The Terminos Lagoon (Gulf of Mexico) is a tropical estuary of primary concern for its biodiversity, its habitats, and its resource supply, which have been severely impacted by human activities. Fish communities were sampled in four zones of the Terminos Lagoon 18 years apart (1980 and 1998). Two functions performed by fish (food acquisition and locomotion) were studied through the measurement of 16 functional traits. Functional diversity of fish communities was quantified using three independent components: richness, evenness, and divergence. Additionally, we measured the degree of functional specialization in fish communities. We used a null model to compare the functional and the taxonomic structure of fish communities between 1980 and 1998. Among the four largest zones studied, three did not show strong functional changes. In the northern part of the lagoon, we found an increase in fish richness but a significant decrease of functional divergence and functional specialization. We explain this result by a decline of specialized species (i.e., those with particular combinations of traits), while newly occurring species are

  16. Distribution, abundance, diversity and habitat associations of fishes across a bioregion experiencing rapid coastal development

    Science.gov (United States)

    McLean, Dianne L.; Langlois, Tim J.; Newman, Stephen J.; Holmes, Thomas H.; Birt, Matthew J.; Bornt, Katrina R.; Bond, Todd; Collins, Danielle L.; Evans, Scott N.; Travers, Michael J.; Wakefield, Corey B.; Babcock, Russ C.; Fisher, Rebecca

    2016-09-01

    Knowledge of the factors that influence spatial patterns in fish abundance, distribution and diversity are essential for informing fisheries and conservation management. The present study was conducted in the nearshore Pilbara bioregion of north-western Australia where the dynamic marine environment is characterised by large embayments, numerous islands and islets, coexisting with globally significant petrochemical and mineral industries. Within Western Australia, this nearshore bioregion has high biodiversity and is considered to play an essential role in the recruitment of species of commercial importance. To better inform future investigations into both ecological processes and planning scenarios for management, a rapid assessment of the distribution, abundance and associations with nearshore habitats of fishes across the region was conducted. Baited remote underwater stereo-video systems (stereo-BRUVs) were used to simultaneously sample the fish assemblage and habitat composition. Generalised additive mixed models (GAMMs) were used to determine whether the abundance of fishes were related to habitat and a range of environmental variables (visibility, depth, distance to 30 m and 200 m depth isobars, boat ramps and the nearest large embayment (Exmouth Gulf). A diverse fish assemblage comprising 343 species from 58 families was recorded. The abundance and distribution patterns of fishery-target species and of the five most common and abundant species and families were linked positively with areas of high relief, hard coral cover, reef and macroalgae and negatively with the distance to the nearest oceanic waters (200 m depth isobar). This study provides information that can contribute to future marine spatial planning scenarios for management of the Pilbara using a unique, analytical approach that has broad application in biogeography.

  17. Trip report Rainwater Basin Nebraska

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report is a summary a trip to Rainwater Basin Wetland Management District in 1991, and focuses on the hydrology and soil habitat types. It is part of the...

  18. Nocturnal Fish Use of New Jersey Marsh Creek and Adjacent Bay Shoal Habitats

    Science.gov (United States)

    Rountree, R. A.; Able, K. W.

    1997-06-01

    Night-time sampling with gill nets in the Little Egg Harbor estuary revealed a component of the estuarine fish fauna, hitherto poorly documented, which is comprised of relatively large size classes of juvenile and adult life history stages. The fishesMustelus canis, Pomatomus saltatrix, Paralichthys dentatus, Brevoortia tyrannus, Prionotus evolansandAlosa mediocriswere the most abundant fishes captured. These observations suggest that Mid-Atlantic Bight estuaries are important nurseries for juvenile stages beyond the first year, as well as for the young of the year (YOY). Although many other studies emphasise the importance of estuaries as nurseries for YOY stages, the importance of estuaries to later juvenile life stages has been largely overlooked. This component of estuarine fish fauna has been poorly represented in previous North American studies because of probable gear avoidance, and because most studies are conducted primarily during the day. The authors hypothesise that these later juvenile stages are likely to be important estuarine faunal components in other geographic regions, as well as in the Mid-Atlantic Bight. A descriptive comparison of catches between ebb and flood tide stages, and between bay shoal and tidal marsh creek habitats, suggests that later juvenile and adult stages of several species make tidal migrations into shallow estuarine habitats, such as shoals and marsh creeks, during the night hours.

  19. The role of nursery habitats and climate variability in reef fish fisheries in the Gulf of California

    OpenAIRE

    Aburto-Oropeza, Marco Octavio

    2009-01-01

    One of the most important services that coastal habitats supply is the provision of seafood that feeds people and supports local fishing economies. Despite this importance, there has been little analysis of the ecological processes that contribute to the local economies, and the impact that human activities have on these processes. The objective of this thesis is to study the relationship between coastal habitats and the dynamics of commercial reef fishes in the Gulf of California, and estima...

  20. Effects of water use and land use on streamflow and aquatic habitat in the Sudbury and Assabet River Basins, Massachusetts

    Science.gov (United States)

    Zarriello, Phillip J.; Parker, Gene W.; Armstrong, David S.; Carlson, Carl S.

    2010-01-01

    associated with the loss of deep-rooted vegetation. Simulations of reactivating production wells near the north end of Lake Cochituate indicate pumping could substantially affect lake levels and flows at the lake outlet or in nearby reaches in the Sudbury River during periods of low flow, but the effects vary depending on the source of the water to the wells, which is largely unknown. Chapter 2 of the report covers the fish-community assessment and comparison of streamflow-setting standards for protecting aquatic habitat. The fish-community assessment indicates the main stems of the Sudbury and Assabet Rivers are dominated by macrohabitat generalists. Water temperatures recorded in seven free-flowing reaches in the upper Sudbury River Basin at three sites unaffected by withdrawals or impoundments are generally suitable for cold-water fish; however, summer temperatures often rose to a level considered critical to long-term survival of brook trout. At four sites downstream from withdrawals or reservoirs, or both, summer water temperatures were often in the upper critical range for brook trout survival. Physically and statistically based methods for determining streamflows for protecting aquatic habitat were applied at 10 selected riffle sites in the Sudbury and Assabet River Basins. Physically based methods, R2Cross and Wetted-Perimeter, use site-specific physical and hydraulic information and a one-dimensional hydraulics model, HEC-RAS, to determine flows that meet the criteria set forth by the method. The median flow that meets 2-of-3 of the R2Cross hydraulic criteria (percentage of bankfull wetted perimeter, average velocity, and mean depth) ranged from about 0.07 to 0.72 cubic feet per second per square mile (ft3/s/mi2) with an overall median of about 0.24 ft3/s/mi2; the median Wetted-Perimeter target flow ranged from about 0.10 to 0.51 ft3/s/mi2 with an overall median of about 0.25 ft3/s/mi2. Statistically based methods?Tennant, New England Aquatic Base Flow (ABF)

  1. Reserve network planning for fishes in the middle and lower Yangtze River basin by systematic conservation approaches.

    Science.gov (United States)

    Huang, Xinyi; Li, Fan; Chen, Jiakuan

    2016-03-01

    Although China has established more than 600 wetland nature reserves, conservation gaps still exist for many species, especially for freshwater fishes. Underlying this problem is the fact that top-level planning is missing in the construction of nature reserves. To promote the development of nature reserves for fishes, this study took the middle and lower reaches of the Yangtze River basin (MLYRB) as an example to carry out top-level reserve network planning for fishes using approaches of systematic conservation planning. Typical fish species living in freshwater habitats were defined and considered in the planning. Based on sample data collected from large quantities of literatures, continuous distribution patterns of 142 fishes were obtained with species distribution modeling and subsequent processing, and the distributions of another eleven species were artificially designated. With the distribution pattern of species, Marxan was used to carry out conservation planning. To obtain ideal solutions with representativeness, persistence, and efficiency, parameters were set with careful consideration regarding existing wetland reserves, human disturbances, hydrological connectivity, and representation targets of species. Marxan produced the selection frequency of planning units (PUs) and a best solution. Selection frequency indicates the relative protection importance of a PU. The best solution is a representative of ideal fish reserve networks. Both of the PUs with high selection frequency and those in the best solution have low proportions included in existing wetland nature reserves, suggesting that there are significant conservation gaps for fish species in MLYRB. The best solution could serve as a reference for establishing a fish reserve network in the MLYRB. There is great flexibility for replacing selected PUs in the solution, and such flexibility facilitates the implementation of the solution in reality in case of unexpected obstacles. Further, we suggested

  2. Optimising stereo baited underwater video for sampling fish and invertebrates in temperate coastal habitats

    Science.gov (United States)

    Unsworth, R. K. F.; Peters, J. R.; McCloskey, R. M.; Hinder, S. L.

    2014-10-01

    Stereo Baited Remote Underwater Video systems (BRUVs) provide a quantitative sampling method for assessing mobile fauna in a range of habitat types and environments. This non-destructive and cost-effective technique is increasingly used for assessing estuarine, coastal and marine fauna. Although single camera systems have been used to assess the relative abundance (Nmax) of marine fish and invertebrates in low visibility North Atlantic near shore and coastal waters, stereo systems remain in their infancy within such environments and their use requires validation. Stereo systems that measure fish and invertebrate size enable size-frequency analysis of populations, providing critical information about life history and population status. We investigated the performance and efficacy of stereo BRUV systems within Welsh shallow coastal waters to test the effectiveness of this method. Data are presented on the capacity of the system to measure fish and invertebrate size under the constraints of low visibility (diversity. Our study recorded 19 species of mobile fauna with species-time accumulation curves providing evidence that a minimum deployment time of 1 h is required to sample 66% of the fish species, and 2 h to sample 83%. Results suggest that the efficiency of surveys for target species (e.g. gadoids) could be maximised by modifying the sampling duration between 1 h and 2 h. The study also demonstrates that measurements of fish and invertebrate length could be taken on 41% of individuals (of those counted in relative abundance measures using Nmax), a statistic that varies between species. This indicates a need to modify the construction of the equipment for improved fish assemblage size frequency analysis. This is particularly relevant in areas and habitats where seine netting and trawling are not possible. We describe how the system can be modified for optimised usage within low visibility waters and suggest potential uses of the system.

  3. Fish assemblages and environmental variables associated with hard-rock mining in the Coeur d'Alene River basin, Idaho

    Science.gov (United States)

    Maret, Terry R.; MacCoy, Dorene E.

    2002-01-01

    As part of the U.S. Geological Survey's National Water Quality Assessment Program, fish assemblages, environmental variables, and associated mine densities were evaluated at 18 test and reference sites during the summer of 2000 in the Coeur d'Alene and St. Regis river basins in Idaho and Montana. Multimetric and multivariate analyses were used to examine patterns in fish assemblages and the associated environmental variables representing a gradient of mining intensity. The concentrations of cadmium (Cd), lead (Pb), and zinc (Zn) in water and streambed sediment found at test sites in watersheds where production mine densities were at least 0.2 mines/km2 (in a 500-m stream buffer) were significantly higher than the concentrations found at reference sites. Many of these metal concentrations exceeded Ambient Water Quality Criteria (AWQC) and the Canadian Probable Effect Level guidelines for streambed sediment. Regression analysis identified significant relationships between the production mine densities and the sum of Cd, Pb, and Zn concentrations in water and streambed sediment (r2 = 0.69 and 0.66, respectively; P River basin contained fewer native fish and lower abundances as a result of metal enrichment, not physical habitat degradation. Typically, salmonids were the predominant species at test sites where Zn concentrations exceeded the acute AWQC. Cottids were absent at these sites, which suggests that they are more severely affected by elevated metals than are salmonids.

  4. Using otolith microchemistry and shape to assess the habitat value of oil structures for reef fish.

    Science.gov (United States)

    Fowler, Ashley M; Macreadie, Peter I; Bishop, David P; Booth, David J

    2015-05-01

    Over 7500 oil and gas structures (e.g. oil platforms) are installed in offshore waters worldwide and many will require decommissioning within the next two decades. The decision to remove such structures or turn them into reefs (i.e. 'rigs-to-reefs') hinges on the habitat value they provide, yet this can rarely be determined because the residency of mobile species is difficult to establish. Here, we test a novel solution to this problem for reef fishes; the use of otolith (earstone) properties to identify oil structures of residence. We compare the otolith microchemistry and otolith shape of a site-attached coral reef fish (Pseudanthias rubrizonatus) among four oil structures (depth 82-135 m, separated by 9.7-84.2 km) on Australia's North West Shelf to determine if populations developed distinct otolith properties during their residency. Microchemical signatures obtained from the otolith edge using laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) differed among oil structures, driven by elements Sr, Ba and Mn, and to a lesser extent Mg and Fe. A combination of microchemical data from the otolith edge and elliptical Fourier (shape) descriptors allowed allocation of individuals to their 'home' structure with moderate accuracy (overall allocation accuracy: 63.3%, range: 45.5-78.1%), despite lower allocation accuracies for each otolith property in isolation (microchemistry: 47.5%, otolith shape: 45%). Site-specific microchemical signatures were also stable enough through time to distinguish populations during 3 separate time periods, suggesting that residence histories could be recreated by targeting previous growth zones in the otolith. Our results indicate that reef fish can develop unique otolith properties during their residency on oil structures which may be useful for assessing the habitat value of individual structures. The approach outlined here may also be useful for determining the residency of reef fish on artificial reefs, which would

  5. Demersal fish distribution and habitat use within and near Baltimore and Norfolk Canyons, U.S. Middle Atlantic Slope

    Science.gov (United States)

    Ross, Steve W.; Rhode, Mike; Quattrini, Andrea M.

    2015-01-01

    Numerous submarine canyons along the United States middle Atlantic continental margin support enhanced productivity, diverse and unique habitats, active fisheries, and are vulnerable to various anthropogenic disturbances. During two cruises (15 Aug–2 Oct 2012 and 30 Apr–27 May 2013), Baltimore and Norfolk canyons and nearby areas (including two cold seeps) were intensively surveyed to determine demersal fish distributions and habitat associations. Overall, 34 ROV dives (234–1612 m) resulted in 295 h of bottom video observations and numerous collections. These data were supplemented by 40, 30-min bottom trawl samples. Fish observations were assigned to five general habitat designations: 1) sand-mud (flat), 2) sloping sand-mud with burrows, 3) low profile gravel, rock, boulder, 4) high profile, canyon walls, rocks or ridges, and 5) seep-mixed hard and soft substrata, the later subdivided into seven habitats based on amounts of dead mussel and rock cover. The influence of corals, sponges and live mussels (seeps only) on fish distributions was also investigated. Both canyon areas supported abundant and diverse fish communities and exhibited a wide range of habitats, including extensive areas of deep-sea corals and sponges and two nearby methane seeps (380–430 m, 1455–1610 m). All methods combined yielded a total of 123 species of fishes, 12 of which are either new records for this region or have new range data. Depth was a major factor that separated the fish faunas into two zones with a boundary around 1400 m. Fishes defining the deeper zone included Lycodes sp.,Dicrolene introniger, Gaidropsaurus ensis, Hydrolagus affinis, Antimora rostrata, andAldrovandia sp. Fishes in the deep zone did not exhibit strong habitat affinities, despite the presence of a quite rugged, extensive methane seep. We propose that habitat specificity decreases with increasing depth. Fishes in the shallower zone, characterized by Laemonema sp., Phycis chesteri, Nezumia bairdii, Brosme

  6. Mangrove habitat use by juvenile reef fish: meta-analysis reveals that tidal regime matters more than biogeographic region.

    Directory of Open Access Journals (Sweden)

    Mathias M Igulu

    Full Text Available Identification of critical life-stage habitats is key to successful conservation efforts. Juveniles of some species show great flexibility in habitat use while other species rely heavily on a restricted number of juvenile habitats for protection and food. Considering the rapid degradation of coastal marine habitats worldwide, it is important to evaluate which species are more susceptible to loss of juvenile nursery habitats and how this differs across large biogeographic regions. Here we used a meta-analysis approach to investigate habitat use by juvenile reef fish species in tropical coastal ecosystems across the globe. Densities of juvenile fish species were compared among mangrove, seagrass and coral reef habitats. In the Caribbean, the majority of species showed significantly higher juvenile densities in mangroves as compared to seagrass beds and coral reefs, while for the Indo-Pacific region seagrass beds harbored the highest overall densities. Further analysis indicated that differences in tidal amplitude, irrespective of biogeographic region, appeared to be the major driver for this phenomenon. In addition, juvenile reef fish use of mangroves increased with increasing water salinity. In the Caribbean, species of specific families (e.g. Lutjanidae, Haemulidae showed a higher reliance on mangroves or seagrass beds as juvenile habitats than other species, whereas in the Indo-Pacific family-specific trends of juvenile habitat utilization were less apparent. The findings of this study highlight the importance of incorporating region-specific tidal inundation regimes into marine spatial conservation planning and ecosystem based management. Furthermore, the significant role of water salinity and tidal access as drivers of mangrove fish habitat use implies that changes in seawater level and rainfall due to climate change may have important effects on how juvenile reef fish use nearshore seascapes in the future.

  7. Washington Phase II Fish Diversion Screen Evaluations in the Yakima River Basin, 1998.

    Energy Technology Data Exchange (ETDEWEB)

    Blanton, S.L.; McMichael, Geoffrey A.; Neitzel, D.A.

    1999-12-01

    Pacific Northwest National Laboratory (PNNL) evaluated 19 Phase II screen sites in the Yakima River Basin as part of a multi-year study for the Bonneville Power Administration (BPA) on the effectiveness of fish screening devices. The sites were examined to determine if they were being effectively operated and maintained to provide fish a safe, efficient return to the Yakima River.

  8. Channel morphodynamics and habitat recovery in a river reach affected by gravel-mining (River Ésera, Ebro basin)

    Science.gov (United States)

    Lopez-Tarazon, J. A.; Lobera, G.; Andrés-Doménech, I.; Martínez-Capel, F.; Muñoz-Mas, R.; Vallés, F.; Tena, A.; Vericat, D.; Batalla, R. J.

    2012-04-01

    Physical processes in rivers are the result of the interaction between flow regime and hydraulics, morphology, sedimentology and sediment transport. The frequency and magnitude of physical disturbance (i.e. bed stability) control habitat integrity and, consequently, ecological diversity of a particular fluvial system. Most rivers experience human-induced perturbations that alter such hydrosedimentary equilibrium, thus affecting the habitat of aquatic species. A dynamic balance may take long time to be newly attained. Within this context, gravel mining is well known to affect channel characteristics mostly at the local scale, but its effect may also propagate downstream and upstream. Sedimentary forms are modified during extraction and habitat features are reduced or even eliminated. Effects tend to be most acute in contrasted climatic environments, such as the Mediterranean areas, in which climatic and hydrological variability maximises effects of impacts and precludes short regeneration periods. Present research focuses on the evolution of a river reach, which has experienced an intense gravel extraction. The selected area is located in the River Ésera (Ebro basin), where interactions between morphodynamics and habitat recovery are examined. Emphasis is put on monitoring sedimentary, morphological and hydraulic variables to later compare pre (t0) and post (t1, t2... tn) extraction situations. Methodology for all time monitoring steps (i.e. ti) includes: i) characterization of grain size distribution at all of the different hydromorphological units within the reach; ii) description of channel morphology (together with changes before and after floods) by means of close-range aerial photographs, which are taken with a digital camera attached to a 1m3 helium balloon (i.e. BLIMP); and iii) determination of flow parameters from 2D hydraulic modelling that is based on detailed topographical data obtained from Leica® GNSS/GPS and robotic total station, and River

  9. Linking hydrologic, physical and chemical habitat environments for the potential assessment of fish community rehabilitation in a developing city

    Science.gov (United States)

    Zhao, C. S.; Yang, S. T.; Liu, C. M.; Dou, T. W.; Yang, Z. L.; Yang, Z. Y.; Liu, X. L.; Xiang, H.; Nie, S. Y.; Zhang, J. L.; Mitrovic, S. M.; Yu, Q.; Lim, R. P.

    2015-04-01

    Aquatic ecological rehabilitation is increasingly attracting considerable public and research attention. An effective method that requires less data and expertise would help in the assessment of rehabilitation potential and in the monitoring of rehabilitation activities as complicated theories and excessive data requirements on assemblage information make many current assessment models expensive and limit their wide use. This paper presents an assessment model for restoration potential which successfully links hydrologic, physical and chemical habitat factors to fish assemblage attributes drawn from monitoring datasets on hydrology, water quality and fish assemblages at a total of 144 sites, where 5084 fish were sampled and tested. In this model three newly developed sub-models, integrated habitat index (IHSI), integrated ecological niche breadth (INB) and integrated ecological niche overlap (INO), are established to study spatial heterogeneity of the restoration potential of fish assemblages based on gradient methods of habitat suitability index and ecological niche models. To reduce uncertainties in the model, as many fish species as possible, including important native fish, were selected as dominant species with monitoring occurring over several seasons to comprehensively select key habitat factors. Furthermore, a detrended correspondence analysis (DCA) was employed prior to a canonical correspondence analysis (CCA) of the data to avoid the "arc effect" in the selection of key habitat factors. Application of the model to data collected at Jinan City, China proved effective reveals that three lower potential regions that should be targeted in future aquatic ecosystem rehabilitation programs. They were well validated by the distribution of two habitat parameters: river width and transparency. River width positively influenced and transparency negatively influenced fish assemblages. The model can be applied for monitoring the effects of fish assemblage restoration

  10. Avoiding conflicts and protecting coral reefs: Customary management benefits marine habitats and fish biomass

    KAUST Repository

    Campbell, Stuart J.

    2012-10-01

    Abstract One of the major goals of coral reef conservation is to determine the most effective means of managing marine resources in regions where economic conditions often limit the options available. For example, no-take fishing areas can be impractical in regions where people rely heavily on reef fish for food. In this study we test whether coral reef health differed among areas with varying management practices and socio-economic conditions on Pulau Weh in the Indonesian province of Aceh. Our results show that gear restrictions, in particular prohibiting the use of nets, were successful in minimizing habitat degradation and maintaining fish biomass despite ongoing access to the fishery. Reef fish biomass and hard-coral cover were two- to eight-fold higher at sites where fishing nets were prohibited. The guiding principle of the local customary management system, Panglima Laot, is to reduce conflict among community members over access to marine resources. Consequently, conservation benefits in Aceh have arisen from a customary system that lacks a specific environmental ethic or the means for strong resource-based management. Panglima Laot includes many of the features of successful institutions, such as clearly defined membership rights and the opportunity for resource users to be involved in making, enforcing and changing the rules. Such mechanisms to reduce conflict are the key to the success of marine resource management, particularly in settings that lack resources for enforcement. © 2012 Fauna & Flora International.

  11. Contrasting habitat associations of imperilled endemic stream fishes from a global biodiversity hot spot

    Directory of Open Access Journals (Sweden)

    Chakona Albert

    2012-09-01

    Full Text Available Abstract Background Knowledge of the factors that drive species distributions provides a fundamental baseline for several areas of research including biogeography, phylogeography and biodiversity conservation. Data from 148 minimally disturbed sites across a large drainage system in the Cape Floristic Region of South Africa were used to test the hypothesis that stream fishes have similar responses to environmental determinants of species distribution. Two complementary statistical approaches, boosted regression trees and hierarchical partitioning, were used to model the responses of four fish species to 11 environmental predictors, and to quantify the independent explanatory power of each predictor. Results Elevation, slope, stream size, depth and water temperature were identified by both approaches as the most important causal factors for the spatial distribution of the fishes. However, the species showed marked differences in their responses to these environmental variables. Elevation and slope were of primary importance for the laterally compressed Sandelia spp. which had an upstream boundary below 430 m above sea level. The fusiform shaped Pseudobarbus ‘Breede’ was strongly influenced by stream width and water temperature. The small anguilliform shaped Galaxias ‘nebula’ was more sensitive to stream size and depth, and also penetrated into reaches at higher elevation than Sandelia spp. and Pseudobarbus ‘Breede’. Conclusions The hypothesis that stream fishes have a common response to environmental descriptors is rejected. The contrasting habitat associations of stream fishes considered in this study could be a reflection of their morphological divergence which may allow them to exploit specific habitats that differ in their environmental stressors. Findings of this study encourage wider application of complementary methods in ecological studies, as they provide more confidence and deeper insights into the variables that should be

  12. Using new electrofishing technology to amp-up fish sampling in estuarine habitats.

    Science.gov (United States)

    Warry, F Y; Reich, P; Hindell, J S; McKenzie, J; Pickworth, A

    2013-04-01

    A prototype, boat-mounted electrofisher capable of operation in estuarine waters (where electrical conductivities often exceed 20 000 µS cm(-1)) was assessed. Electrofishing was compared to fyke and mesh netting in four riverine estuaries and to seining in a lagoonal estuary (consisting of a series of brackish coastal lakes separated from the sea by a barrier system of sand dunes). Fish assemblage composition, length distributions and the probability of detecting ecological fish guilds (relating to estuary use, position in the water column and body size) were compared among gears. The assemblage composition of electrofishing samples differed from those of fyke nets in all riverine estuaries and from mesh netting in two. The assemblage composition of electrofishing samples differed from those of seining in structured seagrass habitats of the lagoonal estuary. When all species were pooled, the electrofisher sampled a broader range of lengths than either fyke or mesh netting in riverine estuaries or seining in lagoonal estuaries. The bias of electrofishing and netting towards particular species and size classes affected the probability of detecting some ecological guilds, highlighting the potential implications of gear choice on understanding estuarine ecological function. The detection of guilds varied with gear type and environmental conditions, including stratification, water depth and surface electrical conductivity. Assessments with the aim to characterize the structure of fish assemblages will benefit from the use of multiple gears. Electrofishing shows immense promise for discretely sampling highly structured habitats to test hypotheses about their use. PMID:23557295

  13. TOTAL MERCURY (HgT) BIOACCUMULATION AND FISH FOOD HABITS IN NEGRO RIVER BASIN, AMAZON, BRAZIL

    OpenAIRE

    Jean Louchard Ferreira Soares; Ynglea Georgina de Freitas Goch; José Reinaldo Pacheco Peleja; Bruce Rider Forsberg; Edivaldo Júnior de Souza Lemos; Otávio Peleja de Sousa

    2016-01-01

    In the Amazon, the fish is the main nutritional source for the riverine. Thus, fish have been commonly used in environmental monitoring work to be good biomonitors. This study analyzed the total mercury concentration (THg) in fish of different species and feeding habits in order to investigate the existence of bioaccumulation in species in the basin of the Negro river and verify that the THg levels found are in accordance with the stipulated limit for consumption human. Sampling points were d...

  14. Geographical linkages between threats and imperilment in freshwater fish in the Mediterranean Basin

    OpenAIRE

    Clavero, Miguel; Hermoso, Virgilio; Levin, Noam; Kark, Salit

    2010-01-01

    Aim The level of imperilment of mediterranean freshwater fish is among the highest recorded for any group of organisms evaluated to date. Here, we describe the geographical patterns in the incidence of threats affecting mediterranean freshwater fish and test whether the effects of specific threats are spatially related to the degree of imperilment of fish faunas. Location The Mediterranean Basin Biome. Methods From the IUCN Red List, we recorded the six main threats to 232 e...

  15. High-quality seed dispersal by fruit-eating fishes in Amazonian floodplain habitats.

    Science.gov (United States)

    Anderson, Jill T; Saldaña Rojas, Joe; Flecker, Alexander S

    2009-08-01

    Seed dispersal is a critical stage in the life history of plants. It determines the initial pattern of juvenile distribution, and can influence community dynamics and the evolutionary trajectories of individual species. Vertebrate frugivores are the primary vector of seed dispersal in tropical forests; however, most studies of seed dispersal focus on birds, bats and monkeys. Nevertheless, South America harbors at least 200 species of frugivorous fishes, which move into temporarily flooded habitats during lengthy flood seasons and consume fruits that fall into the water; and yet, we know remarkably little about the quality of seed dispersal they effect. We investigated the seed dispersal activities of two species of large-bodied, commercially important fishes (Colossoma macropomum and Piaractus brachypomus, Characidae) over 3 years in Pacaya-Samiria National Reserve (Peru). We assessed the diet of these fishes during the flood season, conducted germination trials with seeds collected from digestive tracts, and quantified fruit availability. In the laboratory, we fed fruits to captive Colossoma, quantified the proportion of seeds defecated by adult and juvenile fish, and used these seeds in additional germination experiments. Our results indicate that Colossoma and Piaractus disperse large quantities of seeds from up to 35% of the trees and lianas that fruit during the flood season. Additionally, these seeds can germinate after floodwaters recede. Overexploitation has reduced the abundance of our focal fish species, as well as changed the age structure of populations. Moreover, older fish are more effective seed dispersers than smaller, juvenile fish. Overfishing, therefore, likely selects for the poorest seed dispersers, thus disrupting an ancient interaction between seeds and their dispersal agents. PMID:19466459

  16. Variation in the visual habitat may mediate the maintenance of color polymorphism in a poeciliid fish.

    Directory of Open Access Journals (Sweden)

    Jorge L Hurtado-Gonzales

    Full Text Available The conspicuousness of animal signals is influenced by their contrast against the background. As such, signal conspicuousness will tend to vary in nature because habitats are composed of a mosaic of backgrounds. Variation in attractiveness could result in variation in conspecific mate choice and risk of predation, which, in turn, may create opportunities for balancing selection to maintain distinct polymorphisms. We quantified male coloration, the absorbance spectrum of visual pigments and the photic environment of Poecilia parae, a fish species with five distinct male color morphs: a drab (i.e., grey, a striped, and three colorful (i.e., blue, red and yellow morphs. Then, using physiological models, we assessed how male color patterns can be perceived in their natural visual habitats by conspecific females and a common cichlid predator, Aequidens tetramerus. Our estimates of chromatic and luminance contrasts suggest that the three most colorful morphs were consistently the most conspicuous across all habitats. However, variation in the visual background resulted in variation in which morph was the most conspicuous to females at each locality. Likewise, the most colorful morphs were the most conspicuous morphs to cichlid predators. If females are able to discriminate between conspicuous prospective mates and those preferred males are also more vulnerable to predation, variable visual habitats could influence the direction and strength of natural and sexual selection, thereby allowing for the persistence of color polymorphisms in natural environments.

  17. Restoration of fish passage: development and results of a master plan established for the Ruhr River Basin.

    Science.gov (United States)

    Weyand, M; Redeker, M; Nusch, E A

    2005-01-01

    According to the central aim of the European Water Framework Directive, the protection and sustained management of the aquatic ecological system, the ecological condition of a specific type of water, will be the primary parameter in future. Aiming at good ecological status in surface water bodies, population diversity and abundance of fish and macroinvertebrates is decisive. Free passage in river systems, to allow the natural migration of fish and all other aquatic organisms, is a prerequisite. To achieve this for the Ruhr River Basin a study has been commissioned in order to develop a master plan for river continuum restoration. Sustainable development aimed at promoting biodiversity in the surface water body system is a key objective. This project is complemented by investigations of the sediment--which is the nursery of the fish--in the rivers to identify river sections or tributaries which obviously provide a suitable habitat for the successful reproduction of big Salmonidae. The master plan illustrates the inherent problems of projects aimed at the restoration of fish passage in water bodies which are strongly affected by anthropogenic modifications. The results obtained may as well be transferred to other catchments with similar use patterns.

  18. Assessment of River Habitat Quality in the Hai River Basin, Northern China

    Directory of Open Access Journals (Sweden)

    Yuekui Ding

    2015-09-01

    Full Text Available We applied a river habitat quality (RHQ assessment method to the Hai River Basin (HRB; an important economic centre in China; to obtain baseline information for water quality improvement; river rehabilitation; and watershed management. The results of the assessment showed that the river habitat in the HRB is seriously degraded. Specifically; 42.41% of the sites; accounting for a river length of 3.31 × 104 km; were designated poor and bad. Habitat in the plain areas is seriously deteriorated; and nearly 50% of the sites; accounting for a river length of 1.65 × 104 km; had either poor or bad habitats. River habitat degradation was attributable to the limited width of the riparian zone (≤5 m; lower coverage of riparian vegetation (≤40%; artificial land use patterns (public and industrial land; frequent occurrence of farming on the river banks and high volumes of solid waste (nearly 10 m3; single flow channels; and rare aquatic plants (≤1 category. At the regional scale; intensive artificial land use types caused by urbanization had a significant impact on the RHQ in the HRB. RHQ was significantly and negatively correlated with farmland (r = 1.000; p < 0.01 and urban land (r = 0.998; p < 0.05; and was significantly and positively correlated with grassland and woodland (r = 1.000; p < 0.01. Intensive artificial land use; created through urbanization processes; has led to a loss of the riparian zone and its native vegetation; and has disrupted the lateral connectivity of the rivers. The degradation of the already essentially black rivers is exacerbated by poor longitudinal connectivity (index of connectivity is 2.08–16.56; caused by reservoirs and sluices. For river habitat rehabilitation to be successful; land use patterns need to be changed and reservoirs and sluices will have to be regulated.

  19. Assessment of River Habitat Quality in the Hai River Basin, Northern China.

    Science.gov (United States)

    Ding, Yuekui; Shan, Baoqing; Zhao, Yu

    2015-09-01

    We applied a river habitat quality (RHQ) assessment method to the Hai River Basin (HRB); an important economic centre in China; to obtain baseline information for water quality improvement; river rehabilitation; and watershed management. The results of the assessment showed that the river habitat in the HRB is seriously degraded. Specifically; 42.41% of the sites; accounting for a river length of 3.31 × 10⁴ km; were designated poor and bad. Habitat in the plain areas is seriously deteriorated; and nearly 50% of the sites; accounting for a river length of 1.65 × 10⁴ km; had either poor or bad habitats. River habitat degradation was attributable to the limited width of the riparian zone (≤5 m); lower coverage of riparian vegetation (≤40%); artificial land use patterns (public and industrial land); frequent occurrence of farming on the river banks and high volumes of solid waste (nearly 10 m³); single flow channels; and rare aquatic plants (≤1 category). At the regional scale; intensive artificial land use types caused by urbanization had a significant impact on the RHQ in the HRB. RHQ was significantly and negatively correlated with farmland (r = 1.000; p land (r = 0.998; p land use; created through urbanization processes; has led to a loss of the riparian zone and its native vegetation; and has disrupted the lateral connectivity of the rivers. The degradation of the already essentially black rivers is exacerbated by poor longitudinal connectivity (index of connectivity is 2.08-16.56); caused by reservoirs and sluices. For river habitat rehabilitation to be successful; land use patterns need to be changed and reservoirs and sluices will have to be regulated. PMID:26393628

  20. Community structure of age-0 fishes in paired mainstem and created shallow-water habitats in the Lower Missouri River

    Science.gov (United States)

    Starks, T. A.; Long, James M.; Dzialowski, Andrew R.

    2016-01-01

    Anthropogenic alterations to aquatic ecosystems have greatly reduced and homogenized riverine habitat, especially those used by larval and juvenile fishes. Creation of shallow-water habitats is used as a restoration technique in response to altered conditions in several studies globally, but only recently in the USA. In the summer of 2012, the U.S. Army Corps of Engineers sampled larval and juvenile fishes at six paired sites (mainstem and constructed chute shallow-water habitats) along a section of the Missouri River between Rulo, NE and St. Louis, MO, USA. From those samples, we enumerated and identified a total of 7622 fishes representing 12 families. Community responses of fishes to created shallow-water habitats were assessed by comparisons of species richness and diversity measures between paired sites and among sampling events. Shannon entropy measures were transformed, and gamma diversity (total diversity) was partitioned into two components, alpha (within community) and beta (between community) diversity using a multiplicative decomposition method. Mantel test results suggest site location, time of sampling event and habitat type were drivers of larval and juvenile community structure. Paired t-test results indicated little to no differences in beta diversity between habitat types; however, chute habitats had significantly higher alpha and gamma diversity as well as increased abundances of Asian carp larvae when compared with mainstem shallow-water habitat. Our results not only show the importance of created shallow-water habitat in promoting stream fish diversity but also highlight the role space and time may play in future restoration and management efforts. 

  1. John Day River Subbasin Fish Habitat Enhancement Project, 2002-2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Powell, Russ M.; Delano, Kenneth H.

    2004-04-01

    Work undertaken in 2003 included: (1) Seven new fence projects were completed thereby protecting 7.6 miles of stream (2) Completion of 0.7 miles of dredge tail leveling on Granite Creek. (3) Maintenance of all active project fences (66.14 miles), watergaps (66), spring developments (33) and plantings were checked and repairs performed. (4) Since the initiation of the Fish Habitat Project in 1984 we have 72.94 miles of stream protected using 131.1 miles of fence. With the addition of the Restoration and Enhancement Projects we have 205.96 miles of fence protecting 130.3 miles of stream.

  2. Fish Passage Center; Columbia Basin Fish and Wildlife Authority, 2003 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    DeHart, Michele (Columbia Basin Fish and Wildlife Authority, Fish Passage Center, Portland, OR)

    2004-09-01

    a benefit for steelhead. Survivals for spring fish in the Lower Granite to McNary Dam and the McNary to Bonneville Dam reach were similar to recent years. Returning numbers of adult spring and summer chinook, coho and steelhead were less than observed in 2002, but far exceeded the ten-year average return numbers. Sockeye numbers were less than both the 2002 returning adults and the ten-year average number. However, fall chinook numbers surpassed all previous counts at Bonneville Dam since 1938. In 2003, about 81 million juvenile salmon were released from Federal, State, tribal or private hatcheries into the Columbia River Basin above Bonneville Dam. This was slightly less than the number released last year, but about average for the past several years.

  3. Fish Passage Center; Columbia Basin Fish and Wildlife Authority, 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    DeHart, Michele; Berggren, Thomas J.; Filardo, Margaret (Columbia Basin Fish and Wildlife Authority, Fish Passage Center, Portland, OR)

    2003-09-01

    The runoff volumes in 2002 were near average for the January to July period above Lower Granite Dam (80%) and The Dalles Dam (97%). The year 2002 hydrosystem operations and runoff conditions resulted in flows that were less than the seasonal Biological Opinion (Opinion) flow objectives at Lower Granite Dam for both the spring and summer period. The seasonal flow objectives for Priest Rapids and McNary dams were exceeded for the spring period, but at McNary Dam summer flow objectives were not met. While seasonal flow objectives were exceeded for the spring at McNary Dam, the 2002 season illustrated that Biological Opinion management to seasonal flow targets can result in conditions where a major portion of the juvenile fish migration migrates in conditions that are less than the flow objectives. The delay in runoff due to cool weather conditions and the inability of reservoirs to augment flows by drafting lower than the flood control elevations, resulted in flows less than the Opinion objectives until May 22, 2002. By this time approximately 73% of the yearling chinook and 56% of steelhead had already passed the project. For the most part, spill in 2002 was managed below the gas waiver limits for total dissolved gas levels and the NMFS action criteria for dissolved gas signs were not exceeded. The exception was at Lower Monumental Dam where no Biological Opinion spill occurred due to the need to conduct repairs in the stilling basin. Survival estimates obtained for PIT tagged juveniles were similar in range to those observed prior to 2001. A multi-year analysis of juvenile survival and the factors that affect it was conducted in 2002. A water transit time and flow relation was demonstrated for spring migrating chinook and steelhead of Snake River and Mid Columbia River origin. Returning numbers of adults observed at Bonneville Dam declined for spring chinook, steelhead and coho, while summer and fall chinook numbers increased. However, all numbers were far greater

  4. Columbia Basin Fish and Wildlife Authority Project Abstracts; May 25-27, Portland, Oregon, 1997 Annual Review.

    Energy Technology Data Exchange (ETDEWEB)

    Allee, Brian J. (Columbia Basin Fish and Wildlife Authority, Portland, OR)

    1997-06-26

    Abstracts are presented from the 1997 Columbia Basin Fish and Wildlife Program Review of Projects. The purpose was to provide information and education on the approximate 127 million dollars in Northwest electric ratepayer fish and wildlife mitigation projects funded annually.

  5. Population size structure of non-native fishes along longitudinal gradients in a highly regulated Mediterranean basin.

    Directory of Open Access Journals (Sweden)

    Fátima Amat-Trigo

    2015-10-01

    Documented changes in fish size metrics at population levels can demonstrate trends in non-native fishes at basin scale, however, the collinearity with spatial gradients and the species-specific response could make it a difficult undertaking.

  6. Effects of extreme habitat conditions on otolith morphology: a case study on extremophile live bearing fishes (Poecilia mexicana, P. sulphuraria).

    Science.gov (United States)

    Schulz-Mirbach, Tanja; Riesch, Rüdiger; García de León, Francisco J; Plath, Martin

    2011-12-01

    Our study was designed to evaluate if, and to what extent, restrictive environmental conditions affect otolith morphology. As a model, we chose two extremophile livebearing fishes: (i) Poecilia mexicana, a widespread species in various Mexican freshwater habitats, with locally adapted populations thriving in habitats characterized by the presence of one (or both) of the natural stressors hydrogen sulphide and darkness, and (ii) the closely related Poecilia sulphuraria living in a highly sulphidic habitat (Baños del Azufre). All three otolith types (lapilli, sagittae, and asterisci) of P. mexicana showed a decrease in size ranging from the non-sulphidic cave habitat (Cueva Luna Azufre), to non-sulphidic surface habitats, to the sulphidic cave (Cueva del Azufre), to sulphidic surface habitats (El Azufre), to P. sulphuraria. Although we found a distinct differentiation between ecotypes with respect to their otolith morphology, no clear-cut pattern of trait evolution along the two ecological gradients was discernible. Otoliths from extremophiles captured in the wild revealed only slight similarities to aberrant otoliths found in captive-bred fish. We therefore hypothesize that extremophile fishes have developed coping mechanisms enabling them to avoid aberrant otolith growth - an otherwise common phenomenon in fishes reared under stressful conditions.

  7. Cold-water coral mounds and sponge-beds as habitats for demersal fish on the Norwegian shelf

    Science.gov (United States)

    Kutti, Tina; Bergstad, Odd Aksel; Fosså, Jan Helge; Helle, Kristin

    2014-01-01

    The importance of cold-water coral (CWC) mounds and sponge-beds as habitat for demersal fish was examined in the Træna Deep marine protected area and adjacent areas of the Norwegian continental shelf. Standardised longline fishing was conducted twice, in June and March, and predetermined fishing effort was allocated to multiple plots with varying densities of small CWC mounds and sponges, plus control plots with neither of these habitats. Catches within all examined habitats were dominated by the commercially exploited Brosme brosme (representing >70% of the total catch) followed by Galeus melastomus, Chimaera monstrosa, Etmopterus spinax and the commercially exploited Molva molva. Positive correlations were found between catch rates of B. brosme, G. melastomus and C. monstrosa and the density of small CWC mounds at one or both sampling occasions. No correlations were found between the catch rates of the same three species and sponge density; thus the sponge-beds did not seem to represent an ecologically equivalent habitat to the CWCs. On a local scale the CWC habitat appeared to attract higher abundances of B. brosme, G. melastomus and C. monstrosa; however, the differences in catch rates between coral and non-coral areas were quite low (2-4 times) and for most species the fish-habitat relationships varied temporarily and with the spatial scale used to delineate the habitat. Based on the methods and the results of this study and the fact that CWCs only occupy a very small proportion of the Norwegian shelf, the importance of CWCs as habitat for the populations of the demersal fish species examined is judged as marginal.

  8. The role of oil and gas production platforms in providing habitat for fish populations of the northern Gulf of Mexico

    Energy Technology Data Exchange (ETDEWEB)

    Wilson, C.A. [Louisiana State Univ., Baton Rouge, LA (United States). Dept. of Oceanography and Coastal Sciences and the Coastal Fisheries Inst.; Stanley, D. [Stantec Ltd., Brampton, ON (Canada); Miller, M.W. [Louisiana State Univ., Baton Rouge, LA (United States). Coastal Fisheries Inst., School of the Coast and Environment

    2003-07-01

    A study was conducted to determine the impact that the nearly 4,500 oil and gas platforms in the northern Gulf of Mexico may have on fish habitat. For the past decade, fish populations associated with the platforms have been examined using hydro acoustics and a remotely operated vehicle. Since 1992, more than 85 sampling excursions were conducted at 4 to 8 platforms, at water depths ranging from 22 to 300 m. Results indicate that the platforms serve as a very effective fish habitat. It was noted that along the north-south transect, fish assemblages shift from coastal-dominated fishes at shallower sites to more tropical marine-dominated assemblage at the deeper sites. Pelagic species were most abundant at water depths greater than 100 m. Most fishes at the deep sites existed only in the upper 70 m of the water column, but on the continental shelf, the fishes were abundant throughout the water column, with the highest densities being near the Mississippi River. Fish densities, which ranged from 0 to 3 fish per cubic metre, were influenced by factors such as season, water depth, and platform side. It was estimated that 10 to 30,000 fish lived around each of the platforms examined. The study showed that offshore oil and gas activity in the northern Gulf of Mexico has positively affected the distribution and abundance of many substrate-dependent species, red snapper in particular.

  9. Klamath Basin: A Watershed Approach to Support Habitat Restoration, Species Recovery, and Water Resource Planning

    Science.gov (United States)

    Shipley, Frank

    2007-01-01

    Water allocation among human and natural resource uses in the American West is challenging. Western rivers have been largely managed for hydropower, irrigation, drinking water, and navigation. Today land and water use practices have gained importance, particularly as aging dams are faced with re-licensing requirements and provisions of the Endangered Species and Clean Water Acts. Rising demand for scarce water heightens the need for scientific research to predict consequences of management actions on habitats, human resource use, and fish and wildlife. Climate change, introduction of invasive species, or restoration of fish passage can have large, landscape-scaled consequences - research must expand to encompass the appropriate scale and by applying multiple scientific disciplines to complex ecosystem challenges improve the adaptive management framework for decision-making.

  10. John Day River Subbasin Fish Habitat Enhancement Project, 2005-2006 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Powell, Russ M.; Alley, Pamela D.; Delano, Kenneth H. (Oregon Department of Fish and Wildlife, John Day, OR)

    2006-03-01

    Work undertaken in 2005 included: (1) Four new fence projects were completed thereby protecting 7.55 miles of stream with 9.1 miles of new riparian fence (2) Fence removal 1.7 miles of barbed wire. (3) Completed three spring developments (repair work on two BLM springs on Cottonwood Creek (Dayville), 1 solar on Rock Creek/ Collins property). (4) Dredge tail leveling completed on 0.9 miles of the Middle Fork of the John Day River (5) Cut, hauled and placed 30 junipers on Indian Creek/Kuhl property for bank stability. (6) Collected and planted 1500 willow cuttings on Mountain Creek/Jones property. (7) Conducted steelhead redd counts on Lake Cr./Hoover property and Cottonwood Cr./Mascall properties (8) Seeded 200 lbs of native grass seed on projects where the sites were disturbed by fence construction activities. (9) Maintenance of all active project fences (72.74 miles), watergaps (60), spring developments (30) were checked and repairs performed. (10) Since the initiation of the Fish Habitat Program in 1984 we have installed 156.06 miles of riparian fence on leased property protecting 88.34 miles of anadromous fish bearing stream. With the addition of the Restoration and Enhancement Projects from 1996-2001, where the landowner received the materials, built and maintained the project we have a total of 230.92 miles of fence protecting 144.7 miles of stream and 3285 acres of riparian habitat.

  11. Assessment of Present Anadromous Fish Production Facilities in the Columbia River Basin, US Fish and Wildlife Hatcheries, Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Delarm, Michael R.; Smith, Robert Z.

    1990-07-01

    The goal of this report is to document current production practices for hatcheries which rear anadromous fish in the Columbia River Basin and to identify those facilities where production can be increased. A total of 85 hatchery and satellite facilities operated by the Idaho Department of Fish and Game, Oregon Department of Fish and Game, US Fish and Wildlife Service, Washington Department of Wildlife, and Washington Department of Fisheries were evaluated. The years 1985 to 1987 were used in this evaluation. During those years, releases averaged 143,306,596 smolts weighing 7,693,589 pounds. A total of 48 hatchery or satellite facilities were identified as having expansion capability. They were estimated to have the potential for increasing production by an 84,448,000 smolts weighing 4,853,306 pounds. 2 refs., 25 tabs.

  12. Quantifying Florida Bay Habitat Suitability for Fishes and Invertebrates Under Climate Change Scenarios

    Science.gov (United States)

    Kearney, Kelly A.; Butler, Mark; Glazer, Robert; Kelble, Christopher R.; Serafy, Joseph E.; Stabenau, Erik

    2015-04-01

    The Florida Bay ecosystem supports a number of economically important ecosystem services, including several recreational fisheries, which may be affected by changing salinity and temperature due to climate change. In this paper, we use a combination of physical models and habitat suitability index models to quantify the effects of potential climate change scenarios on a variety of juvenile fish and lobster species in Florida Bay. The climate scenarios include alterations in sea level, evaporation and precipitation rates, coastal runoff, and water temperature. We find that the changes in habitat suitability vary in both magnitude and direction across the scenarios and species, but are on average small. Only one of the seven species we investigate ( Lagodon rhomboides, i.e., pinfish) sees a sizable decrease in optimal habitat under any of the scenarios. This suggests that the estuarine fauna of Florida Bay may not be as vulnerable to climate change as other components of the ecosystem, such as those in the marine/terrestrial ecotone. However, these models are relatively simplistic, looking only at single species effects of physical drivers without considering the many interspecific interactions that may play a key role in the adjustment of the ecosystem as a whole. More complex models that capture the mechanistic links between physics and biology, as well as the complex dynamics of the estuarine food web, may be necessary to further understand the potential effects of climate change on the Florida Bay ecosystem.

  13. Assessing predation risks for small fish in a large river ecosystem between contrasting habitats and turbidity conditions

    Science.gov (United States)

    Dodrill, Michael J.; Yard, Mike; Pine, William E.

    2016-01-01

    This study examined predation risk for juvenile native fish between two riverine shoreline habitats, backwater and debris fan, across three discrete turbidity levels (low, intermediate, high) to understand environmental risks associated with habitat use in a section of the Colorado River in Grand Canyon, AZ. Inferences are particularly important to juvenile native fish, including the federally endangered humpback chub Gila cypha. This species uses a variety of habitats including backwaters which are often considered important rearing areas. Densities of two likely predators, adult rainbow trout Oncorhynchus mykiss and adult humpback chub, were estimated between habitats using binomial mixture models to examine whether higher predator density was associated with patterns of predation risk. Tethering experiments were used to quantify relative predation risk between habitats and turbidity conditions. Under low and intermediate turbidity conditions, debris fan habitat showed higher relative predation risk compared to backwaters. In both habitats the highest predation risk was observed during intermediate turbidity conditions. Density of likely predators did not significantly differ between these habitats. This information can help managers in Grand Canyon weigh flow policy options designed to increase backwater availability or extant turbidity conditions.

  14. Methodologies for Assessing the Cumulative Environmental Effects of Hydroelectric Development of Fish and Wildlife in the Columbia River Basin, Volume 1, Recommendations, 1987 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Stull, Elizabeth Ann

    1987-07-01

    This volume is the first of a two-part set addressing methods for assessing the cumulative effects of hydropower development on fish and wildlife in the Columbia River Basin. Species and habitats potentially affected by cumulative impacts are identified for the basin, and the most significant effects of hydropower development are presented. Then, current methods for measuring and assessing single-project effects are reviewed, followed by a review of methodologies with potential for use in assessing the cumulative effects associated with multiple projects. Finally, two new approaches for cumulative effects assessment are discussed in detail. Overall, this report identifies and reviews the concepts, factors, and methods necessary for understanding and conducting a cumulative effects assessment in the Columbia River Basin. Volume 2 will present a detailed procedural handbook for performing a cumulative assessment using the integrated tabular methodology introduced in this volume. 308 refs., 18 figs., 10 tabs.

  15. Habitat type and nursery function for coastal marine fish species, with emphasis on the Eastern Cape region, South Africa

    Science.gov (United States)

    Whitfield, Alan K.; Pattrick, Paula

    2015-07-01

    A considerable amount of research has been undertaken to document and assess the nursery function of a variety of coastal habitats for marine fish species around the world. Most of these studies have focused on particular habitats and have generally been confined to a limited range of fish species associated with specific nursery areas. In this review we conduct a general assessment of the state of knowledge of coastal habitats in fulfilling the nursery-role concept for marine fishes, with particular emphasis on biotic and abiotic factors that influence nursery value. A primary aim was to synthesize information that can be used to drive sound conservation planning and provide a conceptual framework so that new marine protected areas (MPAs) incorporate the full range of nursery areas that are present within the coastal zone. We also use published data from a coastal section in the Eastern Cape Province, South Africa, to highlight the differential use of shallow aquatic habitats by a range of juvenile marine fish species within this region. Although the Eastern Cape case study does not assess the relative growth, food availability or predation in nursery and non-nursery areas within the coastal zone, it does document which habitats are important to the juveniles of dominant marine species within each area. These habitats, which range from intertidal pools, subtidal gulleys and surf zones to estuaries, do appear to perform a key role in the biological success of species assemblages, with the juveniles of particular marine fishes tending to favour specific nursery areas. According to a multivariate analysis of nursery habitat use within this region, marine species using estuaries tend to differ considerably from those using nearshore coastal waters, with a similar pattern likely to occur elsewhere in the world.

  16. Habitat preferences and life history of the red scorpion fish, Scorpaena notata, in the Mediterranean

    Science.gov (United States)

    Ordines, F.; Quetglas, A.; Massutí, E.; Moranta, J.

    2009-12-01

    Scorpaena notata is a small, sedentary scorpaenid species widely distributed in the Mediterranean and adjacent waters of the Atlantic. In the western Mediterranean it inhabits coastal continental shelf bottoms. In the Balearic Islands, these bottoms are characterised by the presence of the facies with red algae, including both Peyssonnelia and mäerl beds. These beds enhance the structural complexity, biodiversity and secondary production of the soft bottoms. Due to the oceanographic conditions of the Islands, the facies with red algae are especially rich in terms of biomass and algal coverage, and are widespread distributed between 40 and 90 m depth, where trawlers exploiting the continental shelf operate. The present work studies the biology of S. notata and its relationship with habitat characteristics. Special attention is focused on the aspects related to fish condition and growth as a tool to assess the importance of the facies with red algae for fish. The reproduction period of S. notata in the Balearic Islands occurs in summer and is accompanied by a decrease in hepatic condition, as it happens in the adjacent area off the Iberian Peninsula; however, in contrast with this adjacent area, this period is accompanied by a decrease in somatic condition and an increase in feeding potential, which suggests that these could be adaptations to the higher oligotrophy of the Archipelago. The standardised algal biomass (mostly Rhodophyceae) present in the bottoms positively affected the abundance, somatic condition and feeding potential of S. notata. Individuals inhabiting bottoms with the highest algal biomass showed faster growth than the entire population analysed together. Both, the structural complexity and the availability of preys in the facies with red algae are revealed as advantageous traits for the life history of fish. Taking into account the importance of individual health for the overall success of the population, the indexes studied here could be a useful

  17. Pollution, habitat loss, fishing, and climate change as critical threats to penguins.

    Science.gov (United States)

    Trathan, Phil N; García-Borboroglu, Pablo; Boersma, Dee; Bost, Charles-André; Crawford, Robert J M; Crossin, Glenn T; Cuthbert, Richard J; Dann, Peter; Davis, Lloyd Spencer; De La Puente, Santiago; Ellenberg, Ursula; Lynch, Heather J; Mattern, Thomas; Pütz, Klemens; Seddon, Philip J; Trivelpiece, Wayne; Wienecke, Barbara

    2015-02-01

    Cumulative human impacts across the world's oceans are considerable. We therefore examined a single model taxonomic group, the penguins (Spheniscidae), to explore how marine species and communities might be at risk of decline or extinction in the southern hemisphere. We sought to determine the most important threats to penguins and to suggest means to mitigate these threats. Our review has relevance to other taxonomic groups in the southern hemisphere and in northern latitudes, where human impacts are greater. Our review was based on an expert assessment and literature review of all 18 penguin species; 49 scientists contributed to the process. For each penguin species, we considered their range and distribution, population trends, and main anthropogenic threats over the past approximately 250 years. These threats were harvesting adults for oil, skin, and feathers and as bait for crab and rock lobster fisheries; harvesting of eggs; terrestrial habitat degradation; marine pollution; fisheries bycatch and resource competition; environmental variability and climate change; and toxic algal poisoning and disease. Habitat loss, pollution, and fishing, all factors humans can readily mitigate, remain the primary threats for penguin species. Their future resilience to further climate change impacts will almost certainly depend on addressing current threats to existing habitat degradation on land and at sea. We suggest protection of breeding habitat, linked to the designation of appropriately scaled marine reserves, including in the High Seas, will be critical for the future conservation of penguins. However, large-scale conservation zones are not always practical or politically feasible and other ecosystem-based management methods that include spatial zoning, bycatch mitigation, and robust harvest control must be developed to maintain marine biodiversity and ensure that ecosystem functioning is maintained across a variety of scales.

  18. Intertidal organism, habitat, fish survey, fishing duration, and other data from the Outer Kenai Peninsula from the HUMDINGER as part of Outer Continental Shelf Environmental Assessment Program (OCSEAP) from 30 July 1975 to 31 August 1976 (NODC Accession 7700542)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Intertidal organism, habitat, fish survey, fishing duration, and other data were collected from the Outer Kenai Peninsula from the HUMDINGER as part of Outer...

  19. River restoration and habitat improvements in the sub-arctic river Bognelva – effects on anadromous fish

    OpenAIRE

    Bråthen Schedel, Joachim

    2011-01-01

    Alterations of watercourses in the form of channelization, dam building and digging of dikes has been ongoing for centuries. This has eliminated much of the vital natural variation found in rivers that is necessary for optimal fish habitat, and thus, a major cause of declines of the fish population in many watercourses. In recent times, these effects have been recognized and efforts to restore these altered rivers have been initiated. I examined the river Bognelva located in northern Norway t...

  20. Heavy metals in fish from streams near F-Area and H-Area seepage basins

    Energy Technology Data Exchange (ETDEWEB)

    Loehle, C.; Paller, M.

    1990-11-01

    This report summarizes results of recent analyses of heavy metals in fish from Savannah River Site (SRS) streams near the F-Area and H-Area seepage basins. Fish were collected from headwater areas of Four Mile Creek and Pen Branch, from just below the H-Area seepage basin, and from three sites downstream in Four Mile Creek. These fish were analyzed for RCRA trace metals using standard EPA methods. Silver, arsenic, beryllium, cadmium, copper, nickel, lead, antimony, and thallium were all either undetectable or had only a few detectable values. Mercury values were all well below the regulatory limit of 1 {mu}g/g. For the total group of fish analyzed, there were no differences among sampling site for aluminum, chromium, or zinc. Selenium concentrations differed among sites, with fish collected near the H-Area and two control sites having the highest concentrations. When selenium concentrations were compared across sunfishes only, the seepage basin site was shown to be slightly elevated. Among species, yellowfin shiners had higher aluminum and zinc concentrations than sunfishes and bottom fish. 24 refs.

  1. Fish Passage Center; Columbia Basin Fish and Wildlife Authority, 2004 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    DeHart, Michele (Columbia Basin Fish and Wildlife Authority, Portland, OR)

    2005-07-01

    The runoff volume for 2004 was below average throughout the Columbia Basin. At The Dalles the January-July runoff volume was 77% of average or 83.0 MAF. Grand Coulee, Hungry Horse, and Libby were below their Biological Opinion reservoir target elevations on April 10 at the beginning of the spring salmon migration season. All major storage reservoirs except Libby, Grand Coulee, Hungry Horse, Dworshak, and Brownlee were within a few feet of full by the end of June and early July. Overall, NOAA Biological Opinion seasonal flow targets were not met at any project for either spring or summer migrations of salmon and steelhead. Overall, spill was reduced in 2004. Implementation of Biological Opinion spill for fish passage measures was wrought with contention in 2004, particularly for summer spill which was finally the subject of litigation. The spring migration spill season began with debate among the fishery mangers and tribes and action agencies regarding spill at Bonneville Dam for the Spring Creek Hatchery release. The USFWS agreed to a spill test versus a corner collector operation to determine the best route for survival for these fish. The USFWS agreement includes no spill for early Spring Creek Hatchery releases for the next two years. Spring spill at Snake River transportation sites was eliminated after April 23, and transportation was maximized. The federal operators and regulators proposed to reduce Biological Opinion summer spill measures, while testing the impact of those reductions. This proposal was eventually rejected in challenges in the Federal Ninth Circuit Court. The Corps of Engineers reported that spill at Bonneville Dam in the 2002 to 2004 period was actually lower than reported due to a spill calibration error at the project. Because flows were low and spill levels were easily controlled few fish were observed with any signs of Gas Bubble Trauma. The annual Smolt Monitoring Program was implemented and provided in-season timing and passage

  2. Influences of local habitat, tributary position, and dam characteristics on fish assemblages within impoundments of low-head dams in the tributaries of the Qingyi River, China.

    Science.gov (United States)

    Li, Xian; Li, Yu-Ru; Chu, Ling; Zhu, Ren; Wang, Li-Zhu; Yan, Yun-Zhi

    2016-03-18

    Low-head dam impoundments modify local habitat and alter fish assemblages; however, to our knowledge, the pattern of how fish assemblages in the impoundments relate to local habitat, tributary position, and dam characteristics is still unclear. We used data collected in 62 impoundments created by low-head dams in headwater streams of the Qingyi River, China, to examine relationships between fish assemblages and local habitat, tributary position, and dam characteristics. We also assessed the relative importance of the three groups of factors in determining fish species richness and composition. Linear regression models showed that fish species richness was related to substrate heterogeneity, confluence link, and dam number upstream. Redundancy analysis showed that fish species compositions were influenced by substrate heterogeneity, confluence link, dam height, dam numbers upstream and downstream. Overall, dam characteristics were more important in affecting fish species richness but less important in determining fish species composition than local habitat (i.e., substrate heterogeneity) and tributary position. Our results suggest that low-head dam may affect fish species richness in impoundments by modifying local habitat and constraining fish movement, and the relative abundances of those fish species may depend more on species habitat presences and stream size than on impoundment size and number.

  3. Influences of local habitat, tributary position, and dam characteristics on fish assemblages within impoundments of low-head dams in the tributaries of the Qingyi River, China.

    Science.gov (United States)

    Li, Xian; Li, Yu-Ru; Chu, Ling; Zhu, Ren; Wang, Li-Zhu; Yan, Yun-Zhi

    2016-03-18

    Low-head dam impoundments modify local habitat and alter fish assemblages; however, to our knowledge, the pattern of how fish assemblages in the impoundments relate to local habitat, tributary position, and dam characteristics is still unclear. We used data collected in 62 impoundments created by low-head dams in headwater streams of the Qingyi River, China, to examine relationships between fish assemblages and local habitat, tributary position, and dam characteristics. We also assessed the relative importance of the three groups of factors in determining fish species richness and composition. Linear regression models showed that fish species richness was related to substrate heterogeneity, confluence link, and dam number upstream. Redundancy analysis showed that fish species compositions were influenced by substrate heterogeneity, confluence link, dam height, dam numbers upstream and downstream. Overall, dam characteristics were more important in affecting fish species richness but less important in determining fish species composition than local habitat (i.e., substrate heterogeneity) and tributary position. Our results suggest that low-head dam may affect fish species richness in impoundments by modifying local habitat and constraining fish movement, and the relative abundances of those fish species may depend more on species habitat presences and stream size than on impoundment size and number. PMID:27029863

  4. Modelling native fish richness to evaluate the effects of hydromorphological changes and river restoration (Júcar River Basin, Spain).

    Science.gov (United States)

    Olaya-Marín, Esther Julia; Martínez-Capel, Francisco; Costa, Rui Manuel Soares; Alcaraz-Hernández, Juan Diego

    2012-12-01

    The richness of native fish is considered to be an indicator of aquatic ecosystem health, and improving richness is a key goal in the management of river ecosystems. An artificial neural network (ANN) model based on field data from 90 sample sites distributed throughout the Júcar River Basin District was developed to predict the native fish species richness (NFSR). The Levenberg-Marquardt learning algorithm was used for model training. When constructing the model, we tried different numbers of neurons (hidden layers), compared different transfer functions, and tried different k values (from 3 to 10) in the k-fold cross-validation method. This process and the final selection of key variables with relevant ecological meaning support the reliability and robustness of the final ANN model. The partial derivatives method was applied to determine the relative importance of input environmental variables. The final ANN model combined variables describing riparian quality, water quality, and physical habitat and helped identify the primary drivers of the NFSR patterns in Mediterranean rivers. In the second part of the study, the model was used to evaluate the effectiveness of two restoration actions in the Júcar River: the removal of two abandoned weirs and the progressive increase in the proportion of riffles. The model indicated that the combination of these actions produced a rise in NFSR, which ultimately reached the maximum values observed in the reference site of that river ecotype (sensu the European Water Framework Directive). The results demonstrate the importance of longitudinal connectivity and riffle proportion for improving NFSR and the power of ANNs to help decisions in the management and ecological restoration of Mediterranean rivers. Furthermore, this model at the basin scale is the first step for further research on the effects of water scarcity and global change on Mediterranean fish communities. PMID:23031292

  5. John Day River Subbasin Fish Habitat Enhancement Project, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Powell, Russ M.; Delano, Kenneth H.; Jerome, James P.

    2002-07-01

    Work undertaken in 2001 included: (1) 3335 structure posts were pounded on six new projects thereby protecting 10 miles of stream (2) Completion of 1000 ft. of barbed wire fence and one watergap on the Middle Fork of the John Day River/ Forrest property. (3) Fence removal of 5010 ft. of barbed wire fence on the Meredith project. (4) Maintenance of all active project fences (66 miles), watergaps (76), spring developments (32) and plantings were checked and repairs performed. (5) Since the initiation of the Fish Habitat Project in 1984 we have 63.74 miles of stream protected using 106.78 miles of fence. With the addition of the Restoration and Enhancement Projects we have 180.64 miles of fence protecting 120.6 miles of stream.

  6. Iskuulpa Watershed Management Plan : A Five-Year Plan for Protecting and Enhancing Fish and Wildlife Habitats in the Iskuulpa Watershed.

    Energy Technology Data Exchange (ETDEWEB)

    Confederated Tribes of the Umatilla Indian Reservation Wildlife Program

    2003-01-01

    The Confederated Tribes of the Umatilla Indian Reservation (CTUIR) propose to protect, enhance, and mitigate wildlife and wildlife habitat and watershed resources in the Iskuulpa Watershed. The Iskuulpa Watershed Project was approved as a Columbia River Basin Wildlife Fish and Mitigation Project by the Bonneville Power Administration (BPA) and Northwest Power Planning Council (NWPPC) in 1998. Iskuulpa will contribute towards meeting BPA's obligation to compensate for wildlife habitat losses resulting from the construction of the John Day and McNary Hydroelectric facilities on the Columbia River. By funding the enhancement and operation and maintenance of the Iskuulpa Watershed, BPA will receive credit towards their mitigation debt. The purpose of the Iskuulpa Watershed management plan update is to provide programmatic and site-specific standards and guidelines on how the Iskuulpa Watershed will be managed over the next three years. This plan provides overall guidance on both short and long term activities that will move the area towards the goals, objectives, and desired future conditions for the planning area. The plan will incorporate managed and protected wildlife and wildlife habitat, including operations and maintenance, enhancements, and access and travel management.

  7. Refuge habitats for fishes during seasonal drying in an intermittent stream: Movement, survival and abundance of three minnow species

    Science.gov (United States)

    Hodges, S.W.; Magoulick, D.D.

    2011-01-01

    Drought and summer drying can be important disturbance events in many small streams leading to intermittent or isolated habitats. We examined what habitats act as refuges for fishes during summer drying, hypothesizing that pools would act as refuge habitats. We predicted that during drying fish would show directional movement into pools from riffle habitats, survival rates would be greater in pools than in riffles, and fish abundance would increase in pool habitats. We examined movement, survival and abundance of three minnow species, bigeye shiner (Notropis boops), highland stoneroller (Campostoma spadiceum) and creek chub (Semotilus atromaculatus), during seasonal stream drying in an Ozark stream using a closed robust multi-strata mark-recapture sampling. Population parameters were estimated using plausible models within program MARK, where a priori models are ranked using Akaike's Information Criterion. Creek chub showed directional movement into pools and increased survival and abundance in pools during drying. Highland stonerollers showed strong directional movement into pools and abundance increased in pools during drying, but survival rates were not significantly greater in pools than riffles. Bigeye shiners showed high movement rates during drying, but the movement was non-directional, and survival rates were greater in riffles than pools. Therefore, creek chub supported our hypothesis and pools appear to act as refuge habitats for this species, whereas highland stonerollers partly supported the hypothesis and bigeye shiners did not support the pool refuge hypothesis. Refuge habitats during drying are species dependent. An urgent need exists to further understand refuge habitats in streams given projected changes in climate and continued alteration of hydrological regimes. ?? 2011 Springer Basel AG (outside the USA).

  8. Impact of Alternative Environmental Flow Prescriptions on Hydropower Production and Fish Habitat Suitability

    Science.gov (United States)

    Castellarin, A.; Ceola, S.; Pugliese, A.; Galeati, G. A.

    2015-12-01

    Anthropogenic activities along streams and rivers are increasingly recognized to be a major concern for fluvial ecosystems. The management of water resources, by means of e.g. flow diversions and dams, for industrial, agricultural, water-supply, hydropower production and flood protection purposes induces significant changes to the natural streamflow regime of a river. Indeed, the river flow regime is known to be a major abiotic factor influencing fluvial ecosystems. An established approach aimed at preserving the behaviour and distribution of fluvial species relies on the definition of minimum streamflow requirements (i.e., environmental flows) downstream of dams and diversion structures. Such environmental flows are normally identified through methodologies that have an empirical nature and may not be representative of local ecological and hydraulic conditions. While the effect of imposing a minimum discharge release is easily predictable in terms of e.g. loss of hydropower production, the advantages in terms of species preferences are often poorly understood and seldom assessed. To analyze the interactions between flow releases and the behaviour and distribution of fluvial species (i.e., from periphyton, to benthic invertebrate and fish), one may use a habitat suitability curve, which is a fundamental tool capable of describing species preferences influenced by any generic environmental variable. The outcomes of a real case study applied to several Italian rivers, located in the Marche administrative district in Central Italy (∽10000km2), in which we quantitatively assess the effects of alternative environmental flow scenarios on the existing hydropower network and on two fish species that are quite abundant in the study area (i.e., Leuciscus cephalus cabeda and Barbus barbus plebejus), will be presented and discussed. The proposed analysis, which can be easily adapted to different riparian habitats and hydrological contexts, is a useful tool to guide the

  9. An appraisal of the efficiency of fish marketing system in Lake Chad basin

    OpenAIRE

    Bolorunduro, P.; Sule, O.D.

    2003-01-01

    Fish products from the Chad Basin Lake play important role in meeting fish protein needs of Nigeria: they contribute not less than 25% of the total domestic fish supply and are significant in determining the availability of processed products and reduction of post-harvest losses. Processors, marketers and consumers are the major actors in appraising a marketing system. The results show that most sellers (4-7.5%) are within the age range of 30-39 years. Desires for more earnings led the market...

  10. Plans for Implementing the Columbia River Basin Fish and Wildlife Program in Fiscal Year 1986.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration

    1985-10-01

    The Fish and Wildlife Program is an effort to enhance, protect, and mitigate losses of those fish and wildlife which have been affected by the development, operation, and management of hydroelectric facilities in the Columbia River Basin. The implementation plan is organized to address the action items assigned to BPA in Section 1500 of the Council's Fish and Wildlife Program (1984). These action items generally relate to one or more specific measures in the Program. The following information is listed for each project: budget summary, projects, obligation plan, and work plan and milestones.

  11. Fish species diversity in the Victoria and Kyoga lake basins: their conservation and sustainable use

    OpenAIRE

    2000-01-01

    Introduction of exotic fish species especially the Nile perch Lates niloticus, is believed to be responsible for the decline of fish species diversity in lakes Victoria, Kyoga and Nabugabo.About 60% of the haplochromine cichlids are thought to have become extinct from L. Victoria due to predation by the Nile perch. However there are many lakes satelite to the lakes Victoria and Kyoga basins which still have fish fauna similar to that of the main lakes. many of the satellite lakes are separate...

  12. Juvenile and small resident fishes of Florida Bay, a critical habitat in the Everglades National Park, Florida

    OpenAIRE

    Powell, Allyn B.; Thayer, Gordon; LaCroix, Michael; Cheshire, Robin

    2007-01-01

    This compendium presents information on the life history, diet, and abundance and distribution of 46 of the more abundant juvenile and small resident fish species, and data on three species of seagrasses in Florida Bay, Everglades National Park. Abundance and distribution of fish data were derived from three sampling schemes: (1) an otter trawl in basins (1984–1985, 1994–2001), (2) a surface trawl in basins (1984–1985), and (3) a surface trawl in channels (1984–1985). Results from surfa...

  13. Tolerance of fish to contaminated habitats: underlying mechanisms probed with isotopic tracers

    International Nuclear Information System (INIS)

    Full text: Future scenarios indicate agricultural and industrial expansions in major river basins and enhanced world populations focusing in coastal watersheds, particularly in SE Asia. Such scenarios are consistent with increasing concentrations of various contaminants, including metals and radionuclides. It is important to assess the likely impacts on fisheries, their response and possible adaptability to enhanced contaminant levels and the implications for resulting transfer factors and contaminant levels in fisheries, that can be the major sources of subsistence and livelihood for coastal communities. The likely future responses of fisheries to projected increases in contaminant loadings over broad geographical scales can be probed through the employment of currently highly contaminated aquatic environments. Such a system with these attributes, that we have investigated periodically since the early 1970s, is the Finniss River in tropical northern Australia, that has continued to receive acid mine drainage from the Rum Jungle U/Cu mine since the 1950s. Prior to mine-site remediation in the early 1980's measured loadings of Cu, Zn, Mn and sulfate caused severe impact to fish diversity and abundance, including fish kills observed in the main Finniss River and its East Branch. Following mine-site remediation and measured reductions in contaminant loadings, there has been recovery of fish communities in the main Finniss River and considerable recolonisation of the still highly contaminated region of the East Branch, that was virtually devoid of fish populations prior to remediation. Following mine site remediation reductions in annual-cycle contaminant loads of sulfate, Cu, Zn, and Mn by factors of 3-7 were accompanied by an unexpected degree recovery in fish community structure in the contaminated region of the Finniss River, to the extent that they were not statistically (P > 0.05) distinguishable from unexposed environments. However, these fish communities

  14. Tolerance of fish to contaminated habitats: Underlying mechanisms probed with isotopic tracers

    International Nuclear Information System (INIS)

    Full text: Future scenarios indicate agricultural and industrial expansions in major river basins and enhanced world populations focusing in coastal watersheds, particularly in SE Asia. Such scenarios are consistent with increasing concentrations of various contaminants, including metals and radionuclides. It is important to assess the likely impacts on fisheries, their response and possible adaptability to enhanced contaminant levels and the implications for resulting transfer factors and contaminant levels in fisheries, that can be the major sources of subsistence and livelihood for coastal communities. The likely future responses of fisheries to projected increases in contaminant loadings over broad geographical scales can be probed through the employment of currently highly contaminated aquatic environments. Such a system with these attributes, that we have investigated periodically since the early 1970s, is the Finniss River in tropical northern Australia, that has continued to receive acid mine drainage from the Rum Jungle U/Cu mine since the 1950s. Prior to mine-site remediation in the early 1980's measured loadings of Cu, Zn, Mn and sulfate caused severe impact to fish diversity and abundance, including fish kills observed in the main Finniss River and its East Branch. Following mine-site remediation and measured reductions in contaminant loadings, there has been recovery of fish communities in the main Finniss River and considerable recolonisation of the still highly contaminated region of the East Branch, that was virtually devoid of fish populations prior to remediation. Following mine site remediation reductions in annual-cycle contaminant loads of sulfate, Cu, Zn, and Mn by factors of 3-7 were accompanied by an unexpected deg.ree recovery in fish community structure in the contaminated region of the Finniss River, to the extent that they were not statistically (P > 0.05) distinguishable from unexposed environments. However, these fish communities

  15. Correlations between benthic habitats and demersal fish assemblages — A case study on the Dogger Bank (North Sea)

    Science.gov (United States)

    Sell, Anne F.; Kröncke, Ingrid

    2013-07-01

    The interdependence between groundfish assemblages and habitat properties was investigated on the Dogger Bank in the North Sea. Abiotic habitat parameters considered included topography, hydrographic conditions, sediment composition, and the biotic habitat variable the prevailing benthic invertebrates. Distinct epi- and infauna communities occurred at different locations on the Dogger Bank. Fish assemblages were clearly linked to both the biotic and abiotic habitat characteristics. Overall, fish and benthic communities revealed similar spatial distribution, represented in the respective clusters of characteristic and abundant species. Distribution patterns corresponded with the prevailing abiotic conditions such as depth and sediment composition, which appear to relate to autecological preferences of individual species. The apparently most generalist species, grey gurnard (Eutrigla gurnardus) and dab (Limanda limanda) occurred at all stations and dominated in terms of biomass in most cases. The absolute numbers of grey gurnards were related to the abundance of suitable prey, invertebrate and fish species, which stomach analyses revealed as part of the diet in an independent study during the same research cruise. Haddock (Melanogrammus aeglefinus) and whiting (Merlangius merlangus) were only abundant at deep stations along the flanks of the bank. The occurrence of lemon sole (Microstomus kitt), American plaice (Hippoglossoides platessoides) and cod (Gadus morhua) was also positively correlated with depth, whereas especially lesser weever (Echiichthys vipera), sandeel species and solenette (Buglossidium luteum) occurred predominantly at the shallower sites. At the same time, individual fish species such as solenette and lesser weever were associated with high densities of selected epi- or infauna species.

  16. On the actinopterygian fish fauna (Upper Cretaceous: Campanian) from the Kristianstad Basin, southern Sweden.

    OpenAIRE

    Bazzi, Mohamad

    2014-01-01

    Actinopterygian remains have been recovered from Upper Cretaceous (uppermost lower to lowermost upper Campanian) marine strata of the Kristianstad Basin, southern Sweden. This is the first record of Upper Cretaceous bony fish from the Fennoscandian shield. The fauna consists of higher taxa including Pachycormiformes (Pachycormidae), Elopiformes (Pachyrhizodontidae), Pycnodontiformes (Pycnodontidae), Aulopiformes (Enchodontidae), Ichthyodectiformes (Ichthyodectidae), and indeterminable teleost...

  17. Patterns of habitat segregation among large fishes in a Venezuelan floodplain river

    Directory of Open Access Journals (Sweden)

    Craig A. Layman

    2005-03-01

    Full Text Available Distribution and abundance of large fishes (SL>100 mm in the río Cinaruco, a floodplain river in the Venezuelan llanos, were examined by gill net sampling in four habitat types: sand banks, backwater creeks, floodplain lagoons, and river channel. Sampling was standardized using nets (25 m x 2 m of three mesh sizes set for 24-h periods. Based on data from >10,000 hours of gill netting over three years, there were significant differences in assemblage composition among the four habitats. Pair-wise comparisons suggested differences in assemblage composition between all pairs of habitats except creeks and lagoons. Differences in assemblage composition likely arose from species-specific habitat affinities. For example, 21 taxa were collected from both creeks and lagoons, but not from sand banks or the main river channel; each of these 21 taxa were associated with particular features characteristic of creeks and lagoons (e.g. abundant detritus. Assemblage structure also could be influenced by predation or other biological interactions, but mechanistic experiments are needed to evaluate this hypothesis. Assemblage composition was highly variable within all habitat types, likely the result of spatial and temporal heterogeneity associated with seasonal hydrology. Long distance migrations by prochilodontids and other taxa contributed to higher CPUE during the rising-water period of May 2002. Data from this study will provide a baseline to assess changes in the abundance and distribution of large-bodied fishes in response to increasing impacts from illegal commercial fishing in this region.A distribuição e abundância de grandes peixes (SL>100 mm no rio Cinaruco, um rio com uma planície inundação nos llanos da Venezuela, foram examinadas através de amostragens por redes de espera em quatro habitats: bancos de areia, riachos, lagoas da planície de inundação e o canal do rio. As amostragens foram padronizadas usando-se redes de espera (25 m x 2 m

  18. Quality of coastal and estuarine essential fish habitats: estimations based on the size of juvenile common sole ( Solea solea L.)

    Science.gov (United States)

    Le Pape, O.; Holley, J.; Guérault, D.; Désaunay, Y.

    2003-12-01

    Survival and growth of early fish stages are maximal in coastal and estuarine habitats where natural shallow areas serve as nurseries for a variety of widely distributed species on the continental shelf. Processes occurring in these nursery grounds during the juvenile stage affect growth and may be important in regulating the year-class strength of fishes and population size. The need, therefore, exists to protect these essential fish habitats hence to develop indicators to estimate their quality. The purpose of the present study was to use the growth of juvenile sole as a means of comparing the quality of coastal and estuarine nursery habitats in the Bay of Biscay (France). These sole nurseries were clearly identified from studies based on trawl surveys carried out during the last two decades. The size of 1-group juveniles at the end of their second summer, as estimated from these surveys, is an indicator of growth in these habitats during the juvenile phase and can be used to compare habitat quality. A model taking into account the role of seawater temperature in spatial and interannual variations of juvenile size was developed to compare growth performance in the different nursery sectors. This study shows that the size of juvenile sole after two summers of life is not density-dependent, probably because the size of the population adapts to habitat capacity after high mortality during early-juvenile stages. Size is on one hand positively related to temperature and on the other hand higher in estuarine than in non-estuarine habitats. This high growth potential of juvenile fish in estuarine areas confirms the very important role played by estuaries as nursery grounds and the essential ecological interest of these limited areas in spite of their low water quality. If a general conclusion on habitat quality is to be reached about studies based on the growth of juvenile fish, it is necessary to use not only an integrative indicator of growth, like size

  19. Fish Passage Center; Columbia Basin Fish and Wildlife Authority, 2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    DeHart, Michele (Columbia Basin Fish and Wildlife Authority, Fish Passage Center, Portland, OR)

    2002-07-01

    Extremely poor water conditions within the Columbia River Basin along with extraordinary power market conditions created an exceptionally poor migration year for juvenile salmon and steelhead. Monthly 2001 precipitation at the Columbia above Grand Coulee, the Snake River above Ice Harbor, and the Columbia River above The Dalles was approximately 70% of average. As a result the 2001 January-July runoff volume at The Dalles was the second lowest in Columbia River recorded history. As a compounding factor to the near record low flows in 2001, California energy deregulation and the resulting volatile power market created a financial crisis for the Bonneville Power Administration (BPA). Power emergencies were first declared in the summer and winter of 2000 for brief periods of time. In February of 2001, and on April 3, the BPA declared a ''power emergency'' and suspended many of the Endangered Species Act (ESA) and Biological Opinion (Opinion) measures that addressed mainstem Columbia and Snake Rivers juvenile fish passage. The river and reservoir system was operated primarily for power generation. Power generation requirements in January through March coincidentally provided emergence and rearing flows for the Ives-Pierce Islands spawning area below Bonneville Dam. In particular, flow and spill measures to protect juvenile downstream migrant salmon and steelhead were nearly totally suspended. Spring and summer flows were below the Opinion migration target at all sites. Maximum smolt transportation was implemented instead of the Opinion in-river juvenile passage measures. On May 16, the BPA Administrator decided to implement a limited spill for fish passage at Bonneville and The Dalles dams. On May 25, a limited spill program was added at McNary and John Day dams. Spill extended to July 15. Juvenile migrants, which passed McNary Dam after May 21, experienced a noticeable, improved survival, as a benefit of spill at John Day Dam. The suspension of

  20. Herpetofauna of the cedar glades and associated habitats of the Inner Central Basin of middle Tennessee

    Science.gov (United States)

    Niemiller, M.L.; Graham, Reynolds R.; Glorioso, B.M.; Spiess, J.; Miller, B.T.

    2011-01-01

    The cedar glades and barrens of the Inner Central Basin (ICB) of middle Tennessee support a unique and diverse flora and fauna and represent some of the state's most valued natural areas. We conducted herpetofaunal inventories of the cedar glades, associated barrens, cedar-hardwood forest, and adjacent aquatic habitats of the Stones River drainage of Middle Tennessee, focusing our sampling effort primarily at seven state- or federally owned properties in Rutherford and Wilson counties. These properties included Stones River National Battlefield (SRNB), Flat Rock State Natural Area (FRSNA), Vesta Cedar Glade State Natural Area (VSNA), Fall Creek Recreation Area (FCRA) on J. Percy Priest Wildlife Management Area, Cedars of Lebanon State Forest (CLSF), Cedars of Lebanon State Forest Natural Area (CLSNA), and Cedars of Lebanon State Park (CLSP). We used a variety of inventory techniques in terrestrial, aquatic, and subterranean habitats to survey these properties periodically from 1989 to 2010. We documented 49 species (22 amphibian and 27 reptile) accounting for 75.4% of the 65 herpetofaunal species thought to occur in the ICB, including records for Cemophora coccinea, Aneides aeneus, Gyrinophilus palleucus, Ambystoma barbouri, and Pseudotriton montanus. We found differences in alpha and beta diversity between sites, with the CLSF complex containing a high of 41 herpetofaunal species and FRSNA containing a low of 23 species. Beta diversity comparisons indicated similarity in amphibian species composition between FRSNA and CLSF and between SRNB and CLSF (9 shared species), and in reptile species composition between VSNA and the CLSF complex (16 shared species). We compare the results of our inventory with two previous studies conducted in the area and discuss the relative abundance, conservation, and threats to the herpetofaunal community of these habitats.

  1. Structure-forming corals and sponges and their use as fish habitat in Bering Sea submarine canyons.

    Directory of Open Access Journals (Sweden)

    Robert J Miller

    Full Text Available Continental margins are dynamic, heterogeneous settings that can include canyons, seamounts, and banks. Two of the largest canyons in the world, Zhemchug and Pribilof, cut into the edge of the continental shelf in the southeastern Bering Sea. Here currents and upwelling interact to produce a highly productive area, termed the Green Belt, that supports an abundance of fishes and squids as well as birds and marine mammals. We show that in some areas the floor of these canyons harbors high densities of gorgonian and pennatulacean corals and sponges, likely due to enhanced surface productivity, benthic currents and seafloor topography. Rockfishes, including the commercially important Pacific ocean perch, Sebastes alutus, were associated with corals and sponges as well as with isolated boulders. Sculpins, poachers and pleuronectid flounders were also associated with corals in Pribilof Canyon, where corals were most abundant. Fishes likely use corals and sponges as sources of vertical relief, which may harbor prey as well as provide shelter from predators. Boulders may be equivalent habitat in this regard, but are sparse in the canyons, strongly suggesting that biogenic structure is important fish habitat. Evidence of disturbance to the benthos from fishing activities was observed in these remote canyons. Bottom trawling and other benthic fishing gear has been shown to damage corals and sponges that may be very slow to recover from such disturbance. Regulation of these destructive practices is key to conservation of benthic habitats in these canyons and the ecosystem services they provide.

  2. Structure-forming corals and sponges and their use as fish habitat in Bering Sea submarine canyons.

    Science.gov (United States)

    Miller, Robert J; Hocevar, John; Stone, Robert P; Fedorov, Dmitry V

    2012-01-01

    Continental margins are dynamic, heterogeneous settings that can include canyons, seamounts, and banks. Two of the largest canyons in the world, Zhemchug and Pribilof, cut into the edge of the continental shelf in the southeastern Bering Sea. Here currents and upwelling interact to produce a highly productive area, termed the Green Belt, that supports an abundance of fishes and squids as well as birds and marine mammals. We show that in some areas the floor of these canyons harbors high densities of gorgonian and pennatulacean corals and sponges, likely due to enhanced surface productivity, benthic currents and seafloor topography. Rockfishes, including the commercially important Pacific ocean perch, Sebastes alutus, were associated with corals and sponges as well as with isolated boulders. Sculpins, poachers and pleuronectid flounders were also associated with corals in Pribilof Canyon, where corals were most abundant. Fishes likely use corals and sponges as sources of vertical relief, which may harbor prey as well as provide shelter from predators. Boulders may be equivalent habitat in this regard, but are sparse in the canyons, strongly suggesting that biogenic structure is important fish habitat. Evidence of disturbance to the benthos from fishing activities was observed in these remote canyons. Bottom trawling and other benthic fishing gear has been shown to damage corals and sponges that may be very slow to recover from such disturbance. Regulation of these destructive practices is key to conservation of benthic habitats in these canyons and the ecosystem services they provide. PMID:22470486

  3. Columbia River Basin Fish and Wildlife Program Work Plan for Fiscal Year 1988.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration; Northwest Power Planning Council (U.S.); Columbia Basin Fish and Wildlife Authority

    1987-10-01

    The FY 1988 Columbia River Basin Fish and Wildlife Program Work Plan (Work Plan) presents Bonneville Power Administration's plans for implementing the Columbia River Basin Fish and Wildlife Program (Program) in FY 1988. The Work Plan focuses on individual Action Items found in the amended Program for which Bonneville Power Administration (BPA) has determined it has authority and responsibility to implement. The FY 1988 Work Plan emphasizes continuation of 95 ongoing projects, most of which involve protection, mitigation, or enhancement of anadromous fishery resources. These continuing activities are summarized briefly by Program area: (1) mainstem passage; (2) artificial propagation; (3) natural propagation; (4) resident fish and wildlife; and (5) planning activities.

  4. Taxonomic distinctness and richness of helminth parasite assemblages of freshwater fishes in Mexican hydrological basins.

    Directory of Open Access Journals (Sweden)

    Benjamín Quiroz-Martínez

    Full Text Available In this paper, we analyse the distributional patterns of adult helminth parasites of freshwater fishes with respect to the main hydrological basins of Mexico. We use the taxonomic distinctness and the variation in taxonomic distinctness to explore patterns of parasite diversity and how these patterns change between zoogeographical regions. We address questions about the factors that determine the variation of observed diversity of helminths between basins. We also investigate patterns of richness, taxonomic distinctness and distance decay of similarity amongst basins. Our analyses suggest that the evolution of the fauna of helminth parasites in Mexico is mostly dominated by independent host colonization events and that intra--host speciation could be a minor factor explaining the origin of this diversity. This paper points out a clear separation between the helminth faunas of northern--nearctic and southern--neotropical components in Mexican continental waters, suggesting the availability of two distinct taxonomic pools of parasites in Mexican drainage basins. Data identifies Mexican drainage basins as unities inhabited by freshwater fishes, hosting a mixture of neotropical and nearctic species, in addition, data confirms neotropical and neartic basins/helminth faunas. The neotropical basins of Mexico are host to a richest and more diversified helminth fauna, including more families, genera and species, compared to the less rich and less diverse helminth fauna in the nearctic basins. The present analysis confirms distance--decay as one of the important factors contributing to the patterns of diversity observed. The hypothesis that helminth diversity could be explained by the ichthyological diversity of the basin received no support from present analysis.

  5. Monitoring habitat restoration projects: U.S. Fish and Wildlife Service Pacific Region Partners for Fish and Wildlife Program and Coastal Program Protocol

    Science.gov (United States)

    Woodward, Andrea; Hollar, Kathy

    2011-01-01

    The U.S. Fish and Wildlife Service's (FWS) Pacific Region (Region 1) includes more than 158 million acres (almost 247,000 square miles) of land base in Idaho, Oregon, Washington, Hawai`i, the Commonwealth of the Northern Mariana Islands, American Samoa, Guam, the Republic of Palau, the Federated States of Micronesia, and the Republic of the Marshall Islands. Region 1 is ecologically diverse with landscapes that range from coral reefs, broadleaf tropical forests, and tropical savannahs in the Pacific Islands, to glacial streams and lakes, lush old-growth rainforests, inland fjords, and coastal shoreline in the Pacific Northwest, to the forested mountains, shrub-steppe desert, and native grasslands in the Inland Northwest. Similarly, the people of the different landscapes perceive, value, and manage their natural resources in ways unique to their respective regions and cultures. The Partners for Fish and Wildlife Program (Partners Program) and Coastal Program work with a variety of partners in Region 1 including individual landowners, watershed councils, land trusts, Soil and Water Conservation Districts, non-governmental organizations, Tribal governments, Native Hawaiian organizations, and local, State, and Federal agencies. The Partners Program is the FWS's vanguard for working with private landowners to voluntarily restore and conserve fish and wildlife habitat. Using non-regulatory incentives, the Partners Program engages willing partners to conserve and protect valuable fish and wildlife habitat on their property and in their communities. This is accomplished by providing the funding support and technical and planning tools needed to make on-the-ground conservation affordable, feasible, and effective. The primary goals of the Pacific Region Partners Program are to: Promote citizen and community-based stewardship efforts for fish and wildlife conservation Contribute to the recovery of at-risk species, Protect the environmental integrity of the National Wildlife

  6. Pleistocene fish otoliths from the Mediterranean Basin: a synthesis

    OpenAIRE

    Girone, A.; Nolf, D.; Cappetta, H

    2006-01-01

    An overview of upper pPliocene and Pleistocene otolith assemblages is compiled on the basis of both literature data and newly collected material from several sections located mainly in southern Italy. One hundred and five taxa are listed. Additional comments are provided for taxa subject to discussion. The composition and affinities of the Mediterranean Pleistocene otolith associations (consisting mainly of deep sea fishes) is checked against the available data for Pre-Messinian, Pliocene, an...

  7. Effects of a nuclear power plant thermal discharge on habitat complexity and fish community structure in Ilha Grande Bay, Brazil.

    Science.gov (United States)

    Teixeira, Tatiana Pires; Neves, Leonardo Mitrano; Araújo, Francisco Gerson

    2009-10-01

    Fish communities and habitat structures were evaluated by underwater visual censuses a rocky location impacted by thermal discharge (I) and at two control locations, one in a Sargassum bed (C1) and the other in a rocky shore with higher structural complexity (C2). Habitat indicators and fish communities exhibited significant differences between the impacted and control locations, with the impacted one showing a significant decrease in fish species richness and diversity, as well as a decrease in benthic cover. At the I location, only 13 fish species were described, and the average water temperature was 32+/-0.4 degrees C, compared with 44 species at C1 (25.9+/-0.3 degrees C) and 33 species at C2 (24.6+/-0.2 degrees C). Significant differences in fish communities among locations were found by ANOSIM with Eucinostomus argenteus, Mugil sp. and Haemulon steindachneri typical of location I, while Abudefduf saxatilis, Stegastes fuscus and Malacoctenus delalandi were typical of the control locations. Our study shows that thermal pollution alters benthic cover and influences fish assemblages by altering composition and decreasing richness. PMID:19573906

  8. Washington Phase II Fish Diversion Screen Evaluations in the Yakima River Basin, 2002 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Carter, J.; McMichael, G.; Chamness, M. (Pacific Northwest National Laboratory)

    2003-01-01

    In 2002, the Pacific Northwest National Laboratory evaluated 23 Phase II fish screen sites in the Yakima River Basin as part of a multi-year project for the Bonneville Power Administration on the effectiveness of fish screening devices. Pacific Northwest National Laboratory collected data to determine whether velocities in front of the screens and in the bypasses met National Marine Fisheries Service criteria to promote safe and timely fish passage and whether bypass outfall conditions allowed fish to safely return to the river. In addition, Pacific Northwest National Laboratory conducted underwater video surveys to evaluate the environmental and operational conditions of the screen sites with respect to fish passage. Based on evaluations in 2002, PNNL concluded that: (1) In general, water velocity conditions at the screen sites met fish passage criteria set by the National Marine Fisheries Service. (2) Conditions at most facilities would be expected to provide for safe juvenile fish passage. (3) Conditions at some facilities indicate that operation and/or maintenance should be modified to increase safe juvenile fish passage. (4) Automated cleaning brushes generally functioned properly; chains and other moving parts were typically well greased and operative. (5) Removal of sediment buildup and accumulated leafy and woody debris should be improved at some sites.

  9. Trailing edges projected to move faster than leading edges for large pelagic fish habitats under climate change

    Science.gov (United States)

    Robinson, L. M.; Hobday, A. J.; Possingham, H. P.; Richardson, A. J.

    2015-03-01

    There is mounting evidence to suggest that many species are shifting their ranges in concordance with the climate velocity of their preferred environmental conditions/habitat. While accelerated rates in species' range shifts have been noted in areas of intense warming, due to climate change, few studies have considered the influence that both spatial temperature gradients and rates of warming (i.e., the two components of climate velocity) could have on rates of movement in species habitats. We compared projected shifts in the core habitat of nine large pelagic fish species (five tuna, two billfish and two shark species) off the east coast of Australia at different spatial points (centre, leading and trailing edges of the core habitat), during different seasons (summer and winter), in the near-(2030) and long-term (2070), using independent species distribution models and habitat suitability models. Model projections incorporated depth integrated temperature data from 11 climate models with a focus on the IPCC SRES A2 general emission scenario. Projections showed a number of consistent patterns: southern (poleward) shifts in all species' core habitats; trailing edges shifted faster than leading edges; shifts were faster by 2070 than 2030; and there was little difference in shifts among species and between seasons. Averaging across all species and climate models, rates of habitat shifts for 2030 were 45-60 km decade-1 at the trailing edge, 40-45 km decade-1 at the centre, and 20-30 km decade-1 at the leading edge. Habitat shifts for 2070 were 60-70 km decade-1 at the trailing edge, 50-55 km decade-1 at the centre, and 30-40 km decade-1 at the leading edge. It is often assumed that the leading edge of a species range will shift faster than the trailing edge, but there are few projections or observations in large pelagic fish to validate this assumption. We found that projected shifts at the trailing edge were greater than at the centre and leading of core habitats in

  10. Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan for fiscal year 1992

    International Nuclear Information System (INIS)

    The Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan (AIWP) for Fiscal Year (FY) 1992 presents Bonneville Power Administration's (BPA) plans for implementing the Columbia River Basin Fish and Wildlife Program (Program) in FY 1992. The AIWP focuses on individual Action Items found in the 1987 Program for which BPA has determined that it has authority and responsibility to implement. Each of the entries in the AIWP includes objectives, background, progress to date in achieving the objectives, and a summary of plans for implementation in FY 1992. Most Action Items are implemented through one or more BPA-funded projects. Each Action Item entry is followed by a list of completed, ongoing, and planned projects, along with objectives, results, schedules, and milestones for each project. In October 1988, BPA and the Columbia Basin Fish and Wildlife Authority (CBFWA) initiated a collaborative and cooperative Implementation Planning Process (IPP). The IPP provided opportunities in FY 1991 for the fish and wildlife agencies. Tribes, and other interested parties to be involved in planning FY 1992 Program implementation. This planing process contributed to the development of this year's AIWP. The joint BPA/CBFWA IPP is expected to continue in FY 1992. The FY 1992 AIWP emphasizes continuation of 143 ongoing, or projected ongoing Program projects, tasks, or task orders, most of which involve protection, mitigation, or enhancement of anadromous fishery resources. The FY 1992 AIWP also contains 10 new Program projects or tasks that are planned to start in FY 1992

  11. Habitats as surrogates of taxonomic and functional fish assemblages in coral reef ecosystems: a critical analysis of factors driving effectiveness.

    Directory of Open Access Journals (Sweden)

    Simon Van Wynsberge

    Full Text Available Species check-lists are helpful to establish Marine Protected Areas (MPAs and protect local richness, endemicity, rarity, and biodiversity in general. However, such exhaustive taxonomic lists (i.e., true surrogate of biodiversity require extensive and expensive censuses, and the use of estimator surrogates (e.g., habitats is an appealing alternative. In truth, surrogate effectiveness appears from the literature highly variable both in marine and terrestrial ecosystems, making it difficult to provide practical recommendations for managers. Here, we evaluate how the biodiversity reference data set and its inherent bias can influence effectiveness. Specifically, we defined habitats by geomorphology, rugosity, and benthic cover and architecture criteria, and mapped them with satellite images for a New-Caledonian site. Fish taxonomic and functional lists were elaborated from Underwater Visual Censuses, stratified according to geomorphology and exposure. We then tested if MPA networks designed to maximize habitat richness, diversity and rarity could also effectively maximize fish richness, diversity, and rarity. Effectiveness appeared highly sensitive to the fish census design itself, in relation to the type of habitat map used and the scale of analysis. Spatial distribution of habitats (estimator surrogate's distribution, quantity and location of fish census stations (target surrogate's sampling, and random processes in the MPA design all affected effectiveness to the point that one small change in the data set could lead to opposite conclusions. We suggest that previous conclusions on surrogacy effectiveness, either positive or negative, marine or terrestrial, should be considered with caution, except in instances where very dense data sets were used without pseudo-replication. Although this does not rule out the validity of using surrogates of species lists for conservation planning, the critical joint examination of both target and estimator

  12. Relative importance of habitat and fishing in influencing reef fish communities across seventeen Pacific Island Countries and Territories

    OpenAIRE

    Pinca, S.; Kronen, M.; Magron, F.; McArdle, B; Vigliola, Laurent; Kulbicki, Michel; Andréfouët, Serge

    2012-01-01

    Reef fish assessments were undertaken in 17 Pacific islands to describe the status of finfish resources in 63 villages where fishing is mainly artisanal. Surveys were performed by recording the number and size of edible fish species and benthic composition. Fishing impact was described through six proxies representing level of catch, alternative incomes, degree of commercial catch and country economic development derived from a simultaneous socioeconomic assessment. The relative importance of...

  13. Fish farming characterization of space in Basin River Cuiabá/MT

    Directory of Open Access Journals (Sweden)

    Neli Assunção Silva

    2008-12-01

    Full Text Available The present study aimed to know the spatial distribution of the fish culture, size, water sheet area, cultivated species and the estimated production of fish culture business, defined into Cuiabá river basin. The fish farming secondary data were provided by the Environment State Secretary and systematizated in terms of the spatial distribution using techniques like geoprocessing. Data showed that from 490 registered fish culture, 26.1% didn’t say the geographical coordinates. About 74.3% of the fish culture defined into are micro business, 16.6% are little size, 3.9% are medium size, 0.8% are big size and 4,4% didn’t say the area in the in the register. The basin represents 1,395 ha of water sheet area, with estimated production of 9,128.87 ton year-1. Várzea Grande has the major water sheet area (60.4%, followed by Cuiabá (12.7%, and Nossa Senhora do Livramento (10%, totalizing more than 83%, compared to other cities into the basin. Piaractus mesopotamicus is the favorite specie for the cultive (36.7% as first category, followed by other species like Colossoma macropomum (female + Piaractus mesopotamicus (male, 20.9%; Brycon microleps, second category (10%; tambaqui (allochthonous specie and other categories (12.3%. Pseudoplatystoma corruscans represents 2.5% and Salminus maxillosus, 0.4%. The other species, with 5.6% and 5.2% (NI, didn’t reported. Várzea Grande has the higher percentage in the estimative of fish production, with 53.9%, followed by Cuiabá, with 20.1%.

  14. Identifying and Evaluating Options for Improving Sediment Management and Fish Passage at Hydropower Dams in the Lower Mekong River Basin

    Science.gov (United States)

    Wild, T. B.; Reed, P. M.; Loucks, D. P.

    2015-12-01

    The Mekong River basin in Southeast Asia is undergoing intensive and pervasive hydropower development to satisfy demand for increased energy and income to support its growing population of 60 million people. Just 20 years ago this river flowed freely. Today some 30 large dams exist in the basin, and over 100 more are being planned for construction. These dams will alter the river's natural water, sediment and nutrient flows, thereby impacting river morphology and ecosystems, and will fragment fish migration pathways. In doing so, they will degrade one of the world's most valuable and productive freshwater fish habitats. For those dams that have not yet been constructed, there still exist opportunities to modify their siting, design and operation (SDO) to potentially achieve a more balanced set of tradeoffs among hydropower production, sediment/nutrient passage and fish passage. We introduce examples of such alternative SDO opportunities for Sambor Dam in Cambodia, planned to be constructed on the main stem of the Mekong River. To evaluate the performance of such alternatives, we developed a Python-based simulation tool called PySedSim. PySedSim is a daily time step mass balance model that identifies the relative tradeoffs among hydropower production, and flow and sediment regime alteration, associated with reservoir sediment management techniques such as flushing, sluicing, bypassing, density current venting and dredging. To date, there has been a very limited acknowledgement or evaluation of the significant uncertainties that impact the evaluation of SDO alternatives. This research is formalizing a model diagnostic assessment of the key assumptions and parametric uncertainties that strongly influence PySedSim SDO evaluations. Using stochastic hydrology and sediment load data, our diagnostic assessment evaluates and compares several Sambor Dam alternatives using several performance measures related to energy production, sediment trapping and regime alteration, and

  15. Radionuclide concentrations in bed sediment and fish tissue within the Rio Grande drainage basin

    Energy Technology Data Exchange (ETDEWEB)

    Booher, J.L.; Fresquez, P.R.; Carter, L.F.; Gallaher, B.M.; Mullen, M.A.

    1998-02-01

    In 1992-93, Los Alamos National Laboratory collaborated with the U.S. Geological Survey in an effort to characterize radionuclide concentrations in bed sediment and fish tissue within the Rio Grande drainage basin from Colorado to Texas. Bed sediment was sampled from 18 locations for cesium ({sup 137}Cs), tritium ({sup 3}H), strontium ({sup 90}Sr), plutonium ({sup 238}Pu and {sup 239}Pu), americium ({sup 241}Am), total uranium ({sup tot}U) and alpha, beta, and gamma activity. Fish tissue was sampled from 12 locations for {sup 137}Cs, {sup 90}Sr, {sup 238}Pu, {sup 239}Pu and {sup tot}U.

  16. Radionuclide concentrations in bed sediment and fish tissue within the Rio Grande drainage basin

    International Nuclear Information System (INIS)

    In 1992-93, Los Alamos National Laboratory collaborated with the U.S. Geological Survey in an effort to characterize radionuclide concentrations in bed sediment and fish tissue within the Rio Grande drainage basin from Colorado to Texas. Bed sediment was sampled from 18 locations for cesium (137Cs), tritium (3H), strontium (90Sr), plutonium (238Pu and 239Pu), americium (241Am), total uranium (totU) and alpha, beta, and gamma activity. Fish tissue was sampled from 12 locations for 137Cs, 90Sr, 238Pu, 239Pu and totU

  17. Bioaccumulation of methylmercury in fish tissue from the Roosevelt River, Southwestern Amazon basin

    Directory of Open Access Journals (Sweden)

    Marcelo Rodrigues dos Anjos

    2016-06-01

    Full Text Available Mercury is a major pollutant in the Amazon River system, and its levels in fish and human hair are usually above the limit recommended by health agencies. The objective of this study was to analyze the methylmercury (MeHg concentration in fish tissue from the Roosevelt River. The river's water velocity, depth, pH, temperature, electrical conductivity, dissolved oxygen and substrate type were measured, and fifty specimens distributed in 14 fish species were collected. A total of 64.3% of the sampled species were of the order Characiform and 71.4% of the species were carnivores. Fifty percent of the species had MeHg concentrations above threshold limit (Hg-T 0.5 mg kg-1 established for food by the World Health Organization. Cichla monoculus had the highest value of MeHg (2.45 mg kg-1. The MeHg concentration in fish varied according to dietary habits. The study also found bioaccumulation of MeHg in fish tissue in the following descending order: carnivorous > detritivorous > frugivore. Low significant correlations were found between fish weight or length and MeHg. Further studies on MeHg contamination are recommended in tissues of fish consumed in human riverine communities in the Roosevelt River Basin.

  18. Sublethal salinity stress contributes to habitat limitation in an endangered estuarine fish.

    Science.gov (United States)

    Komoroske, Lisa M; Jeffries, Ken M; Connon, Richard E; Dexter, Jason; Hasenbein, Matthias; Verhille, Christine; Fangue, Nann A

    2016-09-01

    As global change alters multiple environmental conditions, predicting species' responses can be challenging without understanding how each environmental factor influences organismal performance. Approaches quantifying mechanistic relationships can greatly complement correlative field data, strengthening our abilities to forecast global change impacts. Substantial salinity increases are projected in the San Francisco Estuary, California, due to anthropogenic water diversion and climatic changes, where the critically endangered delta smelt (Hypomesus transpacificus) largely occurs in a low-salinity zone (LSZ), despite their ability to tolerate a much broader salinity range. In this study, we combined molecular and organismal measures to quantify the physiological mechanisms and sublethal responses involved in coping with salinity changes. Delta smelt utilize a suite of conserved molecular mechanisms to rapidly adjust their osmoregulatory physiology in response to salinity changes in estuarine environments. However, these responses can be energetically expensive, and delta smelt body condition was reduced at high salinities. Thus, acclimating to salinities outside the LSZ could impose energetic costs that constrain delta smelt's ability to exploit these habitats. By integrating data across biological levels, we provide key insight into the mechanistic relationships contributing to phenotypic plasticity and distribution limitations and advance the understanding of the molecular osmoregulatory responses in nonmodel estuarine fishes. PMID:27606005

  19. Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan for Fiscal Year 1993.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration; Northwest Power Planning Council (U.S.); Columbia Basin Fish and Wildlife Authority

    1992-09-01

    The Columbia River Basin Fish and Wildlife Program (Program) was developed by the Northwest Power Planning Council (Council) in accordance with Public Law 96-501, the Pacific Northwest Electric Power Planning and Conservation Act (Act). The purpose of the Program is to guide the Bonneville Power Administration (BPA) and other Federal agencies in carrying out their responsibilities to protect, mitigate, and enhance fish and wildlife of the Columbia River Basin. The Annual Implementation World Plan (AIWP) presents BPA`s plans for implementing the Program during fiscal year (FY) 1993. The FY 1993 AIWP emphasizes continuation of 143 ongoing or projecting ongoing Program projects, tasks, or task orders, most of which involve protection, mitigation, or enhancement of anadromous fishery resources. The FY 1993 AIWP also contains three new Program projects or tasks that are planned to start in FY 1993.

  20. Effects of flood control alternatives on fish and wildlife resources of the Malheur-Harney lakes basin

    Science.gov (United States)

    Hamilton, David B.; Auble, Gregor T.; Ellison, Richard A.; Roelle, James E.

    1985-01-01

    Malheur Lake is the largest freshwater marsh in the western contiguous United States and is one of the main management units of the Malheur National Wildlife Refuge in southeastern Oregon. The marsh provides excellent waterfowl production habitat as well as vital migration habitats for birds in the Pacific flyway. Water shortages have typically been a problem in this semiarid area; however, record snowfalls and cool summers have recently caused Malheur Lake to rise to its highest level in recorded history. This has resulted in the loss of approximately 57,000 acres of important wildlife habitat as well as extensive flooding of local ranches, roads, and railroad lines. Because of the importance of the Refuge, any water management plan for the Malheur-Harney Lakes Basin needs to consider the impact of management alternatives on the hydrology of Malheur Lake. The facilitated modeling workshop described in this report was conducted January 14-18, 1985, under the joint sponsorship of the Portland Ecological Services Field Office and the Malheur National Wildlife Refuge, Region 1, U.S. Fish and Wildlife Service (FWS). The Portland Field Office is responsible for FWS reporting requirements on Federal water resource projects while the Refuge staff has management responsibility for much of the land affected by high water levels in the Malheur-Harney Lakes Basin. The primary objective of the workshop was to begin gathering and analyzing information concerning potential fish and wildlife impacts, needs, and opportunities associated with proposed U.S. Army Corps of Engineers (COE) flood control alternatives for Malheur Lake. The workshop was structured around the formulation of a computer model that would simulate the hydrologic effects of the various alternatives and any concommitant changes in vegetation communities and wildlife use patterns. The simulation model is composed of three connected submodels. The Hydrology submodel calculates changes in lake volume, elevation

  1. The role of physical habitat and sampling effort on estimates of benthic macroinvertebrate taxonomic richness at basin and site scales.

    Science.gov (United States)

    Silva, Déborah R O; Ligeiro, Raphael; Hughes, Robert M; Callisto, Marcos

    2016-06-01

    Taxonomic richness is one of the most important measures of biological diversity in ecological studies, including those with stream macroinvertebrates. However, it is impractical to measure the true richness of any site directly by sampling. Our objective was to evaluate the effect of sampling effort on estimates of macroinvertebrate family and Ephemeroptera, Plecoptera, and Trichoptera (EPT) genera richness at two scales: basin and stream site. In addition, we tried to determine which environmental factors at the site scale most influenced the amount of sampling effort needed. We sampled 39 sites in the Cerrado biome (neotropical savanna). In each site, we obtained 11 equidistant samples of the benthic assemblage and multiple physical habitat measurements. The observed basin-scale richness achieved a consistent estimation from Chao 1, Jack 1, and Jack 2 richness estimators. However, at the site scale, there was a constant increase in the observed number of taxa with increased number of samples. Models that best explained the slope of site-scale sampling curves (representing the necessity of greater sampling effort) included metrics that describe habitat heterogeneity, habitat structure, anthropogenic disturbance, and water quality, for both macroinvertebrate family and EPT genera richness. Our results demonstrate the importance of considering basin- and site-scale sampling effort in ecological surveys and that taxa accumulation curves and richness estimators are good tools for assessing sampling efficiency. The physical habitat explained a significant amount of the sampling effort needed. Therefore, future studies should explore the possible implications of physical habitat characteristics when developing sampling objectives, study designs, and calculating the needed sampling effort. PMID:27165604

  2. Effects of trap fishing on coral reefs and associated habitats in the Florida Keys

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — We conducted surveys of trap distributions, targeted habitats, trap damage to coral reefs and associated habitats, and spatial/temporal distribution of catches....

  3. Effects of trap fishing on coral reefs and associated habitats in the US Caribbean

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — We are conducting surveys of trap distributions, targeted habitats, trap damage to coral reefs and associated habitats, and spatial/temporal distribution of...

  4. The influence of hydrogeomorphic dynamics on fish habitat: A case study using the ooCAESAR landscape evolution model

    Science.gov (United States)

    Wheaton, J. M.; Sear, D. A.; Darby, S. E.; Booker, D. E.; Acreman, M.

    2005-12-01

    The sediments, morphological features and riverflows that define the hydrogeomorphology of natural river channels provide physical habitat diversity that sustains the aquatic biodiversity of river ecosystems. This simple concept underpins the large number of contemporary ecohydraulic models that are available in the literature. Such models have been widely used to predict how morphological diversity (taken here to encompass channel sediments, topography and flow velocity) influences habitat quality for target species at the reach scale. The accuracy of these predictions is a matter of considerable practical importance, as the results are frequently used as the basis for restoration or rehabilitation. However, such models are limited in that they do not account for dynamic changes in river morphology, which themselves are triggered by changes in the flows of water and sediment delivered from the watershed upstream and stimulated by climatic, tectonic or land cover perturbations across a wide range of temporal scales. Accordingly there is an urgent need to combine the outputs of catchment-based geomorphological models with ecohydraulic models, so that predictions of habitat quality focused on specific reaches can be placed into their appropriate (i.e., the watershed) spatial context. To address these issues we herein present preliminary simulations from a case study of the Sulphur Creek watershed, a 24.2 sq. km., third-order catchment draining one of 47 tributaries to the Napa River, which empties southerly into the San Francisco Bay of northern California. Therein, the influence of catchment-scale geomorphic dynamics on reach-scale fish habitat is investigated using the ooCAESAR landscape evolution model. This cellular automaton model, based on its predecessor CAESAR, was chosen because it can be run at spatial resolutions (1 to 5 m.) that are ecologically meaningful and at temporal resolutions that capture both individual event dynamics and long-term evolutionary

  5. Reconnaissance-level application of physical habitat simulation in the evaluation of physical habitat limits in the Animas Basin, Colorado

    Science.gov (United States)

    Milhous, Robert T.

    2003-01-01

    The Animas River is in southwestern Colorado and flows mostly to the south to join the San Juan River at Farmington, New Mexico (Figure 1). The Upper Animas River watershed is in San Juan County, Colorado and is located in the San Juan Mountains. The lower river is in the Colorado Plateau country. The winters are cold with considerable snowfall and little snowmelt in the mountains in the upper part of the basin. The lower basin has less snow but the winters are still cold. The streamflows during the winter are low and reasonably stable.

  6. A habitat-use model to determine essential fish habitat for juvenile brown shrimp (Farfantepenaeus aztecus) in Galveston Bay, Texas

    OpenAIRE

    Clark, Randall D.; Christensen, John D.; Mark E Monaco; Caldwell, Philip A.; Matthews, Geoffrey A.; Minello , Thomas J.

    2004-01-01

    A density prediction model for juvenile brown shrimp (Farfantepenaeus aztecus) was developed by using three bottom types, five salinity zones, and four seasons to quantify patterns of habitat use in Galveston Bay, Texas. Sixteen years of quantitative density data were used. Bottom types were vegetated marsh edge, submerged aquatic vegetation, and shallow nonvegetated bottom. Multiple regression was used to develop density estimates, and the resultant formula was then coupled with a geographic...

  7. Washington phase II fish diversion screen evaluations in the Yakima River Basin, 1999; TOPICAL

    International Nuclear Information System (INIS)

    Pacific Northwest National Laboratory (PNNL) evaluated 20 Phase II screen sites in the Yakima River Basin as part of a multi-year study for the Bonneville Power Administration (BPA) on the effectiveness of fish screening devices. The sites were examined to determine if they were being effectively operated and maintained to provide fish a safe, efficient return to the Yakima River. Data were collected to determine if velocities in front of the screens and in the bypass met current National Marine Fisheries Service (NMFS) criteria to promote safe and timely fish bypass and whether bypass outfall conditions allowed fish to safely return to the river. In general, water velocity conditions at the screen sites met fish passage criteria set forth by the NMFS. Although velocities often fluctuated from one sampling location to the next, average sweep velocities typically exceeded approach velocities and increased toward the bypass. Mean approach velocities were below the NMFS criteria of and lt; 0.4 feet per second (fps) at most sites (Table 1). Based on our observations in 1999, we believe that most facilities were efficiently protecting juvenile fish from entrainment, impingement, or migration delay. Most screens were properly sealed to prevent fish entrainment and injury, although potential problems were identified at several screen sites. Six sites (one fewer than the seven sites identified in 1998) had loose or damaged seals that might have allowed fish to be entrained (Table 1). Other sites still had spaces larger than 3/32 in. where small fish could possibly pass into the irrigation canal

  8. Washington Phase II Fish Diversion Screen Evaluations in the Yakima River Basin, 1999.

    Energy Technology Data Exchange (ETDEWEB)

    Blanton, S.L.; Neitzel, Duane A.; McMichael, Geoffrey A.

    2000-04-01

    Pacific Northwest National Laboratory (PNNL) evaluated 20 Phase II screen sites in the Yakima River Basin as part of a multi-year study for the Bonneville Power Administration (BPA) on the effectiveness of fish screening devices. The sites were examined to determine if they were being effectively operated and maintained to provide fish a safe, efficient return to the Yakima River. Data were collected to determine if velocities in front of the screens and in the bypass met current National Marine Fisheries Service (NMFS) criteria to promote safe and timely fish bypass and whether bypass outfall conditions allowed fish to safely return to the river. In general, water velocity conditions at the screen sites met fish passage criteria set forth by the NMFS. Although velocities often fluctuated from one sampling location to the next, average sweep velocities typically exceeded approach velocities and increased toward the bypass. Mean approach velocities were below the NMFS criteria of < 0.4 feet per second (fps) at most sites (Table 1). Based on our observations in 1999, we believe that most facilities were efficiently protecting juvenile fish from entrainment, impingement, or migration delay. Most screens were properly sealed to prevent fish entrainment and injury, although potential problems were identified at several screen sites. Six sites (one fewer than the seven sites identified in 1998) had loose or damaged seals that might have allowed fish to be entrained (Table 1). Other sites still had spaces larger than 3/32 in. where small fish could possibly pass into the irrigation canal.

  9. Relative importance of mangroves as feeding habitat for juvenile fish: a comparative study on mangrove habitats with different settings

    NARCIS (Netherlands)

    Lugendo, B.; Nagelkerken, I.; Kruitwagen, G.; Velde, G. van der; Mgaya, Y.D.

    2007-01-01

    The importance of mangroves as feeding grounds for fish and other macrozoob-enthos in the Indian Ocean and elsewhere has been a subject of debate. This could partly be due to the fact that studies describing this role have been conducted in mangrove systems that differed in their settings. By using

  10. Hood River and Pelton Ladder monitoring and evaluation project and Hood River fish habitat project : annual progress report 1999-2000.; ANNUAL

    International Nuclear Information System (INIS)

    The Hood River subbasin is home to four species of anadromous salmonids: chinook salmon (Oncorhynchus tshawytscha), coho salmon (Oncorhynchus kisutch), steelhead (Oncorhynchus mykiss), and sea run cutthroat trout (Salmo clarki). Indigenous spring chinook salmon were extirpated during the late 1960's. The naturally spawning spring chinook salmon currently present in the subbasin are progeny of Deschutes stock. Historically, the Hood River subbasin hatchery steelhead program utilized out-of-basin stocks for many years. Indigenous stocks of summer and winter steelhead were listed in March 1998 by National Marine Fisheries Service (NMFS) under the Endangered Species Act (ESA) as a ''Threatened'' Species along with similar genetically similar steelhead in the Lower Columbia Basin. This annual report summarizes work for two consecutive contract periods: the fiscal year (FY) 1999 contract period was 1 October, 1998 through 30 September, 1999 and 1 October, 1999 through 30 September, 2000 for FY 2000. Work implemented during FY 1999 and FY 2000 included (1) acclimation of hatchery spring chinook salmon and hatchery summer and winter steelhead smolts, (2) spring chinook salmon spawning ground surveys on the West Fork Hood River (3) genetic analysis of steelhead and cutthroat[contractual service with the ODFW], (4) Hood River water temperature studies, (5) Oak Springs Hatchery (OSH) and Round Butte Hatchery (RBH) coded-wire tagging and clipping evaluation, (6) preparation of the Hood River Watershed Assessment (Coccoli et al., December 1999) and the Fish Habitat Protection, Restoration, and Monitoring Plan (Coccoli et al., February 2000), (7) project implementation of early action habitat protection and restoration projects, (8) Pelton Ladder evaluation studies, (9) management oversight and guidance to BPA and ODFW engineering on HRPP facilities, and (10) preparation of an annual report summarizing project objectives for FY 1999 and FY 2000

  11. Hood River and Pelton Ladder Monitoring and Evaluation Project and Hood River Fish Habitat Project : Annual Progress Report 1999-2000.

    Energy Technology Data Exchange (ETDEWEB)

    Lambert, Michael B.; McCanna, Joseph P.; Jennings, Mick

    2001-02-01

    The Hood River subbasin is home to four species of anadromous salmonids: chinook salmon (Oncorhynchus tshawytscha), coho salmon (Oncorhynchus kisutch), steelhead (Oncorhynchus mykiss), and sea run cutthroat trout (Salmo clarki). Indigenous spring chinook salmon were extirpated during the late 1960's. The naturally spawning spring chinook salmon currently present in the subbasin are progeny of Deschutes stock. Historically, the Hood River subbasin hatchery steelhead program utilized out-of-basin stocks for many years. Indigenous stocks of summer and winter steelhead were listed in March 1998 by National Marine Fisheries Service (NMFS) under the Endangered Species Act (ESA) as a ''Threatened'' Species along with similar genetically similar steelhead in the Lower Columbia Basin. This annual report summarizes work for two consecutive contract periods: the fiscal year (FY) 1999 contract period was 1 October, 1998 through 30 September, 1999 and 1 October, 1999 through 30 September, 2000 for FY 2000. Work implemented during FY 1999 and FY 2000 included (1) acclimation of hatchery spring chinook salmon and hatchery summer and winter steelhead smolts, (2) spring chinook salmon spawning ground surveys on the West Fork Hood River (3) genetic analysis of steelhead and cutthroat [contractual service with the ODFW], (4) Hood River water temperature studies, (5) Oak Springs Hatchery (OSH) and Round Butte Hatchery (RBH) coded-wire tagging and clipping evaluation, (6) preparation of the Hood River Watershed Assessment (Coccoli et al., December 1999) and the Fish Habitat Protection, Restoration, and Monitoring Plan (Coccoli et al., February 2000), (7) project implementation of early action habitat protection and restoration projects, (8) Pelton Ladder evaluation studies, (9) management oversight and guidance to BPA and ODFW engineering on HRPP facilities, and (10) preparation of an annual report summarizing project objectives for FY 1999 and FY 2000.

  12. Habitat and Recreational Fishing Opportunity in Tampa Bay: Linking Ecological and Ecosystem Services to Human Beneficiaries

    Science.gov (United States)

    Estimating value of estuarine habitat to human beneficiaries requires that we understand how habitat alteration impacts function through both production and delivery of ecosystem goods and services (EGS). Here we expand on the habitat valuation technique of Bell (1997) with an es...

  13. The fish community of a moderately exposed beach on the southwestern Cape coast of South Africa and an assessment of this habitat as a nursery for juvenile fish

    Science.gov (United States)

    Bennett, B. A.

    1989-03-01

    The ichthyofauna of a moderately exposed surf-zone habitat on the southwestern Cape coast of South Africa was sampled by seine netting monthly for 13 months. Twenty species of fish, 40 306 individuals weighing a total of 211 kg were captured. The number of species and standing crop varied seasonally with higher values occurring during the summer (January-March). The average summer standing stock of 38·6 g m -2 was considerably higher than any previously recorded from a surf-zone habitat and the annual average (10·1 g m -2 was comparable with that in estuaries. Eighteen of the species sampled occurred almost exclusively as juveniles and only two as adults. Four species were present throughout the year, 11 of them seasonally and the remaining five sporadically. Small juveniles (20-35 mm) typically appeared in the surf-zone 2-4 months after they were spawned. These 0+ juveniles remained there for between three months and one year depending on species, before vacating the surf-zone for their adult habitats. A comparison of the abundance of juveniles in the surf-zone with other inshore marine habitats suggested that five species ( Amblyrhynchotes honckenii, Cheilodonichthys capensis, Diplodus sargus, Lithognathus mormyrus and Pomadasys olivaceum) may be entirely, and three species ( Lichia amia, Liza richardsoni and Rhabdosargus globiceps) largely, dependent on the surf-zone as a nursery area. It was concluded that the surf-zone of sandy beaches may be as important as estuaries as a nursery habitat for juvenile fish.

  14. Washington Phase II Fish Diversion Screen Evaluations in the Yakima River Basin, 2000.

    Energy Technology Data Exchange (ETDEWEB)

    Chamness, M. A.

    2001-03-01

    Pacific Northwest National Laboratory (PNNL) evaluated 21 Phase II screen sites in the Yakima River Basin as part of a multi-year study for the Bonneville Power Administration (BPA) on the effectiveness of fish screening devices. The sites were examined in 1997, 1998, 1999, and 2000 to determine if they were being effectively operated and maintained to provide fish a safe, efficient return to the Yakima River. Data were collected to determine if velocities in front of the screens and in the bypass met current National Marine Fisheries Service (NMFS) criteria to promote safe and timely fish bypass and whether bypass outfall conditions allowed fish to safely return to the river. Based on the results of our studies in 2000, we conclude that: in general, water velocity conditions at the screen sites met fish passage criteria set forth by the NMFS; most facilities were efficiently protecting juvenile fish from entrainment, impingement, or migration delay; automated cleaning brushes generally functioned properly; chains and other moving parts were well greased and inoperative; and removal of sediment build-up and accumulated leafy and woody debris are areas that continue to improve.

  15. Extraordinarily thick-boned fish linked to the aridification of the Qaidam Basin (northern Tibetan Plateau).

    Science.gov (United States)

    Chang, Meemann; Wang, Xiaoming; Liu, Huanzhang; Miao, Desui; Zhao, Quanhong; Wu, Guoxuan; Liu, Juan; Li, Qiang; Sun, Zhencheng; Wang, Ning

    2008-09-01

    Scattered with numerous salt lakes and approximately 2,700-3,200 m above sea level, the giant Qaidam inland basin on the northern Tibetan Plateau has experienced continuing aridification since the beginning of the Late Cenozoic as a result of the India-Asia plate collision and associated uplift of the Tibetan Plateau. Previous evidence of aridification comes mainly from evaporite deposits and salinity-tolerant invertebrate fossils. Vertebrate fossils were rare until recent discoveries of abundant fish. Here, we report an unusual cyprinid fish, Hsianwenia wui, gen. et sp. nov., from Pliocene lake deposits of the Qaidam Basin, characterized by an extraordinarily thick skeleton that occupied almost the entire body. Such enormous skeletal thickening, apparently leaving little room for muscles, is unknown among extant fish. However, an almost identical condition occurs in the much smaller cyprinodontid Aphanius crassicaudus (Cyprinodonyiformes), collected from evaporites exposed along the northern margins of the Mediterranean Sea during the Messinian desiccation period. H. wui and A. crassicaudus both occur in similar deposits rich in carbonates (CaCO(3)) and sulfates (CaSO(4)), indicating that both were adapted to the extreme conditions resulting from the aridification in the two areas. The overall skeletal thickening was most likely formed through deposition of the oversaturated calcium and was apparently a normal feature of the biology and growth of these fish. PMID:18757732

  16. TOTAL MERCURY (HgT BIOACCUMULATION AND FISH FOOD HABITS IN NEGRO RIVER BASIN, AMAZON, BRAZIL

    Directory of Open Access Journals (Sweden)

    Jean Louchard Ferreira Soares

    2016-03-01

    Full Text Available In the Amazon, the fish is the main nutritional source for the riverine. Thus, fish have been commonly used in environmental monitoring work to be good biomonitors. This study analyzed the total mercury concentration (THg in fish of different species and feeding habits in order to investigate the existence of bioaccumulation in species in the basin of the Negro river and verify that the THg levels found are in accordance with the stipulated limit for consumption human. Sampling points were distributed in the basin of the Negro river during the period of high water. After the fisheries specimens were identified, measured and weighed. Then muscle samples were taken and subjected to acid digestion and analyzed by Cold Vapor Atomic Fluorescence Spectrophotometer - CVAFS. To research data was used analysis of variance and linear regression. A total of 264 specimens distributed into 10 species were analyzed, and the THg of the concentrations ranged from 0.030 for 1,670 mg.kg-1. The species Hoplias malabaricus, Serrasalmus rhombeus, Hemiodus immaculatus and Cichla temensis showed bioaccumulation. High concentrations of THg were found in carnivorous, piscivorous, planctívos and omnivores fish. No specimen showed mean concentrations of THg in violation to ANVISA, but this occurred in relation to FAO and WHO. keywords: Brazilian Amazon; biomonitoring; high waters; Hg.

  17. Habitat use and foraging success of 0+pike ( Esox lucius L.) in experimental ponds related to prey fish, water transparency and light intensity

    DEFF Research Database (Denmark)

    Skov, Christian; Berg, Søren; Jacobsen, Lene;

    2002-01-01

    This study investigated the habitat use of 0+ pike (9-17 cm.) in relation to two different water transparency regimes (clear water/ chlorophyll water), two different light regimes (day/night) and the 2 presence/absence of prey using 16 in experimental ponds. Pike could freely choose between two...... structured habitats (a simple structured and a complex structured), an interface habitat (between the structured habitats and open water) and an open water habitat. Foraging success of the pike in relation to water transparency was investigated by comparing mean condition (Fultons K of the pike as well as...... the number of surviving prey fish. Habitat use was influenced by the presence/absence of prey and varied between waters with different transparency. The presence of prey intensified the use of structural habitats of 0+ pike in both clear and chlorophyll waters. A preference for complex habitats was...

  18. Monitoring habitat restoration projects: U.S. Fish and Wildlife Service Pacific Region Partners for Fish and Wildlife Program and Coastal Program Protocol

    Science.gov (United States)

    Woodward, Andrea; Hollar, Kathy

    2011-01-01

    The U.S. Fish and Wildlife Service's (FWS) Pacific Region (Region 1) includes more than 158 million acres (almost 247,000 square miles) of land base in Idaho, Oregon, Washington, Hawai`i, the Commonwealth of the Northern Mariana Islands, American Samoa, Guam, the Republic of Palau, the Federated States of Micronesia, and the Republic of the Marshall Islands. Region 1 is ecologically diverse with landscapes that range from coral reefs, broadleaf tropical forests, and tropical savannahs in the Pacific Islands, to glacial streams and lakes, lush old-growth rainforests, inland fjords, and coastal shoreline in the Pacific Northwest, to the forested mountains, shrub-steppe desert, and native grasslands in the Inland Northwest. Similarly, the people of the different landscapes perceive, value, and manage their natural resources in ways unique to their respective regions and cultures. The Partners for Fish and Wildlife Program (Partners Program) and Coastal Program work with a variety of partners in Region 1 including individual landowners, watershed councils, land trusts, Soil and Water Conservation Districts, non-governmental organizations, Tribal governments, Native Hawaiian organizations, and local, State, and Federal agencies. The Partners Program is the FWS's vanguard for working with private landowners to voluntarily restore and conserve fish and wildlife habitat. Using non-regulatory incentives, the Partners Program engages willing partners to conserve and protect valuable fish and wildlife habitat on their property and in their communities. This is accomplished by providing the funding support and technical and planning tools needed to make on-the-ground conservation affordable, feasible, and effective. The primary goals of the Pacific Region Partners Program are to: Promote citizen and community-based stewardship efforts for fish and wildlife conservation Contribute to the recovery of at-risk species, Protect the environmental integrity of the National Wildlife

  19. Threats of habitat and water-quality degradation to mussel diversity in the Meramec River Basin, Missouri, USA

    Science.gov (United States)

    Hinck, Jo Ellen; Ingersoll, Christopher G.; Wang, Ning; Augspurger, Tom; Barnhart, M. Christopher; McMurray, Stephen E.; Roberts, Andrew D.; Schrader, Lynn

    2011-01-01

    The Meramec River Basin in east-central Missouri is an important stronghold for native freshwater mussels (Order: Unionoida) in the United States. Whereas the basin supports more than 40 mussel species, previous studies indicate that the abundance and distribution of most species are declining. Therefore, resource managers have identified the need to prioritize threats to native mussel populations in the basin and to design a mussel monitoring program. The objective of this study was to identify threats of habitat and water-quality degradation to mussel diversity in the basin. Affected habitat parameters considered as the main threats to mussel conservation included excess sedimentation, altered stream geomorphology and flow, effects on riparian vegetation and condition, impoundments, and invasive non-native species. Evaluating water-quality parameters for conserving mussels was a main focus of this study. Mussel toxicity data for chemical contaminants were compared to national water quality criteria (NWQC) and Missouri water quality standards (MWQS). However, NWQC and MWQS have not been developed for many chemical contaminants and some MWQS may not be protective of native mussel populations. Toxicity data indicated that mussels are sensitive to ammonia, copper, temperature, certain pesticides, pharmaceuticals, and personal care products; these compounds were identified as the priority water-quality parameters for mussel conservation in the basin. Measures to conserve mussel diversity in the basin include expanding the species and life stages of mussels and the list of chemical contaminants that have been assessed, establishing a long term mussel monitoring program that measures physical and chemical parameters of high priority, conducting landscape scale modeling to predict mussel distributions, determining sublethal effects of primary contaminants of concern, deriving risk-based guidance values for mussel conservation, and assessing the effects of wastewater

  20. Attractiveness of food and avoidance from contamination as conflicting stimuli to habitat selection by fish.

    Science.gov (United States)

    Araújo, Cristiano V M; Rodríguez, Elizabeth N V; Salvatierra, David; Cedeño-Macias, Luis A; Vera-Vera, Victoria C; Moreira-Santos, Matilde; Ribeiro, Rui

    2016-11-01

    Habitat selection by fish is the outcome of a choice between different stimuli. Typically, the presence of food tends to attract organisms, while contamination triggers an avoidance response to prevent toxic effects. Given that both food and contaminants are not homogeneously distributed in the environment and that food can be available in contaminated zones, a key question has been put forward in the present study: does a higher availability of food in contaminated areas interfere in the avoidance response to contaminants regardless of the contamination level? Tilapia fry (Oreochromis sp.; 2.5-3.0 cm and 0.5-0.8 g) were exposed to two different effluent samples, diluted along a free-choice, non-forced exposure system simulating a contamination gradient. Initially, avoidance to the effluents was checked during a one hour exposure. Afterwards, food was added to the system so that the availability of food increased with the increase in the level of contamination, and the avoidance response to contamination was checked during another hour. Results clearly showed a concentration-dependent avoidance response for both effluents during the first hour (i.e., with no food). However, in presence of the food, the avoidance pattern was altered: organisms were propelled to intermittently move towards contaminated areas where food availability was higher. The incursions were taken regardless of the potential risk linked to the toxic effects. In conclusion, even when the risk of toxicity was imminent, tilapia fry were more intensively stimulated by the attractiveness of the food than by repulsion to the contamination.

  1. Fish species utilization of contrasting sub-habitats distributed along an ocean-to-land environmental gradient in a tropical mangrove and seagrass lagoon

    NARCIS (Netherlands)

    Hylkema, A.; Vogelaar, W.; Meesters, H.W.G.; Nagelkerken, I.; Debrot, A.O.

    2015-01-01

    The importance of mangrove and seagrass lagoonal habitats as nursery areas for many reef-associated fish species is well established in the scientific literature. However, few studies have examined the relative use by nursery species of different sub-habitats within such systems. Here, we investigat

  2. Fish communities and trophic metrics as measures of ecological degradation: a case study in the tributaries of the river Ganga basin, India.

    Science.gov (United States)

    Dubey, Vineet Kumar; Sarkar, Uttam Kumar; Pandey, Ajay; Lakra, Wazir Singh

    2013-09-01

    In India, freshwater aquatic resources are suffering from increasing human population, urbanization and shortage of all kind of natural resources like water. To mitigate this, all the major rivers have been planned for a river-interlinking through an interlinking canal system under a huge scheme; yet, the baseline information on ecological conditions of those tropical rivers and their fish communities is lacking at present. In view of that, the present study was undertaken to assess the ecological condition by comparing the trophic metrics of the fish community, conservation status and water chemistry of the two tropical rivers of the Ganga basin, from October 2007 to November 2009. The analysis of trophic niches of the available fish species indicated dominancy of carnivorous (19 species) in river Ken and omnivorous (23 species) in Betwa. The trophic level score of carnivorous species was recorded similar (33.33%) in both rivers, whereas omnivorous species were mostly found in Betwa (36.51%) than Ken (28.07%). Relatively undisturbed sites of Betwa (B1, B2 and B3) and Ken (K2, K3 and K5) were characterized by diverse fish fauna and high richness of threatened species. The higher mean trophic level scores were recorded at B4 of Betwa and K4 of Ken. The Bray-Curtis index for trophic level identified the carnivorous species (> 0.32) as an indicator species for pollution. Anthropogenic exposure, reflected in water quality as well as in fish community structure, was found higher especially in the lower stretches of both rivers. Our results suggest the importance of trophic metrics on fish community, for ecological conditions evaluation, which enables predictions on the effect of future morphodynamic changes (in the post-interlinking phases), and provide a framework and reference condition to support restoration efforts of relatively altered fish habitats in tropical rivers of India.

  3. Fish communities and trophic metrics as measures of ecological degradation: a case study in the tributaries of the river Ganga basin, India.

    Science.gov (United States)

    Dubey, Vineet Kumar; Sarkar, Uttam Kumar; Pandey, Ajay; Lakra, Wazir Singh

    2013-09-01

    In India, freshwater aquatic resources are suffering from increasing human population, urbanization and shortage of all kind of natural resources like water. To mitigate this, all the major rivers have been planned for a river-interlinking through an interlinking canal system under a huge scheme; yet, the baseline information on ecological conditions of those tropical rivers and their fish communities is lacking at present. In view of that, the present study was undertaken to assess the ecological condition by comparing the trophic metrics of the fish community, conservation status and water chemistry of the two tropical rivers of the Ganga basin, from October 2007 to November 2009. The analysis of trophic niches of the available fish species indicated dominancy of carnivorous (19 species) in river Ken and omnivorous (23 species) in Betwa. The trophic level score of carnivorous species was recorded similar (33.33%) in both rivers, whereas omnivorous species were mostly found in Betwa (36.51%) than Ken (28.07%). Relatively undisturbed sites of Betwa (B1, B2 and B3) and Ken (K2, K3 and K5) were characterized by diverse fish fauna and high richness of threatened species. The higher mean trophic level scores were recorded at B4 of Betwa and K4 of Ken. The Bray-Curtis index for trophic level identified the carnivorous species (> 0.32) as an indicator species for pollution. Anthropogenic exposure, reflected in water quality as well as in fish community structure, was found higher especially in the lower stretches of both rivers. Our results suggest the importance of trophic metrics on fish community, for ecological conditions evaluation, which enables predictions on the effect of future morphodynamic changes (in the post-interlinking phases), and provide a framework and reference condition to support restoration efforts of relatively altered fish habitats in tropical rivers of India. PMID:24027928

  4. Modelling the impacts of sea level rise on tidal basin ecomorphodynamics and mangrove habitat evolution

    Science.gov (United States)

    van Maanen, Barend; Coco, Giovanni; Bryan, Karin

    2016-04-01

    The evolution of tidal basins and estuaries in tropical and subtropical regions is often influenced by the presence of mangrove forests. These forests are amongst the most productive environments in the world and provide important ecosystem services. However, these intertidal habitats are also extremely vulnerable and are threatened by climate change impacts such as sea level rise. It is therefore of key importance to improve our understanding of how tidal systems occupied by mangrove vegetation respond to rising water levels. An ecomorphodynamic model was developed that simulates morphological change and mangrove forest evolution as a result of mutual feedbacks between physical and biological processes. The model accounts for the effects of mangrove trees on tidal flow patterns and sediment dynamics. Mangrove growth is in turn controlled by hydrodynamic conditions. Under stable water levels, model results indicate that mangrove trees enhance the initiation and branching of tidal channels, partly because the extra flow resistance in mangrove forests favours flow concentration, and thus sediment erosion in between vegetated areas. The landward expansion of the channels, on the other hand, is reduced. Model simulations including sea level rise suggest that mangroves can potentially enhance the ability of the soil surface to maintain an elevation within the upper portion of the intertidal zone. While the sea level is rising, mangroves are migrating landward and the channel network tends to expand landward too. The presence of mangrove trees, however, was found to hinder both the branching and headward erosion of the landward expanding channels. Simulations are performed according to different sea level rise scenarios and with different tidal range conditions to assess which tidal environments are most vulnerable. Changes in the properties of the tidal channel networks are being examined as well. Overall, model results highlight the role of mangroves in driving the

  5. Potential impacts of climate change on flow regime and fish habitat in mountain rivers of the south-western Balkans.

    Science.gov (United States)

    Papadaki, Christina; Soulis, Konstantinos; Muñoz-Mas, Rafael; Martinez-Capel, Francisco; Zogaris, Stamatis; Ntoanidis, Lazaros; Dimitriou, Elias

    2016-01-01

    The climate change in the Mediterranean area is expected to have significant impacts on the aquatic ecosystems and particular in the mountain rivers and streams that often host important species such as the Salmo farioides, Karaman 1938. These impacts will most possibly affect the habitat availability for various aquatic species resulting to an essential alteration of the water requirements, either for dams or other water abstractions, in order to maintain the essential levels of ecological flow for the rivers. The main scope of this study was to assess potential climate change impacts on the hydrological patterns and typical biota for a south-western Balkan mountain river, the Acheloos. The altered flow regimes under different emission scenarios of the Intergovernmental Panel on Climate Change (IPCC) were estimated using a hydrological model and based on regional climate simulations over the study area. The Indicators of Hydrologic Alteration (IHA) methodology was then used to assess the potential streamflow alterations in the studied river due to predicted climate change conditions. A fish habitat simulation method integrating univariate habitat suitability curves and hydraulic modeling techniques were used to assess the impacts on the relationships between the aquatic biota and hydrological status utilizing a sentinel species, the West Balkan trout. The most prominent effects of the climate change scenarios depict severe flow reductions that are likely to occur especially during the summer flows, changing the duration and depressing the magnitude of the natural low flow conditions. Weighted Usable Area-flow curves indicated the limitation of suitable habitat for the native trout. Finally, this preliminary application highlighted the potential of science-based hydrological and habitat simulation approaches that are relevant to both biological quality elements (fish) and current EU Water policy to serve as efficient tools for the estimation of possible climate

  6. Fish Passage Center; Columbia Basin Fish and Wildlife Authority, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    DeHart, Michele (Columbia Basin Fish and Wildlife Authority, Fish Passage Center, Portland, OR)

    2001-06-01

    The year 2000 hydrosystem operations illustrated two main points: (1) that the NMFS Biological Opinion on the operations of the Federal Columbia River Power System (FCRPS) fish migration measures could not be met in a slightly below average water year, and; (2) the impacts and relationships of energy deregulation and volatile wholesale energy prices on the ability of the FCRPS to provide the Biological Opinion fish migration measures. In 2000, a slightly below average water year, the flow targets were not met and, when energy ''emergencies'' were declared, salmon protection measures were reduced. The 2000 migration year was a below average runoff volume year with an actual run off volume of 61.1 MAF or 96% of average. This year illustrated the ability of the hydro system to meet the migration protection measures established by the NMFS Biological Opinion. The winter operation of storage reservoirs was based upon inaccurate runoff volume forecasts which predicted a January-July runoff volume forecast at The Dalles of 102 to 105% of average, from January through June. Reservoir flood control drafts during the winter months occurred according to these forecasts. This caused an over-draft of reservoirs that resulted in less volume of water available for fish flow augmentation in the spring and the summer. The season Biological Opinion flow targets for spring and summer migrants at Lower Granite and McNary dams were not met. Several power emergencies were declared by BPA in the summer of 2000. The first in June was caused by loss of resources (WNP2 went off-line). The second and third emergencies were declared in August as a result of power emergencies in California and in the Northwest. The unanticipated effects of energy deregulation, power market volatility and rising wholesale electricity prices, and Californian energy deregulation reduced the ability of the FCRPS to implement fish protection measures. A Spill Plan Agreement was implemented in

  7. Spectrum of Organochlorine Pesticide Residues in Fish Samples from the Densu Basin

    Directory of Open Access Journals (Sweden)

    Samuel Afful

    2010-07-01

    Full Text Available In this study, the levels of organochlorine pesticide residues in the Densu basin have been investigated using fish sam ples as a case study. Six fish species namely Heterotis niloticus, Channa obscura, Hepsetus odoe, Tilapia zilli, Clarias gariepinus and Chrysichthys nigrodigitatus were collected from the sampling towns, Weija and Nsawam along the Densu river basin in the Greater Accra Region of Ghana. Composite samples w ere homogenized, freeze dried and ground to obtain powdered samples. The powdered samples were extracted by soxhlet extraction procedure using (3:1 hexane: acetone mixture. The extracts were cleaned-up using florisil adsorbent and characterized for organochlorine content using Gas Chromatography (GC equipped with Electron Capture Detector (ECD. The GC recoveries of spiked samples were between 80 to 96%. Fourteen organochlorines (OCs namely gamma-HCH, delta-HCH, heptachlor, aldrin, gammachlordane, p,p’-DDE, alpha-endosulfan, dieldrin, endrin, endrin-aldehyde, endosulfan-sufate, p,p’-DDT, endrinketone and methoxychlor were identified and quantified. A 100% incidence was recorded for gamma-HCH, delta-HCH, heptachlor, aldrin, gamma-chlordane, alpha-endosulfan, dieldrin and p,p’-DDT, while 75% incidence was recorded for the metabolites, p,p’-DDE and endosulfan-sulfate. The concentrations of OCs ranged from 0.3 to 71.3 :g/kg and were however, below the Australian Maximum Residue Limits (MRL of 50 to 1000 :g/kg for fresh w ater fish.

  8. Fish assemblages of the Casiquiare River, a corridor and zoogeographical filter for dispersal between the Orinoco and Amazon basins

    Science.gov (United States)

    Winemiller, K.O.; Lopez-Fernandez, H.; Taphorn, D.C.; Nico, L.G.; Duque, A.B.

    2008-01-01

    Aim: The aim of this study was to determine whether the Casiquiare River functions as a free dispersal corridor or as a partial barrier (i.e. filter) for the interchange of fish species of the Orinoco and Negro/Amazon basins using species assemblage patterns according to geographical location and environmental features. Location: The Casiquiare, Upper Orinoco and Upper Negro rivers in southern Venezuela, South America. Methods: Our study was based on an analysis of species presence/absence data and environmental information (11 habitat characteristics) collected by the authors and colleagues between the years 1984 and 1999. The data set consisted of 269 sampled sites and 452 fish species (> 50,000 specimens). A wide range of habitat types was included in the samples, and the collection sites were located at various points along the entire length of the Casiquiare main channel, at multiple sites on its tributary streams, as well as at various nearby sites outside the Casiquiare drainage, within the Upper Orinoco and Upper Rio Negro river systems. Most specimens and field data used in this analysis are archived in the Museo de Ciencias Naturales in Guanare, Venezuela. We performed canonical correspondence analysis (CCA) based on species presence/absence using two versions of the data set: one that eliminated sites having < 5 species and species occurring at < 5 sites; and another that eliminated sites having < 10 species and species occurring at < 10 sites. Cluster analysis was performed on sites based on species assemblage similarity, and a separate analysis was performed on species based on CCA loadings. Results: The CCA results for the two versions of the data set were qualitatively the same. The dominant environmental axis contrasted assemblages and sites associated with blackwater vs. clearwater conditions. Longitudinal position on the Casiquiare River was correlated (r2 = 0.33) with CCA axis-1 scores, reflecting clearwater conditions nearer to its origin

  9. Exploring geomorphic controls on fish bioenergetics in mountain streams: linkages between channel morphology and rearing habitat for cutthroat trout

    Science.gov (United States)

    Cienciala, P.; Hassan, M. A.

    2013-12-01

    Landscape heterogeneity constitutes an important control on spatial distribution of habitat for living organisms, at a range of spatial scales. For example, spatial variation in geomorphic processes can spatially structure populations as well as entire communities, and affect various ecosystem processes. We have coupled a 2D hydrodynamic model with a bioenergetic model to study the effects of various channel morphologies and bed textures on rearing habitat for coastal cutthroat trout (Oncorhynchus clarki clarki) in four reaches of a mountain stream. The bioenergetic model uses energy conservation principle to calculate energy budget for fish at any point of the study domain, given a set of relevant local conditions. Specifically, the energy intake is a function of food availability (invertebrate drift) while the energy expenditure occurs through, for example, basal metabolism and swimming to hold position against the flow. Channel morphology and bed texture, through their influence on channel hydraulics, can exert strong control on the spatial pattern of both food flux and swimming cost for drift-feeding fish. Therefore, the coupled hydrodynamic and bioenergetic models, parameterized using an extensive field data set, enabled us to explore mechanistic linkages between geomorphic properties of the study reaches, food resource availability, and the energetic profitability of rearing habitat for different age-classes at both between- and within-reach spatial scales.

  10. Climate warming reduces fish production and benthic habitat in Lake Tanganyika, one of the most biodiverse freshwater ecosystems

    Science.gov (United States)

    Cohen, Andrew S.; Gergurich, Elizabeth L.; Kraemer, Benjamin M.; McGlue, Michael M.; McIntyre, Peter B.; Russell, James M.; Simmons, Jack D.; Swarzenski, Peter W.

    2016-01-01

    Warming climates are rapidly transforming lake ecosystems worldwide, but the breadth of changes in tropical lakes is poorly documented. Sustainable management of freshwater fisheries and biodiversity requires accounting for historical and ongoing stressors such as climate change and harvest intensity. This is problematic in tropical Africa, where records of ecosystem change are limited and local populations rely heavily on lakes for nutrition. Here, using a ∼1,500-y paleoecological record, we show that declines in fishery species and endemic molluscs began well before commercial fishing in Lake Tanganyika, Africa’s deepest and oldest lake. Paleoclimate and instrumental records demonstrate sustained warming in this lake during the last ∼150 y, which affects biota by strengthening and shallowing stratification of the water column. Reductions in lake mixing have depressed algal production and shrunk the oxygenated benthic habitat by 38% in our study areas, yielding fish and mollusc declines. Late-20th century fish fossil abundances at two of three sites were lower than at any other time in the last millennium and fell in concert with reduced diatom abundance and warming water. A negative correlation between lake temperature and fish and mollusc fossils over the last ∼500 y indicates that climate warming and intensifying stratification have almost certainly reduced potential fishery production, helping to explain ongoing declines in fish catches. Long-term declines of both benthic and pelagic species underscore the urgency of strategic efforts to sustain Lake Tanganyika’s extraordinary biodiversity and ecosystem services.

  11. Climate warming reduces fish production and benthic habitat in Lake Tanganyika, one of the most biodiverse freshwater ecosystems.

    Science.gov (United States)

    Cohen, Andrew S; Gergurich, Elizabeth L; Kraemer, Benjamin M; McGlue, Michael M; McIntyre, Peter B; Russell, James M; Simmons, Jack D; Swarzenski, Peter W

    2016-08-23

    Warming climates are rapidly transforming lake ecosystems worldwide, but the breadth of changes in tropical lakes is poorly documented. Sustainable management of freshwater fisheries and biodiversity requires accounting for historical and ongoing stressors such as climate change and harvest intensity. This is problematic in tropical Africa, where records of ecosystem change are limited and local populations rely heavily on lakes for nutrition. Here, using a ∼1,500-y paleoecological record, we show that declines in fishery species and endemic molluscs began well before commercial fishing in Lake Tanganyika, Africa's deepest and oldest lake. Paleoclimate and instrumental records demonstrate sustained warming in this lake during the last ∼150 y, which affects biota by strengthening and shallowing stratification of the water column. Reductions in lake mixing have depressed algal production and shrunk the oxygenated benthic habitat by 38% in our study areas, yielding fish and mollusc declines. Late-20th century fish fossil abundances at two of three sites were lower than at any other time in the last millennium and fell in concert with reduced diatom abundance and warming water. A negative correlation between lake temperature and fish and mollusc fossils over the last ∼500 y indicates that climate warming and intensifying stratification have almost certainly reduced potential fishery production, helping to explain ongoing declines in fish catches. Long-term declines of both benthic and pelagic species underscore the urgency of strategic efforts to sustain Lake Tanganyika's extraordinary biodiversity and ecosystem services. PMID:27503877

  12. Climate warming reduces fish production and benthic habitat in Lake Tanganyika, one of the most biodiverse freshwater ecosystems.

    Science.gov (United States)

    Cohen, Andrew S; Gergurich, Elizabeth L; Kraemer, Benjamin M; McGlue, Michael M; McIntyre, Peter B; Russell, James M; Simmons, Jack D; Swarzenski, Peter W

    2016-08-23

    Warming climates are rapidly transforming lake ecosystems worldwide, but the breadth of changes in tropical lakes is poorly documented. Sustainable management of freshwater fisheries and biodiversity requires accounting for historical and ongoing stressors such as climate change and harvest intensity. This is problematic in tropical Africa, where records of ecosystem change are limited and local populations rely heavily on lakes for nutrition. Here, using a ∼1,500-y paleoecological record, we show that declines in fishery species and endemic molluscs began well before commercial fishing in Lake Tanganyika, Africa's deepest and oldest lake. Paleoclimate and instrumental records demonstrate sustained warming in this lake during the last ∼150 y, which affects biota by strengthening and shallowing stratification of the water column. Reductions in lake mixing have depressed algal production and shrunk the oxygenated benthic habitat by 38% in our study areas, yielding fish and mollusc declines. Late-20th century fish fossil abundances at two of three sites were lower than at any other time in the last millennium and fell in concert with reduced diatom abundance and warming water. A negative correlation between lake temperature and fish and mollusc fossils over the last ∼500 y indicates that climate warming and intensifying stratification have almost certainly reduced potential fishery production, helping to explain ongoing declines in fish catches. Long-term declines of both benthic and pelagic species underscore the urgency of strategic efforts to sustain Lake Tanganyika's extraordinary biodiversity and ecosystem services.

  13. Extent of mangrove nursery habitats determines the geographic distribution of a coral reef fish in a South-Pacific archipelago.

    Directory of Open Access Journals (Sweden)

    Christelle Paillon

    Full Text Available Understanding the drivers of species' geographic distribution has fundamental implications for the management of biodiversity. For coral reef fishes, mangroves have long been recognized as important nursery habitats sustaining biodiversity in the Western Atlantic but there is still debate about their role in the Indo-Pacific. Here, we combined LA-ICP-MS otolith microchemistry, underwater visual censuses (UVC and mangrove cartography to estimate the importance of mangroves for the Indo-Pacific coral reef fish Lutjanus fulviflamma in the archipelago of New Caledonia. Otolith elemental compositions allowed high discrimination of mangroves and reefs with 83.8% and 98.7% correct classification, respectively. Reefs were characterized by higher concentrations of Rb and Sr and mangroves by higher concentrations of Ba, Cr, Mn and Sn. All adult L. fulviflamma collected on reefs presented a mangrove signature during their juvenile stage with 85% inhabiting mangrove for their entire juvenile life (about 1 year. The analysis of 2942 UVC revealed that the species was absent from isolated islands of the New Caledonian archipelago where mangroves were absent. Furthermore, strong positive correlations existed between the abundance of L. fulviflamma and the area of mangrove (r = 0.84 for occurrence, 0.93 for density and 0.89 for biomass. These results indicate that mangrove forest is an obligatory juvenile habitat for L. fulviflamma in New Caledonia and emphasize the potential importance of mangroves for Indo-Pacific coral reef fishes.

  14. Non-parametric methods – Tree and P-CFA – for the ecological evaluation and assessment of suitable aquatic habitats: A contribution to fish psychology

    Directory of Open Access Journals (Sweden)

    Andreas H. Melcher

    2012-09-01

    Full Text Available This study analyses multidimensional spawning habitat suitability of the fish species “Nase” (latin: Chondrostoma nasus. This is the first time non-parametric methods were used to better understand biotic habitat use in theory and practice. In particular, we tested (1 the Decision Tree technique, Chi-squared Automatic Interaction Detectors (CHAID, to identify specific habitat types and (2 Prediction-Configural Frequency Analysis (P-CFA to test for statistical significance. The combination of both non-parametric methods, CHAID and P-CFA, enabled the identification, prediction and interpretation of most typical significant spawning habitats, and we were also able to determine non-typical habitat types, e.g., types in contrast to antitypes. The gradual combination of these two methods underlined three significant habitat types: shaded habitat, fine and coarse substrate habitat depending on high flow velocity. The study affirmed the importance for fish species of shading and riparian vegetation along river banks. In addition, this method provides a weighting of interactions between specific habitat characteristics. The results demonstrate that efficient river restoration requires re-establishing riparian vegetation as well as the open river continuum and hydro-morphological improvements to habitats.

  15. Fish Passage Center; Columbia Basin Fish and Wildlife Authority, 1993 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Unknown author

    1994-04-01

    The 1993 downstream migration of juvenile salmon experienced much better outmigration conditions than in recent years. Higher flows occurred in the spring, due to above-average spring precipitation and larger runoff volumes. Higher flows in the summer period resulted from implementation of Opinion flow targets. All indicators, passage indices, proportion of marks reaptured, and migration duration and pattern, indicate that fall chinook juveniles in particular benefitted from the passage conditions provided in 1993. Wild and hatchery spring chinook and steelhead responded to the conditions provided with faster travel times and a higher proportion reaching sample sites, when compared to past years, indicating improved survival. High uncontrolled runoff resulted in higher spill levels, benefitting fish passage, but also minor incidence of gas bubble trauma. Large scale problems were not observed. Very low returns of chinook jacks and one salt steelhead reflected the dismal outmigration conditions provided under the 1992 mitigation measures.

  16. Habitat Selection and Reproductive Success of White-faced Ibis in the Carson River Basin, Nevada: Final Progress Report for the 1996 Season

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Great Basin White-faced Ibis (Plegadis chihi) population is listed under category 2 of the Endangered Species Act because of its dependence on closed, isolated,...

  17. Reconstructing fish movements between coastal wetland and nearshore habitats of the Great Lakes

    Science.gov (United States)

    The use of resources from multiple habitats has been shown to be important to the production of aquatic consumers. To quantify the support of Great Lakes coastal wetland (WL) and nearshore (NS) habitats to yellow perch, we used otolith microchemistry to trace movements between th...

  18. Habitat use by fishes of Lake Superior. I. Diel patterns of habitat use in nearshore and offshore waters of the Apostle Islands region

    Science.gov (United States)

    Gorman, O.T.; Yule, D.L.; Stockwell, J.D.

    2012-01-01

    expressing DVM accounted for 73% of the total estimated community areal biomass (kg ha−1) while those expressing DBM accounted for 25% and non-migratory species represented 2% of the biomass. The proportion of total community biomass exhibiting DVM increased with depth, from 59% to 95% across ≤30 m to >90 m depth zones. Along the same depth gradient, the proportion of total community biomass exhibiting DBM declined from 40% to 1%, while non-migrators increased from 1% to 4%. These results indicate that DVM and DBM behaviors are pervasive in the Lake Superior fish community and potentially provide strong linkages that effect coupling of benthic and pelagic and nearshore and offshore habitats.

  19. A prediction of the global habitat of two invasive fishes (Pseudorasbora parva and Carassius auratus from East Asia using Maxent

    Directory of Open Access Journals (Sweden)

    Xi’ao Zhang

    2014-03-01

    Full Text Available The topmouth gudgeon (Pseudorasbora parva and goldfish (Carassius auratus, two small omnivorous freshwater fishes, have been introduced into many countries by human activities during recent years. Wide and severe ecological harm has resulted from the pathogens that these fishes carried and from the extremely large populations of these fishes. Based on data from a large number of distribution points systematically identified by our long-term sampling survey and from the FishBase, and on high-resolution environmental data, we used Maxent to obtain the first prediction of the potential global distribution of the two fishes. The results of the study suggest that the topmouth gudgeon and goldfish have an extremely wide potential range in the world and that this is especially the case for the goldfish. In fact, all continents except Antarctica include many potential habitats for the two fishes. Accordingly, these two fishes may spread more widely and create more serious danger to the aquatic ecosystem in the future as human activities continue to expand. Especially, the Mississippi valley in the middle part, and the eastern and southern coasts of the United States of America, region from Seattle to Vancouver of Canada will be the areas of the topmouth gudgeon with highly potential invasive risk. And those areas for goldfish will be the countries of Argentina and Brazil in South America, Guinea and Cameroon in West Africa. Our results also suggest that the use of Maxent with comprehensive distribution data and high resolution environmental data represents a new and valid method for obtaining early warnings serving to prevent the danger of biological invasion.

  20. Interaction between spawning habitat and coastally steered circulation regulate larval fish retention in a large shallow temperate bay

    Science.gov (United States)

    Álvarez, Itziar; Catalán, Ignacio A.; Jordi, Antoni; Alemany, Francisco; Basterretxea, Gotzon

    2015-12-01

    Larval retention plays a fundamental role in the persistence of coastal fish assemblages. Here, we examine larval fish distribution and abundance patterns in Palma Bay, a large (˜20 km) wind-driven microtidal bay in the southern coast of Mallorca (Spain, NW Mediterranean Sea). Larval fish assemblage structure in the bay were analyzed during July 2010 and interpreted in the context of the observed circulation patterns, adult habitat distribution and spawning traits. Acoustic Doppler Current Profiler (ADCP) observations showed the presence of retentive flow patterns in the middle of the bay enhancing local larval accumulation and self-recruitment. In consequence, larval abundances were higher in this central part of the bay (˜40 m depth, mean abundance 607.6 ± 383 ind. 10 m-2) than along the coastal fringe (RDA) revealed differences between the larval fish assemblages in areas inside the bay, constituted by small pelagic and benthopelagic taxa (gobids, Chromis chromis and Serranus hepatus) and offshore larvae, mostly from meso and large pelagic fish. These larval fish assemblages were structured according to depth variations and zooplankton abundance, and remained relatively unmixed because of the circulation patterns in the mouth of the bay that uncouple its dynamics from alongshelf circulation. Even larvae of typically pelagic species that spawn close to the coast (Sardinella aurita, Auxis rochei) were associated with the retentive effect of the bay. Our study highlights the important role of coastal bays in the regulation of coastal fish population dynamics and as hotspots for the maintenance of diversity in the Mediterranean Sea.

  1. Fish Migration, Dams, and Loss of Ecosystem Services in the Mekong Basin

    Energy Technology Data Exchange (ETDEWEB)

    Dugan, Patrick J. [WorldFish Center; Barlow, Chris [Australian Center for International Agricultural Research (ACIAR); Agostinho, Angelo A. [Fundacao University, Parana Brazil; Baran, Eric [WorldFish Center; Cada, Glenn F [ORNL; Chen, Daqing [Yangtze River Fisheries Research Institute, People' s Republic of China; Cowx, Ian G. [Hull International Fisheries Research Institute, England; Ferguson, John W. [North West Fisheries Science Center, Seattle, WA; Jutagate, Tuantong [Ubon Ratchathani University, Ubon Ratchathani, Thailand; Mallen-Cooper, Martin [Fishway Consulting Service, Australia; Marmulla, Gerd [Food and Agriculture Organization of the United Nations (FAO), Rome, Italy; Nestler, John [USA Corps Engineers, Concord, MA USA; Petrere, Miquel [Universidade Estadual Paulista, Rio Claro, Brazil; Winemiller, Kirk O. [Texas A& M University

    2010-06-01

    The past decade has seen increased international recognition of the importance of the services provided by natural ecosystems. It is unclear however whether such international awareness will lead to improved environmental management in many regions. We explore this issue by examining the specific case of fish migration and dams on the Mekong river. We determine that dams on the Mekong mainstem and major tributaries will have a major impact on the basin's fisheries and the people who depend upon them for food and income. We find no evidence that current moves towards dam construction will stop, and consider two scenarios for the future of the fisheries and other ecosystems of the basin. We conclude that major investment is required in innovative technology to reduce the loss of ecosystem services, and alternative livelihood strategies to cope with the losses that do occur

  2. Spatially explicit habitat models for 28 fishes from the Upper Mississippi River System (AHAG 2.0)

    Science.gov (United States)

    Ickes, Brian S.; Sauer, J.S.; Richards, N.; Bowler, M.; Schlifer, B.

    2014-01-01

    Environmental management actions in the Upper Mississippi River System (UMRS) typically require pre-project assessments of predicted benefits under a range of project scenarios. The U.S. Army Corps of Engineers (USACE) now requires certified and peer-reviewed models to conduct these assessments. Previously, habitat benefits were estimated for fish communities in the UMRS using the Aquatic Habitat Appraisal Guide (AHAG v.1.0; AHAG from hereon). This spreadsheet-based model used a habitat suitability index (HSI) approach that drew heavily upon Habitat Evaluation Procedures (HEP; U.S. Fish and Wildlife Service, 1980) by the U.S. Fish and Wildlife Service (USFWS). The HSI approach requires developing species response curves for different environmental variables that seek to broadly represent habitat. The AHAG model uses species-specific response curves assembled from literature values, data from other ecosystems, or best professional judgment. A recent scientific review of the AHAG indicated that the model’s effectiveness is reduced by its dated approach to large river ecosystems, uncertainty regarding its data inputs and rationale for habitat-species response relationships, and lack of field validation (Abt Associates Inc., 2011). The reviewers made two major recommendations: (1) incorporate empirical data from the UMRS into defining the empirical response curves, and (2) conduct post-project biological evaluations to test pre-project benefits estimated by AHAG. Our objective was to address the first recommendation and generate updated response curves for AHAG using data from the Upper Mississippi River Restoration-Environmental Management Program (UMRR-EMP) Long Term Resource Monitoring Program (LTRMP) element. Fish community data have been collected by LTRMP (Gutreuter and others, 1995; Ratcliff and others, in press) for 20 years from 6 study reaches representing 1,930 kilometers of river and >140 species of fish. We modeled a subset of these data (28 different

  3. Salmon River Habitat Enhancement, Part 1 of 2, 1986 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Richards, Carl

    1987-03-01

    The tribal project annual report contains reports for four subprojects within Project 83-359. Subproject I involved fish inventories in Bear Valley Creek, Idaho, that will be used in conjunction with 1984 and 1985 fish and habitat pre-treatment (baseline) data to evaluate effects of habitat enhancement on the habitat and fish community in Bear Valley Creek overtime. Subproject II is the coordination/planning activities of the Project Leader in relation to other BPA-funded habitat enhancement projects that have or will occur in the upper-Salmon River basin. Subproject III involved fish inventories (pre-treatment) in the Yankee Fork drainage of the Salmon River, and habitat problem identification on Fivemile and Ramey Creek. Subproject IV involved baseline habitat and fish inventories on the East Fork of the Salmon River, Herd Creek and Big-Boulder Creek. Individual abstracts have been prepared for the four subproject reports. 20 refs., 37 figs., 22 tabs.

  4. Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan for Fiscal Year 1989.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration; Northwest Power Planning Council (U.S.); Columbia Basin Fish and Wildlife Authority

    1988-09-01

    The Columbia River Basin Fish and Wildlife Program (Program) was developed by the Northwest Power Planning Council (Council) in accordance with Public Law 96-501. the Pacific Northwest Electric Power Planning and Conservation Act (Act). The purpose of the Program is to guide the Bonneville Power Administration (BPA) and other Federal agencies in carrying out their responsibilities to protect, mitigate, and enhance fish and wildlife of the Columbia River Basin. The Act explicitly gives BPA the authority and responsibility to use the BPA fund for these ends, to the extent that fish and wildlife are affected by the development and operation of hydroelectric generation in the Columbia River Basin. This document presents BPA's plans for implementing the Program during Fiscal Year (FY) 1989. BPA's Columbia River Basin Fish and Wildlife Program Work Plan (Work Plan) reflects the primary goals of the Council's Action Plan (Section 1400 of the Program): to provide a solid, timely, and focused basis for budgeting and planning. In addition, BPA's Work Plan provides a means to judge progress and the success of Program implementation. This Work Plan has been organized and written to meet the specific needs of the Council's Action Plan, as described in Action Items 10.1-10.3 of the Program. The Work Plan includes schedules with key milestones for FY 1989 and beyond, and is organized to address the Action Items assigned to BPA in Section 1400 of the 1987 Program. All BPA-funded projects discussed in the FY 1989 Work Plan are listed in Tables 1 and 2 according to their current status. Table 1 (pp. 3-11) lists completed, ongoing, and deferred projects. Table 2 (pp. 12-13) lists all projects which BPA plans to fund as ''new'' projects in FY 1989. ''Ongoing'' status indicates that the project started in FY 1988 or before, and that it was still being implemented by BPA at the end of FY 1988. &apos

  5. Karyotype similarity between two sympatric Schizodon fish species (Anostomidae, Characiformes from the Paraguay River basin

    Directory of Open Access Journals (Sweden)

    Martins Cesar

    1998-01-01

    Full Text Available Fish of the neotropical family Anostomidae generally show low karyotype variability. Nevertheless, karyotype variants have been identified within some genera, providing information about their evolutionary history. Species of the genus Schizodon show a high degree of morphological and ecological similarity compared to other anostomids. In the present study, karyotype characteristics of Schizodon borelli (40 individuals and S. isognathum (one individual, two sympatric species found in the Paraguay River basin, were studied. C-banding, GC-specific fluorochrome Mitramycin (MM and Ag staining as well as in situ hybridization (FISH with rDNA probes were used. The karyotypes of these species were found to be very similar. Only two NORs were detected in a common chromosome pair of both species under Ag, MM and FISH treatments. Similar heterochromatin distribution patterns were also observed. A parallelism between the small karyotype variation and low morphological and ecological divergence observed for this genus is discussed. Their karyotype homogeneity might be related to populational features or, alternatively, might indicate that the maintenance of a symmetric and conserved karyotype structure represents optimal genomic organization among these fish.

  6. Functional composition of epifauna in the south-eastern North Sea in relation to habitat characteristics and fishing effort

    Science.gov (United States)

    Neumann, Hermann; Diekmann, Rabea; Kröncke, Ingrid

    2016-02-01

    Analysis of ecosystem functioning is essential to describe the ecological status of ecosystems and is therefore directly requested in international directives. There is a lack of knowledge regarding functional aspects of benthic communities and their environmental and anthropogenic driving forces in the southern North Sea. This study linked functional composition of epibenthic communities to environmental conditions and fishing effort and investigated spatial correlations between habitat characteristics to gain insight into potential synergistic and/or cumulative effects. Functional composition of epifauna was assessed by using biological trait analysis (BTA), which considered 15 ecological traits of 54 species. Functional composition was related to ten predictor variables derived from sediment composition, bottom temperature and salinity, hydrodynamics, annual primary production and fishing effort. Our results revealed significantly different functional composition between the Dogger Bank, the Oyster Ground, the West and North Frisian coast. Mobility, feeding type, size and adult longevity were the most important traits differentiating the communities. A high proportion of trait modalities related to an opportunistic life mode were obvious in coastal areas especially at the West Frisian coast and in the area of the Frisian Front indicating disturbed communities. In contrast, functional composition in the Dogger Bank area indicated undisturbed communities with prevalence of large, long-lived and permanently attached species being sensitive towards disturbance such as fishing. Tidal stress, mud content of sediments, salinity, stratification and fishing effort were found to be the most important habitat characteristics shaping functional composition. Strong correlations were found between variables, especially between those which changed gradually from the coast to offshore areas including fishing effort. Unfavourable extremes of these factors in coastal areas

  7. Estuarine fish communities respond to climate variability over both river and ocean basins

    Science.gov (United States)

    Feyrer, Frederick V.; Cloern, James E.; Brown, Larry R.; Fish, Maxfield; Hieb, Kathryn; Baxter, Randall

    2015-01-01

    Estuaries are dynamic environments at the land–sea interface that are strongly affected by interannual climate variability. Ocean–atmosphere processes propagate into estuaries from the sea, and atmospheric processes over land propagate into estuaries from watersheds. We examined the effects of these two separate climate-driven processes on pelagic and demersal fish community structure along the salinity gradient in the San Francisco Estuary, California, USA. A 33-year data set (1980–2012) on pelagic and demersal fishes spanning the freshwater to marine regions of the estuary suggested the existence of five estuarine salinity fish guilds: limnetic (salinity = 0–1), oligohaline (salinity = 1–12), mesohaline (salinity = 6–19), polyhaline (salinity = 19–28), and euhaline (salinity = 29–32). Climatic effects propagating from the adjacent Pacific Ocean, indexed by the North Pacific Gyre Oscillation (NPGO), affected demersal and pelagic fish community structure in the euhaline and polyhaline guilds. Climatic effects propagating over land, indexed as freshwater outflow from the watershed (OUT), affected demersal and pelagic fish community structure in the oligohaline, mesohaline, polyhaline, and euhaline guilds. The effects of OUT propagated further down the estuary salinity gradient than the effects of NPGO that propagated up the estuary salinity gradient, exemplifying the role of variable freshwater outflow as an important driver of biotic communities in river-dominated estuaries. These results illustrate how unique sources of climate variability interact to drive biotic communities and, therefore, that climate change is likely to be an important driver in shaping the future trajectory of biotic communities in estuaries and other transitional habitats.

  8. What is the impact on fish recruitment of anthropogenic physical and structural habitat change in shallow nearshore areas in temperate systems? A systematic review protocol

    DEFF Research Database (Denmark)

    MacUra, B.; Lönnstedt, O.M.; Byström, P.;

    2016-01-01

    Background: Shallow nearshore marine ecosystems are changing at an increasing rate due to a range of human activities such as urbanisation and commercial development. The growing numbers of constructions and other physical and structural alterations of the shoreline often take place in nursery...... and spawning habitats of many fish and other aquatic species. Several coastal fish populations have seen marked declines in abundance and diversity during the past two decades. A systematic review on the topic would clarify if anthropogenic physical and structural changes of near-shore areas have effects...... on fish recruitment and which these effects are. Methods: The review will examine how various physical and structural anthropogenic changes of nearshore fish habitats affect fish recruitment. Relevant studies include small- and large-scale field studies in marine and brackish systems or large lakes...

  9. Reef fishes can recognize bleached habitat during settlement: sea anemone bleaching alters anemonefish host selection.

    Science.gov (United States)

    Scott, Anna; Dixson, Danielle L

    2016-05-25

    Understanding how bleaching impacts the settlement of symbiotic habitat specialists and whether there is flexibility in settlement choices with regard to habitat quality is essential given our changing climate. We used five anemonefishes (Amphiprion clarkii, Amphiprion latezonatus, Amphiprion ocellaris, Amphiprion percula and Premnas biaculeatus) and three host sea anemones (Entacmaea quadricolor, Heteractis crispa and Heteractis magnifica) in paired-choice flume experiments to determine whether habitat naive juveniles have the olfactory capabilities to distinguish between unbleached and bleached hosts, and how this may affect settlement decisions. All anemonefishes were able to distinguish between bleached and unbleached hosts, and responded only to chemical cues from species-specific host anemones irrespective of health status, indicating a lack of flexibility in host use. While bleached hosts were selected as habitat, this occurred only when unbleached options were unavailable, with the exception of A. latezonatus, which showed strong preferences for H. crispa regardless of health. This study highlights the potential deleterious indirect impacts of declining habitat quality during larval settlement in habitat specialists, which could be important in the field, given that bleaching events are becoming increasingly common. PMID:27226472

  10. Does Habitat Restoration Increase Coexistence of Native Stream Fishes with Introduced Brown Trout: A Case Study on the Middle Provo River, Utah, USA

    Directory of Open Access Journals (Sweden)

    Mark C. Belk

    2016-03-01

    Full Text Available Restoration of altered or degraded habitats is often a key component in the conservation plan of native aquatic species, but introduced species may influence the response of the native community to restoration. Recent habitat restoration of the middle section of the Provo River in central Utah, USA, provided an opportunity to evaluate the effect of habitat restoration on the native fish community in a system with an introduced, dominant predator—brown trout (Salmo trutta. To determine the change in distribution of fish species and community composition, we surveyed 200 m of each of the four study reaches both before restoration (1998 and after restoration (2007 and 2009. Juveniles and adults of six native species increased in distribution after restoration. The variation in fish community structure among reaches was lower post-restoration than pre-restoration. Overall, restoration of complex habitat in the middle Provo River led to increased pattern of coexistence between native fishes and introduced brown trout, but restoration activities did not improve the status of the river’s two rarest native fish species. Habitat restoration may only be completely successful in terms of restoring native communities when the abundance of invasive species can be kept at low levels.

  11. Evaluation of Fish Passage Sites in the Walla Walla River Basin, 2008

    Energy Technology Data Exchange (ETDEWEB)

    Chamness, Mickie A. [Pacific Northwest National Laboratory

    2008-08-29

    In 2008, Pacific Northwest National Laboratory evaluated the Hofer Dam fish screen and provided technical assistance at two other fish passage sites as requested by the Bonneville Power Administration, the Walla Walla Watershed Council, or the Confederated Tribes of the Umatilla Indian Reservation. Evaluation of new sites such as Hofer Dam focuses on their design, construction, operation, and maintenance to determine if they effectively provide juvenile salmonids with safe passage through irrigation diversions. There were two requests for technical assistance in 2008. In the first, the Confederated Tribes of the Umatilla Indian Reservation requested an evaluation of the Nursery Bridge fish screens associated with the fish ladder on the east side of the Walla Walla River. One set of brushes that clean the screens was broken for an extended period. Underwater videography and water velocity measurements were used to determine there were no potential adverse effects on juvenile salmonids when the west set of screens was clean enough to pass water normally. A second request, received from the National Marine Fisheries Service and the Walla Walla Watershed Council, asked for evaluation of water velocities through relatively new head gates above and adjacent to the Eastside Ditch fish screens on the Walla Walla River. Water moving through the head gates and not taken for irrigation is diverted to provide water for the Nursery Bridge fish ladder on the east side of the river. Elevations used in the design of the head gates were incorrect, causing excessive flow through the head gates that closely approached or exceeded the maximum swimming burst speed of juvenile salmonids. Hofer Dam was evaluated in June 2008. PNNL researchers found that conditions at Hofer Dam will not cause impingement or entrainment of juvenile salmonids but may provide habitat for predators and lack strong sweeping flows to encourage juvenile salmonid passage downstream. Further evaluation of

  12. Assessment of Fish Habitat, Water Quality, and Selected Contaminants in Streambed Sediments in Noyes Slough, Fairbanks, Alaska, 2001-2002

    Science.gov (United States)

    Kennedy, Ben W.; Whitman, Matthew S.; Burrows, Robert L.; Richmond, Sharon A.

    2004-01-01

    During 2001-2002, the U.S. Geological Survey sampled streambed sediment at 23 sites, measured water quality at 26 sites, and assessed fish habitat for the entire length of Noyes Slough, a 5.5-mile slough of the Chena River in Fairbanks, Alaska. These studies were undertaken to document the environmental condition of the slough and to provide information to the public for consideration in plans to improve environmental conditions of the waterway. The availability of physical habitat for fish in the slough does not appear to be limited, although some beaver dams and shallow water may restrict movement, particularly during low flow. Elevated water temperatures in summer and low dissolved-oxygen concentrations are the principle factors adversely affecting water quality in Noyes Slough. Increased flow mitigated poor water-quality conditions and reduced the number of possible fish barriers. Flow appears to be the most prominent mechanism shaping water quality and fish habitat in Noyes Slough. Streambed sediment samples collected at 23 sites in 2001 were analyzed for 24 trace elements. Arsenic, lead, and zinc were the only trace elements detected in concentrations that exceed probable effect levels for the protection of aquatic life. The background concentration for arsenic in Noyes Slough is naturally elevated because of significant concentrations of arsenic in local bedrock and ground water. Sources of the zinc and lead contamination are uncertain, however both lead and zinc are common urban contaminants. Streambed-sediment samples from 12 sites in 2002 were analyzed for organochlorine pesticides, polychlorinated biphenyls (PCBs), and semivolatile organic compounds (SVOCs). The concentration of bis(2-ethylhexyl)phthalate of 2,600 micrograms per kilogram (?g/kg) for one sample from the site above Aurora Drive approached the aquatic-life criterion of 2,650 ?g/kg. Low concentrations of p-cresol, chrysene, and fluoranthene were detected in most of the sediment samples. The

  13. Pedogenic carbonate stable isotopic evidence for wooded habitat preference of early Pleistocene tool makers in the Turkana Basin.

    Science.gov (United States)

    Quinn, Rhonda L; Lepre, Christopher J; Feibel, Craig S; Wright, James D; Mortlock, Richard A; Harmand, Sonia; Brugal, Jean-Philip; Roche, Hélène

    2013-07-01

    The origin and evolution of early Pleistocene hominin lithic technologies in Africa occurred within the context of savanna grassland ecosystems. The Nachukui Formation of the Turkana Basin in northern Kenya, containing Oldowan and Acheulean tool assemblages and fossil evidence for early members of Homo and Paranthropus, provides an extensive spatial and temporal paleosol record of early Pleistocene savanna flora. Here we present new carbon isotopic (δ(13)CVPDB) values of pedogenic carbonates (68 nodules, 193 analyses) from the Nachukui Formation in order to characterize past vegetation structure and change through time. We compared three members (Kalochoro, Kaitio, and Natoo) at five locations spanning 2.4-1.4Ma and sampled in proximity to hominin archaeological and paleontological sites. Our results indicate diverse habitats showing a mosaic pattern of vegetation cover at each location yet demonstrate grassland expansion through time influenced by paleogeography. Kalochoro floodplains occurred adjacent to large river systems, and paleosols show evidence of C3 woodlands averaging 46-50% woody cover. Kaitio habitats were located along smaller rivers and lake margins. Paleosols yielded evidence for reduced portions of woody vegetation averaging 34-37% woody cover. Natoo environments had the highest percentage of grasslands averaging 21% woody cover near a diminishing Lake Turkana precursor. We also compared paleosol δ(13)CVPDB values of lithic archaeological sites with paleosol δ(13)CVPDB values of all environments available to hominins at 2.4-1.4Ma in the Nachukui and Koobi Fora Formations. Grassy environments became more widespread during this interval; woody canopy cover mean percentages steadily decreased by 12%. However, significantly more wooded savanna habitats were present in the vicinity of lithic archaeological sites and did not mirror the basin-wide trend of grassland spread. Hominin lithic archaeological sites consistently demonstrated woody cover

  14. Population trends, bend use relative to available habitat and within-river-bend habitat use of eight indicator species of Missouri and Lower Kansas River benthic fishes: 15 years after baseline assessment

    Science.gov (United States)

    Wildhaber, Mark L.; Yang, Wen-Hsi; Arab, Ali

    2016-01-01

    A baseline assessment of the Missouri River fish community and species-specific habitat use patterns conducted from 1996 to 1998 provided the first comprehensive analysis of Missouri River benthic fish population trends and habitat use in the Missouri and Lower Yellowstone rivers, exclusive of reservoirs, and provided the foundation for the present Pallid Sturgeon Population Assessment Program (PSPAP). Data used in such studies are frequently zero inflated. To address this issue, the zero-inflated Poisson (ZIP) model was applied. This follow-up study is based on PSPAP data collected up to 15 years later along with new understanding of how habitat characteristics among and within bends affect habitat use of fish species targeted by PSPAP, including pallid sturgeon. This work demonstrated that a large-scale, large-river, PSPAP-type monitoring program can be an effective tool for assessing population trends and habitat usage of large-river fish species. Using multiple gears, PSPAP was effective in monitoring shovelnose and pallid sturgeons, sicklefin, shoal and sturgeon chubs, sand shiner, blue sucker and sauger. For all species, the relationship between environmental variables and relative abundance differed, somewhat, among river segments suggesting the importance of the overall conditions of Upper and Middle Missouri River and Lower Missouri and Kansas rivers on the habitat usage patterns exhibited. Shoal and sicklefin chubs exhibited many similar habitat usage patterns; blue sucker and shovelnose sturgeon also shared similar responses. For pallid sturgeon, the primary focus of PSPAP, relative abundance tended to increase in Upper and Middle Missouri River paralleling stocking efforts, whereas no evidence of an increasing relative abundance was found in the Lower Missouri River despite stocking.

  15. Lake Habitat and Fish Surveys on Interior Alaska National Wildlife Refuges, 1984–1986

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — A large-scale lake study on Interior Alaska National Wildlife Refuges (NWR) was undertaken from 1984–1986. Six NWRs were surveyed (Innoko, Kanuti, Koyukuk, Nowitna,...

  16. Linking ecoregions, watersheds, and stream habitats with fish: A broad assessment of ecological patterns and integrity

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — It is important for scientists in, and managers of, natural resources to have an ecosystem classification that allows meaningful study and management of large...

  17. Vulnerabilities to Climate Change of Northeast Fish and Wildlife Habitats, Phase II

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This project will build off a first phase of work funded by Northeast states through the Regional Conservation Needs program. Vulnerability to climate change of...

  18. Habitat characteristics and environmental parameters influencing fish assemblages of karstic pools in southern Mexico

    OpenAIRE

    María Eugenia Vega-Cendejas; Mirella Hernandez de Santillana; Steven Norris

    2013-01-01

    Fish assemblage structure was evaluated and compared among 36 karstic pools located within protected areas of the Calakmul Biosphere Reserve (southern Mexico) and unprotected adjacent areas beyond the Reserve. Nonmetric multidimensional scaling (MDS), indicator species analysis (ISA), and canonical correspondence analysis (CCA) were used to identify which environmental factors reflected local influences and to evaluate the correlation of these variables with fish assemblages structure. Thirty...

  19. Predicting the future distribution of Polar Bear Habitat in the polar basin from resource selection functions applied to 21st century general circulation model projections of sea ice

    Science.gov (United States)

    Durner, George M.; Douglas, David C.; Nielson, Ryan M.; Amstrup, Steven C.; McDonald, Trent L.

    2007-01-01

    Predictions of polar bear (Ursus maritimus) habitat distribution in the Arctic polar basin during the 21st century were developed to help understand the likely consequences of anticipated sea ice reductions on polar bear populations. We used location data from satellite-collared polar bears and environmental data (e.g., bathymetry, coastlines, and sea ice) collected between 1985–1995 to build habitat use models called Resource Selection Functions (RSF). The RSFs described habitats polar bears preferred in each of four seasons: summer (ice minimum), autumn (growth), winter (ice maximum) and spring (melt). When applied to the model source data and to independent data (1996–2006), the RSFs consistently identified habitats most frequently used by polar bears. We applied the RSFs to monthly maps of 21st century sea ice concentration predicted by 10 general circulation models (GCM) described in the International Panel of Climate Change Fourth Assessment Report. The 10 GCMs we used had high concordance between their simulations of 20th century summer sea ice extent and the actual ice extent derived from passive microwave satellite observations. Predictions of the amount and rate of change in polar bear habitat varied among GCMs, but all GCMs predicted net habitat losses in the polar basin during the 21st century. Projected losses in the highest-valued RSF habitat (optimal habitat) were greatest in the peripheral seas of the polar basin, especially the Chukchi Sea and Barents Sea. Losses were least in high-latitude regions where RSFs predicted an initial increase in optimal habitat followed by a modest decline. The largest seasonal reductions in habitat were predicted for spring and summer. Average area of optimal polar bear habitat during summer in the polar basin declined from an observed 1.0 million km2 in 1985–1995 (baseline) to a projected multi-model average of 0.58 million km2 in 2045–2054 (-42% change), 0.36 million km2 in 2070–2079 (-64% change), and 0

  20. Fishing resources in the rio Cuiabá basin, Pantanal do Mato Grosso, Brazil

    Directory of Open Access Journals (Sweden)

    Lúcia. A. F. Mateus

    2004-12-01

    Full Text Available The rio Cuiabá is one of the most important tributaries of the upper rio Paraguay basin that form the Pantanal wetlands. The fishing resources of the rio Cuiabá basin were studied based on landing data obtained from the Fish Market of the city of Cuiabá, State of Mato grosso, Brazil. A description is given of the composition and origin of the 2000 and 2001 catch. The rio Cuiabá is the main source of fish for Cuiabá, although some fish sold locally comes from the rio Paraguay. The 2000-2001 catch consisted mainly of migratory species. The main landed species were the pimelodids pintado -Pseudoplatystoma corruscans, cachara -Pseudoplatystoma fasciatum, and jaú -Paulicea luetkeni, and the characiforms pacu -Piaractus mesopotamicus, piraputanga -Brycon microlepis, piavuçu -Leporinus macrocephalus, and dourado -Salminus brasiliensis. Large catfishes (Pimelodidae represented 70% of the landed fish, among which pintado was the most abundant. The data indicate that current catches are smaller than those recorded in the early 1980s and fish are caught far off the urban zone. Moreover, although the number and composition of species caught were similar to those of the 80s, the distribution of species abundance has changed. Currently, fisheries catch more carnivorous species than fish from lower trophic levels. These findings cannot be credited solely to overfishing, but appear to result from a complex interaction of factors, i.e., environmental degradation, changes in market preferences, and restrictive legal fishing regulations.O recurso pesqueiro da bacia do rio Cuiabá, um dos mais importantes tributários da bacia do Alto Paraguai, formadora do Pantanal, foi estudado a partir dos dados de desembarque de pescado obtidos no Mercado do Porto de Cuiabá, Mato Grosso, Brasil. São descritas a composição e procedência das capturas para os anos de 2000 e 2001. O rio Cuiabá é a fonte dominante de pescado para a cidade de Cuiabá, mas uma parte do

  1. Assessment of Present Anadromous Fish Production Facilities in the Columbia River Basin, Idaho Department of Fish and Game Hatcheries, Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Delarm, Michael R.; Smith, Robert Z.

    1990-07-01

    The goal of this report is to document current production practices for hatcheries which rear anadromous fish in the Columbia River Basin and to identify those facilities where production can be increased. A total of 85 hatchery and satellite facilities operated by the Idaho Department of Fish and Game, Oregon Department of Fish and Game, US Fish and Wildlife Service, Washington Department of Wildlife, and Washington Department of Fisheries were evaluated. The years 1985 to 1987 were used in this evaluation. During those years, releases averaged 143,306,596 smolts weighing 7,693,589 pounds. A total of 48 hatchery or satellite facilities were identified as having expansion capability. They were estimated to have the potential for increasing production by an 84,448,000 smolts weighting 4,853,306 pounds. 2 refs., 25 figs.

  2. A summary of 22 Years of Fish Screen Evaluation in the Yakima River Basin, Summary Report 1985-2007.

    Energy Technology Data Exchange (ETDEWEB)

    Chamness, Mickie A. [Pacific Northwest National Laboratory

    2007-12-03

    Sixty fish screen facilities were constructed in the Yakima River basin between 1985 and 2006 as part of the Northwest Power and Conservation Council plan to mitigate the effects of federal hydroelectric projects on fish and wildlife populations. This report summarizes evaluations of some of those and other fish screen facilities conducted by Pacific Northwest National Laboratory (PNNL) from 1985 through 2006. The objective of these studies was to determine if the newly designed and constructed fish screens were effective at providing juvenile salmonids safe passage past irrigation diversions. To answer that question, PNNL conducted release-and-catch studies at eight Phase I sites in the Yakima River basin. Increasing concerns about the impacts of hatchery fish releases on the wild fish population, as well as the cost and time necessary to perform these kinds of biological studies at more than 60 planned Phase II sites, required development of techniques to evaluate the effectiveness of the sites without releasing fish. The new techniques involved collecting information on screen design, operation, and effectiveness at guiding fish safely through the fish screen facility. Performance measures including water velocities and passage conditions provide a good alternative to biological studies at significantly lower cost and time. Physical techniques were used at all 10 Phase I and 28 Phase II sites evaluated by PNNL over the following 19 years. Results of these studies indicate the Phase I and II fish screen facilities are designed and capable of providing safe passage for juvenile salmonids so long as construction, maintenance, and operations meet the criteria used in the design of each site and the National Marine Fisheries Service criteria for juvenile fish screen design.

  3. Effects of exploitation, environmental changes, and new species on the fish habitats and resources of Lake Erie

    Science.gov (United States)

    Hartman, Wilbur L.

    1973-01-01

    No other lake as large as Lake Erie (surface area, 25,690 km2) has been subjected to such extensive changes in the drainage basin, the lake environment, and the fish populations over the last 150 years. Deforestation and prairie burning led to erosion of the watershed and siltation of valuable spawning grounds. Marsh spawning areas were drained. Lake-to-river spawning migrations of sturgeon, walleye, and other fishes were blocked by mill dams. Accelerated cultural nutrient loading increased total dissolved solids by nearly 50% (1920-70). Phosphate loading reached 469 metric tons per year by the 1950's and continued to increase. The biomass of phytoplankton increased 20-fold between 1919 and 1963. Oxygen demand for decomposition of these algae so degraded oxygen regimes in the western and central basins by the 1950's that the once abundant mayfly nymphs were destroyed and the central basin hypolimnion became anoxic. The sequence of disappearance or severe depletion of fish species was as follows: lake trout, sturgeon, lake herring, lake whitefish, sauger, blue pike, and walleye. Yellow perch are now declining. All resources were intensively exploited at one time or another. Lake trout suffered only this stress, but changes in the watershed significantly stressed sturgeon and lake whitefish. Degradation of the lake spawning grounds, benthos, and oxygen regimes culminated in severe stress by the 1950's on the remnants of the lake herring and lake whitefish, and on the sauger, blue pike, and walleye. Additional mortality may have been imposed on walleye and blue pike fry by predacious smelt that successfully colonized Lake Erie after first appearing in 1932. The cultural stresses, in the probable order of greatest to least net effects on the fish community of Lake Erie, appear to have been: (1) an intense, opportunistic, ineffectively controlled commercial fishery; (2) changes in the watershed, such as erosion and siltation of stream beds and inshore lake areas, and

  4. Poor transferability of species distribution models for a pelagic predator, the grey petrel, indicates contrasting habitat preferences across ocean basins.

    Directory of Open Access Journals (Sweden)

    Leigh G Torres

    Full Text Available Species distribution models (SDMs are increasingly applied in conservation management to predict suitable habitat for poorly known populations. High predictive performance of SDMs is evident in validations performed within the model calibration area (interpolation, but few studies have assessed SDM transferability to novel areas (extrapolation, particularly across large spatial scales or pelagic ecosystems. We performed rigorous SDM validation tests on distribution data from three populations of a long-ranging marine predator, the grey petrel Procellaria cinerea, to assess model transferability across the Southern Hemisphere (25-65°S. Oceanographic data were combined with tracks of grey petrels from two remote sub-Antarctic islands (Antipodes and Kerguelen using boosted regression trees to generate three SDMs: one for each island population, and a combined model. The predictive performance of these models was assessed using withheld tracking data from within the model calibration areas (interpolation, and from a third population, Marion Island (extrapolation. Predictive performance was assessed using k-fold cross validation and point biserial correlation. The two population-specific SDMs included the same predictor variables and suggested birds responded to the same broad-scale oceanographic influences. However, all model validation tests, including of the combined model, determined strong interpolation but weak extrapolation capabilities. These results indicate that habitat use reflects both its availability and bird preferences, such that the realized distribution patterns differ for each population. The spatial predictions by the three SDMs were compared with tracking data and fishing effort to demonstrate the conservation pitfalls of extrapolating SDMs outside calibration regions. This exercise revealed that SDM predictions would have led to an underestimate of overlap with fishing effort and potentially misinformed bycatch mitigation

  5. Chaos and regular dynamics in model multi-habitat plankton–fish communities

    Indian Academy of Sciences (India)

    A B Medvinsky; S V Petrovskii; I A Tikhonova; E Venturino; H Malchow

    2001-03-01

    This work is focused on the role of diffusive interaction between separate habitats in a patchy environment in plankton pattern formation. We demonstrate that conceptual reaction—diffusion mathematical models constitute an appropriate tool for searching and understanding basic mechanisms of plankton pattern formation and complex spatio-temporal plankton dynamics.

  6. Geographic coupling of juvenile and adult habitat shapes spatial population dynamics of a coral reef fish

    NARCIS (Netherlands)

    Huijbers, C.M.; Nagelekerken, I.; Debrot, A.O.; Jongejans, E.

    2013-01-01

    Marine spatial population dynamics are often addressed with a focus on larval dispersal, without taking into account movement behavior of individuals in later life stages. Processes occurring during demersal life stages may also drive spatial population dynamics if habitat quality is perceived diffe

  7. Comparative analysis of different survey methods for monitoring fish assemblages in coastal habitats

    Science.gov (United States)

    Baker, Duncan G.L.; McIver, Reba; Schmidt, Allison L.; Thériault, Marie-Hélène; Boudreau, Monica; Courtenay, Simon C.; Lotze, Heike K.

    2016-01-01

    Coastal ecosystems are among the most productive yet increasingly threatened marine ecosystems worldwide. Particularly vegetated habitats, such as eelgrass (Zostera marina) beds, play important roles in providing key spawning, nursery and foraging habitats for a wide range of fauna. To properly assess changes in coastal ecosystems and manage these critical habitats, it is essential to develop sound monitoring programs for foundation species and associated assemblages. Several survey methods exist, thus understanding how different methods perform is important for survey selection. We compared two common methods for surveying macrofaunal assemblages: beach seine netting and underwater visual census (UVC). We also tested whether assemblages in shallow nearshore habitats commonly sampled by beach seines are similar to those of nearby eelgrass beds often sampled by UVC. Among five estuaries along the Southern Gulf of St. Lawrence, Canada, our results suggest that the two survey methods yield comparable results for species richness, diversity and evenness, yet beach seines yield significantly higher abundance and different species composition. However, sampling nearshore assemblages does not represent those in eelgrass beds despite considerable overlap and close proximity. These results have important implications for how and where macrofaunal assemblages are monitored in coastal ecosystems. Ideally, multiple survey methods and locations should be combined to complement each other in assessing the entire assemblage and full range of changes in coastal ecosystems, thereby better informing coastal zone management. PMID:27018396

  8. 50 CFR 17.95 - Critical habitat-fish and wildlife.

    Science.gov (United States)

    2010-10-01

    ..., secondary, ravine, swamp, agricultural, and coastal forests composed of native or introduced plant species... were created on a base of USGS digital ortho-photo quarter-quadrangles, and critical habitat units were... scale digital ortho-photo quarter-quadrangles: Acme SE; Acme SW; Big Bend NE; Big Bend NW; Big Bend...

  9. Comparative analysis of different survey methods for monitoring fish assemblages in coastal habitats.

    Science.gov (United States)

    Baker, Duncan G L; Eddy, Tyler D; McIver, Reba; Schmidt, Allison L; Thériault, Marie-Hélène; Boudreau, Monica; Courtenay, Simon C; Lotze, Heike K

    2016-01-01

    Coastal ecosystems are among the most productive yet increasingly threatened marine ecosystems worldwide. Particularly vegetated habitats, such as eelgrass (Zostera marina) beds, play important roles in providing key spawning, nursery and foraging habitats for a wide range of fauna. To properly assess changes in coastal ecosystems and manage these critical habitats, it is essential to develop sound monitoring programs for foundation species and associated assemblages. Several survey methods exist, thus understanding how different methods perform is important for survey selection. We compared two common methods for surveying macrofaunal assemblages: beach seine netting and underwater visual census (UVC). We also tested whether assemblages in shallow nearshore habitats commonly sampled by beach seines are similar to those of nearby eelgrass beds often sampled by UVC. Among five estuaries along the Southern Gulf of St. Lawrence, Canada, our results suggest that the two survey methods yield comparable results for species richness, diversity and evenness, yet beach seines yield significantly higher abundance and different species composition. However, sampling nearshore assemblages does not represent those in eelgrass beds despite considerable overlap and close proximity. These results have important implications for how and where macrofaunal assemblages are monitored in coastal ecosystems. Ideally, multiple survey methods and locations should be combined to complement each other in assessing the entire assemblage and full range of changes in coastal ecosystems, thereby better informing coastal zone management.

  10. Beaver dams maintain fish biodiversity by increasing habitat heterogeneity throughout a low-gradient stream network

    Science.gov (United States)

    Smith, Joseph M.; Mather, Martha E.

    2013-01-01

    Understanding the relationship between heterogeneity and biodiversity is an active focus of ecological research. Although habitat heterogeneity is conceptually linked to biodiversity, the amount and configuration of heterogeneity that maintains biodiversity within ecosystems is not well understood, especially for an entire stream network.

  11. Predation, habitat complexity, and variation in density-dependent mortality of temperate reef fishes.

    Science.gov (United States)

    Johnson, Darren W

    2006-05-01

    Density dependence in demographic rates can strongly affect the dynamics of populations. However, the mechanisms generating density dependence (e.g., predation) are also dynamic processes and may be influenced by local conditions. Understanding the manner in which local habitat features affect the occurrence and/or strength of density dependence will increase our understanding of population dynamics in heterogeneous environments. In this study I conducted two separate field experiments to investigate how local predator density and habitat complexity affect the occurrence and form of density-dependent mortality of juvenile rockfishes (Sebastes spp.). I also used yearly censuses of rockfish populations on nearshore reefs throughout central California to evaluate mortality of juvenile rockfish at large spatial scales. Manipulations of predators (juvenile bocaccio, S. paucispinus) and prey (kelp, gopher, and black-and-yellow [KGB] rockfish, Sebastes spp.) demonstrated that increasing the density of predators altered their functional response and thus altered patterns of density dependence in mortality of their prey. At low densities of predators, the number of prey consumed per predator was a decelerating function, and mortality of prey was inversely density dependent. However, at high densities of predators, the number of prey killed per predator became an accelerating response, and prey mortality was directly density dependent. Results of field experiments and large-scale surveys both indicated that the strength of density-dependent mortality may also be affected by the structural complexity of the habitat. In small-scale field experiments, increased habitat complexity increased the strength of density-dependent mortality. However, at large scales, increasing complexity resulted in a decrease in the strength of density dependence. I suggest that these differences resulted from scale-dependent changes in the predatory response that generated mortality. Whether

  12. Three-dimensional distribution of larval fish habitats in the shallow oxygen minimum zone in the eastern tropical Pacific Ocean off Mexico

    Science.gov (United States)

    Davies, S. M.; Sánchez-Velasco, L.; Beier, E.; Godínez, Victor M.; Barton, Eric D.; Tamayo, A.

    2015-07-01

    Three-dimensional distribution of larval fish habitats was analyzed, from the upper limit of the shallow oxygen minimum zone (~0.2 mL/L) to the sea surface, in the eastern tropical Pacific Ocean off Mexico in February 2010. The upper limit rises from ~250 m depth in the entrance of the Gulf of California to ~80 m depth off Cabo Corrientes. Three larval fish habitats were defined statistically: (i) a Gulf of California habitat dominated by Anchoa spp. larvae (epipelagic species), constrained to the oxygenated surface layer (>3.5 mL/L) in and above the thermocline (~60 m depth), and separated by a salinity front from the Tropical Pacific habitat; (ii) a Tropical Pacific habitat, dominated by Vinciguerria lucetia larvae (mesopelagic species), located throughout the sampled water column, but with the highest abundance in the oxygenated upper layer above the thermocline; (iii) an Oxygen Minimum habitat defined mostly below the thermocline in hypoxic (tropical Pacific off Mexico, the shallow hypoxic water does not have dramatic effects on the total larval fish abundance but appears to affect species composition.

  13. Spatial gradients in freshwater fish diversity, abundance and current pattern in the Himalayan region of Upper Ganges Basin, India

    Directory of Open Access Journals (Sweden)

    AJEY KUMAR PATHAK

    2014-10-01

    Full Text Available Pathak AK, Sarkar UK, Singh SP. 2014. Spatial gradients in freshwater fish diversity, abundance and current pattern in the Himalayan region of Upper Ganges Basin, India. Biodiversitas 15: 186-194.The present study describes the analysis and mapping of the different measurements of freshwater fish biodiversity of the Upper Ganges basin in the Himalayan region using spatial interpolation methods of Geographical Information System. The diversity, richness and abundance of fishes for each sampling location were determined and Kriging interpolation was applied on each fisheries measurement to predict and produce semivariogram. The semivariogarms produced were cross validated and reclassified. The reclassified maps for richness, abundance and diversity of fishes, occurrence of cold water threatened fish and abundance of important genera like Tor, Schziothorax and species were produced. The result of the Kriging produced good results and overall error in the estimation process was found significant. The cross validation of semovariograms also provided a better result with the observed data sets. Moreover, weighted overlay analysis of the reclassified raster maps of richness and abundance of fishes produced the classified raster map at different evaluation scale (0-10 qualitatively describing the gradient of species richness and abundance compositely. Similarly, the classified raster map at same evaluation scale qualitatively describing the gradient of species abundance and diversity compositely was produced and published. Further, basin wise analysis between Alaknanda/Pindar and Ganga1 sub basins showed 0.745 disparities at 0.745 distances in 2 dimensional spaces. The richness, diversity and abundance of threatened fishes among the different sampling locations were not significant (p = 0.9.

  14. From crypsis to mimicry: changes in colour and the configuration of the visual system during ontogenetic habitat transitions in a coral reef fish.

    Science.gov (United States)

    Cortesi, Fabio; Musilová, Zuzana; Stieb, Sara M; Hart, Nathan S; Siebeck, Ulrike E; Cheney, Karen L; Salzburger, Walter; Marshall, N Justin

    2016-08-15

    Animals often change their habitat throughout ontogeny; yet, the triggers for habitat transitions and how these correlate with developmental changes - e.g. physiological, morphological and behavioural - remain largely unknown. Here, we investigated how ontogenetic changes in body coloration and of the visual system relate to habitat transitions in a coral reef fish. Adult dusky dottybacks, Pseudochromis fuscus, are aggressive mimics that change colour to imitate various fishes in their surroundings; however, little is known about the early life stages of this fish. Using a developmental time series in combination with the examination of wild-caught specimens, we revealed that dottybacks change colour twice during development: (i) nearly translucent cryptic pelagic larvae change to a grey camouflage coloration when settling on coral reefs; and (ii) juveniles change to mimic yellow- or brown-coloured fishes when reaching a size capable of consuming juvenile fish prey. Moreover, microspectrophotometric (MSP) and quantitative real-time PCR (qRT-PCR) experiments show developmental changes of the dottyback visual system, including the use of a novel adult-specific visual gene (RH2 opsin). This gene is likely to be co-expressed with other visual pigments to form broad spectral sensitivities that cover the medium-wavelength part of the visible spectrum. Surprisingly, the visual modifications precede changes in habitat and colour, possibly because dottybacks need to first acquire the appropriate visual performance before transitioning into novel life stages. PMID:27307489

  15. Ecological relations between fish assemblages and their habitats in the Elbe River (ELFI). Final report; Oekologische Zusammenhaenge zwischen Fischgemeinschafts- und Lebensraumstrukturen der Elbe (ELFI). Abschlussbericht

    Energy Technology Data Exchange (ETDEWEB)

    Nellen, W.; Kausch, H.; Thiel, R.; Ginter, R. (eds.)

    2002-12-01

    In the framework of the joint project, extensive data were obtained with regard to ecomorphology and hydro-dynamics of fish habitats, species diversity, age structure, abundance, habitat quality, habitat use, larval drift, migrations, growth, health status and population genetics of the fish fauna of the middle Elbe River. The data were stored in data banks and were used as basis to assess the middle Elbe River, to formulate a fish-ecological guiding view, and to develop predictive habitat models for different life stages of indicatory fish species. The data and results of the joint project will be stored in fish data banks of the ARGE Elbe and of the Federal Institute of Hydrology. The information is useful for the development of decision support systems. (orig.) [German] Im Rahmen des Verbundprojekts wurden umfangreiche Daten zu Oekomorphologie und Hydrodynamik von Fischhabitaten, zu Artendiversitaet, Altersstruktur, Abundanz, Habitatqualitaet und -nutzung, Larvendrift, Wanderungen, Wachstum, Gesundheitsstatus und Populationsgenetik der Fischfauna in der Mittelelbe erhoben und in Datenbanken abgelegt. Darauf aufbauend wurde die Mittelelbe fischoekologisch bewertet, ein fischoekologisches Leitbild formuliert und prognosefaehige Habitatmodelle fuer verschiedene Lebensstadien von Indikatorfischarten entwickelt. Die Daten und Ergebnisse des Verbundprojekts fliessen in die Fischdatenbanken der ARGE Elbe und der Bundesanstalt fuer Gewaesserkunde ein und stehen fuer die Entwicklung von DSS (Decision Support Systems) zur Verfuegung. (orig.)

  16. Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan for Fiscal Year 1987-1988.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration; Northwest Power Planning Council (U.S.); Columbia Basin Fish and Wildlife Authority

    1987-10-01

    The Columbia River Basin Fish and Wildlife Program (Program) was developed by the Northwest Power Planning Council (Council) in accordance with Public Law 96-501, the Pacific Northwest Electric Power Planning and Conservation Act (Act). The purpose of the Program is to guide Bonneville Power Administration (BPA) in carrying out our responsibility to protect, mitigate, and enhance fish and wildlife of the Columbia River Basin. The Act explicitly gave BPA the authority and responsibility to use the BPA fund for these ends, to the extent that fish and wildlife were affected by the development and operation of hydroelectric generation in the Columbia River Basin. This document presents BPA's plans for Program implementation during Fiscal Year (FY) 1988. BPA's Columbia River Basin Fish and Wildlife Program Work Plan (Work Plan) reflects the primary goals of the Program's Action Plan: to provide a solid, timely, and focused basis for budgeting and planning. Additionally, BPA's Work Plan provides a means to judge progress and the success of Program implementation. This Work Plan has been organized and written to meet the specific needs of the Council's Action Plan, as described in Action Items 10.1-10.3. It includes schedules with key milestones for FY 1988 through FY 1990. The Work Plan is organized to address the Action Items assigned to BPA in Section 1400 of the 1987 Program.

  17. Use of Fixed and Mobile Acoustic Telemetry Systems to Understand Fish Responses to Habitat Variability in a Large River (Rhône, France)

    OpenAIRE

    Capra, Hervé; Pella, Hervé; Ovidio, Michaël; McNeil, Eric; Bergé, Julien; Oriol, Eric

    2011-01-01

    The presentation would summarize the advantages and limitations of both fixed and mobile acoustic telemetry equipment deployed in a fast flowing large river : the Rhône river (France). The objectives were to describe fish behavior in term of fish movements as responses to habitat variability due to the production of peaking electricity and temperature heterogeneity (natural or due to a nuclear power plant release). At a local scale we used a fixed automatic acoustic telemetry system to rec...

  18. Determining Adult Pacific Lamprey Abundance and Spawning Habitat in the Lower Deschutes River Sub-Basin, Oregon, 2008 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Fox, Matt; Graham, Jennifer C. [Confederated Tribes of the Warm Springs Reservation, Oregon

    2009-04-30

    An adult Pacific lamprey (Lampetra tridentata) escapement estimate was generated in the lower Deschutes River during run year 2008. This included a mark-recapture study to determine adult abundance and a tribal subsistence creel. Fish measuring less than 10.5 cm received two marks for the mark-recapture estimate while those measuring greater than 10.5 cm were surgically implanted with radio transmitters to monitor migration upstream of Sherars Falls (rkm 70.4). Radio telemetry was used to determine habitat, focal spawning areas and spawn timing. All fish were collected at the Sherars Falls fish ladder from July-October 2008 using a long handled dip-net. Escapement was generated using a two event mark-recapture experiment. Adult lamprey populations were estimated at 3,471 (95% CI = 2,384-5,041; M = 101; C = 885 R = 25) using Chapman's modification of the Peterson estimate. The relative precision around the estimate was 31.42. Tribal harvest was approximately 806 adult lamprey (95% CI = +/- 74) with a total escapement of 2,669. Fourteen lamprey received radio tags and were released at Lower Blue Hole recreation site (rkm 77.3). Movement was recorded by mobile, fixed site and aerial telemetry methods. Upstream movements of lamprey were documented from July through December 2008 with most lamprey over-wintering in the mainstem Deschutes River.

  19. The petroleum habitat in the post-rift sequences in the Brazilian sedimentary basins

    Energy Technology Data Exchange (ETDEWEB)

    De Figueiredo, A.M.F.D.; Fernandes, G.J.F.; Guimaraes, P.T.M. (Petrobras, Rio de Janeiro (Brazil))

    1991-03-01

    The post-rift sedimentary strata of the Brazilian coastal basins are made of two main sequences: the evaporite and carbonatic Albian-Aptian sequence, and the open-marine Late Albian to Recent sequence, both related to the opening of the South Atlantic Ocean. More than 40 billion barrels of oil-equivalent in place has been found in these sequences, mostly in siliciclastic reservoirs above and below the Aptian salt beds. The productive basins are Campos, Espirito Santo, Sergipe-Alagoas, Potiguar, Ceara, and Santos, but the first one is responsible for more than 60% of the original oil in place discovered in these basins. The hydrocarbon origin, migration, and accumulation models in these sequences are discussed and exemplified by some giant oil fields of Campos and Sergipe-Alagoas basins, where oil is trapped in Aptian conglomerates, Albian carbonates, and Upper Cretaceous to Tertiary turbidite sandstones. The cumulative production in these sequences reaches 958.6 million barrels and the proved exploitable reserve amounts reach 2.7 billion barrels of oil-equivalent. Petrobras' exploratory forecast indicates that the post-rift sequences are the most prolific ones in the Brazilian marginal basins. The oil-equivalent that is expected to be discovered, particularly in deep water areas, where giant oil fields (as the Marlim field) have been found, exceeds the amount that has been discovered until now.

  20. Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan for Fiscal Year 1990.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration; Northwest Power Planning Council (U.S.); Columbia Basin Fish and Wildlife Authority

    1990-01-01

    The Columbia River Basin Fish and Wildlife Program (Program) was developed by the Northwest Power Planning Council (Council) in accordance with Public Law 96-501, the Pacific Northwest Electric Power Planning and Conservation Act (Act). The purpose of the Program is to guide the Bonneville Power Administration (BPA) and other Federal agencies in carrying out their responsibilities to protect, mitigate, and enhance fish and wildlife of the Columbia River Basin. The Act explicitly gives BPA the authority and responsibility to use the BPA fund for these ends, to the extent that fish and wildlife are affected by the development and operation of hydroelectric generation in the Columbia River Basin. This document presents BPA's plans for implementing the Program during Fiscal Year (FY) 1990. The Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan (AIWP) reflects the primary goals of the Council's Action Plan (Section 1400 of the Program): to provide a solid, timely, and focused basis for budgeting and planning. In addition, the AIWP provides a means to judge progress and the success of Program implementation. The FY 1990 AIWP also follows the outline developed by the Policy Review Group (PRG) during Step 1 of initial cycle of the Implementation Planning Process (IPP), which is described in Section III. A number of new FY 1990 projects were still under review by the PRG as the AIWP went to press. These projects have been noted in Table 2, New FY 1990 Program Projects, and in the text of the AIWP. This AIWP has been organized and written to meet the specific needs of Program Action Items 10.1-10.3. The AIWP includes schedules with key milestones for FY 1990 and beyond, and addresses the Action Items assigned to BPA in Section 1400 of the 1987 Program. All BPA-funded Program projects discussed in the FY 1990 AIWP are listed in Tables 1 and 2 according to their status as of September 30, 1989. Table 1 (pp. 3-14) lists completed, ongoing

  1. Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan for Fiscal Year 1992.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration; Northwest Power Planning Council (U.S.); Columbia Basin Fish and Wildlife Authority

    1991-09-01

    The Columbia River Basin Fish and Wildlife Program (Program) was developed by the Northwest Power Planning Council (Council) in accordance with Public Law 96-501, the Pacific Northwest Electric Power Planning and Conservation Act (Act). The purpose of the Program is to guide the Bonneville Power Administration (BPA) and other Federal agencies in carrying out their responsibilities to protect, mitigate, and enhance fish and wildlife of the Columbia River Basin. The Act explicitly gives BPA the authority and responsibility to use the BPA fund for these ends, to the extent that fish and wildlife are affected by the development and operation of hydroelectric generation in the Columbia River Basin. The Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan (AIWP) presents BPA's plans for implementing the Program during Fiscal Year (FY) 1992. The AIWP reflects the primary goals of the Council's Action Plan (Section 1400 of the Program): to provide a solid, timely, and focused basis for budgeting and planning. In addition, the AIWP provides a means to judge the progress and the success of Program implementation. The AIWP is based on the outline developed by the Policy Review Group (PRG) during Step 1 of the annual cycle of the Implementation Planning Process (IPP), which is described in Section III. This AIWP has been organized and written to meet the specific needs of Program Action Items 10.1-10.3. The AIWP includes schedules with key milestones for FY 1992 and beyond, and addresses the Action Items assigned to BPA in Section 1400 of the 1987 Program and in subsequent amendments. All Program projects discussed in the AIWP are listed in Tables 1 and 2 according to their status as of May 21, 1991. Table 1 (pp. 3-14) lists completed, ongoing, and deferred projects. Table 2 (pp. 15-16) lists FY 1992 new-start projects. ''Ongoing'' status indicates that the project started in FY 1991 or before and that it is expected to

  2. Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan for Fiscal Year 1991.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration; Northwest Power Planning Council (U.S.); Columbia Basin Fish and Wildlife Authority

    1990-09-01

    The Columbia River Basin Fish and Wildlife Program (Program) was developed by the Northwest Power Planning Council (Council) in accordance with Public Law 96-501, the Pacific Northwest Electric Power Planning and Conservation Act (Act). The purpose of the Program is to guide the Bonneville Power Administration (BPA) and other Federal agencies in carrying out their responsibilities to protect, mitigate, and enhance fish and wildlife of the Columbia River Basin. The Act explicitly gives BPA the authority and responsibility to use the BPA fund for these ends, to the extent that fish and wildlife are affected by the development and operation of hydroelectric generation in the Columbia River Basin. The Columbia River Basin Fish and Wildlife Program Annual Implementation Work Plan (AIWP) presents BPA's draft plans for implementing the Program during Fiscal Year (FY) 1991. The AIWP reflects the primary goals of the Council's Action Plan (Section 1400 of the Program): to provide a solid, timely, and focused basis for budgeting and planning. In addition, the AIWP provides a means to judge the progress and the success of Program implementation. The AIWP is based on the outline developed by the Policy Review Group (PRG) during Step 1 of the annual cycle of the Implementation Planning Process (IPP), which is described in Section III. This AIWP has been organized and written to meet the specific needs of Program Items 10.1-10.3. The AIWP includes schedules with key milestones for 1 and beyond, and addresses the Action Items assigned to BPA in Section 1400 of the 1987 Program and in subsequent amendments. All Program projects discussed in the AIWP are listed in Tables 1 and 2 according to their status as of September 1, 1990. Table 1 (pp. 3-14) lists completed, ongoing, and deferred projects. Table 2 (pp. 15-17) lists FY 1991 new-start projects. ''Ongoing'' status indicates that the project started in FY 1990 or before and that it is expected to

  3. Chromosomal diversity in three species of electric fish (Apteronotidae, Gymnotiformes) from the Amazon Basin.

    Science.gov (United States)

    Silva, Fernando Henrique Ramos; Pieczarka, Julio Cesar; Cardoso, Adauto Lima; da Silva, Patrícia Corrêa; de Oliveira, Jonas Alves; Nagamachi, Cleusa Yoshiko

    2014-10-01

    Cytogenetic studies were carried out on samples of Parapteronotus hasemani, Sternarchogiton preto and Sternarchorhamphus muelleri (Apteronotidae, Gymnotiformes) from the Amazon basin. The first two species exhibited both a 2n = 52 karyotype, but differed in their karyotypic formulae, distribution of constitutive heterochromatin, and chromosomal location of the NOR. The third species, Sternarchorhamphus muelleri, was found to have a 2n = 32 karyotype. In all three species the DAPI and chromomycin A3 staining results were consistent with the C-banding results and nucleolar organizer region (NOR) localization. The 18S rDNA probe confirmed that there was only one pair of ribosomal DNA cistron bearers per species. The telomeric probe did not reveal interstitial telomeric sequences (ITS). The karyotypic differences among these species can be used for taxonomic identification. These data will be useful in future studies of these fishes and help understanding the phylogenetic relationships and chromosomal evolution of the Apteronotidae.

  4. Columbia River Basin Fish and Wildlife Program Work Plan for Fiscal Year 1989.

    Energy Technology Data Exchange (ETDEWEB)

    United States. Bonneville Power Administration. Division of Fish and Wildlife.

    1988-11-01

    The FY 1989 Columbia River Basin Fish and Wildlife Program Work Plan (Work Plan) presents Bonneville Power Administration's plans for implementing the Columbia River Basin Fish and Wildlife Program (Program) in FY 1989. The Work Plan focuses on individual Action Items found in the 1987 Program for which Bonneville Power Administration (BPA) has determined that it has authority and responsibility to implement. Each of the entries in the Work Plan includes objectives, background, and progress to date in achieving those objectives, and a summary of plans for implementation in FY 1989. Most Action Items are implemented through one or more BPA-funded projects. Each Action Item entry is followed by a list of completed, ongoing, and planned projects, along with objectives, results, schedules, and milestones for each project. The FY 1989 Work Plan emphasizes continuation of 113 projects, most of which involve protection, mitigation, or enhancement of anadromous fishery resources. BPA also plans to start 20 new projects in FY 1989. The number of ongoing FY 1988 projects to be continued in FY 1989 and the number of new projects planned to start in FY 1989 are based on current (September 7, 1988) procurement expectations. Several projects presently in BPA's procurement process are expected to be contracted by September 30, 1988, the last day of FY 1988. Although these projects have not yet started, they have been listed in the Work Plan as ongoing FY 1988 projects, based on projected start dates in late September 1988. Throughout the Work Plan, those projects with projected start dates in September 1988 have been noted.

  5. Sensitive Habitats and fishing footprint off Canary Islands seamounts Amanay and El Banquete

    OpenAIRE

    Martín-Sosa, P. (Pablo); González-Porto, M. (Marcos); Almón-Pazos, B. (Bruno); Acosta-Díaz, C. (Carolina); Arrese-González, B. (Beatriz); González-Irusta, José Manuel; Barreiro-Jueguen, S. (Santiago); Jiménez, S.

    2014-01-01

    The main objective of the LIFE+ INDEMARES project is to contribute to the protection and sustainable use of the biodiversity in the Spanish seas through the identification of valuable areas for the Natura 2000 Network. The Spanish Institute of Oceanography (IEO) has been in charge of implementing scientific surveys to map sensitive habitats of seven of the ten INDEMARES areas, and to determine the fisheries footprint over these areas. Sur y Oriente de Fuerteventura y Lanzarote ...

  6. Investigations into the Early History of Naturally Produced Spring Chinook Salmon in the Grand Ronde Basin : Fish Research Project Oregon : Annual Progress Report Project Period September 1, 1996 to August 31, 1997.

    Energy Technology Data Exchange (ETDEWEB)

    Johasson, Brian C.; Tranquilli, J. Vincent; Keefe, MaryLouise

    1998-10-28

    We have documented two general life history strategies utilized by juvenile spring chinook salmon in the Grande Ronde River basin: (1) juveniles migrate downstream out of summer rearing areas in the fall, overwinter in river valley habitats, and begin their seaward migration in the spring, and (2) juveniles remain in summer rearing areas through the winter and begin seaward migration in the spring. In migration year 96-97, the patterns evident from migrant trap data were similar for the three Grande Ronde River populations studied, with 42% of the Lostine River migrants and 76% of the Catherine Creek migrants leaving upper rearing areas in the fall. Contrary to past years, the majority (98%) of upper Grande Ronde River migrants moved out in the fall. Total trap catch for the upper Grande Ronde River was exceedingly low (29 salmon), indicating that patterns seen this year may be equivocal. As in previous years, approximately 99% of chinook salmon juveniles moved past our trap at the lower end of the Grande Ronde River valley in the spring, reiterating that juvenile chinook salmon overwinter within the Grande Ronde valley section of the river. PIT-tagged fish were recaptured at Grande Ronde River traps and mainstem dams. Recapture data showed that fish that overwintered in valley habitats left as smolts and arrived at Lower Granite Dam earlier than fish that overwintered in upstream rearing areas. Fish from Catherine Creek that overwintered in valley habitats were recaptured at the dams at a higher rate than fish that overwintered upstream. In this first year of data for the Lostine River, fish tagged during the fall migration were detected at a similar rate to fish that overwintered upstream. Abundance estimates for migration year 96-97 were 70 for the upper Grande Ronde River, 4,316 for the Catherine Creek, and 4,323 for the Lostine River populations. Although present in most habitats, juvenile spring chinook salmon were found in the greatest abundance in pool

  7. Suitable habitats for 0-group fish in rehabilitated floodplains along the lower River Rhine

    NARCIS (Netherlands)

    Grift, R.E.; Buijse, A.D.; Densen, van W.L.T.; Machiels, M.A.M.; Kranenbarg, S.; Breteler, J.P.K.; Backx, J.J.G.M.

    2003-01-01

    The suitability of rehabilitated floodplains along the lower River Rhine for rheophilic cyprinids was assessed by investigating the spatial distribution of 0-group fish among, and within, three newly created secondary channels, an oxbow lake reconnected at its downstream end and several existing gro

  8. Habitat associations of fish and aquatic turtles in an East Texas Stream

    Directory of Open Access Journals (Sweden)

    Riedle J.D.

    2016-01-01

    Full Text Available The community structure of stream communities are treated as bioassays of stream ecosystems and changes to species patterns within those communities reflect response to multiple stressors including natural fluctuations in environmental variables. Research has focused on the structure of fish assemblages and there is increasing interest in environmental factors structuring turtle communities. Both fishes and turtles can be sampled using common methods, but are rarely studied together. Our objective was to compare distribution of fish and turtle species based on measured environmental variables in East Texas, USA. Species distributions were influenced by flow, substrate, and emergent vegetation. Results from Monte Carlo permutation tests suggest that downed woody debris and water temperature also had a strong influence on species distributions. Co-correspondence analysis showed considerable overlap of species scores in the absence of environmental variables. The five macrohabitats sampled exhibited varying degrees of connectivity and thus species mixing, which is driven by annual fluctuations in precipitation. Results from this study suggest that turtles and fishes can be considered simultaneously and exhibit similar patterns of species distribution across the landscape, at least at local scales.

  9. THREATENED FISHES OF THE WORLD: Paracobitis rhadinaeus (Regan, 1906 (NEMACHEILIDAE

    Directory of Open Access Journals (Sweden)

    Hamed Mousavi-Sabet

    2013-01-01

    Full Text Available Paracobitis rhadinaeus is an endemic Nemacheiline loach in the Sistan basin, southeast Iran. The population is declining probably due to habitat loss or degradation, damming, drought and poaching. Urgent habitat protection with bans on further regulation of the Hamoun wetland and related reservoirs is suggested. Captive breeding of the fish should be initiated. Fishing activities should be forbidden or limited. A detailed study of current population status, biology and ecology of P. rhadinaeus is required.

  10. Unique evolutionary trajectories in repeated adaptation to hydrogen sulphide-toxic habitats of a neotropical fish (Poecilia mexicana).

    Science.gov (United States)

    Pfenninger, Markus; Patel, Simit; Arias-Rodriguez, Lenin; Feldmeyer, Barbara; Riesch, Rüdiger; Plath, Martin

    2015-11-01

    Replicated ecological gradients are prime systems to study processes of molecular evolution underlying ecological divergence. Here, we investigated the repeated adaptation of the neotropical fish Poecilia mexicana to habitats containing toxic hydrogen sulphide (H2 S) and compared two population pairs of sulphide-adapted and ancestral fish by sequencing population pools of >200 individuals (Pool-Seq). We inferred the evolutionary processes shaping divergence and tested the hypothesis of increase of parallelism from SNPs to molecular pathways. Coalescence analyses showed that the divergence occurred in the face of substantial bidirectional gene flow. Population divergence involved many short, widely dispersed regions across the genome. Analyses of allele frequency spectra suggest that differentiation at most loci was driven by divergent selection, followed by a selection-mediated reduction of gene flow. Reconstructing allelic state changes suggested that selection acted mainly upon de novo mutations in the sulphide-adapted populations. Using a corrected Jaccard index to quantify parallel evolution, we found a negligible proportion of statistically significant parallel evolution of Jcorr  = 0.0032 at the level of SNPs, divergent genome regions (Jcorr  = 0.0061) and genes therein (Jcorr  = 0.0091). At the level of metabolic pathways, the overlap was Jcorr  = 0.2545, indicating increasing parallelism with increasing level of biological integration. The majority of pathways contained positively selected genes in both sulphide populations. Hence, adaptation to sulphidic habitats necessitated adjustments throughout the genome. The largely unique evolutionary trajectories may be explained by a high proportion of de novo mutations driving the divergence. Our findings favour Gould's view that evolution is often the unrepeatable result of stochastic events with highly contingent effects.

  11. Integrative taxonomy detects cryptic and overlooked fish species in a neotropical river basin.

    Science.gov (United States)

    Gomes, Laís Carvalho; Pessali, Tiago Casarim; Sales, Naiara Guimarães; Pompeu, Paulo Santos; Carvalho, Daniel Cardoso

    2015-10-01

    The great freshwater fish diversity found in the neotropical region makes management and conservation actions challenging. Due to shortage of taxonomists and insufficient infrastructure to deal with such great biodiversity (i.e. taxonomic impediment), proposed remedies to accelerate species identification and descriptions include techniques that combine DNA-based identification and concise morphological description. The building of a DNA barcode reference database correlating meristic and genetic data was developed for 75 % of the Mucuri River basin's freshwater fish. We obtained a total of 141 DNA barcode sequences from 37 species belonging to 30 genera, 19 families, and 5 orders. Genetic distances within species, genera, and families were 0.74, 9.5, and 18.86 %, respectively. All species could be clearly identified by the DNA barcodes. Divergences between meristic morphological characteristics and DNA barcodes revealed two cryptic species among the Cyphocharax gilbert and Astyanax gr. bimaculatus specimens, and helped to identify two overlooked species within the Gymnotus and Astyanax taxa. Therefore, using a simplified model of neotropical biodiversity, we tested the efficiency of an integrative taxonomy approach for species discovery, identification of cryptic diversity, and accelerating biodiversity descriptions.

  12. Fish Consumption during Pregnancy, Mercury Transfer, and Birth Weight along the Madeira River Basin in Amazonia

    Directory of Open Access Journals (Sweden)

    Renata S. Leão

    2013-05-01

    Full Text Available Birth weight can be a predictor of maternal health issues related to nutrition and environmental contaminants. Total hair mercury (HHg concentration was studied as an indicator of both fish consumption and methylmercury exposure in mothers (and newborns living in selected low income areas of the Madeira River basin, Amazonia, Brazil. This cohort study (n = 1,433 consisted of traditional riverines (n = 396, riverines who had moved to urban (n = 676 and rural (n = 67 settings, and tin miner settlers (n = 294. Median maternal HHg was significantly different (p = 0.00001 between riverine (12.1 µg·g−1, rural (7.82 µg·g−1, urban (5.4 µg·g−1, and tin miner (4.5 µg·g−1 groups studied. The same trend (of medians was observed for newborns’ HHg which also showed significant differences between riverine (3.0 µg·g−1, rural (2.0 µg·g−1, urban (1.5 µg·g−1, and tin miner (0.8 µg·g−1 groups. The correlation between maternal and newborn HHg was statistically significant in the riverine (r = 0.8952; p = 0.0001, urban (r = 0.6744; p = 0.0001, and rural (r = 0.8416; p = 0.0001 groups but not in the mother-infant pairs in the tin miner group (r = 0.0638; p = 0.2752. Birth weight was significantly different among groups but did not show a pattern consistent with that of fish consumption (and HHg. A multiple regression analysis showed that only family income and gestational age had a significant impact on birth weight. Conclusions: Maternal HHg is an important biomarker of maternal fish consumption and of methylmercury exposure during pregnancy. However, in these Amazonian groups, only maternal education and gestational age seemed to affect birth weight positively.

  13. Fish community of the river Tiber basin (Umbria-Italy: temporal changes and possible threats to native biodiversity

    Directory of Open Access Journals (Sweden)

    Carosi A.

    2015-01-01

    Full Text Available The introduction of exotic fish species in the river Tiber basin has probably caused a serious alteration of original faunal composition. The purpose of this research was to assess the changes occurred over time in the state of the fish communities with particular reference to the reduction of local communities of endemic species. The study area comprised 68 watercourses of the Umbrian portion of the River Tiber basin; the analyses were carried out using the data of the Regional Fish Map of 1st and 2nd level and the 1st update, respectively collected during the periods between the 1990–1996, 2000–2006 and 2007–2014, in 125 sampling stations. The results show a progressive alteration of the fish communities’ structure, as confirmed by the appearance in recent times of new alien species. A total of 40 species was found, only 14 native. The qualitative change of the fish communities appear to be closely related to the longitudinal gradient of the river. The results shows that particularly in the downstream reaches, the combined action of pollution and introduction of exotic species resulted in a gradual decrease in the indigenous component of fish communities. The information collected are the indispensable premise for taking the necessary strategies for conservation of endangered species.

  14. The relative importance of mangroves and seagrass beds as feeding habitats for resident and transient fishes from Florida and Belize:: evidence from dietary and stable isotope analyses

    Science.gov (United States)

    In the western Atlantic region, the contribution of mangrove food-sources to fish diets has been considered of more limited importance then previously expected due to their constant flooding and proximity to adjacent coastal habitats such as seagrass beds which provide potential ...

  15. Are growth and density quantitative indicators of essential fish habitat quality? An application to the common sole Solea solea nursery grounds

    Science.gov (United States)

    Gilliers, C.; Le Pape, O.; Désaunay, Y.; Morin, J.; Guérault, D.; Amara, R.

    2006-08-01

    Bio-indicators were measured on juvenile fish to assess the quality of eight coastal and estuarine nursery grounds in the Eastern English Channel and in the Bay of Biscay during 3 years. Growth (size and otolith daily increment width), body condition (morphometric index) and abundance of juvenile common soles were analysed together with xenobiotic concentrations (heavy metals and organic contaminants). Condition indices displayed important variations and did not allow relevant estimation of environmental quality. On the contrary, growth and density indicators showed good steadiness above years but varied among sites. In spite of difficulties of interpreting these indicators on such a meso-scale approach, analyses highlighted the estuaries of Seine and Gironde. In these nursery areas, the levels of contamination were especially high, and the combination of fish growth performances and density was significantly lower than in other sites. The combination of these variables appears to provide reliable indicators of habitat quality and anthropogenic pressure on nursery grounds, especially highlighting contaminated areas. Such indicators may thus contribute to improve assessment of environmental quality of essential fish habitats with the aim of a sustainable management of fisheries resources. A study at a different scale, from this meso-scale nursery approach with more precise analyses, on local habitats, will nevertheless be necessary to optimize the relevance of these indicators for the assessment of essential fish habitat quality.

  16. Influences on the Use of the "Fishing: Get in the Habitat! MinnAqua Leader's Guide" and Implications for Curriculum Dissemination

    Science.gov (United States)

    Athman Ernst, Julie

    2010-01-01

    The "Fishing: Get in the Habitat! MinnAqua Leader's Guide" is a curriculum created by the Minnesota Department of Natural Resources for educators working primarily with children in grades three through five in formal and nonformal education settings. Like many agency-developed supplemental educational resources, the Leader's Guide is available…

  17. Evaluating habitat associations of a fish assemblages at multiple scales in a minimally disturbed stream on the Edwards Plateau, Central Texas

    Science.gov (United States)

    Cheek, Brandon D.; Grabowski, Timothy B.; Bean, Preston T.; Groeschel, Jillian R.; Magnelia, Stephan J.

    2016-01-01

    Habitat heterogeneity at multiple scales is a major factor affecting fish assemblage structure. However, assessments that examine these relationships at multiple scales concurrently are lacking. The lack of assessments at these scales is a critical gap in understanding as conservation and restoration efforts typically work at these levels.

  18. Habitat loss as the main cause of the slow recovery of fish faunas of regulated large rivers in Europe: The transversal floodplain gradient

    NARCIS (Netherlands)

    Aarts, B.G.W.; Brink, F.W.B. van den; Nienhuis, P.H.

    2004-01-01

    In large European rivers the chemical water quality has improved markedly in recent decades, yet the recovery of the fish fauna is not proceeding accordingly. Important causes are the loss of habitats in the main river channels and their floodplains, and the diminished hydrological connectivity betw

  19. Lethal effects of habitat degradation on fishes through changing competitive advantage

    OpenAIRE

    McCormick, Mark I.

    2012-01-01

    Coral bleaching has caused catastrophic changes to coral reef ecosystems around the world with profound ecological, social and economic repercussions. While its occurrence is predicted to increase in the future, we have little understanding of mechanisms that underlie changes in the fish community associated with coral degradation. The present study uses a field-based experiment to examine how the intensity of interference competition between juveniles of two species of damselfish changes as ...

  20. The Effects of Mangrove Habitat Degradation on Fish Abundance and Diversity In Ungwana Bay, Kenya.

    OpenAIRE

    Mirera, David H.O.

    2007-01-01

    The inability to acknowledge the indirect economic importance of ecosystem goods and services generated by mangroves (ecological and physical values) is a major driving force behind mangrove degradation. Disturbances and degradation of mangrove ecosystem by human activities such as clear-cutting are increasing. To maintain a balanced ecosystem and sustainable resource use, it is essential to identify the impact such activities have on the ecosystem. Fish and sediment fauna are ...

  1. Annual Progress Report Fish Research Project Oregon : Project title, Evaluation of Habitat Improvements -- John Day River.

    Energy Technology Data Exchange (ETDEWEB)

    Olsen, Erik A.

    1984-01-01

    This report summarizes data collected in 1983 to evaluate habitat improvements in Deer, Camp, and Clear creeks, tributaries of the John Day River. The studies are designed to evaluate changes in abundance of spring chinook and summer steelhead due to habitat improvement projects and to contrast fishery benefits with costs of construction and maintenance of each project. Structure types being evaluated are: (1) log weirs, rock weirs, log deflectors, and in stream boulders in Deer Creek; (2) log weirs in Camp Creek; and (3) log weir-boulder combinations and introduced spawning gravel in Clear Creek. Abundance of juvenile steelhead ranged from 16% to 119% higher in the improved (treatment) area than in the unimproved (control) area of Deer Creek. However, abundance of steelhead in Camp Creek was not significantly different between treatment and control areas. Chinook and steelhead abundance in Clear Creek was 50% and 25% lower, respectively in 1983, than the mean abundance estimated in three previous years. The age structure of steelhead was similar between treatment and control areas in Deer and Clear creeks. The treatment area in Camp Creek, however, had a higher percentage of age 2 and older steelhead than the control. Steelhead redd counts in Camp Creek were 36% lower in 1983 than the previous five year average. Steelhead redd counts in Deer Creek were not made in 1983 because of high streamflows. Chinook redds counted in Clear Creek were 64% lower than the five year average. Surface area, volume, cover, and spawning gravel were the same or higher than the corresponding control in each stream except in Deer Creek where there was less available cover and spawning gravel in sections with rock weirs and in those with log deflectors, respectively. Pool:riffle ratios ranged from 57:43 in sections in upper Clear Creek with log weirs to 9:91 in sections in Deer Creek with rock weirs. Smolt production following habitat improvements is estimated for each stream

  2. Dual impact of temperature on growth and mortality of marine fish larvae in a shallow estuarine habitat

    Science.gov (United States)

    Arula, Timo; Laur, Kerli; Simm, Mart; Ojaveer, Henn

    2015-12-01

    High individual growth and mortality rates of herring Clupea harengus membras and goby Pomatoschistus spp. larvae were observed in the estuarine habitat of the Gulf of Riga, Baltic Sea. Both instantaneous mortality (0.76-1.05) as well as growth rate (0.41-0.82 mm day-1) of larval herring were amongst highest observed elsewhere previously. Mortality rates of goby larvae were also high (0.57-1.05), while first ever data on growth rates were provided in this study (0.23-0.35 mm day-1). Our study also evidenced that higher growth rate of marine fish larvae did not result in lower mortalities. We suggest that high growth and mortality rates primarily resulted from a rapidly increasing and high (>18 °C) water temperature that masked potential food-web effects. The explanation for observed patterns lies in the interactive manner temperature contributed: i) facilitating prey production, which supported high growth rate and decreased mortalities; ii) exceeding physiological thermal optimum of larvae, which resulted in decreased growth rate and generally high mortalities. Our investigation suggests that the projected climate warming may have significant effect on early life history stages of the dominating marine fish species inhabiting shallow estuaries.

  3. A Breeding Bird Survey of the West Mountain Wildlife Management Area and the Nulhegan Basin Division of the Silvio O. Conte National Fish and Wildlife Refuge

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The objectives of this study were to: 1) Create a list of birds occurring in the study area during the breeding season; 2.) Identify species and habitats of...

  4. How Will Climate Change Affect Channel Morphology and Salmonid Habitat in Mountain Basins?

    Science.gov (United States)

    Buffington, J. M.; Goode, J.

    2010-12-01

    Riverine habitat for salmonids is intimately linked to channel morphology and fluvial processes (channel hydraulics, sediment transport and scour regime) which are, in turn, controlled by watershed hydrology and erosional processes that input sediment to the fluvial system. Climate change has the potential to alter the timing, magnitude, and style of sediment and water inputs to mountain rivers. Channel response to these changes may range from small-scale adjustments of channel characteristics (e.g., width, depth, grain size, scour depth) to larger-scale changes in channel type (e.g., metamorphosis from a pool-riffle channel to a plane-bed morphology). Identifying which parts of the river network will remain relatively stable in response to climate change, and which are likely to cross critical morphologic and scour thresholds is important for predicting effects on salmonid populations. Toward this end, a regime framework is presented for predicting the relative degree of morphologic stability and scour potential in different physiographic settings (different water and sediment regimes). Digital elevation models are used to explore the spatial distribution of these conditions and potential consequences for salmonid habitat across the landscape. Results suggest that the potential for scour and morphologic variability are strongly influenced by hydroclimate; snowmelt channels are relatively stable across floods of different magnitude, while rainfall-dominated channels are more variable and less stable. Transitional changes in hydrologic regime (mixed rain and snow) have the greatest potential for altering geomorphic conditions and salmonid habitat. However, the vulnerability of salmonids to climate-driven changes in scour regime depend on the species and its life history (i.e., depth to which eggs are buried and timing of incubation relative to scouring flows). Overall, the regime approach provides a useful first-order assessment of channel condition and response

  5. Following a foraging fish-finder: diel habitat use of Blainville's beaked whales revealed by echolocation.

    Directory of Open Access Journals (Sweden)

    Patricia Arranz

    Full Text Available Simultaneous high resolution sampling of predator behavior and habitat characteristics is often difficult to achieve despite its importance in understanding the foraging decisions and habitat use of predators. Here we tap into the biosonar system of Blainville's beaked whales, Mesoplodon densirostris, using sound and orientation recording tags to uncover prey-finding cues available to echolocating predators in the deep-sea. Echolocation sounds indicate where whales search and encounter prey, as well as the altitude of whales above the sea-floor and the density of organisms around them, providing a link between foraging activity and the bio-physical environment. Tagged whales (n = 9 hunted exclusively at depth, investing most of their search time either in the lower part of the deep scattering layer (DSL or near the sea-floor with little diel change. At least 43% (420/974 of recorded prey-capture attempts were performed within the benthic boundary layer despite a wide range of dive depths, and many dives included both meso- and bentho-pelagic foraging. Blainville's beaked whales only initiate searching when already deep in the descent and encounter prey suitable for capture within 2 min of the start of echolocation, suggesting that these whales are accessing prey in reliable vertical strata. Moreover, these prey resources are sufficiently dense to feed the animals in what is effectively four hours of hunting per day enabling a strategy in which long dives to exploit numerous deep-prey with low nutritional value require protracted recovery periods (average 1.5 h between dives. This apparent searching efficiency maybe aided by inhabiting steep undersea slopes with access to both the DSL and the sea-floor over small spatial scales. Aggregations of prey in these biotopes are located using biosonar-derived landmarks and represent stable and abundant resources for Blainville's beaked whales in the otherwise food-limited deep-ocean.

  6. Probabilistic maturation reaction norms assessed from mark-recaptures of wild fish in their natural habitat.

    Science.gov (United States)

    Olsen, Esben M; Serbezov, Dimitar; Vøllestad, Leif A

    2014-05-01

    Reaction norms are a valuable tool in evolutionary biology. Lately, the probabilistic maturation reaction norm approach, describing probabilities of maturing at combinations of age and body size, has been much applied for testing whether phenotypic changes in exploited populations of fish are mainly plastic or involving an evolutionary component. However, due to typical field data limitations, with imperfect knowledge about individual life histories, this demographic method still needs to be assessed. Using 13 years of direct mark-recapture observations on individual growth and maturation in an intensively sampled population of brown trout (Salmo trutta), we show that the probabilistic maturation reaction norm approach may perform well even if the assumption of equal survival of juvenile and maturing fish does not hold. Earlier studies have pointed out that growth effects may confound the interpretation of shifts in maturation reaction norms, because this method in its basic form deals with body size rather than growth. In our case, however, we found that juvenile body size, rather than annual growth, was more strongly associated with maturation. Viewed against earlier studies, our results also underscore the challenges of generalizing life-history patterns among species and populations. PMID:24967078

  7. Longitudinal habitat disruption in Neotropical streams: fish assemblages under the influence of culverts

    Directory of Open Access Journals (Sweden)

    José Roberto Mariano

    2012-10-01

    Full Text Available This study assessed differences in fish assemblages existing upstream and downstream two types of culverts, one on each of two different Neotropical streams. We analyzed the composition and structure of the ichthyofauna and tested for spatial patterns. Fish sampling was carried out monthly between November 2009 and October 2010 using different fishing gears. We collected 2,220 fish of 33 species; 901 in stretches of the Lopeí stream - circular culvert and 1,310 in stretches of the Pindorama stream - box culvert. Fish abundance was similar in upstream and downstream stretches of the circular culvert, whereas it was slightly higher in the upstream than downstream stretch for the box culvert. Characiformes predominated in the upstream stretch of both culverts. On the other hand, Siluriformes was abundant in the downstream stretch of the circular culvert, with similar abundance in the stretches of the box culvert. Species richness and diversity (Shannon-Weiner Index were higher in the downstream stretch of the circular culvert, but they were similar in both stretches of the box culvert. The most abundant species were Astyanax altiparanae, A. paranae, A. fasciatus, Ancistrus sp., and Hypostomus sp. The last two species were more abundant in the downstream stretch of the circular culvert, and similar in stretches of the box culvert. Our study indicated variations in the species abundance, richness, and diversity between upstream and downstream stretches in particular of the circular culvert in the Lopeí stream, suggesting that fish movements are restrained more intensively in this culvert, especially for Siluriformes. The drop in the circular culvert outlet probably created passage barriers especially for those fish that has no ability to jump, where downstream erosion could lead to culvert perching. Studies on appropriate road crossing design or installation are fundamental whereas improvements in these structures can restore the connectivity of

  8. Tissue levels of the antioxidant enzymes superoxide dismutase and catalase in fish Astyanax bimaculatus from the Una River Basin

    Directory of Open Access Journals (Sweden)

    Maria Tereza Oliveira Batista

    2014-10-01

    Full Text Available STRACT This paper seeks to identify the biomarker response to oxidative stress in Astyanax bimaculatus, a freshwater fish, collected from the Una River and its associated water bodies. The fish were collected using fishing nets at three different points on the river basin, namely Fazenda Piloto (FP, Ipiranga (IP and Remédios (RM, during the period from December 2013 to March 2014. Physical and chemical analyses of the water at the sample locations indicate that IP and RM possibly have larger concentration of either natural or anthropic pollutants as compared to FP. FP can therefore be considered as the point less impacted by pollutants than other points. Hepatic activity of antioxidant stress enzymes, superoxide dismutase (SOD and catalase (CAT, were measured in the specimens. The levels of SOD were reduced at RM while they were elevated in fish collected at IP. The CAT levels for the fish at RM and IP were about 148.9% and 202.4% above the values at FP, respectively. These results suggest that antioxidant enzymes could be used as biomarkers to measure oxidative stress caused by pollutants in the Una River Basin.

  9. Organochlorine pesticides in Piracicaba river basin (São Paulo/Brazil: a survey of sediment, bivalve and fish

    Directory of Open Access Journals (Sweden)

    Daniela Mariano Lopes da Silva

    2008-01-01

    Full Text Available The main objective of this paper was to evaluate the level of occurrence of the organochlorine compounds in samples of sediments, bivalves and two fish species collected in the Piracicaba River basin (São Paulo, Brazil. The isomers alpha and gamma of HCH and Heptachlor were most frequently detected in samples of sediments and specimens of bivalve and fish. Therefore, although the levels of these compounds found were not critically high, they are still found in the environment. This fact suggests that they are still being used, despite the fact that the use of these compounds was outlawed more than twenty years ago.

  10. Delta smelt habitat in the San Francisco Estuary: A reply to Manly, Fullerton, Hendrix, and Burnham’s “Comments on Feyrer et al. Modeling the effects of future outflow on the abiotic habitat of an imperiled estuarine fish"

    Science.gov (United States)

    Feyrer, Frederick V.; Newman, Ken B.; Nobriga, Matthew; Sommer, Ted

    2016-01-01

    Manly et al. (2015) commented on the approach we (Feyrer et al. 2011) used to calculate an index of the abiotic habitat of delta smelt Hypomesus transpacificus. The delta smelt is an annual fish species endemic to the San Francisco Estuary (SFE) in California, USA. Conserving the delta smelt population while providing reliability to California’s water supply with water diverted from the SFE ecosystem is a major management and policy issue. Feyrer et al. (2011) evaluated historic and projected future abiotic habitat conditions for delta smelt. Manly et al. (2015) specifically commented regarding the following: (1) use of an independent abundance estimate, (2) spatial bias in the habitat index, and (3) application of the habitat index to future climate change projections. Here, we provide our reply to these three topics. While we agree that some of the concepts raised by Manly et al. (2015) have the potential to improve habitat assessments and their application to climate change scenarios as knowledge is gained, we note that the Feyrer et al. (2011) delta smelt habitat index is essentially identical to one reconstructed using Manly et al.’s (2015) preferred approach (their model 8), as shown here in Fig. 1.

  11. Cenotes (sinkholes) of the Yucatan Peninsula, Mexico, as a habitat of adult trematodes of fish.

    Science.gov (United States)

    Scholz, T; Vargas-Vázquez, J; Moravec, F; Vivas-Rodríguez, C; Mendoza-Franco, E

    1995-01-01

    Examination of a total of 581 fish specimens of 15 species from 39 cenotes (sinkholes) in the Yucatan Peninsula, southeastern Mexico, revealed the presence of 10 species of adult trematodes. These were as follows: Saccocoelioides sogandaresi Lumsden, 1963, Saccocoelioides sp. (family Haploporidae), Cichlasotrema ujati Pineda et Andrade, 1989 (Angiodictyidae), Crassicutis cichlasomae Manter, 1936 (Homalometridae), Magnivitellinum simplex Kloss, 1966 (Macroderoididae), Stunkardiella minima (Stunkard, 1938) (Acanthostomidae), Oligogonotylus manteri Watson, 1976 (Cryptogonimidae), Genarchella tropica (Manter, 1936), G. astyanactis (Watson, 1976), and G. isabellae (Lamothe-Argumedo, 1977) (Derogenidae). Saccocoelioides sogandaresi is reported from Mexico for the first time. Poecilia velifera and P. latipunctata for S. sogandaresi, Cichlasoma octofasciatum for C. cichlasomae, Cichlasoma friedrichstahli and C. meeki for O. manteri, and C. meeki, C. octofasciatum and Gobiomorus dormitor for G. isabellae represent new host records. Most species found are described and figured and their host range and distribution are discussed. PMID:9599426

  12. High-resolution mapping of European fishing pressure on the benthic habitats

    DEFF Research Database (Denmark)

    Eigaard, Ole Ritzau; Bastardie, Francois; Hintzen, Niels T.;

    -scale maps of benthic fishing pressure covering the EU, Norwegian and Turkish waters. First individual logbook observations from 13 countries were assigned to 17 different functional gear groups (métiers) based on target species and gear type information. Secondly, relationships between gear width and vessel......Mapping and monitoring of pressure from fishery on the marine benthic environment is necessary to support an ecosystem approach to fisheries management (EAFM). In many cases this need is not reflected in official fisheries statistics and logbooks, where focus typically is on catch rather than...... size (e.g. trawl door spread and vessel kW) for each métier were used to assign quantitative information of bottom contact to each logbook trip by translating vessel size information into measures of gear size. Thirdly the extended logbook data was merged with highresolution activity data (VMS...

  13. Habitat complexity and fish size affect the detection of Indo-Pacific lionfish on invaded coral reefs

    Science.gov (United States)

    Green, S. J.; Tamburello, N.; Miller, S. E.; Akins, J. L.; Côté, I. M.

    2013-06-01

    A standard approach to improving the accuracy of reef fish population estimates derived from underwater visual censuses (UVCs) is the application of species-specific correction factors, which assumes that a species' detectability is constant under all conditions. To test this assumption, we quantified detection rates for invasive Indo-Pacific lionfish ( Pterois volitans and P. miles), which are now a primary threat to coral reef conservation throughout the Caribbean. Estimates of lionfish population density and distribution, which are essential for managing the invasion, are currently obtained through standard UVCs. Using two conventional UVC methods, the belt transect and stationary visual census (SVC), we assessed how lionfish detection rates vary with lionfish body size and habitat complexity (measured as rugosity) on invaded continuous and patch reefs off Cape Eleuthera, the Bahamas. Belt transect and SVC surveys performed equally poorly, with both methods failing to detect the presence of lionfish in >50 % of surveys where thorough, lionfish-focussed searches yielded one or more individuals. Conventional methods underestimated lionfish biomass by ~200 %. Crucially, detection rate varied significantly with both lionfish size and reef rugosity, indicating that the application of a single correction factor across habitats and stages of invasion is unlikely to accurately characterize local populations. Applying variable correction factors that account for site-specific lionfish size and rugosity to conventional survey data increased estimates of lionfish biomass, but these remained significantly lower than actual biomass. To increase the accuracy and reliability of estimates of lionfish density and distribution, monitoring programs should use detailed area searches rather than standard visual survey methods. Our study highlights the importance of accounting for sources of spatial and temporal variation in detection to increase the accuracy of survey data from

  14. Yakima and Touchet River Basins Phase II Fish Screen Evaluation, 2006-2007 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Chamness, Mickie; Tunnicliffe, Cherylyn [Pacific Northwest National Laboratory

    2007-03-01

    In 2006, Pacific Northwest National Laboratory (PNNL) researchers evaluated 27 Phase II fish screen sites in the Yakima and Touchet river basins. Pacific Northwest National Laboratory performs these evaluations for Bonneville Power Administration (BPA) to determine whether the fish screening devices meet those National Marine Fisheries (NMFS) criteria for juvenile fish screen design, that promote safe and timely passage of juvenile salmonids. The NMFS criteria against which the sites were evaluated are as follows: (1) a uniform flow distribution over the screen surface to minimize approach velocity; (2) approach velocities less than or equal to 0.4 ft/s protects the smallest salmonids from impingement; (3) sweep velocities that are greater than approach velocities to minimize delay of out-migrating juveniles and minimize sediment deposition near the screens; (4) a bypass flow greater than or equal to the maximum flow velocity vector resultant upstream of the screens to also minimize delay of out-migrating salmonids; (5) a gradual and efficient acceleration of flow from the upstream end of the site into the bypass entrance to minimize delay of out-migrating salmonids; and (6) screen submergence between 65% and 85% for drum screen sites. In addition, the silt and debris accumulation next to the screens should be kept to a minimum to prevent excessive wear on screens, seals and cleaning mechanisms. Evaluations consist of measuring velocities in front of the screens, using an underwater camera to assess the condition and environment in front of the screens, and noting the general condition and operation of the sites. Results of the evaluations in 2006 include the following: (1) Most approach velocities met the NMFS criterion of less than or equal to 0.4 ft/s. Of the sites evaluated, 31% exceeded the criterion at least once. Thirty-three percent of flat-plate screens had problems compared to 25% of drum screens. (2) Woody debris and gravel deposited during high river

  15. Yakima/Klickitat Fisheries Project: Short Project Overview of Spring Chinook Salmon Supplementation in the Upper Yakima Basin; Washington Department of Fish and Wildlife Policy/Technical Involvement and Planning, 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Fast, David E.; Bosch, William J.

    2005-09-01

    were outside of containment objectives were not caused by supplementation activities. Some fish and bird piscivores have been estimated to consume large numbers of salmonids in the Yakima Basin. Natural production of Chinook salmon in the upper Yakima Basin appears to be density dependent under current conditions and may constrain the benefits of supplementation. However, such constraints (if they exist) could be countered by YKFP habitat actions that have resulted in: the protection of over 900 acres of prime floodplain habitat, reconnection and screening of over 15 miles of tributary habitat, substantial water savings through irrigation improvements, and restoration of over 80 acres of floodplain and side channels. Harvest opportunities for tribal and non-tribal fishers have also been enhanced, but are variable among years. The YKFP is still in the early stages of evaluation, and as such the data and findings presented in this report should be considered preliminary until further data is collected and analyses completed. Nonetheless, the YKFP has produced significant findings, and produced methodologies that can be used to evaluate and improve supplementation. A summary table of topical area performance is presented.

  16. Habitat use and diel vertical migration of bigeye thresher shark: Overlap with pelagic longline fishing gear.

    Science.gov (United States)

    Coelho, Rui; Fernandez-Carvalho, Joana; Santos, Miguel N

    2015-12-01

    Pelagic longliners targeting swordfish and tunas in oceanic waters regularly capture sharks as bycatch, including currently protected species as the bigeye thresher, Alopias superciliosus. Fifteen bigeye threshers were tagged with pop-up satellite archival tags (PSATs) in 2012-2014 in the tropical northeast Atlantic, with successful transmissions received from 12 tags for a total of 907 tracking days. Marked diel vertical movements were recorded on all specimens, with most of the daytime spent in deeper colder water (mean depth = 353 m, SD = 73; mean temperature = 10.7 °C, SD = 1.8) and nighttime spent in warmer water closer to the surface (mean depth = 72 m, SD = 54; mean temperature = 21.9 °C, SD = 3.7). The operating depth of the pelagic longline gear was measured with Minilog Temperature and Depth Recorders (TDRs), and the overlap with habitat utilization was calculated. Overlap is taking place mainly during the night and is higher for juveniles. The results presented herein can be used as inputs for Ecological Risk Assessments for bigeye threshers captured in oceanic tuna fisheries, and serve as a basis for efficient management and conservation of this vulnerable shark species. PMID:26559889

  17. Habitat use and diel vertical migration of bigeye thresher shark: Overlap with pelagic longline fishing gear.

    Science.gov (United States)

    Coelho, Rui; Fernandez-Carvalho, Joana; Santos, Miguel N

    2015-12-01

    Pelagic longliners targeting swordfish and tunas in oceanic waters regularly capture sharks as bycatch, including currently protected species as the bigeye thresher, Alopias superciliosus. Fifteen bigeye threshers were tagged with pop-up satellite archival tags (PSATs) in 2012-2014 in the tropical northeast Atlantic, with successful transmissions received from 12 tags for a total of 907 tracking days. Marked diel vertical movements were recorded on all specimens, with most of the daytime spent in deeper colder water (mean depth = 353 m, SD = 73; mean temperature = 10.7 °C, SD = 1.8) and nighttime spent in warmer water closer to the surface (mean depth = 72 m, SD = 54; mean temperature = 21.9 °C, SD = 3.7). The operating depth of the pelagic longline gear was measured with Minilog Temperature and Depth Recorders (TDRs), and the overlap with habitat utilization was calculated. Overlap is taking place mainly during the night and is higher for juveniles. The results presented herein can be used as inputs for Ecological Risk Assessments for bigeye threshers captured in oceanic tuna fisheries, and serve as a basis for efficient management and conservation of this vulnerable shark species.

  18. Water-quality, biological, and physical-habitat conditions at fixed sites in the Cook Inlet Basin, Alaska, National Water-Quality Assessment Study Unit, October 1998-September 2001

    Science.gov (United States)

    Brabets, Timothy P.; Whitman, Matthew S.

    2004-01-01

    , nutrients, and dissolved organic carbon are transported in the spring from the melting snowpack. The urbanized stream, Chester Creek, had the highest concentrations of calcium, magnesium, chloride, and sodium, most likely because of the application of de-icing materials during the winter. Several volatile organic compounds and pesticides also were detected in samples from this stream. Aquatic communities in the Cook Inlet Basin are naturally different than similar sites in the contiguous United States because of the unique conditions of the northern latitudes where the Cook Inlet Basin is located, such as extreme diurnal cycles and long periods of ice cover. Blue-green algae was the dominant algae found at all sites although in some years green algae was the most dominant algae. Macroinvertebrate communities consist primarily of Diptera (true flies), Ephemeroptera (mayflies), and Plecoptera (stoneflies). Lowland areas have higher abundance of aquatic communities than glacier-fed basins. However, samples from the urbanized stream, Chester Creek, were dominated by oligochaetes, a class of worms. Most of the functional feeding groups were collector-gatherers. The number of taxa for both algae and macroinvertebrates were highest in water year 2001, which may be due to the relative mild winter of 2000?2001 and the above average air temperatures for this water year. The streams in the Cook Inlet Basin typically are low gradient. Bank substrates consist of silt, clay, or sand, and bed substrate consists of coarse gravel or cobbles. Vegetation is primarily shrubs and woodlands with spruce or cottonwood trees. Canopy angles vary with the size of the stream or river and are relatively low at the smaller streams and high at the larger streams. Suitable fish habitat, such as woody debris, pools, cobble substrate, and overhanging vegetation, is found at most sites. Of the human activities occurring in the fixed site basins ? high recreational use, logging, and urbanizat

  19. Influence of local and landscape characteristics on the distribution and diversity of fish assemblages of streams in the Ivinhema River basin, Upper Paraná River

    OpenAIRE

    Ana Paula Lemke; Yzel Rondon Súarez

    2013-01-01

    OBJECTIVES: Among the most relevant issues in community ecology is the influence of different ways of addressing the pattern of diversity and distribution of species, and based on this, the present study sought to evaluate the influence of landscape and local characteristics on the richness and composition of fish assemblages in the Ivinhema River basin. METHOD: In the present study, we used data of distribution of fish species in 25 stretches of streams of the Ivinhema River basin, Upper Par...

  20. Coupled Downscaled Climate Models and Ecophysiological Metrics Forecast Habitat Compression for an Endangered Estuarine Fish.

    Directory of Open Access Journals (Sweden)

    Larry R Brown

    Full Text Available Climate change is driving rapid changes in environmental conditions and affecting population and species' persistence across spatial and temporal scales. Integrating climate change assessments into biological resource management, such as conserving endangered species, is a substantial challenge, partly due to a mismatch between global climate forecasts and local or regional conservation planning. Here, we demonstrate how outputs of global climate change models can be downscaled to the watershed scale, and then coupled with ecophysiological metrics to assess climate change effects on organisms of conservation concern. We employed models to estimate future water temperatures (2010-2099 under several climate change scenarios within the large heterogeneous San Francisco Estuary. We then assessed the warming effects on the endangered, endemic Delta Smelt, Hypomesus transpacificus, by integrating localized projected water temperatures with thermal sensitivity metrics (tolerance, spawning and maturation windows, and sublethal stress thresholds across life stages. Lethal temperatures occurred under several scenarios, but sublethal effects resulting from chronic stressful temperatures were more common across the estuary (median >60 days above threshold for >50% locations by the end of the century. Behavioral avoidance of such stressful temperatures would make a large portion of the potential range of Delta Smelt unavailable during the summer and fall. Since Delta Smelt are not likely to migrate to other estuaries, these changes are likely to result in substantial habitat compression. Additionally, the Delta Smelt maturation window was shortened by 18-85 days, revealing cumulative effects of stressful summer and fall temperatures with early initiation of spring spawning that may negatively impact fitness. Our findings highlight the value of integrating sublethal thresholds, life history, and in situ thermal heterogeneity into global change impact

  1. Coupled Downscaled Climate Models and Ecophysiological Metrics Forecast Habitat Compression for an Endangered Estuarine Fish.

    Science.gov (United States)

    Brown, Larry R; Komoroske, Lisa M; Wagner, R Wayne; Morgan-King, Tara; May, Jason T; Connon, Richard E; Fangue, Nann A

    2016-01-01

    Climate change is driving rapid changes in environmental conditions and affecting population and species' persistence across spatial and temporal scales. Integrating climate change assessments into biological resource management, such as conserving endangered species, is a substantial challenge, partly due to a mismatch between global climate forecasts and local or regional conservation planning. Here, we demonstrate how outputs of global climate change models can be downscaled to the watershed scale, and then coupled with ecophysiological metrics to assess climate change effects on organisms of conservation concern. We employed models to estimate future water temperatures (2010-2099) under several climate change scenarios within the large heterogeneous San Francisco Estuary. We then assessed the warming effects on the endangered, endemic Delta Smelt, Hypomesus transpacificus, by integrating localized projected water temperatures with thermal sensitivity metrics (tolerance, spawning and maturation windows, and sublethal stress thresholds) across life stages. Lethal temperatures occurred under several scenarios, but sublethal effects resulting from chronic stressful temperatures were more common across the estuary (median >60 days above threshold for >50% locations by the end of the century). Behavioral avoidance of such stressful temperatures would make a large portion of the potential range of Delta Smelt unavailable during the summer and fall. Since Delta Smelt are not likely to migrate to other estuaries, these changes are likely to result in substantial habitat compression. Additionally, the Delta Smelt maturation window was shortened by 18-85 days, revealing cumulative effects of stressful summer and fall temperatures with early initiation of spring spawning that may negatively impact fitness. Our findings highlight the value of integrating sublethal thresholds, life history, and in situ thermal heterogeneity into global change impact assessments. As

  2. Coupled Downscaled Climate Models and Ecophysiological Metrics Forecast Habitat Compression for an Endangered Estuarine Fish.

    Science.gov (United States)

    Brown, Larry R; Komoroske, Lisa M; Wagner, R Wayne; Morgan-King, Tara; May, Jason T; Connon, Richard E; Fangue, Nann A

    2016-01-01

    Climate change is driving rapid changes in environmental conditions and affecting population and species' persistence across spatial and temporal scales. Integrating climate change assessments into biological resource management, such as conserving endangered species, is a substantial challenge, partly due to a mismatch between global climate forecasts and local or regional conservation planning. Here, we demonstrate how outputs of global climate change models can be downscaled to the watershed scale, and then coupled with ecophysiological metrics to assess climate change effects on organisms of conservation concern. We employed models to estimate future water temperatures (2010-2099) under several climate change scenarios within the large heterogeneous San Francisco Estuary. We then assessed the warming effects on the endangered, endemic Delta Smelt, Hypomesus transpacificus, by integrating localized projected water temperatures with thermal sensitivity metrics (tolerance, spawning and maturation windows, and sublethal stress thresholds) across life stages. Lethal temperatures occurred under several scenarios, but sublethal effects resulting from chronic stressful temperatures were more common across the estuary (median >60 days above threshold for >50% locations by the end of the century). Behavioral avoidance of such stressful temperatures would make a large portion of the potential range of Delta Smelt unavailable during the summer and fall. Since Delta Smelt are not likely to migrate to other estuaries, these changes are likely to result in substantial habitat compression. Additionally, the Delta Smelt maturation window was shortened by 18-85 days, revealing cumulative effects of stressful summer and fall temperatures with early initiation of spring spawning that may negatively impact fitness. Our findings highlight the value of integrating sublethal thresholds, life history, and in situ thermal heterogeneity into global change impact assessments. As

  3. Coupled downscaled climate models and ecophysiological metrics forecast habitat compression for an endangered estuarine fish

    Science.gov (United States)

    Brown, Larry R.; Komoroske, Lisa M; Wagner, R Wayne; Morgan-King, Tara; May, Jason T.; Connon, Richard E; Fangue, Nann A.

    2016-01-01

    Climate change is driving rapid changes in environmental conditions and affecting population and species’ persistence across spatial and temporal scales. Integrating climate change assessments into biological resource management, such as conserving endangered species, is a substantial challenge, partly due to a mismatch between global climate forecasts and local or regional conservation planning. Here, we demonstrate how outputs of global climate change models can be downscaled to the watershed scale, and then coupled with ecophysiological metrics to assess climate change effects on organisms of conservation concern. We employed models to estimate future water temperatures (2010–2099) under several climate change scenarios within the large heterogeneous San Francisco Estuary. We then assessed the warming effects on the endangered, endemic Delta Smelt, Hypomesus transpacificus, by integrating localized projected water temperatures with thermal sensitivity metrics (tolerance, spawning and maturation windows, and sublethal stress thresholds) across life stages. Lethal temperatures occurred under several scenarios, but sublethal effects resulting from chronic stressful temperatures were more common across the estuary (median >60 days above threshold for >50% locations by the end of the century). Behavioral avoidance of such stressful temperatures would make a large portion of the potential range of Delta Smelt unavailable during the summer and fall. Since Delta Smelt are not likely to migrate to other estuaries, these changes are likely to result in substantial habitat compression. Additionally, the Delta Smelt maturation window was shortened by 18–85 days, revealing cumulative effects of stressful summer and fall temperatures with early initiation of spring spawning that may negatively impact fitness. Our findings highlight the value of integrating sublethal thresholds, life history, and in situ thermal heterogeneity into global change impact assessments. As

  4. Fish biodiversity and conservation in South America.

    Science.gov (United States)

    Reis, R E; Albert, J S; Di Dario, F; Mincarone, M M; Petry, P; Rocha, L A

    2016-07-01

    The freshwater and marine fish faunas of South America are the most diverse on Earth, with current species richness estimates standing above 9100 species. In addition, over the last decade at least 100 species were described every year. There are currently about 5160 freshwater fish species, and the estimate for the freshwater fish fauna alone points to a final diversity between 8000 and 9000 species. South America also has c. 4000 species of marine fishes. The mega-diverse fish faunas of South America evolved over a period of >100 million years, with most lineages tracing origins to Gondwana and the adjacent Tethys Sea. This high diversity was in part maintained by escaping the mass extinctions and biotic turnovers associated with Cenozoic climate cooling, the formation of boreal and temperate zones at high latitudes and aridification in many places at equatorial latitudes. The fresh waters of the continent are divided into 13 basin complexes, large basins consolidated as a single unit plus historically connected adjacent coastal drainages, and smaller coastal basins grouped together on the basis of biogeographic criteria. Species diversity, endemism, noteworthy groups and state of knowledge of each basin complex are described. Marine habitats around South America, both coastal and oceanic, are also described in terms of fish diversity, endemism and state of knowledge. Because of extensive land use changes, hydroelectric damming, water divergence for irrigation, urbanization, sedimentation and overfishing 4-10% of all fish species in South America face some degree of extinction risk, mainly due to habitat loss and degradation. These figures suggest that the conservation status of South American freshwater fish faunas is better than in most other regions of the world, but the marine fishes are as threatened as elsewhere. Conserving the remarkable aquatic habitats and fishes of South America is a growing challenge in face of the rapid anthropogenic changes of the 21

  5. Evaluating habitat associations of a fish assemblage at multiple spatial scales in a minimally disturbed stream using low-cost remote sensing

    Science.gov (United States)

    Cheek, Brandon D.; Grabowski, Timothy B.; Bean, Preston T.; Groeschel, Jillian R.; Magnelia, Stephan J.

    2016-01-01

    Habitat heterogeneity at multiple scales is a major factor affecting fish assemblage structure. However, assessments that examine these relationships at multiple scales concurrently are lacking. The lack of assessments at these scales is a critical gap in understanding as conservation and restoration efforts typically work at these levels.A combination of low-cost side-scan sonar surveys, aerial imagery using an unmanned aerial vehicle, and fish collections were used to evaluate the relationship between physicochemical and landscape variables at various spatial scales (e.g. micro-mesohabitat, mesohabitat, channel unit, stream reach) and stream–fish assemblage structure and habitat associations in the South Llano River, a spring-fed second-order stream on the Edwards Plateau in central Texas during 2012–2013.Low-cost side-scan sonar surveys have not typically been used to generate data for riverscape assessments of assemblage structure, thus the secondary objective was to assess the efficacy of this approach.The finest spatial scale (micro-mesohabitat) and the intermediate scale (channel unit) had the greatest explanatory power for variation in fish assemblage structure.Many of the fish endemic to the Edwards Plateau showed similar associations with physicochemical and landscape variables suggesting that conservation and restoration actions targeting a single endemic species may provide benefits to a large proportion of the endemic species in this system.Low-cost side-scan sonar proved to be a cost-effective means of acquiring information on the habitat availability of the entire river length and allowed the assessment of how a full suite of riverscape-level variables influenced local fish assemblage structure.

  6. Habitat monitoring plan

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Management of habitat is required in order to achieve the refuge purpose and wildlife objectives. The Upland Habitat Management Plan (1993, Interim Plan) and the...

  7. Delimiting Evolutionarily Significant Units of the Fish, Piaractus brachypomus (Characiformes: Serrasalmidae), from the Orinoco and Amazon River Basins with Insight on Routes of Historical Connectivity.

    Science.gov (United States)

    Escobar, Maria Doris; Andrade-López, Juana; Farias, Izeni P; Hrbek, Tomas

    2015-01-01

    The freshwater fish Piaractus brachypomus is an economically important for human consumption both in commercial fisheries and aquaculture in all South American countries where it occurs. In recent years the species has decreased in abundance due to heavy fishing pressure. The species occurs in the Amazon and Orinoco basins, but lack of meristic differences between fishes from the 2 basins, and extensive migration associated with reproduction, have resulted in P. brachypomus being considered a single panmictic species. Analysis of 7 nuclear microsatellites, mitochondrial DNA sequences (D-loop and COI), and body shape variables demonstrated that each river basin is populated by a distinct evolutionarily significant unit (ESU); the 2 groups had an average COI divergence of 3.5% and differed in body depth and relative head length. Historical connection between the 2 basins most probably occurred via the Rupununi portal rather than via the Casiquiare canal. The 2 ESUs will require independent fishery management, and translocation of fisheries stocks between basins should be avoided to prevent loss of local adaptations or extinction associated with outbreeding depression. Introductions of fishes from the Orinoco basin into the Putumayo River basin, an Amazon basin drainage, and evidence of hybridization between the 2 ESUs have already been detected.

  8. Delimiting Evolutionarily Significant Units of the Fish, Piaractus brachypomus (Characiformes: Serrasalmidae), from the Orinoco and Amazon River Basins with Insight on Routes of Historical Connectivity.

    Science.gov (United States)

    Escobar, Maria Doris; Andrade-López, Juana; Farias, Izeni P; Hrbek, Tomas

    2015-01-01

    The freshwater fish Piaractus brachypomus is an economically important for human consumption both in commercial fisheries and aquaculture in all South American countries where it occurs. In recent years the species has decreased in abundance due to heavy fishing pressure. The species occurs in the Amazon and Orinoco basins, but lack of meristic differences between fishes from the 2 basins, and extensive migration associated with reproduction, have resulted in P. brachypomus being considered a single panmictic species. Analysis of 7 nuclear microsatellites, mitochondrial DNA sequences (D-loop and COI), and body shape variables demonstrated that each river basin is populated by a distinct evolutionarily significant unit (ESU); the 2 groups had an average COI divergence of 3.5% and differed in body depth and relative head length. Historical connection between the 2 basins most probably occurred via the Rupununi portal rather than via the Casiquiare canal. The 2 ESUs will require independent fishery management, and translocation of fisheries stocks between basins should be avoided to prevent loss of local adaptations or extinction associated with outbreeding depression. Introductions of fishes from the Orinoco basin into the Putumayo River basin, an Amazon basin drainage, and evidence of hybridization between the 2 ESUs have already been detected. PMID:26245778

  9. REPRODUCTION, HABITAT UTILIZATION, AND MOVEMENTS OF HOGFISH (LACHNOLAIMUS MAXIMUS) IN THE FLORIDA KEYS, U.S.A.: COMPARISONS FROM FISHED VERSUS UNFISHED HABITATS (CRCP)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — in situ visual surveys of hogfish reproductive behavior, spawning and courtship events, movements estimates of habitat composition of the seafloor

  10. Eco-hydrologic model cascades: Simulating land use and climate change impacts on hydrology, hydraulics and habitats for fish and macroinvertebrates.

    Science.gov (United States)

    Guse, Björn; Kail, Jochem; Radinger, Johannes; Schröder, Maria; Kiesel, Jens; Hering, Daniel; Wolter, Christian; Fohrer, Nicola

    2015-11-15

    Climate and land use changes affect the hydro- and biosphere at different spatial scales. These changes alter hydrological processes at the catchment scale, which impact hydrodynamics and habitat conditions for biota at the river reach scale. In order to investigate the impact of large-scale changes on biota, a cascade of models at different scales is required. Using scenario simulations, the impact of climate and land use change can be compared along the model cascade. Such a cascade of consecutively coupled models was applied in this study. Discharge and water quality are predicted with a hydrological model at the catchment scale. The hydraulic flow conditions are predicted by hydrodynamic models. The habitat suitability under these hydraulic and water quality conditions is assessed based on habitat models for fish and macroinvertebrates. This modelling cascade was applied to predict and compare the impacts of climate- and land use changes at different scales to finally assess their effects on fish and macroinvertebrates. Model simulations revealed that magnitude and direction of change differed along the modelling cascade. Whilst the hydrological model predicted a relevant decrease of discharge due to climate change, the hydraulic conditions changed less. Generally, the habitat suitability for fish decreased but this was strongly species-specific and suitability even increased for some species. In contrast to climate change, the effect of land use change on discharge was negligible. However, land use change had a stronger impact on the modelled nitrate concentrations affecting the abundances of macroinvertebrates. The scenario simulations for the two organism groups illustrated that direction and intensity of changes in habitat suitability are highly species-dependent. Thus, a joined model analysis of different organism groups combined with the results of hydrological and hydrodynamic models is recommended to assess the impact of climate and land use changes on

  11. Eco-hydrologic model cascades: Simulating land use and climate change impacts on hydrology, hydraulics and habitats for fish and macroinvertebrates.

    Science.gov (United States)

    Guse, Björn; Kail, Jochem; Radinger, Johannes; Schröder, Maria; Kiesel, Jens; Hering, Daniel; Wolter, Christian; Fohrer, Nicola

    2015-11-15

    Climate and land use changes affect the hydro- and biosphere at different spatial scales. These changes alter hydrological processes at the catchment scale, which impact hydrodynamics and habitat conditions for biota at the river reach scale. In order to investigate the impact of large-scale changes on biota, a cascade of models at different scales is required. Using scenario simulations, the impact of climate and land use change can be compared along the model cascade. Such a cascade of consecutively coupled models was applied in this study. Discharge and water quality are predicted with a hydrological model at the catchment scale. The hydraulic flow conditions are predicted by hydrodynamic models. The habitat suitability under these hydraulic and water quality conditions is assessed based on habitat models for fish and macroinvertebrates. This modelling cascade was applied to predict and compare the impacts of climate- and land use changes at different scales to finally assess their effects on fish and macroinvertebrates. Model simulations revealed that magnitude and direction of change differed along the modelling cascade. Whilst the hydrological model predicted a relevant decrease of discharge due to climate change, the hydraulic conditions changed less. Generally, the habitat suitability for fish decreased but this was strongly species-specific and suitability even increased for some species. In contrast to climate change, the effect of land use change on discharge was negligible. However, land use change had a stronger impact on the modelled nitrate concentrations affecting the abundances of macroinvertebrates. The scenario simulations for the two organism groups illustrated that direction and intensity of changes in habitat suitability are highly species-dependent. Thus, a joined model analysis of different organism groups combined with the results of hydrological and hydrodynamic models is recommended to assess the impact of climate and land use changes on

  12. Between-Habitat Variation of Benthic Cover, Reef Fish Assemblage and Feeding Pressure on the Benthos at the Only Atoll in South Atlantic: Rocas Atoll, NE Brazil

    OpenAIRE

    Longo, G. O.; Morais, R. A.; C D L Martins; Mendes, T. C.; Aued, A. W.; Cândido, D. V.; Oliveira, J. C.; L T Nunes; Fontoura, L.; M N Sissini; Teschima, M. M.; M. B. Silva; Ramlov, F.; Gouvea, L. P.; Ferreira, C. E. L.

    2015-01-01

    The Southwestern Atlantic harbors unique and relatively understudied reef systems, including the only atoll in South Atlantic: Rocas atoll. Located 230 km off the NE Brazilian coast, Rocas is formed by coralline red algae and vermetid mollusks, and is potentially one of the most "pristine" areas in Southwestern Atlantic. We provide the first comprehensive and integrative description of the fish and benthic communities inhabiting different shallow reef habitats of Rocas. We studied two contras...

  13. Epidemiological Study on Frequency of Myxosporidian Diseases in Freshwater Fish Stemming from Aquatic Habitats Pertaining to the Danubian Delta Biosphere Reservation

    OpenAIRE

    Laura Daniela Urdeş; Cristiana Diaconescu; Marius Hangan; Marin Monica; Ştefan Diaconescu

    2010-01-01

    order to measure their frequencies and distributions within populations of Esox lucius, Sander lucioperca(Henneguyosis) and Perca fluviatilis (Myxoboliosis) originating from Sontea-Fortuna (S.F.) and Gorgova-Uzlina(G.U.) aquatic habitats, within the Biosphere Reservation of Danubian Delta, Romania.The biologic material was selected without prior knowledge of the disease status. Prevalence was determined byclassifying fishes as either diseased/infected or not, at one moment in time (Point prev...

  14. Fish fauna in Iberian Mediterranean river basins: biodiversity, introduced species and damming impacts

    OpenAIRE

    Clavero, Miguel; Blanco-Garrido, F.; Prenda, J.

    2004-01-01

    1. A basin approximation was used to analyse distribution patterns of different components of biodiversity (taxonomic richness, endemicity, taxonomic singularity, rarity) and conservation status of freshwater fish fauna in 27 Mediterranean Iberian rivers. 2. Basin area alone explained more than 80% of variation in native species richness. Larger basins featured not only a higher number of native species, but also more endemic and rare species and fewer diversified genera than smaller basins. ...

  15. FBSAB Recruit Fish Habitat Use Surveys at Hawaii Island (Big Island), Main Hawaiian Islands, 2009 (NODC Accession 0073870)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Recruit-habitat relations (habitat use by recruits) were surveyed at 1 to ~5 m depths based on all "Encounters" of singletons and "groups" (where a group comprised...

  16. Between-Habitat Variation of Benthic Cover, Reef Fish Assemblage and Feeding Pressure on the Benthos at the Only Atoll in South Atlantic: Rocas Atoll, NE Brazil.

    Directory of Open Access Journals (Sweden)

    G O Longo

    Full Text Available The Southwestern Atlantic harbors unique and relatively understudied reef systems, including the only atoll in South Atlantic: Rocas atoll. Located 230 km off the NE Brazilian coast, Rocas is formed by coralline red algae and vermetid mollusks, and is potentially one of the most "pristine" areas in Southwestern Atlantic. We provide the first comprehensive and integrative description of the fish and benthic communities inhabiting different shallow reef habitats of Rocas. We studied two contrasting tide pool habitats: open pools, which communicate with the open ocean even during low tides, thus more exposed to wave action; and closed pools, which remain isolated during low tide and are comparatively less exposed. Reef fish assemblages, benthic cover, algal turfs and fish feeding pressure on the benthos remarkably varied between open and closed pools. The planktivore Thalassoma noronhanum was the most abundant fish species in both habitats. In terms of biomass, the lemon shark Negaprion brevirostris and the omnivore Melichtys niger were dominant in open pools, while herbivorous fishes (mainly Acanthurus spp. prevailed in closed pools. Overall benthic cover was dominated by algal turfs, composed of articulated calcareous algae in open pools and non-calcified algae in closed pools. Feeding pressure was dominated by acanthurids and was 10-fold lower in open pools than in closed pools. Besides different wave exposure conditions, such pattern could also be related to the presence of sharks in open pools, prompting herbivorous fish to feed more in closed pools. This might indirectly affect the structure of reef fish assemblages and benthic communities. The macroalgae Digenea simplex, which is uncommon in closed pools and abundant in the reef flat, was highly preferred in herbivory assays, indicating that herbivory by fishes might be shaping this distribution pattern. The variations in benthic and reef fish communities, and feeding pressure on the benthos

  17. Between-Habitat Variation of Benthic Cover, Reef Fish Assemblage and Feeding Pressure on the Benthos at the Only Atoll in South Atlantic: Rocas Atoll, NE Brazil.

    Science.gov (United States)

    Longo, G O; Morais, R A; Martins, C D L; Mendes, T C; Aued, A W; Cândido, D V; de Oliveira, J C; Nunes, L T; Fontoura, L; Sissini, M N; Teschima, M M; Silva, M B; Ramlov, F; Gouvea, L P; Ferreira, C E L; Segal, B; Horta, P A; Floeter, S R

    2015-01-01

    The Southwestern Atlantic harbors unique and relatively understudied reef systems, including the only atoll in South Atlantic: Rocas atoll. Located 230 km off the NE Brazilian coast, Rocas is formed by coralline red algae and vermetid mollusks, and is potentially one of the most "pristine" areas in Southwestern Atlantic. We provide the first comprehensive and integrative description of the fish and benthic communities inhabiting different shallow reef habitats of Rocas. We studied two contrasting tide pool habitats: open pools, which communicate with the open ocean even during low tides, thus more exposed to wave action; and closed pools, which remain isolated during low tide and are comparatively less exposed. Reef fish assemblages, benthic cover, algal turfs and fish feeding pressure on the benthos remarkably varied between open and closed pools. The planktivore Thalassoma noronhanum was the most abundant fish species in both habitats. In terms of biomass, the lemon shark Negaprion brevirostris and the omnivore Melichtys niger were dominant in open pools, while herbivorous fishes (mainly Acanthurus spp.) prevailed in closed pools. Overall benthic cover was dominated by algal turfs, composed of articulated calcareous algae in open pools and non-calcified algae in closed pools. Feeding pressure was dominated by acanthurids and was 10-fold lower in open pools than in closed pools. Besides different wave exposure conditions, such pattern could also be related to the presence of sharks in open pools, prompting herbivorous fish to feed more in closed pools. This might indirectly affect the structure of reef fish assemblages and benthic communities. The macroalgae Digenea simplex, which is uncommon in closed pools and abundant in the reef flat, was highly preferred in herbivory assays, indicating that herbivory by fishes might be shaping this distribution pattern. The variations in benthic and reef fish communities, and feeding pressure on the benthos between open and

  18. Fish Distribution and Habitat, Aquatic Invasive Species (AIS) animal distribution in Wisconsin - Rainbow Smelt, Published in 2009, 1:24000 (1in=2000ft) scale, Wisconsin DNR Bureau of Watershed Management.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Fish Distribution and Habitat dataset, published at 1:24000 (1in=2000ft) scale, was produced all or in part from Field Observation information as of 2009. It...

  19. Habitat monitoring needs for Arapaho NWR

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This document is the refuge's ideas on what level of monitoring is needed for each habitat objective. Habitat objectives include riparian habitat, wetland habitat,...

  20. Evolution of Rotations in the Fish Creek Vallecito Basin, Western Salton Trough, CA

    Science.gov (United States)

    Housen, B. A.; Dorsey, R. J.; Janecke, S. U.; Axen, G. J.

    2006-12-01

    Rocks in the Western Salton Trough region record the history of slip on the transtensional West Salton detachment fault and initiation of younger strike-slip faults in this plate boundary zone. Spatial and temporal patterns of vertical axis rotations as determined by paleomagnetism can be used to provide valuable constraints on the structural-tectonic evolution of this area. Prior work includes the magnetostratigraphy of Plio-Pleistocene sedimentary rocks in the Fish Creek-Vallecito Basin (FCVB) (Opdyke et al., 1977; Johnson et al., 1983), who found that these rocks contain a complete record of geomagnetic field reversals spanning Pliocene-Pleistocene time. Johnson et al. (1983) also concluded that the FCVB had undergone 35° of CW rotation during the past 0.9 Ma. We resampled and reanalyzed their section, and sampled additional sedimentary and plutonic rocks in the Western Salton Trough in order to better document the history of vertical axis rotation recorded by these rocks. Results from 29 sites in the FCVB have well-defined magnetizations with two components. The first removed component in all samples is unblocked between 90 and 220 °C, and the second-removed components are unblocked between 300 and 590 °C. The second-removed components have either normal or reversed polarity. Sites from the Diablo Fm are predominantly reversed and have a mean of D = 204, I = -48.3, k = 37, α95 = 12.7°, N = 5. Sites from the middle of the section (Olla and Tapiado Fms) are predominantly normal and have a mean of D = 8.1, I = 48, k = 32, α95= 8.7°, N = 10. Sites from the upper portion of the section (Hueso Fm) have predominantly reversed polarity with means of D = 179.6, I = -43.4, k = 82, α95 = 10.2°, N = 4. Results from weakly-magnetized and deformed rocks of the La Posta pluton, on the south side of Whale Peak, have well-defined magnetizations with a group mean direction of D = 16.3, I = 37.3, k = 44, α95 = 7.4°, N = 10. The stratigraphic distribution of declination

  1. Communities of gastrointestinal helminths of fish in historically connected habitats: habitat fragmentation effect in a carnivorous catfish Pelteobagrus fulvidraco from seven lakes in flood plain of the Yangtze River, China

    Directory of Open Access Journals (Sweden)

    Yao Wei J

    2009-04-01

    Full Text Available Abstract Background Habitat fragmentation may result in the reduction of diversity of parasite communities by affecting population size and dispersal pattern of species. In the flood plain of the Yangtze River in China, many lakes, which were once connected with the river, have become isolated since the 1950s from the river by the construction of dams and sluices, with many larger lakes subdivided into smaller ones by road embankments. These artificial barriers have inevitably obstructed the migration of fish between the river and lakes and also among lakes. In this study, the gastrointestinal helminth communities were investigated in a carnivorous fish, the yellowhead catfish Pelteobagrus fulvidraco, from two connected and five isolated lakes in the flood plain in order to detect the effect of lake fragmentation on the parasite communities. Results A total of 11 species of helminths were recorded in the stomach and intestine of P. fulvidraco from seven lakes, including two lakes connected with the Yangtze River, i.e. Poyang and Dongting lakes, and five isolated lakes, i.e. Honghu, Liangzi, Tangxun, Niushan and Baoan lakes. Mean helminth individuals and diversity of helminth communities in Honghu and Dongting lakes was lower than in the other five lakes. The nematode Procamallanus fulvidraconis was the dominant species of communities in all the seven lakes. No significant difference in the Shannon-Wiener index was detected between connected lakes (0.48 and isolated lakes (0.50. The similarity of helminth communities between Niushan and Baoan lakes was the highest (0.6708, and the lowest was between Tangxun and Dongting lakes (0.1807. The similarity was low between Dongting and the other lakes, and the similarity decreased with the geographic distance among these lakes. The helminth community in one connected lake, Poyang Lake was clustered with isolated lakes, but the community in Dongting Lake was separated in the tree. Conclusion The

  2. Washington Phase II Fish Diversion Screen Evaluations in the Yakima River Basin, 2004-2005 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Vucelick, Jessica; McMichael, Geoffrey; Chamness, Mickie [Pacific Northwest National Laboratory

    2006-02-01

    In 2004, the Pacific Northwest National Laboratory (PNNL) evaluated 25 Phase II fish screen sites in the Yakima River Basin as part of a multi-year project for the Bonneville Power Administration on the effectiveness of fish screening devices. PNNL collected data to determine whether velocities in front of the screens and in the bypasses met the National Oceanic and Atmospheric Administration Fisheries (NOAA Fisheries, formerly the National Marine Fisheries Service (NMFS)) criteria to promote safe and timely fish passage. In addition, PNNL conducted underwater video surveys to evaluate the environmental and operational conditions of the screen sites with respect to fish passage. Based on evaluations in 2004, PNNL concluded that: (1) In general, water velocity conditions at the screen sites met fish passage criteria set by NOAA Fisheries. (2) Conditions at most facilities would be expected to provide for safe juvenile fish passage. (3) Automated cleaning brushes generally functioned properly; chains and other moving parts were typically well-greased and operative. (4) Removal of sediment buildup and accumulated leafy and woody debris could be improved at some sites. (5) Conditions at some facilities indicate that operation and/or maintenance should be modified to improve passage conditions for juvenile fish. For example, Taylor has had problems meeting bypass flow and submergence operating criteria since the main river channel shifted away from the site 2 years ago, and Fruitvale consistently has had problems meeting bypass flow criteria when the water is low. (6) Continued problems at Gleed point to design flaws. This site should be considered for redesign or replacement.

  3. Biomonitoring of Environmental Status and Trends (BEST) Program: Environmental Contaminants and their Effects on Fish in the Mississippi River Basin

    Science.gov (United States)

    Schmitt, Christopher J.

    2002-01-01

    We collected, examined, and analyzed 1378 fish of 22 species from 47 sites in the Mississippi River basin (MRB) during 1995 and from a reference site in 1996. The sampling sites in the MRB represented National Contaminant Biomonitoring Program (NCBP) stations situated at key points on major rivers and National Water- Quality Assessment Program (NAWQA) stations located on lower-order rivers and streams in the Eastern Iowa Basins (EIB) and Mississippi Embayment (MSE) Study Units. The reference site was the water supply system of the USGS-Leetown Science Center in rural Jefferson County, WV. Common carp (Cyprinus carpio; carp) and black basses (Micropterus spp.; bass), the targeted species, together represented 82% of the fish collected. Each fish was examined in the field for externally and internally visible gross lesions, selected organs were weighed to compute various ponderal and organo-somatic indices, and selected tissues and fluids were obtained and preserved for analysis of biomarkers. Fish health indicators included splenic macrophage aggregates, lysozyme activity, and hispathological analysis of liver, kidney, and other tissues. Reproductive biomarkers included analysis of plasma concentrations of vitellogenin (vtg) and the sex steroid hormones 17-estradiol (E2) and 11-ketotestosterone (11- kt); and the histological determination of percent oocyte atresia (in female fish) and gonadal stage. Hepatic ethoxyresorufin O-deethylase (EROD) activity was also measured. Composite samples of whole fish from each station were grouped by species and gender and analyzed for persistent organochlorine and elemental contaminants and for dioxin-like activity (TCDD-EQ) using the H4IIE rat hepatoma cell bioassay. Organochlorine and inorganic contaminant concentrations in fish were generally low relative to historical levels at most sites, but remained present at concentrations representing threats to piscivorous wildlife in some locations. Toxaphene and DDT (mostly as p

  4. Improvement of Anadromous Fish Habitat and Passage in Omak Creek, 2008 Annual Report : February 1, 2008 to January 31, 2009.

    Energy Technology Data Exchange (ETDEWEB)

    Dasher, Rhonda; Fisher, Christopher [Colville Confederated Tribes

    2009-06-09

    During the 2008 season, projects completed under BPA project 2000-100-00 included installation of riparian fencing, maintenance of existing riparian fencing, monitoring of at-risk culverts and installation of riparian vegetation along impacted sections of Omak Creek. Redd and snorkel surveys were conducted in Omak Creek to determine steelhead production. Canopy closure surveys were conducted to monitor riparian vegetation recovery after exclusion of cattle since 2000 from a study area commonly known as the Moomaw property. Additional redd and fry surveys were conducted above Mission Falls and in the lower portion of Stapaloop Creek to try and determine whether there has been successful passage at Mission Falls. Monitoring adult steelhead trying to navigate the falls resulted in the discovery of shallow pool depth at an upper pool that is preventing many fish from successfully navigating the entire falls. The Omak Creek Habitat and Passage Project has worked with NRCS to obtain additional funds to implement projects in 2009 that will address passage at Mission Falls, culvert replacement, as well as additional riparian planting. The Omak Creek Technical Advisory Group (TAG) is currently revising the Omak Creek Watershed Assessment. In addition, the group is revising strategy to focus efforts in targeted areas to provide a greater positive impact within the watershed. In 2008 the NRCS Riparian Technical Team was supposed to assess areas within the watershed that have unique problems and require special treatments to successfully resolve the issues involved. The technical team will be scheduled for 2009 to assist the TAG in developing strategies for these special areas.

  5. Synergistic interactions within disturbed habitats between temperature, relative humidity and UVB radiation on egg survival in a diadromous fish.

    Directory of Open Access Journals (Sweden)

    Michael J H Hickford

    Full Text Available Anthropogenic impacts, including urbanization, deforestation, farming, and livestock grazing have altered riparian margins worldwide. One effect of changes to riparian vegetation is that the ground-level light, temperature, and humidity environment has also been altered. Galaxias maculatus, one of the most widely distributed fishes of the southern hemisphere, lays eggs almost exclusively beneath riparian vegetation in tidally influenced reaches of rivers. We hypothesized that the survival of these eggs is greatly affected by the micro-environment afforded by vegetation, particularly relating to temperature, humidity and UVB radiation. We experimentally reduced riparian vegetation height and altered shading characteristics, tracked egg survival, and used small ground-level temperature, humidity and UVB sensors to relate survival to ground-level effects around egg masses. The ground-level physical environment was markedly different from the surrounding ambient conditions. Tall dense riparian vegetation modified ambient conditions to produce a buffered temperature regime with constant high relative humidity, generally above 90%, and negligible UVB radiation at ground-level. Where vegetation height was reduced, frequent high temperatures, low humidity, and high UVB irradiances reduced egg survival by up to 95%. Temperature effects on egg survival were probably indirect, through reduced humidity, because developing eggs are known to survive in a wide range of temperatures. In this study, it was remarkable how such small variations in relatively small sites could have such a large effect on egg survival. It appears that modifications to riparian vegetation and the associated changes in the physical conditions of egg laying sites are major mechanisms affecting egg survival. The impacts associated with vegetational changes through human-induced disturbances are complex yet potentially devastating. These effects are particularly important because they

  6. Synergistic interactions within disturbed habitats between temperature, relative humidity and UVB radiation on egg survival in a diadromous fish.

    Science.gov (United States)

    Hickford, Michael J H; Schiel, David R

    2011-01-01

    Anthropogenic impacts, including urbanization, deforestation, farming, and livestock grazing have altered riparian margins worldwide. One effect of changes to riparian vegetation is that the ground-level light, temperature, and humidity environment has also been altered. Galaxias maculatus, one of the most widely distributed fishes of the southern hemisphere, lays eggs almost exclusively beneath riparian vegetation in tidally influenced reaches of rivers. We hypothesized that the survival of these eggs is greatly affected by the micro-environment afforded by vegetation, particularly relating to temperature, humidity and UVB radiation. We experimentally reduced riparian vegetation height and altered shading characteristics, tracked egg survival, and used small ground-level temperature, humidity and UVB sensors to relate survival to ground-level effects around egg masses. The ground-level physical environment was markedly different from the surrounding ambient conditions. Tall dense riparian vegetation modified ambient conditions to produce a buffered temperature regime with constant high relative humidity, generally above 90%, and negligible UVB radiation at ground-level. Where vegetation height was reduced, frequent high temperatures, low humidity, and high UVB irradiances reduced egg survival by up to 95%. Temperature effects on egg survival were probably indirect, through reduced humidity, because developing eggs are known to survive in a wide range of temperatures. In this study, it was remarkable how such small variations in relatively small sites could have such a large effect on egg survival. It appears that modifications to riparian vegetation and the associated changes in the physical conditions of egg laying sites are major mechanisms affecting egg survival. The impacts associated with vegetational changes through human-induced disturbances are complex yet potentially devastating. These effects are particularly important because they affect a very small

  7. Ecological response of a multi-purpose river development project using macro-invertebrates richness and fish habitat value

    International Nuclear Information System (INIS)

    SYNERGIE project optimizer taking into account all the project poles. The system of interest is composed of a buffering reservoir of ca. 1 km2, a run-off-the- river dam, a hydro power-plant, and an artificial river ensuring longitudinal continuum. The primary part of the work consisted in an extensive literature review on system understanding, anthropic alterations and quality assessment / prediction tool available. The approach consisted of two levels (1) the general ecological considerations to be followed at the project reservoir scale and (2) the measure of the downstream ecological response through modeling. General ecological considerations at the reservoir scale were the implementation of an artificial river ensuring longitudinal connectivity, implementation of artificial ecotonal boosters and the allocation of a sanctuary zone with limited public access. The downstream measure of ecological integrity was based on the choice of three taxonomic groups of macroinvertebrates and four ecological guilds (groups) of fish. Mayflies (Ephemeroptera), stoneflies (Plecoptera) and caddisflies (Trichoptera) richness were predicted using simple hydrological and morphological covariates (i.e. substrate, current speed,...) coupled to system specific faunistic surveys. Bank, riffle, pool and midstream fish guilds habitat values were determined using existing methods. By using the simulation results of river development project scenarios as inputs, the ecological response (i.e. the measure of ecological integrity) was computed following the assumptions that high predicted macro-invertebrate richness and high guilds habitat values were linked to a high ecological integrity. An emphasis on the hydro peaking effect in relation with river morphology was performed on macroinvertebrates. They were found to respond well to hydrological and morphological changes induced by river development projects while the approach by fish habitat value encountered limitations in its applicability. Four

  8. Geomorphological, trophic and human influences on the bamboo coral Isidella elongata assemblages in the deep Mediterranean: To what extent does Isidella form habitat for fish and invertebrates?

    Science.gov (United States)

    Cartes, J. E.; LoIacono, C.; Mamouridis, V.; López-Pérez, C.; Rodríguez, P.

    2013-06-01

    We analyzed what are the best ecological conditions for megafauna associated with the bamboo coral Isidella elongata based on the geomorphological, physical and trophic information taken in 3 stations (St1, St2, St3) off the southern Catalonian coasts at 620 m depth in June 2011. Results were compared with assemblage compositions recorded in past cruises (May 1992, 1994) at the same 3 stations. St1 was in a fishing ground exploited since the 1940s over a relatively wide slope at ca. 22 km from the nearest canyon head; St2 and St3 were on a narrower slope closer to canyon heads and to the Ebro river mouth than St1. I. elongata had formed (to May 1994, at least) a dense coral forest at St2-St3 (to ca. 255 colonies/ha at St3), and some isolated colonies (to ca. 0.9 colonies/ha) were still collected in 2011. Fish and invertebrate communities significantly differed between St1 and St2/St3, with two macrourid fishes (Trachrhynchus trachyrhynchus and Nezumia aequalis) and two decapods (Plesionika martia and Plesionika acanthonotus) more abundant at St2/St3. The following ecological indicators imply better food conditions for megafauna at St2-St3 and for I. elongata itself: (i) greater density of zooplankton (copepods, euphausiids, and others) as potential prey for planktivores (including I. elongata); (ii) greater biomass and mean weight of epifaunal and infaunal deposit feeders; (iii) higher feeding intensity, F, at St3 for benthos feeders (Phycis blennoides, N. aequalis and Aristeus antennatus). Also, at St2-St3 we found higher near-bottom turbidity (indicating particle resuspension: food for suspension feeders) and finer and more reduced (Eh) sediments. The results let us suggest that corals and accompanying fauna preferently found optimal ecological conditions in the same habitat, while habitat-forming capacity by I. elongata seemed weak to generate these conditions. Coral forests may enhance detritus accumulations around them, improving habitat conditions for benthos

  9. Habitat Evaluation Procedures (HEP) Report : Ladd Marsh, 2001 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Oregon Department of Fish and Wildlife

    2001-10-01

    Since the mid-1980s, the Oregon Department of Fish and Wildlife (ODFW) has been participating in the Bonneville Power Administration's (BPA's) efforts to mitigate for the negative impacts to fish and wildlife resulting from the development and operation of the 7 Columbia Basin Federal Hydropower System. BPA's mitigation obligations were formally recognized and mandated by the Northwest Power Act of 1980 and are guided by the Northwest Power Planning Council's (NWPPC's) Columbia Basin Fish and Wildlife Program. BPA funds fish and wildlife projects throughout the Basin to meet the habitat and population restorative goals and objectives outlined in the NWPPC's Fish and Wildlife Program and to fulfill its mitigation responsibilities under the Power Act. Impacts to wildlife resulting from hydrofacility construction/inundation were estimated using Habitat Evaluation Procedures (HEP) in the mid and late 1980s and are documented in BPA' s Wildlife Loss Assessments (Rasmussen and Wright 1990,a,b,c,d) and in the U.S. Army Corps of Engineers Lower Snake River Wildlife Habitat Compensation Evaluation (ACOE 1991). The loss assessments provided estimates of lost habitat quality and quantity for the target species selected to represent the habitat cover types impacted by hydropower construction/inundation. The NWPPC incorporated these losses into their Fish and Wildlife Program, recognizing them as the unannualized losses attributable to the construction/inundation of the federal hydropower system (NWPPC 1995 and 2000, Table 1 1-4). The HEP methodology is used by wildlife managers within the Columbia Basin to determine habitat values, expressed as Habitat Units, gained through BPA-funded mitigation project work. ODFW and the other Oregon wildlife managers (i.e., U.S. Fish and Wildlife Service, Confederated Tribes of the Warms Springs Reservation of Oregon, Burns Paiute Tribe, and Confederated Tribes of the Umatilla Indian Reservation [CTUIR

  10. Fish population and habitat analysis in Buck Creek, Washington, prior to recolonization by anadromous salmonids after the removal of Condit Dam

    Science.gov (United States)

    Allen, M. Brady; Burkhardt, Jeanette; Munz, Carrie; Connolly, Patrick J.

    2012-01-01

    We assessed the physical and biotic conditions in the part of Buck Creek, Washington, potentially accessible to anadromous fishes. This creek is a major tributary to the White Salmon River upstream of Condit Dam, which was breached in October 2011. Habitat and fish populations were characterized in four stream reaches. Reach breaks were based on stream gradient, water withdrawals, and fish barriers. Buck Creek generally was confined, with a single straight channel and low sinuosity. Boulders and cobble were the dominant stream substrate, with limited gravel available for spawning. Large-cobble riffles were 83 percent of the available fish habitat. Pools, comprising 15 percent of the surface area, mostly were formed by bedrock with little instream cover and low complexity. Instream wood averaged 6—10 pieces per 100 meters, 80 percent of which was less than 50 centimeters in diameter. Water temperature in Buck Creek rarely exceeded 16 degrees Celsius and did so for only 1 day at river kilometer (rkm) 3 and 11 days at rkm 0.2 in late July and early August 2009. The maximum temperature recorded was 17.2 degrees Celsius at rkm 0.2 on August 2, 2009. Minimum summer discharge in Buck Creek was 3.3 cubic feet per second downstream of an irrigation diversion (rkm 3.1) and 7.7 cubic feet per second at its confluence with the White Salmon River. Rainbow trout (Oncorhynchus mykiss) was the dominant fish species in all reaches. The abundance of age-1 or older rainbow trout was similar between reaches. However, in 2009 and 2010, the greatest abundance of age-0 rainbow trout (8 fish per meter) was in the most downstream reach. These analyses in Buck Creek are important for understanding the factors that may limit fish abundance and productivity, and they will help identify and prioritize potential restoration actions. The data collected constitute baseline information of pre-dam removal conditions that will allow assessment of changes in fish populations now that Condit Dam has

  11. Microphytobenthos sustain fish food webs in intertidal arid habitats: A comparison between mangrove-lined and un-vegetated creeks in the Persian Gulf

    Science.gov (United States)

    Shahraki, M.; Fry, B.; Krumme, U.; Rixen, T.

    2014-08-01

    The dietary importance of mangroves for fish production often seems to be minor. However, robust comparisons of fish food webs at mangrove vs. non-mangrove sites are largely lacking. We analyzed stable carbon (δ13C) and nitrogen (δ15N) isotope values of dominant fishes (in terms of abundance) and their potential food sources in summer and winter from arid mangrove-lined and un-vegetated intertidal creeks in Qeshm Island, Persian Gulf, Northern Indian Ocean (26.8°N, 55.75°E). Detritivores Liza klunzingeri (47%) and Anodontostoma chacunda (34%) dominated the abundance at the un-vegetated site; at the mangrove site L. klunzingeri (41%) also dominated, while the zooplanktivores Leiognathus daura (18%), Thryssa vitrirostris (8%) and macrobenthivores Pentaprion longimanus (10%), Acanthopagrus latus (4%) also contributed. There was high dietary reliance by fish on food items associated with non-mangrove sources as indicated by 2 source mixing models. Mangrove-derived organic matter contributed a maximum of 36% to the fish tissue whereas organic matter produced by microphytobenthos and plankton played a major role in the diet of the most abundant fish species with contributions of 64-100%. Two trophic pathways, a pelagic pathway and a benthic pathway, were present in the fish food webs at both sites. The pelagic and benthic food sources of the un-vegetated site were 13C-enriched, consistent with stronger contributions of abundant benthic cyanobacteria found within that food web. Spatial δ13C variation of microphytobenthos and plankton was also reflected in the δ13C values of the feeding guilds and some fish species, suggesting that fish were relatively resident at each site. The isotope values of most food sources and fish did not differ significantly between seasons. Overall, regardless of habitat type and season, microphytobenthos and plankton largely sustained fishes in this region while mangroves, where present, were of minor importance. Our results suggest both

  12. Environmental contaminants in fish and their associated risk to piscivorous wildlife in the Yukon River Basin, Alaska

    Science.gov (United States)

    Hinck, J.E.; Schmitt, C.J.; Echols, K.R.; May, T.W.; Orazio, C.E.; Tillitt, D.E.

    2006-01-01

    Organochlorine chemical residues and elemental contaminants were measured in northern pike (Esox lucius), longnose sucker (Catostomus catostomus), and burbot (Lota lota) from 10 sites in the Yukon River Basin (YRB) during 2002. Contaminant concentrations were compared to historical YRB data and to toxicity thresholds for fish and piscivorous wildlife from the scientific literature. A risk analysis was conducted to screen for potential hazards to piscivorous wildlife for contaminants that exceeded literature-based toxicity thresholds. Concentrations of total DDT (sum of p,p???-homologs; 1.09-13.6 ng/g), total chlordane (0.67-7.5 ng/g), dieldrin (growth and reproduction in YRB fish. Concentrations of mercury (0.08-0.65 ??g/g), selenium (0.23-0.85 ??g/g), and zinc (11-56 ??g/g) exceeded toxicity thresholds in one or more samples and were included in the risk analysis for piscivorous wildlife. No effect hazard concentrations (NEHCs) and low effect hazard concentrations (LEHCs), derived from literature-based toxicity reference values and avian and mammalian life history parameters, were calculated for mercury, selenium, and zinc. Mercury concentrations in YRB fish exceeded the NEHCs for all bird and small mammal models, which indicated that mercury concentrations in fish may represent a risk to piscivorous wildlife throughout the YRB. Low risk to piscivorous wildlife was associated with selenium and zinc concentrations in YRB fish. Selenium and zinc concentrations exceeded the NEHCs and LEHCs for only the small bird model. These results indicate that mercury should continue to be monitored and assessed in Alaskan fish and wildlife. ?? 2006 Springer Science+Business Media, Inc.

  13. Fish breeding and habitat

    Digital Repository Service at National Institute of Oceanography (India)

    Ramaiah, N.

    stream_size 2 stream_content_type text/plain stream_name Biodiversity_Western_Ghats_Inf_Kit_1994_3.11_1.pdf.txt stream_source_info Biodiversity_Western_Ghats_Inf_Kit_1994_3.11_1.pdf.txt Content-Encoding ISO-8859-1 Content...

  14. Organochlorine compounds and trace elements in fish tissue and bed sediments in the lower Snake River basin, Idaho and Oregon

    Science.gov (United States)

    Clark, Gregory M.; Maret, Terry R.

    1998-01-01

    Fish-tissue and bed-sediment samples were collected to determine the occurrence and distribution of organochlorine compounds and trace elements in the lower Snake River Basin. Whole-body composite samples of suckers and carp from seven sites were analyzed for organochlorine compounds; liver samples were analyzed for trace elements. Fillets from selected sportfish were analyzed for organochlorine compounds and trace elements. Bed-sediment samples from three sites were analyzed for organochlorine compounds and trace elements. Twelve different organochlorine compounds were detected in 14 fish-tissue samples. All fish-tissue samples contained DDT or its metabolites. Concentrations of total DDT ranged from 11 micrograms per kilogram wet weight in fillets of yellow perch from C.J. Strike Reservoir to 3,633 micrograms per kilogram wet weight in a whole-body sample of carp from Brownlee Reservoir at Burnt River. Total DDT concentrations in whole-body samples of sucker and carp from the Snake River at C.J. Strike Reservoir, Snake River at Swan Falls, Snake River at Nyssa, and Brownlee Reservoir at Burnt River exceeded criteria established for the protection of fish-eating wildlife. Total PCB concentrations in a whole-body sample of carp from Brownlee Reservoir at Burnt River also exceeded fish-eating wildlife criteria. Concentrations of organochlorine compounds in whole-body samples, in general, were larger than concentrations in sportfish fillets. However, concentrations of dieldrin and total DDT in fillets of channel catfish from the Snake River at Nyssa and Brownlee Reservoir at Burnt River, and concentrations of total DDT in fillets of smallmouth bass and white crappie from Brownlee Reservoir at Burnt River exceeded a cancer risk screening value of 10-6 established by the U.S. Environmental Protection Agency. Concentrations of organochlorine compounds in bed sediment were smaller than concentrations in fish tissue. Concentrations of p,p'DDE, the only compound detected

  15. Contamination of fresh water fish “Schizothorax niger” with chlorpyrifos from “Dal Lake” basins, India

    Directory of Open Access Journals (Sweden)

    Banday Muddasir

    2012-12-01

    Full Text Available Dal Lake a Sub-Himalyan urban Lake is one of the most beautiful lakes of India and second largest in Jammu & Kashmir. Intensive farming practiced in the surrounding area of Dal Lake and its floating gardensleads to an enhanced vulnerability of crops to pests and indiscriminate use of pesticides. Possible transfer of these hazardous molecules from vegetable fields to the aquatic environment of the Lake, poses a potential threat to the aquatic species and human health as well. In the present investigation conducted from 2008 to 2010, 135 samples of fish including 81 samples of schizothorax niger ( Algaad / Kasheer Gaad and 54 samples of Cyprinus carpii (Punjab Gaad were collected from three basins of Dal Lake namely Hazratbal, Nigeen and Cheshmashahi basin. The samples were analyzed for seven commonly used pesticides viz. Butachlor, γHCH,Chlorpyrifos, Hexaconazole, Endosulfan 1, Endosulfan 2 and Dichlorvas. Detection and quantification of pesticide residues was performed by GC-MS/MS (Thermofinnigan Polaris Q type equipped with Ni ECD. It was found that 73 samples (54.07% out of 135 were contaminated with chlorpyrifos an organophosphate pesticide with mean concentration of (0.0009 ± 0.0010ng/kg with concentration ranging from undetected to 0.003ng/kg. The highest concentration was found in Hazratbal basin in 2009 (0.002 ± 0.001ng/kg. The results also reveal that level of pesticide was higher in pesticide use season than non use season except in 2009 when levels were same. With respect to basins the results show that mean concentration of chlorpyrifos level was higher in pesticide application season than non application season except in Nigeen basin in 2008 and 2009 where levels were same (0.001±0.001ng/kg and in Hazratbal basin in 2010 where levels were same (0.001±0.001ng/kg. The results indicate a sub acute exposure of chlorpyrifos in a locally consumed Schizothorax niger and not in Cyprinus carpii. These findings suggest that low dose

  16. Dietary habits of invasive Ponto-Caspian gobies in the Croatian part of the Danube River basin and their potential impact on benthic fish communities.

    Science.gov (United States)

    Piria, Marina; Jakšić, Goran; Jakovlić, Ivan; Treer, Tomislav

    2016-01-01

    Invasive Ponto-Caspian (P-C(1)) gobies have recently caused dramatic changes in fish assemblage structures throughout the Danube basin. While their presence in the Croatian part of the basin has been noted and distribution studied, their dietary habits and impacts on native fish communities have, until now, been unknown. In 2011, 17 locations in the Sava River Basin were sampled for fish and 15 for benthic invertebrates. Fish population monitoring data, available for nine seasons (2003-2006 and 2010-2014) and 12 locations, were used to analyse the impacts of P-C gobies on benthic fish abundance. Gut content analysis indicates that the monkey goby Neogobius fluviatilis diet is very diverse, but dominated by Trichoptera, Chironomidae, Bivalvia and Odonata. The diet overlaps considerably with the round goby Neogobius melanostomus diet, although Gastropoda are dominant in the latter's diet. Small fish and Gammarus sp. dominate the bighead goby Ponticola kessleri diet. Comparison of gut content with the prey available in the environment indicates that monkey and round gobies exhibit preference for Trichoptera, Megaloptera and Coleoptera, and bighead goby for Trichoptera, Gammarus sp. and Pisces. P-C gobies in the Sava River are spreading upstream, towards the reaches with lower fish diversity. Analyses indicate potentially positive impacts of P-C gobies' presence on some fish populations: round and bighead goby on Balkan golden loach Sabanejewia balcanica and monkey goby on common carp Cyprinus carpio, crucian carp Carassius carassius, burbot Lota lota and Balkan loach Cobitis elongata. However, there are also indications that bighead and round goby could adversely impact the native chub Squalius cephalus and zingel Zingel zingel populations, respectively. As P-C gobies are still in the expansionary period of invasion and the ecosystem still adapting to new circumstances, continued monitoring of fish population dynamics in the Sava basin is needed to determine the

  17. Integrative taxonomy supports new candidate fish species in a poorly studied neotropical region: the Jequitinhonha River Basin.

    Science.gov (United States)

    Pugedo, Marina Lages; de Andrade Neto, Francisco Ricardo; Pessali, Tiago Casarim; Birindelli, José Luís Olivan; Carvalho, Daniel Cardoso

    2016-06-01

    Molecular identification through DNA barcoding has been proposed as a way to standardize a global biodiversity identification system using a partial sequence of the mitochondrial COI gene. We applied an integrative approach using DNA barcoding and traditional morphology-based bioassessment to identify fish from a neotropical region possessing low taxonomic knowledge: the Jequitinhonha River Basin (Southeastern Brazil). The Jequitinhonha River Basin (JRB) has a high rate of endemism and is considered an area of high priority for fish conservation, with estimates indicating the presence of around 110 native and non-indigenous species. DNA barcodes were obtained from 260 individuals belonging to 52 species distributed among 35 genera, 21 families and 6 orders, including threatened and rare species such as Rhamdia jequitinhonha and Steindachneridion amblyurum. The mean Kimura two-parameter genetic distances within species, genera and families were: 0.44, 12.16 and 20.58 %, respectively. Mean intraspecific genetic variation ranged from 0 to 11.43 %, and high values (>2 %) were recovered for five species. Species with a deep intraspecific distance, possibly flagging overlooked taxa, were detected within the genus Pimelodella. Fifteen species, only identified to the genus level, had unique BINs, with a nearest neighbor distance over 2 % and therefore, potential new candidate species supported by DNA barcoding. The integrative taxonomy approach using DNA barcoding and traditional taxonomy may be a remedy to taxonomy impediment, accelerating species identification by flagging potential new candidate species and to adequately conserve the megadiverse neotropical ichthyofauna.

  18. 太湖流域宜兴片河流生境质量评价%Assessment of river habitat quality in Yixing district of Taihu Lake basin

    Institute of Scientific and Technical Information of China (English)

    刘华; 蔡颖; 於梦秋; 龚蕾婷; 安树青

    2012-01-01

    建立包含河道生境、河岸生境和滨岸带生境3方面共10项的河流生境质量评价指标体系,对太湖流域宜兴片42个样点进行生境评价及空间差异比较,分析不同土地利用类型下河流生境各参数的差异性,探讨河流生境质量指数与富营养化综合指数的相关关系.结果表明:河流生境质量指数分值介于29 ~ 79,31.0%样点生境质量处于较差和很差等级,57.1%样点为一般等级,表明整体上生境退化明显;南部丘陵山区河流的生境质量状况好于广大的平原河网区;不同土地利用类型下河流生境质量差异显著,林地区域的生境质量明显好于耕地和建设用地;河流生境质量指数与富营养化综合指数显著负相关,说明水质状况对河流生境质量具有较大贡献.%In this paper, an assessment system including ten indices of river habitat quality for three different habitats (channel, bank, and riparian habitats) was established to assess the habitat quality and compare its spatial difference at 42 sites of Yixing district in Taihu Lake basin, and analyzed the differences of the river habitat parameters under different land use types as well as the correlation between river habitat quality index and eutrophication. The scores of the river habitat quality index at the study sites ranged from 29 to 79. 31. 0% of the sites had a poor or very poor habitat quality, and 57. 1% had a fair habitat quality, indicating the obvious habitat degradation in the whole district. The river habitat quality was better in southern hilly area than in vast plain river area. There existed significant differences in the river habitat quality under different land use types, being much better in woodland than in farmland and construction land. The river habitat quality index had significant negative correlation with eutrophication, suggesting the considerable contribution of water quality to river habitat quality.

  19. Broad-scale sampling of primary freshwater fish populations reveals the role of intrinsic traits, inter-basin connectivity, drainage area and latitude on shaping contemporary patterns of genetic diversity.

    Science.gov (United States)

    Sousa-Santos, Carla; Robalo, Joana I; Pereira, Ana M; Branco, Paulo; Santos, José Maria; Ferreira, Maria Teresa; Sousa, Mónica; Doadrio, Ignacio

    2016-01-01

    Background. Worldwide predictions suggest that up to 75% of the freshwater fish species occurring in rivers with reduced discharge could be extinct by 2070 due to the combined effect of climate change and water abstraction. The Mediterranean region is considered to be a hotspot of freshwater fish diversity but also one of the regions where the effects of climate change will be more severe. Iberian cyprinids are currently highly endangered, with over 68% of the species raising some level of conservation concern. Methods. During the FISHATLAS project, the Portuguese hydrographical network was extensively covered (all the 34 river basins and 47 sub-basins) in order to contribute with valuable data on the genetic diversity distribution patterns of native cyprinid species. A total of 188 populations belonging to 16 cyprinid species of Squalius, Luciobarbus, Achondrostoma, Iberochondrostoma, Anaecypris and Pseudochondrostoma were characterized, for a total of 3,678 cytochrome b gene sequences. Results. When the genetic diversity of these populations was mapped, it highlighted differences among populations from the same species and between species with identical distribution areas. Factors shaping the contemporary patterns of genetic diversity were explored and the results revealed the role of latitude, inter-basin connectivity, migratory behaviour, species maximum size, species range and other species intrinsic traits in determining the genetic diversity of sampled populations. Contrastingly, drainage area and hydrological regime (permanent vs. temporary) seem to have no significant effect on genetic diversity. Species intrinsic traits, maximum size attained, inter-basin connectivity and latitude explained over 30% of the haplotype diversity variance and, generally, the levels of diversity were significantly higher for smaller sized species, from connected and southerly river basins. Discussion. Targeting multiple co-distributed species of primary freshwater fish allowed

  20. Impacts of golden alga Prymnesium parvum on fish populations in reservoirs of the upper Colorado River and Brazos River basins, Texas

    Science.gov (United States)

    VanLandeghem, Matthew M.; Farooqi, Mukhtar; Farquhar, B.; Patino, Reynaldo

    2013-01-01

    Several reservoirs in the upper Colorado River and Brazos River basins in Texas have experienced toxic blooms of golden alga Prymnesium parvum and associated fish kills since 2001. There is a paucity of information, however, regarding the population-level effects of such kills in large reservoirs, species-specific resistance to or recovery from kills, or potential differences in the patterns of impacts among basins. We used multiple before-after, control-impact analysis to determine whether repeated golden alga blooms have led to declines in the relative abundance and size structure of fish populations. Sustained declines were noted for 9 of 12 fish species surveyed in the upper Colorado River, whereas only one of eight species was impacted by golden alga in the Brazos River. In the upper Colorado River, White Bass Morone chrysops, White Crappie Pomoxis annularis, Largemouth Bass Micropterus salmoides, Bluegill Lepomis macrochirus, River Carpsucker Carpiodes carpio, Freshwater Drum Aplodinotus grunniens, Channel Catfish Ictalurus punctatus, Flathead Catfish Pylodictis olivaris, and Blue Catfish I. furcatus exhibited sustained declines in relative abundance, size structure, or both; Gizzard Shad Dorosoma cepedianum, Longnose Gar Lepisosteus osseus, and Common Carp Cyprinus carpio did not exhibit those declines. In the Brazos River, only the relative abundance of Blue Catfish was impacted. Overall, toxic golden alga blooms can negatively impact fish populations over the long-term, but the patterns of impact can vary considerably among river basins and species. In the Brazos River, populations of most fish species appear to be healthy, suggesting a positive angling outlook for this basin. In the upper Colorado River, fish populations have been severely impacted, and angling opportunities have been reduced. Basin-specific management plans aimed at improving water quality and quantity will likely reduce bloom intensity and allow recovery of fish populations to the

  1. Diversity and habitat preference of aquatic insects along the longitudinal gradient of the Macaé River basin, Rio de Janeiro, Brazil

    OpenAIRE

    Baptista, D.F.; D. F. BUSS; L. F. M. DORVILLÉ; NESSIMIAN J. L.

    2001-01-01

    Diversity and habitat preference of macroinvertebrates were studied in Macaé River basin, Rio de Janeiro State, Brazil, along its longitudinal gradient. We selected stream reaches corresponding to 1st, 2nd, 4th, 5th and 6th orders. A Surber sampler was used to collect four macroinvertebrates samples of each substrate (sand, litter in pool areas, stones, and litter in riffle areas) during the three sampling periods, defined based on the rain regime: April (end of the rainy season), July (dry s...

  2. Biodiversity and conservation status of fish of Ceyhan River basin in Osmaniye, Turkey

    Directory of Open Access Journals (Sweden)

    Mahmut Dağlı

    2015-11-01

    The conservation measures suggested in this river basin must include strict regulation and control over removal of sand, controlling pollution and minimizing the threats caused by the increasing number of exotic species.

  3. Role of fish farm fouling in recolonisation of nearby soft-bottom habitats affected by coastal aquaculture

    OpenAIRE

    Fernandez-Gonzalez, Victoria; Martinez-Garcia, Elena; Sanchez-Jerez, Pablo

    2016-01-01

    Organic loading from fish farming constitutes a significant disturbance to marine sediment, normally reducing species abundance and richness and creating disturbed patches in soft-bottom communities. In contrast, floating fish farms harbour a high abundance of invertebrates associated with fouling communities, particularly amphipods. Changes in macrofaunal recolonisation induced by fish farms were researched using amphipod assemblages as a useful representative group. The objectives of this e...

  4. Bioaccumulation of methylmercury in fish tissue from the Roosevelt River, Southwestern Amazon basin

    OpenAIRE

    Marcelo Rodrigues dos Anjos; Nadja Gomes Machado; Maria Eliana Peixoto da Silva; Wanderley Rodrigues Bastos; Márcio Rodrigues Miranda; Dario Pires Carvalho; Marília Higino Mussy; Igor Bruno Barbosa de Holanda; Marcelo Sacardi Biudes; João Ânderson Fulan

    2016-01-01

    Mercury is a major pollutant in the Amazon River system, and its levels in fish and human hair are usually above the limit recommended by health agencies. The objective of this study was to analyze the methylmercury (MeHg) concentration in fish tissue from the Roosevelt River. The river's water velocity, depth, pH, temperature, electrical conductivity, dissolved oxygen and substrate type were measured, and fifty specimens distributed in 14 fish species were collected. A total of 64.3% of the ...

  5. Diet shift of Red Belly Pacu Piaractus brachypomus (Cuvier, 1818) (Characiformes: Serrasalmidae), a Neotropical fish, in the Sepik-Ramu River Basin, Papua New Guinea

    OpenAIRE

    Sandra Bibiana Correa; Ricardo Betancur-R.; Bernard de Mérona; Armbruster, Jonathan W.

    2014-01-01

    Introduction of fish species is a globally widespread practice that causes losses of native species and homogenization of diversity within and across continents. Diet assessments are important tools to depict the ecological function of species introduced into novel ecosystem and possible direct and indirect ecological effects. In this study, we compare the diet of Piaractus brachypomus, a mainly frugivorous Neotropical fish, introduced into the Sepik-Ramu River Basin (Papua New Guinea) nearly...

  6. Review of habitat classification schemes appropriate to streams, rivers, and connecting channels in the Great Lakes drainage system

    Science.gov (United States)

    Hudson, Patrick L.; Griffiths, R.W.; Wheaton, T.J.

    1992-01-01

    Studies of lotic classification, zonation, and distribution carried out since the turn of the century were reviewed for their use in developing a habitat classification scheme for flowing water in the Great Lakes drainage basin. Seventy papers, dealing mainly with fish but including benthos, were organized into four somewhat distinct groups. A heirarchical scale of habitat measurements is suggested, and sources of data and inventory methods, including statistical treatment, are reviewed. An outline is also provided for developing a classification system for riverine habitat in the Great Lakes drainage basin.

  7. WATER QUALITY EVALUATION IN THE FEE-FISHING LOCATED IN CORUMBATAI RIVER BASIN, SP (BRAZIL) = AVALIAÇÃO DA QUALIDADE DA ÁGUA DOS PESQUE-PAGUE LOCALIZADOS NA BACIA DO RIO CORUMBATAÍ, SP (BRASIL)

    OpenAIRE

    Eleni Nadai Malagutti; Alexandre Augusto Oliveira Santos; Ítalo Macedo Silva; Sâmia Maria Tauk-Tornisielo

    2012-01-01

    The fee-fishing are comprised of ponds, where fish are raised used in sport fishing. In ponds, the stocking of fish may deteriorate the water quality with the enrichment of nutrients from feed, fertilizer and fish faeces and animals around. This study determined some of the biotic factors of effluent and surface water bodies directly related units fee-fishing. Initially it carried out a number of fee-fishing active in Corumbataí river basin. Subsequently, six fee-fishing were selected for mon...

  8. Landscape-scale Habitat Templates and Life Histories of Endangered and Invasive Fish Species in Large Rivers of the Mid-Continent USA (Invited)

    Science.gov (United States)

    Jacobson, R. B.; Braaten, P. J.; Chapman, D.; DeLonay, A. J.

    2013-12-01

    Many fish species migrate through river systems to complete their life cycles, occupying specific habitats during specific life stages. Regional geomorphology sets a template for their habitat-use patterns and ontogenetic development. In large rivers of the Mid-continent USA, understanding of relations of fish life histories to landscape-scale habitat templates informs recovery of endangered species and prevention of spread of invasive species. The endangered pallid sturgeon has evolved in the Missouri-Mississippi river system over 150 Ma. Its present-day distribution probably results from extensive drainage re-arrangements during the Pleistocene, followed by contemporary fragmentation. The reproductive and early life-stage needs of pallid sturgeon encompass hundreds of km, as adults migrate upstream to spawn and free embryos and larvae disperse downstream. Spawning requires coarse, hard substrate for incubation of adhesive eggs but adult pallid sturgeon are found predominately over sand, indicating that coarse substrate is a critical but transient habitat need. Once hatched, free-embryos initiate 9-17 days of downstream dispersal that distributes them over several hundreds of km. Lotic conditions at the dispersal terminus are required for survival. Persistent recruitment failure has been attributed to dams and channelization, which have fragmented migration and dispersal corridors, altered flow regimes, and diminished rearing habitats. Key elements of the natural history of this species remain poorly understood because adults are rare and difficult to observe, while the earliest life stages are nearly undetectable. Recent understanding has been accelerated using telemetry and hydroacoustics, but such assessments occur in altered systems and may not be indicative of natural behaviors. Restoration activities attempt - within considerable uncertainty -- to restore elements of the habitat template where they are needed. In comparison, invasive Asian carps have been

  9. Monitoring of wild fish health at selected sites in the Great Lakes Basin: methods and preliminary results

    Science.gov (United States)

    Blazer, Vicki; Mazik, Patricia M.; Iwanowicz, Luke R.; Braham, Ryan; Hahn, Cassidy; Walsh, Heather L.; Sperry, Adam

    2014-01-01

    During fall 2010 and spring 2011, a total of 119 brown bullhead (Ameiurus nebulosus), 136 white sucker (Catostomus commersoni), 73 smallmouth bass (Micropterus dolomieu), and 59 largemouth bass (M. salmoides) were collected from seven Great Lakes Basin Areas of Concern and one Reference Site. Comprehensive fish health assessments were conducted in order to document potential adverse affects from exposure to complex chemical mixtures. Fish were necropsied on site, blood samples obtained, pieces of liver, spleen, kidney, gill and any abnormalities placed in fixative for histopathology. Liver samples were saved for gene expression analysis and otoliths were removed for aging. A suite of fish health indicators was developed and implemented for site comparisons and to document seasonal effects and species differences in response to environmental conditions. Organism level (grossly visible lesions, condition factor), tissue level (microscopic pathology, organosomatic indices, micronuclei, and other nuclear abnormalities), plasma factors (reproductive steroid hormones, vitellogenin), and molecular (gene expression) indicators were included. This report describes the methods and preliminary results.

  10. Application of neural networks to prediction of fish diversity and salmonid production in the Lake Ontario basin

    Science.gov (United States)

    McKenna, James E.

    2005-01-01

    Diversity and fish productivity are important measures of the health and status of aquatic systems. Being able to predict the values of these indices as a function of environmental variables would be valuable to management. Diversity and productivity have been related to environmental conditions by multiple linear regression and discriminant analysis, but such methods have several shortcomings. In an effort to predict fish species diversity and estimate salmonid production for streams in the eastern basin of Lake Ontario, I constructed neural networks and trained them on a data set containing abiotic information and either fish diversity or juvenile salmonid abundance. Twenty percent of the original data were retained as a test data set and used in the training. The ability to extend these neural networks to conditions throughout the streams was tested with data not involved in the network training. The resulting neural networks were able to predict the number of salmonids with more than 84% accuracy and diversity with more than 73% accuracy, which was far superior to the performance of multiple regression. The networks also identified the environmental variables with the greatest predictive power, namely, those describing water movement, stream size, and water chemistry. Thirteen input variables were used to predict diversity and 17 to predict salmonid abundance.

  11. FBSAD Reef Fish-Habitat Quadrat Surveys at Hawaii Island (Big Island), Main Hawaiian Islands, 2005 (NODC Accession 0046935)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Habitat quadrats were surveyed at 8-13 m depths using shore-based transects swum at 3 longshore sites on the leeward coast (North and South Kohala districts) of the...

  12. Assessment of fishes, habitats, and fish passage at tide gates on Deer Island Slough and lower Tide Creek: 2009 project report

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Columbia Soil and Water Conservation District (Columbia SWCD) and Lower Columbia River Watershed Council (LCRWC) are leading efforts to engage natural resource...

  13. Washington Phase II Fish Diversion Screen Evaluations in the Yakima and Touchet River Basins, 2005-2006 Annual Reports.

    Energy Technology Data Exchange (ETDEWEB)

    Chamness, Mickie; Abernethy, C.; Tunnicliffe, Cherylyn (PNNL)

    2006-02-01

    In 2005, Pacific Northwest National Laboratory (PNNL) researchers evaluated 25 Phase II fish screen sites in the Yakima and Touchet river basins. Pacific Northwest National Laboratory performs these evaluations for Bonneville Power Administration (BPA) to determine whether the fish screening devices meet National Marine Fisheries Service (NMFS) criteria to promote safe and timely fish passage. Evaluations consist of measuring velocities in front of the screens, using an underwater camera to look at the condition and environment in front of the screens, and noting the general condition and operation of the sites. Results of the evaluations in 2005 include the following: (1) Most approach velocities met the NMFS criterion of less than or equal to 0.4 fps. Less than 13% of all approach measurements exceeded the criterion, and these occurred at 10 of the sites. Flat-plate screens had more problems than drum screens with high approach velocities. (2) Bypass velocities generally were greater than sweep velocities, but sweep velocities often did not increase toward the bypass. The latter condition could slow migration of fish through the facility. (3) Screen and seal materials generally were in good condition. (4) Automated cleaning brushes generally functioned properly; chains and other moving parts were typically well-greased and operative. (5) Washington Department of Fish and Wildlife (WDFW) and U.S. Bureau of Reclamation (USBR) generally operate and maintain fish screen facilities in a way that provides safe passage for juvenile fish. (6) In some instances, irrigators responsible for specific maintenance at their sites (e.g., debris removal) are not performing their tasks in a way that provides optimum operation of the fish screen facility. New ways need to be found to encourage them to maintain their facilities properly. (7) We recommend placing datasheets providing up-to-date operating criteria and design flows in each sites logbox. The datasheet should include

  14. Asotin Creek Instream Habitat Alteration Projects : Habitat Evaluation, Adult and Juvenile Habitat Utilization and Water Temperature Monitoring : 2001 Progress Report.

    Energy Technology Data Exchange (ETDEWEB)

    Bumgarner, Joseph D.

    2002-01-01

    projects to improve fish habitat. In 1998, the ACCD identified the need for a more detailed analysis of these instream projects to fully evaluate their effectiveness at improving fish habitat. Therefore, ACCD contracted with WDFW's Snake River Lab (SRL) to take pre- and post-construction measurements of the habitat (i.e., pools, LOD, width, depth) at each site, and to evaluate fish use within some of the altered sites. These results have been published annually as progress reports to the ACCD (Bumgarner et al. 1999, Wargo et al. 2000, and Bumgarner and Schuck 2001). The ACCD also contracted with the WDFW SRL to conduct other evaluation and monitoring in the stream such as: (1) conduct snorkel surveys at habitat alteration sites to document fish usage following construction, (2) deploy temperature monitors throughout the basin to document summer water temperatures, and (3) attempt to document adult fish utilization by documenting the number of steelhead redds associated with habitat altered areas. This report provides a summary of pre-construction measurements taken on three proposed Charley Creek habitat sites during 2001, two sites in main Asotin Creek, and one site in George Creek, a tributary that enters in the lower Asotin Creek basin. Further, it provides a comparison of measurements taken pre- and post-construction on three 1999 habitat sites taken two years later, but at similar river flows. It also presents data collected from snorkel surveys, redd counts, and temperature monitoring.

  15. Asotin Creek instream habitat alteration projects : habitat evaluation, adult and juvenile habitat utilization and water temperature monitoring : 2001 progress report

    International Nuclear Information System (INIS)

    projects to improve fish habitat. In 1998, the ACCD identified the need for a more detailed analysis of these instream projects to fully evaluate their effectiveness at improving fish habitat. Therefore, ACCD contracted with WDFW's Snake River Lab (SRL) to take pre- and post-construction measurements of the habitat (i.e., pools, LOD, width, depth) at each site, and to evaluate fish use within some of the altered sites. These results have been published annually as progress reports to the ACCD (Bumgarner et al. 1999, Wargo et al. 2000, and Bumgarner and Schuck 2001). The ACCD also contracted with the WDFW SRL to conduct other evaluation and monitoring in the stream such as: (1) conduct snorkel surveys at habitat alteration sites to document fish usage following construction, (2) deploy temperature monitors throughout the basin to document summer water temperatures, and (3) attempt to document adult fish utilization by documenting the number of steelhead redds associated with habitat altered areas. This report provides a summary of pre-construction measurements taken on three proposed Charley Creek habitat sites during 2001, two sites in main Asotin Creek, and one site in George Creek, a tributary that enters in the lower Asotin Creek basin. Further, it provides a comparison of measurements taken pre- and post-construction on three 1999 habitat sites taken two years later, but at similar river flows. It also presents data collected from snorkel surveys, redd counts, and temperature monitoring

  16. Bull Trout (Salvelinus Confluentus) Population and Habitat Surveys in the McKenzie and Middle Fork Willamette Basins, 2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Taylor, Greg

    2000-11-28

    Prior to 1978, Dolly Varden Salvelinus malma were classified into an anadromous and interior form. Cavender (1978) classified the interior form as a distinct species, Salvelinus confluentus, the bull trout. Bull trout are large char weighing up to 18 kg and growing to over one meter in length (Goetz 1989). They are distinguished by a broad flat head, large downward curving maxillaries that extend beyond the eye, a well developed fleshy knob and a notch in the lower terminus of the snout, and light colored spots normally smaller than the pupil of the eye (Cavender 1978). Bull trout are found throughout northwestern North America from lat. 41{sup o}N to lat. 60{sup o}N. In Oregon, bull trout were once distributed throughout 12 basins in the Klamath and Columbia River systems including the Clackamas, Santiam, McKenzie and Middle Fork Willamette sub-basins west of the Cascades (Buchanan et al. 1997). However, it is believed bull trout have been extirpated from west of the Cascades with the exception of the McKenzie sub-basin. Before 1963, bull trout in the McKenzie sub-basin were a contiguous population from the mouth to Tamolitch Falls. Following the construction of Cougar and Trail Bridge Reservoirs there are three isolated populations: (1) mainstem McKenzie and tributaries from the mouth to Trail Bridge Reservoir. (2) mainstem McKenzie and tributaries above Trail Bridge Reservoir to Tamolitch Falls. (3) South Fork McKenzie and tributaries above Cougar Reservoir. The study area includes the three aforementioned McKenzie populations, and the Middle Fork Willamette and tributaries above Hills Creek Reservoir. We monitored bull trout populations in the McKenzie and Middle Fork Willamette basins using a combination of sampling techniques including: spawning surveys, standard pool counts, juvenile trapping, radio tracking, electronic fish counters, and a modified Hankin and Reeves protocol to estimate juvenile abundance and density. In addition, we continued to

  17. Fishing

    Institute of Scientific and Technical Information of China (English)

    姜群山

    2002-01-01

    @@ Last Saturday my cousin (表兄) came to my home. We were very happy to see each other. We decided that the next day we went to fish. We got up very early that day. When we left home,the moon could still be seen in the sky.

  18. Spatial, temporal, and habitat-related variation in abundance of pelagic fishes in the Gulf of Mexico: potential implications of the deepwater horizon oil spill.

    Directory of Open Access Journals (Sweden)

    Jay R Rooker

    Full Text Available Time-series data collected over a four-year period were used to characterize patterns of abundance for pelagic fishes in the northern Gulf of Mexico (GoM before (2007-2009 and after (2010 the Deepwater Horizon oil spill. Four numerically dominant pelagic species (blackfin tuna, blue marlin, dolphinfish, and sailfish were included in our assessment, and larval density of each species was lower in 2010 than any of the three years prior to the oil spill, although larval abundance in 2010 was often statistically similar to other years surveyed. To assess potential overlap between suitable habitat of pelagic fish larvae and surface oil, generalized additive models (GAMs were developed to evaluate the influence of ocean conditions on the abundance of larvae from 2007-2009. Explanatory variables from GAMs were then linked to environmental data from 2010 to predict the probability of occurrence for each species. The spatial extent of surface oil overlapped with early life habitat of each species, possibly indicating that the availability of high quality habitat was affected by the DH oil spill. Shifts in the distribution of spawning adults is another factor known to influence the abundance of larvae, and the spatial occurrence of a model pelagic predator (blue marlin was characterized over the same four-year period using electronic tags. The spatial extent of oil coincided with areas used by adult blue marlin from 2007-2009, and the occurrence of blue marlin in areas impacted by the DH oil spill was lower in 2010 relative to pre-spill years.

  19. Science to support adaptive habitat management: Overton Bottoms North Unit, Big Muddy National Fish and Wildlife Refuge, Missouri [Volumes 1-6

    Science.gov (United States)

    Jacobson, Robert B.

    2006-01-01

    Extensive efforts are underway along the Lower Missouri River to rehabilitate ecosystem functions in the channel and flood plain. Considerable uncertainty inevitably accompanies ecosystem restoration efforts, indicating the benefits of an adaptive management approach in which management actions are treated as experiments, and results provide information to feed back into the management process. The Overton Bottoms North Unit of the Big Muddy National Fish and Wildlife Refuge is a part of the Missouri River Fish and Wildlife Habitat Mitigation Project. The dominant management action at the Overton Bottoms North Unit has been excavation of a side-channel chute to increase hydrologic connectivity and to enhance shallow, slow current-velocity habitat. The side-channel chute also promises to increase hydrologic gradients, and may serve to alter patterns of wetland inundation and vegetation community growth in undesired ways. The U.S. Geological Survey's Central Region Integrated Studies Program (CRISP) undertook interdisciplinary research at the Overton Bottoms North Unit in 2003 to address key areas of scientific uncertainty that were highly relevant to ongoing adaptive management of the site, and to the design of similar rehabilitation projects on the Lower Missouri River. This volume presents chapters documenting the surficial geologic, topographic, surface-water, and ground-water framework of the Overton Bottoms North Unit. Retrospective analysis of vegetation community trends over the last 10 years is used to evaluate vegetation responses to reconnection of the Overton Bottoms North Unit to the river channel. Quasi-experimental analysis of cottonwood growth rate variation along hydrologic gradients is used to evaluate sensitivity of terrestrial vegetation to development of aquatic habitats. The integrated, landscape-specific understanding derived from these studies illustrates the value of scientific information in design and management of rehabilitation projects.

  20. Habitat Evaluation Procedures (HEP) Report; Burlington Bottoms, Technical Report 1993-2003.

    Energy Technology Data Exchange (ETDEWEB)

    Beilke, Susan

    1993-08-01

    Burlington Bottoms, consisting of approximately 417 acres of riparian and wetland habitat, was purchased by the Bonneville Power Administration in November 1991. The site is located approximately 1/2 mile north of the Sauvie Island Bridge (T2N R1W Sections 20, 21), and is bound on the east side by Multnomah Channel and on the west side by the Burlington Northern Railroad right-of-way and U.S. Highway 30 (Figures 1 and 2). Wildlife habitat values resulting from the purchase of this site will contribute toward the goal of mitigating for habitat lost as outlined in the Columbia and Willamette River Basin's Fish and Wildlife Program and Amendments. Under this Program, mitigation goals were developed as a result of the loss of wildlife habitat due to the development and operation of Federal hydro-electric facilities in the Columbia and Willamette River Basins. In 1993, an interdisciplinary team was formed to develop and implement quantitative Habitat Evaluation Procedures (HEP) to document the value of various habitats at Burlington Bottoms. Results of the HEP will be used to: (1) determine the current status and habitat enhancement potential of the site consistent with wildlife mitigation goals and objectives; and (2) develop a management plan for the area. HEP participants included; Charlie Craig, BPA; Pat Wright, Larry Rasmussen, and Ron Garst, U. S. Fish and Wildlife Service; John Christy, The Nature Conservancy; and Doug Cottam, Sue Beilke, and Brad Rawls, Oregon Department of Fish and Wildlife.

  1. Role of Marsh-Mangrove Interface Habitats as Aquatic Refuges for Wetland Fishes and Other Aquatic Animals

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — We examined spatial and temporal dynamics in the fish community of ecotonal mangrove creeks along the Shark River Slough transect, particularly between SRS3 &...

  2. Modeling the impact of a hydropower reservoir on the habitat of a megaherbivore in the Black Volta Basin in Ghana, West Africa

    Science.gov (United States)

    Manful, Desmond

    2010-05-01

    The Black Volta watershed is approximately 134 000 km2 in size at the gauge at Bamboi. It is part of the main 414 000 km2 Volta system. The Volta river was dammed at Akosombo in 1965 resulting in the largest man-made lake in the world, the Volta Lake. The Bui dam is a new 400 MW scheme currently under development on the Black Volta River in the Bui national park in Ghana. The reservoir created by the Bui barrage is expected to impact (through inundation) the habitat of two species of hippos know to exist in the park, the Hippopotamus amphibius and the Choeropsis liberiensis. Computer-based models present a unique opportunity to assess quantitatively the impact of the new reservoir on the habitat of the target species in this case the H. amphibious. Until this undertaking, there were very few studies documenting the habitat of the H. amphibious let alone model it. The work and subsequent presentation will show the development of a habitat model for the Hippopotamus amphibius. The Habitat Information retrieval Program based on Streamflow Analysis, in short HIPStrA, is a one dimensional (1D) in-stream, spatially explicit hybrid construct that combines physico-chemical evidence and expert knowledge to forecast river habitat suitability (Hs) for the Hippopotamus amphibius. The version of the model presented is specifically developed to assess the impact of a reservoir created by a hydroelectric dam on potential dwelling areas in the Bui gorge for hippos. Accordingly, this version of HIPStrA simulates a special reservoir suitability index (Rsi), a metric that captures the "hippo friendliness" of any lake or reservoir. The impact of measured and simulated flood events as well as low flows, representing extreme events is also assessed. Recommendations are made for the operating rules of the reservoir in the post-construction phase of the dam. A great deal of work has been done on the effects of stream flow changes on fish especially salmonids. Very little work however has

  3. Influence of local and landscape characteristics on the distribution and diversity of fish assemblages of streams in the Ivinhema River basin, Upper Paraná River

    Directory of Open Access Journals (Sweden)

    Ana Paula Lemke

    2013-12-01

    Full Text Available OBJECTIVES: Among the most relevant issues in community ecology is the influence of different ways of addressing the pattern of diversity and distribution of species, and based on this, the present study sought to evaluate the influence of landscape and local characteristics on the richness and composition of fish assemblages in the Ivinhema River basin. METHOD: In the present study, we used data of distribution of fish species in 25 stretches of streams of the Ivinhema River basin, Upper Paraná River, aiming to know the role of local characteristics and land use on fish assemblages. RESULTS: We identified 113 fish species, and those sampled in a greater number of sites were: Astyanax altiparanae and Serrapinnus notomelas. The richness varied between 4 and 65 species. The regression tree allowed explaining 89.3% of richness variation, and permitted to identify that altitude is the main predictor of richness. According to the canonical correspondence analysis, variables that most influenced the species distribution were: altitude, depth, width, velocity, conductivity and percentage of built-up areas. CONCLUSIONS: Our results suggested that factors that most influenced fish assemblages in the Ivinhema River basin were physiographic and limnological characteristics, followed by land use.

  4. Natural Propagation and Habitat Improvement, Washington, Volume IIA, Tumwater Falls and Dryden Dam Fish Passage, 1983 Final Report.

    Energy Technology Data Exchange (ETDEWEB)

    Unknown Author

    1984-05-01

    This engineering feasibility and predesign report on the Tumwater Falls and Dryden Dam Fish Passage Project provides BPA with information for planning purposes and will serve as a discussion document for interested agencies. Tumwater Falls and Dryden Dams, both on the Wenatchee River, were built in the early 1900's as diversions for hydropower, and irrigation and hydropower, respectively. The present fishway facilities at both sites are inadequate to properly pass the anadromous fish runs in the Wenatchee River. These runs include spring and summer chinook salmon, sockeye salmon, coho salmon and steelhead trout. Predesign level drawings are provided in this report that represent fishway schemes capable of adequately passing present and projected fish runs. The effects of present passage facilities on anadromous fish stocks is addressed both quantitatively and qualitatively. The quantitative treatment assesses losses of adult migrants due to the structures and places an estimated value on those fish. The dollar figure is estimated to be between $391,000 and $701,000 per year for both structures. The qualitative approach to benefits deals with the concept of stock vigor, the need for passage improvements to help ensure the health of the anadromous fish stock. 29 references, 27 figures, 5 tables.

  5. Colorado River cutthroat habitat resistance and resilience to climate change

    OpenAIRE

    Olsen, Kate

    2013-01-01

    Colorado River cutthroat trout, Oncorhyncus clarki pleuriticus , occupy less than 12% of their historic range. Restoration and conservation of this species are currently under way across the upper Colorado River basin, but guidance to inform management decisions related to the impacts of climate change on cutthroat is lacking. Shifts in the thermal distribution of freshwater fish have been documented, and will continue to occur as cold water habitat is threatened by warming water temperatures...

  6. Quantifying restoration effectiveness using multi-scale habitat models: implications for sage-grouse in the Great Basin

    Science.gov (United States)

    Arkle, Robert S.; Pilliod, David S.; Hanser, Steven E.; Brooks, Matthew L.; Chambers, Jeanne C.; Grace, James B.; Knutson, Kevin C.; Pyke, David A.; Welty, Justin L.

    2014-01-01

    A recurrent challenge in the conservation of wide-ranging, imperiled species is understanding which habitats to protect and whether we are capable of restoring degraded landscapes. For Greater Sage-grouse (Centrocercus urophasianus), a species of conservation concern in the western United States, we approached this problem by developing multi-scale empirical models of occupancy in 211 randomly located plots within a 40 million ha portion of the species' range. We then used these models to predict sage-grouse habitat quality at 826 plots associated with 101 post-wildfire seeding projects implemented from 1990 to 2003. We also compared conditions at restoration sites to published habitat guidelines. Sage-grouse occupancy was positively related to plot- and landscape-level dwarf sagebrush (Artemisia arbuscula, A. nova, A. tripartita) and big sagebrush steppe prevalence, and negatively associated with non-native plants and human development. The predicted probability of sage-grouse occupancy at treated plots was low on average (0.09) and not substantially different from burned areas that had not been treated. Restoration sites with quality habitat tended to occur at higher elevation locations with low annual temperatures, high spring precipitation, and high plant diversity. Of 313 plots seeded after fire, none met all sagebrush guidelines for breeding habitats, but approximately 50% met understory guidelines, particularly for perennial grasses. This pattern was similar for summer habitat. Less than 2% of treated plots met winter habitat guidelines. Restoration actions did not increase the probability of burned areas meeting most guideline criteria. The probability of meeting guidelines was influenced by a latitudinal gradient, climate, and topography. Our results suggest that sage-grouse are relatively unlikely to use many burned areas within 20 years of fire, regardless of treatment. Understory habitat conditions are more likely to be adequate than overstory

  7. Native fish conservation areas: A vision for large-scale conservation of native fish communities

    Science.gov (United States)

    Williams, Jack E.; Williams, Richard N.; Thurow, Russell F.; Elwell, Leah; Philipp, David P.; Harris, Fred A.; Kershner, Jeffrey L.; Martinez, Patrick J.; Miller, Dirk; Reeves, Gordon H.; Frissell, Christopher A.; Sedell, James R.

    2011-01-01

    The status of freshwater fishes continues to decline despite substantial conservation efforts to reverse this trend and recover threatened and endangered aquatic species. Lack of success is partially due to working at smaller spatial scales and focusing on habitats and species that are already degraded. Protecting entire watersheds and aquatic communities, which we term "native fish conservation areas" (NFCAs), would complement existing conservation efforts by protecting intact aquatic communities while allowing compatible uses. Four critical elements need to be met within a NFCA: (1) maintain processes that create habitat complexity, diversity, and connectivity; (2) nurture all of the life history stages of the fishes being protected; (3) include a long-term enough watershed to provide long-term persistence of native fish populations; and (4) provide management that is sustainable over time. We describe how a network of protected watersheds could be created that would anchor aquatic conservation needs in river basins across the country.

  8. Bioaccumulation of selected metals in fresh water Haruan fish (Channastriatus collected from Pahang river basin, Malaysia

    Directory of Open Access Journals (Sweden)

    Jalal, K.C.A

    2014-01-01

    Full Text Available A study on Copper (Cu, Zinc (Zn and Lead(Pb concentration in fresh water fish Channastriatus -Haruan fish in Pahang, Malaysia was conducted. Three types of fish organs were studied. The organs were; liver, muscle and intestine. They were dissected and dried before the digestion process using HNO3, H2SO4, H2O2 and HCL. Inductively Coupled Plasma Spectrometry (ICP-MS was used for the detection of heavy metals. There was a significant variation in the concentration of zinc was observed between tissues of the studied fish (P< 0.05 while copper and lead showed no significant difference in accumulation between selected tissues. Nevertheless, the findings from this study revealed that all the heavy metals concentrations in the tissues were lower than the maximum permissible limit as recommended by The Malaysian Food Regulation and hence safe for human consumption. Long term monitoring study is needed to implement various fishery management plans to safeguard the quality of C. striatus wild stock.

  9. Temporal trends in algae, benthic invertebrate, and fish assemblages in streams and rivers draining basins of varying land use in the south-central United States, 1993-2007

    Science.gov (United States)

    Miller, Matthew P.; Kennen, Jonathan G.; Mabe, Jeffrey A.; Mize, Scott V.

    2012-01-01

    Site-specific temporal trends in algae, benthic invertebrate, and fish assemblages were investigated in 15 streams and rivers draining basins of varying land use in the south-central United States from 1993–2007. A multivariate approach was used to identify sites with statistically significant trends in aquatic assemblages which were then tested for correlations with assemblage metrics and abiotic environmental variables (climate, water quality, streamflow, and physical habitat). Significant temporal trends in one or more of the aquatic assemblages were identified at more than half (eight of 15) of the streams in the study. Assemblage metrics and abiotic environmental variables found to be significantly correlated with aquatic assemblages differed between land use categories. For example, algal assemblages at undeveloped sites were associated with physical habitat, while algal assemblages at more anthropogenically altered sites (agricultural and urban) were associated with nutrient and streamflow metrics. In urban stream sites results indicate that streamflow metrics may act as important controls on water quality conditions, as represented by aquatic assemblage metrics. The site-specific identification of biotic trends and abiotic–biotic relations presented here will provide valuable information that can inform interpretation of continued monitoring data and the design of future studies. In addition, the subsets of abiotic variables identified as potentially important drivers of change in aquatic assemblages provide policy makers and resource managers with information that will assist in the design and implementation of monitoring programs aimed at the protection of aquatic resources.

  10. Genetic analysis of five sedentary fish species in middle Laranjinha River (upper Paraná River basin): A case study.

    Science.gov (United States)

    Frantine-Silva, W; Ferreira, D G; Nascimento, R H C; Fracasso, J F; Conte, J E; Ramos, F P; Carvalho, S; Galindo, B A

    2015-01-01

    Most studies of diversity and genetic structure in neotropical fish have focused on commercial species from large rivers or their reservoirs. However, smaller tributaries have been identified as an important alternative migratory route, with independent pools of genetic diversity. In this context, the present study aimed to evaluate genetic diversity and structure in five neotropical fish species from a region of Laranjinha River in the upper Paraná River basin. PCR-RAPD (random amplified polymorphic DNA) markers were used to characterize around 40 individuals of each species distributed upstream and downstream of Corredeira Dam that interrupts the river. The descriptive index of genetic diversity (P = 30.5-82%; HE 0.122-0.312) showed that the populations have acceptable levels of genetic diversity. The values for Nei's genetic distance (DN min 0.0110 and max 0.0306) as well as the genetic structure index and the analysis of molecular variance (AMOVA, ϕST min 0.0132 and max 0.0385) demonstrated low, but significant levels of genetic structure. Bayesian analysis of assignment found two k clusters, including several individuals with mixed ancestry for all populations from the five species analyzed. These findings along with historical data on rainfall and the low dimensions of the dam studied here support the hypothesis that periodic floods enable the transit of individuals between different localities mitigating the differentiation process between populations. PMID:26782514

  11. Wetlands and Whooping Cranes: A Strategic Approach to Habitat Protection, Restoration, and Enhancement in Nebraska’s Rainwater Basin

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Acquisition of the Freda Wild tract will be a significant addition to the 80 acre Ritterbush WPA. Once completed Ritterbush WPA will be a 200 acre USFWS WPA with...

  12. Phase II Water Rental Pilot Project: Snake River Resident Fish and Wildlife Resources and Management Recommendations.

    Energy Technology Data Exchange (ETDEWEB)

    Stovall, Stacey H.

    1994-08-01

    The Idaho Water Rental Pilot Project was implemented in 1991 as part of the Non-Treaty Storage Fish and Wildlife Agreement between Bonneville Power Administration and the Columbia Basin Fish and Wildlife Authority. The goal of the project is to quantify resident fish and wildlife impacts resulting from salmon flow augmentation releases made from the upper Snake River Basin. Phase I summarized existing resource information and provided management recommendations to protect and enhance resident fish and wildlife habitat resulting from storage releases for the I improvement of an adromous fish migration. Phase II includes the following: (1) a summary of recent biological, legal, and political developments within the basin as they relate to water management issues, (2) a biological appraisal of the Snake River between American Falls Reservoir and the city of Blackfoot to examine the effects of flow fluctuation on fish and wildlife habitat, and (3) a preliminary accounting of 1993--1994 flow augmentation releases out of the upper Snake, Boise, and Payette river systems. Phase III will include the development of a model in which annual flow requests and resident fish and wildlife suitability information are interfaced with habitat time series analysis to provide an estimate of resident fish and wildlife resources.

  13. Spatial and temporal patterns of mercury concentrations in freshwater fish across the Western United States and Canada

    Science.gov (United States)

    Eagles-Smith, Collin A.; Ackerman, Josh; Willacker, James J.; Tate, Michael T.; Lutz, Michelle A; Fleck, Jacob; Stewart, Robin; Wiener, James G.; Evers, David C.; Lepak, Jesse M; Davis, Jay A; Pritz, Colleen Flanagan

    2016-01-01

    Methylmercury contamination of fish is a global threat to environmental health. Mercury (Hg) monitoring programs are valuable for generating data that can be compiled for spatially broad syntheses to identify emergent ecosystem properties that influence fish Hg bioaccumulation. Fish total Hg (THg) concentrations were evaluated across the Western United States (US) and Canada, a region defined by extreme gradients in habitat structure and water management. A database was compiled with THg concentrations in 96,310 fish that comprised 206 species from 4262 locations, and used to evaluate the spatial distribution of fish THg across the region and effects of species, foraging guilds, habitats, and ecoregions. Areas of elevated THg exposure were identified by developing a relativized estimate of fish mercury concentrations at a watershed scale that accounted for the variability associated with fish species, fish size, and site effects. THg concentrations in fish muscle ranged between 0.001 and 28.4 (μg/g wet weight (ww)) with a geometric mean of 0.17. Overall, 30% of individual fish samples and 17% of means by location exceeded the 0.30 μg/g ww US EPA fish tissue criterion. Fish THg concentrations differed among habitat types, with riverine habitats consistently higher than lacustrine habitats. Importantly, fish THg concentrations were not correlated with sediment THg concentrations at a watershed scale, but were weakly correlated with sediment MeHg concentrations, suggesting that factors influencing MeHg production may be more important than inorganic Hg loading for determining fish MeHg exposure. There was large heterogeneity in fish THg concentrations across the landscape; THg concentrations were generally higher in semi-arid and arid regions such as the Great Basin and Desert Southwest, than in temperate forests. Results suggest that fish mercury exposure is widespread throughout Western US and Canada, and that species, habitat type, and region play an important

  14. Sedimentology and hydrocarbon habitat of the submarine-fan deposits of the Central Carpathian Paleogene Basin (NE Slovakia)

    Energy Technology Data Exchange (ETDEWEB)

    Sotak, J. [Slovak Academy of Sciences, Banska Bystrica (Slovakia). Geological Institute; Pereszlenyi, M. [VVNP Research Oil Company for Exploration and Production, Bratislava (Slovakia); Marschalko, R.; Starek, D. [Slovak Academy of Sciences, Bratislava (Slovakia). Geological Institute; Milicka, J. [Comenius University, Bratislava (Slovakia). Dept. of Geochemistry

    2001-01-01

    The Central Carpathian Paleogene Basin accommodates a subsiding area of the destructive plate-margin. The basin history comprises marginal faulting and alluvial fan accumulation (E{sub 2}); transgressive onlap by shoreface sediments and carbonate platform deposits (E{sub 2}); glacio-eustatic regression induced by cooling (Terminal Eocene Event); forced regression, tectonic subsidence and growth-fault accumulation of basin-floor and slope fans (E{sub 3}); decelerating subsidence, aggradation and sea-level rising during the mud-rich deposition (O{sub 1}); high-magnitude drop in sea-level (Mid-Oligocene Event), retroarc backstep of depocenters and lowstand accumulation of sand-rich fans and suprafans (O{sub 2}-M{sub 1}); subduction-related shortening and basin inversion along the northern margins affected by backthrusting and transpressional deformation (O{sub 2}-M{sub 1}). The basin-fill sequence has poor (TOC {<=} 0.5%) to fair (TOC < 1.0%) quality of source rocks. Maturity of OM ranges from initial to relic stage of HC generation. Paleogene rock-extracts display a good correlation with scarce trapped oils. 'The presence of solid bitumens and HC-rich fluid inclusions indicates overpressure conditions during HC generation and migration. Potential HC reservoirs can be expected in porous lithologies (scarp breccias), in basement highs and traps related to backthrusting, fault-propagation folding and strike-slip tectonics. (author)

  15. Population and biological parameters of selected fish species from the middle Xingu River, Amazon Basin.

    Science.gov (United States)

    Camargo, M; Giarrizzo, T; Isaac, V J

    2015-08-01

    This study estimates the main biological parameters, including growth rates, asymptotic length, mortality, consumption by biomass, biological yield, and biomass, for the most abundant fish species found on the middle Xingu River, prior to the construction of the Belo Monte Dam. The specimens collected in experimental catches were analysed with empirical equations and length-based FISAT methods. For the 63 fish species studied, high growth rates (K) and high natural mortality (M) were related to early sexual maturation and low longevity. The predominance of species with short life cycles and a reduced number of age classes, determines high rates of stock turnover, which indicates high productivity for fisheries, and a low risk of overfishing.

  16. Karyotype similarity between two sympatric Schizodon fish species (Anostomidae, Characiformes) from the Paraguay River basin

    OpenAIRE

    Martins Cesar; Galetti Jr. Pedro Manoel

    1998-01-01

    Fish of the neotropical family Anostomidae generally show low karyotype variability. Nevertheless, karyotype variants have been identified within some genera, providing information about their evolutionary history. Species of the genus Schizodon show a high degree of morphological and ecological similarity compared to other anostomids. In the present study, karyotype characteristics of Schizodon borelli (40 individuals) and S. isognathum (one individual), two sympatric species found in the Pa...

  17. Waterfowl Production and Habitat Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Waterfowl Production and Habitat Survey, conducted by the U.S. Fish and Wildlife Service, became operational in 1955 in the Canadian prairies (strata 26-40). In...

  18. Large woody debris and salmonid habitat in the Anchor River basin, Alaska, following an extensive spruce beetle (Dendroctonus rufipennis) outbreak

    Science.gov (United States)

    A widespread and intense spruce beetle outbreak has killed most of the mature white spruce trees across many watersheds in south-central Alaska. To investigate the potential habitat impacts in a salmon stream, we characterized the current abundance and species composition of large woody debris (LWD...

  19. Dynamics of fish assemblages on a continuous rocky reef and adjacent unconsolidated habitats at Fernando de Noronha Archipelago, tropical western Atlantic

    Directory of Open Access Journals (Sweden)

    Paulo R. Medeiros

    2011-01-01

    Full Text Available In recent years, many studies investigated how density-dependent factors, such as shortages in microhabitat and food availability influence the structure of reef fish assemblages. Most of what is currently known, however, comes from comparisons of isolated patch reefs and from correlations between fish abundance and one or few microhabitat variables. In addition, most studies were done in the Caribbean and Indo-Pacific regions, whereas the South Atlantic region has been, to date, understudied. The present study evaluated spatial and temporal variations in reef fish abundance and species richness in a continuous rocky reef and adjacent unconsolidated habitats in a Southwestern Atlantic reef, using underwater techniques to assess both fish numbers and microhabitat variables (depth, rugosity, number of crevices and percent cover of live benthic organisms, bare rock, sand, and limestone. Higher species richness was observed at consolidated substratum stations on both sampling periods (May and October, but fish abundance did not show a significant spatial variation. Topographical complexity and percent cover of algae (except coralline algae were amongst the most important determinants of species richness, and correlations between fish size and refuge crevice size were observed. The non-random patterns of spatial variation in species richness, and to a lesser extent, fish abundance, were related to differences in substratum characteristics and the inherent characteristics of fishes (i.e. habitat preferences and not to geographical barriers restraining fish movement. This study highlights the importance of concomitantly assessing several microhabitat variables to determine their relative influence in