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Sample records for basic biological processes

  1. Basic digital signal processing

    CERN Document Server

    Lockhart, Gordon B

    1985-01-01

    Basic Digital Signal Processing describes the principles of digital signal processing and experiments with BASIC programs involving the fast Fourier theorem (FFT). The book reviews the fundamentals of the BASIC program, continuous and discrete time signals including analog signals, Fourier analysis, discrete Fourier transform, signal energy, power. The text also explains digital signal processing involving digital filters, linear time-variant systems, discrete time unit impulse, discrete-time convolution, and the alternative structure for second order infinite impulse response (IIR) sections.

  2. Basic radiotherapy physics and biology

    CERN Document Server

    Chang, David S; Das, Indra J; Mendonca, Marc S; Dynlacht, Joseph R

    2014-01-01

    This book is a concise and well-illustrated review of the physics and biology of radiation therapy intended for radiation oncology residents, radiation therapists, dosimetrists, and physicists. It presents topics that are included on the Radiation Therapy Physics and Biology examinations and is designed with the intent of presenting information in an easily digestible format with maximum retention in mind. The inclusion of mnemonics, rules of thumb, and reader-friendly illustrations throughout the book help to make difficult concepts easier to grasp. Basic Radiotherapy Physics and Biology is a

  3. Understanding a Basic Biological Process: Expert and Novice Models of Meiosis.

    Science.gov (United States)

    Kindfield, Ann C. H.

    The results of a study of the meiosis models utilized by individuals at varying levels of expertise while reasoning about the process of meiosis are presented. Based on these results, the issues of sources of misconceptions/difficulties and the construction of a sound understanding of meiosis are discussed. Five individuals from each of three…

  4. Basic biology in health physics

    International Nuclear Information System (INIS)

    This report describes the consequences of the interaction of ionizing radiation with living cells and tissues. The basic processes of living cells, which are relevant to an understanding of health physics problems, are outlined with particular reference to cell-death, cancer induction and genetic effects. (author)

  5. Mathematical modeling of biological processes

    CERN Document Server

    Friedman, Avner

    2014-01-01

    This book on mathematical modeling of biological processes includes a wide selection of biological topics that demonstrate the power of mathematics and computational codes in setting up biological processes with a rigorous and predictive framework. Topics include: enzyme dynamics, spread of disease, harvesting bacteria, competition among live species, neuronal oscillations, transport of neurofilaments in axon, cancer and cancer therapy, and granulomas. Complete with a description of the biological background and biological question that requires the use of mathematics, this book is developed for graduate students and advanced undergraduate students with only basic knowledge of ordinary differential equations and partial differential equations; background in biology is not required. Students will gain knowledge on how to program with MATLAB without previous programming experience and how to use codes in order to test biological hypothesis.

  6. Branching processes in biology

    CERN Document Server

    Kimmel, Marek

    2015-01-01

    This book provides a theoretical background of branching processes and discusses their biological applications. Branching processes are a well-developed and powerful set of tools in the field of applied probability. The range of applications considered includes molecular biology, cellular biology, human evolution and medicine. The branching processes discussed include Galton-Watson, Markov, Bellman-Harris, Multitype, and General Processes. As an aid to understanding specific examples, two introductory chapters, and two glossaries are included that provide background material in mathematics and in biology. The book will be of interest to scientists who work in quantitative modeling of biological systems, particularly probabilists, mathematical biologists, biostatisticians, cell biologists, molecular biologists, and bioinformaticians. The authors are a mathematician and cell biologist who have collaborated for more than a decade in the field of branching processes in biology for this new edition. This second ex...

  7. Fungal genome sequencing: basic biology to biotechnology.

    Science.gov (United States)

    Sharma, Krishna Kant

    2016-08-01

    The genome sequences provide a first glimpse into the genomic basis of the biological diversity of filamentous fungi and yeast. The genome sequence of the budding yeast, Saccharomyces cerevisiae, with a small genome size, unicellular growth, and rich history of genetic and molecular analyses was a milestone of early genomics in the 1990s. The subsequent completion of fission yeast, Schizosaccharomyces pombe and genetic model, Neurospora crassa initiated a revolution in the genomics of the fungal kingdom. In due course of time, a substantial number of fungal genomes have been sequenced and publicly released, representing the widest sampling of genomes from any eukaryotic kingdom. An ambitious genome-sequencing program provides a wealth of data on metabolic diversity within the fungal kingdom, thereby enhancing research into medical science, agriculture science, ecology, bioremediation, bioenergy, and the biotechnology industry. Fungal genomics have higher potential to positively affect human health, environmental health, and the planet's stored energy. With a significant increase in sequenced fungal genomes, the known diversity of genes encoding organic acids, antibiotics, enzymes, and their pathways has increased exponentially. Currently, over a hundred fungal genome sequences are publicly available; however, no inclusive review has been published. This review is an initiative to address the significance of the fungal genome-sequencing program and provides the road map for basic and applied research. PMID:25721271

  8. Poverty, Human Development, and Basic Biology

    OpenAIRE

    Gross, Liza

    2007-01-01

    Taking a slight departure from our normal fare, PLoS Biology features two articles with a special focus on poverty and human development: one explores the biological mechanisms of health inequalities; the second discusses the value of including local communities in biodiversity conservation.

  9. Basic mathematics for the biological and social sciences

    CERN Document Server

    Marriott, F H C

    2013-01-01

    Basic Mathematics for the Biological and Social Sciences deals with the applications of basic mathematics in the biological and social sciences. Mathematical concepts that are discussed in this book include graphical methods, differentiation, trigonometrical or circular functions, limits and convergence, integration, vectors, and differential equations. The exponential function and related functions are also considered. This monograph is comprised of 11 chapters and begins with an overview of basic algebra, followed by an introduction to infinitesimal calculus, scalar and vector quantities, co

  10. Nutritional biology: a neglected basic discipline of nutritional science.

    Science.gov (United States)

    Döring, Frank; Ströhle, Alexander

    2015-11-01

    On the basis of a scientific-philosophical analysis, this paper tries to show that the approaches in current nutritional science-including its subdisciplines which focus on molecular aspects-are predominantly application-oriented. This becomes particularly evident through a number of conceptual problems characterized by the triad of 'dearth of theoretical foundation,' 'particularist research questions,' and 'reductionist understanding of nutrition.' The thesis presented here is that an interpretive framework based on nutritional biology is able to shed constructive light on the fundamental problems of nutritional science. In this context, the establishment of 'nutritional biology' as a basic discipline in research and education would be a first step toward recognizing the phenomenon of 'nutrition' as an oecic process as a special case of an organism-environment interaction. Modern nutritional science should be substantively grounded on ecological-and therefore systems biology as well as organismic-principles. The aim of nutritional biology, then, should be to develop near-universal 'law statements' in nutritional science-a task which presents a major challenge for the current science system. PMID:26584807

  11. A basic analysis toolkit for biological sequences

    Directory of Open Access Journals (Sweden)

    Siragusa Enrico

    2007-09-01

    Full Text Available Abstract This paper presents a software library, nicknamed BATS, for some basic sequence analysis tasks. Namely, local alignments, via approximate string matching, and global alignments, via longest common subsequence and alignments with affine and concave gap cost functions. Moreover, it also supports filtering operations to select strings from a set and establish their statistical significance, via z-score computation. None of the algorithms is new, but although they are generally regarded as fundamental for sequence analysis, they have not been implemented in a single and consistent software package, as we do here. Therefore, our main contribution is to fill this gap between algorithmic theory and practice by providing an extensible and easy to use software library that includes algorithms for the mentioned string matching and alignment problems. The library consists of C/C++ library functions as well as Perl library functions. It can be interfaced with Bioperl and can also be used as a stand-alone system with a GUI. The software is available at http://www.math.unipa.it/~raffaele/BATS/ under the GNU GPL.

  12. RF microwave hybrids basics, materials and processes

    CERN Document Server

    Brown, Richard

    2007-01-01

    Preface. Acknowledgements. 1. Hybrids vs MMICs. 2. Basic Concepts. 3. Planar Waveguides. 4. Current Flow and Loss Considerations. 5. Substrates. 6. Thick Film. 7. Thin Film. 8. Dielectric Deposition. 9. Polymers. 10. Processing Strategies. 11. Photolithography. 12. Electroplating. 13. Etching. 14. Components. 15. Packaging. 16. Superconductivity. 17. MEMS. Appendix A. Definition of symbols. Appendix B. Company directory. Appendix C. Conversion table. Appendix D. Graphic evaluation of w/h and eeff for microstrip. Subject Index.

  13. Basics of cutting and abrasive processes

    CERN Document Server

    Toenshoff, Hans Kurt

    2013-01-01

    Manufacturing is the basic industrial activity generating real value. Cutting and abrasive technologies are the backbone of precision production in machine, automotive and aircraft building as well as of production of consumer goods. We present the knowledge of modern manufacturing in these technologies on the basis of scientific research. The theory of cutting and abrasive processes and the knowledge about their application in industrial practice are a prerequisite for the studies of manufacturing science and an important part of the curriculum of the master study in German mechanical engineering. The basis of this book is our lecture “Basics of cutting and abrasive processes” (4 semester hours/3 credit hours) at the Leibniz University Hannover, which we offer to the diploma and master students specializing in manufacturing science.

  14. Applied medical image processing a basic course

    CERN Document Server

    Birkfellner, Wolfgang

    2014-01-01

    A widely used, classroom-tested text, Applied Medical Image Processing: A Basic Course delivers an ideal introduction to image processing in medicine, emphasizing the clinical relevance and special requirements of the field. Avoiding excessive mathematical formalisms, the book presents key principles by implementing algorithms from scratch and using simple MATLAB®/Octave scripts with image data and illustrations on an accompanying CD-ROM or companion website. Organized as a complete textbook, it provides an overview of the physics of medical image processing and discusses image formats and data storage, intensity transforms, filtering of images and applications of the Fourier transform, three-dimensional spatial transforms, volume rendering, image registration, and tomographic reconstruction.

  15. Biological indicators and sterilization processes

    International Nuclear Information System (INIS)

    A review is given of biological indicators, e.g. bacterial spores, used for monitoring the efficiency of sterilization processes. The choice of a suitable biological indicator depending on its resistance to heat sterilization, ionizing radiation and gaseous sterilization is discussed. Factors affecting the reliability of biological indicators are also discussed including genotypically determined resistance, environmental influences during growth and sporulation, the influence of the environment during storage and sterilization and the influence of recovery conditions. (U.K.)

  16. Adaptive multiscale biological signal processing

    OpenAIRE

    Testoni, Nicola

    2008-01-01

    Biological processes are very complex mechanisms, most of them being accompanied by or manifested as signals that reflect their essential characteristics and qualities. The development of diagnostic techniques based on signal and image acquisition from the human body is commonly retained as one of the propelling factors in the advancements in medicine and biosciences recorded in the recent past. It is a fact that the instruments used for biological signal and image rec...

  17. Stochastic processes in cell biology

    CERN Document Server

    Bressloff, Paul C

    2014-01-01

    This book develops the theory of continuous and discrete stochastic processes within the context of cell biology.  A wide range of biological topics are covered including normal and anomalous diffusion in complex cellular environments, stochastic ion channels and excitable systems, stochastic calcium signaling, molecular motors, intracellular transport, signal transduction, bacterial chemotaxis, robustness in gene networks, genetic switches and oscillators, cell polarization, polymerization, cellular length control, and branching processes. The book also provides a pedagogical introduction to the theory of stochastic process – Fokker Planck equations, stochastic differential equations, master equations and jump Markov processes, diffusion approximations and the system size expansion, first passage time problems, stochastic hybrid systems, reaction-diffusion equations, exclusion processes, WKB methods, martingales and branching processes, stochastic calculus, and numerical methods.   This text is primarily...

  18. Understanding the basic biology underlying the flavor world of children

    Directory of Open Access Journals (Sweden)

    Julie A. MENNELLA, Alison K. VENTURA

    2010-12-01

    Full Text Available Health organizations worldwide recommend that adults and children minimize intakes of excess energy and salty, sweet, and fatty foods (all of which are highly preferred tastes and eat diets richer in whole grains, low- and non- fat dairy products, legumes, fish, lean meat, fruits, and vegetables (many of which taste bitter. Despite such recommendations and the well-established benefits of these foods to human health, adults are not complying, nor are their children. A primary reason for this difficulty is the remarkably potent rewarding properties of the tastes and flavors of foods high in sweetness, saltiness, and fatness. While we cannot easily change children’s basic ingrained biology of liking sweets and avoiding bitterness, we can modulate their flavor preferences by providing early exposure, starting in utero, to a wide variety of flavors within healthy foods, such as fruits, vegetables, and whole grains. Because the flavors of foods mothers eat during pregnancy and lactation also flavor amniotic fluid and breast milk and become preferred by infants, pregnant and lactating women should widen their food choices to include as many flavorful and healthy foods as possible. These experiences, combined with repeated exposure to nutritious foods and flavor variety during the weaning period and beyond, should maximize the chances that children will select and enjoy a healthier diet [Current Zoology 56 (6: 834–841, 2010].

  19. Achieving year 2000 readiness: basic processes

    International Nuclear Information System (INIS)

    This document provides an approach or addressing safety and operability concerns related to Year 2000 (Y2K). Although it was prepared for nuclear power plants the methods described are applicable to other nuclear installations and to other industrial concerns. The basic goal was to provide a brief but comprehensive approach that may be used to discover, understand and correct the Y2K related problems. The document relies on certain basic expectations of the facility that would apply to any programme: ownership, management, knowledgeable participants, thorough application of the approach, documentation of efforts, quality assurance of products and compliance with all regulatory requirements. The IAEA has and will continue to be involved with Member States to assist them in implementing this document and achieving Y2K Readiness

  20. Basic processes and trends in gaseous detectors

    CERN Document Server

    Sauli, Fabio

    1999-01-01

    Almost a century after the invention of the proportional counter, a large research effort is still devoted to better understand the basic properties of gaseous detectors, and to improve their performances and reliability, particularly in view of use at the high radiation levels expected at LHC. In the first part of the lectures, after a brief introduction on underlying physical phenomena, I will review modern sophisticated computational tools, as well as some classic "back of the envelope" analytical methods, available today for estimating the general performances of gaseous detectors. In the second part, I will analyze in more detail problems specific to the use of detectors at high rates (space charge, discharges, aging), and describe the recent development of powerful and perhaps more reliable devices, particularly in the field of position-sensitive micro-pattern detectors.

  1. Basic considerations on business process quality

    OpenAIRE

    Reichert, Manfred; Lohrmann, Matthias

    2010-01-01

    Quality management practices in manufacturing and logistics have led to proven results for organisations with respect to competitiveness and portability. At the same time, business process management not only addresses a comprehensive functional scope including the ever more important administrative functions and business services, but also contributes to realising potentials (e.g. in the field of process automation) through extensive use of information technology. Integrating quality managem...

  2. IS IT POSSIBLE TO INTEGRATE BASIC BIOLOGICAL DISCIPLINES IN A PRIVATE INSTITUTION?

    Directory of Open Access Journals (Sweden)

    L.A. Azzalis

    2008-05-01

    Full Text Available Basic biological disciplines as biochemistry, genetic and molecular biology have grown faster than any of other sciences. Moreover, those disciplines contribute to the understanding and treatment of an elevated number of illnesses. On the other hand, teachers cannot assure the graduating students that each particular discipline  is essential.  Furthermore,  those disciplines are often studied separately without any interdisciplinary integration between them.  The new curriculum proposed at Anhembi Morumbi University  - a private institution placed at São Paulo city  - incorporates learning blocks that  have been designed to integrate basic biological disciplines and clinical contents from the beginning in order to provide the stimulation and motivation to guide the  student through his learning.  The educational trend has concentrated on the following steps: 1 Biochemistry, genetic, cellular and molecular biology teachers´ from that institution have elaborated a new discipline  that was named Biologic Process. The aim of this new discipline was integrate basic biological sciences in a single content;  2  Selecting problems that could be discussed in the light of biochemistry, genetic and molecular contents; e.g. sickle cell anemia; 3 Developing  an innovative instructional method that challenges students “learn to learn” different from problem-based learning , economically unavailable at any particular university,  and  4 Assessments that measure knowledge, skills, attitudes and beliefs.  We believe that the future pedagogical system in  private health university will be a combination of “classical”  presentation of contents combined with actively involved students in the educational process and instruction based on either hypothetical  or real clinical cases in order to create  the stimulus for  the student continues to  integrate basic and clinical investigation.

  3. Skeletal Muscle Stem Cells from Animals I. Basic Cell Biology

    OpenAIRE

    Michael V. Dodson, Gary J. Hausman, LeLuo Guan, Min Du, Theodore P. Rasmussen, Sylvia P. Poulos, Priya Mir, Werner G. Bergen, Melinda E. Fernyhough, Douglas C. McFarland, Robert P. Rhoads, Beatrice Soret, James M. Reecy, Sandra G. Velleman, Zhihua Jiang

    2010-01-01

    Skeletal muscle stem cells from food-producing animals are of interest to agricultural life scientists seeking to develop a better understanding of the molecular regulation of lean tissue (skeletal muscle protein hypertrophy) and intramuscular fat (marbling) development. Enhanced understanding of muscle stem cell biology and function is essential for developing technologies and strategies to augment the metabolic efficiency and muscle hypertrophy of growing animals potentially leading to grea...

  4. Skeletal muscle stem cells from animals I. basic cell biology

    OpenAIRE

    Dodson, Michael V.; Hausman, Gary J.; Guan, Leluo; Du, Min; Rasmussen, Theodore P.; Poulos, Sylvia P; Mir, Priya; Bergen, Werner G.; Fernyhough, Melinda E.; McFarland, Douglas C.; Rhoads, Robert P.; Soret Lafraya, Beatriz; Reecy, James M.; Velleman, Sandra G; Jiang, Zhihua

    2010-01-01

    Skeletal muscle stem cells from food-producing animals are of interest to agricultural life scientists seeking to develop a better understanding of the molecular regulation of lean tissue (skeletal muscle protein hypertrophy) and intramuscular fat (marbling) development. Enhanced understanding of muscle stem cell biology and function is essential for developing technologies and strategies to augment the metabolic efficiency and muscle hypertrophy of growing animals potentially leading to grea...

  5. Some Basic Aspects of HLA-G Biology

    Directory of Open Access Journals (Sweden)

    Estibaliz Alegre

    2014-01-01

    Full Text Available Human leukocyte antigen-G (HLA-G is a low polymorphic nonclassical HLA-I molecule restrictively expressed and with suppressive functions. HLA-G gene products are quite complex, with seven HLA-G isoforms, four membrane bound, and other three soluble isoforms that can suffer different posttranslational modifications or even complex formations. In addition, HLA-G has been described included in exosomes. In this review we will focus on HLA-G biochemistry with special emphasis to the mechanisms that regulate its expression and how the protein modifications affect the quantification in biological fluids.

  6. An investigation of the relationship between having recent knowledge in basic biology and student success in Anatomy and Physiology I

    Science.gov (United States)

    Taylor, Edward T.

    Allied Health Programs generally require that students complete coursework in Human Anatomy and Physiology I and II as part of their Pre-Allied Health curriculum. Human Anatomy and Physiology I generally has as a prerequisite some coursework in basic biology. Basic biology as a prerequisite should provide students with the foundation of knowledge in the basic biological principles and processes that will prepare them for the material presented in a Human Anatomy and Physiology I course and the Allied Health Program. The principle question that prompted this study was, Do students need coursework in basic biology to be successful in Anatomy and Physiology I? The purpose of this study was to determine if there was a difference in the exam average obtained in Biology 202, Human Anatomy and Physiology I, for those students who have had, within the previous three years, a foundation course in basic biology as compared to those students who have not, within the previous three years, had a foundation course in basic biology. The current study analyzed data obtained on 642 students who were enrolled in Biology 202, Anatomy and Physiology I, during the Fall semester of 2000 to the Spring semester of 2003 at Wor-Wic Community College. Statistical techniques including an ANOVA, Pearson Product Moment Correlation, and a Multiple Regression Analysis were conducted to reveal any relationships in the data. The dependent variable was the exam average obtained in the independent variables included the time period since the student had taken a basic biology course, sex, age, and college GPA. The results of the ANOVA indicated that there was no relationship between the exam average between current and non-current students, where alpha = 0.05 and p = 0.783. There was statistically significance for GPA, where p = 0 .000. There was also statistically significant interactions between last biology course and GPA, p = 0.05, last biology course, sex, and GPA, p = 0.002. The Pearson Product

  7. Basic disturbances of information processing in psychosis prediction

    OpenAIRE

    MitjaBodatsch

    2013-01-01

    The basic symptoms (BS) approach provides a valid instrument in predicting psychosis onset and represents moreover a significant heuristic framework for research. The term ‘basic symptoms’ denotes subtle changes of cognition and perception in the earliest and prodromal stages of psychosis development. BS are thought to correspond to disturbances of neural information processing. Following the heuristic implications of the BS approach, the present paper aims at exploring disturbances of inform...

  8. Basic Disturbances of Information Processing in Psychosis Prediction

    OpenAIRE

    Bodatsch, Mitja; Klosterkötter, Joachim; Müller, Ralf; Ruhrmann, Stephan

    2013-01-01

    The basic symptoms (BS) approach provides a valid instrument in predicting psychosis onset and represents moreover a significant heuristic framework for research. The term “basic symptoms” denotes subtle changes of cognition and perception in the earliest and prodromal stages of psychosis development. BS are thought to correspond to disturbances of neural information processing. Following the heuristic implications of the BS approach, the present paper aims at exploring disturbances of inform...

  9. Enantioselective separation of biologically active basic compounds in ultra-performance supercritical fluid chromatography.

    Science.gov (United States)

    Geryk, Radim; Kalíková, Květa; Schmid, Martin G; Tesařová, Eva

    2016-08-17

    The enantioseparation of basic compounds represent a challenging task in modern SFC. Therefore this work is focused on development and optimization of fast SFC methods suitable for enantioseparation of 27 biologically active basic compounds of various structures. The influences of the co-solvent type as well as different mobile phase additives on retention, enantioselectivity and enantioresolution were investigated. Obtained results confirmed that the mobile phase additives, especially bases (or the mixture of base and acid), improve peak shape and enhance enantioresolution. The best results were achieved with isopropylamine or the mixture of isopropylamine and trifluoroacetic acid as additives. In addition, the effect of temperature and back pressure were evaluated to optimize the enantioseparation process. The immobilized amylose-based chiral stationary phase, i.e. tris(3,5-dimethylphenylcarbamate) derivative of amylose proved to be useful tool for the enantioseparation of a broad spectrum of chiral bases. The chromatographic conditions that yielded baseline enantioseparations of all tested compounds were discovered. The presented work can serve as a guide for simplifying the method development for enantioseparation of basic racemates in SFC. PMID:27286774

  10. Integrating system safety into the basic systems engineering process

    Science.gov (United States)

    Griswold, J. W.

    1971-01-01

    The basic elements of a systems engineering process are given along with a detailed description of what the safety system requires from the systems engineering process. Also discussed is the safety that the system provides to other subfunctions of systems engineering.

  11. Polyhydroyalkanoates: from Basic Research and Molecular Biology to Application

    Directory of Open Access Journals (Sweden)

    Amro Abd alFattah Amara

    2010-09-01

    Full Text Available This review describes the Polyhydroxyalkanoate (PHA, an intracellular biodegradable microbial polymer. PHAs is formed from different types of three hydroxyalkanoic acids monomers, each unit forms an ester bond with the hydroxyl group of the other one and the hydroxyl substituted carbon has R configuration. The C-3 atom in β position is branched with at least one carbon atom in the form of methyl group (C1 to thirteen carbons in the form of tridecyl (C13. This alkyl side chain is not necessarily saturated. PHAs are biosynthesized through regulated pathways by specific enzymes. PHAs are accumulated in bacterial cells from soluble to insoluble form as storage materials inside the inclusion bodies during unbalanced nutrition or to save organisms from reducing equivalents. PHAs are converted again to soluble components by PHAs depolymerases and the degraded materials enter various metabolic pathways. Until now, four classes of enzymes responsible for PHAs polymerization are known. PHAs were well studied regarding their promising applications, physical, chemical and biological properties. PHAs are biodegradable, biocompatible, have good material properties, renewable and can be used in many applications. The most limiting factor in PHAs commercialization is their high cost compared to the petroleum plastics. This review highlights the new knowledge and that established by the pioneers in this field as well as the factors, which affect PHAs commercialization.

  12. An introduction to stochastic processes with applications to biology

    CERN Document Server

    Allen, Linda J S

    2010-01-01

    An Introduction to Stochastic Processes with Applications to Biology, Second Edition presents the basic theory of stochastic processes necessary in understanding and applying stochastic methods to biological problems in areas such as population growth and extinction, drug kinetics, two-species competition and predation, the spread of epidemics, and the genetics of inbreeding. Because of their rich structure, the text focuses on discrete and continuous time Markov chains and continuous time and state Markov processes.New to the Second EditionA new chapter on stochastic differential equations th

  13. Teenagers Poor Readers: Evaluation of Basic Cognitive Process

    Directory of Open Access Journals (Sweden)

    Rosa del Carmen Flores Macías

    2015-04-01

    Full Text Available The present study aims to investigate the cognitive processes associated with reading difficulties of teenage poor readers. Several studies suggest that this population presents a poor comprehension, despite reading the words properly and have good phonological skills (which distinguishes them from a population with dyslexia. With a comparative cross-sectional design the Sicole-R multimedia battery, which assesses basic cognitive processes related to reading, was applied to participants. Results indicate that poor reader students exhibit a lower performance than normal readers in phonological awareness, orthographic processing and processing syntax, although only the latter comparison was statistically significant.

  14. Aging and the number sense: preserved basic non-symbolic numerical processing and enhanced basic symbolic processing

    Directory of Open Access Journals (Sweden)

    Jade Eloise eNorris

    2015-07-01

    Full Text Available Aging often leads to general cognitive decline in domains such as memory and attention. The effect of aging on numerical cognition, particularly on foundational numerical skills known as the Number Sense, is not well known. Early research focused on the effect of aging on arithmetic. Recent studies have begun to investigate the impact of healthy aging on basic numerical skills, but focused on non-symbolic quantity discrimination alone. Moreover, contradictory findings have emerged. The current study aimed to further investigate the impact of aging on basic non-symbolic and symbolic numerical skills. A group of 25 younger (18-25 and 25 older adults (60-77 participated in non-symbolic and symbolic numerical comparison tasks. Mathematical and spelling abilities were also measured. Results showed that aging had no effect on foundational non-symbolic numerical skills, as both groups performed similarly (RTs, accuracy and Weber fractions (w. All participants showed decreased non-symbolic acuity (accuracy and w in trials requiring inhibition. However, aging appears to be associated with a greater decline in discrimination speed in such trials. Furthermore, aging seems to have a positive impact on mathematical ability and basic symbolic numerical processing, as older participants attained significantly higher mathematical achievement scores, and performed significantly better on the symbolic comparison task than younger participants. The findings suggest that aging and its lifetime exposure to numbers may lead to better mathematical achievement and stronger basic symbolic numerical skills. Our results further support the observation that basic non-symbolic numerical skills are resilient to aging, but that aging may exacerbate poorer performance on trials requiring inhibitory processes. These findings lend further support to the notion that preserved basic numerical skills in aging may reflect the preservation of an innate, primitive and embedded Number

  15. The basics of IT audit purposes, processes, and practical information

    CERN Document Server

    Gantz, Stephen D

    2013-01-01

    The Basics of IT Audit: Purposes, Processes, and Practical Information provides you with a thorough, yet concise overview of IT auditing. Packed with specific examples, this book gives insight into the auditing process and explains regulations and standards such as the ISO-27000, series program, CoBIT, ITIL, Sarbanes-Oxley, and HIPPA. IT auditing occurs in some form in virtually every organization, private or public, large or small. The large number and wide variety of laws, regulations, policies, and industry standards that call for IT auditing make it hard for organizations to consistent

  16. Basic disturbances of information processing in psychosis prediction

    Directory of Open Access Journals (Sweden)

    Mitja eBodatsch

    2013-08-01

    Full Text Available The basic symptoms (BS approach provides a valid instrument in predicting psychosis onset and represents moreover a significant heuristic framework for research. The term ‘basic symptoms’ denotes subtle changes of cognition and perception in the earliest and prodromal stages of psychosis development. BS are thought to correspond to disturbances of neural information processing. Following the heuristic implications of the BS approach, the present paper aims at exploring disturbances of information processing, revealed by fMRI and EEG as characteristics of the at-risk state of psychosis. Furthermore, since high-risk studies employing UHR criteria revealed non-conversion rates commonly exceeding 50%, thus warranting approaches that increase specificity, the potential contribution of neural information processing disturbances to psychosis prediction is reviewed. In summary, the at-risk state seems to be associated with information processing disturbances. Moreover, fMRI investigations suggested that disturbances of language processing domains might be a characteristic of the prodromal state. Neurophysiological studies revealed that disturbances of sensory processing may assist psychosis prediction in allowing for a quantification of risk in terms of magnitude and time. The latter finding represents a significant advancement since an estimation of the time to event has not yet been achieved by clinical approaches. Some evidence suggests a close relationship between self-experienced BS and neural information processing. With regard to future research, the relationship between neural information processing disturbances and different clinical risk concepts warrants further investigations. Thereby,a possible time sequence in the prodromal phase might be of particular interest.

  17. Basic information processing in children with Pervasive Developmental Disorders

    DEFF Research Database (Denmark)

    Madsen, Gitte

    to 12 months. Schizophrenia is characterised by disturbances in the brain’s processing of information. One example of information processing is the brain’s ability to gate or filter out stimuli, the so-called “filter function”. Psychophysiological studies have shown, that patients with schizophrenia...... have reduced sensory motor gating measured by”P50 suppression” and reduced”pre-pulse inhibition of the startle reflex” (PPI). Aims: 1. To compare basic information processing in children with PDD and a group of healthy controls. 2. To investigate whether it is possible, on the basis of outcomes...... of the psychophysiological tests, to differentiate sub-groups within the spectrum of PDD. 3. To compare potential subgroup within the spectrum of PDD with known schizophrenic subgroups. Material and methodology: A case-control study consisting of two groups of children 8-12 years old matched as to age and gender: 1...

  18. Mathematics for seismic data processing with basic microcomputer programs

    Energy Technology Data Exchange (ETDEWEB)

    Camina, A.R.; Janacek, G.J.

    1985-01-01

    The new, refined techniques for exploration of oil and gas and the growth of computer uses have led to a far wider application of mathematics, and the interpretation of seismic data in particular. The authors explain in detail the mathematical principles required for signal processing and clarify for the reader what are sometimes very complex concepts. The book starts at precalculus level and progresses through to advanced theories and principles. A collection of BASIC microcomputer programs is included to give the reader a practical feel for the mathematics and their applications to these techniques.

  19. Biological processes influencing contaminant release from sediments

    International Nuclear Information System (INIS)

    The influence of biological processes, including bioturbation, on the mobility of contaminants in freshwater sediments is described. Effective mass coefficients are estimated for tubificid oligochaetes as a function of worm behavior and biomass density. The mass transfer coefficients were observed to be inversely proportional to water oxygen content and proportional to the square root of biomass density. The sediment reworking and contaminant release are contrasted with those of freshwater amphipods. The implications of these and other biological processes for contaminant release and i n-situ remediation of soils and sediments are summarized. 4 figs., 1 tab

  20. Towards the understanding of network information processing in biology

    Science.gov (United States)

    Singh, Vijay

    Living organisms perform incredibly well in detecting a signal present in the environment. This information processing is achieved near optimally and quite reliably, even though the sources of signals are highly variable and complex. The work in the last few decades has given us a fair understanding of how individual signal processing units like neurons and cell receptors process signals, but the principles of collective information processing on biological networks are far from clear. Information processing in biological networks, like the brain, metabolic circuits, cellular-signaling circuits, etc., involves complex interactions among a large number of units (neurons, receptors). The combinatorially large number of states such a system can exist in makes it impossible to study these systems from the first principles, starting from the interactions between the basic units. The principles of collective information processing on such complex networks can be identified using coarse graining approaches. This could provide insights into the organization and function of complex biological networks. Here I study models of biological networks using continuum dynamics, renormalization, maximum likelihood estimation and information theory. Such coarse graining approaches identify features that are essential for certain processes performed by underlying biological networks. We find that long-range connections in the brain allow for global scale feature detection in a signal. These also suppress the noise and remove any gaps present in the signal. Hierarchical organization with long-range connections leads to large-scale connectivity at low synapse numbers. Time delays can be utilized to separate a mixture of signals with temporal scales. Our observations indicate that the rules in multivariate signal processing are quite different from traditional single unit signal processing.

  1. From basic research to biological treatments: psoriasis publications over the past 15 years.

    Science.gov (United States)

    Pavlovsky, L; Mimouni, F B; Hodak, E; David, M; Mimouni, D

    2009-07-01

    In the past few decades, great progress has been made in psoriasis research, culminating with the development of new, biological treatments. We designed this study to test the hypothesis that there is a linear increase in psoriasis publications over time. We evaluated all PubMed articles from 1 January 1993 to 31 December 2007. We categorized the search into basic science, traditional therapy and new biological treatments. We used regression analysis to determine the effect of year of publication upon number of publications of each type. There was a significant quadratic increase in the number of all types of psoriasis publications, with basic science-related publications being greatest, followed by relevant clinical publications. We conclude that better understanding of psoriasis immunopathology has led to a significant yearly increase in clinical studies, contributing approximately 60% of studies in the entire field of dermatology reports. PMID:19438559

  2. Stability and biological activity evaluations of PEGylated human basic fibroblast growth factor

    OpenAIRE

    Hadadian, Shahin; Shamassebi, Dariush Norouzian; Mirzahoseini, Hasan; Shokrgozar, Mohamad Ali; Bouzari, Saeid; Sepahi, Mina

    2015-01-01

    Background: Human basic fibroblast growth factor (hBFGF) is a heparin-binding growth factor and stimulates the proliferation of a wide variety of cells and tissues causing survival properties and its stability and biological activity improvements have received much attention. Materials and Methods: In the present work, hBFGF produced by engineered Escherichia coli and purified by cation exchange and heparin affinity chromatography, was PEGylated under appropriate condition employing 10 kD pol...

  3. Ontogeny of taste preferences: basic biology and implications for health12345

    OpenAIRE

    Mennella, Julie A.

    2014-01-01

    Health initiatives address childhood obesity in part by encouraging good nutrition early in life. This review highlights the science that shows that children naturally prefer higher levels of sweet and salty tastes and reject lower levels of bitter tastes than do adults. Thus, their basic biology does not predispose them to favor the recommended low-sugar, low-sodium, vegetable-rich diets and makes them especially vulnerable to our current food environment of foods high in salt and refined su...

  4. Adaptive filtering in biological signal processing.

    Science.gov (United States)

    Iyer, V K; Ploysongsang, Y; Ramamoorthy, P A

    1990-01-01

    The high dependence of conventional optimal filtering methods on the a priori knowledge of the signal and noise statistics render them ineffective in dealing with signals whose statistics cannot be predetermined accurately. Adaptive filtering methods offer a better alternative, since the a priori knowledge of statistics is less critical, real time processing is possible, and the computations are less expensive for this approach. Adaptive filtering methods compute the filter coefficients "on-line", converging to the optimal values in the least-mean square (LMS) error sense. Adaptive filtering is therefore apt for dealing with the "unknown" statistics situation and has been applied extensively in areas like communication, speech, radar, sonar, seismology, and biological signal processing and analysis for channel equalization, interference and echo canceling, line enhancement, signal detection, system identification, spectral analysis, beamforming, modeling, control, etc. In this review article adaptive filtering in the context of biological signals is reviewed. An intuitive approach to the underlying theory of adaptive filters and its applicability are presented. Applications of the principles in biological signal processing are discussed in a manner that brings out the key ideas involved. Current and potential future directions in adaptive biological signal processing are also discussed. PMID:2180633

  5. Study on process basic requirements of experimental facility of advanced spent fuel management process

    International Nuclear Information System (INIS)

    The advanced spent fuel management process, which was proposed to reduce the overall volume of the PWR spent fuel and improve safety and economy of the long-term storage of spent fuel, is under research and development. Hot cell facilities of α-γ type and inert atmosphere are required essentially for safe hot test and verification of this process. In this study, design basic data are established, and these data include process flow, process condition and yields, mass and radioactivity balance of radionuclides, process safety considerations, etc. And also, these data will be utilized for basic and detail design of hot cell facility, secured conservative safety and effective operability

  6. Basic thin film processing for high-Tc superconductors

    International Nuclear Information System (INIS)

    Much attention has been paid for the thin films of perovskite-type oxides especially for the thin films of the high-Tc superconducting ceramics. Historically the thin films of the perovskite-type oxides have been studied as a basic research for ferroelectric materials. Thin films of BaTiO3 and PbTiO3 were tried to deposited and there ferroelectricity was evaluated. Recently this kind of perovskite thin films, including PZT (PbTiO3-PbZrO3) and PLZT [(Pb, La) (Zr, T)O3] have been studied in relation to the synthesis of thin film dielectrics, pyroelectrics, piezoelectrics, electro-optic materials, and acousto-optic materials. Thin films of BPB (BaPbO3- BaBiO3) were studied as oxide superconductors. At present the thin films of the rare-earth high-Tc superconductors of LSC (La1-xSrxCuO4) and YBC (YBa2Cu3O7-δ) have been successfully synthesized owing to the previous studies on the ferroelectric thin films of the perovskite- type oxides. Similar to the rare-earth high-Tc superconductors thin films of the rare-earth-free high-Tc superconductors of BSCC (Bi-Sr-Ca-Cu-O)9 and TBCC (Tl- Ba-Ca-Cu-O)10 system have been synthesized. In this section the basic processes for the fabrication of the high- Tc perovskite superconducting thin films are described

  7. Back to basics: definitions and processes of assessments

    Directory of Open Access Journals (Sweden)

    Maddalena Taras

    2010-12-01

    Full Text Available In a performance – and results – driven educational world the concept of formative assessment has inspired the educational community by its discourse and focus on learning and learners. However, a number of controversies have surfaced: primary among these are terminological opacities and disparities both within and across continents and sectors (TARAS 2007b, 2009. Among others, Perrenoud (1998 signals the importance of positioning theoretical and practical discourse on assessment within a wider pedagogic context and within theories of learning. Taras (2005 argues that concepts of assessment, including formative assessment, are best and more effectively understood firstly within the wider assessment framework and, secondly, within the relationships of summative, formative and self-assessment. This paper examines definitions of assessments. It begins with basic concepts of assessment, summative, formative, self-assessment and feedback and inter-relates these. The principles inherent in definitions set the parameters of both processes and practice as part of a logical sequence and framework.

  8. The reverse control of irreversible biological processes.

    Science.gov (United States)

    Cho, Kwang-Hyun; Joo, Jae Il; Shin, Dongkwan; Kim, Dongsan; Park, Sang-Min

    2016-09-01

    Most biological processes have been considered to be irreversible for a long time, but some recent studies have shown the possibility of their reversion at a cellular level. How can we then understand the reversion of such biological processes? We introduce a unified conceptual framework based on the attractor landscape, a molecular phase portrait describing the dynamics of a molecular regulatory network, and the phenotype landscape, a map of phenotypes determined by the steady states of particular output molecules in the attractor landscape. In this framework, irreversible processes involve reshaping of the phenotype landscape, and the landscape reshaping causes the irreversibility of processes. We suggest reverse control by network rewiring which changes network dynamics with constant perturbation, resulting in the restoration of the original phenotype landscape. The proposed framework provides a conceptual basis for the reverse control of irreversible biological processes through network rewiring. WIREs Syst Biol Med 2016, 8:366-377. doi: 10.1002/wsbm.1346 For further resources related to this article, please visit the WIREs website. PMID:27327189

  9. All basic condensed matter physics phenomena and notions mirror in biology – A hypothesis, two examples and a novel prediction

    Indian Academy of Sciences (India)

    G Baskaran

    2002-02-01

    A few billion years of evolutionary time and the complex process of ‘selection’ has given biology an opportunity to explore a variety of condensed matter phenomena and situations, some of which have been discovered by humans in the laboratory, that too only in extreme non-biological conditions such as low temperatures, high purity, high pressure etc., in the last centuries. Biology, at some level, is a complex and self-regulated condensed matter system compared to the ‘inanimate’ condensed matter systems such as liquid 4He, liquid water or a piece of graphite. In this article I propose a hypothesis that ‘all basic condensed matter physics phenomena and notions (already known and ones yet to be discovered) mirror in biology’. I explain this hypothesis by considering the idea of ‘Bose condensation’ or ‘momentum space order’ and discuss two known example of quantum magnetism encountered in biology. I also provide some new and rather speculative possibility, from light harvesting in biological photosynthesis, of mesoscopic exciton condensation related phenomena at room temperature.

  10. Building phenomenological models of complex biological processes

    Science.gov (United States)

    Daniels, Bryan; Nemenman, Ilya

    2009-11-01

    A central goal of any modeling effort is to make predictions regarding experimental conditions that have not yet been observed. Overly simple models will not be able to fit the original data well, but overly complex models are likely to overfit the data and thus produce bad predictions. Modern quantitative biology modeling efforts often err on the complexity side of this balance, using myriads of microscopic biochemical reaction processes with a priori unknown kinetic parameters to model relatively simple biological phenomena. In this work, we show how Bayesian model selection (which is mathematically similar to low temperature expansion in statistical physics) can be used to build coarse-grained, phenomenological models of complex dynamical biological processes, which have better predictive powers than microscopically correct, but poorely constrained mechanistic molecular models. We illustrate this on the example of a multiply-modifiable protein molecule, which is a simplified description of multiple biological systems, such as an immune receptors and an RNA polymerase complex. Our approach is similar in spirit to the phenomenological Landau expansion for the free energy in the theory of critical phenomena.

  11. Stochastic transport processes in discrete biological systems

    CERN Document Server

    Frehland, Eckart

    1982-01-01

    These notes are in part based on a course for advanced students in the applications of stochastic processes held in 1978 at the University of Konstanz. These notes contain the results of re­ cent studies on the stochastic description of ion transport through biological membranes. In particular, they serve as an introduction to an unified theory of fluctuations in complex biological transport systems. We emphasize that the subject of this volume is not to introduce the mathematics of stochastic processes but to present a field of theoretical biophysics in which stochastic methods are important. In the last years the study of membrane noise has become an important method in biophysics. Valuable information on the ion transport mechanisms in membranes can be obtained from noise analysis. A number of different processes such as the opening and closing of ion channels have been shown to be sources of the measured current or voltage fluctuations. Bio­ logical 'transport systems can be complex. For example, the tr...

  12. Diffusion processes and related topics in biology

    CERN Document Server

    Ricciardi, Luigi M

    1977-01-01

    These notes are based on a one-quarter course given at the Department of Biophysics and Theoretical Biology of the University of Chicago in 1916. The course was directed to graduate students in the Division of Biological Sciences with interests in population biology and neurobiology. Only a slight acquaintance with probability and differential equations is required of the reader. Exercises are interwoven with the text to encourage the reader to play a more active role and thus facilitate his digestion of the material. One aim of these notes is to provide a heuristic approach, using as little mathematics as possible, to certain aspects of the theory of stochastic processes that are being increasingly employed in some of the population biol­ ogy and neurobiology literature. While the subject may be classical, the nov­ elty here lies in the approach and point of view, particularly in the applica­ tions such as the approach to the neuronal firing problem and its related dif­ fusion approximations. It is a ple...

  13. ROLE OF BIOLOGICAL PROCESSES IN TECHNOLOGY OF GROUND WATER TREATMENT

    OpenAIRE

    Yu. P. Sedluho; M. I. Lemesh

    2015-01-01

    Technological peculiar features of biocenosis development in water treatment facilities and a role of biological processes in the technology of ground water treatment are considered in the paper. The paper provides main factors that influence on biological process development.

  14. Stochastic Simulation of Process Calculi for Biology

    Directory of Open Access Journals (Sweden)

    Andrew Phillips

    2010-10-01

    Full Text Available Biological systems typically involve large numbers of components with complex, highly parallel interactions and intrinsic stochasticity. To model this complexity, numerous programming languages based on process calculi have been developed, many of which are expressive enough to generate unbounded numbers of molecular species and reactions. As a result of this expressiveness, such calculi cannot rely on standard reaction-based simulation methods, which require fixed numbers of species and reactions. Rather than implementing custom stochastic simulation algorithms for each process calculus, we propose to use a generic abstract machine that can be instantiated to a range of process calculi and a range of reaction-based simulation algorithms. The abstract machine functions as a just-in-time compiler, which dynamically updates the set of possible reactions and chooses the next reaction in an iterative cycle. In this short paper we give a brief summary of the generic abstract machine, and show how it can be instantiated with the stochastic simulation algorithm known as Gillespie's Direct Method. We also discuss the wider implications of such an abstract machine, and outline how it can be used to simulate multiple calculi simultaneously within a common framework.

  15. Process efficiency simulation for key process parameters in biological methanogenesis

    Directory of Open Access Journals (Sweden)

    Sébastien Bernacchi

    2014-09-01

    Full Text Available New generation biofuels are a suitable approach to produce energy carriers in an almost CO2 neutral way. A promising reaction is the conversion of CO2 and H2 to CH4. This contribution aims at elucidating a bioprocess comprised of a core reaction unit using microorganisms from the Archaea life domain, which metabolize CO2 and H2 to CH4, followed by a gas purification step. The process is simulated and analyzed thermodynamically using the Aspen Plus process simulation environment. The goal of the study was to quantify effects of process parameters on overall process efficiency using a kinetic model derived from previously published experimental results. The used empirical model links the production rate of CH4 and biomass to limiting reactant concentrations. In addition, Aspen Plus was used to improve bioprocess quantification. Impacts of pressure as well as dilution of reactant gas with up to 70% non-reactive gas on overall process efficiency was evaluated. Pressure in the reactor unit of 11 bar at 65℃ with a pressure of 21 bar for gas purification led to an overall process efficiency comprised between 66% and 70% for gaseous product and between 73% and 76% if heat of compression is considered a valuable product. The combination of 2 bar pressure in the reactor and 21 bar for purification was the most efficient combination of parameters. This result shows Aspen Plus potential for similar bioprocess development as it accounts for the energetic aspect of the entire process. In fact, the optimum for the overall process efficiency was found to differ from the optimum of the reaction unit. High efficiency of over 70% demonstrates that biological methanogenesis is a promising alternative for a chemical methanation reaction.

  16. Basics for sensorimotor information processing: some implications for learning.

    OpenAIRE

    Thierry eHasbroucq; Franck eVidal

    2015-01-01

    AbstractIn sensorimotor activities, learning requires efficient information processing; whether in car driving, sport activities or human-machine interactions. Several factors may affect the efficiency of such processing: they may be extrinsic (i.e. task-related) on intrinsic (i.e. subjects-related). The effects of these factors are intimately related to the structure of human information processing. In the present article we will focus on some of them, which are poorly taken into account, ev...

  17. Reading biological processes from nucleotide sequences

    Science.gov (United States)

    Murugan, Anand

    Cellular processes have traditionally been investigated by techniques of imaging and biochemical analysis of the molecules involved. The recent rapid progress in our ability to manipulate and read nucleic acid sequences gives us direct access to the genetic information that directs and constrains biological processes. While sequence data is being used widely to investigate genotype-phenotype relationships and population structure, here we use sequencing to understand biophysical mechanisms. We present work on two different systems. First, in chapter 2, we characterize the stochastic genetic editing mechanism that produces diverse T-cell receptors in the human immune system. We do this by inferring statistical distributions of the underlying biochemical events that generate T-cell receptor coding sequences from the statistics of the observed sequences. This inferred model quantitatively describes the potential repertoire of T-cell receptors that can be produced by an individual, providing insight into its potential diversity and the probability of generation of any specific T-cell receptor. Then in chapter 3, we present work on understanding the functioning of regulatory DNA sequences in both prokaryotes and eukaryotes. Here we use experiments that measure the transcriptional activity of large libraries of mutagenized promoters and enhancers and infer models of the sequence-function relationship from this data. For the bacterial promoter, we infer a physically motivated 'thermodynamic' model of the interaction of DNA-binding proteins and RNA polymerase determining the transcription rate of the downstream gene. For the eukaryotic enhancers, we infer heuristic models of the sequence-function relationship and use these models to find synthetic enhancer sequences that optimize inducibility of expression. Both projects demonstrate the utility of sequence information in conjunction with sophisticated statistical inference techniques for dissecting underlying biophysical

  18. Sodium removal by alcohol process: Basic tests and its application

    International Nuclear Information System (INIS)

    We have various methods for sodium removal; an alcohol cleaning process, a steam cleaning process and a direct burning process. Sodium removal by the alcohol process has a lot of advantages, such as causing no alkali corrosion to steel, short processing time and easy operation. Therefore the alcohol process was selected for the 1MWt double wall tube straight type steam generator. We have already had some experiences of the alcohol process, while still needed to confirm the sodium removal rate in the crevice and to develop an on-line sodium concentration monitoring method in alcohol during sodium removal. We have conducted the small scale sodium removal test with flowing alcohol where the sodium removal rate in the crevice and the alcohol conductivity were measured as functions of sodium concentration in alcohol and alcohol temperature. The sodium removal of the DWTSG was conducted by the devised alcohol process safely and efficiently. The process hour was about 1 day. Visual inspection during dismantling of the DWTSG showed no evidence of any un-reacted sodium. (author)

  19. Basic physics of the fission process. Chapter 2

    International Nuclear Information System (INIS)

    A general description of the fission process is given with special emphasis on those aspects which are necessary for the understanding of the measurements and calculations of neutron-induced fission cross-sections. Having considered the various phases of the process, some typical properties of the low-energy fission of actinide nuclei are presented and the more specific features of neutron induced fission are examined. (U.K.)

  20. A polynomial-time algorithm for deciding bisimilation equivalence of normed Basic Parallel Processes

    OpenAIRE

    Hirshfeld, Yoram; Jerrum, Mark; Moller, Faron

    1994-01-01

    A polynomial-time algorithm is presented for deciding bisimulation equivalence of so-called Basic Parallel Processes: multisets of elementary processes combined by a commitative parallel-composition operator.

  1. Basic instinct undressed: early spatiotemporal processing for primary sexual characteristics.

    Science.gov (United States)

    Legrand, Lore B; Del Zotto, Marzia; Tyrand, Rémi; Pegna, Alan J

    2013-01-01

    This study investigates the spatiotemporal dynamics associated with conscious and non-conscious processing of naked and dressed human bodies. To this effect, stimuli of naked men and women with visible primary sexual characteristics, as well as dressed bodies, were presented to 20 heterosexual male and female participants while acquiring high resolution EEG data. The stimuli were either consciously detectable (supraliminal presentations) or were rendered non-conscious through backward masking (subliminal presentations). The N1 event-related potential component was significantly enhanced in participants when they viewed naked compared to dressed bodies under supraliminal viewing conditions. More importantly, naked bodies of the opposite sex produced a significantly greater N1 component compared to dressed bodies during subliminal presentations, when participants were not aware of the stimulus presented. A source localization algorithm computed on the N1 showed that the response for naked bodies in the supraliminal viewing condition was stronger in body processing areas, primary visual areas and additional structures related to emotion processing. By contrast, in the subliminal viewing condition, only visual and body processing areas were found to be activated. These results suggest that naked bodies and primary sexual characteristics are processed early in time (i.e., <200 ms) and activate key brain structures even when they are not consciously detected. It appears that, similarly to what has been reported for emotional faces, sexual features benefit from automatic and rapid processing, most likely due to their high relevance for the individual and their importance for the species in terms of reproductive success. PMID:23894532

  2. Basic instinct undressed: early spatiotemporal processing for primary sexual characteristics.

    Directory of Open Access Journals (Sweden)

    Lore B Legrand

    Full Text Available This study investigates the spatiotemporal dynamics associated with conscious and non-conscious processing of naked and dressed human bodies. To this effect, stimuli of naked men and women with visible primary sexual characteristics, as well as dressed bodies, were presented to 20 heterosexual male and female participants while acquiring high resolution EEG data. The stimuli were either consciously detectable (supraliminal presentations or were rendered non-conscious through backward masking (subliminal presentations. The N1 event-related potential component was significantly enhanced in participants when they viewed naked compared to dressed bodies under supraliminal viewing conditions. More importantly, naked bodies of the opposite sex produced a significantly greater N1 component compared to dressed bodies during subliminal presentations, when participants were not aware of the stimulus presented. A source localization algorithm computed on the N1 showed that the response for naked bodies in the supraliminal viewing condition was stronger in body processing areas, primary visual areas and additional structures related to emotion processing. By contrast, in the subliminal viewing condition, only visual and body processing areas were found to be activated. These results suggest that naked bodies and primary sexual characteristics are processed early in time (i.e., <200 ms and activate key brain structures even when they are not consciously detected. It appears that, similarly to what has been reported for emotional faces, sexual features benefit from automatic and rapid processing, most likely due to their high relevance for the individual and their importance for the species in terms of reproductive success.

  3. Optimization criteria and biological process enrichment in homologous multiprotein modules.

    Science.gov (United States)

    Hodgkinson, Luqman; Karp, Richard M

    2013-06-25

    Biological process enrichment is a widely used metric for evaluating the quality of multiprotein modules. In this study, we examine possible optimization criteria for detecting homologous multiprotein modules and quantify their effects on biological process enrichment. We find that modularity, linear density, and module size are the most important criteria considered, complementary to each other, and that graph theoretical attributes account for 36% of the variance in biological process enrichment. Variations in protein interaction similarity within module pairs have only minor effects on biological process enrichment. As random modules increase in size, both biological process enrichment and modularity tend to improve, although modularity does not show this upward trend in modules with size at most 50 proteins. To adjust for these trends, we recommend a size correction based on random sampling of modules when using biological process enrichment or other attributes to evaluate module boundaries. Characteristics of homologous multiprotein modules optimized for each of the optimization criteria are examined. PMID:23757502

  4. Basic Processes in Reading: The Effect of Interletter Spacing

    Science.gov (United States)

    Risko, Evan F.; Lanthier, Sophie N.; Besner, Derek

    2011-01-01

    Reading is acutely sensitive to the amount of space between letters within a string. In the present investigation, we explore the impairment caused by increasing interletter spacing when reading single words and nonwords aloud. Specifically, 2 hypotheses are tested: (a) whether increasing interletter spacing induces serial processing while reading…

  5. Basic Instinct Undressed: Early Spatiotemporal Processing for Primary Sexual Characteristics

    OpenAIRE

    Legrand, Lore; Del Zotto, Marzia; Tyrand, Rémi; Pegna, Alan

    2013-01-01

    This study investigates the spatiotemporal dynamics associated with conscious and non-conscious processing of naked and dressed human bodies. To this effect, stimuli of naked men and women with visible primary sexual characteristics, as well as dressed bodies, were presented to 20 heterosexual male and female participants while acquiring high resolution EEG data. The stimuli were either consciously detectable (supraliminal presentations) or were rendered non-conscious through backward masking...

  6. Basics for sensorimotor information processing: some implications for learning.

    Directory of Open Access Journals (Sweden)

    Thierry eHasbroucq

    2015-02-01

    Full Text Available AbstractIn sensorimotor activities, learning requires efficient information processing; whether in car driving, sport activities or human-machine interactions. Several factors may affect the efficiency of such processing: they may be extrinsic (i.e. task-related on intrinsic (i.e. subjects-related. The effects of these factors are intimately related to the structure of human information processing. In the present article we will focus on some of them, which are poorly taken into account, even when minimizing errors or their consequences is an essential issue at stake. Among the extrinsic factors, we will discuss, first, the effects of the quantity and quality of information, secondly, the effects of instruction and thirdly motor program learning. Among the intrinsic factors, we will discuss first the influence of prior information, secondly how individual strategies affect performance and, thirdly, we will stress the fact that although the human brain is not structured to function errorless (which is not a new humans are able to detect their errors very quickly and (in most of the cases, fast enough to correct them before they result in an overt failure.

  7. Isolation and biological characterization of a basic phospholipase A2 from Bothrops jararacussu snake venom

    Directory of Open Access Journals (Sweden)

    S.L. Maruñak

    2007-12-01

    Full Text Available A phospholipase A2 has been isolated from Bothrops jararacussu venom from snakes that inhabit the northeast region of Argentina. The present study describes in vivo and in vitro biological activities of phospholipase A2 from B. jararacussu as well as isolation details of its. Venom was obtained by milking of adult snakes which were housing in wood reptile cages of varying dimensions in heated (20-30ºC rooms. Snakes received a weekly diet of mice and water was available ad libitum for drinking and soaking. The enzyme was purified by gel filtration on a Sephadex G-75 column followed by ion exchange chromatography on a SP-Sephadex C25 column. The major peak belonging to proteins was retained in the cation exchanger and then eluted using a concentration gradient of KCl that exhibited phospholipase activity. This basic PLA2 consists of a single polypeptide chain with a molecular mass of 15.6 kDa. It had a high indirect hemolytic activity and produced a significant paw edema reaction in mice. The enzyme showed a low lethality (LD50 148.6 mg when was administered i.p. but exhibited elevated myotoxic effects in vivo by increasing plasma CK activity of injected mice, corroborated results by the histological observations of samples of gastrocnemius muscle. Myonecrosis is the result of intense destruction of muscular fibers that involves local infiltration of inflammatory cells and leads to the highest peak of CK level just after 1 hour mice injection. Moreover, the isolated enzyme showed anticoagulant activity, evaluated on sheep platelet-poor plasma which recalcification time was prolonged after incubation with the isolated phospholipase A2. These findings showed that this phospholipase, isolated by only two simple chromatographic steps, possesses high edematogenic and myotoxic activities. However, despite the low lethal activity, this enzyme would contribute markedly to the pathophysiology of the bothropic envenomation.

  8. Exploiting graphics processing units for computational biology and bioinformatics.

    Science.gov (United States)

    Payne, Joshua L; Sinnott-Armstrong, Nicholas A; Moore, Jason H

    2010-09-01

    Advances in the video gaming industry have led to the production of low-cost, high-performance graphics processing units (GPUs) that possess more memory bandwidth and computational capability than central processing units (CPUs), the standard workhorses of scientific computing. With the recent release of generalpurpose GPUs and NVIDIA's GPU programming language, CUDA, graphics engines are being adopted widely in scientific computing applications, particularly in the fields of computational biology and bioinformatics. The goal of this article is to concisely present an introduction to GPU hardware and programming, aimed at the computational biologist or bioinformaticist. To this end, we discuss the primary differences between GPU and CPU architecture, introduce the basics of the CUDA programming language, and discuss important CUDA programming practices, such as the proper use of coalesced reads, data types, and memory hierarchies. We highlight each of these topics in the context of computing the all-pairs distance between instances in a dataset, a common procedure in numerous disciplines of scientific computing. We conclude with a runtime analysis of the GPU and CPU implementations of the all-pairs distance calculation. We show our final GPU implementation to outperform the CPU implementation by a factor of 1700. PMID:20658333

  9. ROLE OF BIOLOGICAL PROCESSES IN TECHNOLOGY OF GROUND WATER TREATMENT

    Directory of Open Access Journals (Sweden)

    Yu. P. Sedluho

    2008-01-01

    Full Text Available Technological peculiar features of biocenosis development in water treatment facilities and a role of biological processes in the technology of ground water treatment are considered in the paper. The paper provides main factors that influence on biological process development.

  10. Adsorption Dynamics of Calyx Aroma onto Basic Tea in Scenting Process of Calyx-scented Tea

    Institute of Scientific and Technical Information of China (English)

    Changhui CHEN

    2012-01-01

    [Objective] The paper was to study adsorption dynamics of calyx aroma onto basic tea in scenting process of calyx-scented tea, so as to increase aroma and quality of products. [Method] Adsorption experiment was carried out in a hermetic container, and the effect of calyx amount, contact time, moisture content of basic tea and temperature on the scenting process was studied. [Result] The optimal moisture and temperature for scenting process was 4% and 10 ℃, respectively. [Conclusion] The scenting process accorded pseudo-first-order kinetic model, and the adsorption dynamic data of total process could better fit pseudo-second-order kinetic model.

  11. Death in the intestinal epithelium-basic biology and implications for inflammatory bowel disease.

    Science.gov (United States)

    Blander, J Magarian

    2016-07-01

    Every 4-5 days, intestinal epithelial cells (IEC) are terminated as they reach the end of their life. This process ensures that the epithelium is comprised of the fittest cells that maintain an impermeable barrier to luminal contents and the gut microbiota, as well as the most metabolically able cells that conduct functions in nutrient absorption, digestion, and secretion of antimicrobial peptides. IEC are terminated by apical extrusion-or shedding-from the intestinal epithelial monolayer into the gut lumen. Whether death by apoptosis signals extrusion or death follows expulsion by younger IEC has been a matter of debate. Seemingly a minor detail, IEC death before or after apical extrusion bears weight on the potential contribution of apoptotic IEC to intestinal homeostasis as a consequence of their recognition by intestinal lamina propria phagocytes. In inflammatory bowel disease (IBD), excessive death is observed in the ileal and colonic epithelium. The precise mode of IEC death in IBD is not defined. A highly inflammatory milieu within the intestinal lamina propria, rich in the proinflammatory cytokine, TNF-α, increases IEC shedding and compromises barrier integrity fueling more inflammation. A milestone in the treatment of IBD, anti-TNF-α therapy, may promote mucosal healing by reversing increased and inflammation-associated IEC death. Understanding the biology and consequences of cell death in the intestinal epithelium is critical to the design of new avenues for IBD therapy. PMID:27250564

  12. Symbiotic grasses: A review of basic biology of forage grass fungal endophytes

    Science.gov (United States)

    The fungal endophytes associated with grasses are the fundamental reason for the basic successes of several pasture grasses, notable tall fescues, and perennial ryegrass. Tall fescue and perennial ryegrass fungal endophytes, Neotyphodium coenophialum and N. lolii, respectively, and their relatives ...

  13. Bridging the gap between basic and applied biology: towards preclinical translation

    OpenAIRE

    Cagan, Ross L; Justice, Monica J.; George F. Tidmarsh

    2013-01-01

    Summary To better translate basic research findings into the clinic, we are moving away from the traditional one-gene–one-phenotype model towards the discovery of complex mechanisms. In this Editorial, the new Editor-in-Chief and Senior Editors of Disease Models & Mechanisms (DMM) discuss the role that the journal will play in this transition. DMM will continue to provide a platform for studies that bridge basic and applied science, and, by demanding the rigorous assessment of animal model...

  14. INFLUENCING OF BASIC FUNCTIONINGS INDEXES OF STORAGES ON PRIME PRICE OF CONTAINER-PIECE LOADS PROCESSING

    OpenAIRE

    Severyn, A.; Shulika, О.; Il'chenko, R.

    2008-01-01

    The structure of ware-house technology of loads processing has been determined, a mathematical model has been built, dependence of prime price of the loads ware-house processing on the basic indexes of storages functioning has been set and the analysis of these indexes influencing on the prime price of processing has been carried out.

  15. Recent Developments in Biological Hydrogen Production Processes

    Directory of Open Access Journals (Sweden)

    DEBABRATA DAS

    2008-07-01

    Full Text Available Biohydrogen production technology can utilize renewable energy sources like biomass for the generation of hydrogen, the cleanest form of energy for the use of mankind. However, major constraints to the commercialization of these processes include lower hydrogen yields and rates of hydrogen production. To overcome these bottlenecks intensive research work has already been carried out on the advancement of these processes such as the development of genetically modified microorganisms, the improvement of the bioreactor design, molecular engineering of the key enzyme hydrogenases, the development of two stage processes, etc. The present paper explores the recent advancements that have been made till date and also presents the state of the art in molecular strategies to improve the hydrogen production.

  16. Update on the genomics and basic biology of Brachypodium

    DEFF Research Database (Denmark)

    Catalan, Pilar; Chalhoub, Boulos; Chochois, Vincent; Garvin, David F.; Hasterok, Robert; Manzaneda, Antonio J.; Mur, Luis A.J.; Pecchioni, Nicola; Rasmussen, Søren Kjærsgaard; Vogel, John P.; Voxeur, Aline

    2014-01-01

    , abiotic and biotic stress, comparative genomics, natural diversity, and cell walls) demonstrates that the Brachypodium research community has achieved a critical mass of tools and has transitioned from resource development to addressing biological questions, particularly those unique to grasses...

  17. Landauer in the Age of Synthetic Biology: Energy Consumption and Information Processing in Biochemical Networks

    Science.gov (United States)

    Mehta, Pankaj; Lang, Alex H.; Schwab, David J.

    2016-03-01

    A central goal of synthetic biology is to design sophisticated synthetic cellular circuits that can perform complex computations and information processing tasks in response to specific inputs. The tremendous advances in our ability to understand and manipulate cellular information processing networks raises several fundamental physics questions: How do the molecular components of cellular circuits exploit energy consumption to improve information processing? Can one utilize ideas from thermodynamics to improve the design of synthetic cellular circuits and modules? Here, we summarize recent theoretical work addressing these questions. Energy consumption in cellular circuits serves five basic purposes: (1) increasing specificity, (2) manipulating dynamics, (3) reducing variability, (4) amplifying signal, and (5) erasing memory. We demonstrate these ideas using several simple examples and discuss the implications of these theoretical ideas for the emerging field of synthetic biology. We conclude by discussing how it may be possible to overcome these limitations using "post-translational" synthetic biology that exploits reversible protein modification.

  18. Quantum chemical methods for the investigation of photoinitiated processes in biological systems: theory and applications.

    Science.gov (United States)

    Dreuw, Andreas

    2006-11-13

    With the advent of modern computers and advances in the development of efficient quantum chemical computer codes, the meaningful computation of large molecular systems at a quantum mechanical level became feasible. Recent experimental effort to understand photoinitiated processes in biological systems, for instance photosynthesis or vision, at a molecular level also triggered theoretical investigations in this field. In this Minireview, standard quantum chemical methods are presented that are applicable and recently used for the calculation of excited states of photoinitiated processes in biological molecular systems. These methods comprise configuration interaction singles, the complete active space self-consistent field method, and time-dependent density functional theory and its variants. Semiempirical approaches are also covered. Their basic theoretical concepts and mathematical equations are briefly outlined, and their properties and limitations are discussed. Recent successful applications of the methods to photoinitiated processes in biological systems are described and theoretical tools for the analysis of excited states are presented. PMID:17009357

  19. ADVANCES OF BASIC MOLECULAR BIOLOGY TECHNIQUES: POTENTIAL TO APPLY IN PLANT VIROID DETECTION IN SRI LANKA

    OpenAIRE

    Yapa M.A.M. Wijerathna

    2012-01-01

    Viroids are the smallest pathogens of plants. They are the cause of serious diseases on economic plants worldwide. Prevention and detection of the pathogens are the best method to reduce the economic loss from viroid infection. During last decade, genetics and molecular biology techniques have gained an increasing presence in plant pathology research. The purpose of this review is to highlight the most upgrade molecular biology techniques that have been used and studied recently. Most relevan...

  20. Bridging the gap between basic and applied biology: towards preclinical translation

    Directory of Open Access Journals (Sweden)

    Ross L. Cagan

    2013-05-01

    To better translate basic research findings into the clinic, we are moving away from the traditional one-gene–one-phenotype model towards the discovery of complex mechanisms. In this Editorial, the new Editor-in-Chief and Senior Editors of Disease Models & Mechanisms (DMM discuss the role that the journal will play in this transition. DMM will continue to provide a platform for studies that bridge basic and applied science, and, by demanding the rigorous assessment of animal models of disease, will help drive the establishment of robust standards of preclinical testing for drug development.

  1. Bridging the gap between basic and applied biology: towards preclinical translation.

    Science.gov (United States)

    Cagan, Ross L; Justice, Monica J; Tidmarsh, George F

    2013-05-01

    To better translate basic research findings into the clinic, we are moving away from the traditional one-gene-one-phenotype model towards the discovery of complex mechanisms. In this Editorial, the new Editor-in-Chief and Senior Editors of Disease Models & Mechanisms (DMM) discuss the role that the journal will play in this transition. DMM will continue to provide a platform for studies that bridge basic and applied science, and, by demanding the rigorous assessment of animal models of disease, will help drive the establishment of robust standards of preclinical testing for drug development. PMID:23616075

  2. Summing up dynamics: modelling biological processes in variable temperature scenarios

    NARCIS (Netherlands)

    Tijskens, L.M.M.; Verdenius, F.

    2000-01-01

    The interest of modelling biological processes with dynamically changing external conditions (temperature, relative humidity, gas conditions) increases. Several modelling approaches are currently available. Among them are approaches like modelling under standard conditions, temperature sum models an

  3. Basic model study on efficiency evaluation in collaborative design work process

    Institute of Scientific and Technical Information of China (English)

    XIE Qiu; YANG Yu; LI Xiaoli; ZHAO Ningyu

    2007-01-01

    During the efficiency evaluation process of collaborative design work,because of the lack of efficiency evaluation models,a basic analytical model for collaborative design work efficiency evaluation is proposed in this paper.First,the characteristics of the networked collaborative design system work process were studied; then,in accordance with those characteristics,a basic analytical model is created.This model,which is built for centralized collaborative design work,includes an analytical frame,a process view model,a function view model and an information view model.Finally,the application process and steps of this basic analytical model are elaborated when used for efficiency evaluation through an experiment.

  4. Introduction to Computer Programming--Basic, Data Processing Technology: 8025.15.

    Science.gov (United States)

    Dade County Public Schools, Miami, FL.

    Outlined in this pamphlet are basic activities to teach students flowcharting techniques, logic principles, machine description, various memory storage devices, binary arithmetic, and input/output devices. Data processing principles are reviewed. The course objective is to prepare students for advanced courses in data processing. Course goals,…

  5. Developing a Process-Oriented Translation Test for Assessing English-Arabic Basic Translation Skills

    Science.gov (United States)

    Abdellah, Antar Solhy

    2007-01-01

    The study reviews translation validated tests and proposes a process-oriented translation test for assessing basic translation skills for freshmen English majors at the faculty of Education. The proposed test is developed based on the process approach to translating and translation teaching, and is confined to translation from English to Arabic.…

  6. Reformation of organization and realization of budgetary process: basic directions, problems and ways of their solution

    Directory of Open Access Journals (Sweden)

    E.B. Ponomarenko

    2015-12-01

    Full Text Available The article is dedicated to the research of the basic problems of organization and realization of budgetary process in the country on the modern stage. A budgetary process is one of the main levers which is able really to provide management of an economy under conditions of a market economy. Organizational and administrative structures of the budgetary process are ineffective in Ukraine. In spite of more than twenty-year old history, the budgetary process of Ukraine has the row of unsolved problems. For this reason there is the necessity in deep theoretical rethinking and methodological work at approaches to the budgetary process. We consider it is wise to find out the basic problems which arise during organization and realization of the budgetary process in Ukraine. The study of the matter results in the complex of recommendations which are able to provide effective realization of the budgetary process in Ukraine and solve a number of problem questions.

  7. ADVANCES OF BASIC MOLECULAR BIOLOGY TECHNIQUES: POTENTIAL TO APPLY IN PLANT VIROID DETECTION IN SRI LANKA

    Directory of Open Access Journals (Sweden)

    Yapa M.A.M. Wijerathna

    2012-12-01

    Full Text Available Viroids are the smallest pathogens of plants. They are the cause of serious diseases on economic plants worldwide. Prevention and detection of the pathogens are the best method to reduce the economic loss from viroid infection. During last decade, genetics and molecular biology techniques have gained an increasing presence in plant pathology research. The purpose of this review is to highlight the most upgrade molecular biology techniques that have been used and studied recently. Most relevant published reports and hand skilled techniques have presented here with emphasis on suitable Viroid detection technique should be used for Sri Lanka.

  8. Using Restriction Mapping to Teach Basic Skills in the Molecular Biology Lab

    Science.gov (United States)

    Walsh, Lauren; Shaker, Elizabeth; De Stasio, Elizabeth A.

    2007-01-01

    Digestion of DNA with restriction enzymes, calculation of volumes and concentrations of reagents for reactions, and the separation of DNA fragments by agarose gel electrophoresis are common molecular biology techniques that are best taught through repetition. The following open-ended, investigative laboratory exercise in plasmid restriction…

  9. BASIC SYNTHESIS AND BIOLOGICAL ACTIVITY OF SOME PHOSPHORCONTATNING ORGANIC COMPOUNDS CONTAINING FRAGMENTS OF UREA AND TRYHLORETILAMID

    Directory of Open Access Journals (Sweden)

    Gushylyk B.

    2013-10-01

    Full Text Available Data about directions of synthesis and use of the phosphororganic compounds in technics, biology and medicine is presented in the paper. Antimicrobial activity of 51 phosphororganic salts and ilides containing urine and threechlor ethylenamide has been studied. Perspective of the development of effective antimicrobial substances has been determined

  10. Methodology for Process Improvement Through Basic Components and Focusing on the Resistance to Change.

    OpenAIRE

    Calvo-Manzano Villalon, Jose Antonio; Cuevas Agustin, Gonzalo; Gómez, Gerzón; Mejia, Jezreel; Muñoz, Mirna; San Feliu Gilabert, Tomas

    2010-01-01

    This paper describes a multi-model methodology that implements a smooth and continuous process improvement, depending on the organization's business goals and allowing users to establish their improvement implementation pace. The methodology focuses on basic process components known as ‘best practices’. Besides, it covers following the topics: knowledge management and change management. The methodology description and the results of a case study on project management process are included.

  11. Synthetic Biology: Tools to Design, Build, and Optimize Cellular Processes

    Directory of Open Access Journals (Sweden)

    Eric Young

    2010-01-01

    Full Text Available The general central dogma frames the emergent properties of life, which make biology both necessary and difficult to engineer. In a process engineering paradigm, each biological process stream and process unit is heavily influenced by regulatory interactions and interactions with the surrounding environment. Synthetic biology is developing the tools and methods that will increase control over these interactions, eventually resulting in an integrative synthetic biology that will allow ground-up cellular optimization. In this review, we attempt to contextualize the areas of synthetic biology into three tiers: (1 the process units and associated streams of the central dogma, (2 the intrinsic regulatory mechanisms, and (3 the extrinsic physical and chemical environment. Efforts at each of these three tiers attempt to control cellular systems and take advantage of emerging tools and approaches. Ultimately, it will be possible to integrate these approaches and realize the vision of integrative synthetic biology when cells are completely rewired for biotechnological goals. This review will highlight progress towards this goal as well as areas requiring further research.

  12. Mesenchymal Stem Cells Isolated from Adipose and Other Tissues: Basic Biological Properties and Clinical Applications

    Directory of Open Access Journals (Sweden)

    Hakan Orbay

    2012-01-01

    Full Text Available Mesenchymal stem cells (MSCs are adult stem cells that were initially isolated from bone marrow. However, subsequent research has shown that other adult tissues also contain MSCs. MSCs originate from mesenchyme, which is embryonic tissue derived from the mesoderm. These cells actively proliferate, giving rise to new cells in some tissues, but remain quiescent in others. MSCs are capable of differentiating into multiple cell types including adipocytes, chondrocytes, osteocytes, and cardiomyocytes. Isolation and induction of these cells could provide a new therapeutic tool for replacing damaged or lost adult tissues. However, the biological properties and use of stem cells in a clinical setting must be well established before significant clinical benefits are obtained. This paper summarizes data on the biological properties of MSCs and discusses current and potential clinical applications.

  13. Electron beam/biological processing of anaerobic and aerobic sludge

    International Nuclear Information System (INIS)

    Besides common chemical and biological methods, the radiation technology is a promising way of sludge treatment. The paper describes possibilities of combined accelerated electrons/biological processing of both anaerobic and aerobic sludge. Besides one-shot experiments, experimental reactors for the simulation of anaerobic processes have been used. Main effort has been aimed to decrease organic compounds concentration and overall volume of solids, to improve some physico-chemical parameters of sludge, to validate hygienisation effects of the ionising radiation, and in the case of anaerobic sludge, to increase the volume of the produced biogas. Positive effects of the electron beam processing have been observed on all previously named parameters. (author)

  14. Investigations of biological processes in Austrian MBT plants

    International Nuclear Information System (INIS)

    Mechanical biological treatment (MBT) of municipal solid waste (MSW) has become an important technology in waste management during the last decade. The paper compiles investigations of mechanical biological processes in Austrian MBT plants. Samples from all plants representing different stages of degradation were included in this study. The range of the relevant parameters characterizing the materials and their behavior, e.g. total organic carbon, total nitrogen, respiration activity and gas generation sum, was determined. The evolution of total carbon and nitrogen containing compounds was compared and related to process operation. The respiration activity decreases in most of the plants by about 90% of the initial values whereas the ammonium release is still ongoing at the end of the biological treatment. If the biogenic waste fraction is not separated, it favors humification in MBT materials that is not observed to such extent in MSW. The amount of organic carbon is about 15% dry matter at the end of the biological treatment.

  15. Investigations of biological processes in Austrian MBT plants.

    Science.gov (United States)

    Tintner, J; Smidt, E; Böhm, K; Binner, E

    2010-10-01

    Mechanical biological treatment (MBT) of municipal solid waste (MSW) has become an important technology in waste management during the last decade. The paper compiles investigations of mechanical biological processes in Austrian MBT plants. Samples from all plants representing different stages of degradation were included in this study. The range of the relevant parameters characterizing the materials and their behavior, e.g. total organic carbon, total nitrogen, respiration activity and gas generation sum, was determined. The evolution of total carbon and nitrogen containing compounds was compared and related to process operation. The respiration activity decreases in most of the plants by about 90% of the initial values whereas the ammonium release is still ongoing at the end of the biological treatment. If the biogenic waste fraction is not separated, it favors humification in MBT materials that is not observed to such extent in MSW. The amount of organic carbon is about 15% dry matter at the end of the biological treatment. PMID:20580543

  16. Biological and Biomedical Coatings Handbook Processing and Characterization

    CERN Document Server

    Zhang, Sam

    2011-01-01

    Written in a versatile, contemporary style that will benefit both novice and expert alike, Biological and Biomedical Coatings Handbook, Two-Volume Set covers the state of the art in the development and implementation of advanced thin films and coatings in the biological field. Consisting of two volumes--Processing and Characterization and Applications--this handbook details the latest understanding of advances in the design and performance of biological and biomedical coatings, covering a vast array of material types, including bio-ceramics, polymers, glass, chitosan, and nanomaterials. Contri

  17. Hidden Markov processes theory and applications to biology

    CERN Document Server

    Vidyasagar, M

    2014-01-01

    This book explores important aspects of Markov and hidden Markov processes and the applications of these ideas to various problems in computational biology. The book starts from first principles, so that no previous knowledge of probability is necessary. However, the work is rigorous and mathematical, making it useful to engineers and mathematicians, even those not interested in biological applications. A range of exercises is provided, including drills to familiarize the reader with concepts and more advanced problems that require deep thinking about the theory. Biological applications are t

  18. Workplace Basic Skills in the Metal Casting Industry for World Class Process and Technology.

    Science.gov (United States)

    Rasmussen, Bonnie

    A workplace basic skills project for the metal casting industry was established jointly by Central Alabama Community College and Robinson Foundry, Inc. Evaluation of the project was made through a commercial test of hourly workers' general literacy level gains, instructor-developed pre- and posttests of mastery of the industrial process and…

  19. Neural processing of basic tastes in healthy young and older adults - an fMRI study

    NARCIS (Netherlands)

    Hoogeveen, Heleen R.; Dalenberg, Jelle R.; Renken, Remco J.; ter Horst, Gert J.; Lorist, Monicque M.

    2015-01-01

    Ageing affects taste perception as shown in psychophysical studies, however, underlying structural and functional mechanisms of these changes are still largely unknown. To investigate the neurobiology of age-related differences associated with processing of basic tastes, we measured brain activation

  20. Psychological Aspects of Aging. Module A-7. Block A. Basic Knowledge of the Aging Process.

    Science.gov (United States)

    Harvey, Dexter; Cap, Orest

    This instructional module on psychological aspects of aging is one in a block of 10 modules designed to provide the human services worker who works with older adults with basic information regarding the aging process. An introduction provides an overview of the module content. A listing of general objectives follows. Six sections present…

  1. Formulae and figures for basic two-body QCD processes in ep interaction

    International Nuclear Information System (INIS)

    A compilation of some useful formulae is given for basic 2→2 processes involving quarks, gluons and photons. The formulae are illustrated by evaluation of some partonic cross sections, parton luminosities and ep cross sections at HERA and LEPxLHC energies. (orig.)

  2. Process efficiency simulation for key process parameters in biological methanogenesis

    OpenAIRE

    Sébastien Bernacchi; Michaela Weissgram; Walter Wukovits; Christoph Herwig

    2014-01-01

    New generation biofuels are a suitable approach to produce energy carriers in an almost CO2 neutral way. A promising reaction is the conversion of CO2 and H2 to CH4. This contribution aims at elucidating a bioprocess comprised of a core reaction unit using microorganisms from the Archaea life domain, which metabolize CO2 and H2 to CH4, followed by a gas purification step. The process is simulated and analyzed thermodynamically using the Aspen Plus process simulation environment. The goal of t...

  3. Using restriction mapping to teach basic skills in the molecular biology lab.

    Science.gov (United States)

    Walsh, Lauren; Shaker, Elizabeth; De Stasio, Elizabeth A

    2007-05-01

    Digestion of DNA with restriction enzymes, calculation of volumes and concentrations of reagents for reactions, and the separation of DNA fragments by agarose gel electrophoresis are common molecular biology techniques that are best taught through repetition. The following open-ended, investigative laboratory exercise in plasmid restriction mapping allows students to gain technical expertise while simultaneously exploring the utility of gel electrophoresis and restriction mapping. Because of its interpretive nature, this project also provides data suitable for a written report, and can thus be used to reinforce lessons on figure presentation and science writing skills. PMID:21591089

  4. Is metabolic rate a universal 'pacemaker' for biological processes?

    Science.gov (United States)

    Glazier, Douglas S

    2015-05-01

    A common, long-held belief is that metabolic rate drives the rates of various biological, ecological and evolutionary processes. Although this metabolic pacemaker view (as assumed by the recent, influential 'metabolic theory of ecology') may be true in at least some situations (e.g. those involving moderate temperature effects or physiological processes closely linked to metabolism, such as heartbeat and breathing rate), it suffers from several major limitations, including: (i) it is supported chiefly by indirect, correlational evidence (e.g. similarities between the body-size and temperature scaling of metabolic rate and that of other biological processes, which are not always observed) - direct, mechanistic or experimental support is scarce and much needed; (ii) it is contradicted by abundant evidence showing that various intrinsic and extrinsic factors (e.g. hormonal action and temperature changes) can dissociate the rates of metabolism, growth, development and other biological processes; (iii) there are many examples where metabolic rate appears to respond to, rather than drive the rates of various other biological processes (e.g. ontogenetic growth, food intake and locomotor activity); (iv) there are additional examples where metabolic rate appears to be unrelated to the rate of a biological process (e.g. ageing, circadian rhythms, and molecular evolution); and (v) the theoretical foundation for the metabolic pacemaker view focuses only on the energetic control of biological processes, while ignoring the importance of informational control, as mediated by various genetic, cellular, and neuroendocrine regulatory systems. I argue that a comprehensive understanding of the pace of life must include how biological activities depend on both energy and information and their environmentally sensitive interaction. This conclusion is supported by extensive evidence showing that hormones and other regulatory factors and signalling systems coordinate the processes of

  5. Qualitative analysis of biological oscillators as processing structures

    OpenAIRE

    Bordon, Jure

    2011-01-01

    Recently there is a certain tendency in the field of computer science to find alternative processing platforms, which would replace the conventional ones that are starting to reach their limits in the meaning of components' size and speed. Computer science is trying to avoid its dependency on traditional electronic components. One of such alternatives is also processing in biological systems. Whatever the future processing platform might be, computer science will most likely always need a com...

  6. State of the art of biological hydrogen production processes

    International Nuclear Information System (INIS)

    Our report gives an overview of hydrogen production processes with bacteria or algae. 4 main processes are described: water biophotolysis, photo- fermentation biological CO conversion and dark fermentation. Chemical phenomena which lead to hydrogen generation are exp/aired. Performances, limits and outlook are given for each process. Main projects, programs and key players involved in this field of research have been listed. This paper resumes few results of this report. (authors)

  7. Site-selective protein-modification chemistry for basic biology and drug development

    Science.gov (United States)

    Krall, Nikolaus; da Cruz, Filipa P.; Boutureira, Omar; Bernardes, Gonçalo J. L.

    2016-02-01

    Nature has produced intricate machinery to covalently diversify the structure of proteins after their synthesis in the ribosome. In an attempt to mimic nature, chemists have developed a large set of reactions that enable post-expression modification of proteins at pre-determined sites. These reactions are now used to selectively install particular modifications on proteins for many biological and therapeutic applications. For example, they provide an opportunity to install post-translational modifications on proteins to determine their exact biological roles. Labelling of proteins in live cells with fluorescent dyes allows protein uptake and intracellular trafficking to be tracked and also enables physiological parameters to be measured optically. Through the conjugation of potent cytotoxicants to antibodies, novel anti-cancer drugs with improved efficacy and reduced side effects may be obtained. In this Perspective, we highlight the most exciting current and future applications of chemical site-selective protein modification and consider which hurdles still need to be overcome for more widespread use.

  8. Process engineering in biological aerobic waste-water treatment

    Energy Technology Data Exchange (ETDEWEB)

    Gavrilescu, M.; Macoveanu, M. [Technical Univ. Gh. Asachi, Iasi (Romania). Dept. of Environmental Engineering

    1999-11-01

    A non-comprehensive review of several technical developments in the field of aerobic biological waste-water treatment engineering is carried out, considering the active role the engineers have to play in this field. This paper brings together conventional and advanced problems in the field of aerobic biological waste-water treatment. Such an overview of biological waste-water treatment also precedes comments on some important aspects concerning the microorganisms responsible for waste-water treatment as well as consideration of the application of fundamentals and kinetics to the analysis of the biological processes used most commonly for aerobic biological waste-water treatment. A survey of the development of the biological activated-sludge process and some modifications are given. Some problems implied in the conventional activated-sludge waste-water treatment are analyzed, considering conventional processes and bioreactor models (the continuous stirred-tank reactor model and the plug-flow reactor models of the activated-sludge process) as well as aerated lagoons. Further, modifications of the activated-sludge process are presented. These include additional details on the bioreactor progress and applications, with emphasis on aspects concerning airlift bioreactors and their variants, deep-shaft bioreactors and reciprocating jet bioreactors which are considered as the third generation of bioreactors owing to their important advantages in design, operation and performance in waste-water treatment. Sequencing-batch reactors and aerobic digestion processes, including conventional aerobic digestion, high-purity oxygen digestion, thermophilic aerobic digestion and cryophylic aerobic digestion are also reviewed. Finally, some aspects regarding the operational factors that are involved in the selection of the reactor type are included. (orig.)

  9. Biologic

    CERN Document Server

    Kauffman, L H

    2002-01-01

    In this paper we explore the boundary between biology and the study of formal systems (logic). In the end, we arrive at a summary formalism, a chapter in "boundary mathematics" where there are not only containers but also extainers ><, entities open to interaction and distinguishing the space that they are not. The boundary algebra of containers and extainers is to biologic what boolean algebra is to classical logic. We show how this formalism encompasses significant parts of the logic of DNA replication, the Dirac formalism for quantum mechanics, formalisms for protein folding and the basic structure of the Temperley Lieb algebra at the foundations of topological invariants of knots and links.

  10. Boolean Models of Biological Processes Explain Cascade-Like Behavior.

    Science.gov (United States)

    Chen, Hao; Wang, Guanyu; Simha, Rahul; Du, Chenghang; Zeng, Chen

    2016-01-01

    Biological networks play a key role in determining biological function and therefore, an understanding of their structure and dynamics is of central interest in systems biology. In Boolean models of such networks, the status of each molecule is either "on" or "off" and along with the molecules interact with each other, their individual status changes from "on" to "off" or vice-versa and the system of molecules in the network collectively go through a sequence of changes in state. This sequence of changes is termed a biological process. In this paper, we examine the common perception that events in biomolecular networks occur sequentially, in a cascade-like manner, and ask whether this is likely to be an inherent property. In further investigations of the budding and fission yeast cell-cycle, we identify two generic dynamical rules. A Boolean system that complies with these rules will automatically have a certain robustness. By considering the biological requirements in robustness and designability, we show that those Boolean dynamical systems, compared to an arbitrary dynamical system, statistically present the characteristics of cascadeness and sequentiality, as observed in the budding and fission yeast cell- cycle. These results suggest that cascade-like behavior might be an intrinsic property of biological processes. PMID:26821940

  11. The role of phenotypic switching in the basic biology and pathogenesis of Candida albicans

    Directory of Open Access Journals (Sweden)

    David R. Soll

    2014-01-01

    Full Text Available The “white-opaque” transition in Candida albicans was discovered in 1987. For the next fifteen years, a significant body of knowledge accumulated that included differences between the cell types in gene expression, cellular architecture and virulence in cutaneous and systemic mouse models. However, it was not until 2002 that we began to understand the role of switching in the life history of this pathogen, the role of the mating type locus and the molecular pathways that regulated it. Then in 2006, both the master switch locus WORI and the pheromone-induced white cell biofilm were discovered. Since that year, a number of new observations on the regulation and biology of switching have been made that have significantly increased the perceived complexity of this fascinating phenotypic transition.

  12. Discovering Networks of Perturbed Biological Processes in Hepatocyte Cultures

    Science.gov (United States)

    Lasher, Christopher D.; Rajagopalan, Padmavathy; Murali, T. M.

    2011-01-01

    The liver plays a vital role in glucose homeostasis, the synthesis of bile acids and the detoxification of foreign substances. Liver culture systems are widely used to test adverse effects of drugs and environmental toxicants. The two most prevalent liver culture systems are hepatocyte monolayers (HMs) and collagen sandwiches (CS). Despite their wide use, comprehensive transcriptional programs and interaction networks in these culture systems have not been systematically investigated. We integrated an existing temporal transcriptional dataset for HM and CS cultures of rat hepatocytes with a functional interaction network of rat genes. We aimed to exploit the functional interactions to identify statistically significant linkages between perturbed biological processes. To this end, we developed a novel approach to compute Contextual Biological Process Linkage Networks (CBPLNs). CBPLNs revealed numerous meaningful connections between different biological processes and gene sets, which we were successful in interpreting within the context of liver metabolism. Multiple phenomena captured by CBPLNs at the process level such as regulation, downstream effects, and feedback loops have well described counterparts at the gene and protein level. CBPLNs reveal high-level linkages between pathways and processes, making the identification of important biological trends more tractable than through interactions between individual genes and molecules alone. Our approach may provide a new route to explore, analyze, and understand cellular responses to internal and external cues within the context of the intricate networks of molecular interactions that control cellular behavior. PMID:21245926

  13. Basic Data Report -- Defense Waste Processing Facility Sludge Plant, Savannah River Plant 200-S Area

    Energy Technology Data Exchange (ETDEWEB)

    Amerine, D.B.

    1982-09-01

    This Basic Data Report for the Defense Waste Processing Facility (DWPF)--Sludge Plant was prepared to supplement the Technical Data Summary. Jointly, the two reports were intended to form the basis for the design and construction of the DWPF. To the extent that conflicting information may appear, the Basic Data Report takes precedence over the Technical Data Summary. It describes project objectives and design requirements. Pertinent data on the geology, hydrology, and climate of the site are included. Functions and requirements of the major structures are described to provide guidance in the design of the facilities. Revision 9 of the Basic Data Report was prepared to eliminate inconsistencies between the Technical Data Summary, Basic Data Report and Scopes of Work which were used to prepare the September, 1982 updated CAB. Concurrently, pertinent data (material balance, curie balance, etc.) have also been placed in the Basic Data Report. It is intended that these balances be used as a basis for the continuing design of the DWPF even though minor revisions may be made in these balances in future revisions to the Technical Data Summary.

  14. Chemical and biological flocculation process to treat municipal sewage and analysis of biological function

    Institute of Scientific and Technical Information of China (English)

    XIA Si-qing; YANG Dian-hai; XU Bin; ZHAO Jian-fu

    2005-01-01

    The pilot-scale experimental apparatus and the procedure of the chemical and biological flocculation process to verify the feasibility in treating Shanghai municipal sewage were introduced in this paper. In addition, the biological function of the process was discussed. The results of optimal running showed that in the reaction tank, the concentration of mixed liquor suspended solid(MLSS) was2 g/L, hydraulic retention time(HRT) was 35 min, dosage of liquid polyaluminium chloride(PAC) was 60 mg/L, and the concentration of polyacrylamide(PAM) was 0.5 mg/L. The effluent average concentrations of CODcr, TP, SS and BOD5 were 50 mg/L, 0.62 mg/L, 18mg/L, and 17 mg/L, respectively. These were better than the designed demand. In addition, the existence of biological degradation in this system was proven by several methods. The removal efficiencies of the chemical and biological flocculation process were 20% higher than that of the chemical flocculation process above at the same coagulant dosage. The treatment process under different situations was evaluated on a pilot-scale experiment, and the results provided magnificent parameters and optimal condition for future operation of the plant.

  15. Cancer systems biology: signal processing for cancer research

    Institute of Scientific and Technical Information of China (English)

    Olli Yli-Harja; Antti Ylip(a)(a); Matti Nykter; Wei Zhang

    2011-01-01

    In this editorial we introduce the research paradigms of signal processing in the era of systems biology. Signal processing is a field of science traditionally focused on modeling electronic and communications systems, but recently it has turned to biological applications with astounding results. The essence of signal processing is to describe the natural world by mathematical models and then, based on these models, develop efficient computational tools for solving engineering problems. Here, we underline, with examples, the endless possibilities which arise when the battle-hardened tools of engineering are applied to solve the problems that have tormented cancer researchers. Based on this approach, a new field has emerged, called cancer systems biology. Despite its short history, cancer systems biology has already produced several success stories tackling previously impracticable problems. Perhaps most importantly, it has been accepted as an integral part of the major endeavors of cancer research, such as analyzing the genomic and epigenomic data produced by The Cancer Genome Atlas (TCGA) project. Finally, we show that signal processing and cancer research, two fields that are seemingly distant from each other, have merged into a field that is indeed more than the sum of its parts.

  16. Transport processes in biological systems: Tumoral cells and human brain

    Science.gov (United States)

    Lucia, Umberto

    2014-01-01

    The entropy generation approach has been developed for the analysis of complex systems, with particular regards to biological systems, in order to evaluate their stationary states. The entropy generation is related to the transport processes related to exergy flows. Moreover, cancer can be described as an open complex dynamic and self-organizing system. Consequently, it is used as an example useful to evaluate the different thermo-chemical quantities of the transport processes in normal and in tumoral cells systems.

  17. Introductory Biology Textbooks Under-Represent Scientific Process

    Directory of Open Access Journals (Sweden)

    Dara B. Duncan

    2011-08-01

    Full Text Available Attrition of undergraduates from Biology majors is a long-standing problem. Introductory courses that fail to engage students or spark their curiosity by emphasizing the open-ended and creative nature of biological investigation and discovery could contribute to student detachment from the field. Our hypothesis was that introductory biology books devote relatively few figures to illustration of the design and interpretation of experiments or field studies, thereby de-emphasizing the scientific process.To investigate this possibility, we examined figures in six Introductory Biology textbooks published in 2008. On average, multistep scientific investigations were presented in fewer than 5% of the hundreds of figures in each book. Devoting such a small percentage of figures to the processes by which discoveries are made discourages an emphasis on scientific thinking. We suggest that by increasing significantly the illustration of scientific investigations, textbooks could support undergraduates’ early interest in biology, stimulate the development of design and analytical skills, and inspire some students to participate in investigations of their own.

  18. A Friendly-Biological Reactor SIMulator (BioReSIM for studying biological processes in wastewater treatment processes

    Directory of Open Access Journals (Sweden)

    Raul Molina

    2014-12-01

    Full Text Available Biological processes for wastewater treatments are inherently dynamic systems because of the large variations in the influent wastewater flow rate, concentration composition and the adaptive behavior of the involved microorganisms. Moreover, the sludge retention time (SRT is a critical factor to understand the bioreactor performances when changes in the influent or in the operation conditions take place. Since SRT are usually in the range of 10-30 days, the performance of biological reactors needs a long time to be monitored in a regular laboratory demonstration, limiting the knowledge that can be obtained in the experimental lab practice. In order to overcome this lack, mathematical models and computer simulations are useful tools to describe biochemical processes and predict the overall performance of bioreactors under different working operation conditions and variations of the inlet wastewater composition. The mathematical solution of the model could be difficult as numerous biochemical processes can be considered. Additionally, biological reactors description (mass balance, etc. needs models represented by partial or/and ordinary differential equations associated to algebraic expressions, that require complex computational codes to obtain the numerical solutions. Different kind of software for mathematical modeling can be used, from large degree of freedom simulators capable of free models definition (as AQUASIM, to closed predefined model structure programs (as BIOWIN. The first ones usually require long learning curves, whereas the second ones could be excessively rigid for specific wastewater treatment systems. As alternative, we present Biological Reactor SIMulator (BioReSIM, a MATLAB code for the simulation of sequencing batch reactors (SBR and rotating biological contactors (RBC as biological systems of suspended and attached biomass for wastewater treatment, respectively. This BioReSIM allows the evaluation of simple and complex

  19. Laser Wire Scanner Basic Process and Perspectives for the CTF's and CLIC Machines

    CERN Document Server

    Lefèvre, T

    2002-01-01

    In a laser wire scanner, the basic idea is to replace the solid wire classically used in a standard wire scanner by a narrow laser beam. The basic process involved is the Thomson-Compton scattering process, where photons are scattered from the laser beam by the incoming electrons. By counting the number of scattered photons or degraded electrons as a function of laser position the bunch profile can be reconstructed. In this note the Compton scattering mechanism is first presented. In the framework of the CLIC project, a laser wire scanner (LWS) could be used as a non-interfering beam profile measurement both on the Drive Beam for a high current electron beam and on the Main Beam for very small electron beam sizes. A design for a LWS on the CTF2 and CTF3 machines is proposed and some considerations for the use of a LWS on the CLIC main beam are also mentioned.

  20. Biological Decolorization of C.I. Basic Green 4 Solution by Chlorella sp.:Effect of Operational Parameters

    Institute of Scientific and Technical Information of China (English)

    Khataee A. R.; Pourhassan M.; Ayazloo M.

    2009-01-01

    In recent years, the ability of microorganisms to decolorize textile wastewater has received great attention due to the environmental persistence and toxicity of these pollutants. In this paper biological decolorization of triphenylmethane dye, C.I. Basic Green 4 (BG 4), by Chlorella species was investigated. The effect of operational parameters (temperature, pH, initial dye concentration and algal concentration) on decolorization efficiency was examined. Results indicated that the desired initial pH was 9. The stability and efficiency of the algae in long-term repetitive operations were also examined. Michaelis-Menten kinetics was employed to describe the apparent correlation between the decolorization rate and dye concentration. The optimal kinetic parameters, Vmax (specific decolorization rate) and Km (maximum specific decolorization rate) were 4.6 mg dye g cell-1 h-1and 151.0 mg L-1, respectively. Fig 10, Tab 2, Ref24

  1. iBiology: communicating the process of science.

    Science.gov (United States)

    Goodwin, Sarah S

    2014-08-01

    The Internet hosts an abundance of science video resources aimed at communicating scientific knowledge, including webinars, massive open online courses, and TED talks. Although these videos are efficient at disseminating information for diverse types of users, they often do not demonstrate the process of doing science, the excitement of scientific discovery, or how new scientific knowledge is developed. iBiology (www.ibiology.org), a project that creates open-access science videos about biology research and science-related topics, seeks to fill this need by producing videos by science leaders that make their ideas, stories, and experiences available to anyone with an Internet connection. PMID:25080124

  2. Classical and spatial stochastic processes with applications to biology

    CERN Document Server

    Schinazi, Rinaldo B

    2014-01-01

    The revised and expanded edition of this textbook presents the concepts and applications of random processes with the same illuminating simplicity as its first edition, but with the notable addition of substantial modern material on biological modeling. While still treating many important problems in fields such as engineering and mathematical physics, the book also focuses on the highly relevant topics of cancerous mutations, influenza evolution, drug resistance, and immune response. The models used elegantly apply various classical stochastic models presented earlier in the text, and exercises are included throughout to reinforce essential concepts. The second edition of Classical and Spatial Stochastic Processes is suitable as a textbook for courses in stochastic processes at the advanced-undergraduate and graduate levels, or as a self-study resource for researchers and practitioners in mathematics, engineering, physics, and mathematical biology. Reviews of the first edition: An appetizing textbook for a f...

  3. Assessment of biological Hydrogen production processes: A review

    Science.gov (United States)

    Najafpour, G. D.; Shahavi, M. H.; Neshat, S. A.

    2016-06-01

    Energy crisis created a special attention on renewable energy sources. Among these sources; hydrogen through biological processes is well-known as the most suitable and renewable energy sources. In terms of process yield, hydrogen production from various sources was evaluated. A summary of microorganisms as potential hydrogen producers discussed along with advantages and disadvantages of several bioprocesses. The pathway of photo-synthetic and dark fermentative organisms was discussed. In fact, the active enzymes involved in performance of biological processes for hydrogen generation were identified and their special functionalities were discussed. The influential factors affecting on hydrogen production were known as enzymes assisting liberation specific enzymes such as nitrogenase, hydrogenase and uptake hydrogenase. These enzymes were quite effective in reduction of proton and form active molecular hydrogen. Several types of photosynthetic systems were evaluated with intension of maximum hydrogen productivities. In addition dark fermentative and light intensities on hydrogen productions were evaluated. The hydrogen productivities of efficient hydrogen producing strains were evaluated.

  4. Benchmarking Combined Biological Phosphorus and Nitrogen Removal Wastewater Treatment Processes

    DEFF Research Database (Denmark)

    Gernaey, Krist; Jørgensen, Sten Bay

    2004-01-01

    This paper describes the implementation of a simulation benchmark for studying the influence of control strategy implementations on combined nitrogen and phosphorus removal processes in a biological wastewater treatment plant. The presented simulation benchmark plant and its performance criteria...... conditions respectively, the definition of performance indexes that include the phosphorus removal processes, and the selection of a suitable operating point for the plant. Two control loops were implemented: one for dissolved oxygen control using the oxygen transfer coefficient K(L)a as manipulated variable...... are to a large extent based on the already existing nitrogen removal simulation benchmark. The paper illustrates and motivates the selection of the treatment plant lay-out, the selection of the biological process model, the development of realistic influent disturbance scenarios for dry, rain and storm weather...

  5. BASIC: A New Biopart Assembly Standard for Idempotent Cloning Provides Accurate, Single-Tier DNA Assembly for Synthetic Biology.

    Science.gov (United States)

    Storch, Marko; Casini, Arturo; Mackrow, Ben; Fleming, Toni; Trewhitt, Harry; Ellis, Tom; Baldwin, Geoff S

    2015-07-17

    The ability to quickly and reliably assemble DNA constructs is one of the key enabling technologies for synthetic biology. Here we define a new Biopart Assembly Standard for Idempotent Cloning (BASIC), which exploits the principle of orthogonal linker based DNA assembly to define a new physical standard for DNA parts. Further, we demonstrate a new robust method for assembly, based on type IIs restriction enzyme cleavage and ligation of oligonucleotides with single stranded overhangs that determine the assembly order. It allows for efficient, parallel assembly with great accuracy: 4 part assemblies achieved 93% accuracy with single antibiotic selection and 99.7% accuracy with double antibiotic selection, while 7 part assemblies achieved 90% accuracy with double antibiotic selection. The linkers themselves may also be used as composable parts for RBS tuning or the creation of fusion proteins. The standard has one forbidden restriction site and provides for an idempotent, single tier organization, allowing all parts and composite constructs to be maintained in the same format. This makes the BASIC standard conceptually simple at both the design and experimental levels. PMID:25746445

  6. Brain Basics

    Medline Plus

    Full Text Available ... Neurons & Neural Circuits Neurons are the basic working unit of the brain and nervous system. These cells ... A nerve cell that is the basic, working unit of the brain and nervous system, which processes ...

  7. Biological Signal Processing with a Genetic Toggle Switch

    Science.gov (United States)

    Hillenbrand, Patrick; Fritz, Georg; Gerland, Ulrich

    2013-01-01

    Complex gene regulation requires responses that depend not only on the current levels of input signals but also on signals received in the past. In digital electronics, logic circuits with this property are referred to as sequential logic, in contrast to the simpler combinatorial logic without such internal memory. In molecular biology, memory is implemented in various forms such as biochemical modification of proteins or multistable gene circuits, but the design of the regulatory interface, which processes the input signals and the memory content, is often not well understood. Here, we explore design constraints for such regulatory interfaces using coarse-grained nonlinear models and stochastic simulations of detailed biochemical reaction networks. We test different designs for biological analogs of the most versatile memory element in digital electronics, the JK-latch. Our analysis shows that simple protein-protein interactions and protein-DNA binding are sufficient, in principle, to implement genetic circuits with the capabilities of a JK-latch. However, it also exposes fundamental limitations to its reliability, due to the fact that biological signal processing is asynchronous, in contrast to most digital electronics systems that feature a central clock to orchestrate the timing of all operations. We describe a seemingly natural way to improve the reliability by invoking the master-slave concept from digital electronics design. This concept could be useful to interpret the design of natural regulatory circuits, and for the design of synthetic biological systems. PMID:23874595

  8. Targeting Specific HATs for Neurodegenerative Disease Treatment: Translating Basic Biology to Therapeutic Possibilities

    Directory of Open Access Journals (Sweden)

    Sheila K. Pirooznia

    2013-03-01

    Full Text Available Dynamic epigenetic regulation of neurons is emerging as a fundamental mechanism by which neurons adapt their transcriptional responses to specific developmental and environmental cues. While defects within the neural epigenome have traditionally been studied in the context of early developmental and heritable cognitive disorders, recent studies point to aberrant histone acetylation status as a key mechanism underlying acquired inappropriate alterations of genome structure and function in post-mitotic neurons during the aging process. Indeed, it is becoming increasingly evident that chromatin acetylation status can be impaired during the lifetime of neurons through mechanisms related to loss of function of histone acetyltransferase (HATs activity. Several HATs have been shown to participate in vital neuronal functions such as regulation of neuronal plasticity and memory formation. As such, dysregulation of such HATs has been implicated in the pathogenesis associated with age-associated neurodegenerative diseases and cognitive decline. In order to counteract the loss of HAT function in neurodegenerative diseases, the current therapeutic strategies involve the use of small molecules called histone deacetylase (HDAC inhibitors that antagonize HDAC activity and thus enhance acetylation levels. Although this strategy has displayed promising therapeutic effects, currently used HDAC inhibitors lack target specificity, raising concerns about their applicability. With rapidly evolving literature on HATs and their respective functions in mediating neuronal survival and higher order brain function such as learning and memory, modulating the function of specific HATs holds new promises as a therapeutic tool in neurodegenerative diseases. In this review, we focus on the recent progress in research regarding epigenetic histone acetylation mechanisms underlying neuronal activity and cognitive function. We discuss the current understanding of specific HDACs and

  9. Basic uranium-235 enrichment by the Asahi Chemical Enrichment Process (ACEP)

    International Nuclear Information System (INIS)

    The development of Asahi Chemical Enrichment Process (ACEP) led to the establishment of basic process technology permitting attainment of 3% enrichment within several months of operation by the mid-1980s, through advances which brought increased electron-exchange and adsorption-desorption reaction rates, effective uranium adsorption band formation and maintenance, and equilibrium plate height reductions based on the elucidation of mobile-phase dispersion. The theoretical and experimental development of redox agent self-regeneration led to a new 'Super Process' characterized by greater simplicity and efficiency than previously thought possible. A semi-commercial plant with enrichment columns of 1 m in diameter and 3 m in height, constructed at Hyuga City in Miyazaki Prefecture, demonstrated 3% uranium enrichment in April 1988. Through the improvement of enrichment efficiency, overall enrichment costs have been greatly lowered. The advantage of the chemical enrichment process, and its low cost of enrichment, have now been clearly demonstrated. (author)

  10. Processing biological literature with customizable Web services supporting interoperable formats

    OpenAIRE

    Rak, Rafal; Batista-Navarro, Riza Theresa; Carter, Jacob; Rowley, Andrew; Ananiadou, Sophia

    2014-01-01

    Web services have become a popular means of interconnecting solutions for processing a body of scientific literature. This has fuelled research on high-level data exchange formats suitable for a given domain and ensuring the interoperability of Web services. In this article, we focus on the biological domain and consider four interoperability formats, BioC, BioNLP, XMI and RDF, that represent domain-specific and generic representations and include well-established as well as emerging specific...

  11. Processed Vietnamese ginseng: Preliminary results in chemistry and biological activity

    OpenAIRE

    Le, Thi Hong Van; Lee, Seo Young; Kim, Tae Ryong; Kim, Jae Young; Kwon, Sung Won; NGUYEN, NGOC KHOI; Park, Jeong Hill; Nguyen, Minh Duc

    2013-01-01

    Background This study was carried out to investigate the effect of the steaming process on chemical constituents, free radical scavenging activity, and antiproliferative effect of Vietnamese ginseng. Methods Samples of powdered Vietnamese ginseng were steamed at 120°C for various times and their extracts were subjected to chemical and biological studies. Results Upon steaming, contents of polar ginsenosides, such as Rb1, Rc, Rd, Re, and Rg1, were rapidly decreased, whereas less polar ginsenos...

  12. Optimizing processes for biological nitrogen removal in Nakivubo wetland, Uganda

    OpenAIRE

    Kyambadde, Joseph

    2005-01-01

    The ability of Nakivubo wetland (which has performed tertiary water treatment for Kampala city for the past 40 years) to respond to pollution and to protect the water quality of Inner Murchison Bay of Lake Victoria was investigated. The aim of this study was to assess the capacity of Nakivubo wetland to remove nitrogen from the wastewater after its recent encroachment and modification, in order to optimize biological nitrogen removal processes using constructed wetland technology. Field studi...

  13. CHARACTERISATION OF BIOLOGICALLY PRETREATED RAW MATERIALS FOR BIOPULPING PROCESS

    OpenAIRE

    Susy Albert; Amee Padhiar

    2012-01-01

    Biopulping, the treatment of wood chips by white rot fungi and subsequent chip refining is envisioned as a method for saving energy and making a stronger paper product. The present study aims to find suitability of two fungal isolates Phellinus pectinatus and Daedaleopsis confragosa for the process of biopulping and the characteristion of the biologically pretreated raw materials for biopulping. Two combinations of raw samples, Bamboo: wood shavings and Bamboo: wood shavings: Sorghum halepens...

  14. Diverse Biological Functions of Extracellular Collagen Processing Enzymes

    OpenAIRE

    Trackman, Philip C.

    2005-01-01

    Collagens are abundant proteins in higher organisms, and are formed by a complex biosynthetic pathway involving intracellular and extracellular post-translational modifications. Starting from simple soluble precursors, this interesting pathway produces insoluble functional fibrillar and non-fibrillar elements of the extracellular matrix. The present review highlights recent progress and new insights into biological regulation of extracellular procollagen processing, and some novel functions o...

  15. Environment. Biological processing of wastes; Environnement. Traitement biologique des dechets

    Energy Technology Data Exchange (ETDEWEB)

    Gourdon, R. [Institut National des Sciences Appliquees, INSA, Lab. d' Analyse Environnementale des Procedes et des Systemes Industriels, 69 - Villeurbanne (France)

    2001-01-01

    The main principle of the biological processing is the utilization of microbial activities by a control stimulation in order to decrease the wastes harmful effects, or by an energetic valorization. This paper deals with the solid wastes or the sludges. After a short presentation of the concerned wastes, their metabolism and their consequences, the author details two treatments: the composting (aerobic) and the methanization (anaerobic). The last part is devoted to the alcoholic fermentation and the industrial wastes (non agricultural) processing. (A.L.B.)

  16. ELECTROCHEMICAL STABILITY OF STRONG BASIC ANION EXCHANGE MEMBRANES IN CONDITIONS OF HIGH INTENSIVE ELECTRODIALYSIS PROCESS

    Directory of Open Access Journals (Sweden)

    Zabolotskiy V. I.

    2014-12-01

    Full Text Available The stability of strongly basic anion-exchange membranes MA-41-2P (JSC "Schekino-Nitrogen", Russia and AMX (Tokuyama Soda, Japan under intensive current regimes was investigated in the current study. The process of water molecules dissociation at current densities above the limiting one in 0.01 M sodium chloride solution was studied in detail. The length of the electroconvective instability at the membrane / solution interface at currents exceeding the limiting current was measured by laser interferometry

  17. Energy landscape exploration of the folding processes of biological molecules

    Science.gov (United States)

    Engel, Megan Clare

    For decades, scientists from every discipline have struggled to understand the mechanism of biological self-assembly, which allows proteins and nucleic acids to fold reliably into functional three-dimensional structures. Such an understanding may hold the key to eliminating diseases such as Alzheimer's and Parkinson's and to effective protein engineering. The current best framework for describing biological folding processes is that of statistical mechanical energy landscape theory, and one of the most promising experimental techniques for exploring molecular energy landscapes is single molecule force spectroscopy (SMFS), in which molecules are mechanically denatured. Theoretical advances have enabled the extraction of complete energy landscape profiles from SMFS data. Here, SMFS experiments performed using laser optical tweezers are analyzed to yield the first ever full landscape profile for an RNA pseudoknot. Further, a promising novel landscape reconstruction technique is validated for the first time using experimental data from a DNA hairpin.

  18. Radiation processing of biological tissues for nuclear disaster management

    International Nuclear Information System (INIS)

    A number of surgical procedures require tissue substitutes to repair or replace damaged or diseased tissues. Biological tissues from human donor like bone, skin, amniotic membrane and other soft tissues can be used for repair or reconstruction of the injured part of the body. Tissues from human donor can be processed and banked for orthopaedic, spinal, trauma and other surgical procedures. Allograft tissues provide an excellent alternative to autografts. The use of allograft tissue avoids the donor site morbidity and reduces the operating time, expense and trauma associated with the acquisition of autografts. Further, allografts have the added advantage of being available in large quantities. This has led to a global increase in allogeneic transplantation and development of tissue banking. However, the risk of infectious disease transmission via tissue allografts is a major concern. Therefore, tissue allografts should be sterilized to make them safe for clinical use. Radiation processing has well appreciated technological advantages and is the most suitable method for sterilization of biological tissues. Radiation processed biological tissues can be provided by the tissue banks for the management of injuries due to a nuclear disaster. A nuclear detonation will result in a large number of casualties due to the heat, blast and radiation effects of the weapon. Skin dressings or skin substitutes like allograft skin, xenograft skin and amniotic membrane can be used for the treatment of thermal burns and radiation induced skin injuries. Bone grafts can be employed for repairing fracture defects, filling in destroyed regions of bone, management of open fractures and joint injuries. Radiation processed tissues have the potential to repair or reconstruct damaged tissues and can be of great assistance in the treatment of injuries due to the nuclear weapon. (author)

  19. [Hadamard Transform NIR Spectrometer for the Biological Processes].

    Science.gov (United States)

    Liu, Peng; Li, Kai; Zeng, Li-bo; Wu, Qiong-shui

    2015-09-01

    Monitoring the consumption of nutrients of biological process helps control the growth environment of the microbes. It ensures the microbes are always in the best growing conditions, so as to maximize the yield of the target product. To monitor the content of glycerol, methanol and glucose in yeast culture medium, a new NIR spectrometer was developed which is based on Hadamard Transform (HT)technique. It uses the Near IR probe, which was designed all by ourselves, to collect the spectral signals, and uses the Digital Micro-mirror Devices(DMD) to complete the coding and modulation of Hadamard template. With self-developed software, aiming at spectral acquisition and spectral processing, the spectrometer has realized the real-time monitoring. The designs of optical path, Near IR probe, hardware circuit and software modules are given. Through lots of experiments, it turns out that the value of stray light is 0.875% and the volatility is ±4.28% in this spectrometer. The spectrometer shows high precision in a series of tests which means it totally meets the requirements of monitoring the biological processes. PMID:26669185

  20. Process for the biological purification of waste water

    DEFF Research Database (Denmark)

    1992-01-01

    Process for the biological purification of waste water by the activated sludge method, the waste water being mixed with recirculated sludge and being subjected to an anaerobic treatment, before the waste water thus treated is alternately subjected to anoxic and aerobic treatments and the waste...... water thus treated is led into a clarification zone for settling sludge, which sludge is recirculated in order to be mixed with the crude waste water. As a result, a simultaneous reduction of the content both of nitrogen and phosphorus of the waste water is achieved....

  1. CHARACTERISATION OF BIOLOGICALLY PRETREATED RAW MATERIALS FOR BIOPULPING PROCESS

    Directory of Open Access Journals (Sweden)

    Susy Albert

    2012-12-01

    Full Text Available Biopulping, the treatment of wood chips by white rot fungi and subsequent chip refining is envisioned as a method for saving energy and making a stronger paper product. The present study aims to find suitability of two fungal isolates Phellinus pectinatus and Daedaleopsis confragosa for the process of biopulping and the characteristion of the biologically pretreated raw materials for biopulping. Two combinations of raw samples, Bamboo: wood shavings and Bamboo: wood shavings: Sorghum halepense culm were prepared and subjected to four different pretreatment. Daedaleopsis confragosa was found to be effective in biopulping with a supplement of Potato dextrose broth medium to the raw material.

  2. EEG delta oscillations as a correlate of basic homeostatic and motivational processes.

    Science.gov (United States)

    Knyazev, Gennady G

    2012-01-01

    Functional significance of delta oscillations is not fully understood. One way to approach this question would be from an evolutionary perspective. Delta oscillations dominate the EEG of waking reptiles. In humans, they are prominent only in early developmental stages and during slow-wave sleep. Increase of delta power has been documented in a wide array of developmental disorders and pathological conditions. Considerable evidence on the association between delta waves and autonomic and metabolic processes hints that they may be involved in integration of cerebral activity with homeostatic processes. Much evidence suggests the involvement of delta oscillations in motivation. They increase during hunger, sexual arousal, and in substance users. They also increase during panic attacks and sustained pain. In cognitive domain, they are implicated in attention, salience detection, and subliminal perception. This evidence shows that delta oscillations are associated with evolutionary old basic processes, which in waking adults are overshadowed by more advanced processes associated with higher frequency oscillations. The former processes rise in activity, however, when the latter are dysfunctional. PMID:22020231

  3. Molecular and physiological basic processes in the context of radiation protection

    International Nuclear Information System (INIS)

    The aim of this paper is an attempt to answer the question why accumulated knowledge on molecular basis of biological effects of ionizing radiation have not yet resulted in in sufficiently successful chemical radiation protection. In the past decade experimental results which demonstrated a direct regulatory role of some radicals in the main physiological processes such as vascular tone successfully emphasize the significance of old experimental results (the best protection can be achieved through physiological manipulations) connecting them to new data on free radical evolvement and the application of various free radical scavengers in radiation protection, which represents the most appropriate approach to the problem. (author)

  4. Adoption: biological and social processes linked to adaptation.

    Science.gov (United States)

    Grotevant, Harold D; McDermott, Jennifer M

    2014-01-01

    Children join adoptive families through domestic adoption from the public child welfare system, infant adoption through private agencies, and international adoption. Each pathway presents distinctive developmental opportunities and challenges. Adopted children are at higher risk than the general population for problems with adaptation, especially externalizing, internalizing, and attention problems. This review moves beyond the field's emphasis on adoptee-nonadoptee differences to highlight biological and social processes that affect adaptation of adoptees across time. The experience of stress, whether prenatal, postnatal/preadoption, or during the adoption transition, can have significant impacts on the developing neuroendocrine system. These effects can contribute to problems with physical growth, brain development, and sleep, activating cascading effects on social, emotional, and cognitive development. Family processes involving contact between adoptive and birth family members, co-parenting in gay and lesbian adoptive families, and racial socialization in transracially adoptive families affect social development of adopted children into adulthood. PMID:24016275

  5. Carbon ceramic electrodes obtained by basic catalysis of sol–gel process

    International Nuclear Information System (INIS)

    Highlights: • The CCE prepared by basic catalysis of sol–gel process are more porous. • The synthesized electrodes showed higher sensitivity. • The preparation conditions of CCE were obtained with factorial design. - Abstract: The preparation and characterization of carbon ceramic electrodes (CCEs) produced by the sol–gel method was reported. Different parameters for the manufacture of CCE were studied. Some factors such as the preparation method, type of precursor and catalyst, directly influence the conductive properties, mechanical and morphological characteristics of CCEs, and these are reflected in their electrochemical response. Such factors were evaluated using a 24 (two factors and four levels) factorial design analyzing the anodic peak currents (Ipa) and the variation of peak potential (ΔEp) responses of the respective cyclic voltammograms in presence of potassium ferrocyanide. Analyzing the set of results obtained from cyclic voltammetry, a higher reversibility was observed for the electrodes prepared by basic catalysis using methyltrimethoxysilicate, MTMS, as Si precursor. It is suggested that the obtained material presents a porous morphological structure, providing higher reversibility and better definition of voltammetric peaks. These electrodes were characterized by scanning electron microscopy (SEM), Fourier transform infrared spectroscopy (FTIR) and X-ray diffraction (XDR)

  6. Using Fossil Shark Teeth to Illustrate Evolution and Introduce Basic Geologic Concepts in a High School Biology Classroom

    Science.gov (United States)

    Agnew, J. G.; Nunn, J. A.

    2007-12-01

    Shell Foundation sponsors a program at Louisiana State University called Shell Undergraduate Recruitment and Geoscience Education (SURGE). The purpose of SURGE is to help local high school science teachers incorporate geology into their classrooms by providing resources and training. As part of this program, a workshop for high school biology teachers was held at Louisiana State University in Baton Rouge on June 3-5, 2007. We had the teachers do a series of activities on fossil shark teeth to illustrate evolution and introduce basic earth science concepts such as geologic time, superposition, and faunal succession and provided the teachers with lesson plans and materials. As an example, one of our exercises explores the evolution of the megatoothed shark lineage leading to Carcharocles megalodon, the largest predatory shark in history with teeth up to 17 cm long. Megatoothed shark teeth make excellent evolutionary subjects because they have a good fossil record and show continuous transitions in morphology from the Eocene to Pliocene. Our activity follows the learning cycle model. We take advantage of the curiosity of sharks shared by most people, and allow students to explore the variations among different shark teeth and explain the causes of those variations. The objectives of this exercise are to have the students: 1) sort fossil shark teeth into biologically reasonable species; 2) form hypotheses about evolutionary relationships among fossil shark teeth; and 3) describe and interpret evolutionary trends in the fossil Megatoothed lineage. To do the activity, students are divided into groups of 2-3 and given a shuffled set of 72 shark tooth cards with different images of megatoothed shark teeth. They are instructed to group the shark tooth cards into separate species of sharks. After sorting the cards, students are asked to consider the evolutionary relationships among their species and arrange their species chronologically according to the species first

  7. Back Pain in Children and Adolescents (Beyond the Basics)

    Science.gov (United States)

    ... Preclinical)]; Sobi [IL-1 biology (Anakinra)]; Alkermes [Basic biology]. Robert Sundel, MD ... group. When found, these are addressed by vetting through a multi-level review process, and through requirements for references to ...

  8. KEMAMPUAN SUBJECT SPECIFIC PEDAGOGY CALON GURU BIOLOGI PESERTA PROGRAM PENDIDIKAN PROFESIONAL GURU (PPG YANG BERLATAR BELAKANG BASIC SAINS PRA DAN POST WORKSHOP

    Directory of Open Access Journals (Sweden)

    Yenny Anwar

    2012-10-01

    Full Text Available Penelitian ini bertujuan untuk menggambarkan/mendeskripsikan kemampuan Subjek Spesifik Pedagogi mahasiswa calon guru biologi yang mengikuti program Pendidikan Profesional Guru (PPG angkatan 2012-2013 melalui pendekatan konsekutif.  Hasil sementara menunjukkan  bahwa Kemampuan Subject Specific Pedagogy mahasiswa calon guru biologi yang berlatar belakang Biologi murni program Basic Science masih minim, dapat dilihat dari hasil CoRes dan PaP-eRs buatan mereka sebelum mengikuti workshop. Setelah workshop semester I diperoleh hasil yang menunjukkan peningkatan yang cukup baik.   This study aimed to describe / describes the ability of prospective students Subject Specific Pedagogy biology teachers who follow the Professional Teacher Education Program (PTEP 2012-2013 armed consecutive approach. Preliminary results indicate that the ability of prospective students Subject Specific Pedagogy biology teacher who belongs to the pure Biology Basic Science program is minimal, it can be seen from the cores and pap-ers made ​​them before the workshop. After the workshop the first half of the obtained results that showed a pretty good improvement.

  9. Biological Processes Discovered by High-Throughput Sequencing.

    Science.gov (United States)

    Reon, Brian J; Dutta, Anindya

    2016-04-01

    Advances in DNA and RNA sequencing technologies have completely transformed the field of genomics. High-throughput sequencing (HTS) is now a widely used and accessible technology that allows scientists to sequence an entire transcriptome or genome in a timely and cost-effective manner. Application of HTS techniques has led to many key discoveries, including the identification of long noncoding RNAs, microDNAs, a family of small extrachromosomal circular DNA species, and tRNA-derived fragments, which are a group of small non-miRNAs that are derived from tRNAs. Furthermore, public sequencing repositories provide unique opportunities for laboratories to parse large sequencing databases to identify proteins and noncoding RNAs at a scale that was not possible a decade ago. Herein, we review how HTS has led to the discovery of novel nucleic acid species and uncovered new biological processes during the course. PMID:26828742

  10. Monitoring Biological Modes in a Bioreactor Process by Computer Simulation

    Directory of Open Access Journals (Sweden)

    Samia Semcheddine

    2015-12-01

    Full Text Available This paper deals with the general framework of fermentation system modeling and monitoring, focusing on the fermentation of Escherichia coli. Our main objective is to develop an algorithm for the online detection of acetate production during the culture of recombinant proteins. The analysis the fermentation process shows that it behaves like a hybrid dynamic system with commutation (since it can be represented by 5 nonlinear models. We present a strategy of fault detection based on residual generation for detecting the different actual biological modes. The residual generation is based on nonlinear analytical redundancy relations. The simulation results show that the several modes that are occulted during the bacteria cultivation can be detected by residuals using a nonlinear dynamic model and a reduced instrumentation.

  11. [Biological Process Oriented Online Fourier Transform Infrared Spectrometer].

    Science.gov (United States)

    Xie, Fei; Wu, Qiong-shui; Zeng, Li-bo

    2015-08-01

    An online Fourier Transform Infrared Spectrometer and an ATR (Attenuated Total Reflection) probe, specifically at the application of real time measurement of the reaction substrate concentration in biological processes, were designed. (1) The spectrometer combined the theories of double cube-corner reflectors and flat mirror, which created a kind of high performance interferometer system. The light path folding way was utilized to makes the interferometer compact structure. Adopting double cube-corner reflectors, greatly reduces the influence of factors in the process of moving mirror movement such as rotation, tilt, etc. The parallelogram oscillation flexible support device was utilized to support the moving mirror moves. It cancelled the friction and vibration during mirror moving, and ensures the smooth operation. The ZnSe splitter significantly improved the hardware reliability in high moisture environment. The method of 60° entrance to light splitter improves the luminous flux. (2) An ATR in situ measuring probe with simple structure, large-flux, economical and practical character was designed in this article. The transmission of incident light and the light output utilized the infrared pipe with large diameter and innerplanted-high plating membrane, which conducted for the infrared transmission media of ATR probe. It greatly reduced the energy loss of infrared light after multiple reflection on the inner wall of the light pipe. Therefore, the ATR probe obtained high flux, improved the signal strength, which make the signal detected easily. Finally, the high sensitivity of MCT (Mercury Cadmium Telluride) detector was utilized to realize infrared interference signal collection, and improved the data quality of detection. The test results showed that the system yields the advantages of perfect moisture-proof performance, luminous flux, online measurement, etc. The designed online Fourier infrared spectrometer can real-time measured common reactant substrates

  12. Neural processing of basic tastes in healthy young and older adults - an fMRI study.

    Science.gov (United States)

    Hoogeveen, Heleen R; Dalenberg, Jelle R; Renken, Remco J; ter Horst, Gert J; Lorist, Monicque M

    2015-10-01

    Ageing affects taste perception as shown in psychophysical studies, however, underlying structural and functional mechanisms of these changes are still largely unknown. To investigate the neurobiology of age-related differences associated with processing of basic tastes, we measured brain activation (i.e. fMRI-BOLD activity) during tasting of four increasing concentrations of sweet, sour, salty, and bitter tastes in young (average 23 years of age) and older (average 65 years of age) adults. The current study highlighted age-related differences in taste perception at the different higher order brain areas of the taste pathway. We found that the taste information delivered to the brain in young and older adults was not different, as illustrated by the absence of age effects in NTS and VPM activity. Our results indicate that multisensory integration changes with age; older adults showed less brain activation to integrate both taste and somatosensory information. Furthermore, older adults directed less attention to the taste stimulus; therefore attention had to be reallocated by the older individuals in order to perceive the tastes. In addition, we considered that the observed age-related differences in brain activation between taste concentrations in the amygdala reflect its involvement in processing both concentration and pleasantness of taste. Finally, we state the importance of homeostatic mechanisms in understanding the taste quality specificity in age related differences in taste perception. PMID:26072251

  13. Ontology of physics for biology: representing physical dependencies as a basis for biological processes

    Science.gov (United States)

    2013-01-01

    Background In prior work, we presented the Ontology of Physics for Biology (OPB) as a computational ontology for use in the annotation and representations of biophysical knowledge encoded in repositories of physics-based biosimulation models. We introduced OPB:Physical entity and OPB:Physical property classes that extend available spatiotemporal representations of physical entities and processes to explicitly represent the thermodynamics and dynamics of physiological processes. Our utilitarian, long-term aim is to develop computational tools for creating and querying formalized physiological knowledge for use by multiscale “physiome” projects such as the EU’s Virtual Physiological Human (VPH) and NIH’s Virtual Physiological Rat (VPR). Results Here we describe the OPB:Physical dependency taxonomy of classes that represent of the laws of classical physics that are the “rules” by which physical properties of physical entities change during occurrences of physical processes. For example, the fluid analog of Ohm’s law (as for electric currents) is used to describe how a blood flow rate depends on a blood pressure gradient. Hooke’s law (as in elastic deformations of springs) is used to describe how an increase in vascular volume increases blood pressure. We classify such dependencies according to the flow, transformation, and storage of thermodynamic energy that occurs during processes governed by the dependencies. Conclusions We have developed the OPB and annotation methods to represent the meaning—the biophysical semantics—of the mathematical statements of physiological analysis and the biophysical content of models and datasets. Here we describe and discuss our approach to an ontological representation of physical laws (as dependencies) and properties as encoded for the mathematical analysis of biophysical processes. PMID:24295137

  14. Processing biological literature with customizable Web services supporting interoperable formats.

    Science.gov (United States)

    Rak, Rafal; Batista-Navarro, Riza Theresa; Carter, Jacob; Rowley, Andrew; Ananiadou, Sophia

    2014-01-01

    Web services have become a popular means of interconnecting solutions for processing a body of scientific literature. This has fuelled research on high-level data exchange formats suitable for a given domain and ensuring the interoperability of Web services. In this article, we focus on the biological domain and consider four interoperability formats, BioC, BioNLP, XMI and RDF, that represent domain-specific and generic representations and include well-established as well as emerging specifications. We use the formats in the context of customizable Web services created in our Web-based, text-mining workbench Argo that features an ever-growing library of elementary analytics and capabilities to build and deploy Web services straight from a convenient graphical user interface. We demonstrate a 2-fold customization of Web services: by building task-specific processing pipelines from a repository of available analytics, and by configuring services to accept and produce a combination of input and output data interchange formats. We provide qualitative evaluation of the formats as well as quantitative evaluation of automatic analytics. The latter was carried out as part of our participation in the fourth edition of the BioCreative challenge. Our analytics built into Web services for recognizing biochemical concepts in BioC collections achieved the highest combined scores out of 10 participating teams. Database URL: http://argo.nactem.ac.uk. PMID:25006225

  15. The method validation step of biological dosimetry accreditation process

    International Nuclear Information System (INIS)

    One of the missions of the Laboratory of Biological Dosimetry (L.D.B.) of the Institute for Radiation and Nuclear Safety (I.R.S.N.) is to assess the radiological dose after an accidental overexposure suspicion to ionising radiation, by using radio-induced changes of some biological parameters. The 'gold standard' is the yield of dicentrics observed in patients lymphocytes, and this yield is converted in dose using dose effect relationships. This method is complementary to clinical and physical dosimetry, for medical team in charge of the patients. To obtain a formal recognition of its operational activity, the laboratory decided three years ago, to require an accreditation, by following the recommendations of both 17025 General Requirements for the Competence of Testing and Calibration Laboratories and 19238 Performance criteria for service laboratories performing biological dosimetry by cyto-genetics. Diagnostics, risks analysis were realized to control the whole analysis process leading to documents writing. Purchases, personnel department, vocational training were also included in the quality system. Audits were very helpful to improve the quality system. One specificity of this technique is that it is not normalized therefore apart from quality management aspects, several technical points needed some validations. An inventory of potentially influent factors was carried out. To estimate their real effect on the yield of dicentrics, a Placket-Burman experimental design was conducted. The effect of seven parameters was tested: the BUdr (bromodeoxyuridine), PHA (phytohemagglutinin) and colcemid concentration, the culture duration, the incubator temperature, the blood volume and the medium volume. The chosen values were calculated according to the uncertainties on the way they were measured i.e. pipettes, thermometers, test tubes. None of the factors has a significant impact on the yield of dicentrics. Therefore the uncertainty linked to their use was considered as

  16. Pyrroloquinoline-quinone and its versatile roles in biological processes

    Indian Academy of Sciences (India)

    H S Misra; Y S Rajpurohit; N P Khairnar

    2012-06-01

    Pyrroloquinoline-quinine (PQQ) was initially characterized as a redox cofactor for membrane-bound dehydrogenases in the bacterial system. Subsequently, PQQ was shown to be an antioxidant protecting the living cells from oxidative damage in vivo and the biomolecules from artificially produced reaction oxygen species in vitro. The presence of PQQ has been documented from different biological samples. It functions as a nutrient and vitamin for supporting the growth and protection of living cells under stress. Recently, the role of PQQ has also been shown as a bio-control agent for plant fungal pathogens, an inducer for proteins kinases involved in cellular differentiation of mammalian cells and as a redox sensor leading to development of biosensor. Recent reviews published on PQQ and enzymes requiring this cofactor have brought forth the case specific roles of PQQ. This review covers the comprehensive information on various aspects of PQQ known till date. These include the roles of PQQ in the regulation of cellular growth and differentiation in mammalian system, as a nutrient and vitamin in stress tolerance, in crop productivity through increasing the availability of insoluble phosphate and as a bio-control agent, and as a redox agent leading to the biosensor development. Most recent findings correlating the exceptionally high redox recycling ability of PQQ to its potential as anti-neurodegenerative, anticancer and pharmacological agents, and as a signalling molecule have been distinctly brought out. This review discusses different findings suggesting the versatility in PQQ functions and provides the most plausible intellectual basis to the ubiquitous roles of this compound in a large number of biological processes, as a nutrient and a perspective vitamin.

  17. Pyrroloquinoline-quinone and its versatile roles in biological processes.

    Science.gov (United States)

    Misra, H S; Rajpurohit, Y S; Khairnar, N P

    2012-06-01

    Pyrroloquinoline-quinine (PQQ) was initially characterized as a redox cofactor for membrane-bound dehydrogenases in the bacterial system. Subsequently, PQQ was shown to be an antioxidant protecting the living cells from oxidative damage in vivo and the biomolecules from artificially produced reaction oxygen species in vitro. The presence of PQQ has been documented from different biological samples. It functions as a nutrient and vitamin for supporting the growth and protection of living cells under stress. Recently, the role of PQQ has also been shown as a bio-control agent for plant fungal pathogens, an inducer for proteins kinases involved in cellular differentiation of mammalian cells and as a redox sensor leading to development of biosensor. Recent reviews published on PQQ and enzymes requiring this cofactor have brought forth the case specific roles of PQQ. This review covers the comprehensive information on various aspects of PQQ known till date. These include the roles of PQQ in the regulation of cellular growth and differentiation in mammalian system, as a nutrient and vitamin in stress tolerance, in crop productivity through increasing the availability of insoluble phosphate and as a bio-control agent, and as a redox agent leading to the biosensor development. Most recent findings correlating the exceptionally high redox recycling ability of PQQ to its potential as anti-neurodegenerative, anticancer and pharmacological agents, and as a signalling molecule have been distinctly brought out. This review discusses different findings suggesting the versatility in PQQ functions and provides the most plausible intellectual basis to the ubiquitous roles of this compound in a large number of biological processes, as a nutrient and a perspective vitamin. PMID:22581337

  18. Management of biological processes in alley farming: Need for more research

    International Nuclear Information System (INIS)

    Alley farming involves the integration of trees, managed as hedgerows, within cropping systems. Research has shown that the system is highly stable and sustainable. The trees act within the system both as a nutrient pump and nutrient source, ensuring the constant injection of nutrients and their efficient cycling within the system. Nitrogen-fixing trees have a great capacity for maintaining soil fertility and sustainability in such systems, because of biological nitrogen fixation and its contribution to soil fertility. Some tree species such as Leucaena leucocephala, Gliricidia sepium can fix as much as 200-300 kg N/ha/year while others such as Faidherbia albida may fix only one tenth. Senna siamea and S. spectabilis do not fix N2. Nitrogen input from prunings of nitrogen fixing trees to alley farming systems is high but its use efficiency by an associated crop is low (10-30%). It may be that not enough is known of the basics of the biological processes to improve N use efficiency in alley cropping. This paper calls for increased research into such processes using precise and appropriate methodologies such as isotope aided techniques. (author). 33 refs, 2 tabs

  19. Selective reading slowness in a traumatic patient with impairment in basic visual processes.

    Science.gov (United States)

    Di Pace, E; Guariglia, C; Judica, A; Spinelli, D; Zoccolotti, P

    1995-12-01

    Following a closed-head injury, G.M., a 17-year-old male, showed a reading disturbance in the absence of other cognitive deficits. G.M.'s reading was exceedingly slow, although virtually error free. Analysis of his disorder indicated an inability to read words presented tachistoscopically to the left (spared) visual field. Therefore the reading deficit cannot be interpreted as simply due to the visual field reduction (hemianopic alexia). Reading speed was clearly affected by word length, a finding typical of letter-by-letter reading. Both behavioral and psychophysical testing indicated a selective reduction of visual discrimination and detection (particularly in the range of high spatial frequency information) in portions of the left hemifield which appeared spared upon perimetric examination. Overall, it is suggested that the reading deficit, phenomenologically similar to that of other letter-by-letter readers, can be interpreted as due to a combination of basic visual perturbations: visual field cut with macular splitting and deficit of processing of high spatial frequency information. PMID:8847394

  20. Biological sulfuric acid transformation: Reactor design and process optimization.

    Science.gov (United States)

    Stucki, G; Hanselmann, K W; Hürzeler, R A

    1993-02-01

    As an alternative to the current disposal technologies for waste sulfuric acid, a new combination of recycling processes was developed. The strong acid (H(2)SO(4)) is biologically converted with the weak acid (CH(3)COOH) into two volatile weak acids (H(2)S, H(2)CO(3)) by sulfate-reducing bacteria. The transformation is possible without prior neutralization of the sulfuric acid. The microbially mediated transformation can be followed by physiochemical processes for the further conversion of the H(2)S.The reduction of sulfate to H(2)S is carried out under carbon-limited conditions at pH 7.5 to 8.5. A fixed-bed biofilm column reactor is used in conjunction with a separate gas-stripping column which was installed in the recycle stream. Sulfate, total sulfide, and the carbon substrate (in most cases acetate) were determined quantitatively. H(2)S and CO(2) are continually removed by stripping with N(2). Optimal removal is achieved under pH conditions which are adjusted to values below the pK(a)-values of the acids. The H(2)S concentration in the stripped gas was 2% to 8% (v/v) if H(2)SO(4) and CH(3)COOH are fed to the recycle stream just before the stripping column.Microbiol conversion rates of 65 g of sulfate reduced per liter of bioreactor volume per day are achieved and bacterial conversion efficiencies for sulfate of more than 95% can be maintained if the concentration of undissociated H(2)S is kept below 40 to 50 mg/L. Porous glass spheres, lava beads, and polyurethane pellets are useful matrices for the attachment of the bacterial biomass. Theoretical aspects and the dependence of the overall conversion performance on selected process parameters are illustrated in the Appendix to this article. PMID:18609554

  1. The AAA+ proteins Pontin and Reptin enter adult age: From understanding their basic biology to the identification of selective inhibitors

    Directory of Open Access Journals (Sweden)

    Pedro M Matias

    2015-05-01

    Full Text Available Pontin and Reptin are related partner proteins belonging to the AAA+ (ATPases Associated with various cellular Activities family. They are implicated in multiple and seemingly unrelated processes encompassing the regulation of gene transcription, the remodeling of chromatin, DNA damage sensing and repair, and the assembly of protein and ribonucleoprotein complexes, among others. The 2nd International Workshop on Pontin and Reptin took place at the Instituto de Tecnologia Química e Biológica António Xavier in Oeiras, Portugal on October 10-12, 2014, and reported significant new advances on the mechanisms of action of these two AAA+ ATPases. The major points under discussion were related to the mechanisms through which these proteins regulate gene transcription, their roles as co-chaperones, and their involvement in pathophysiology, especially in cancer and ciliary biology and disease. Finally, they may become anticancer drug targets since small chemical inhibitors were shown to produce anti-tumor effects in animal models.

  2. Applications of Recombinant DNA Technology in Gastrointestinal Medicine and Hepatology: Basic Paradigms of Molecular Cell Biology. Part A: Eukaryotic Gene Structure and DNA Replication

    OpenAIRE

    Wild, Gary E; Papalia, Patrizia; Ropeleski, Mark J.; Faria, Julio; Thomson, Alan BR

    2000-01-01

    Progress in the basic sciences of cell and molecular biology has provided an exciting dimension that has translated into clinically relevant information in every medical subspecialty. Importantly, the application of recombinant DNA technology has played a major role in unravelling the intricacies related to the molecular pathophysiology of disease. This series of review articles constitutes a framework for the integration of the database of new information into the core knowledge base of conc...

  3. "Sickle Cell Anemia: Tracking down a Mutation": An Interactive Learning Laboratory That Communicates Basic Principles of Genetics and Cellular Biology

    Science.gov (United States)

    Jarrett, Kevin; Williams, Mary; Horn, Spencer; Radford, David; Wyss, J. Michael

    2016-01-01

    "Sickle cell anemia: tracking down a mutation" is a full-day, inquiry-based, biology experience for high school students enrolled in genetics or advanced biology courses. In the experience, students use restriction endonuclease digestion, cellulose acetate gel electrophoresis, and microscopy to discover which of three putative patients…

  4. Brain Basics

    Medline Plus

    Full Text Available ... normal brain development and function can go awry, leading to mental illnesses. Brain Basics will introduce you ... of DNA. Sometimes this copying process is imperfect, leading to a gene mutation that causes the gene ...

  5. Brain Basics

    Medline Plus

    Full Text Available ... interconnections. neuron —A nerve cell that is the basic, working unit of the brain and nervous system, which processes and transmits information. neurotransmitter —A chemical produced by ...

  6. Next generation tools to accelerate the synthetic biology process.

    Science.gov (United States)

    Shih, Steve C C; Moraes, Christopher

    2016-05-16

    Synthetic biology follows the traditional engineering paradigm of designing, building, testing and learning to create new biological systems. While such approaches have enormous potential, major challenges still exist in this field including increasing the speed at which this workflow can be performed. Here, we present recently developed microfluidic tools that can be used to automate the synthetic biology workflow with the goal of advancing the likelihood of producing desired functionalities. With the potential for programmability, automation, and robustness, the integration of microfluidics and synthetic biology has the potential to accelerate advances in areas such as bioenergy, health, and biomaterials. PMID:27146265

  7. Carbonation processes of basalts and ultra-basic rocks in subsurface conditions

    International Nuclear Information System (INIS)

    For mitigating against rising levels of carbon dioxide (CO2) in the atmosphere, several ways are envisaged to store it geologically. Among them, mineral trapping by carbonation of basic and ultra-basic rocks is thought to be the safest. However, little is known about the reaction kinetics and mechanisms of the process, which would ultimately make us able to foresee the fate of CO2 over long time spans, and possibly enhance the efficiency of the mineral trapping. As a consequence, this thesis aimed at bringing new constrains on the weathering processes of (ultra)basic silicates, with (or without) high pCO2. Original experimental data of dissolution and carbonation processes were acquired on five silicates: wollastonite (CaSiO3), forsterite (Mg2SiO4), diopside (CaMgSi2O6), lizardite (Mg3Si2O5(OH)4) and fayalite (Fe2SiO4). The main parameters which could affect the rates of carbonation were assessed: role and mechanism of formation of passivating layers, saturation state of the fluid, specific effect of CO2 and behaviour of iron (II). Each mineral was thought to be relevant to bring new insights on each one of these questions. Wollastonite carbonation was first investigated in batch reactors. At 90 C and pCO2 = 25 MPa, the reaction reaches completion within a couple of days. The measured carbonation rate is similar to the modelled one, indicating that the rate-limiting step of the process is wollastonite dissolution. Consequently, the thick amorphous silica coatings (≥ 100 μm) that form onto wollastonite surface do not prevent the fluid to reach the pristine mineral. This result is in agreement with the structure of the silica coating, determined to be meso-porous at the nm-scale. Besides, the chemical gradient of calcium across the silica layer suggests that it is formed by a dissolution-precipitation mechanism instead of a solid-state diffusion mechanism. On the other hand, the dissolution of forsteritic olivine is inhibited by the formation of a thin (∼ 40 nm

  8. Dynamic phases in control and information processing biological circuits

    Science.gov (United States)

    Vaikuntanathan, Suriyanarayanan

    2015-03-01

    Recent work using the mathematical framework of large deviation theory has shown that fluctuations about the steady state can have a particularly rich structure even in extremely simple non-equilibrium systems [Phys. Rev. E. 89, 062108, 2014]. In certain instances the fluctuations can encode the presence of a dynamical phase with properties distinct from those of the steady state of the system. The transition between these two regimes is akin to a first order thermodynamic phase transition. Specifically, it implies an extreme sensitivity of the system to changes in certain sets of parameters. I will show that such dynamical phase transitions can serve as a general organizing principle to understand biological circuits that are involved in information processing and control. I will focus on two specific examples: adaptation control in E. coli chemotaxis and ultra sensitive response of the E. coli flagella motor, to illustrate these calculations. This work also elucidates the role played by energy dissipation in ensuring control and suggests general guidelines for the construction of robust non equilibrium circuits that perform various specified functions.

  9. Oilfield wastewater treatment by combined microfiltration and biological processes.

    Science.gov (United States)

    Campos, J C; Borges, R M H; Oliveira Filho, A M; Nobrega, R; Sant'Anna, G L

    2002-01-01

    This work deals with the treatment of offshore oilfield wastewater from the Campos Basin (Rio de Janeiro State, Brazil). After coarse filtration, this high saline wastewater was microfiltrated through mixed cellulose ester (MCE) membranes, resulting in average removals of COD, TOC, O&G and phenols of 35%, 25%, 92% and 35%, respectively. The permeate effluent was fed into a 1-L air-lift reactor containing polystyrene particles of 2mm diameter, used as support material. This reactor was operated for 210 days, at three hydraulic retention times (HRT): 48, 24 and 12h. Even when operated at the lowest HRT (12 h), removal efficiencies of 65% COD, 80% TOC, 65% phenols and 40% ammonium were attained. The final effluent presented COD and TOC values of 230 and 55 mg/L, respectively. Results obtained by gas chromatography analyses and toxicity tests with Artemia salina showed that a significant improvement in the effluent's quality was achieved after treatment by the combined (microfiltration/biological) process. PMID:11767743

  10. Optimization of electrocoagulation process to treat biologically pretreated bagasse effluent

    Directory of Open Access Journals (Sweden)

    Thirugnanasambandham K.

    2014-01-01

    Full Text Available The main objective of the present study was to investigate the efficiency of electrocoagulation process as a post-treatment to treat biologically pretreated bagasse effluent using iron electrodes. The removal of chemical oxygen demand (COD and total suspended solids (TSS were studied under different operating conditions such as amount of dilution, initial pH, applied current and electrolyte dose by using response surface methodology (RSM coupled with four-factor three-level Box-Behnken experimental design (BBD. The experimental results were analyzed by Pareto analysis of variance (ANOVA and second order polynomial mathematical models were developed with high correlation of efficiency (R2 for COD, TSS removal and electrical energy consumption (EEC. The individual and combined effect of variables on responses was studied using three dimensional response surface plots. Under the optimum operating conditions, such as amount of dilution at 30 %, initial pH of 6.5, applied current of 8 mA cm-2 and electrolyte dose of 740 mg l-1 shows the higher removal efficiency of COD (98 % and TSS (93 % with EEC of 2.40 Wh, which were confirmed by validation experiments.

  11. Crowdsourcing and curation: perspectives from biology and natural language processing.

    Science.gov (United States)

    Hirschman, Lynette; Fort, Karën; Boué, Stéphanie; Kyrpides, Nikos; Islamaj Doğan, Rezarta; Cohen, Kevin Bretonnel

    2016-01-01

    Crowdsourcing is increasingly utilized for performing tasks in both natural language processing and biocuration. Although there have been many applications of crowdsourcing in these fields, there have been fewer high-level discussions of the methodology and its applicability to biocuration. This paper explores crowdsourcing for biocuration through several case studies that highlight different ways of leveraging 'the crowd'; these raise issues about the kind(s) of expertise needed, the motivations of participants, and questions related to feasibility, cost and quality. The paper is an outgrowth of a panel session held at BioCreative V (Seville, September 9-11, 2015). The session consisted of four short talks, followed by a discussion. In their talks, the panelists explored the role of expertise and the potential to improve crowd performance by training; the challenge of decomposing tasks to make them amenable to crowdsourcing; and the capture of biological data and metadata through community editing.Database URL: http://www.mitre.org/publications/technical-papers/crowdsourcing-and-curation-perspectives. PMID:27504010

  12. Microbiology and atmospheric processes: chemical interactions of primary biological aerosols

    Directory of Open Access Journals (Sweden)

    L. Deguillaume

    2008-07-01

    Full Text Available This paper discusses the influence of primary biological aerosols (PBA on atmospheric chemistry and vice versa through microbiological and chemical properties and processes. Several studies have shown that PBA represent a significant fraction of air particulate matter and hence affect the microstructure and water uptake of aerosol particles. Moreover, airborne micro-organisms, namely fungal spores and bacteria, can transform chemical constituents of the atmosphere by metabolic activity. Recent studies have emphasized the viability of bacteria and metabolic degradation of organic substances in cloud water. On the other hand, the viability and metabolic activity of airborne micro-organisms depend strongly on physical and chemical atmospheric parameters such as temperature, pressure, radiation, pH value and nutrient concentrations. In spite of recent advances, however, our knowledge of the microbiological and chemical interactions of PBA in the atmosphere is rather limited. Further targeted investigations combining laboratory experiments, field measurements, and modelling studies will be required to characterize the chemical feedbacks, microbiological activities at the air/snow/water interface supplied to the atmosphere.

  13. Five-Year Wilkinson Microwave Anisotropy Probe (WMAP) Observations: Data Processing, Sky Maps, and Basic Results

    Science.gov (United States)

    Weiland, J.L.; Hill, R.S.; Odegard, 3.; Larson, D.; Bennett, C.L.; Dunkley, J.; Jarosik, N.; Page, L.; Spergel, D.N.; Halpern, M.; Meyer, S.S.; Tucker, G.S.; Wright, E.L.

    2008-01-01

    The Wilkinson Microwave Anisotropy Probe (WMAP) is a Medium-Class Explorer (MIDEX) satellite aimed at elucidating cosmology through full-sky observations of the cosmic microwave background (CMB). The WMAP full-sky maps of the temperature and polarization anisotropy in five frequency bands provide our most accurate view to date of conditions in the early universe. The multi-frequency data facilitate the separation of the CMB signal from foreground emission arising both from our Galaxy and from extragalactic sources. The CMB angular power spectrum derived from these maps exhibits a highly coherent acoustic peak structure which makes it possible to extract a wealth of information about the composition and history of the universe. as well as the processes that seeded the fluctuations. WMAP data have played a key role in establishing ACDM as the new standard model of cosmology (Bennett et al. 2003: Spergel et al. 2003; Hinshaw et al. 2007: Spergel et al. 2007): a flat universe dominated by dark energy, supplemented by dark matter and atoms with density fluctuations seeded by a Gaussian, adiabatic, nearly scale invariant process. The basic properties of this universe are determined by five numbers: the density of matter, the density of atoms. the age of the universe (or equivalently, the Hubble constant today), the amplitude of the initial fluctuations, and their scale dependence. By accurately measuring the first few peaks in the angular power spectrum, WMAP data have enabled the following accomplishments: Showing the dark matter must be non-baryonic and interact only weakly with atoms and radiation. The WMAP measurement of the dark matter density puts important constraints on supersymmetric dark matter models and on the properties of other dark matter candidates. With five years of data and a better determination of our beam response, this measurement has been significantly improved. Precise determination of the density of atoms in the universe. The agreement between

  14. Photo-activated biological processes as quantum measurements

    CERN Document Server

    Imamoglu, Atac

    2014-01-01

    We outline a framework for describing photo-activated biological reactions as generalized quantum measurements of external fields, for which the biological system takes on the role of a quantum meter. By using general arguments regarding the Hamiltonian that describes the measurement interaction, we identify the cases where it is essential for a complex chemical or biological system to exhibit non-equilibrium quantum coherent dynamics in order to achieve the requisite functionality. We illustrate the analysis by considering measurement of the solar radiation field in photosynthesis and measurement of the earth's magnetic field in avian magnetoreception.

  15. Bottom-up engineering of biological systems through standard bricks: a modularity study on basic parts and devices.

    Directory of Open Access Journals (Sweden)

    Lorenzo Pasotti

    Full Text Available BACKGROUND: Modularity is a crucial issue in the engineering world, as it enables engineers to achieve predictable outcomes when different components are interconnected. Synthetic Biology aims to apply key concepts of engineering to design and construct new biological systems that exhibit a predictable behaviour. Even if physical and measurement standards have been recently proposed to facilitate the assembly and characterization of biological components, real modularity is still a major research issue. The success of the bottom-up approach strictly depends on the clear definition of the limits in which biological functions can be predictable. RESULTS: The modularity of transcription-based biological components has been investigated in several conditions. First, the activity of a set of promoters was quantified in Escherichia coli via different measurement systems (i.e., different plasmids, reporter genes, ribosome binding sites relative to an in vivo reference promoter. Second, promoter activity variation was measured when two independent gene expression cassettes were assembled in the same system. Third, the interchangeability of input modules (a set of constitutive promoters and two regulated promoters connected to a fixed output device (a logic inverter expressing GFP was evaluated. The three input modules provide tunable transcriptional signals that drive the output device. If modularity persists, identical transcriptional signals trigger identical GFP outputs. To verify this, all the input devices were individually characterized and then the input-output characteristic of the logic inverter was derived in the different configurations. CONCLUSIONS: Promoters activities (referred to a standard promoter can vary when they are measured via different reporter devices (up to 22%, when they are used within a two-expression-cassette system (up to 35% and when they drive another device in a functionally interconnected circuit (up to 44%. This paper

  16. A simple and rapid chromatographic method to determine unauthorized basic colorants (rhodamine B, auramine O, and pararosaniline) in processed foods.

    Science.gov (United States)

    Tatebe, Chiye; Zhong, Xining; Ohtsuki, Takashi; Kubota, Hiroki; Sato, Kyoko; Akiyama, Hiroshi

    2014-09-01

    A simple and rapid high-performance liquid chromatography (HPLC) method to determine basic colorants such as pararosaniline (PA), auramine O (AO), and rhodamine B (RB) in various processed foods was developed. Linearity of the calibration curves ranged from 0.05 to 50 μg/mL for PA and 0.05-100 μg/mL for AO and RB. The detection and quantification limits (LOD and LOQ) of the basic colorants, which were evaluated as signal-to-noise ratios of 3 for LOD and 10 for LOQ, ranged from 0.0125 to 0.05 and 0.025 to 0.125 μg/g, respectively. The recoveries and relative standard deviations of three basic colorants in six processed foods, namely, chili sauce, curry paste, gochujang (hot pepper paste), tandoori chicken (roasted chicken prepared with yogurt and spices), powder soup, and shrimp powder ranged from 70.2% to 102.8% and 0.8% to 8.0%, respectively. The intraday precision of the recovery test ranged from 1.7% to 4.5%, whereas the interday precision ranged from 3.7% to 7.7%. The reported method has been successfully applied to basic colorant determination in various processed foods such as fat-based food matrices (curry paste and tandoori chicken), chili products (gochujang and chili sauce), and protein-based products (shrimp powder and powder soup). Thin layer chromatography and liquid chromatography/mass spectrometry methods for the determination of basic colorants in processed foods were also developed for rapid analysis and identification, respectively. These methods are very useful for monitoring unauthorized basic colorants in inspection centers or quarantine laboratories in many countries. PMID:25473512

  17. A Trip Through the Virtual Ocean: Understanding Basic Oceanic Process Using Real Data and Collaborative Learning

    Science.gov (United States)

    Hastings, D. W.

    2012-12-01

    How can we effectively teach undergraduates the fundamentals of physical, chemical and biological processes in the ocean? Understanding physical circulation and biogeochemical processes is essential, yet it can be difficult for an undergraduate to easily grasp important concepts such as using temperature and salinity as conservative tracers, nutrient distribution, ageing of water masses, and thermocline variability. Like many other topics, it is best learned not in a lecture setting, but working with real data: plotting values, making predictions, and making mistakes. Part I: Using temperature and salinity values from any location in the world ocean (World Ocean Atlas), combined with an excellent user interface (http://ferret.pmel.noaa.gov), students are asked to answer a series of specific questions related to ocean circulation. Using established temperature and salinity values to characterize different water masses, students are able to identify various water masses and gain insight to physical circulation processes. Questions related to ocean circulation include: How far south and at what depth does NADW extend into the S. Atlantic? Is deep water formed in the North Pacific? How and why does the depth of the thermocline vary with latitude in the Atlantic Ocean? How deep does the Mediterranean Water descend as it leaves the Straits of Gibraltar? How far into the Atlantic can you see the influence of the Amazon River? Is there any Antarctic Bottom Water in the North Pacific? Collaborating with another student typically leads to increased engagement. Especially in large lecture settings, where one teacher is not able to address student questions or concerns, working in pairs or in groups of three is best. Part II: Using the same web-based viewer and data set students are subsequently assigned one oceanic property (phosphate, nitrate, silicate, O2, or AOU) and asked to construct three different plots: 1) vertical depth profile at one location; 2) latitude vs. depth

  18. Carbonate Beaches: A Balance Between Biological and Physical Processes

    Science.gov (United States)

    Nairn, R.; Risk, M.

    2004-12-01

    Carbonate beaches are a unique example of the interaction between biological processes, creating the sediments, and physical processes, moving and often removing the sediments. On the sediment supply side, carbonate sediments are born, not made. They exist in dynamic equilibrium between production and destruction. Following the creation of carbonate sediment in coral reef and lagoon environments, the sediments are moved shoreward to the beach, transport along the shore and sometimes, eventually lost offshore, often as the result of tropical storms. Comprehensive studies of the balance between the supply and loss of carbonate sediments and beach dynamics have been completed for the islands of Mauritius and Barbados. Field studies and remote sensing (Compact Airborne Spectrometry Imaging) have been applied to develop carbonate sediment production rates for a range of reef and lagoon conditions. Using GIS, these production rates have been integrated to determine sediment supply rates for different segments of the coastline. 1-D and 2-D models of waves, hydrodynamics, sediment transport and morphodynamics were set-up and tested against observed beach response to storm events or a sequence of storm events. These complex deterministic models are not suitable for application over periods of decades. However, it was possible to characterize storm events by the extent of sand loss, and relate this to key descriptive factors for groups of storm events, thereby encapsulating the erosion response. A long-term predictive tool for evaluating beach erosion and accretion response, over a period of several decades, was developed by combining the supply rates for carbonate sediment and the encapsulated representation of the loss rates through physical processes. The ability of this predictive tool was successfully tested against observed long term beach evolution along sections of the coast in Barbados and Mauritius using air photo analysis in GIS for shoreline change over periods

  19. Students’ Ability to Solve Process-diagram Problems in Secondary Biology Education

    NARCIS (Netherlands)

    M. Kragten; W. Admiraal; G. Rijlaarsdam

    2015-01-01

    Process diagrams are important tools in biology for explaining processes such as protein synthesis, compound cycles and the like. The aim of the present study was to measure the ability to solve process-diagram problems in biology and its relationship with prior knowledge, spatial ability and workin

  20. Basic Principles of Organization of the Medium and Thinking Process of the Human in its Conceptual Presentation

    OpenAIRE

    Belov, Yuriy; Rabinovich, Zinoviy

    2008-01-01

    Given in the report conceptual presentation of the main principles of fractal-complexity Ration of the media and thinking processes of the human was formulated on the bases of the cybernetic interpretation of scientific information (basically from neurophysiology and neuropsychology, containing the interpretation giving the best fit to the authors point of view) and plausible hypothesis's, filling the lack of knowledge.

  1. Diffusion and association processes in biological systems: theory, computation and experiment

    OpenAIRE

    Mereghetti Paolo; Kokh Daria; McCammon J Andrew; Wade Rebecca C

    2011-01-01

    Abstract Macromolecular diffusion plays a fundamental role in biological processes. Here, we give an overview of recent methodological advances and some of the challenges for understanding how molecular diffusional properties influence biological function that were highlighted at a recent workshop, BDBDB2, the second Biological Diffusion and Brownian Dynamics Brainstorm.

  2. Testing Results of Basic Educational Professional Master Module “The Organization of Educational Process in Preschool Organization”

    OpenAIRE

    Stozharova M.Y.; Zaitseva I.G.

    2015-01-01

    The article describes the testing results of module "The organization of educational process in preschool organization" in a basic professional educational master program in some universities of Russia. It proves the necessity to develop the program of the educational module "The organization of educational process in preschool organization". We approved its theoretical originality and practical significance and analyzed the module structure as an integrated set of compulsory general scientif...

  3. Proceedings of the 42nd basic science seminar. (The 7th workshop on neutron crystallography in biology)

    International Nuclear Information System (INIS)

    42nd advanced science seminar (the 7th workshop on neutron crystallography in biology) was held on October, 25-26, 1995 at Tokai. Forty three participants from university, research institute and private company took part in the workshop and there were 17 lectures given. The proceedings collect the figures and tables which the speakers used in their lectures. (author)

  4. A simple and rapid chromatographic method to determine unauthorized basic colorants (rhodamine B, auramine O, and pararosaniline) in processed foods

    OpenAIRE

    Tatebe, Chiye; Zhong, Xining; Ohtsuki, Takashi; Kubota, Hiroki; Sato, Kyoko; Akiyama, Hiroshi

    2014-01-01

    A simple and rapid high-performance liquid chromatography (HPLC) method to determine basic colorants such as pararosaniline (PA), auramine O (AO), and rhodamine B (RB) in various processed foods was developed. Linearity of the calibration curves ranged from 0.05 to 50 μg/mL for PA and 0.05–100 μg/mL for AO and RB. The detection and quantification limits (LOD and LOQ) of the basic colorants, which were evaluated as signal-to-noise ratios of 3 for LOD and 10 for LOQ, ranged from 0.0125 to 0.05 ...

  5. Documentation control process of Brazilian multipurpose reactor: conceptual design and basic design

    Energy Technology Data Exchange (ETDEWEB)

    Kibrit, Eduardo; Prates, Jose Eduardo; Longo, Guilherme Carneiro; Salvetti, Tereza Cristina, E-mail: ekibrit@ipen.br, E-mail: jeprates@ipen.br, E-mail: glongo@ipen.br, E-mail: salvetti@ipen.br [Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN-SP), Sao Paulo, SP (Brazil)

    2015-07-01

    Established in the scope of Plan of Action of the Ministry of Science, Technology and Innovation (PACTI/MCTI) in 2007, the construction of the Brazilian Multipurpose Reactor (RMB) is on the way. This type of reactor has a broad spectrum of applications in the nuclear field and related technologies such as the radioisotopes used as supplies in the production of radiopharmaceuticals, with very much benefit to the Brazilian society being, therefore, the main goal of the Project. RMB Project consists of the following stages: site selection and site evaluation; design (conceptual design, basic design, detailed design and experimental design); construction (procurement, manufacturing; civil construction; electromechanical construction and assembling); commissioning; operation and decommissioning. Each stage requires adaptation of human resources for the stage schedule execution. The implementation of a project of this magnitude requires a complex project management, which covers not only technical, but also administrative areas. Licensing, financial resources, quality and document control systems, engineering are some of the areas involved in project success. The development of the conceptual and basic designs involved the participation of three main engineering companies. INTERTECHNE Consultores S.A. was in charge of conceptual and basic designs for conventional systems of buildings and infrastructure. INVAP S.E. was responsible for preparing the basic design of the reactor core and annexes. MRS Estudos Ambientais Ltda. has prepared documents for environmental licensing. This paper describes the procedures used during conceptual and basic design stages to control design documentation and flow of this documentation, involving the analysis and incorporation of comments from experts, control and storage of a volume of approximately 15,000 documents. (author)

  6. Documentation control process of Brazilian multipurpose reactor: conceptual design and basic design

    International Nuclear Information System (INIS)

    Established in the scope of Plan of Action of the Ministry of Science, Technology and Innovation (PACTI/MCTI) in 2007, the construction of the Brazilian Multipurpose Reactor (RMB) is on the way. This type of reactor has a broad spectrum of applications in the nuclear field and related technologies such as the radioisotopes used as supplies in the production of radiopharmaceuticals, with very much benefit to the Brazilian society being, therefore, the main goal of the Project. RMB Project consists of the following stages: site selection and site evaluation; design (conceptual design, basic design, detailed design and experimental design); construction (procurement, manufacturing; civil construction; electromechanical construction and assembling); commissioning; operation and decommissioning. Each stage requires adaptation of human resources for the stage schedule execution. The implementation of a project of this magnitude requires a complex project management, which covers not only technical, but also administrative areas. Licensing, financial resources, quality and document control systems, engineering are some of the areas involved in project success. The development of the conceptual and basic designs involved the participation of three main engineering companies. INTERTECHNE Consultores S.A. was in charge of conceptual and basic designs for conventional systems of buildings and infrastructure. INVAP S.E. was responsible for preparing the basic design of the reactor core and annexes. MRS Estudos Ambientais Ltda. has prepared documents for environmental licensing. This paper describes the procedures used during conceptual and basic design stages to control design documentation and flow of this documentation, involving the analysis and incorporation of comments from experts, control and storage of a volume of approximately 15,000 documents. (author)

  7. Proceedings of the 182nd basic science seminar (The workshop on neutron structural biology ) 'New frontiers of structural biology advanced by solution scattering'

    Energy Technology Data Exchange (ETDEWEB)

    Fujiwara, Satoru (ed.) [Japan Atomic Energy Research Inst., Tokai, Ibaraki (Japan). Tokai Research Establishment

    2001-03-01

    182nd advanced science seminar (the workshop on neutron structural biology) was held in February 9-10, 2000 at Tokai. Thirty-six participants from universities, research institutes, and private companies took part in the workshop, and total of 24 lectures were given. This proceedings collects abstracts, the figures and tables, which the speakers used in their lectures. The proceedings contains two reviews from the point of view of x-ray and neutron scatterings, and six subjects (21 papers) including neutron and x-ray scattering in the era of structure genomics, structural changes detected with solution scattering, a new way in structural biology opened by neutron crystallography and neutron scattering, x-ray sources and detectors, simulation and solution scattering, and neutron sources and detectors. (Kazumata, Y.)

  8. Proceedings of the 182nd basic science seminar (The workshop on neutron structural biology ) 'New frontiers of structural biology advanced by solution scattering'

    International Nuclear Information System (INIS)

    182nd advanced science seminar (the workshop on neutron structural biology) was held in February 9-10, 2000 at Tokai. Thirty-six participants from universities, research institutes, and private companies took part in the workshop, and total of 24 lectures were given. This proceedings collects abstracts, the figures and tables, which the speakers used in their lectures. The proceedings contains two reviews from the point of view of x-ray and neutron scatterings, and six subjects (21 papers) including neutron and x-ray scattering in the era of structure genomics, structural changes detected with solution scattering, a new way in structural biology opened by neutron crystallography and neutron scattering, x-ray sources and detectors, simulation and solution scattering, and neutron sources and detectors. (Kazumata, Y.)

  9. Engineering scalable biological systems

    OpenAIRE

    Lu, Timothy K.

    2010-01-01

    Synthetic biology is focused on engineering biological organisms to study natural systems and to provide new solutions for pressing medical, industrial, and environmental problems. At the core of engineered organisms are synthetic biological circuits that execute the tasks of sensing inputs, processing logic, and performing output functions. In the last decade, significant progress has been made in developing basic designs for a wide range of biological circuits in bacteria, yeast, and mammal...

  10. Biological Signal Processing with a Genetic Toggle Switch

    OpenAIRE

    Patrick Hillenbrand; Georg Fritz; Ulrich Gerland

    2013-01-01

    Complex gene regulation requires responses that depend not only on the current levels of input signals but also on signals received in the past. In digital electronics, logic circuits with this property are referred to as sequential logic, in contrast to the simpler combinatorial logic without such internal memory. In molecular biology, memory is implemented in various forms such as biochemical modification of proteins or multistable gene circuits, but the design of the regulatory interface, ...

  11. Reactome: a database of reactions, pathways and biological processes

    OpenAIRE

    Croft, David; O’Kelly, Gavin; Wu, Guanming; Haw, Robin; Gillespie, Marc; Matthews, Lisa; Caudy, Michael; Garapati, Phani; Gopinath, Gopal; Jassal, Bijay; Jupe, Steven; Kalatskaya, Irina; Mahajan, Shahana; May, Bruce; Ndegwa, Nelson

    2010-01-01

    Reactome (http://www.reactome.org) is a collaboration among groups at the Ontario Institute for Cancer Research, Cold Spring Harbor Laboratory, New York University School of Medicine and The European Bioinformatics Institute, to develop an open source curated bioinformatics database of human pathways and reactions. Recently, we developed a new web site with improved tools for pathway browsing and data analysis. The Pathway Browser is an Systems Biology Graphical Notation (SBGN)-based visualiz...

  12. Report of 4th research meeting on basic process of fuel cycle for nuclear fusion reactors, Yayoi Research Group

    International Nuclear Information System (INIS)

    In this meeting, the problem of plasma exhaust in actual machines, the problem of the basic process for recovering tritium from breeder materials, the DT experiment at TFTR, the basic research on superpermeation and so on were taken up. At the meeting, lectures were given on the present state of the research on LHD divertor exhaust method, particle balance in TEXTOR, ALT-2 pump limiter experiment, the recovery of tritium from liquid breeder materials, the surface process of tritium release from Li ceramics, DT experiment at TFTR and the behavior of hydrogen in niobium and the possibility of superpermeation. In this report, the summaries of the lectures are collected, and also the program of the meeting and the list of attendants are shown. (K.I.)

  13. Proceeding of the Scientific Meeting and Presentation on Basic Research of Nuclear Science and Technology: Book II. Nuclear Chemistry, Process Technology, and Radioactive Waste Processing and Environment

    International Nuclear Information System (INIS)

    The proceeding contains papers presented on Scientific Meeting and Presentation on on Basic Research of Nuclear Science and Technology, held in Yogyakarta, 25-27 April 1995. This proceeding is second part of two books published for the meeting contains papers on nuclear chemistry, process technology, and radioactive waste management and environment. There are 62 papers indexed individually. (ID)

  14. Monitoring the activated sludge biological process in a waste water treatment plant; Control de proceso biologico por fangos activados de una EDAR

    Energy Technology Data Exchange (ETDEWEB)

    Serrano, E.

    1996-08-01

    As well as monitoring the physicochemical parameters in waste water treatment plants, it is also necessary to keep track of the biological process. Respirometry is the technique that most closely follows the biological purification process and is therefore the most appropriate one to use in monitoring it. The different concepts concerning the respiration rate-basic, exogenous, total, maximum, specific and nitrification are defined for continuous and batch applications. definitions are also given of the main technologic and analytical parameters in ordinary use. Finally, the principles on which respirometry is based and its practical applications in waste water treatment plants are described.

  15. Effects of multiple enzyme–substrate interactions in basic units of cellular signal processing

    International Nuclear Information System (INIS)

    Covalent modification cycles are a ubiquitous feature of cellular signalling networks. In these systems, the interaction of an active enzyme with the unmodified form of its substrate is essential for signalling to occur. However, this interaction is not necessarily the only enzyme–substrate interaction possible. In this paper, we analyse the behaviour of a basic model of signalling in which additional, non-essential enzyme–substrate interactions are possible. These interactions include those between the inactive form of an enzyme and its substrate, and between the active form of an enzyme and its product. We find that these additional interactions can result in increased sensitivity and biphasic responses, respectively. The dynamics of the responses are also significantly altered by the presence of additional interactions. Finally, we evaluate the consequences of these interactions in two variations of our basic model, involving double modification of substrate and scaffold-mediated signalling, respectively. We conclude that the molecular details of protein–protein interactions are important in determining the signalling properties of enzymatic signalling pathways. (paper)

  16. Pulsed electrical discharges for medicine and biology techniques, processes, applications

    CERN Document Server

    Kolikov, Victor

    2015-01-01

    This book presents the application of pulsed electrical discharges in water and water dispersions of metal nanoparticles in medicine (surgery, dentistry, and oncology), biology, and ecology. The intensive electrical and shock waves represent a novel technique to destroy viruses and this way to  prepare anti-virus vaccines. The method of pulsed electrical discharges in water allows to decontaminate water from almost all known bacteria and spores of fungi being present in human beings. The nanoparticles used are not genotoxic and mutagenic. This book is useful for researchers and graduate students.

  17. Coupled model of physical and biological processes affecting maize pollination

    Science.gov (United States)

    Arritt, R.; Westgate, M.; Riese, J.; Falk, M.; Takle, E.

    2003-04-01

    Controversy over the use of genetically modified (GM) crops has led to increased interest in evaluating and controlling the potential for inadvertent outcrossing in open-pollinated crops such as maize. In response to this problem we have developed a Lagrangian model of pollen dispersion as a component of a coupled end-to-end (anther to ear) physical-biological model of maize pollination. The Lagrangian method is adopted because of its generality and flexibility: first, the method readily accommodates flow fields of arbitrary complexity; second, each element of the material being transported can be identified by its source, time of release, or other properties of interest. The latter allows pollen viability to be estimated as a function of such factors as travel time, temperature, and relative humidity, so that the physical effects of airflow and turbulence on pollen dispersion can be considered together with the biological aspects of pollen release and viability. Predicted dispersion of pollen compares well both to observations and to results from a simpler Gaussian plume model. Ability of the Lagrangian model to handle complex air flows is demonstrated by application to pollen dispersion in the vicinity of an agricultural shelter belt. We also show results indicating that pollen viability can be quantified by an "aging function" that accounts for temperature, humidity, and time of exposure.

  18. Basic nuclear processes affected by histone acetyltransferases and histone deacetylase inhibitors

    Czech Academy of Sciences Publication Activity Database

    Legartová, Soňa; Stixová, Lenka; Strnad, Hynek; Kozubek, Stanislav; Martinet, N.; Dekker, F.J.; Franěk, Michal; Bártová, Eva

    2013-01-01

    Roč. 5, č. 4 (2013), s. 379-396. ISSN 1750-1911 R&D Projects: GA MŠk(CZ) LD11020; GA ČR(CZ) GAP302/10/1022; GA ČR(CZ) GBP302/12/G157; GA ČR(CZ) GA13-07822S; GA ČR(CZ) EE2.3.30.0030 Institutional support: RVO:68081707 ; RVO:68378050 Keywords : cDNA microarray * DNA repair * epi-drug Subject RIV: BO - Biophysics; EB - Genetics ; Molecular Biology (UMG-J) Impact factor: 5.215, year: 2013

  19. Brain Basics

    Medline Plus

    Full Text Available ... will fire. This enhances the electrical flow among brain cells required for normal function and plays an important ... of neurons and their interconnections. neuron —A nerve cell that is the basic, working unit of the brain and nervous system, which processes and transmits information. ...

  20. The 5 Alpha-Reductase Isozyme Family: A Review of Basic Biology and Their Role in Human Diseases

    Directory of Open Access Journals (Sweden)

    Faris Azzouni

    2012-01-01

    Full Text Available Despite the discovery of 5 alpha-reduction as an enzymatic step in steroid metabolism in 1951, and the discovery that dihydrotestosterone is more potent than testosterone in 1968, the significance of 5 alpha-reduced steroids in human diseases was not appreciated until the discovery of 5 alpha-reductase type 2 deficiency in 1974. Affected males are born with ambiguous external genitalia, despite normal internal genitalia. The prostate is hypoplastic, nonpalpable on rectal examination and approximately 1/10th the size of age-matched normal glands. Benign prostate hyperplasia or prostate cancer does not develop in these patients. At puberty, the external genitalia virilize partially, however, secondary sexual hair remains sparse and male pattern baldness and acne develop rarely. Several compounds have been developed to inhibit the 5 alpha-reductase isozymes and they play an important role in the prevention and treatment of many common diseases. This review describes the basic biochemical properties, functions, tissue distribution, chromosomal location, and clinical significance of the 5 alpha-reductase isozyme family.

  1. Systems Biology Graphical Notation: Process Description language Level 1 Version 1.3.

    Science.gov (United States)

    Moodie, Stuart; Le Novère, Nicolas; Demir, Emek; Mi, Huaiyu; Villéger, Alice

    2015-01-01

    The Systems Biological Graphical Notation (SBGN) is an international community effort for standardized graphical representations of biological pathways and networks. The goal of SBGN is to provide unambiguous pathway and network maps for readers with different scientific backgrounds as well as to support efficient and accurate exchange of biological knowledge between different research communities, industry, and other players in systems biology. Three SBGN languages, Process Description (PD), Entity Relationship (ER) and Activity Flow (AF), allow for the representation of different aspects of biological and biochemical systems at different levels of detail. The SBGN Process Description language represents biological entities and processes between these entities within a network. SBGN PD focuses on the mechanistic description and temporal dependencies of biological interactions and transformations. The nodes (elements) are split into entity nodes describing, e.g., metabolites, proteins, genes and complexes, and process nodes describing, e.g., reactions and associations. The edges (connections) provide descriptions of relationships (or influences) between the nodes, such as consumption, production, stimulation and inhibition. Among all three languages of SBGN, PD is the closest to metabolic and regulatory pathways in biological literature and textbooks, but its well-defined semantics offer a superior precision in expressing biological knowledge. PMID:26528561

  2. THE BASIC LAWS AND FEATURES OF CYTOKINE DYNAMICS IN PROCESS AND EARLY TERMS AFTER CARDIOPULMONARY BYPASS

    Directory of Open Access Journals (Sweden)

    S. I. Suskov

    2011-01-01

    Full Text Available The basic variants of cytokines reactions defining type of organ dysfunctions are revealed in the course of car- diopulmonary bypass and in the early postoperative period. Their character and expression, depends on gravity preoperative an immunodeficiency and initial degree of heart insufficiency. Diphasic dynamics of development of system inflammatory reaction is confirmed after cardiopulmonary bypass: increase of levels proinflammatory cytokines is in the first phase and anti-inflammatory cytokines with development immunodepression and cellular anergy in is the second phase. Also, key role IL-1Ra is revealed in restraint of hyperactivation of system inflam- matory reaction. Blood whey levels IL-6, IL-8, G-CSF, TNF-α and IL-1Ra should be defined to cardiopulmonary bypass, in 10–12 hours, 24 hours and 3 days after cardiopulmonary bypass and may be used as prognostic criteria of development of postoperative complications. 

  3. Lignocellulose Biomass: Constitutive Polymers. Biological Processes of Lignin Degradation

    International Nuclear Information System (INIS)

    The structure of the lignocellulosic materials and the chemical composition of their main constitutive polymers, cellulose, hemicelluloses and lignin are described. The most promising transformation processes according to the type of biomass considered: hardwood, softwood an herbaceous and the perspectives of biotechnological processes for bio pulping, bio bleaching and effluents decolorisation in the paper pulp industry are also discussed. (Author) 7 refs

  4. Aerobic Digestion. Biological Treatment Process Control. Instructor's Guide.

    Science.gov (United States)

    Klopping, Paul H.

    This unit on aerobic sludge digestion covers the theory of the process, system components, factors that affect the process performance, standard operational concerns, indicators of steady-state operations, and operational problems. The instructor's guide includes: (1) an overview of the unit; (2) lesson plan; (3) lecture outline (keyed to a set of…

  5. Generalized Poisson-Kac Processes: Basic Properties and Implications in Extended Thermodynamics and Transport

    Science.gov (United States)

    Giona, Massimiliano; Brasiello, Antonio; Crescitelli, Silvestro

    2016-04-01

    We introduce a new class of stochastic processes in Rnmo>,mo>{{{mathbb R}}^n}, referred to as generalized Poisson-Kac (GPK) processes, that generalizes the Poisson-Kac telegrapher's random motion in higher dimensions. These stochastic processes possess finite propagation velocity, almost everywhere smooth trajectories, and converge in the Kac limit to Brownian motion. GPK processes are defined by coupling the selection of a bounded velocity vector from a family of N distinct ones with a Markovian dynamics controlling probabilistically this selection. This model can be used as a probabilistic tool for a stochastically consistent formulation of extended thermodynamic theories far from equilibrium.

  6. In situ single molecule imaging of cell membranes: linking basic nanotechniques to cell biology, immunology and medicine

    Science.gov (United States)

    Pi, Jiang; Jin, Hua; Yang, Fen; Chen, Zheng W.; Cai, Jiye

    2014-10-01

    The cell membrane, which consists of a viscous phospholipid bilayer, different kinds of proteins and various nano/micrometer-sized domains, plays a very important role in ensuring the stability of the intracellular environment and the order of cellular signal transductions. Exploring the precise cell membrane structure and detailed functions of the biomolecules in a cell membrane would be helpful to understand the underlying mechanisms involved in cell membrane signal transductions, which could further benefit research into cell biology, immunology and medicine. The detection of membrane biomolecules at the single molecule level can provide some subtle information about the molecular structure and the functions of the cell membrane. In particular, information obtained about the molecular mechanisms and other information at the single molecule level are significantly different from that detected from a large amount of biomolecules at the large-scale through traditional techniques, and can thus provide a novel perspective for the study of cell membrane structures and functions. However, the precise investigations of membrane biomolecules prompts researchers to explore cell membranes at the single molecule level by the use of in situ imaging methods, as the exact conformation and functions of biomolecules are highly controlled by the native cellular environment. Recently, the in situ single molecule imaging of cell membranes has attracted increasing attention from cell biologists and immunologists. The size of biomolecules and their clusters on the cell surface are set at the nanoscale, which makes it mandatory to use high- and super-resolution imaging techniques to realize the in situ single molecule imaging of cell membranes. In the past few decades, some amazing imaging techniques and instruments with super resolution have been widely developed for molecule imaging, which can also be further employed for the in situ single molecule imaging of cell membranes. In

  7. A novel process of dye wastewater treatment by linking advanced chemical oxidation with biological oxidation

    OpenAIRE

    Zou Haiming; Ma Wanzheng; Wang Yan

    2015-01-01

    Dye wastewater is one of typically non-biodegradable industrial effluents. A new process linking Fenton’s oxidation with biological oxidation proposed in this study was investigated to degrade the organic substances from real dye wastewater. During the combination process, the Fenton’s oxidation process can reduce the organic load and enhance biodegradability of dye wastewater, which is followed by biological aerated filter (BAF) system to further remove organic substances in terms of dischar...

  8. Two-way feedback between biology and deep Earth processes

    Science.gov (United States)

    Sleep, N. H.; Pope, E.; Bird, D.

    2012-12-01

    The presence of the metamorphic products of banded iron formation and black shale indicate that the Earth teemed with life by the time of the earliest preserved rocks, ca. 3.85 Ga. Iron and sulfur-based anoxygenic photosynthesis with full carbon cycles was present by this time. The pH of the ocean was ~8. The lack of older rock record cloaks pre-biotic evolution and the origin of life. Nascent and early life obtained energy from chemical disequilibria in rocks rather than sunlight. Appraising putative rock pre-biological environments is difficult in that life has modified the composition of the atmosphere, the hydrosphere, and sedimentary rocks. It has greatly affected the composition of crystalline crustal rocks and measurably modified the mantle. Conversely, hard crustal rocks and the mantle likely sequester a very ancient record of last resort. Theory provides additional insight. The Earth's surface and interior cooled following the moon-forming impact. The oceans passed through conditions favored by thermophile organisms before becoming clement. Ocean pH was ~6 and bars of CO2 existed in the atmosphere. Subduction removed the CO2 into the mantle before the time of rock record. Serpentinite likely existed in land, tidal, and marine environments as it does today. Seafloor spreading and arc volcanism likely drove hydrothermal circulation. The late heavy bombardment occurred after ca. 4.1 Ga; low heat flow environments and hence habitable subsurface refugia existed. It is conceivable that one or a few ocean-boiling impacts left thermophile survivors in their wake. Overall, the molecular biology of extant life likely conserves features that relate to its earliest abodes.

  9. Basics of Polar-Format algorithm for processing Synthetic Aperture Radar images.

    Energy Technology Data Exchange (ETDEWEB)

    Doerry, Armin Walter

    2012-05-01

    The purpose of this report is to provide a background to Synthetic Aperture Radar (SAR) image formation using the Polar Format (PFA) processing algorithm. This is meant to be an aid to those tasked to implement real-time image formation using the Polar Format processing algorithm.

  10. THE TRANSFORMATIONAL PROCESSES INVOLVING MOTOR SKILLS THAT OCCUR UNDER THE INFLUENCE OF BASIC PRELIMINARY TRAINING IN YOUNG HANDBALL PLAYERS

    Directory of Open Access Journals (Sweden)

    Markovic Sasa

    2011-06-01

    Full Text Available The population from which we extracted a sample of 76 subjects consisted of elementary school students in Kursumlija, all male, aged 12-13, who were divided into a sub-sample consisting of 38 young handball players who took part in the training sessions of a school of handball and another sub-sample consisting of 38 non-athletes, who only took part in their regular physical education classes. The aim of the research was to determine the transformation processes involving motor skills, which occur under the influence of basic preliminary training in young handball players. The subject matter of the study was to examine whether a statistically significant increase in the level of motor skills would occur under the influence of physical exercise as part of basic preliminary training in the final as compared to the initial state. Six motor tests which define the dimensions of explosive and repetitive strength were used. The results of the research indicate that significant transformational processes involving the motor skills of young handball players occurred in the final as compared to the initial measuring, under the influence of basic preliminary training.

  11. Processing and classification of biological images: Application to histology

    OpenAIRE

    Nunes, B.; Rato, Luis; Capela e Silva, F.; Rafael, A; Cabrita, AS

    2011-01-01

    This article deals with a histological problem by using image processing and feature extraction in images of renal tissues of rats and their classification through various methods such as: Bayesian inference, decision trees and support vector machines.

  12. Sustainable Production Process of Biological Mineral Feed Additives

    Directory of Open Access Journals (Sweden)

    Agnieszka Zielinska

    2009-01-01

    Full Text Available Problem statement: This study discussed the problem of accumulation of Zn and Cu in the topsoil as a result of application of mineral feed additives that possess low bioavailability in animal diet. The review considered the production process of mineral feed additives in which a product supplies microelements in highly bioavailable form. Enrichment of natural biomass of edible microalgae with microelement metal ions, which supply microelements of feeding significance in livestock diet, is considered in term of sustainable production. Approach: Production of microalgae-derived products as mineral feed additives requires elaboration of the processes for cultivation of alga, enrichment process and afterwards recovery of the enriched biomass from the solution to obtain liquid free of cells that could be reused in the next process. In this study membrane bioreactor was considered as a method for separation, both in photobioreactor (growth of microorganism as well as in the enrichment process. Results: Effort involved in thermal and chemical separation techniques is higher than that in mechanical techniques. Membrane bioreactors which are usually applied to treat wastewater, both industrial and domestic. This study discussed method to separate a valuable biomass of enriched microalgae and reuse the solution with residual metal ions that can be used once again in the subsequent biosorption process. Conclusion/Recommendation: Taking into consideration care about the environment it is better to apply membrane modules in the production process in terms of sustainable production. The proposed solution assumed the application of membrane modules as a separation step after enrichment process and biomass recovery.

  13. Biological Activity and Nutritional Properties of Processed Onion Products

    OpenAIRE

    Rolán Marín, María Eduvigis

    2009-01-01

    The first part of the PhD Thesis aimed to evaluate in vitro effects of food processing and preservation technologies on onion nutritional and technological properties. The first in vitro study analyzed ‘Figueres’ and ‘Recas’ onion by-products (juices, pastes and bagasses) stabilized by sterilization, pasteurization, and freezing technologies. Results demonstrated that processing ‘Recas’ onion wastes to obtain onion pastes and the subsequent stabilization with pasteurization trigge...

  14. Exploiting Graphics Processing Units for Computational Biology and Bioinformatics

    OpenAIRE

    Payne, Joshua L.; Nicholas A. Sinnott-Armstrong; Jason H Moore

    2010-01-01

    Advances in the video gaming industry have led to the production of low-cost, high-performance graphics processing units (GPUs) that possess more memory bandwidth and computational capability than central processing units (CPUs), the standard workhorses of scientific computing. With the recent release of general-purpose GPUs and Nvidia's GPU programming language, CUDA, graphics engines are being adopted widely in scientific computing applications, particularly in the fields of computational b...

  15. The Creation of a French Basic Nuclear Installation - Description of the Regulatory Process - 13293

    International Nuclear Information System (INIS)

    CEA is a French government-funded technological research organization. It has to build a medium-level waste interim storage facility because the geological repository will not be available until 2025. This interim storage facility, called DIADEM, has to be available in 2017. These wastes are coming from the research facilities for spent fuel reprocessing and the dismantling of the most radioactive parts of nuclear facilities. The CEA handles the waste management by inventorying the needs and updating them regularly. The conception of the facility is mainly based on this inventory. It provides quantity and characteristics of wastes and it gives the production schedule until 2035. Beyond mass and volume, main characteristics of these radioactive wastes are chemical nature, radioisotopes, radioactivity, radiation dose, the heat emitted, corrosive or explosive gas production, etc. These characteristics provide information to study the repository safety. DIADEM mainly consists of a concrete cell, isolated from the outside, wherein stainless steel welded containers are stored, stacked in a vertical position in the racks. DIADEM is scheduled to store three types of 8 mm-thick, stainless steel cylindrical containers with an outside diameter 498 mm and height from 620 to 2120 mm. DIADEM will be a basic nuclear installation (INB in French) because of overall activity of radioactive substances stored. The creation of a French basic nuclear installation is subject to authorization according to the French law No. 2006-686 of 13 June 2006 on Transparency and Security in the Nuclear Field. The authorization takes into account the technical and financial capacities of the licensee which must allow him to conduct his project in compliance with these interests, especially to cover the costs of decommissioning the installation and conduct remediation work, and to monitor and maintain its location site or, for radioactive waste disposal installations, to cover the definitive shut

  16. The Creation of a French Basic Nuclear Installation - Description of the Regulatory Process - 13293

    Energy Technology Data Exchange (ETDEWEB)

    Mahe, Carole [CEA Marcoule - BP17171 - 30207 Bagnols-Sur-Ceze (France); Leroy, Christine [CEA Cadarache - 13108 Saint Paul-Lez-Durance (France)

    2013-07-01

    CEA is a French government-funded technological research organization. It has to build a medium-level waste interim storage facility because the geological repository will not be available until 2025. This interim storage facility, called DIADEM, has to be available in 2017. These wastes are coming from the research facilities for spent fuel reprocessing and the dismantling of the most radioactive parts of nuclear facilities. The CEA handles the waste management by inventorying the needs and updating them regularly. The conception of the facility is mainly based on this inventory. It provides quantity and characteristics of wastes and it gives the production schedule until 2035. Beyond mass and volume, main characteristics of these radioactive wastes are chemical nature, radioisotopes, radioactivity, radiation dose, the heat emitted, corrosive or explosive gas production, etc. These characteristics provide information to study the repository safety. DIADEM mainly consists of a concrete cell, isolated from the outside, wherein stainless steel welded containers are stored, stacked in a vertical position in the racks. DIADEM is scheduled to store three types of 8 mm-thick, stainless steel cylindrical containers with an outside diameter 498 mm and height from 620 to 2120 mm. DIADEM will be a basic nuclear installation (INB in French) because of overall activity of radioactive substances stored. The creation of a French basic nuclear installation is subject to authorization according to the French law No. 2006-686 of 13 June 2006 on Transparency and Security in the Nuclear Field. The authorization takes into account the technical and financial capacities of the licensee which must allow him to conduct his project in compliance with these interests, especially to cover the costs of decommissioning the installation and conduct remediation work, and to monitor and maintain its location site or, for radioactive waste disposal installations, to cover the definitive shut

  17. Towards a New Approach of the Economic Intelligence Process: Basic Concepts, Analysis Methods and Informational Tools

    Directory of Open Access Journals (Sweden)

    Sorin Briciu

    2009-04-01

    Full Text Available One of the obvious trends in current business environment is the increased competition. In this context, organizations are becoming more and more aware of the importance of knowledge as a key factor in obtaining competitive advantage. A possible solution in knowledge management is Economic Intelligence (EI that involves the collection, evaluation, processing, analysis, and dissemination of economic data (about products, clients, competitors, etc. inside organizations. The availability of massive quantities of data correlated with advances in information and communication technology allowing for the filtering and processing of these data provide new tools for the production of economic intelligence.The research is focused on innovative aspects of economic intelligence process (models of analysis, activities, methods and informational tools and is providing practical guidelines for initiating this process. In this paper, we try: (a to contribute to a coherent view on economic intelligence process (approaches, stages, fields of application; b to describe the most important models of analysis related to this process; c to analyze the activities, methods and tools associated with each stage of an EI process.

  18. Method of refusals for technological preparation of group processing of basic holes

    Science.gov (United States)

    Tatarkin, E. Y.; Firsov, A. M.; Ovcharenko, A. G.; Kalistru, V. A.

    2016-04-01

    Analysis of the group stages of the preparation process for the body parts has shown that the existing methods of design does not account a number of factors that give rise to unacceptable deviations (potential failure) the output process parameters. Algorithm design of group process with the use of methods of “Analysis of the types and consequences of failure” and design search is proposed. This allows the design phase to identify potential failures, to develop measures to prevent such failures and to provide the required output parameters.

  19. Sex Differences in the Development of Brain Mechanisms for Processing Biological Motion

    OpenAIRE

    Anderson, L.C.; Bolling, D. Z.; Schelinski, S.; Coffman, M.C.; Pelphrey, K.A.; Kaiser, M.D.

    2013-01-01

    Disorders related to social functioning including autism and schizophrenia differ drastically in incidence and severity between males and females. Little is known about the neural systems underlying these sex-linked differences in risk and resiliency. Using functional magnetic resonance imaging and a task involving the visual perception of point-light displays of coherent and scrambled biological motion, we discovered sex differences in the development of neural systems for basic social perce...

  20. 3D finite elements method (FEM) Analysis of basic process parameters in rotary piercing mill

    OpenAIRE

    Z. Pater; J. Bartnicki; Kazanecki, J.

    2012-01-01

    In this paper 3D FEM analysis of process parameters and its infl uence in rotary piercing mill is presented. The FEM analyze of the rotary piercing process was made under the conditions of 3D state of strain with taking into consideration the thermal phenomena. The calculations were made with application of different rolls’ skew angles and different plug designs. In the result, progression of shapes, temperature and distributions of stress and strain were characterized. The numerical results ...

  1. Reactome: a database of reactions, pathways and biological processes.

    Science.gov (United States)

    Croft, David; O'Kelly, Gavin; Wu, Guanming; Haw, Robin; Gillespie, Marc; Matthews, Lisa; Caudy, Michael; Garapati, Phani; Gopinath, Gopal; Jassal, Bijay; Jupe, Steven; Kalatskaya, Irina; Mahajan, Shahana; May, Bruce; Ndegwa, Nelson; Schmidt, Esther; Shamovsky, Veronica; Yung, Christina; Birney, Ewan; Hermjakob, Henning; D'Eustachio, Peter; Stein, Lincoln

    2011-01-01

    Reactome (http://www.reactome.org) is a collaboration among groups at the Ontario Institute for Cancer Research, Cold Spring Harbor Laboratory, New York University School of Medicine and The European Bioinformatics Institute, to develop an open source curated bioinformatics database of human pathways and reactions. Recently, we developed a new web site with improved tools for pathway browsing and data analysis. The Pathway Browser is an Systems Biology Graphical Notation (SBGN)-based visualization system that supports zooming, scrolling and event highlighting. It exploits PSIQUIC web services to overlay our curated pathways with molecular interaction data from the Reactome Functional Interaction Network and external interaction databases such as IntAct, BioGRID, ChEMBL, iRefIndex, MINT and STRING. Our Pathway and Expression Analysis tools enable ID mapping, pathway assignment and overrepresentation analysis of user-supplied data sets. To support pathway annotation and analysis in other species, we continue to make orthology-based inferences of pathways in non-human species, applying Ensembl Compara to identify orthologs of curated human proteins in each of 20 other species. The resulting inferred pathway sets can be browsed and analyzed with our Species Comparison tool. Collaborations are also underway to create manually curated data sets on the Reactome framework for chicken, Drosophila and rice. PMID:21067998

  2. Basic research on separation control of long life nuclides in fuel reprocessing processes

    Energy Technology Data Exchange (ETDEWEB)

    Suzuki, Atsuyuki; Usami, Go [Tokyo Univ. (Japan). Faculty of Engineering; Maeda, Mitsuru; Fujine, Sachio; Uchiyama, Gunzo; Kihara, Takehiro; Asakura, Toshihide; Hotoku, Shinobu

    1996-01-01

    The behavior of technetium (Tc) in nuclear fuel reprocessing processes has become the subject to be elucidated in the transition to distribution process by coextraction and the catalytic action in distribution process. In order to forecast or control the behavior of Tc in reprocessing processes, it is necessary to understand that at which valence Tc exists stably in respective processes. Tc is stable at 7 valence in nitric acid solution expected in reprocessing. In this research, the reaction speed of the oxidation and reduction reactions of rhenium (Re) which simulates Tc was measured by laser Raman spectroscopy which can do high speed analysis of valence. The experimental method is explained. The Raman spectra of Re in the experimental system of this research were measured in perchloric acid solution and nitric acid solution, and compared with the values in literatures. As the result, the validity of this research was assured. It was confirmed that Re(7) was not reduced by sulfamic acid and ascorbic acid. Re(7) was reduced by thiocyanic acid once, but was oxidized again by the reaction of thiocyanic acid and nitric acid. (K.I.)

  3. Trickling Filters. Student Manual. Biological Treatment Process Control.

    Science.gov (United States)

    Richwine, Reynold D.

    The textual material for a unit on trickling filters is presented in this student manual. Topic areas discussed include: (1) trickling filter process components (preliminary treatment, media, underdrain system, distribution system, ventilation, and secondary clarifier); (2) operational modes (standard rate filters, high rate filters, roughing…

  4. Anaerobic Digestion. Student Manual. Biological Treatment Process Control.

    Science.gov (United States)

    Carnegie, John W., Ed.

    This student manual contains the textual material for a four-lesson unit on anaerobic digestion control. Areas addressed include: (1) anaerobic sludge digestion (considering the nature of raw sludge, purposes of anaerobic digestion, the results of digestion, types of equipment, and other topics); (2) digester process control (considering feeding…

  5. 3D finite elements method (FEM Analysis of basic process parameters in rotary piercing mill

    Directory of Open Access Journals (Sweden)

    Z. Pater

    2012-10-01

    Full Text Available In this paper 3D FEM analysis of process parameters and its infl uence in rotary piercing mill is presented. The FEM analyze of the rotary piercing process was made under the conditions of 3D state of strain with taking into consideration the thermal phenomena. The calculations were made with application of different rolls’ skew angles and different plug designs. In the result, progression of shapes, temperature and distributions of stress and strain were characterized. The numerical results of calculations were compared with results of stand test with use of 100Cr6 steel. The comparisons of numerical and experimental tests confirm good agreement between obtained results.

  6. Quantum biological information theory

    CERN Document Server

    Djordjevic, Ivan B

    2016-01-01

    This book is a self-contained, tutorial-based introduction to quantum information theory and quantum biology. It serves as a single-source reference to the topic for researchers in bioengineering, communications engineering, electrical engineering, applied mathematics, biology, computer science, and physics. The book provides all the essential principles of the quantum biological information theory required to describe the quantum information transfer from DNA to proteins, the sources of genetic noise and genetic errors as well as their effects. Integrates quantum information and quantum biology concepts; Assumes only knowledge of basic concepts of vector algebra at undergraduate level; Provides a thorough introduction to basic concepts of quantum information processing, quantum information theory, and quantum biology; Includes in-depth discussion of the quantum biological channel modelling, quantum biological channel capacity calculation, quantum models of aging, quantum models of evolution, quantum models o...

  7. Using Forensic Psychology to Teach Basic Psychological Processes: Eyewitness Memory and Lie Detection

    Science.gov (United States)

    Costanzo, Mark A.

    2013-01-01

    Teachers can incorporate topics in forensic psychology into lower level courses to increase student interest and to show how psychological processes influence outcomes in high-stakes applied contexts. One such topic is eyewitness identification, which teachers can use to show how stress affects memory and how memories can become distorted during…

  8. State Estimation for a Biological Phosphorus Removal Process using an Asymptotic Observer

    DEFF Research Database (Denmark)

    Larose, Claude Alain; Jørgensen, Sten Bay

    2001-01-01

    This study investigated the use of an asymptotic observer for state estimation in a continuous biological phosphorus removal process. The estimated states are the concentration of heterotrophic, autotrophic, and phosphorus accumulating organisms, polyphosphate, glycogen and PHA. The reaction scheme...

  9. Biological removal of metal ions from aqueous process streams

    International Nuclear Information System (INIS)

    Aqueous waste streams from nuclear fuel processing operations may contain trace quantities of heavy metals such as uranium. Conventional chemical and physical treatment may be ineffective or very expensive when uranium concentrations in the range of 10 to 100 g/m3 must be reduced to 1 g/m3 or less. The ability of some microorganisms to adsorb or complex dissolved heavy metals offers an alternative treatment method. Uranium uptake by Saccharomyces cerevisiae NRRL Y-2574 and a strain of Pseudomonas aeruginosa was examined to identify factors which might affect a process for the removal of uranium from wastewater streams. At uranium concentrations in the range of 10 to 500 g/m3, where the binding capacity of the biomass was not exceeded, temperature, pH, and initial uranium concentration were found to influence the rate of uranium uptake, but not the soluble uranium concentration at equilibrium. 6 figs

  10. Biological Treatment of tannery wastewater using activated sludge process

    International Nuclear Information System (INIS)

    A study was conducted to evaluate the feasibility of Activated Sludge Process (ASP) for the treatment of tannery wastewater and to develop a simple design criteria under local conditions. A bench scale model comprising of an aeration tank and final clarifier was used for this purpose. The model was operated continuously for 267 days. Settled tannery wastewater was used as influent to the aeration tank. Five days Biochemical Oxygen Demand (BOD5) and Chemical Oxygen Demand (COD) of the influent and effluent were measured to find process efficiency at various mixed liquor volatile suspended solids (MLVSS) and hydraulic detention time. The results of the study demonstrated that an efficiency of above 90% and 80% for BOD5 and COD, respectively could be obtained if the ASP is operated at an MLVSS concentration of 3500 mg/L keeping an aeration time of 12 hours. (author)

  11. Treatment of Dye Effluent by Electrochemical and Biological Processes

    OpenAIRE

    Sirasanaganbla Udya Bhanu; Saravanan Arun Kumar; Anand Kuber Parande; Balakrishnan Ramesh Babu

    2011-01-01

    Textile dye wastewater is well known to contain strong colour, high pH, temperature, Chemical Oxygen Demand (COD) and biodegradable materials. The electrochemical treatment of wastewater is considered as one of the advanced oxidation processes, potentially a powerful method of pollution control, offering high removal efficiencies the removal of colour of methyl red azo dye is a challenge in textile industry. The following methods have been adopted for the treatment of real textile wastewater:...

  12. Kinetics of quasi-isoenergetic transition processes in biological macromolecules

    OpenAIRE

    Petrov, E. G.; Teslenko, V. I.

    2012-01-01

    A master equation describing the evolution of averaged molecular state occupancies in molecular systems where alternation of molecular energy levels is caused by discrete dichotomous and trichotomous stochastic fields, is derived. This study is focused on the kinetics of quasi-isoenergetic transition processes in the presence of moderately high frequency stochastic field. A novel physical mechanism for temperature-independent transitions in flexible molecular systems is proposed. This mechani...

  13. Low cost materials of construction for biological processes: Proceedings

    Energy Technology Data Exchange (ETDEWEB)

    1993-05-13

    The workshop was held, May 1993 in conjunction with the 15th Symposium on Biotechnology for Fuels and Chemicals. The purpose of this workshop was to present information on the biomass to ethanol process in the context of materials selection and through presentation and discussion, identify promising avenues for future research. Six technical presentations were grouped into two sessions: process assessment and technology assessment. In the process assessment session, the group felt that the pretreatment area would require the most extensive materials research due the complex chemical, physical and thermal environment. Discussion centered around the possibility of metals being leached into the process stream and their effect on the fermentation mechanics. Linings were a strong option for pretreatment assuming the economics were favorable. Fermentation was considered an important area for research also, due to the unique complex of compounds and dual phases present. Erosion in feedstock handling equipment was identified as a minor concern. In the technology assessment session, methodologies in corrosion analysis were presented in addition to an overview of current coatings/linings technology. Widely practiced testing strategies, including ASTM methods, as well as novel procedures for micro-analysis of corrosion were discussed. Various coatings and linings, including polymers and ceramics, were introduced. The prevailing recommendations for testing included keeping the testing simple until the problem warranted a more detailed approach and developing standardized testing procedures to ensure the data was reproducible and applicable. The need to evaluate currently available materials such as coatings/linings, carbon/stainless steels, or fiberglass reinforced plastic was emphasized. It was agreed that economic evaluation of each material candidate must be an integral part of any research plan.

  14. Biological processing in oscillatory baffled reactors: operation, advantages and potential.

    Science.gov (United States)

    Abbott, M S R; Harvey, A P; Perez, G Valente; Theodorou, M K

    2013-02-01

    The development of efficient and commercially viable bioprocesses is essential for reducing the need for fossil-derived products. Increasingly, pharmaceuticals, fuel, health products and precursor compounds for plastics are being synthesized using bioprocessing routes as opposed to more traditional chemical technologies. Production vessels or reactors are required for synthesis of crude product before downstream processing for extraction and purification. Reactors are operated either in discrete batches or, preferably, continuously in order to reduce waste, cost and energy. This review describes the oscillatory baffled reactor (OBR), which, generally, has a niche application in performing 'long' processes in plug flow conditions, and so should be suitable for various bioprocesses. We report findings to suggest that OBRs could increase reaction rates for specific bioprocesses owing to low shear, good global mixing and enhanced mass transfer compared with conventional reactors. By maintaining geometrical and dynamic conditions, the technology has been proved to be easily scaled up and operated continuously, allowing laboratory-scale results to be easily transferred to industrial-sized processes. This is the first comprehensive review of bioprocessing using OBRs. The barriers facing industrial adoption of the technology are discussed alongside some suggested strategies to overcome these barriers. OBR technology could prove to be a major aid in the development of commercially viable and sustainable bioprocesses, essential for moving towards a greener future. PMID:24427509

  15. Characteristics of biological aerosols in dairy processing plants.

    Science.gov (United States)

    Kang, Y J; Frank, J F

    1990-03-01

    The viable aerosol in dairy processing plant environments was characterized by using an Andersen six-stage sieve sampler and a Reuter centrifugal sampler. Artificially introduced Serratia marcescens were detected in the air during drain flooding and after rinsing the floor with a pressured water hose, thus illustrating the ability of a specific microorganism to be disseminated from drains and wet surfaces via physical disruption activities often observed in food plants. Once a high concentration of wet viable aerosol was generated, it took 40 or more min to return to the background level in the absence of forced ventilation or other activity. The greatest reduction in viable particles occurred during the first 10 min. Estimated mean aerosol particle sizes were decreased from approximately 4.6 to 3.2 mu with time lapse. The estimated mean aerosol particle sizes from actual dairy processing plant environments ranged from approximately 4.3 to 5.3 mu. In addition, a more heavily contaminated dairy processing environment contained larger aerosol particles. These results indicate that the RCS sampler will often overestimate the true aerosol concentration in highly contaminated air, because mean particle sizes are over 4 mu in diameter. PMID:2187913

  16. The expansion of a plasma into a vacuum - Basic phenomena and processes and applications to space plasma physics

    Science.gov (United States)

    Wright, K. H., Jr.; Stone, N. H.; Samir, U.

    1983-01-01

    In this review attention is called to basic phenomena and physical processes involved in the expansion of a plasma into a vacuum, or the expansion of a plasma into a more tenuous plasma, in particular the fact that upon the expansion, ions are accelerated and reach energies well above their thermal energy. Also, in the process of the expansion a rarefaction wave propagates into the ambient plasma, an ion front moves into the expansion volume, and discontinuities in plasma parameters occur. The physical processes which cause the above phenomena are discussed, and their possible application is suggested for the case of the distribution of ions and electrons (hence plasma potential and electric fields) in the wake region behind artificial and natural obstacles moving supersonically in a rarefied space plasma. To illustrate this, some in situ results are reexamined. Directions for future work in this area via the utilization of the Space Shuttle and laboratory work are also mentioned.

  17. Basic rhythm of myoelectric activities of sphcter of Oddi and its biological significance%Oddi括约肌肌电活动的基本方式

    Institute of Scientific and Technical Information of China (English)

    李虎城; 董家鸿; 陈飞; 邹一平; 李为民

    2010-01-01

    Objective To observe the basic rhythm of myoelectrie activities of sphcter of Oddi (SO)and explore its biological significance.Methods Healthy adult rabbits(n=32)were randomized into 4 groups with 8 in each.The first group was for recording of myoelectric activities of SO after keeping fast for 18 hours.The second group was manipulated to observe the myoelectric activities of SO after food infusion through the stoma in stomach.The myoelectric activities of SO in the third group were monitored after the classical Nardi test was performed on these rabbits.The fourth group was used to observe the myoelectric activities of SO after the cholinergic receptors had been blocked.Using the double claw metal electrodes which were put into SO and duodenum through the plasma membrance,the myoelectric signal were recorded with RM6240 multi-channel physiologic recording and signal processing system and non-stop recording was conducted for 120-150 mins.Results 1)Spike Potentials of SO with the frequency was observed in rabbits that had been fasting.2)Myoelectronic activity of SO was observed in rabbits infused with 50 ml milk through stoma.3)After the administration of 1 mg morphine and 1 mg neostigmine i.v,the myoelectric activities of SO were noted as long-lasting persistent MASO.4)Administration of anisodamine 1 mg(i.v.)in the empty abdomen group dismissed SPSO and MASO.This state lasted for 120 min before SPSO gradually reconverted to the state of empty abdomen.Conclusion There are four patterns of myoelectric activities of SO,i.e,tensional waves under empty abdomen indicating a state in which the SO kept a basic tension level.Peristaltic waves under intake of food.Spastic waves under the stimulation of drugs and relaxant waves under the post-ganglionic block of cholinergic receptors were observed in the present study.Correspondingly,their mechanic locomotion is inferred as the basic tensional state to faciliate the deposition and condensation of bile,the peristalsis for the

  18. A strategy for xenobiotic removal using photocatalytic treatment, microbial degradation or integrated photocatalytic-biological process

    OpenAIRE

    Lapertot, Miléna

    2006-01-01

    According to the limited natural resources and due to the risks of anthropogenic pollution, it appears necessary to react efficiently in order to remove existing contaminations and avoid the creation of new ones. Therefore, the purpose of this thesis is to propose a sustainable strategy for treating problematic pollutants with the most adequate process. First, an overview of the different treatment processes has been given. In particular, biological, photocatalytic and integrated biological-p...

  19. A strategy for xenobiotic removal using photocatalytic treatment, microbial degradation or integrated photocatalytic-biological process

    OpenAIRE

    Lapertot, Miléna; Pulgarin, César

    2007-01-01

    According to the limited natural resources and due to the risks of anthropogenic pollution, it appears necessary to react efficiently in order to remove existing contaminations and avoid the creation of new ones. Therefore, the purpose of this thesis is to propose a sustainable strategy for treating problematic pollutants with the most adequate process. First, an overview of the different treatment processes has been given. In particular, biological, photocatalytic and integrated biological-p...

  20. Development and application of a new software tool for the basic design of flue gas cleaning processes

    Energy Technology Data Exchange (ETDEWEB)

    Schausberger, P.; Friedl, A. [Vienna Univ. of Technology, Inst. of Chemical Engineering, Group of Thermal Process Engineering and Simulation, Vienna (Austria); Wieland, A.; Reissner, H. [AE and E Austrian Energy and Environment AG, Flue Gas Cleaning Div., Raaba/Graz (Austria)

    2004-07-01

    The development of a new software tool designed for improvement of the basic engineering of flue-gas cleaning processes and its specific application is presented. The tool is based on the commercially available simulation tool IPSEpro originating from the field of power engineering. Here, a modelling environment enables the enhancement of the existing content: substances, streams and unit operations to be included are structured in an object-oriented manner, the according steady mass and heat balances are setup to yield a system of equations to be solved simultaneously. (orig.)

  1. UV/VUV high sensitivity absorption spectroscopy for diagnosing lighting and processing plasmas and for basic data

    International Nuclear Information System (INIS)

    High sensitivity absorption spectroscopy involves the use of modern diode and CCD (charge coupled device) detector arrays to observe fractional absorptions of ultraviolet (UV) and vacuum ultraviolet (VUV) radiation as small as 0.00001. Stable arc lamps provide a continuum in some experiments, but experiments at very high spectral resolution or at VUV wavelengths require the greater spectral radiance of a synchrotron. Absolute densities of excited atoms, atomic ions, and molecular radicals are measured in both processing and lighting plasmas. Basic spectroscopic data needed for the analysis of astrophysical observations from the Hubble Space Telescope are measured using absorption of Fe+ in a hollow cathode discharge. copyright 1996 American Institute of Physics

  2. Gasification processes old and new: a basic review of the major technologies

    Energy Technology Data Exchange (ETDEWEB)

    Breault, R. W. [NETL-US DOE, PO Box 880, Morgantown, WV 26507 (United States)

    2010-07-01

    This paper has been put together to provide a single source document that not only reviews the historical development of gasification but also compares the process to combustion. It also provides a short discussion on integrated gasification and combined cycle processes. The major focus of the paper is to describe the twelve major gasifiers being marketed today. Some of these are already fully developed while others are in various stages of development. The hydrodynamics and kinetics of each are reviewed along with the most likely gas composition from each of the technologies when using a variety of fuels under different conditions from air blown to oxygen blown and atmospheric pressure to several atmospheres. (author)

  3. 生物反硝化除磷技术研究进展%Advances in Research of Phosphorus Removal Technology for Biological Denitrification Processes

    Institute of Scientific and Technical Information of China (English)

    姜鸣; 张静慧; 宫飞蓬; 周军; 甘一萍; 李军

    2011-01-01

    综述了反硝化除磷技术的基本理论,各种反硝化除磷工艺的特点,反硝化除磷微生物学的研究情况以及对其机理与数学模型研究的发展.%The basic theories of biological denitrifying phosphorus removal, characteristic of various process, the research status of biological denitrifying phosphorus removal and so on were introduced.

  4. Towards a New Approach of the Economic Intelligence Process: Basic Concepts, Analysis Methods and Informational Tools

    OpenAIRE

    Sorin Briciu; Marinela Vrîncianu; Florin Mihai

    2009-01-01

    One of the obvious trends in current business environment is the increased competition. In this context, organizations are becoming more and more aware of the importance of knowledge as a key factor in obtaining competitive advantage. A possible solution in knowledge management is Economic Intelligence (EI) that involves the collection, evaluation, processing, analysis, and dissemination of economic data (about products, clients, competitors, etc.) inside organizations. The ...

  5. Process for separating actinide ions from aquaeous basic solutions containing carbonates

    International Nuclear Information System (INIS)

    The waste liquid is subjected to the following stages of the process: Treatment with concentrated phosphoric acid. Decomposition of the phosphoric acid ester H3PO4 adduct compounds formed in the first stage. Saponification of the phosphoric acid ester and draining off a saponification product. Cooling the drained off saponification product and separation of the organic phase formed during cooling of the aqueous phase. Burning the organic phase. Returning the aqueous phase to the saponification stage and solidifying the aqueous phases or residues containing the impurities. (orig./PW)

  6. Effect of Process-Oriented Guided-Inquiry Learning on Non-majors Biology Students' Understanding of Biological Classification

    Science.gov (United States)

    Wozniak, Breann M.

    The purpose of this study was to examine the effect of process-oriented guided-inquiry learning (POGIL) on non-majors college biology students' understanding of biological classification. This study addressed an area of science instruction, POGIL in the non-majors college biology laboratory, which has yet to be qualitatively and quantitatively researched. A concurrent triangulation mixed methods approach was used. Students' understanding of biological classification was measured in two areas: scores on pre and posttests (consisting of 11 multiple choice questions), and conceptions of classification as elicited in pre and post interviews and instructor reflections. Participants were Minnesota State University, Mankato students enrolled in BIOL 100 Summer Session. One section was taught with the traditional curriculum (n = 6) and the other section in the POGIL curriculum (n = 10) developed by the researcher. Three students from each section were selected to take part in pre and post interviews. There were no significant differences within each teaching method (p vocabulary terms, physical characteristics, and types of evidence used to classify. Both groups extended their understanding, but only POGIL students could explain how molecular evidence is used in classification. 2) The challenges preventing students from understanding classification were: familiar animal categories and aquatic habitats, unfamiliar organisms, combining and subdividing initial groupings, and the hierarchical nature of classification. The POGIL students were the only group to surpass these challenges after the teaching intervention. This study shows that POGIL is an effective technique at eliciting students' misconceptions, and addressing these misconceptions, leading to an increase in student understanding of biological classification.

  7. Kinetics of quasi-isoenergetic transition processes in biological macromolecules

    International Nuclear Information System (INIS)

    A master equation describing the evolution of averaged molecular state occupancies in molecular systems where alternation of molecular energy levels is caused by discrete dichotomous and trichotomous stochastic fields, is derived. This study is focused on the kinetics of quasi-isoenergetic transition processes in the presence of moderately high frequency stochastic field. A novel physical mechanism for temperature-independent transitions in flexible molecular systems is proposed. This mechanism becomes effective when the conformation transitions between quasi-isoenergetic molecular states take place. At room temperatures, stochastic broadening of molecular energy levels predominates the energy of low-frequency vibrations accompanying the transition. This leads to a cancellation of the temperature dependence in the stochastically averaged rate constants. As examples, physical interpretations of the temperature-independent onset of P2X3 receptor desensitization in neuronal membranes, as well as degradation of PER2 protein in embrionic fibroblasts, are provided.

  8. Kinetics of quasi-isoenergetic transition processes in biological macromolecules

    CERN Document Server

    ,

    2012-01-01

    A master equation describing the evolution of averaged molecular state occupancies in molecular systems where alternation of molecular energy levels is caused by discrete dichotomous and trichotomous stochastic fields, is derived. This study is focused on the kinetics of quasi-isoenergetic transition processes in the presence of moderately high frequency stochastic field. A novel physical mechanism for temperature-independent transitions in flexible molecular systems is proposed. This mechanism becomes effective when the conformation transitions between quasi-isoenergetic molecular states take place. At room temperatures, stochastic broadening of molecular energy levels predominates the energy of low frequency vibrations accompanying the transition. This leads to a cancellation of the temperature dependence in the stochastically averaged rate constants. As examples, physical interpretations of the temperature-independent onset of P2X$_3$ receptor desensitization in neuronal membranes, as well as degradation o...

  9. Object extraction as a basic process for content-based image retrieval (CBIR) system

    Science.gov (United States)

    Jaworska, T.

    2007-12-01

    This article describes the way in which image is prepared for content-based image retrieval system. Automated image extraction is crucial; especially, if we take into consideration the fact that the feature selection is still a task performed by human domain experts and represents a major stumbling block in the process of creating fully autonomous CBIR systems. Our CBIR system is dedicated to support estate agents. In the database, there are images of houses and bungalows. We put all our efforts into extracting elements from an image and finding their characteristic features in the unsupervised way. Hence, the paper presents segmentation algorithm based on a pixel colour in RGB colour space. Next, it presents the method of object extraction applied to obtain separate objects prepared for the process of introducing them into database and further recognition. Moreover, we present a novel method of texture identification which is based on wavelet transformation. Due to the fact that the majority of texture is geometrical (such as bricks and tiles) we have used the Haar wavelet. After a set of low-level features for all objects is computed, the database is stored with these features.

  10. Curricular contribution of the subject Health and Philosophy to the educational process of Basic General Doctors.

    Directory of Open Access Journals (Sweden)

    Blanca Rosa Garcés Garcés

    2005-12-01

    Full Text Available Background: The curriculum of Philosophy and Health discipline is an important tool in the formative process of General Comprehensive Doctors if the educative and instructive goals, as well as the content of each subject are linked to the educative work necessities and the future fields of Health Professionals. Objectives: To determine the curricular contribution of this discipline to the formative process of General Comprehensive Doctors regarding human values development, skills and preparation for their future working fields during courses 2000-2001, 2001-2002 and 2003-2004. Methods: An anonym survey was performed to students, in the conformation of the final report different methods were used: analysis, synthesis, historical-logical method. Results: Values such responsibility, discipline, justice, humanism, solidarity, honesty, anti-imperialism, equality and creativity were more popular among students and the least popular were simplicity and unconditional behavior. Conclusion: This experience allowed us to verify that this discipline has contributed to human values development of first year students and that they acknowledge their professor's work.

  11. Basical characteristics of fluid geologic process of interlayer oxidation zone sandstone-typeuranium deposit

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    This paper reveals the physicochemical properties such as component, formulation, genesis, tem- perature, pH, Eh, salinity and pressure of all main alteration fluid of interlayer oxidation zone sand- stone-type uranium deposits after studying the geologic process and geochemistry of internal typical sandstone-type uranium deposits such as Shihongtan deposit in the Turpan-Hami basin, 512 deposit in the Yili basin, Dongsheng deposit in the Ordos basin. The composition of fluid can be divided into two parts based on the analysis of inclusion: one can be affirmed as atmospheric water with ordinary temperature epigenesist according to the character of hydrogen and oxygen isotope of inclusion, the other is natural gas containing gaseous hydrocarbon like CH4, and CO2 as well as a little H2S, CO, H2, N2 and so on, it always contains a small quantity of hydrocarbon liquid in petroliferous basins. The fluid property of oxidation alteration zone is always oxidation alkaline, and neutrality or weak acid-weak alkaline and reducibility during the metallizing process, but at secondary reduction or deoxidization zone it becomes strong reduction alkaline. Oxygenic groundwater in the fluid is the activate and mig- ratory medium of uranium element, but the gaseous hydrocarbon like CH4 as well as H2, H2S, CO from natural gas is the important sedimentary reducer of uranium mineral; the transformation of pH,Eh in fluid environment is the main reason for the formation of uranium metallization.

  12. A basic experimental study of ultrasonic assisted hot embossing process for rapid fabrication of microlens arrays

    Science.gov (United States)

    Chang, Chih-Yuan; Yu, Che-Hao

    2015-02-01

    This paper reports a highly effective technique for rapid fabrication of microlens arrays based on an ultrasonic assisted hot embossing process. In this method, a thin stainless steel mold with micro-holes array is fabricated by a photolithography and wet etching process. Then, the thin stainless steel mold with micro-holes array is placed on top of a plastic substrate (PMMA plate) and the stack is placed in an ultrasonic vibration embossing machine. During ultrasonic assisted hot embossing operation, the surface of the stainless steel mold with micro-holes array presses against the thermoplastic PMMA substrate. Under proper ultrasonic vibration time, embossing pressure and hold time, the softened polymer will just partially fill the circular holes and due to surface tension, form a convex lens surface. After the stainless steel mold is removed, the microlens array patterns on the surface of plastic substrate can be obtained. The total cycle time is less than 10 s. Finally, geometrical and optical properties of the fabricated plastic microlens arrays were measured and proved satisfactory. This technique shows great potential for fabricating microlens array on plastic substrates with high productivity and low cost.

  13. A basic experimental study of ultrasonic assisted hot embossing process for rapid fabrication of microlens arrays

    International Nuclear Information System (INIS)

    This paper reports a highly effective technique for rapid fabrication of microlens arrays based on an ultrasonic assisted hot embossing process. In this method, a thin stainless steel mold with micro-holes array is fabricated by a photolithography and wet etching process. Then, the thin stainless steel mold with micro-holes array is placed on top of a plastic substrate (PMMA plate) and the stack is placed in an ultrasonic vibration embossing machine. During ultrasonic assisted hot embossing operation, the surface of the stainless steel mold with micro-holes array presses against the thermoplastic PMMA substrate. Under proper ultrasonic vibration time, embossing pressure and hold time, the softened polymer will just partially fill the circular holes and due to surface tension, form a convex lens surface. After the stainless steel mold is removed, the microlens array patterns on the surface of plastic substrate can be obtained. The total cycle time is less than 10 s. Finally, geometrical and optical properties of the fabricated plastic microlens arrays were measured and proved satisfactory. This technique shows great potential for fabricating microlens array on plastic substrates with high productivity and low cost. (paper)

  14. Basic Evaluation of the Process of China's Industrial Modernization

    Institute of Scientific and Technical Information of China (English)

    JiaguiChen; QunhuiHuang

    2005-01-01

    As China will change from a large industrial power into a strong industrial power in the 21st century, the inevitable demand is for industrial modernization. This paper puts forward three criteria for judging the degree of realization of industrial modernization: industrial growth efficiency, industrial structure and industrial environment. Together with these, it constructs an indicator system and indices for evaluating the level of industrial modernization, and uses this indicator system to evaluate the level of China's industrial modernization at the tam of the century. The resulting comprehensive index of China's industrial modernization is 28. 72. This indicates that, through the rapid industrialization which has taken place over more than 20 years of reform and opening up, China has commenced its industrial modernization, which is now in the primary stage of development. The core of the strategy for further development should be to accelerate the process of industrial modernization.

  15. Bridging the gaps in systems biology

    OpenAIRE

    Marija Cvijovic; Joachim Almquist; Jonas Hagmar; Stefan Hohmann; Hans\\u2011Michael Kaltenbach; Edda Klipp; Marcus Krantz; Pedro Mendes; Sven Nelander; Jens Nielsen; Andrea Pagnani; Natasa Przulj; Andreas Raue; J\\xf6rg Stelling; Szymon Stoma

    2014-01-01

    International audience Systems biology aims at creating mathematical models, i.e., computational reconstructions of biological systems and processes that will result in a new level of understanding-the elucidation of the basic and presumably conserved "design" and "engineering" principles of biomolecular systems. Thus, systems biology will move biology from a phenomenological to a predictive science. Mathematical modeling of biological networks and processes has already greatly improved ou...

  16. The Renin-Angiotensin System Modulates Inflammatory Processes in Atherosclerosis: Evidence from Basic Research and Clinical Studies

    Directory of Open Access Journals (Sweden)

    Fabrizio Montecucco

    2009-01-01

    Full Text Available Recent evidence shows that the renin-angiotensin system is a crucial player in atherosclerotic processes. The regulation of arterial blood pressure was considered from its first description of the main mechanism involved. Vasoconstriction (mediated by angiotensin II and salt and water retention (mainly due to aldosterone were classically considered as pivotal proatherosclerotic activities. However, basic research and animal studies strongly support angiotensin II as a proinflammatory mediator, which directly induces atherosclerotic plaque development and heart remodeling. Furthermore, angiotensin II induces proatherosclerotic cytokine and chemokine secretion and increases endothelial dysfunction. Accordingly, the pharmacological inhibition of the renin-angiotensin system improves prognosis of patients with cardiovascular disease even in settings of normal baseline blood pressure. In the present review, we focused on angiotensin-convertingenzyme (ACE inhibitors, angiotensin II receptor blockers (ARBs, and renin inhibitors to update the direct activities of the renin-angiotensin system in inflammatory processes governing atherosclerosis.

  17. Advanced Small Rocket Chambers. Basic Program and Option 2: Fundamental Processes and Material Evaluation

    Science.gov (United States)

    Jassowski, Donald M.

    1993-01-01

    Propellants, chamber materials, and processes for fabrication of small high performance radiation cooled liquid rocket engines were evaluated to determine candidates for eventual demonstration in flight-type thrusters. Both storable and cryogenic propellant systems were considered. The storable propellant systems chosen for further study were nitrogen tetroxide oxidizer with either hydrazine or monomethylhydrazine as fuel. The cryogenic propellants chosen were oxygen with either hydrogen or methane as fuel. Chamber material candidates were chemical vapor deposition (CVD) rhenium protected from oxidation by CVD iridium for the chamber hot section, and film cooled wrought platinum-rhodium or regeneratively cooled stainless steel for the front end section exposed to partially reacted propellants. Laser diagnostics of the combustion products near the hot chamber surface and measurements at the surface layer were performed in a collaborative program at Sandia National Laboratories, Livermore, CA. The Material Sample Test Apparatus, a laboratory system to simulate the combustion environment in terms of gas and material temperature, composition, and pressure up to 6 Atm, was developed for these studies. Rocket engine simulator studies were conducted to evaluate the materials under simulated combustor flow conditions, in the diagnostic test chamber. These tests used the exhaust species measurement system, a device developed to monitor optically species composition and concentration in the chamber and exhaust by emission and absorption measurements.

  18. Removal of reactive blue 19 from wastewaters by physicochemical and biological processes - a review

    International Nuclear Information System (INIS)

    The developments for the removal of reactive blue 19 dye (RB 19) by various physicochemical methods such as sonolysis, photo catalysis, electrochemical, ozonolysis, adsorption, hydrolysis and biological methods like microbial degradation, bio sorption, chemical and biological reductive decolorisation has been presented. It was found that none of the individual physical and chemical technique can be used in wastewater treatment with good economics and high energy efficiency. For example, the application of adsorption method is restricted as adsorbent materials requires frequent regenerations; ozonolysis and photo catalysis processes can efficiently decolorize and degrade the dye but these face operational difficulties are not cost effective. Similarly the performance of biological treatment processes is required to enhance by developing efficient strains of bacteria, fungi. The comparison of physiochemical and biological treatment of RB 19 dye suggested that biological treatment of RB 19 dye is comparatively cost-effective process. However, the integrated approach can be used to decolorize and degrade the dye by combining both physicochemical and biological processes. (author)

  19. Present and perspective of enhanced biological phosphorus removal process; Seibutsugakuteki rin jokyoho no genjo to kadai

    Energy Technology Data Exchange (ETDEWEB)

    Nakamura, K. [National Inst. of Bioscience and Human-Technology, Tsukuba (Japan)

    1997-02-05

    Biological phosphorus removal process utilizing anaerobic and aerobic conditions, mechanism of phosphorus removal, and microbes relating to phosphorus removal are outlined, and future problems are discussed. By mixing waste water and sludge under anaerobic condition followed by treatment under aerobic condition, phosphorus content in sludge increases to enable biological phosphorus removal. More microbes with high polyphosphorus accumulating performance are acquired by the anaerobic/aerobic process than other microbes with the result of their preferential increase, and the process has high phosphorus removal characteristic than the general treatment process. Microbes relating to phosphorus removal, immobilization of polyphosphate accumulating microbes, and phosphorus acquiring and releasing characteristics of immobilized mycelium are discussed. Application of gel entrapped immobilized mycelium to phosphorus removal and problems in biological phosphorus removing methods are described. 18 refs., 12 figs.

  20. Proceedings Fourth Workshop on Membrane Computing and Biologically Inspired Process Calculi 2010

    CERN Document Server

    Ciobanu, Gabriel; 10.4204/EPTCS.40

    2010-01-01

    The 4th Workshop on Membrane Computing and Biologically Inspired Process Calculi (MeCBIC 2010) is organized in Jena as a satellite event of the Eleventh International Conference on Membrane Computing (CMC11). Biological membranes play a fundamental role in the complex reactions which take place in cells of living organisms. The importance of this role has been considered in two different types of formalisms introduced recently. Membrane systems were introduced as a class of distributed parallel computing devices inspired by the observation that any biological system is a complex hierarchical structure, with a flow of biochemical substances and information that underlies their functioning. The modeling and analysis of biological systems has also attracted considerable interest of the process algebra research community. Thus the notions of membranes and compartments have been explicitly represented in a family of calculi, such as ambients and brane calculi. A cross fertilization of these two research areas has ...

  1. Five-Year Wilkinson Microwave Anisotropy Probe Observations: Data Processing, Sky Maps, and Basic Results

    Science.gov (United States)

    Hinshaw, G.; Weiland, J. L.; Hill, R. S.; Odegard, N.; Larson, D.; Bennett, C. L.; Dunkley, J.; Gold, B.; Greason, M. R.; Jarosik, N.; Komatsu, E.; Nolta, M. R.; Page, L.; Spergel, D. N.; Wollack, E.; Halpern, M.; Kogut, A.; Limon, M.; Meyer, S. S.; Tucker, G. S.; Wright, E. L.

    2010-01-01

    We present new full-sky temperature and polarization maps in five frequency bands from 23 to 94 GHz, based on data from the first five years of the Wilkinson Microwave Anisotropy Probe (WMAP) sky survey. The new maps are consistent with previous maps and are more sensitive. The five-year maps incorporate several improvements in data processing made possible by the additional years of data and by a more complete analysis of the instrument calibration and in-flight beam response. We present several new tests for systematic errors in the polarization data and conclude that W-band polarization data is not yet suitable for cosmological studies, but we suggest directions for further study. We do find that Ka-band data is suitable for use; in conjunction with the additional years of data, the addition of Ka band to the previously used Q- and V-band channels significantly reduces the uncertainty in the optical depth parameter, tau. Further scientific results from the five-year data analysis are presented in six companion papers and are summarized in Section 7 of this paper. With the five-year WMAP data, we detect no convincing deviations from the minimal six-parameter ACDM model: a flat universe dominated by a cosmological constant, with adiabatic and nearly scale-invariant Gaussian fluctuations. Using WMAP data combined with measurements of Type Ia supernovae and Baryon Acoustic Oscillations in the galaxy distribution, we find (68% CL uncertainties): OMEGA(sub b)h(sup 2) = 0.02267(sup +0.00058)(sub -0.00059), OMEGA(sub c)h(sup 2) = 0.1131 plus or minus 0.0034, OMEGA(sub logical and) = 0.726 plus or minus 0.015, ns = .960 plus or minus 0.013, tau = 0.84 plus or minus 0.016, and DELTA(sup 2)(sub R) = (22.445 plus or minus 0.096) x 10(exp -9) at k = 0.002 Mpc(exp -1). From these we derive sigma(sub 8) = 0.812 plus or minus 0.026, H(sub 0) = 70.5 plus or minus 1.3 kilometers per second Mpc(exp -1), OMEGA(sub b) = 0.0456 plus or minus 0.0015, OMEGA(sub c) = .228 plus or minus

  2. Operation and control of SBR processes for enhanced biological nutrient removal from wastewater

    OpenAIRE

    Puig Broch, Sebastià

    2008-01-01

    In the last decades, the awareness of environmental issues has increased in society considerably. There is an increasing need to improve the effluent quality of domestic wastewater treatment processes. This thesis describes the application of the Sequencing Batch Reactor (SBR) technology for Biological Nutrient Removal (BNR) from the wastewater. In particular, the work presented evolves from the nitrogen removal to the biological nutrient removal (i.e. nitrogen plus phosphorous removal) with ...

  3. Micropollutant removal from municipal wastewater: from conventional treatments to advanced biological processes

    OpenAIRE

    Margot, Jonas

    2015-01-01

    Many micropollutants present in municipal wastewater, such as pharmaceuticals and pesticides, are poorly removed in conventional wastewater treatment plants (WWTPs), and may generate adverse effects on aquatic life. The objective of this thesis was to study and develop various options to improve micropollutant removal from municipal wastewaters. Various technologies were investigated, from conventional biological treatments to advanced physico-chemical and biological processes such as ozonati...

  4. Degrading organic micropollutants: The next challenge in the evolution of biological wastewater treatment processes

    OpenAIRE

    Naresh eSinghal; Octavio ePerez-Garcia

    2016-01-01

    Global water scarcity is driving the need for identifying new water source. Wastewater could be a potential water resource if appropriate treatment technologies could be developed. One of the barriers to obtaining high quality water from wastewater arises from the presence of organic micropollutants, which are biologically active at trace levels. Removal of these compounds from wastewater by current physico-chemical technologies is prohibitively expensive. While biological treatment processes...

  5. Biological and Physiological Markers of Tactile Sensorial Processing in Healthy Newborns

    OpenAIRE

    Gonçalves, MG; Caldeira-da-Silva, P

    2012-01-01

    The main objective of this review is to provide a descriptive analysis of the biological and physiological markers of tactile sensorial processing in healthy, full-term newborns. Research articles were selected according to the following study design criteria: (a) tactile stimulation for touch sense as an independent variable; (b) having at least one biological or physiological variable as a dependent variable; and (c) the group of participants were characterized as full-term and healthy newb...

  6. Noise in Biology

    OpenAIRE

    Tsimring, Lev S

    2014-01-01

    Noise permeates biology on all levels, from the most basic molecular, sub-cellular processes to the dynamics of tissues, organs, organisms, and populations. The functional roles of noise in biological processes can vary greatly. Along with standard, entropy-increasing effects of producing random mutations, diversifying phenotypes in isogenic populations, limiting information capacity of signaling relays, it occasionally plays more surprising constructive roles by accelerating the pace of evol...

  7. Integration of advanced oxidation technologies and biological processes: recent developments, trends, and advances.

    Science.gov (United States)

    Tabrizi, Gelareh Bankian; Mehrvar, Mehrab

    2004-01-01

    The greatest challenge of today's wastewater treatment technology is to optimize the use of biological and chemical wastewater treatment processes. The choice of the process and/or integration of the processes depend strongly on the wastewater characteristics, concentrations, and the desired efficiencies. It has been observed by many investigators that the coupling of a bioreactor and advanced oxidation processes (AOPs) could reduce the final concentrations of the effluent to the desired values. However, optimizing the total cost of the treatment is a challenge, as AOPs are much more expensive than biological processes alone. Therefore, an appropriate design should not only consider the ability of this coupling to reduce the concentration of organic pollutants, but also try to obtain the desired results in a cost effective process. To consider the total cost of the treatment, the residence time in biological and photochemical reactors, the kinetic rates, and the capital and operating costs of the reactors play significant roles. In this study, recent developments and trends (1996-2003) on the integration of photochemical and biological processes for the degradation of problematic pollutants in wastewater have been reviewed. The conditions to get the optimum results from this integration have also been considered. In most of the studies, it has been shown that the integrated processes were more efficient than individual processes. However, slight changes in the configuration of the reactors, temperature, pH, treatment time, concentration of the oxidants, and microorganism's colonies could lead to a great deviation in results. It has also been demonstrated that the treatment cost in both reactors is a function of time, which changes by the flow rate. The minimum cost in the coupling of the processes cannot be achieved unless considering the best treatment time in chemical and biological reactors individually. PMID:15533022

  8. Mineralization of 2-chlorophenol by sequential electrochemical reductive dechlorination and biological processes.

    Science.gov (United States)

    Arellano-González, Miguel Ángel; González, Ignacio; Texier, Anne-Claire

    2016-08-15

    In this work, a novel approach was applied to obtain the mineralization of 2-chlorophenol (2-CP) in an electrochemical-biological combined system where an electrocatalytic dehydrogenation process (reductive dechlorination) was coupled to a biological denitrification process. Reductive dechlorination of 2-CP was conducted in an ECCOCEL-type reactor on a Pd-Ni/Ti electrode at a potential of -0.40V vs Ag/AgCl(s)/KCl(sat), achieving 100 percent transformation of 2-CP into phenol. The electrochemically pretreated effluent was fed to a rotating cylinder denitrifying bioreactor where the totality of phenol was mineralized by denitrification, obtaining CO2 and N2 as the end products. The total time required for 2-CP mineralization in the combined electrochemical-biological process was 7.5h. This value is close to those previously reported for electrochemical and advanced oxidation processes but in this case, an efficient process was obtained without accumulation of by-products or generation of excessive energy costs due to the selective electrochemical pretreatment. This study showed that the use of electrochemical reductive pretreatment combined with biological processes could be a promising technology for the removal of recalcitrant molecules, such as chlorophenols, from wastewaters by more efficient, rapid, and environmentally friendly processes. PMID:27131458

  9. A basic experimental study on characteristics of on-line human information processing associated with man-machine interface

    Energy Technology Data Exchange (ETDEWEB)

    Yoshikawa, Hidekazu (Kyoto Univ., Uji (Japan). Inst. of Atomic Energy); Shimoda, Hiroshi; Nagai, Yoshinori; Kojima, Shin-ichi

    1990-09-01

    Regarding human factors research on man-machine interface, a basic psychological experiment was conducted to observe psycho-physiological characteristics of on-line human cognitive behavior when cognitive tasks on learning and pattern classification were given to subjects by personal computer using a simple state transition model. During the experiment, three different types of subjects' data were recorded: (i) eye movement data by eye mark recorder, (ii) physio-electric signals by polygraph and (iii) verbal reports. Those subjects' data were analyzed with respect to: (i) the related human cognitive characteristics concerning problem solving strategy, measures of problem difficulty and mental image effect, (ii) observed eye movement characteristics such as saccade, attention, pupil reaction and blinking, etc., and (iii) obtained characteristics of skin potential response and heart rate. It was found that the application of psycho-physiological measurement would serve to objective and detailed analysis of on-line cognitive process. (author).

  10. A basic experimental study on characteristics of on-line human information processing associated with man-machine interface

    International Nuclear Information System (INIS)

    Regarding human factors research on man-machine interface, a basic psychological experiment was conducted to observe psycho-physiological characteristics of on-line human cognitive behavior when cognitive tasks on learning and pattern classification were given to subjects by personal computer using a simple state transition model. During the experiment, three different types of subjects' data were recorded: (i) eye movement data by eye mark recorder, (ii) physio-electric signals by polygraph and (iii) verbal reports. Those subjects' data were analyzed with respect to: (i) the related human cognitive characteristics concerning problem solving strategy, measures of problem difficulty and mental image effect, (ii) observed eye movement characteristics such as saccade, attention, pupil reaction and blinking, etc., and (iii) obtained characteristics of skin potential response and heart rate. It was found that the application of psycho-physiological measurement would serve to objective and detailed analysis of on-line cognitive process. (author)

  11. An Investigation Of The Influence Of Leadership And Processes On Basic Performance Results Using A Decision Model Based On Efqm

    Directory of Open Access Journals (Sweden)

    Ahmet Talat İnan

    2013-06-01

    Full Text Available EFQM Excellence Model is a quality approach that companies benefit in achieving success. EFQM Excellence Model is an assessment tool helping to determine what is competence and missing aspects in achieving excellence.In this study, based on the EFQM Excellence Model, the influence of basic performance results caused by leadership and processes variables in this model of a firm engaged in maintenance and repair services due to a large-scale company. In this work, a survey was conducted that covering the company's employees and managers. The data obtained from this survey was utilized by using SPSS16.0 statistics software in respect of factor analysis, reliability analysis, correlation and regression analysis. The relation between variables was evaluated taking into account the resuşts of analysis.

  12. Visual processing in reading disorders and attention-deficit/hyperactivity disorder and its contribution to basic reading ability.

    Science.gov (United States)

    Kibby, Michelle Y; Dyer, Sarah M; Vadnais, Sarah A; Jagger, Audreyana C; Casher, Gabriel A; Stacy, Maria

    2015-01-01

    Whether visual processing deficits are common in reading disorders (RD), and related to reading ability in general, has been debated for decades. The type of visual processing affected also is debated, although visual discrimination and short-term memory (STM) may be more commonly related to reading ability. Reading disorders are frequently comorbid with ADHD, and children with ADHD often have subclinical reading problems. Hence, children with ADHD were used as a comparison group in this study. ADHD and RD may be dissociated in terms of visual processing. Whereas RD may be associated with deficits in visual discrimination and STM for order, ADHD is associated with deficits in visual-spatial processing. Thus, we hypothesized that children with RD would perform worse than controls and children with ADHD only on a measure of visual discrimination and a measure of visual STM that requires memory for order. We expected all groups would perform comparably on the measure of visual STM that does not require sequential processing. We found children with RD or ADHD were commensurate to controls on measures of visual discrimination and visual STM that do not require sequential processing. In contrast, both RD groups (RD, RD/ADHD) performed worse than controls on the measure of visual STM that requires memory for order, and children with comorbid RD/ADHD performed worse than those with ADHD. In addition, of the three visual measures, only sequential visual STM predicted reading ability. Hence, our findings suggest there is a deficit in visual sequential STM that is specific to RD and is related to basic reading ability. The source of this deficit is worthy of further research, but it may include both reduced memory for order and poorer verbal mediation. PMID:26579020

  13. Research on rural sewage treatment using biological-ecological coupling process

    OpenAIRE

    Shi, Chang; Zhang, Jing; Liu, Chun; Zaixing LI; Gen WU; Yang, Jingliang

    2016-01-01

    Developing low-investment, low-energy consumption and low-maintenance sewage treatment process is important for sewage treatment in rural areas. An upflow anaerobic filter (UAF) without energy consumption and a subsurface flow wetland (SFW) are utilized as a biological-ecological coupling process to treat rural domestic sewage. The effect of the coupling process on treatment performance of domestic sewage under different hydraulic retention time (HRT) is investigated. The removal of nitrogen ...

  14. An ontology-based approach to systems biology literature retrieval and processing

    OpenAIRE

    Lourenço, Anália; Simões, Alberto; Almeida, J. J.; Rocha, Miguel; Rocha, I; Ferreira, E. C.

    2007-01-01

    This paper details the SysBio Explorer, a Systems Biology Literature Retrieval and Processing Framework, whose aim relies on the automatic inference of regulatory and metabolic networks based on biomedical literature. The SysBio Explorer does not focus on any organism or problem in particular and encompasses a number of processing and analysis techniques. It works over full-text documents, applying Natural Language Processing techniques and using biomedical dictionaries and ontologies togethe...

  15. Design and application of calorimeters for monitoring biological processes in stirred tank bioreactors

    OpenAIRE

    Regestein, Lars

    2013-01-01

    Developing and improving online monitoring techniques for processes is always a matter of interest for industrial and research applications. Independent of kind and complexity of the reaction, measuring the heat generation (calorimetry) is a universal tool for process monitoring. Therefore, two new calorimetric measurement techniques (chip calorimeter and reactor calorimeter) for process monitoring in stirred tank reactors were developed, validated and applied to several biological systems. ...

  16. Nonequilibrium thermodynamics transport and rate processes in physical, chemical and biological systems

    CERN Document Server

    Demirel, Yasar

    2014-01-01

    Natural phenomena consist of simultaneously occurring transport processes and chemical reactions. These processes may interact with each other and may lead to self-organized structures, fluctuations, instabilities, and evolutionary systems. Nonequilibrium Thermodynamics, 3rd edition emphasizes the unifying role of thermodynamics in analyzing the natural phenomena. This third edition updates and expands on the first and second editions by focusing on the general balance equations for coupled processes of physical, chemical, and biological systems. The new edition contains a new chapte

  17. In Vivo Bioluminescent Imaging (BLI: Noninvasive Visualization and Interrogation of Biological Processes in Living Animals

    Directory of Open Access Journals (Sweden)

    Steven Ripp

    2010-12-01

    Full Text Available In vivo bioluminescent imaging (BLI is increasingly being utilized as a method for modern biological research. This process, which involves the noninvasive interrogation of living animals using light emitted from luciferase-expressing bioreporter cells, has been applied to study a wide range of biomolecular functions such as gene function, drug discovery and development, cellular trafficking, protein-protein interactions, and especially tumorigenesis, cancer treatment, and disease progression. This article will review the various bioreporter/biosensor integrations of BLI and discuss how BLI is being applied towards a new visual understanding of biological processes within the living organism.

  18. The Basic Social Process in the Culture of the Self-Sufficient Organization. An Application of Grounded Theory

    Directory of Open Access Journals (Sweden)

    Sofia CHIRICĂ

    2010-06-01

    Full Text Available The hereby research encompasses the results of an analysis conducted based on the grounded theory methodology over the qualitative data that were gathered through a national project regarding the organizational development of the mental health institutions. After the finalization of the project, the interest for the grounded theory methodology and the reconsideration of the organizational development notion and of the role of the consultant in this process have all lead to a re-analysis of the qualitative data procured in one of the hospitals included in the project. Our approach resulted in an explanatory model of how the organization works and the factors that can affect various changes during its development. This explanatory model holds at its center a basic psychological and social process that represents the perception of the organizational system as closed on certain coordinates, although structurally open. This very perception and the behavior of maintaining the system within closed coordinates allow only for a dual functioning and so the natural result is the emergence of a self-sufficient culture. The central feature of this particular culture is the replacement of the formal organization and its goal of caring for the mentally challenged with an organization reduced to its sole goal of survival.

  19. Administrative Aspects of the Criticality Controls Used in Programmes for Basic Criticality Research, Reactor Development and Materials Processing

    International Nuclear Information System (INIS)

    This paper describes the administrative and procedural aspects of criticality controls used by a field office of the United States Atomic Energy Commission in programmes that include reactor criticals, research and materials testing reactors, and power reactor development. Situations encountered include handling, storing, and processing large quantities of uranium-235 and plutonium-239 of various configurations and compositions in laboratories and operations which gather basic criticality data, processing of fissile material, and varied reactor research and development, programmes including fuel materials. Similar situations exist for uranium-233 and plutonium-238 on a smaller laboratory scale. The administrative controls and interactions of the USAEC field office and the operating contractors, who operate these installations for the USAEC, are outlined. Also, the purpose and scope of the direct examination by USAEC personnel of these contractor facilities are analysed. The programme has been in effect for three years and is believed to be successful in maintaining efficient operations and an acceptable low level of risk of inadvertent criticality. Success of this programme is in good measure due to the close working relationship between the staffs of the USAEC field office and the operating contractors. (author)

  20. Degrading organic micropollutants: The next challenge in the evolution of biological wastewater treatment processes

    Directory of Open Access Journals (Sweden)

    Naresh eSinghal

    2016-05-01

    Full Text Available Global water scarcity is driving the need for identifying new water source. Wastewater could be a potential water resource if appropriate treatment technologies could be developed. One of the barriers to obtaining high quality water from wastewater arises from the presence of organic micropollutants, which are biologically active at trace levels. Removal of these compounds from wastewater by current physico-chemical technologies is prohibitively expensive. While biological treatment processes are comparatively cheap, current systems are not capable of degrading the wide range of organic micropollutants present in wastewater. As current wastewater treatment processes were developed for treating conventional pollutants present at mg/L levels, degrading the ng/L levels of micropollutants will require a different approach to system design and operation. In this paper we discuss strategies that could be employed to develop biological wastewater treatment systems capable of degrading organic micropollutants.

  1. Whole process reclamation and utilization of wastes produced in the biological fermentation industry

    Institute of Scientific and Technical Information of China (English)

    YAN Ling-jun; LI Da-peng; MA Fang; Chein-chi Chang; XU Shan-wen; QIU Shan

    2008-01-01

    Wastes yielded in the vintage process and the biological fermentation of itaconic acid and sodium gluconate of a winery in Shandong,such as grain stillage,melon lees,cornstarch protein residues,itaconic acid mother liquid,itaconic acid mycelium and sodium gluconate mycelium,were studied.Hish-activity biological protein feed,foliar fertilizer and irrigation fertilizer were generated from these wastes by applying biological/microbial technologies.Meanwhile,a whole set of technological pathways Was put forward.As a result,the optimal economical and social benefits can be obtained with low natural resource consumption and environmental costs by converting wastes into useful matters.In conclusion,through the utilization of limited resources in the whole process of reclamation and utilization of wastes,the harmony promotion Can be achieved between the economic system and the natural ecosystem.

  2. A novel process of dye wastewater treatment by linking advanced chemical oxidation with biological oxidation

    Directory of Open Access Journals (Sweden)

    Zou Haiming

    2015-12-01

    Full Text Available Dye wastewater is one of typically non-biodegradable industrial effluents. A new process linking Fenton’s oxidation with biological oxidation proposed in this study was investigated to degrade the organic substances from real dye wastewater. During the combination process, the Fenton’s oxidation process can reduce the organic load and enhance biodegradability of dye wastewater, which is followed by biological aerated filter (BAF system to further remove organic substances in terms of discharge requirement. The results showed that 97.6% of chemical oxygen demand (COD removal by the combination process was achieved at the optimum process parameters: pH of 3.5, H2O2 of 2.0 mL/L, Fe(II of 500 mg/L, 2.0 h treatment time in the Fenton’s oxidation process and hydraulic retention time (HRT of 5 h in the BAF system. Under these conditions, COD concentration of effluent was 72.6 mg/L whereas 3020 mg/L in the influent, thus meeting the requirement of treated dye wastewater discharge performed by Chinese government (less than 100 mg/L. These results obtained here suggest that the new process combining Fenton’s oxidation with biological oxidation may provide an economical and effective alternative for treatment of non-biodegradable industrial wastewater.

  3. Treatment of linear alkylbenzene sulfonate (LAS) wastewater by internal electrolysis--biological contact oxidation process.

    Science.gov (United States)

    Cao, X Z; Li, Y M

    2011-01-01

    Surfactant wastewater is usually difficult to treat due to its toxicity and poor biodegradability. A separate physico-chemical or biochemical treatment method achieves a satisfactory effect with difficulty. In this study, treatment of the wastewater collected from a daily chemical plant by the combination processes of Fe/C internal electrolysis and biological contact oxidation was investigated. For the internal electrolysis process, the optimal conditions were: pH = 4-5, Fe/C = (10-15):1, air-water ratio = (10-20):1 and hydraulic retention time (HRT)= 2 h. For the biological contact oxidation process, the optimal conditions were: HRT = 12 h, DO = 4.0-5.0 mg/L. Treated by the above combined processes, the effluent could meet the I-grade criteria specified in Integrated Wastewater Discharge Standard of China (GB 8978-1996). The results provide valuable information for full-scale linear alkylbenzene sulfonate wastewater treatment. PMID:22053469

  4. Body Basics Library

    Science.gov (United States)

    ... a Friend Who Cuts? About the Body Basics Library KidsHealth > For Teens > About the Body Basics Library Print A A A Text Size Did you ... system, part, and process works. Use this medical library to find out about basic human anatomy, how ...

  5. Investigation and design of the dismantling process for irradiation capsules containing tritium. 1. Conceptual investigation and basic design

    International Nuclear Information System (INIS)

    In-pile functional tests of tritium breeding blankets for fusion reactors have been planned by Japan Atomic Energy Agency (JAEA), using a test blanket module (TBM) which will be loaded in ITER. In preparation for the in-pile functional tests, JAEA has been being performed irradiation experiments of solid breeder materials including Li2TiO3, which is the first candidate of tritium breeder materials for the blanket of the demonstration reactor (DEMO) in a water-cooled solid-breeder design concept in Japan. The present report describes conceptual investigation and basic design of the dismantling process for irradiation capsules which were used in irradiation experiments by the Japan Materials Testing Reactor (JMTR) of JAEA. An irradiation capsule to be dismantled is comprised of a cylindrical outer-container (65mm in outer diameter) and an inner-container which is loaded with Li2TiO3 pebbles. In the present design, the irradiation capsule is cut by a band saw; the released tritium is recovered safely by a purge-gas system, and is consolidated into a radioactive waste form. Furthermore, an inner-box enclosing the dismantling apparatus has been designed as a safety countermeasure of possible tritium release from the dismantling apparatus in accidental events. The adoption of the inner-box has brought a prospect to be able to utilize an existing hot cell (β γ cell) equipped with usual wall material permeable to tritium, without extensive refurbishing of the cell. Thus, the present study has indicated the feasibility of the dismantling process for the irradiated JMTR capsules containing tritium. The results of the present investigation and design will contribute to the design of the TBM structure and to the planning of the dismantling process of the TBM. (author)

  6. Biodrying for mechanical-biological treatment of wastes: A review of process science and engineering

    OpenAIRE

    Velis, C.A.; Longhurst, Philip J.; Drew, Gillian H; Smith, Richard; Pollard, Simon J. T.

    2009-01-01

    Biodrying is a variation of aerobic decomposition, used within mechanical–biological treatment (MBT) plants to dry and partially stabilise residual municipal waste. Biodrying MBT plants can produce a high quality solid recovered fuel (SRF), high in biomass content. Here, process objectives, operating principles, reactor designs, parameters for process monitoring and control, and their effect on biodried output quality are critically examined. Within the biodrying reactors, w...

  7. Treatment of Textile Wastewater by Combining Biological Processes and Advanced Oxidation

    OpenAIRE

    Punzi, Marisa

    2015-01-01

    Treatment of textile wastewater is challenging because the water contains toxic compounds that have low biodegradability. Dyes, detergents, surfactants, biocides and more are used to improve the textile process and to make the clothes resistant to physical, chemical and biological agents. New technologies have been developed in the last decades and in particular Advanced Oxidation Processes (AOPs) have shown considerable potential for treatment of industrial effluents. These pr...

  8. Chemical analysis and biological testing of materials from the EDS coal liquefaction process: a status report

    Energy Technology Data Exchange (ETDEWEB)

    Later, D.W.; Pelroy, R.A.; Wilson, B.W.

    1984-05-01

    Representative process materials were obtained from the EDS pilot plant for chemical and biological analyses. These materials were characterized for biological activity and chemical composition using a microbial mutagenicity assay and chromatographic and mass spectrometric analytical techniques. The two highest boiling distillation cuts, as well as process solvent (PS) obtained from the bottoms recycle mode operation, were tested for initiation of mouse skin tumorigenicity. All three materials were active; the crude 800/sup 0 +/F cut was substantially more potent than the crude bottoms recycle PS or 750 to 800/sup 0/F distillate cut. Results from chemical analyses showed the EDS materials, in general, to be more highly alkylated and have higher hydroaromatic content than analogous SRC II process materials (no in-line process hydrogenation) used for comparison. In the microbial mutagenicity assays the N-PAC fractions showed greater activity than did the aliphatic hydrocarbon, hydroxy-PAH, or PAH fractions, although mutagenicity was detected in certain PAH fractions by a modified version of the standard microbial mutagenicity assay. Mutagenic activities for the EDS materials were lower, overall, than those for the corresponding materials from the SRC II process. The EDS materials produced under different operational modes had distinguishable differences in both their chemical constituency and biological activity. The primary differences between the EDS materials studied here and their SRC II counterparts used for comparison are most likely attributable to the incorporation of catalytic hydrogenation in the EDS process. 27 references, 28 figures, 27 tables.

  9. Proceeding of the Scientific Meeting and Presentation on Basic Research in Nuclear of the Scientific and Technology Part II : Nuclear Chemistry; Process Technology and Radioactive Waste Management; Environment

    International Nuclear Information System (INIS)

    Scientific Meeting and Presentation on Basic Research in Nuclear Science and Technology is a routine activity was held by Yogyakarta Nuclear Research Centre, National Atomic Energy Agency (BATAN) for monitoring the research activity which achieved in BATAN. The Proceeding contains a proposal about basic which has Nuclear Chemistry, Process Technology, Radioactive Waste Management and Environment. This proceeding is the second part from two part which published in series. There are 61 articles which have separated index

  10. Biological removal of methanol from process condensate for the purpose of reclamation

    Institute of Scientific and Technical Information of China (English)

    WANG Yan-ming; YANG Min; ZHANG Yu; GAO Meng-chun; ZHANG Jing

    2004-01-01

    The biological removal of methanol from condensate of ammonia manufacturing processes for the purpose of reclamation using contact type reactor was studied. Methanol of 60 mg/L was removed completely under an HRT of 1.12 h. Optimal inorganic nutrient dose was determined on evaluating methanol removal performance and dehydrogenase activities (DHA) under different nutrition doses. The optimal inorganic nutrient dose only gave an increase of conductivity of ca. 10 μs/cm2 in the effluent on treating synthetic condensate containing methanol of 30 mg/L. The results demonstrated that biological removal of methanol was effective for the purpose of recovering the methanol-bearing condensate.

  11. Simultaneous nitrification and denitrification in step feeding biological nitrogen removal process

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The simultaneous nitrification and denitrification in step-feeding biological nitrogen removal process were investigated under different influent substrate concentrations and aeration flow rates.Biological occurrence of simultaneous nitrification and denitrifieation was verified in the aspect of nitrogen mass balance and alkalinity.The experimental results also showed that there was a distinct linear relationship between simultaneous nitrification and denitrification and DO concentration under the conditions of low and high aeration flow rate.In each experimental run the floe sizes of activated sludge were also measured and the results showed that simultaneous nitrification and denitrification could occur with very small size of floc.

  12. How to Build a Course in Mathematical–Biological Modeling: Content and Processes for Knowledge and Skill

    OpenAIRE

    Hoskinson, Anne-Marie

    2010-01-01

    Biological problems in the twenty-first century are complex and require mathematical insight, often resulting in mathematical models of biological systems. Building mathematical–biological models requires cooperation among biologists and mathematicians, and mastery of building models. A new course in mathematical modeling presented the opportunity to build both content and process learning of mathematical models, the modeling process, and the cooperative process. There was little guidance fro...

  13. Biclustering with Flexible Plaid Models to Unravel Interactions between Biological Processes.

    Science.gov (United States)

    Henriques, Rui; Madeira, Sara C

    2015-01-01

    Genes can participate in multiple biological processes at a time and thus their expression can be seen as a composition of the contributions from the active processes. Biclustering under a plaid assumption allows the modeling of interactions between transcriptional modules or biclusters (subsets of genes with coherence across subsets of conditions) by assuming an additive composition of contributions in their overlapping areas. Despite the biological interest of plaid models, few biclustering algorithms consider plaid effects and, when they do, they place restrictions on the allowed types and structures of biclusters, and suffer from robustness problems by seizing exact additive matchings. We propose BiP (Biclustering using Plaid models), a biclustering algorithm with relaxations to allow expression levels to change in overlapping areas according to biologically meaningful assumptions (weighted and noise-tolerant composition of contributions). BiP can be used over existing biclustering solutions (seizing their benefits) as it is able to recover excluded areas due to unaccounted plaid effects and detect noisy areas non-explained by a plaid assumption, thus producing an explanatory model of overlapping transcriptional activity. Experiments on synthetic data support BiP's efficiency and effectiveness. The learned models from expression data unravel meaningful and non-trivial functional interactions between biological processes associated with putative regulatory modules. PMID:26357312

  14. Microfluidic solutions enabling continuous processing and monitoring of biological samples: A review.

    Science.gov (United States)

    Karle, Marc; Vashist, Sandeep Kumar; Zengerle, Roland; von Stetten, Felix

    2016-07-27

    The last decade has witnessed tremendous advances in employing microfluidic solutions enabling Continuous Processing and Monitoring of Biological Samples (CPMBS), which is an essential requirement for the control of bio-processes. The microfluidic systems are superior to the traditional inline sensors due to their ability to implement complex analytical procedures, such as multi-step sample preparation, and enabling the online measurement of parameters. This manuscript provides a backgound review of microfluidic approaches employing laminar flow, hydrodynamic separation, acoustophoresis, electrophoresis, dielectrophoresis, magnetophoresis and segmented flow for the continuous processing and monitoring of biological samples. The principles, advantages and limitations of each microfluidic approach are described along with its potential applications. The challenges in the field and the future directions are also provided. PMID:27251944

  15. Natural physical and biological processes compromise the long-term performance of compacted soil caps

    International Nuclear Information System (INIS)

    Compacted soil barriers are components of essentially all caps placed on closed waste disposal sites. The intended functions of soil barriers in waste facility caps include restricting infiltration of water and release of gases and vapors, either independently or in combination with synthetic membrane barriers, and protecting other manmade or natural barrier components. Review of the performance of installed soil barriers and of natural processes affecting their performance indicates that compacted soil caps may function effectively for relatively short periods (years to decades), but natural physical and biological processes can be expected to cause them to fail in the long term (decades to centuries). This paper addresses natural physical and biological processes that compromise the performance of compacted soil caps and suggests measures that may reduce the adverse consequences of these natural failure mechanisms

  16. Activity build-up on the circulation loops of boiling water reactors: Basics for modelling of transport and deposition processes

    International Nuclear Information System (INIS)

    In the past 20 years the radiation field of nuclear power plant loops outside the core zone was the object of investigations in many countries. In this context test loops were built and basic research done. At our Institute PSI the installation of a LWR-contamination loop is planned for this year. This experimental loop has the purpose to investigate the complex phenomena of activity deposition from the primary fluid of reactor plants and to formulate analytical models. From the literature the following conclusions can be drawn: The principal correlations of the activity build-up outside the core are known. The plant specific single phenomena as corrosion, crud-transport, activation and deposit of cobalt in the oxide layer are complex and only partially understood. The operational experience of particular plants with low contaminated loops (BWR-recirculation loops) show that in principle the problem is manageable. The reduction of the activity build-up in older plants necessitates a combination of measures to modify the crud balance in the primary circuit. In parallel to the experimental work several simulation models in the form of computer programs were developed. These models have the common feature that they are based on mass balances, in which the exchange of materials and the sedimentation processes are described by global empirical transport coefficients. These models yield satisfactory results and allow parameter studies; the application however is restricted to the particular installation. All programs lack models that describe the thermodynamic and hydrodynamic mechanisms on the surface of deposition layers. Analytical investigations on fouling of process equipment led to models that are also applicable to the activity build-up in reactor loops. Therefore it seems appropriate to combine the nuclear simulation models with the fundamental equations for deposition. 10 refs., 18 figs., 3 tabs

  17. Brain Basics

    Medline Plus

    Full Text Available ... as depression. The Growing Brain Inside the Brain: Neurons & Neural Circuits Neurons are the basic working unit of the brain ... specialized for the function of conducting messages. A neuron has three basic parts: Cell body which includes ...

  18. Brain Basics

    Medline Plus

    Full Text Available ... Basics will introduce you to some of this science, such as: How the brain develops How genes and the environment affect the brain The basic structure of the brain How different parts of ...

  19. Backpack Basics

    Science.gov (United States)

    ... How Can I Help a Friend Who Cuts? Backpack Basics KidsHealth > For Teens > Backpack Basics Print A ... it can cause back problems or even injury. Backpacks Are Best Backpacks can't be beat for ...

  20. Asthma Basics

    Science.gov (United States)

    ... Tropical Delight: Melon Smoothie Pregnant? Your Baby's Growth Asthma Basics KidsHealth > For Parents > Asthma Basics Print A ... Asthma Categories en español Asma: aspectos fundamentales About Asthma Asthma is a common lung condition in kids ...

  1. Optimal Size for Maximal Energy Efficiency in Information Processing of Biological Systems Due to Bistability

    CERN Document Server

    Zhang, Chi; Wang, Long-Fei; Yue, Yuan; Yu, Lian-Chun

    2015-01-01

    Energy efficiency is closely related to the evolution of biological systems and is important to their information processing. In this paper, we calculated the excitation probability of a simple model of a bistable biological unit in response to pulsatile inputs, and its spontaneous excitation rate due to noise perturbation. Then we analytically calculated the mutual information, energy cost, and energy efficiency of an array of these bistable units. We found that the optimal number of units could maximize this array's energy efficiency in encoding pulse inputs, which depends on the fixed energy cost. We conclude that demand for energy efficiency in biological systems may strongly influence the size of these systems under the pressure of natural selection.

  2. Hygiene Basics

    Science.gov (United States)

    ... How Can I Help a Friend Who Cuts? Hygiene Basics KidsHealth > For Teens > Hygiene Basics Print A A A Text Size What's ... smell, anyway? Read below for information on some hygiene basics — and learn how to deal with greasy ...

  3. Heterogeneous processes at the intersection of chemistry and biology: A computational approach

    International Nuclear Information System (INIS)

    Heterogeneous processes hold the key to understanding many problems in biology and atmospheric science. In particular, recent experiments have shown that heterogeneous chemistry at the surface of sea-salt aerosols plays a large role in important atmospheric processes with far reaching implications towards understanding of the fate and transport of aerosolized chemical weapons (i.e. organophosphates such as sarin and VX). Unfortunately, the precise mechanistic details of the simplest surface enhanced chemical reactions remain unknown. Understanding heterogeneous processes also has implications in the biological sciences. Traditionally, it is accepted that enzymes catalyze reactions by stabilizing the transition state, thereby lowering the free energy barrier. However, recent findings have shown that a multitude of phenomena likely contribute to the efficiency of enzymes, such as coupled protein motion, quantum mechanical tunneling, or strong electrostatic binding. The objective of this project was to develop and validate a single computational framework based on first principles simulations using tera-scale computational resources to answer fundamental scientific questions about heterogeneous chemical processes relevant to atmospheric chemistry and biological sciences

  4. Biologically inspired large scale chemical sensor arrays and embedded data processing

    Science.gov (United States)

    Marco, S.; Gutiérrez-Gálvez, A.; Lansner, A.; Martinez, D.; Rospars, J. P.; Beccherelli, R.; Perera, A.; Pearce, T.; Vershure, P.; Persaud, K.

    2013-05-01

    Biological olfaction outperforms chemical instrumentation in specificity, response time, detection limit, coding capacity, time stability, robustness, size, power consumption, and portability. This biological function provides outstanding performance due, to a large extent, to the unique architecture of the olfactory pathway, which combines a high degree of redundancy, an efficient combinatorial coding along with unmatched chemical information processing mechanisms. The last decade has witnessed important advances in the understanding of the computational primitives underlying the functioning of the olfactory system. EU Funded Project NEUROCHEM (Bio-ICT-FET- 216916) has developed novel computing paradigms and biologically motivated artefacts for chemical sensing taking inspiration from the biological olfactory pathway. To demonstrate this approach, a biomimetic demonstrator has been built featuring a large scale sensor array (65K elements) in conducting polymer technology mimicking the olfactory receptor neuron layer, and abstracted biomimetic algorithms have been implemented in an embedded system that interfaces the chemical sensors. The embedded system integrates computational models of the main anatomic building blocks in the olfactory pathway: the olfactory bulb, and olfactory cortex in vertebrates (alternatively, antennal lobe and mushroom bodies in the insect). For implementation in the embedded processor an abstraction phase has been carried out in which their processing capabilities are captured by algorithmic solutions. Finally, the algorithmic models are tested with an odour robot with navigation capabilities in mixed chemical plumes

  5. Group processing in an undergraduate biology course for preservice teachers: Experiences and attitudes

    Science.gov (United States)

    Schellenberger, Lauren Brownback

    Group processing is a key principle of cooperative learning in which small groups discuss their strengths and weaknesses and set group goals or norms. However, group processing has not been well-studied at the post-secondary level or from a qualitative or mixed methods perspective. This mixed methods study uses a phenomenological framework to examine the experience of group processing for students in an undergraduate biology course for preservice teachers. The effect of group processing on students' attitudes toward future group work and group processing is also examined. Additionally, this research investigated preservice teachers' plans for incorporating group processing into future lessons. Students primarily experienced group processing as a time to reflect on past performance. Also, students experienced group processing as a time to increase communication among group members and become motivated for future group assignments. Three factors directly influenced students' experiences with group processing: (1) previous experience with group work, (2) instructor interaction, and (3) gender. Survey data indicated that group processing had a slight positive effect on students' attitudes toward future group work and group processing. Participants who were interviewed felt that group processing was an important part of group work and that it had increased their group's effectiveness as well as their ability to work effectively with other people. Participants held positive views on group work prior to engaging in group processing, and group processing did not alter their atittude toward group work. Preservice teachers who were interviewed planned to use group work and a modified group processing protocol in their future classrooms. They also felt that group processing had prepared them for their future professions by modeling effective collaboration and group skills. Based on this research, a new model for group processing has been created which includes extensive

  6. Biological Production in Lakes. Physical Processes in Terrestrial and Aquatic Ecosystems, Ecological Processes.

    Science.gov (United States)

    Walters, R. A.; Carey, G. F.

    These materials were designed to be used by life science students for instruction in the application of physical theory to ecosystem operation. Most modules contain computer programs which are built around a particular application of a physical process. Primary production in aquatic ecosystems is carried out by phytoplankton, microscopic plants…

  7. The Influence of Nanoadditives on the Biological Properties and Chemical Composition of Process Fluids

    Directory of Open Access Journals (Sweden)

    Borůvková K.

    2015-12-01

    Full Text Available In this study process fluids were tested after the addition of nanoparticles. Cooling and lubricating process fluids are used in machining to reduce wear on tools, to increase machine performance and to improve product quality. The use of process fluids leads to their pollution and contamination. Nanoparticles were added to the process fluids in order to increase their antibacterial activity. The selected nanoparticles were nanoparticles of metallic silver. The process fluids were modified by the addition of silver nitrate and ascorbic acid. Reduction of silver nanoparticles in the volume of the fluid was achieved using UV. The modified fluids were tested for their cytotoxicity and changes in chemical composition. The cytotoxicity of process fluids was tested for the purpose of verifying whether the process fluids, which are in direct contact with the skin of the operator, affect the health of the operator. The cytotoxicity of the process fluids was tested on human fibroblast cells. Fibroblasts are the basic cells of fibrous tissue. The cytotoxicity was tested by measuring the cell viability and using XTT. Analysis of chemical composition was performed for the purpose of determining the individual substances in the process fluids and their chemical stability. Qualitative analysis of the process fluids was performed using gas chromatography mass spectrometry (GC - MS.

  8. Telemetry System of Biological Parameters

    OpenAIRE

    2005-01-01

    The mobile telemetry system of biological parameters serves for reading and wireless data transfer of measured values of selected biological parameters to an outlying computer. It concerns basically long time monitoring of vital function of car pilot.The goal of this projects is to propose mobile telemetry system for reading, wireless transfer and processing of biological parameters of car pilot during physical and psychical stress. It has to be made with respect to minimal consum...

  9. The neurophysiology of human biological motion processing: a high-density electrical mapping study.

    Science.gov (United States)

    Krakowski, Aaron I; Ross, Lars A; Snyder, Adam C; Sehatpour, Pejman; Kelly, Simon P; Foxe, John J

    2011-05-01

    The neural processing of biological motion (BM) is of profound experimental interest since it is often through the movement of another that we interpret their immediate intentions. Neuroimaging points to a specialized cortical network for processing biological motion. Here, high-density electrical mapping and source-analysis techniques were employed to interrogate the timing of information processing across this network. Participants viewed point-light-displays depicting standard body movements (e.g. jumping), while event-related potentials (ERPs) were recorded and compared to ERPs to scrambled motion control stimuli. In a pair of experiments, three major phases of BM-specific processing were identified: 1) The earliest phase of BM-sensitive modulation was characterized by a positive shift of the ERP between 100 and 200 ms after stimulus onset. This modulation was observed exclusively over the right hemisphere and source-analysis suggested a likely generator in close proximity to regions associated with general motion processing (KO/hMT). 2) The second phase of BM-sensitivity occurred from 200 to 350 ms, characterized by a robust negative-going ERP modulation over posterior middle temporal regions bilaterally. Source-analysis pointed to bilateral generators at or near the posterior superior temporal sulcus (STS). 3) A third phase of processing was evident only in our second experiment, where participants actively attended the BM aspect of the stimuli, and was manifest as a centro-parietal positive ERP deflection, likely related to later cognitive processes. These results point to very early sensory registration of biological motion, and highlight the interactive role of the posterior STS in analyzing the movements of other living organisms. PMID:21276862

  10. HRI catalytic two-stage liquefaction (CTSL) process materials: chemical analysis and biological testing

    Energy Technology Data Exchange (ETDEWEB)

    Wright, C.W.; Later, D.W.

    1985-12-01

    This report presents data from the chemical analysis and biological testing of coal liquefaction materials obtained from the Hydrocarbon Research, Incorporated (HRI) catalytic two-stage liquefaction (CTSL) process. Materials from both an experimental run and a 25-day demonstration run were analyzed. Chemical methods of analysis included adsorption column chromatography, high-resolution gas chromatography, gas chromatography/mass spectrometry, low-voltage probe-inlet mass spectrometry, and proton nuclear magnetic resonance spectroscopy. The biological activity was evaluated using the standard microbial mutagenicity assay and an initiation/promotion assay for mouse-skin tumorigenicity. Where applicable, the results obtained from the analyses of the CTSL materials have been compared to those obtained from the integrated and nonintegrated two-stage coal liquefaction processes. 18 refs., 26 figs., 22 tabs.

  11. Marketing the use of the space environment for the processing of biological and pharmaceutical materials

    Science.gov (United States)

    1984-01-01

    The perceptions of U.S. biotechnology and pharmaceutical companies concerning the potential use of the space environment for the processing of biological substances was examined. Physical phenomena that may be important in space-base processing of biological materials are identified and discussed in the context of past and current experiment programs. The capabilities of NASA to support future research and development, and to engage in cooperative risk sharing programs with industry are discussed. Meetings were held with several biotechnology and pharmaceutical companies to provide data for an analysis of the attitudes and perceptions of these industries toward the use of the space environment. Recommendations are made for actions that might be taken by NASA to facilitate the marketing of the use of the space environment, and in particular the Space Shuttle, to the biotechnology and pharmaceutical industries.

  12. A Comparative Study of the Bacterial Community in Denitrifying and Traditional Enhanced Biological Phosphorus Removal Processes

    OpenAIRE

    Lv, Xiao-Mei; Shao, Ming-Fei; Li, Chao-Lin; Li, Ji; Gao, Xin-lei; Sun, Fei-Yun

    2014-01-01

    Denitrifying phosphorus removal is an attractive wastewater treatment process due to its reduced carbon source demand and sludge minimization potential. Two lab-scale sequencing batch reactors (SBRs) were operated in alternating anaerobic-anoxic (A-A) or anaerobic-oxic (A-O) conditions to achieve denitrifying enhanced biological phosphate removal (EBPR) and traditional EBPR. No significant differences were observed in phosphorus removal efficiencies between A-A SBR and A-O SBR, with phosphoru...

  13. Influence of Technological Processes on Biologically Active Compounds of Produced Grapes Juices

    Czech Academy of Sciences Publication Activity Database

    Tříska, Jan; Balík, J.; Strohalm, J.; Novotná, P.; Vrchotová, Naděžda; Lefnerová, D.; Landfeld, A.; Híc, P.; Tománková, E.; Veverka, J.; Houška, M.

    2016-01-01

    Roč. 9, č. 3 (2016), s. 421-429. ISSN 1935-5130 R&D Projects: GA MŠk(CZ) LO1415; GA MZe QJ1210258; GA MZe QI91B094 Institutional support: RVO:67179843 Keywords : Grapevine juices * Thermomaceration * Biologically active compounds * Antioxidative capacity * Total polyphenols * Antimutagenic activity Subject RIV: GM - Food Processing Impact factor: 2.691, year: 2014

  14. Influence of physical and chemical factors on biological leaching process of copper from printed circuit boards

    OpenAIRE

    Willner, J

    2013-01-01

    The article presents the results of the research regarding the biological leaching of this metal from electronic wastes components in the form of printed circuit boards. The purpose of the study was to evaluate the influence of some physical and chemical factors (e.g. pH, oxidation-reduction potential) on bioleaching process and efficiency of copper transfer from solid phase into solution. Bioleaching experiments were carried out with pure cultures of Acidithiobacillus ferrooxidans. The obtai...

  15. Diurnal rhythmicity in biological processes involved in bioavailability of functional food factors

    OpenAIRE

    Tsurusaki, Takashi; Sakakibara, Hiroyuki; Aoshima, Yoshiki; Yamazaki, Shunsuke; Sakono, Masanobu; Shimoi, Kayoko

    2013-01-01

    In the past few decades, many types of functional factors have been identified in dietary foods; for example, flavonoids are major groups widely distributed in the plant kingdom. However, the absorption rates of the functional food factors are usually low, and many of these are difficult to be absorbed in the intact forms because of metabolization by biological processes during absorption. To gain adequate beneficial effects, it is therefore mandatory to know whether functional food factors a...

  16. The effect of key process operational conditions on enhanced biological phosphorus removal from wastewater

    OpenAIRE

    Carvalheira, Mónica Isabel Gonçalves

    2014-01-01

    Enhanced biological phosphorus removal (EBPR) is the most economic and sustainable option used in wastewater treatment plants (WWTPs) for phosphorus removal. In this process it is important to control the competition between polyphosphate accumulating organisms (PAOs) and glycogen accumulating organisms (GAOs), since EBPR deterioration or failure can be related with the proliferation of GAOs over PAOs. This thesis is focused on the effect of operational conditions (volatile fatty acid (VFA) c...

  17. Degradation of aqueous methyl tert-butyl ether by photochemical, biological, and their combined processes

    Directory of Open Access Journals (Sweden)

    Azadeh Asadi

    2006-01-01

    Full Text Available The degradation of aqueous methyl tert-butyl ether (MTBE at relatively high concentrations was investigated by various photo-induced oxidation processes such as UV/H2O2 and UV/TiO2 as well as biological processes and their combination. It was shown that the degradation of MTBE by UV/H2O2 and TiO2 photocatalytic followed a first-order model with apparent rate constant of 1.31×10−1 and 1.21×10−2 min-1, respectively. It was observed that UV/H2O2/TiO2 process did not have any advantages over each of the other processes alone. The biodegradation of methyl tert-butyl ether (MTBE was evaluated using aerobic mixed culture with three different approaches, including ultimate biological oxygen demand (BODU assessment, nonacclimated, and acclimated mixed cultures. The apparent rate constant for the biodegradation of MTBE by nonacclimated mixed culture was 4.36×10−2 day-1. It was shown that the acclimatization of the mixed cultures enhanced the rate of biodegradation of MTBE to 3.24×10−1mg L-1h-1. Finally, the effects of the photocatalytic pretreatment of aqueous MTBE on its subsequent biological treatment were studied. It was observed that the rate of bioreaction was not enhanced and the photocatalytic pretreatment had adverse effects on its biological treatment so that the apparent rate constant decreased to 2.83×10−1 mg L-1h-1.

  18. Diffusion processes in biological membranes studied by molecular dynamics simulations and analytical models

    OpenAIRE

    Stachura, Slawomir,

    2014-01-01

    Various recent experimental and simulation studies show that the lateral diffusion of molecules in biological membranes exhibits anomalies, in the sense that the molecular mean square displacements increase sub-linearily instead of linearly with time. Mathematically, such diffusion processes can be modeled by generalized diffusion equations which involve an additional fractional time derivative compared to the corresponding normal counterpart. The aim of this thesis is to gain some more physi...

  19. An iron-facilitated chemical and biological process for phosphorus removal and recovery during wastewater treatment

    OpenAIRE

    Zhao, Kang; 趙鈧

    2013-01-01

    Phosphorus (P) is an important pollutant of concern in wastewater that causes eutrophication and algal blooms in water body. On the other hand, P is a valuable natural resource for agricultural and industrial use. With the rapid depletion of mineral phosphorus on earth, there is a need to recover phosphorus from wastewater. In this study, a new chemical and biological process facilitated with iron dosing has been developed for P removal and recovery during wastewater treatment. The system con...

  20. Intended process water management concept for the mechanical biological treatment of municipal solid waste

    OpenAIRE

    D. Weichgrebe; S. Maerker; T. Böning; H. Stegemann

    2008-01-01

    Accumulating operational experience in both aerobic and anaerobic mechanical biological waste treatment (MBT) makes it increasingly obvious that controlled water management would substantially reduce the cost of MBT and also enhance resource recovery of the organic and inorganic fraction. The MBT plant at Gescher, Germany, is used as an example in order to determine the quantity and composition of process water and leachates from intensive and subsequent rotting, pressing water from anaerobic...

  1. 'TISUCROMA': A Software for Color Processing of Biological Tissue's Images

    International Nuclear Information System (INIS)

    In this work a software intended to plot and analyze digital image RGB histograms from normal and abnormal regions of biological tissue. The obtained RGB histograms from each zone can be used to show the image in only one color or the mixture of some of them. The Software was developed in Lab View to process the images in a laptop. Some medical application examples are shown. (Author)

  2. Reduction of Biological Sludge Production Applying an Alternating Oxic/anoxic Process in Water Line.

    Science.gov (United States)

    Eusebi, Anna Laura; Panigutti, Maximiliano; Battistoni, Paolo

    2016-06-01

    Alternating oxic/anoxic process, applied for the main objective of the improvement of nitrogen performances, was studied in terms of secondary effect of biomass reduction. The process was carried out in one real water resource recovery facility and the data were compared with the previous conventional period when a conventional process was adopted. The main mechanism of the process for the sludge minimization is recognized in the metabolic uncoupling. In fact, an increase of the specific oxygen uptake rate in the biological reactor was recorded stimulated by the change of the oxidation reduction potential environment. Moreover, the heterotrophic growth yield was measured equal to 0.385 kgVSS/kgCOD. The global percentage of reduction was tested with the mass balance of solids. The process is able to decrease the observed sludge yield up to 20%. The specific energy consumption was evaluated. PMID:27225780

  3. Biological processes in the water column of the South Atlantic Bight: Phytoplankton response. Final progress report

    Energy Technology Data Exchange (ETDEWEB)

    Verity, P.G.; Yoder, J.A.

    1992-03-10

    This study addressed shelf-wide processes and nearshore (coastal boundary zone) processes occurring in the southeastern. Coastal boundary zone (CBZ) US continental shelf dynamics involve studies of circulation and of biological and chemical transformations. Continental shelf processes affect the removal of material from the coastal boundary zone into areas where the material no longer interacts with or influences concentrations in the CBZ. The two arbitrarily separate components are, in fact, unified. The CBZ typically extends about 300 km along-shore and about 20 km offshore from its center off Savannah, Georgia, where most runoff occurs. The rates of biological and chemical transformations are controlled by proximity to the bottom and the amounts of fine suspended organic matter originating from rivers and salt marshes. Once material is removed from this zone, either by a long-shelf or cross-shelf advection to regions where the materials are no longer in contact with the bottom, the suite of factors governing the rates of chemical and biological transformations changes. The determination of contrasting rates in these two environments was one of the central focuses of the South Atlantic Bight program.

  4. Determination of Biological Treatability Processes of Textile Wastewater and Implementation of a Fuzzy Logic Model

    Directory of Open Access Journals (Sweden)

    Harun Akif Kabuk

    2015-01-01

    Full Text Available This study investigated the biological treatability of textile wastewater. For this purpose, a membrane bioreactor (MBR was utilized for biological treatment after the ozonation process. Due to the refractory organic contents of textile wastewater that has a low biodegradability capacity, ozonation was implemented as an advanced oxidation process prior to the MBR system to increase the biodegradability of the wastewater. Textile wastewater, oxidized by ozonation, was fed to the MBR at different hydraulic retention times (HRT. During the process, color, chemical oxygen demand (COD, and biochemical oxygen demand (BOD removal efficiencies were monitored for 24-hour, 12-hour, 6-hour, and 3-hour retention times. Under these conditions, 94% color, 65% COD, and 55% BOD removal efficiencies were obtained in the MBR system. The experimental outputs were modeled with multiple linear regressions (MLR and fuzzy logic. MLR results suggested that color removal is more related to COD removal relative to BOD removal. A surface map of this issue was prepared with a fuzzy logic model. Furthermore, fuzzy logic was employed to the whole modeling of the biological system treatment. Determination coefficients for COD, BOD, and color removal efficiencies were 0.96, 0.97, and 0.92, respectively.

  5. Comparative Study on Interaction of Form and Motion Processing Streams by Applying Two Different Classifiers in Mechanism for Recognition of Biological Movement

    Directory of Open Access Journals (Sweden)

    Bardia Yousefi

    2014-01-01

    Full Text Available Research on psychophysics, neurophysiology, and functional imaging shows particular representation of biological movements which contains two pathways. The visual perception of biological movements formed through the visual system called dorsal and ventral processing streams. Ventral processing stream is associated with the form information extraction; on the other hand, dorsal processing stream provides motion information. Active basic model (ABM as hierarchical representation of the human object had revealed novelty in form pathway due to applying Gabor based supervised object recognition method. It creates more biological plausibility along with similarity with original model. Fuzzy inference system is used for motion pattern information in motion pathway creating more robustness in recognition process. Besides, interaction of these paths is intriguing and many studies in various fields considered it. Here, the interaction of the pathways to get more appropriated results has been investigated. Extreme learning machine (ELM has been implied for classification unit of this model, due to having the main properties of artificial neural networks, but crosses from the difficulty of training time substantially diminished in it. Here, there will be a comparison between two different configurations, interactions using synergetic neural network and ELM, in terms of accuracy and compatibility.

  6. Combined processes of two-stage Fenton-biological anaerobic filter-biological aerated filter for advanced treatment of landfill leachate.

    Science.gov (United States)

    Wang, Xiaojun; Han, Jijun; Chen, Zhiwei; Jian, Lei; Gu, Xiaoyang; Lin, Che-Jen

    2012-12-01

    There are numerous non-biodegradable organic materials in the mature landfill leachate. To meet the new discharge standard of China, additional advanced treatment is needed for the effluent from the biological treatment processes of leachate. In this study, a combined process including two stages of "Fenton-biological anaerobic filter (BANF)-biological aerated filter (BAF)" was evaluated to address the advanced treatment need. The Fenton oxidation was applied to reduce chemical oxygen demand (COD) and enhance biodegradability of refractory organics, and the BANF-BAF process was then applied to remove the total nitrogen (TN). The treatment achieved effluent concentrations of CODcost of these processes was about 36.1CHY/t (5.70USD/t). PMID:22841597

  7. Preliminary degradation process study of infectious biological waste in a 5 k W thermal plasma equipment

    International Nuclear Information System (INIS)

    This work is a preliminary study of infectious biological waste degradation process by thermal plasma and was made in Thermal Plasma Applications Laboratory of Environmental Studies Department of the National Institute of Nuclear Research (ININ). Infectious biological waste degradation process is realized by using samples such polyethylene, cotton, glass, etc., but the present study scope is to analyze polyethylene degradation process with mass and energy balances involved. Degradation method is realized as follow: a polyethylene sample is put in an appropriated crucible localized inside a pyrolysis reactor chamber, the plasma jet is projected to the sample, by the pyrolysis phenomena the sample is degraded into its constitutive particles: carbon and hydrogen. Air was utilized as a recombination gas in order to obtain the higher percent of CO2 if amount of O2 is greater in the recombination gas, the CO generation is reduced. The effluent gases of exhaust pyrolysis reactor through are passed through a heat exchanger to get cooled gases, the temperature water used is 15 Centigrade degrees. Finally the gases was tried into absorption tower with water as an absorbent fluid. Thermal plasma degradation process is a very promising technology, but is necessary to develop engineering process area to avail all advantages of thermal plasma. (Author)

  8. Reclaimation of petroleum-based wastewater by noval ozone immobilized biological activated carbon process

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Wastewater reclamation in the petroleum industries in Northern China is important because of the shortage of water resource. Conventional treatment technology used in treating petroleum-based wastewater,namely the 3-phase biological process, typically removes COD, BOD, grease, volatile hydrobenzenes, cyanides, sulfides and suspended solids. However, the process is often ineffective in ammonia-nitrogen removal,and thus the treated effluent quantity can't meet the required standards for reuse. This paper investigated a novel ozone immobilized biological activated carbon (O3-IBAC) process for ammonia nitrogen removal from petroleum-based wastewater. Operated at a HRT (Hydraulic Retention Time) of 15 minutes in IBAC1 and 27 minutes in IBAC2, the O3-IBAC process achieved ammonia nitrogen removal efficiency of 91%. In addition, the removal efficiencies of COD, volatile hydrobenzenes, suspended solids, turbidity and petroleum-based micropollutants were all above 90%. Competition between the autotrophs and heterotrophs was observed, which was indicated by an increase of ammonia nitrogen removal with a decrease of COD removal, and vise versa. Nitrite accumulation in IBAC1 followed by erobic shortcut denitrification in IBAC2 led to 28% of the Total Nitrogen removal efficiency. Pollutant reduction in the IBAC process was achieved by a rapid physical adsorption and biodegradation on the activated carbon, which effectively retained the pollutants in the system despite the short hydraulic retention time.

  9. Basic electrotechnology

    CERN Document Server

    Ashen, R A

    2013-01-01

    BASIC Electrotechnology discusses the applications of Beginner's All-purpose Symbolic Instruction Code (BASIC) in engineering, particularly in solving electrotechnology-related problems. The book is comprised of six chapters that cover several topics relevant to BASIC and electrotechnology. Chapter 1 provides an introduction to BASIC, and Chapter 2 talks about the use of complex numbers in a.c. circuit analysis. Chapter 3 covers linear circuit analysis with d.c. and sinusoidal a.c. supplies. The book also discusses the elementary magnetic circuit theory. The theory and performance of two windi

  10. Effects of Basicity and MgO in Slag on the Behaviors of Smelting Vanadium Titanomagnetite in the Direct Reduction-Electric Furnace Process

    Directory of Open Access Journals (Sweden)

    Tao Jiang

    2016-05-01

    Full Text Available The effects of basicity and MgO content on reduction behavior and separation of iron and slag during smelting vanadium titanomagnetite by electric furnace were investigated. The reduction behaviors affect the separation of iron and slag in the direct reduction-electric furnace process. The recovery rates of Fe, V, and Ti grades in iron were analyzed to determine the effects of basicity and MgO content on the reduction of iron oxides, vanadium oxides, and titanium oxides. The chemical compositions of vanadium-bearing iron and main phases of titanium slag were detected by XRF and XRD, respectively. The results show that the higher level of basicity is beneficial to the reduction ofiron oxides and vanadium oxides, and titanium content dropped in molten iron with the increasing basicity. As the content of MgO increased, the recovery rate of Fe increased slightly but the recovery rate of V increased considerably. The grades of Ti in molten iron were at a low level without significant change when MgO content was below 11%, but increased as MgO content increased to 12.75%. The optimum conditions for smelting vanadium titanomagnetite were about 11.38% content of MgO and quaternary basicity was about 1.10. The product, vanadium-bearing iron, can be applied in the converter steelmaking process, and titanium slag containing 50.34% TiO2 can be used by the acid leaching method.

  11. On the Language Specificity of Basic Number Processing: Transcoding in a Language with Inversion and Its Relation to Working Memory Capacity

    Science.gov (United States)

    Zuber, Julia; Pixner, Silvia; Moeller, Korbinian; Nuerk, Hans-Christoph

    2009-01-01

    Transcoding Arabic numbers from and into verbal number words is one of the most basic number processing tasks commonly used to index the verbal representation of numbers. The inversion property, which is an important feature of some number word systems (e.g., German "einundzwanzig" [one and twenty]), might represent a major difficulty in…

  12. Biodrying for mechanical-biological treatment of wastes: a review of process science and engineering.

    Science.gov (United States)

    Velis, C A; Longhurst, P J; Drew, G H; Smith, R; Pollard, S J T

    2009-06-01

    Biodrying is a variation of aerobic decomposition, used within mechanical-biological treatment (MBT) plants to dry and partially stabilise residual municipal waste. Biodrying MBT plants can produce a high quality solid recovered fuel (SRF), high in biomass content. Here, process objectives, operating principles, reactor designs, parameters for process monitoring and control, and their effect on biodried output quality are critically examined. Within the biodrying reactors, waste is dried by air convection, the necessary heat provided by exothermic decomposition of the readily decomposable waste fraction. Biodrying is distinct from composting in attempting to dry and preserve most of biomass content of the waste matrix, rather than fully stabilise it. Commercial process cycles are completed within 7-15 days, with mostly H(2)O((g)) and CO(2) loses of ca. 25-30% w/w, leading to moisture contents of MBT process operators, regulators and end-users of SRF. PMID:19216072

  13. Open Markov processes: A compositional perspective on non-equilibrium steady states in biology

    CERN Document Server

    Pollard, Blake S

    2016-01-01

    In recent work, Baez, Fong and the author introduced a framework for describing Markov processes equipped with a detailed balanced equilibrium as open systems of a certain type. These `open Markov processes' serve as the building blocks for more complicated processes. In this paper, we describe the potential application of this framework in the modeling of biological systems as open systems maintained away from equilibrium. We show that non-equilibrium steady states emerge in open systems of this type, even when the rates of the underlying process are such that a detailed balanced equilibrium is permitted. It is shown that these non-equilibrium steady states minimize a quadratic form which we call `dissipation.' In some circumstances, the dissipation is approximately equal to the rate of change of relative entropy plus a correction term. On the other hand, Prigogine's principle of minimum entropy production generally fails for non-equilibrium steady states. We use a simple model of membrane transport to illus...

  14. Mineral CO2 sequestration in basalts and ultra-basic rocks: impact of secondary silicated phases on the carbonation process

    International Nuclear Information System (INIS)

    The formation of carbonates constitutes a stable option for carbon dioxide (CO2) geological sequestration, and is prone to play a significant role in reducing emissions of anthropic origin. However, our comprehension of the carbonation mechanism, as well as of the kinetics limitations encountered during this chemical reaction, remains poorly developed. Though there is a large number of studies focusing on the dissolution kinetics of basic silicates and on the precipitation of carbonates, few have inquired about the impact that the formation of non-carbonated secondary phases can have on these reaction's kinetics. It is the approach chosen here, as only solid knowledge of the global carbonation mechanism can make this process predictive and efficient. Experimental data on dissolution and carbonation have therefore been determined in batch reactors, on relevant minerals and rocks. Firstly, we studied the carbonation of olivine (a major phase within peridotites and minor within basalts) at 90 deg. C and under pCO2 of 280 bars. The dissolution of San Carlos olivine (Mg1.76Fe0.24SiO4) is slowed down by the formation of a surface silica gel, when the fluid reaches equilibrium with amorphous silica. The transport of species to the reactive medium becomes the limiting step of the process, slowing down the dissolution process of San Carlos olivine by 5 orders of magnitude. However, this passivation doesn't occur during the alteration of Ca-olivine (Ca2SiO4), though a surface silica layer does form. This comparison suggests that it isn't the structure of the silicate but its chemical composition, which controls the transport properties through the interfacial layer. The second part explores the effects of organic ligands and of temperature variations on the formation of those phases. The addition of citrate at 90 deg. C increases the kinetics of San Carlos olivine by one order of magnitude, and allows the release of enough Mg in the aqueous medium to form carbonates, before

  15. The role of biological processes in the synthesis of plant origin of magnetic nano particles

    International Nuclear Information System (INIS)

    Full text:In recent years, in various spheres, particular in the use of medicine and the use of iron oxide (magnetit-Fe3O4, magemit Fe2O3) needed in the diagnostics the problems of synthesis of magnetic nano particles are in the centre of the focus of many scholars.The implementation of biological methods of synthesis of magnetic nano particles, it is very urgent clarification of the role of biological processes synthesis of nano particles. What is the role of biological processes in the synthesis of magnetic nano particles plant in order to clarify the model of the wheat (Triticum vulgare) and pea (Cicer arietinum L.) plants and seeds have been used. The study of the effects of radiation on organisms of different types of cell and chromosome levels of various radiation effects and radiation to understand the nature of the influence of the nature of the forecast allows you to substantiate. Chromosome aberation was has been taken in the cells of pea sprout exposures radiation rays as a criterion of cytogenetic effects. EPR studies of the pea and wheat seeds (control and radiations) were used. In accordance with the results of EPR experiments were carried out with pea seeds.

  16. The relative contributions of biological and abiotic processes to carbon dynamics in subarctic sea ice

    DEFF Research Database (Denmark)

    Søgaard, Dorte Haubjerg; Thomas, David; Rysgaard, Søren;

    2013-01-01

    and CaCO3 precipitation. The net biological production could only explain 4 % of this sea-ice-driven CO2 uptake. Abiotic processes contributed to an air-sea CO2 uptake of 1.5 mmol m(-2) sea ice day(-1), and dissolution of CaCO3 increased the air-sea CO2 uptake by 36 % compared to a theoretical estimate......Knowledge on the relative effects of biological activity and precipitation/dissolution of calcium carbonate (CaCO3) in influencing the air-ice CO2 exchange in sea-ice-covered season is currently lacking. Furthermore, the spatial and temporal occurrence of CaCO3 and other biogeochemical parameters...

  17. State of the art of biological processes for coal gasification wastewater treatment.

    Science.gov (United States)

    Zhao, Qian; Liu, Yu

    2016-01-01

    The treatment of coal gasification wastewater (CGW) poses a serious challenge on the sustainable development of the global coal industry. The CGW contains a broad spectrum of high-strength recalcitrant substances, including phenolic, monocyclic and polycyclic aromatic hydrocarbons, heterocyclic nitrogenous compounds and long chain aliphatic hydrocarbon. So far, biological treatment of CGW has been considered as an environment-friendly and cost-effective method compared to physiochemical approaches. Thus, this reviews aims to provide a comprehensive picture of state of the art of biological processes for treating CGW wastewater, while the possible biodegradation mechanisms of toxic and refractory organic substances were also elaborated together with microbial community involved. Discussion was further extended to advanced bioprocesses to tackle high-concentration ammonia and possible options towards in-plant zero liquid discharge. PMID:27364381

  18. Survey of biological processes for odor reduction; Kartlaeggning och studie av biologiska processer foer luktreduktion

    Energy Technology Data Exchange (ETDEWEB)

    Arrhenius, Karine; Rosell, Lars [SP Technical Research Inst. of Sweden, Boraas (Sweden); Hall, Gunnar [SIK Swedish Inst. for Food and Biotechnology, Gothenburg (Sweden)

    2009-09-15

    This project aims to characterize chemical and subsequently odor emissions from a digester plant located closed to Boraas in Sweden (Boraas Energi och Miljoe AB). The digestion produces mainly 2 by-products, biogas and high quality organic biofertilizer. Biogas is a renewable source of electrical and heat energy and subsequently digester have a promising future. Unfortunately, release of unpleasant odours is one of the problems that may limit development of the technique as odours strongly influence the level of acceptance of the neighbours. The number of complaints due to odours depends mostly, upon the degree of odour release, the weather condition and plant environment (which influence the risks for spreading out), and the tolerance of the neighbours. These parameters are strongly variable. Many processes inside the plant distributed on a large surface may contribute to odour release. Chemical emissions were studied, in this project, by extensive sampling inside the plant. Results were then evaluated regarding risk for odour releases. The goal was to suggest controls and routines to limit releases. The conditions leading to the higher risks for odour emissions were studied by performing sampling at different periods of the year and subsequently different weather conditions. At first, places for measurement were chosen together with personal of the plant. Three zones are considered to mainly contribute to the odour emissions: the landfill region, the cisterns region and the leaching lake region. Totally 13 places were studied with regard to odour and chemical emissions under 2008-2009 at different weather conditions. Some results from a previous project (2007) are also presented here. Results show that the spreading out of can be maintained to an acceptable level as long as the plant is functioning without disturbances. The early stages of the treatment of waste should be confined in locals with closed doors to avoid spreading out of odours. Through controlled

  19. POLLUTION EFFECTS OF ABNORMAL OPERATIONS IN IRON AND STEEL MAKING. VOLUME VI. BASIC OXYGEN PROCESS, MANUAL OF PRACTICE

    Science.gov (United States)

    The report is one in a six-volume series considering abnormal operating conditions (AOCs) in the primary section (sintering, blast furnace ironmaking, open hearth, electric furnace, and basic oxygen steelmaking) of an integrated iron and steel plant. Pollution standards, generall...

  20. Basic Need Satisfaction and Identity Formation: Bridging Self-Determination Theory and Process-Oriented Identity Research

    Science.gov (United States)

    Luyckx, Koen; Vansteenkiste, Maarten; Goossens, Luc; Duriez, Bart

    2009-01-01

    The fulfillment of the basic psychological needs for autonomy, competence, and relatedness as postulated within self-determination theory was hypothesized to play an energizing role in identity formation, conceptualized as multiple dimensions of exploration and commitment. Two studies among high school and college students (N = 714) were conducted…

  1. Electrochemical advanced oxidation and biological processes for wastewater treatment: a review of the combined approaches.

    Science.gov (United States)

    Ganzenko, Oleksandra; Huguenot, David; van Hullebusch, Eric D; Esposito, Giovanni; Oturan, Mehmet A

    2014-01-01

    As pollution becomes one of the biggest environmental challenges of the twenty-first century, pollution of water threatens the very existence of humanity, making immediate action a priority. The most persistent and hazardous pollutants come from industrial and agricultural activities; therefore, effective treatment of this wastewater prior to discharge into the natural environment is the solution. Advanced oxidation processes (AOPs) have caused increased interest due to their ability to degrade hazardous substances in contrast to other methods, which mainly only transfer pollution from wastewater to sludge, a membrane filter, or an adsorbent. Among a great variety of different AOPs, a group of electrochemical advanced oxidation processes (EAOPs), including electro-Fenton, is emerging as an environmental-friendly and effective treatment process for the destruction of persistent hazardous contaminants. The only concern that slows down a large-scale implementation is energy consumption and related investment and operational costs. A combination of EAOPs with biological treatment is an interesting solution. In such a synergetic way, removal efficiency is maximized, while minimizing operational costs. The goal of this review is to present cutting-edge research for treatment of three common and problematic pollutants and effluents: dyes and textile wastewater, olive processing wastewater, and pharmaceuticals and hospital wastewater. Each of these types is regarded in terms of recent scientific research on individual electrochemical, individual biological and a combined synergetic treatment. PMID:24965093

  2. Removal of disinfection by-products formation potential by biologically intensified process

    Institute of Scientific and Technical Information of China (English)

    AN Dong; LI Wei-guang; CUI Fu-yi; HE Xin; ZHANG Jin-song

    2005-01-01

    The removal of disinfection by-products formation potential(DBPFP) in artificially intensified biological activated carbon(IBAC) process which is developed on the basis of traditional ozone granular activated carbon was evaluated. By IBAC removals of 31% and 68% for THMFP and HAAFP were obtained respectively. Under identical conditions, the removals of the same substances were 4% and 32% respectively only by the granular activated carbon(GAC) process. Compared with GAC, the high removal rates of the two formed potential substances were due to the increasing of bioactivity of the media and the synergistic capabilities of biological degradation cooperating with activated carbon adsorption of organic compounds. A clear linear correlation ( R2 = 0.9562 and R2 = 0.9007) between DOC HAAFP removal rate and Empty Bed Contact Time(EBCT) of IBAC process was observed, while that between THMFP removal rate and EBCT of GAC was R2 = 0.9782. In addition certain linear correlations between THMFP, HAAFP and UV254 ( R2 = 0.855 and R2 = 0.7702) were found for the treated water. For IBAC process there are also more advantages such as long backwashing cycle time, low backwashing intensity and prolonging activated carbon lifetime and so on.

  3. Brain Basics

    Medline Plus

    Full Text Available ... in Real Life Brain Research Glossary Brain Basics (PDF, 10 pages) Introduction Watch the Brain Basics video ... early brain development, and may also assist in learning and memory. ... rise to disabilities or diseases. neural circuit —A network of neurons ...

  4. Brain Basics

    Medline Plus

    Full Text Available ... pituitary-adrenal (HPA) axis. Brain Basics in Real Life Brain Basics in Real Life—How Depression affects the Brain Meet Sarah Sarah ... having trouble coping with the stresses in her life. She began to think of suicide because she ...

  5. Brain Basics

    Medline Plus

    Full Text Available ... Basics will introduce you to some of this science, such as: How the brain develops How genes and the environment affect the brain The basic structure of the brain How different parts of the brain communicate and work with each other How changes in the brain ...

  6. Brain Basics

    Medline Plus

    Full Text Available ... Basics in Real Life Brain Basics in Real Life—How Depression affects the Brain Meet Sarah Sarah is a middle-aged woman who seemed to have it all. She was happily married and successful in business. Then, after a serious setback at work, she lost interest ...

  7. BASIC Programming.

    Science.gov (United States)

    Jennings, Carol Ann

    Designed for use by both secondary- and postsecondary-level business teachers, this curriculum guide consists of 10 units of instructional materials dealing with Beginners All-Purpose Symbol Instruction Code (BASIC) programing. Topics of the individual lessons are numbering BASIC programs and using the PRINT, END, and REM statements; system…

  8. Brain Basics

    Medline Plus

    Full Text Available ... Basics in Real Life Brain Basics in Real Life—How Depression affects the Brain Meet Sarah Sarah is a ... medical history. Epigenetic changes from stress or early-life experiences ... In contrast, major depression is a serious disorder that lasts for weeks. ...

  9. Is biological treatment a viable alternative for micropollutant removal in drinking water treatment processes?

    Science.gov (United States)

    Benner, Jessica; Helbling, Damian E; Kohler, Hans-Peter E; Wittebol, Janneke; Kaiser, Elena; Prasse, Carsten; Ternes, Thomas A; Albers, Christian N; Aamand, Jens; Horemans, Benjamin; Springael, Dirk; Walravens, Eddy; Boon, Nico

    2013-10-15

    In western societies, clean and safe drinking water is often taken for granted, but there are threats to drinking water resources that should not be underestimated. Contamination of drinking water sources by anthropogenic chemicals is one threat that is particularly widespread in industrialized nations. Recently, a significant amount of attention has been given to the occurrence of micropollutants in the urban water cycle. Micropollutants are bioactive and/or persistent chemicals originating from diverse sources that are frequently detected in water resources in the pg/L to μg/L range. The aim of this review is to critically evaluate the viability of biological treatment processes as a means to remove micropollutants from drinking water resources. We first place the micropollutant problem in context by providing a comprehensive summary of the reported occurrence of micropollutants in raw water used directly for drinking water production and in finished drinking water. We then present a critical discussion on conventional and advanced drinking water treatment processes and their contribution to micropollutant removal. Finally, we propose biological treatment and bioaugmentation as a potential targeted, cost-effective, and sustainable alternative to existing processes while critically examining the technical limitations and scientific challenges that need to be addressed prior to implementation. This review will serve as a valuable source of data and literature for water utilities, water researchers, policy makers, and environmental consultants. Meanwhile this review will open the door to meaningful discussion on the feasibility and application of biological treatment and bioaugmentation in drinking water treatment processes to protect the public from exposure to micropollutants. PMID:24053940

  10. Noise in biology

    International Nuclear Information System (INIS)

    Noise permeates biology on all levels, from the most basic molecular, sub-cellular processes to the dynamics of tissues, organs, organisms and populations. The functional roles of noise in biological processes can vary greatly. Along with standard, entropy-increasing effects of producing random mutations, diversifying phenotypes in isogenic populations, limiting information capacity of signaling relays, it occasionally plays more surprising constructive roles by accelerating the pace of evolution, providing selective advantage in dynamic environments, enhancing intracellular transport of biomolecules and increasing information capacity of signaling pathways. This short review covers the recent progress in understanding mechanisms and effects of fluctuations in biological systems of different scales and the basic approaches to their mathematical modeling. (review article)

  11. Kinetic analysis of enhanced biological phosphorus removal in a hybrid integrated fixed film activated sludge process

    International Nuclear Information System (INIS)

    Hybrid integrated fixed film activated sludge is a promising process for the enhancement of nitrification, denitrification and phosphorus removal in conventional activated sludge systems that can be used for upgrading biological nutrient removal, particularly when they have space limitations or need modifications that will require large monetary expenses. In this research, successful implementation of hybrid integrated fixed film activated sludge process at temperate zone wastewater treatment facilities has been studied by the placement of fixed film media into aerobic, anaerobic and anoxic zones. The primary objective of this study was to investigate the incorporation of enhanced biological phosphorus removal into hybrid integrated fixed film activated sludge systems and study the interactions between the fixed biomass and the mixed liquor suspended solids with respect to substrate competition and nutrient removal efficiencies. A pilot-scale anaerobic-anoxic-oxic configuration system was used. The system was operated at different mean cell residence times and influent chemical oxygen demand/total phosphorus ratios and with split influent flows. The experimental results confirmed that enhanced biological phosphorus removal could be incorporated successfully into hybrid integrated fixed film activated sludge system, but the redistribution of biomass resulting from the integration of fixed film media and the competition of organic substrate between enhanced biological phosphorus removal and denitrification would affect performances. Also, kinetic analysis of the reactor with regarding to phosphorus removal has been studied with different kinetic models and consequently the modified Stover-Kincannon kinetic model has been chosen for modeling studies and experimental data analysis of the hybrid integrated fixed film activated sludge reactor

  12. dNSP: a biologically inspired dynamic Neural network approach to Signal Processing.

    Science.gov (United States)

    Cano-Izquierdo, José Manuel; Ibarrola, Julio; Pinzolas, Miguel; Almonacid, Miguel

    2008-09-01

    The arriving order of data is one of the intrinsic properties of a signal. Therefore, techniques dealing with this temporal relation are required for identification and signal processing tasks. To perform a classification of the signal according with its temporal characteristics, it would be useful to find a feature vector in which the temporal attributes were embedded. The correlation and power density spectrum functions are suitable tools to manage this issue. These functions are usually defined with statistical formulation. On the other hand, in biology there can be found numerous processes in which signals are processed to give a feature vector; for example, the processing of sound by the auditory system. In this work, the dNSP (dynamic Neural Signal Processing) architecture is proposed. This architecture allows representing a time-varying signal by a spatial (thus statical) vector. Inspired by the aforementioned biological processes, the dNSP performs frequency decomposition using an analogical parallel algorithm carried out by simple processing units. The architecture has been developed under the paradigm of a multilayer neural network, where the different layers are composed by units whose activation functions have been extracted from the theory of Neural Dynamic [Grossberg, S. (1988). Nonlinear neural networks principles, mechanisms and architectures. Neural Networks, 1, 17-61]. A theoretical study of the behavior of the dynamic equations of the units and their relationship with some statistical functions allows establishing a parallelism between the unit activations and correlation and power density spectrum functions. To test the capabilities of the proposed approach, several testbeds have been employed, i.e. the frequencial study of mathematical functions. As a possible application of the architecture, a highly interesting problem in the field of automatic control is addressed: the recognition of a controlled DC motor operating state. PMID:18579344

  13. Intended process water management concept for the mechanical biological treatment of municipal solid waste

    Institute of Scientific and Technical Information of China (English)

    D. Weichgrebe; S. Maerker; T. Boning; H. Stegemann

    2008-01-01

    Accumulating operational experience in both aerobic and anaerobic mechanical biological waste treatment (MBT) makes it increasingly obvious that controlled water management would substantially reduce the cost of MBT and also enhance resource recovery of the organic and inorganic fraction. The MBT plant at Gescher, Germany, is used as an example in order to determine the quantity and composition of process water and leachates from intensive and subsequent rotting, pressing water from anaerobic digestion and scrubber water from acid exhaust air treatment, and hence prepare an MBT water balance. The potential of, requirements for and limits to internal process water reuse as well as the possibilities of resource recovery from scrubber water are also examined. Finally, an assimilated process water management concept with the purpose of an extensive reduction of wastewater quantity and freshwater demand is presented.

  14. Treatment of Slightly Polluted Wastewater in an Oil Refinery Using a Biological Aerated Filter Process

    Institute of Scientific and Technical Information of China (English)

    XIE Wenyu; ZHONG Li; CHEN Jianjun

    2007-01-01

    The slightly polluted wastewater from oil refinery contains some COD, oil pollutants and suspended solids (SS). A small-scale fixed film biological aerated filter (BAF) process was used to treat the wastewater. The influences of hydraulic retention time (HRT), air/water volume flow ratio and backwashing cycle on treatment efficiencies were investigated. The wastewater was treated by the BAF process under optimal conditions: the HRT of backwashing cycle of every 4-7 days. The results showed that the average removal efficiency of COD, oil pollutants and SS was 84.5%, 94.0% and 83.4%, respectively. And the average effluent concentration of COD, oil pollutants and SS was 12.5, 0.27, 14.5the BAF process is a suitable and highly efficient method to treat the wastewater.

  15. Intended process water management concept for the mechanical biological treatment of municipal solid waste

    Directory of Open Access Journals (Sweden)

    D. Weichgrebe

    2008-03-01

    Full Text Available Accumulating operational experience in both aerobic and anaerobic mechanical biological waste treatment (MBT makes it increasingly obvious that controlled water management would substantially reduce the cost of MBT and also enhance resource recovery of the organic and inorganic fraction. The MBT plant at Gescher, Germany, is used as an example in order to determine the quantity and composition of process water and leachates from intensive and subsequent rotting, pressing water from anaerobic digestion and scrubber water from acid exhaust air treatment, and hence prepare an MBT water balance. The potential of, requirements for and limits to internal process water reuse as well as the possibilities of resource recovery from scrubber water are also examined. Finally, an assimilated process water management concept with the purpose of an extensive reduction of wastewater quantity and freshwater demand is presented.

  16. Reduction of overestimation in interval arithmetic simulation of biological wastewater treatment processes

    Science.gov (United States)

    Rauh, Andreas; Kletting, Marco; Aschemann, Harald; Hofer, Eberhard P.

    2007-02-01

    A novel interval arithmetic simulation approach is introduced in order to evaluate the performance of biological wastewater treatment processes. Such processes are typically modeled as dynamical systems where the reaction kinetics appears as additive nonlinearity in state. In the calculation of guaranteed bounds of state variables uncertain parameters and uncertain initial conditions are considered. The recursive evaluation of such systems of nonlinear state equations yields overestimation of the state variables that is accumulating over the simulation time. To cope with this wrapping effect, innovative splitting and merging criteria based on a recursive uncertain linear transformation of the state variables are discussed. Additionally, re-approximation strategies for regions in the state space calculated by interval arithmetic techniques using disjoint subintervals improve the simulation quality significantly if these regions are described by several overlapping subintervals. This simulation approach is used to find a practical compromise between computational effort and simulation quality. It is pointed out how these splitting and merging algorithms can be combined with other methods that aim at the reduction of overestimation by applying consistency techniques. Simulation results are presented for a simplified reduced-order model of the reduction of organic matter in the activated sludge process of biological wastewater treatment.

  17. Potential biological hazard of importance for HACCP plans in fresh fish processing

    Directory of Open Access Journals (Sweden)

    Baltić Milan Ž.

    2009-01-01

    Full Text Available The Hazard Analysis and Critical Control Point (HACCP system is scientifically based and focused on problem prevention in order to assure the produced food products are safe to consume. Prerequisite programs such as GMP (Good Manufacturing Practices, GHP (Good Hygienic Practices are an essential foundation for the development and implementation of successful HACCP plans. One of the preliminary tasks in the development of HACCP plan is to conduct a hazard analysis. The process of conducting a hazard analysis involves two stages. The first is hazard identification and the second stage is the HACCP team decision which potential hazards must be addressed in the HACCP plan. By definition, the HACCP concept covers all types of potential food safety hazards: biological, chemical and physical, whether they are naturally occurring in the food, contributed by the environment or generated by a mistake in the manufacturing process. In raw fish processing, potential significant biological hazards which are reasonably likely to cause illness of humans are parasites (Trematodae, Nematodae, Cestodae, bacteria (Salmonella, E. coli, Vibrio parahemolyticus, Vibrio vulnificus, Listeria monocytogenes, Clostridium botulinum, Staphyloccocus aureus, viruses (Norwalk virus, Entero virusesi, Hepatitis A, Rotovirus and bio-toxins. Upon completion of hazard analysis, any measure(s that are used to control the hazard(s should be described.

  18. Combination of Advanced Oxidation Processes and biological treatments for wastewater decontamination--a review.

    Science.gov (United States)

    Oller, I; Malato, S; Sánchez-Pérez, J A

    2011-09-15

    Nowadays there is a continuously increasing worldwide concern for development of alternative water reuse technologies, mainly focused on agriculture and industry. In this context, Advanced Oxidation Processes (AOPs) are considered a highly competitive water treatment technology for the removal of those organic pollutants not treatable by conventional techniques due to their high chemical stability and/or low biodegradability. Although chemical oxidation for complete mineralization is usually expensive, its combination with a biological treatment is widely reported to reduce operating costs. This paper reviews recent research combining AOPs (as a pre-treatment or post-treatment stage) and bioremediation technologies for the decontamination of a wide range of synthetic and real industrial wastewater. Special emphasis is also placed on recent studies and large-scale combination schemes developed in Mediterranean countries for non-biodegradable wastewater treatment and reuse. The main conclusions arrived at from the overall assessment of the literature are that more work needs to be done on degradation kinetics and reactor modeling of the combined process, and also dynamics of the initial attack on primary contaminants and intermediate species generation. Furthermore, better economic models must be developed to estimate how the cost of this combined process varies with specific industrial wastewater characteristics, the overall decontamination efficiency and the relative cost of the AOP versus biological treatment. PMID:20956012

  19. Nanomaterial processing using self-assembly-bottom-up chemical and biological approaches

    International Nuclear Information System (INIS)

    Nanotechnology is touted as the next logical sequence in technological evolution. This has led to a substantial surge in research activities pertaining to the development and fundamental understanding of processes and assembly at the nanoscale. Both top-down and bottom-up fabrication approaches may be used to realize a range of well-defined nanostructured materials with desirable physical and chemical attributes. Among these, the bottom-up self-assembly process offers the most realistic solution toward the fabrication of next-generation functional materials and devices. Here, we present a comprehensive review on the physical basis behind self-assembly and the processes reported in recent years to direct the assembly of nanoscale functional blocks into hierarchically ordered structures. This paper emphasizes assembly in the synthetic domain as well in the biological domain, underscoring the importance of biomimetic approaches toward novel materials. In particular, two important classes of directed self-assembly, namely, (i) self-assembly among nanoparticle–polymer systems and (ii) external field-guided assembly are highlighted. The spontaneous self-assembling behavior observed in nature that leads to complex, multifunctional, hierarchical structures within biological systems is also discussed in this review. Recent research undertaken to synthesize hierarchically assembled functional materials have underscored the need as well as the benefits harvested in synergistically combining top-down fabrication methods with bottom-up self-assembly. (review article)

  20. Combination of Advanced Oxidation Processes and biological treatments for wastewater decontamination-A review

    International Nuclear Information System (INIS)

    Nowadays there is a continuously increasing worldwide concern for development of alternative water reuse technologies, mainly focused on agriculture and industry. In this context, Advanced Oxidation Processes (AOPs) are considered a highly competitive water treatment technology for the removal of those organic pollutants not treatable by conventional techniques due to their high chemical stability and/or low biodegradability. Although chemical oxidation for complete mineralization is usually expensive, its combination with a biological treatment is widely reported to reduce operating costs. This paper reviews recent research combining AOPs (as a pre-treatment or post-treatment stage) and bioremediation technologies for the decontamination of a wide range of synthetic and real industrial wastewater. Special emphasis is also placed on recent studies and large-scale combination schemes developed in Mediterranean countries for non-biodegradable wastewater treatment and reuse. The main conclusions arrived at from the overall assessment of the literature are that more work needs to be done on degradation kinetics and reactor modeling of the combined process, and also dynamics of the initial attack on primary contaminants and intermediate species generation. Furthermore, better economic models must be developed to estimate how the cost of this combined process varies with specific industrial wastewater characteristics, the overall decontamination efficiency and the relative cost of the AOP versus biological treatment.

  1. Basic hydraulics

    CERN Document Server

    Smith, P D

    2013-01-01

    BASIC Hydraulics aims to help students both to become proficient in the BASIC programming language by actually using the language in an important field of engineering and to use computing as a means of mastering the subject of hydraulics. The book begins with a summary of the technique of computing in BASIC together with comments and listing of the main commands and statements. Subsequent chapters introduce the fundamental concepts and appropriate governing equations. Topics covered include principles of fluid mechanics; flow in pipes, pipe networks and open channels; hydraulic machinery;

  2. Treatment of waste metalworking fluid by a hybrid ozone-biological process.

    Science.gov (United States)

    Jagadevan, Sheeja; Graham, Nigel J; Thompson, Ian P

    2013-01-15

    In metal machining processes, the regulation of heat generation and lubrication at the contact point are achieved by application of a fluid referred to as metalworking fluid (MWF). MWFs inevitably become operationally exhausted with age and intensive use, which leads to compromised properties, thereby necessitating their safe disposal. Disposal of this waste through a biological route is an increasingly attractive option, since it is effective with relatively low energy demands. However, successful biological treatment is challenging since MWFs are chemically complex, and include biocides specifically to retard microbial deterioration whilst the fluids are operational. In this study remediation of the recalcitrant component of a semi-synthetic MWF by a novel hybrid ozone-bacteriological treatment, was investigated. The hybrid treatment proved to be effective and reduced the chemical oxygen demand by 72% (26.9% and 44.9% reduction after ozonation and biological oxidation respectively). Furthermore, a near-complete degradation of three non-biodegradable compounds (viz. benzotriazole, monoethanolamine, triethanolamine), commonly added as biocides and corrosion inhibitors in MWF formulations, under ozonation was observed. PMID:23274939

  3. Principles for integrating reactive species into in vivo biological processes: Examples from exercise physiology.

    Science.gov (United States)

    Margaritelis, Nikos V; Cobley, James N; Paschalis, Vassilis; Veskoukis, Aristidis S; Theodorou, Anastasios A; Kyparos, Antonios; Nikolaidis, Michalis G

    2016-04-01

    The equivocal role of reactive species and redox signaling in exercise responses and adaptations is an example clearly showing the inadequacy of current redox biology research to shed light on fundamental biological processes in vivo. Part of the answer probably relies on the extreme complexity of the in vivo redox biology and the limitations of the currently applied methodological and experimental tools. We propose six fundamental principles that should be considered in future studies to mechanistically link reactive species production to exercise responses or adaptations: 1) identify and quantify the reactive species, 2) determine the potential signaling properties of the reactive species, 3) detect the sources of reactive species, 4) locate the domain modified and verify the (ir)reversibility of post-translational modifications, 5) establish causality between redox and physiological measurements, 6) use selective and targeted antioxidants. Fulfilling these principles requires an idealized human experimental setting, which is certainly a utopia. Thus, researchers should choose to satisfy those principles, which, based on scientific evidence, are most critical for their specific research question. PMID:26721187

  4. Influence of physical and chemical factors on biological leaching process of copper from printed circuit boards

    Directory of Open Access Journals (Sweden)

    J. Willner

    2013-04-01

    Full Text Available The article presents the results of the research regarding the biological leaching of this metal from electronic wastes components in the form of printed circuit boards. The purpose of the study was to evaluate the influence of some physical and chemical factors (e.g. pH, oxidation-reduction potential on bioleaching process and efficiency of copper transfer from solid phase into solution. Bioleaching experiments were carried out with pure cultures of Acidithiobacillus ferrooxidans. The obtained results were discussed.

  5. Antibiotic abatement in different advanced oxidation processes coupled with a biological sequencing batch biofilm reactor

    International Nuclear Information System (INIS)

    During the last decade, the lack of fresh water is becoming a major concern. Recently, the present of recalcitrant products such as pharmaceuticals has caused a special interest due to their undefined environmental impact. Among these antibiotics are one of the numerous recalcitrant pollutants present in surface waters that might not be completely removed in the biological stage of sewage treatment plants because of their antibacterial nature. Advanced Oxidation Processes (AOPs) have proved to be highly efficient for the degradation of most organic pollutants in wastewaters. (Author)

  6. Theoretical study of the molecular bases that control photochemical processes with biological and nanotechnological interest

    OpenAIRE

    Saurí Peris, Vicenta

    2013-01-01

    El trabajo desarrollado en la tesis doctoral que lleva por título "Theoretical study of the molecular bases that control photochemical processes with biological and nanotechnological interest" se enmarca en las líneas de investigación del grupo QCEXVAL (Quantum Chemistry of the Excited State University of Valencia), que nació en el seno del departamento de Química Física de la Universitat de València en 1993. Se han abordado temas de interés metodológico, biológico y nanotecnológico. La prime...

  7. Composting of the solid fraction of digestate derived from pig slurry: Biological processes and compost properties

    Energy Technology Data Exchange (ETDEWEB)

    Tambone, Fulvia, E-mail: fulvia.tambone@unimi.it; Terruzzi, Laura; Scaglia, Barbara; Adani, Fabrizio

    2015-01-15

    Highlights: • Anaerobic digestion leads to the production of a biologically stable digestate. • Solid–liquid separation produces a solid fraction having high fertilizer value. • Composting process shows low biological activity due to high biological stability of digestate. • Solid digestate fraction can be composted in a short time or used directly as organic fertilizer. - Abstract: The aim of this paper was to assess the characteristics of the solid fractions (SF) obtained by mechanical separation of digestate, their compostability and compost quality. To do so, the SF of digestates obtained from anaerobic digestion of pig slurry, energy crops and agro-industrial residues were sampled in five plants located in Northern Italy. Results obtained indicated that anaerobic digestion by itself promoted the high biological stability of biomasses with a Potential Dynamic Respiration Index (PDRI) close to 1000 mgO{sub 2} kg V S{sup −1} h{sup −1}. Subsequent composting of digestates, with an added bulking agent, did not give remarkably different results, and led only to a slight modification of the characteristics of the initial non-composted mixtures; the composts obtained fully respected the legal limits for high quality compost. Chemical studies of organic matter composition of the biomasses by using CP MAS {sup 13}C NMR, indicated that the compost was composed of a high relative content of O-alkyl-C (71.47% of total C) (cellulose and hemicelluloses) and a low alkyl-C (12.42%) (i.e. volatile fatty acids, steroid-like molecules, aliphatic biopolymers and proteins)

  8. Composting of the solid fraction of digestate derived from pig slurry: Biological processes and compost properties

    International Nuclear Information System (INIS)

    Highlights: • Anaerobic digestion leads to the production of a biologically stable digestate. • Solid–liquid separation produces a solid fraction having high fertilizer value. • Composting process shows low biological activity due to high biological stability of digestate. • Solid digestate fraction can be composted in a short time or used directly as organic fertilizer. - Abstract: The aim of this paper was to assess the characteristics of the solid fractions (SF) obtained by mechanical separation of digestate, their compostability and compost quality. To do so, the SF of digestates obtained from anaerobic digestion of pig slurry, energy crops and agro-industrial residues were sampled in five plants located in Northern Italy. Results obtained indicated that anaerobic digestion by itself promoted the high biological stability of biomasses with a Potential Dynamic Respiration Index (PDRI) close to 1000 mgO2 kg V S−1 h−1. Subsequent composting of digestates, with an added bulking agent, did not give remarkably different results, and led only to a slight modification of the characteristics of the initial non-composted mixtures; the composts obtained fully respected the legal limits for high quality compost. Chemical studies of organic matter composition of the biomasses by using CP MAS 13C NMR, indicated that the compost was composed of a high relative content of O-alkyl-C (71.47% of total C) (cellulose and hemicelluloses) and a low alkyl-C (12.42%) (i.e. volatile fatty acids, steroid-like molecules, aliphatic biopolymers and proteins)

  9. Brain Basics

    Medline Plus

    Full Text Available ... The Growing Brain Inside the Brain: Neurons & Neural Circuits Neurons are the basic working unit of the ... distant nerve cells (via axons) to form brain circuits. These circuits control specific body functions such as ...

  10. Brain Basics

    Medline Plus

    Full Text Available ... the anatomy, physiology, and chemistry of the nervous system. When the brain cannot effectively coordinate the billions ... basic working unit of the brain and nervous system. These cells are highly specialized for the function ...

  11. Brain Basics

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    Full Text Available ... News About Us Home > Health & Education > Educational Resources Brain Basics Introduction The Growing Brain The Working Brain ... to mental disorders, such as depression. The Growing Brain Inside the Brain: Neurons & Neural Circuits Neurons are ...

  12. Brain Basics

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    Full Text Available ... Trials — Participants Statistics Help for Mental Illnesses Outreach Research Priorities Funding Labs at NIMH News About Us Home > Health & Education > Educational Resources Brain Basics Introduction The Growing Brain The ...

  13. Brain Basics

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    Full Text Available ... Brain Basics will introduce you to some of this science, such as: How the brain develops How ... cell, and responds to signals from the environment; this all helps the cell maintain its balance with ...

  14. Brain Basics

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    Full Text Available ... Life Brain Basics in Real Life—How Depression affects the Brain Meet Sarah Sarah is a middle- ... However, recent research points to a possible new class of antidepressants that can relieve symptoms of the ...

  15. Brain Basics

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    Full Text Available ... for the function of conducting messages. A neuron has three basic parts: Cell body which includes the ... disorder (ADHD) . Glutamate —the most common neurotransmitter, glutamate has many roles throughout the brain and nervous system. ...

  16. Brain Basics

    Medline Plus

    Full Text Available ... Brain Basics provides information on how the brain works, how mental illnesses are disorders of the brain, ... others live with symptoms of mental illness every day. They can be moderate, or serious and cause ...

  17. Brain Basics

    Science.gov (United States)

    ... News About Us Home > Health & Education > Educational Resources Brain Basics Introduction The Growing Brain The Working Brain ... to mental disorders, such as depression. The Growing Brain Inside the Brain: Neurons & Neural Circuits Neurons are ...

  18. Brain Basics

    Medline Plus

    Full Text Available ... the function of conducting messages. A neuron has three basic parts: Cell body which includes the nucleus, ... Plan in 2016 August 31, 2016, 2:00-3:00 PM ET Recovery Month September 2016 National ...

  19. Basic Finance

    Science.gov (United States)

    Vittek, J. F.

    1972-01-01

    A discussion of the basic measures of corporate financial strength, and the sources of the information is reported. Considered are: balance sheet, income statement, funds and cash flow, and financial ratios.

  20. Cancer Basics

    Science.gov (United States)

    ... Cancer? Breast Cancer Colon/Rectum Cancer Lung Cancer Prostate Cancer Skin Cancer Show All Cancer Types News and Features Cancer Glossary ACS Bookstore Cancer Information Cancer Basics Cancer Prevention & Detection Signs & Symptoms of Cancer Treatments & Side Effects ...

  1. Brain Basics

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    Full Text Available ... Brain Basics provides information on how the brain works, how mental illnesses are disorders of the brain, ... learning more about how the brain grows and works in healthy people, and how normal brain development ...

  2. Blood Basics

    Science.gov (United States)

    ... Patient Group Links Advocacy Toolkit Home For Patients Blood Basics Blood is a specialized body fluid. It ... about 9 pints. Jump To: The Components of Blood and Their Importance Many people have undergone blood ...

  3. Brain Basics

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    Full Text Available ... Real Life Brain Basics in Real Life—How Depression affects the Brain Meet Sarah Sarah is a ... volunteers PubMed Central: An archive of life sciences journals NIH Research Fact Sheets NIH Office of Science ...

  4. Brain Basics

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    Full Text Available ... How the brain develops How genes and the environment affect the brain The basic structure of the ... inside contents of the cell from its surrounding environment and controls what enters and leaves the cell, ...

  5. Brain Basics

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    Full Text Available ... and the environment affect the brain The basic structure of the brain How different parts of the ... for the cell to work properly including small structures called cell organelles. Dendrites branch off from the ...

  6. Brain Basics

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    Full Text Available ... science, such as: How the brain develops How genes and the environment affect the brain The basic ... that with brain development in people mental disorders. Genes and environmental cues both help to direct this ...

  7. Brain Basics

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    Full Text Available ... Real Life Brain Basics in Real Life—How Depression affects the Brain Meet Sarah Sarah is a ... blues" from time to time. In contrast, major depression is a serious disorder that lasts for weeks. ...

  8. Body Basics

    Science.gov (United States)

    ... about how the body works, what basic human anatomy is, and what happens when parts of the body don't function properly. Blood Bones, Muscles, and Joints Brain and Nervous System Digestive System Endocrine System Eyes Female Reproductive System ...

  9. Brain Basics

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    Full Text Available ... Health & Education Mental Health Information Publications Educational Resources Clinical Trials — Participants Statistics Help for Mental Illnesses Outreach Research Priorities Funding Labs at NIMH News About Us Home > Health & Education > Educational Resources Brain Basics Introduction ...

  10. Comparing biological and thermochemical processing of sugarcane bagasse: An energy balance perspective

    International Nuclear Information System (INIS)

    The technical performance of lignocellulosic enzymatic hydrolysis and fermentation versus pyrolysis processes for sugarcane bagasse was evaluated, based on currently available technology. Process models were developed for bioethanol production from sugarcane bagasse using three different pretreatment methods, i.e. dilute acid, liquid hot water and steam explosion, at various solid concentrations. Two pyrolysis processes, namely fast pyrolysis and vacuum pyrolysis, were considered as alternatives to biological processing for the production of biofuels from sugarcane bagasse. For bioethanol production, a minimum of 30% solids in the pretreatment reactor was required to render the process energy self-sufficient, which led to a total process energy demand equivalent to roughly 40% of the feedstock higher heating value. Both vacuum pyrolysis and fast pyrolysis could be operated as energy self-sufficient if 45% of the produced char from fast pyrolysis is used to fuel the process. No char energy is required to fuel the vacuum pyrolysis process due to lower process energy demands (17% compared to 28% of the feedstock higher heating value). The process models indicated that effective process heat integration can result in a 10-15% increase in all process energy efficiencies. Process thermal efficiencies between 52 and 56% were obtained for bioethanol production at pretreatment solids at 30% and 50%, respectively, while the efficiencies were 70% for both pyrolysis processes. The liquid fuel energy efficiency of the best bioethanol process is 41%, while that of crude bio-oil production before upgrading is 67% and 56% via fast and vacuum pyrolysis, respectively. Efficiencies for pyrolysis processes are expected to decrease by up to 15% should upgrade to a transportation fuel of equivalent quality to bioethanol be taken into consideration. -- Highlights: → Liquid biofuels can be produced via lignocellulosic enzymatic hydrolysis and fermentation or pyrolysis. → A minimum of

  11. Research on rural sewage treatment using biological-ecological coupling process

    Directory of Open Access Journals (Sweden)

    Chang SHI

    2016-02-01

    Full Text Available Developing low-investment, low-energy consumption and low-maintenance sewage treatment process is important for sewage treatment in rural areas. An upflow anaerobic filter (UAF without energy consumption and a subsurface flow wetland (SFW are utilized as a biological-ecological coupling process to treat rural domestic sewage. The effect of the coupling process on treatment performance of domestic sewage under different hydraulic retention time (HRT is investigated. The removal of nitrogen and phosphorus in the SFW is improved by increasing plant density. The results show that the coupling process of UAF and SFW has no power consumption and is maintenance-free, suitable for rural sewage treatment; the removal of nitrogen and phosphorus mainly happens in the SFW phase; increasing the density of reed plants in the SFW can obviously enhance the capacity to remove nitrogen and phosphorus, and ensure that the efficient performance of the coupling process of UAF and SFW is stabilized in a high level. When the HRTs of UAF and SFW are 18 h and 3 d, respectively, the concentrations of COD, ammonia nitrogen, total nitrogen and total phosphorus in the final effluent treated by UAF and SFW process are 44.07, 4.25, 13.36 and 0.44 mg/L, respectively, meeting the requirement of first grade class A in Discharge Standard of Pollutants for Municipal Wastewater Treatment Plant (GB 18918-2002.

  12. Diagnosis and optimization of the composting process in full-scale mechanical-biological treatment plants.

    Science.gov (United States)

    Baptista, Marco; Antunes, Fernando; Silveira, Ana

    2011-06-01

    The aims of this study were (i) to evaluate the performance of the composting process operation in full-scale mechanical-biological treatment (MBT) plants, (ii) to estimate their performance under optimized conditions and (iii) to propose specific guidelines on how to improve the efficiency of the composting process. To fulfil these objectives, a first-order kinetic model was used. This model was calibrated with experimental data to account for the limitations imposed by less-than-optimal environmental conditions during operation of the composting process. Data treatment and simulation showed that two of the three MBT plants studied were poorly operated. Optimization of process management with measures of simple practical implementation was estimated to be highly significant in these poorly managed plants, increasing performance by 103% in MBT1 and 53% in MBT2. In MBT3, the potential for optimization was estimated at 17%. Similar results were obtained from the analysis of other published data, suggesting that poor process management in MBT composting is widespread. These findings highlight the importance of having programmes for monitoring and optimizing process performance in full-scale composting systems. The procedures developed here are simple to apply and can routinely be implemented in full-scale plants. PMID:21216924

  13. Techno-economic evaluation of a two-step biological process for hydrogen production.

    Science.gov (United States)

    Ljunggren, Mattias; Zacchi, Guido

    2010-01-01

    An integrated biological process for the production of hydrogen based on thermophilic and photo-heterotrophic fermentation was evaluated from a technical and economic standpoint. Besides the two fermentation steps the process also includes pretreatment of the raw material (potato steam peels) and purification of hydrogen using amine absorption. The study aimed neither at determining the absolute cost of biohydrogen nor at an economic optimization of the production process, but rather at studying the effects of different parameters on the production costs of biohydrogen as a guideline for future improvements. The effect of the key parameters, hydrogen productivity and yield and substrate concentration in the two fermentations on the cost of the hydrogen produced was studied. The selection of the process conditions was based mainly on laboratory data. The process was simulated by use of the software Aspen Plus and the capital costs were estimated using the program Aspen Icarus Process Evaluator. The study shows that the photo-fermentation is the main contributor to the hydrogen production cost mainly because of the cost of plastic tubing, for the photo-fermentors, which represents 40.5% of the hydrogen production cost. The costs of the capital investment and chemicals were also notable contributors to the hydrogen production cost. Major economic improvements could be achieved by increasing the productivity of the two fermentation steps on a medium-term to long-term scale. PMID:20039381

  14. Advances in wastewater nitrogen removal by biological processes: state of the art review

    Directory of Open Access Journals (Sweden)

    Andrea G. Capodaglio

    2016-04-01

    Full Text Available The paper summarizes the state-of-the-art of the most recent advances in biological nitrogen removal, including process design criteria and technological innovations. With reference to the Modified Ludzck Ettinger (MLE process (pre-denitrification and nitrification in the activated sludge process, the most common nitrogen removal process used nowadays, a new design equation for the denitrification reactor based on specific denitrification rate (SDNR has been proposed. In addition, factors influencing SDNR (DO in the anoxic reactor; hydrodynamic behavior are analyzed, and technological solutions are proposed. Concerning technological advances, the paper presents a summary of various “deammonification” processes, better known by their patent names like ANAMMOX®, DEMON®, CANON®, ANITA® and others. These processes have already found applications in the treatment of high-strength wastewater such as digested sludge liquor and landfill leachate. Among other emerging denitrification technologies, consideration is given to the Membrane Biofilm Reactors (MBfRs that can be operated both in oxidation and reduction mode.

  15. Controlled Carbon Source Addition to an Alternating Nitrification-Denitrification Wastewater Treatment Process Including Biological P Removal

    DEFF Research Database (Denmark)

    Isaacs, Steven Howard; Henze, Mogens

    1995-01-01

    The paper investigates the effect of adding an external carbon source on the rate of denitrification in an alternating activated sludge process including biological P removal. Two carbon sources were examined, acetate and hydrolysate derived from biologically hydrolyzed sludge. Preliminary batch ...

  16. Assessing Students' Abilities in Processes of Scientific Inquiry in Biology Using a Paper-and-Pencil Test

    Science.gov (United States)

    Nowak, Kathrin Helena; Nehring, Andreas; Tiemann, Rüdiger; Upmeier zu Belzen, Annette

    2013-01-01

    The aim of the study was to describe, categorise and analyse students' (aged 14-16) processes of scientific inquiry in biology and chemistry education. Therefore, a theoretical structure for scientific inquiry for both biology and chemistry, the VerE model, was developed. This model consists of nine epistemological acts, which combine…

  17. A Converter from the Systems Biology Markup Language to the Synthetic Biology Open Language.

    Science.gov (United States)

    Nguyen, Tramy; Roehner, Nicholas; Zundel, Zach; Myers, Chris J

    2016-06-17

    Standards are important to synthetic biology because they enable exchange and reproducibility of genetic designs. This paper describes a procedure for converting between two standards: the Systems Biology Markup Language (SBML) and the Synthetic Biology Open Language (SBOL). SBML is a standard for behavioral models of biological systems at the molecular level. SBOL describes structural and basic qualitative behavioral aspects of a biological design. Converting SBML to SBOL enables a consistent connection between behavioral and structural information for a biological design. The conversion process described in this paper leverages Systems Biology Ontology (SBO) annotations to enable inference of a designs qualitative function. PMID:26696234

  18. Application software for thecalculation of mineral processing flowsheet developed by Visual Basic%用VB开发选矿工艺流程计算应用软件

    Institute of Scientific and Technical Information of China (English)

    刘玖玖

    2001-01-01

    The flowsheet calculation problems in mineral processing design can be resolved by the application software for the calculation of mineral processing flow sheet developed by Visual Basic.The speed and quality of mineral processing design can be improved by the software.%利用VB开发的选矿工艺流程计算应用软件可解决选矿设计中工艺流程计算问题,提高选矿设计的速度和质量。

  19. Signal and Image Processing of Optical Coherence Tomography at 1310 nm Wavelength for Non Biological Samples

    Directory of Open Access Journals (Sweden)

    Yogesh Rao

    2015-04-01

    Full Text Available OCT is a recently developed optical interferometric technique for non-invasive diagnostic medical imaging in vivo; the most sensitive optical imaging modality.OCT finds its application in ophthalmology, blood flow estimation and cancer diagnosis along with many non biomedical applications. The main advantage of OCT is its high resolution which is in µm range and depth of penetration in mm range. Unlike other techniques like X rays and CT scan, OCT does not comprise any x ray source and therefore no radiations are involved. This research work discusses the basics of spectral domain OCT (SD-OCT, experimental setup, data acquisition and signal processing involved in OCT systems. Simulation of OCT involving modelling and signal processing, carried out on Lab VIEW platform has been discussed. Using the experimental setup, some of the non biomedical samples have been scanned. The signal processing and image processing of the scanned data was carried out in MATLAB and Lab VIEW, some of the results thus obtained have been discussed in the end.

  20. Biologically active collagen-based scaffolds: advances in processing and characterization.

    Science.gov (United States)

    Yannas, I V; Tzeranis, D S; Harley, B A; So, P T C

    2010-04-28

    A small number of type I collagen-glycosaminoglycan scaffolds (collagen-GAG scaffolds; CGSs) have unusual biological activity consisting primarily in inducing partial regeneration of organs in the adult mammal. Two of these are currently in use in a variety of clinical settings. CGSs appear to induce regeneration by blocking the adult healing response, following trauma, consisting of wound contraction and scar formation. Several structural determinants of biological activity have been identified, including ligands for binding of fibroblasts to the collagen surface, the mean pore size (which affects ligand density) and the degradation rate (which affects the duration of the wound contraction-blocking activity by the scaffold). Processing variables that affect these determinants include the kinetics of swelling of collagen fibres in acetic acid, freezing of the collagen-GAG suspension and cross-linking of the freeze-dried scaffold. Recent developments in the processing of CGSs include fabrication of scaffolds that are paucidisperse in pore size, scaffolds with gradients in physicochemical properties (and therefore biological activity) and scaffolds that incorporate a mineral component. Advances in the characterization of the pore structure of CGSs have been made using confocal and nonlinear optical microscopy (NLOM). The mechanical behaviour of CGSs, as well as the resistance to degradative enzymes, have been studied. Following seeding with cells (typically fibroblasts), contractile forces in the range 26-450 nN per cell are generated by the cells, leading to buckling of scaffold struts. Ongoing studies of cell-seeded CGSs with NLOM have shown an advantage over the use of confocal microscopy due to the ability of the former method to image the CGS surfaces without staining (which alters its surface ligands), reduced cell photodamage, reduced fluorophore photobleaching and the ability to image deeper inside the scaffold. PMID:20308118

  1. Combined advanced oxidation and biological treatment processes for the removal of pesticides from aqueous solutions

    International Nuclear Information System (INIS)

    Advanced oxidation processes were combined with biological treatment processes in this study to remove both pesticides and then the COD load from aqueous solutions. It was found that O3 and O3/UV oxidation systems were able to reach 90 and 100%, removal of the pesticide Deltamethrin, respectively, in a period of 210 min. The use of O3 combined with UV radiation enhances pesticides degradation and the residual pesticide reaches zero in the case of Deltamethrin. The combined O3/UV system can reduce COD up to 20% if the pH of the solution is above 4. Both pesticide degradation and COD removal in the combined O3/UV system follow the pseudo-first-order kinetics and the parameters of this model were evaluated. The application of the biological treatment to remove the bulk COD from different types of feed solution was investigated. More than 95% COD removal was achieved when treated wastewater by the O3/UV system was fed to the bioreactor. The parameters of the proposed Grau model were estimated

  2. A single-stage biological process for municipal sewage treatment in tourist areas.

    Science.gov (United States)

    Di Iaconi, C; De Sanctis, M; Lopez, A

    2014-11-01

    This pilot scale study aims to test the effectiveness of an innovative compact biological system (SBBGR - Sequencing Batch Biofilter Granular Reactor) for treating municipal wastewater in tourist areas characterised by intense seasonal water demand and wastewater discharge. The results obtained after a long term operation of 463 days have shown that the proposed system is able to assure average removal efficiencies higher than 90% for COD (chemical oxygen demand), total suspended solids and TKN (total Kjeldahl nitrogen) independently of the influent concentration values and organic loading, which ranged from 0.2 to 5.1 kgCOD/m(3)biofilter.d Furthermore, the plant showed a high degree of operation flexibility and stability in response to the organic load variations occurring in tourist areas. In fact, no significant deterioration in the plant's effluent quality was observed even during a sudden several-fold increase in organic loading. High nitrogen removal efficiencies (80%, on average) were also achieved thanks to the establishment of simultaneous nitrification-denitrification process favoured by the plant's high biomass concentration and operating conditions. Finally, the system was characterized by an excess sludge production much lower (60-80% lower) than that of conventional biological systems operating without a primary clarifier. An acceptable level of stabilization of excess sludge was also obtained so that a further stabilization process was no longer required. PMID:24908613

  3. eQTL Regulating Transcript Levels Associated with Diverse Biological Processes in Tomato.

    Science.gov (United States)

    Ranjan, Aashish; Budke, Jessica M; Rowland, Steven D; Chitwood, Daniel H; Kumar, Ravi; Carriedo, Leonela; Ichihashi, Yasunori; Zumstein, Kristina; Maloof, Julin N; Sinha, Neelima R

    2016-09-01

    Variation in gene expression, in addition to sequence polymorphisms, is known to influence developmental, physiological, and metabolic traits in plants. Genetic mapping populations have facilitated identification of expression quantitative trait loci (eQTL), the genetic determinants of variation in gene expression patterns. We used an introgression population developed from the wild desert-adapted Solanum pennellii and domesticated tomato (Solanum lycopersicum) to identify the genetic basis of transcript level variation. We established the effect of each introgression on the transcriptome and identified approximately 7,200 eQTL regulating the steady-state transcript levels of 5,300 genes. Barnes-Hut t-distributed stochastic neighbor embedding clustering identified 42 modules revealing novel associations between transcript level patterns and biological processes. The results showed a complex genetic architecture of global transcript abundance pattern in tomato. Several genetic hot spots regulating a large number of transcript level patterns relating to diverse biological processes such as plant defense and photosynthesis were identified. Important eQTL regulating transcript level patterns were related to leaf number and complexity as well as hypocotyl length. Genes associated with leaf development showed an inverse correlation with photosynthetic gene expression, but eQTL regulating genes associated with leaf development and photosynthesis were dispersed across the genome. This comprehensive eQTL analysis details the influence of these loci on plant phenotypes and will be a valuable community resource for investigations on the genetic effects of eQTL on phenotypic traits in tomato. PMID:27418589

  4. Connecting marine productivity to sea-spray via nanoscale biological processes: Phytoplankton Dance or Death Disco?

    Science.gov (United States)

    O'Dowd, Colin; Ceburnis, Darius; Ovadnevaite, Jurgita; Bialek, Jakub; Stengel, Dagmar B.; Zacharias, Merry; Nitschke, Udo; Connan, Solene; Rinaldi, Matteo; Fuzzi, Sandro; Decesari, Stefano; Cristina Facchini, Maria; Marullo, Salvatore; Santoleri, Rosalia; Dell'Anno, Antonio; Corinaldesi, Cinzia; Tangherlini, Michael; Danovaro, Roberto

    2015-10-01

    Bursting bubbles at the ocean-surface produce airborne salt-water spray-droplets, in turn, forming climate-cooling marine haze and cloud layers. The reflectance and ultimate cooling effect of these layers is determined by the spray’s water-uptake properties that are modified through entrainment of ocean-surface organic matter (OM) into the airborne droplets. We present new results illustrating a clear dependence of OM mass-fraction enrichment in sea spray (OMss) on both phytoplankton-biomass, determined from Chlorophyll-a (Chl-a) and Net Primary Productivity (NPP). The correlation coefficient for OMss as a function of Chl-a increased form 0.67 on a daily timescale to 0.85 on a monthly timescale. An even stronger correlation was found as a function of NPP, increasing to 0.93 on a monthly timescale. We suggest the observed dependence is through the demise of the bloom, driven by nanoscale biological processes (such as viral infections), releasing large quantities of transferable OM comprising cell debris, exudates and other colloidal materials. This OM, through aggregation processes, leads to enrichment in sea-spray, thus demonstrating an important coupling between biologically-driven plankton bloom termination, marine productivity and sea-spray modification with potentially significant climate impacts.

  5. CHANGES IN THE MICROBIAL COMPOSITION OF MUNICIPAL WASTEWATER TREATED IN BIOLOGICAL PROCESSES

    Directory of Open Access Journals (Sweden)

    Aleksandra Jolanta Bawiec

    2016-07-01

    Full Text Available Municipal wastewater is characterized by diverse microbial content, largely dependent on their sources as well as many other factors like condition and health of their producer, but also environmental factors. The number and share of individual bacterial population in wastewater is changing during the process of their treatment in wastewater treatment plants. The microbial content of treated wastewater is significantly affected by the type of technology used for wastewater treatment. The paper presents the results of the species composition of bacteria present in the wastewater at various stages of treatment for the two different technologies. Samples of wastewater from hydroponic wastewater treatment plant and from the plant which technology is based on biofilters were analysed. A key mechanism for wastewater treatment in both cases is biological treatment, using microbial activity that decomposes pollutants in the wastewater, which significantly contributes to changes in the species composition of bacteria comparing to microbiological composition of sewage flowing into the treatment plant. Analyses of microbial composition showed that in the objects consisting of preliminary tank and biofilter, composition of bacteria species is changing, but many species isolated from raw sewage is also found in treated wastewater. In the plant with hydroponic lagoon after wastewater treatment throughout the process system, bacteria present in raw sewage or in wastewater after biological treatment were not identified in the outlet.

  6. Network-based analysis of affected biological processes in type 2 diabetes models.

    Directory of Open Access Journals (Sweden)

    Manway Liu

    2007-06-01

    Full Text Available Type 2 diabetes mellitus is a complex disorder associated with multiple genetic, epigenetic, developmental, and environmental factors. Animal models of type 2 diabetes differ based on diet, drug treatment, and gene knockouts, and yet all display the clinical hallmarks of hyperglycemia and insulin resistance in peripheral tissue. The recent advances in gene-expression microarray technologies present an unprecedented opportunity to study type 2 diabetes mellitus at a genome-wide scale and across different models. To date, a key challenge has been to identify the biological processes or signaling pathways that play significant roles in the disorder. Here, using a network-based analysis methodology, we identified two sets of genes, associated with insulin signaling and a network of nuclear receptors, which are recurrent in a statistically significant number of diabetes and insulin resistance models and transcriptionally altered across diverse tissue types. We additionally identified a network of protein-protein interactions between members from the two gene sets that may facilitate signaling between them. Taken together, the results illustrate the benefits of integrating high-throughput microarray studies, together with protein-protein interaction networks, in elucidating the underlying biological processes associated with a complex disorder.

  7. Distorted wave calculations for electron loss process induced by bare ion impact on biological targets

    International Nuclear Information System (INIS)

    Distorted wave models are employed to investigate the electron loss process induced by bare ions on biological targets. The two main reactions which contribute to this process, namely, the single electron ionization as well as the single electron capture are here studied. In order to further assess the validity of the theoretical descriptions used, the influence of particular mechanisms are studied, like dynamic screening for the case of electron ionization and energy deposition on the target by the impacting projectile for the electron capture one. Results are compared with existing experimental data. - Highlights: ► Distorted wave models are used to investigate ion-molecule collisions. ► Differential and total cross-sections for capture and ionization are evaluated. ► The influence of dynamic screening is determined. ► Capture reaction dominates the mean energy deposited by the projectile on the target

  8. Signal processing for molecular and cellular biological physics: an emerging field

    Science.gov (United States)

    Little, Max A.; Jones, Nick S.

    2013-01-01

    Recent advances in our ability to watch the molecular and cellular processes of life in action—such as atomic force microscopy, optical tweezers and Forster fluorescence resonance energy transfer—raise challenges for digital signal processing (DSP) of the resulting experimental data. This article explores the unique properties of such biophysical time series that set them apart from other signals, such as the prevalence of abrupt jumps and steps, multi-modal distributions and autocorrelated noise. It exposes the problems with classical linear DSP algorithms applied to this kind of data, and describes new nonlinear and non-Gaussian algorithms that are able to extract information that is of direct relevance to biological physicists. It is argued that these new methods applied in this context typify the nascent field of biophysical DSP. Practical experimental examples are supplied. PMID:23277603

  9. Modelling GAC adsorption of biologically pre-treated process water from hydrothermal carbonization.

    Science.gov (United States)

    Fettig, J; Liebe, H

    2015-01-01

    Granular-activated carbon (GAC) adsorption of biologically pre-treated process waters from hydrothermal carbonization (HTC) of different materials was investigated. Overall, isotherms showed that most of the dissolved organic substances are strongly adsorbable while the non-adsorbable fractions are small. The equilibrium data were modelled by using five fictive components to represent the organic matter. Mean film transfer coefficients and mean intraparticle diffusivities were derived from short-column and batch kinetic test data, respectively. Breakthrough curves in GAC columns could be predicted satisfactorily by applying the film-homogeneous diffusion model and using the equilibrium and kinetic parameters determined from batch tests. Thus, the approach is suited to model GAC adsorption of HTC process water under technical-scale conditions. PMID:26114274

  10. Biological effects of radiation and chemical agents with special regard to repair processes

    International Nuclear Information System (INIS)

    It is reasonably certain that the introduction or increase of pollutants in the environment can augment mutagenic and carcinogenic effects. These effects are operationally definable, but the genetic organization and the underlying mechanisms of DNA repair, mutagenesis and carcinogenesis are so complex as to make the extrapolation of results from mutagenicity test data to carcinogenicity somewhat uncertain. The subject is reviewed. Recent discoveries in gene organization and expression include overlapping genes in bacteriophages, split genes, processing of RNA and splicing, translocation of genes in eukaryotes, inactivation of the X-chromosome in mammals, etc. Apart from the genetic regulation, plasmids, insertion sequences and mutators can additionally affect mutation frequency. Cancers due to gene mutations, viruses, chemicals and physical agents are known. However, little is known about the epigenetic mechanisms involved. The value of mutagenicity test data is beyond question, but in view of the extraordinary complexities encountered our extrapolations will be more sound if the data have the underpinning of basic information. (author)

  11. Biological Niches within Human Calcified Aortic Valves: Towards Understanding of the Pathological Biomineralization Process

    Directory of Open Access Journals (Sweden)

    Valentina Cottignoli

    2015-01-01

    Full Text Available Despite recent advances, mineralization site, its microarchitecture, and composition in calcific heart valve remain poorly understood. A multiscale investigation, using scanning electron microscopy (SEM, transmission electron microscopy (TEM, and energy dispersive X-ray spectrometry (EDS, from micrometre up to nanometre, was conducted on human severely calcified aortic and mitral valves, to provide new insights into calcification process. Our aim was to evaluate the spatial relationship existing between bioapatite crystals, their local growing microenvironment, and the presence of a hierarchical architecture. Here we detected the presence of bioapatite crystals in two different mineralization sites that suggest the action of two different growth processes: a pathological crystallization process that occurs in biological niches and is ascribed to a purely physicochemical process and a matrix-mediated mineralized process in which the extracellular matrix acts as the template for a site-directed nanocrystals nucleation. Different shapes of bioapatite crystallization were observed at micrometer scale in each microenvironment but at the nanoscale level crystals appear to be made up by the same subunits.

  12. Studies of Basic Electronic Properties of CdTe-Based Solar Cells and Their Evolution During Processing and Stress: Final Technical Report, 16 October 2001 - 31 August 2005

    Energy Technology Data Exchange (ETDEWEB)

    Kaydanov, V. I.; Ohno, T. R.

    2007-02-01

    This report describes basic issues behind CdTe/CdS cell performance and stability, such as the nature and electronic properties of impurities and defects that control the majority carrier concentration, mechanisms of dopant compensation, recombination processes, their nature and properties, migration and transformation of defects under various processing, stress, and operating conditions. We believe that a better basic understanding of the specific influence of grain boundaries, especially for fine-grain materials such as those making up CdTe-based cells, is now one of the most important issues we must address. We need to clarify the role of grain boundaries in forming the film electronic properties, as well as those of the p-n junction.

  13. Introducing Basic Molecular Biology to Turkish Rural and Urban Primary School Children via Hands-on PCR and Gel Electrophoresis Activities

    Science.gov (United States)

    Selli, Cigdem; Yildirim, Gokce; Kaymak, Aysegul; Karacicek, Bilge; Ogut, Deniz; Gungor, Turkan; Erem, Erdem; Ege, Mehmet; Bümen, Nilay; Tosun, Metiner

    2014-01-01

    This study includes the results of a 2-day education project titled "Molecular Biology Laboratory Summer School, MoBiLYO." The project was held at a University Research Center by scientists from Department of Pharmacology and graduate students. The project was composed of introductory lectures, model construction, DNA isolation,…

  14. Broadening Horizons and Teaching Basic Biology through Cell-Free Synthesis of Green Fluorescent Protein in a High School Laboratory Course

    Science.gov (United States)

    Albayrak, Cem; Jones, K. C.; Swartz, James R.

    2013-01-01

    Cell-free protein synthesis (CFPS) has emerged as a practical method for producing a broad variety of proteins. In addition, the direct accessibility to the reaction environment makes CFPS particularly suitable as a learning vehicle for fundamental biological concepts. Here, we describe its implementation as a teaching tool for a high school…

  15. Proceedings of the Scientific Meeting and Presentation on Basic Researchin Nuclear Science and Technology part II: Nuclear Chemistry, Process Technology, Radioactive Waste Management and Environment

    International Nuclear Information System (INIS)

    Scientific Meeting and Presentation on Basic Research in Nuclear Scienceand Technology is an annual activity held by Centre for Research and Development of Advanced Technology, National Nuclear Energy Agency, for monitoring research activities achieved by the Agency. The papers presented in the meeting were collected into proceedings. These are the second part of the proceedings that contain 71 articles in the fields of nuclear chemistry, process technology, radioactive waste management, and environment (PPIN).

  16. Development of a computational system for management of risks in radiosterilization processes of biological tissues

    International Nuclear Information System (INIS)

    Risk management can be understood to be a systematic management which aims to identify record and control the risks of a process. Applying risk management becomes a complex activity, due to the variety of professionals involved. In order to execute risk management the following are requirements of paramount importance: the experience, discernment and judgment of a multidisciplinary team, guided by means of quality tools, so as to provide standardization in the process of investigating the cause and effects of risks and dynamism in obtaining the objective desired, i.e. the reduction and control of the risk. This work aims to develop a computational system of risk management (software) which makes it feasible to diagnose the risks of the processes of radiosterilization of biological tissues. The methodology adopted was action-research, according to which the researcher performs an active role in the establishment of the problems found, in the follow-up and in the evaluation of the actions taken owing to the problems. The scenario of this action-research was the Laboratory of Biological Tissues (LTB) in the Radiation Technology Center IPEN/CNEN-SP - Sao Paulo/Brazil. The software developed was executed in PHP and Flash/MySQL language, the server (hosting), the software is available on the Internet (www.vcrisk.com.br), which the user can access from anywhere by means of the login/access password previously sent by email to the team responsible for the tissue to be analyzed. The software presents friendly navigability whereby the user is directed step-by-step in the process of investigating the risk up to the means of reducing it. The software 'makes' the user comply with the term and present the effectiveness of the actions taken to reduce the risk. Applying this system provided the organization (LTB/CTR/IPEN) with dynamic communication, effective between the members of the multidisciplinary team: a) in decision-making; b) in lessons learned; c) in knowing the new risk

  17. Open water processes of the San Francisco Estuary: From physical forcing to biological responses

    Directory of Open Access Journals (Sweden)

    Wim Kimmerer

    2004-02-01

    Full Text Available This paper reviews the current state of knowledge of the open waters of the San Francisco Estuary. This estuary is well known for the extent to which it has been altered through loss of wetlands, changes in hydrography, and the introduction of chemical and biological contaminants. It is also one of the most studied estuaries in the world, with much of the recent research effort aimed at supporting restoration efforts. In this review I emphasize the conceptual foundations for our current understanding of estuarine dynamics, particularly those aspects relevant to restoration. Several themes run throughout this paper. First is the critical role physical dynamics play in setting the stage for chemical and biological responses. Physical forcing by the tides and by variation in freshwater input combine to control the movement of the salinity field, and to establish stratification, mixing, and dilution patterns throughout the estuary. Many aspects of estuarine dynamics respond to interannual variation in freshwater flow; in particular, abundance of several estuarine-dependent species of fish and shrimp varies positively with flow, although the mechanisms behind these relationships are largely unknown. The second theme is the importance of time scales in determining the degree of interaction between dynamic processes. Physical effects tend to dominate when they operate at shorter time scales than biological processes; when the two time scales are similar, important interactions can arise between physical and biological variability. These interactions can be seen, for example, in the response of phytoplankton blooms, with characteristic time scales of days, to stratification events occurring during neap tides. The third theme is the key role of introduced species in all estuarine habitats; particularly noteworthy are introduced waterweeds and fishes in the tidal freshwater reaches of the estuary, and introduced clams there and in brackish water. The

  18. Basic Concurrency Theory

    DEFF Research Database (Denmark)

    Løvengreen, Hans Henrik

    2002-01-01

    In this set of notes, we present some of the basic theory underlying the discipline of programming with concurrent processes/threads. The notes are intended to supplement a standard textbook on concurrent programming.......In this set of notes, we present some of the basic theory underlying the discipline of programming with concurrent processes/threads. The notes are intended to supplement a standard textbook on concurrent programming....

  19. Telemetry System of Biological Parameters

    Directory of Open Access Journals (Sweden)

    Jan Spisak

    2005-01-01

    Full Text Available The mobile telemetry system of biological parameters serves for reading and wireless data transfer of measured values of selected biological parameters to an outlying computer. It concerns basically long time monitoring of vital function of car pilot.The goal of this projects is to propose mobile telemetry system for reading, wireless transfer and processing of biological parameters of car pilot during physical and psychical stress. It has to be made with respect to minimal consumption, weight and maximal device mobility. This system has to eliminate signal noise, which is created by biological artifacts and disturbances during the data transfer.

  20. Pilot plant study on ozonation and biological activated carbon process for drinking water treatment

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    A study on advanced drinking water treatment was conducted in a pilot scale plant taking water from conventional treatment process. Ozonation-biological activated carbon process (O3-BAC) and granular activated carbon process (GAC) were evaluated based on the following parameters: CODMn, UV254, total organic carbon (TOC), assimilable organic carbon (AOC) and biodegradable dissolved organic carbon (BDOC). In this test, the average removal rates of CODMn , UV254 and TOC in O3-BAC were18.2%, 9.0% and 10.2% higher on (AOC) than in GAC, respectively. Ozonation increased 19.3-57.6 μg Acetate-C/L in AOC-P17,45.6-130.6 μg Acetate-C/L in AOC-NOX and 0.1-0.5 mg/L in BDOC with ozone doses of 2-8 mg/L. The optimum ozone dose for maximum AOC formation was 3 mgO3/L. BAC filtration was effective process to improve biostability.

  1. A cell-free expression and purification process for rapid production of protein biologics.

    Science.gov (United States)

    Sullivan, Challise J; Pendleton, Erik D; Sasmor, Henri H; Hicks, William L; Farnum, John B; Muto, Machiko; Amendt, Eric M; Schoborg, Jennifer A; Martin, Rey W; Clark, Lauren G; Anderson, Mark J; Choudhury, Alaksh; Fior, Raffaella; Lo, Yu-Hwa; Griffey, Richard H; Chappell, Stephen A; Jewett, Michael C; Mauro, Vincent P; Dresios, John

    2016-02-01

    Cell-free protein synthesis has emerged as a powerful technology for rapid and efficient protein production. Cell-free methods are also amenable to automation and such systems have been extensively used for high-throughput protein production and screening; however, current fluidic systems are not adequate for manufacturing protein biopharmaceuticals. In this work, we report on the initial development of a fluidic process for rapid end-to-end production of recombinant protein biologics. This process incorporates a bioreactor module that can be used with eukaryotic or prokaryotic lysates that are programmed for combined transcription/translation of an engineered DNA template encoding for specific protein targets. Purification of the cell-free expressed product occurs through a series of protein separation modules that are configurable for process-specific isolation of different proteins. Using this approach, we demonstrate production of two bioactive human protein therapeutics, erythropoietin and granulocyte-macrophage colony-stimulating factor, in yeast and bacterial extracts, respectively, each within 24 hours. This process is flexible, scalable and amenable to automation for rapid production at the point-of-need of proteins with significant pharmaceutical, medical, or biotechnological value. PMID:26427345

  2. Basic electronics

    CERN Document Server

    Holbrook, Harold D

    1971-01-01

    Basic Electronics is an elementary text designed for basic instruction in electricity and electronics. It gives emphasis on electronic emission and the vacuum tube and shows transistor circuits in parallel with electron tube circuits. This book also demonstrates how the transistor merely replaces the tube, with proper change of circuit constants as required. Many problems are presented at the end of each chapter. This book is comprised of 17 chapters and opens with an overview of electron theory, followed by a discussion on resistance, inductance, and capacitance, along with their effects on t

  3. Streams of events and performance of queuing systems: The basic anatomy of arrival/departure processes, when the focus is set on autocorrelation

    DEFF Research Database (Denmark)

    Nielsen, Erland Hejn

    2004-01-01

    situation or at least a very sound approximation. However, on the other hand, most actual decision making is based upon information taken from the past - where else! In fact the only real alternative that comes into my mind is to let a pair of dices fully and completely rule behaviour, but I wonder...... some arrival processes for some simulation study a thorough preliminary analysis has to be undertaken in order to uncover the basic time series nature of the interacting processes. Flexible methods for generating streams of autocorrelated variates of any desired distributional type, such as the ARTA...

  4. Proceedings of the Scientific Meeting and Presentation on Basic Research in Nuclear of the Science and Technology part II : Nuclear Chemistry and Process Technology

    International Nuclear Information System (INIS)

    The Scientific Meeting and Presentation on Basic Research in Nuclear Science and Technology is a routine activity held by Centre for Accelerator Technology and Material Process, National Nuclear Energy Agency, for monitoring the research activity which achieved in National Nuclear Energy Agency. The Meeting was held in Yogyakarta on July 10, 2007. The proceedings contains papers presented on the meeting about Nuclear Chemistry and Process Technology and there are 47 papers which have separated index. The proceedings is the second part of the three parts which published in series. (PPIN)

  5. COD FRACTIONS IN THE PROCESS OF MECHANICAL-BIOLOGICAL TREATMENT SEWAGE

    Directory of Open Access Journals (Sweden)

    Joanna Smyk

    2015-11-01

    Full Text Available The aim of the research was to determine the COD fraction thereof in sewage and their changes in the effluent after further treatment processes. The study was conducted in a sewage treatment plant in Bialystok (RLM> 100000. In sewage the highest concentrations occurred in the suspension of the organic fractions slowly biodegradable XS (303.7 mg O2/l and dissolved organic compounds readily biodegradable SS (263 mg O2/l. The lower amounts were irreducible fractions dissolved in sewage and suspended SI (56 mg O2/l and XI (101.2 mg O2/l. Almost 80% of the total COD fractions were biodegradable (SS + XS. In the treated wastewater soluble fraction SI-biodegradable (56 mg O2/l occurred in the highest concentration. The flow of wastewater by components of sewage treatment plant resulted the complete removal of biologically degradable fraction of dissolved SS. More than 94.5% of the total COD in waste water purified fractions were biologically decomposable (SI + XI. Moreover, based on the analysis of studies the following soil removal was found: BOD5 – 99.4%, COD – 92.9%, total nitrogen – 93.4%, total phosphorus – 92%. After waste water treatment, ammonia nitrogen was completely removed while the nitrate concentration increased to 4.6 mg N/dm3.

  6. Basics of Bayesian Learning - Basically Bayes

    DEFF Research Database (Denmark)

    Larsen, Jan

    Tutorial presented at the IEEE Machine Learning for Signal Processing Workshop 2006, Maynooth, Ireland, September 8, 2006. The tutorial focuses on the basic elements of Bayesian learning and its relation to classical learning paradigms. This includes a critical discussion of the pros and cons. The...

  7. Brain Basics

    Medline Plus

    Full Text Available ... Life Brain Basics in Real Life—How Depression affects the Brain Meet Sarah Sarah is a middle-aged woman ... new memories. hypothalmic-pituitary-adrenal (HPA) axis —A brain-body ... stress. impulse —An electrical communication signal sent between neurons ...

  8. Basic Skills.

    Science.gov (United States)

    Luparelli, Augustus N.; And Others

    1981-01-01

    These four articles focus on developing basic reading, science, and job search skills: "Reading Program for Vocational Classes" by Augustus Luparelli; "Why Teach Employability Skills?" by Larry Siefferman; "Improving Vocabulary and Reading Skills" by Edythe Conway; and "Science in Everyday Life" by Virginia Eleazer and George Carney. (SK)

  9. Brain Basics

    Medline Plus

    Full Text Available ... Welcome. Brain Basics provides information on how the brain works, how mental illnesses are disorders of the brain, ... highly developed area at the front of the brain that, in humans, plays a role in executive functions such as ...

  10. Ethanol Basics

    Energy Technology Data Exchange (ETDEWEB)

    None

    2015-01-30

    Ethanol is a widely-used, domestically-produced renewable fuel made from corn and other plant materials. More than 96% of gasoline sold in the United States contains ethanol. Learn more about this alternative fuel in the Ethanol Basics Fact Sheet, produced by the U.S. Department of Energy's Clean Cities program.

  11. Basic Backwardness.

    Science.gov (United States)

    Weingartner, Charles

    This paper argues that the "back to basics" movement is regressive and that regression is the characteristic mode of fear-ridden personalities. It is argued that many people in American society today have lost their ability to laugh and do not have the sense of humor which is crucial to a healthy mental state. Such topics as necrophilia, mental…

  12. Assessment of the removal of estrogenicity in biological nutrient removal wastewater treatment processes

    International Nuclear Information System (INIS)

    The removal of estrogenicity in a University of Cape Town-biological nutrient removal (UCT-BNR) wastewater treatment process was investigated using pilot and bench scale systems, batch experiments and mathematical modeling. In the pilot BNR process, 96 ± 5% of the estrogenicity exerted by the influent wastewater was removed by the treatment process. The degradation efficiencies in the anaerobic, anoxic and aerobic zones of the pilot BNR bioreactor were 11 ± 9%, 18 ± 2% and 93 ± 10%, respectively. In order to further understand the performance of the BNR process in the removal of estrogenicity from wastewater, a bench scale BNR process was operated with synthetic wastewater dosed with E1 and E2. The removal of estrogenicity in the bench scale system (95 ± 5%) was comparable to the pilot BNR process and the degradation efficiencies were estimated to be 8 ± 0.8%, 38 ± 4% and 85 ± 22% in the anaerobic, anoxic and aerobic zones, respectively. A biotransformation model developed to predict the fate of E1 and E2 in batch tests using the sludge from the BNR process was calibrated using the data from the experiments. The biotransformation rate constants for the transformation of E2 to E1 were estimated as 71 ± 1.5, 31 ± 3.3 and 1 ± 0.9 L g COD−1 d−1 for the aerobic, anoxic and anaerobic batch tests, respectively, while the corresponding biotransformation rate constants for the transformation of E1 were estimated to be 7.3 ± 1.0, 3 ± 2.0, and 0.85 ± 0.6 L·g COD−1 d−1. A steady state mass balance model formulated to describe the interactions between E2 and E1 in BNR activated sludge reasonably described the fate of E1 and E2 in the BNR process. - Highlights: • Comparable estrogenicity removal was observed from two BNR processes. • Pseudo first order model described the transformation of E2 and E1 in BNR process. • Biotransformation of E1 in BNR activated sludge controls the degradation of E2

  13. Assessment of the removal of estrogenicity in biological nutrient removal wastewater treatment processes

    Energy Technology Data Exchange (ETDEWEB)

    Ogunlaja, O.O., E-mail: oogunlaj@uwaterloo.ca; Parker, W.J., E-mail: wjparker@uwaterloo.ca

    2015-05-01

    The removal of estrogenicity in a University of Cape Town-biological nutrient removal (UCT-BNR) wastewater treatment process was investigated using pilot and bench scale systems, batch experiments and mathematical modeling. In the pilot BNR process, 96 ± 5% of the estrogenicity exerted by the influent wastewater was removed by the treatment process. The degradation efficiencies in the anaerobic, anoxic and aerobic zones of the pilot BNR bioreactor were 11 ± 9%, 18 ± 2% and 93 ± 10%, respectively. In order to further understand the performance of the BNR process in the removal of estrogenicity from wastewater, a bench scale BNR process was operated with synthetic wastewater dosed with E1 and E2. The removal of estrogenicity in the bench scale system (95 ± 5%) was comparable to the pilot BNR process and the degradation efficiencies were estimated to be 8 ± 0.8%, 38 ± 4% and 85 ± 22% in the anaerobic, anoxic and aerobic zones, respectively. A biotransformation model developed to predict the fate of E1 and E2 in batch tests using the sludge from the BNR process was calibrated using the data from the experiments. The biotransformation rate constants for the transformation of E2 to E1 were estimated as 71 ± 1.5, 31 ± 3.3 and 1 ± 0.9 L g COD{sup −1} d{sup −1} for the aerobic, anoxic and anaerobic batch tests, respectively, while the corresponding biotransformation rate constants for the transformation of E1 were estimated to be 7.3 ± 1.0, 3 ± 2.0, and 0.85 ± 0.6 L·g COD{sup −1} d{sup −1}. A steady state mass balance model formulated to describe the interactions between E2 and E1 in BNR activated sludge reasonably described the fate of E1 and E2 in the BNR process. - Highlights: • Comparable estrogenicity removal was observed from two BNR processes. • Pseudo first order model described the transformation of E2 and E1 in BNR process. • Biotransformation of E1 in BNR activated sludge controls the degradation of E2.

  14. Apparatus and process to eliminate diffusional limitations in a membrane biological reactor by pressure cycling

    Science.gov (United States)

    Efthymiou, George S.; Shuler, Michael L.

    1989-08-29

    An improved multilayer continuous biological membrane reactor and a process to eliminate diffusional limitations in membrane reactors in achieved by causing a convective flux of nutrient to move into and out of an immobilized biocatalyst cell layer. In a pressure cycled mode, by increasing and decreasing the pressure in the respective layers, the differential pressure between the gaseous layer and the nutrient layer is alternately changed from positive to negative. The intermittent change in pressure differential accelerates the transfer of nutrient from the nutrient layers to the biocatalyst cell layer, the transfer of product from the cell layer to the nutrient layer and the transfer of byproduct gas from the cell layer to the gaseous layer. Such intermittent cycling substantially eliminates mass transfer gradients in diffusion inhibited systems and greatly increases product yield and throughput in both inhibited and noninhibited systems.

  15. The biological role of a-ketoglutaric acid in physiological processes and its therapeutic potential.

    Science.gov (United States)

    Grzesiak, Paulina; Słupecka-Ziemilska, Monika; Woliński, Jarosław

    2016-01-01

    In this article we present the results of recent studies on the mechanism of action and biological role of α-ketoglutaric acid (AKG) in animals including developmental period of life. AKG is an intermediate in the Krebs cycle, which generates energy for life processes. Administration of AKG has been shown to be beneficial for proper development and function of the skeletal system during growth of young organisms, as well as in adulthood. In the form of a dietary supplement it also contributes to inhibition of osteoporosis in women. Moreover, it promotes the growth of muscle mass and accelerates wound healing. AKG has a significant impact on the morphology of the gastrointestinal tract in healthy animals and animals with damaged gastrointestinal tract mucosa. It is also a promising substance for the treatment of patients with short bowel syndrome, as it stimulates beneficial changes in intestinal morphology. Recent research has also revealed that AKG has neuroprotective effects. PMID:27416627

  16. Fate of dissolved organic nitrogen during biological nutrient removal wastewater treatment processes.

    Science.gov (United States)

    Liu, Bing; Lin, Huirong; Yu, Guozhong; Zhang, Shenghua; Zhao, Chengmei

    2013-04-01

    Due to its potential to form toxic nitrogenous disinfection byproducts (N-DBPs), dissolved organic nitrogen (DON) is considered as one of the most important parameters in wastewater treatment plants (WWTP). This study describes a comprehensive investigation of variations in DON levels in orbal oxidation ditches. The results showed that DON increased gradually from 0.71 to 1.14 mg I(-1) along anaerobic zone, anoxic zone, aerobic zone 1 and aerobic 2. Molecular weight fractionation of DON in one anaerobic zone and one aerobic zone (aerobic zone 2) was performed. We found that the proportion of small molecular weight ( 20 kDa) showed opposite trend. This variation may have been caused due to the release of different types of soluble microbial products (SMPs) during biological processes. These SMPs contained both tryptophan protein-like and aromatic protein-like substances, which were confirmed by three-dimensional excitation-emission matrix (EEM) analysis. PMID:24620601

  17. Molecular imaging with radionuclides, a powerful technique for studying biological processes in vivo

    Science.gov (United States)

    Cisbani, E.; Cusanno, F.; Garibaldi, F.; Magliozzi, M. L.; Majewski, S.; Torrioli, S.; Tsui, B. M. W.

    2007-02-01

    Our team is carrying on a systematic study devoted to the design of a SPECT detector with submillimeter resolution and adequate sensitivity (1 cps/kBq). Such system will be used for functional imaging of biological processes at molecular level in small animal. The system requirements have been defined by two relevant applications: study of atherosclerotic plaques characterization and stem cells diffusion and homing. In order to minimize costs and implementation time, the gamma detector will be based—as much as possible—on conventional components: scintillator crystal and position sensitive PhotoMultipliers read by individual channel electronics. A coded aperture collimator should be adapted to maximize the efficiency. The optimal selection of the detector components is investigated by systematic use of Monte-Carlo simulations (and laboratory validation tests); and finally preliminary results are presented and discussed here.

  18. Image Processing And Pattern Recognition With Applications To Marine Biological Images

    Science.gov (United States)

    Katsinis, C.; Poularikas, A. D.; Jeffries, H. P.

    1984-12-01

    Erosion and dilation of images were compared with other edge detection techniques on a variety of marine organisms. Under certain conditions the erosion and dilation technique gave better results. The critical problem resolved by our approach was low contrast imaging of randomly oriented objects that displayed random variations due to appendages that frequently appearred with marine biological samples. A multicomputer system was developed to perform image processing and morphological feature extraction on large number of samples. Emphasis was given to system reliability and expandability, allowing for performance at a reduced rate when one or more computers malfunctioned. The system currently operates with seven computers but can be expanded to contain up to seventeen. Classification accuracy on zooplankton samples from New England coastal waters was approximately 92%.

  19. Importance of Translational Entropy of Water in Biological Self-Assembly Processes like Protein Folding

    Directory of Open Access Journals (Sweden)

    Masahiro Kinoshita

    2009-03-01

    Full Text Available We briefly review our studies on the folding/unfolding mechanisms of proteins. In biological self-assembly processes such as protein folding, the number of accessible translational configurations of water in the system increases greatly, leading to a large gain in the water entropy. The usual view looking at only the water in the close vicinity of the protein surface is capable of elucidating neither the large entropic gain upon apoplastocyanin folding, which has recently been found in a novel experimental study, nor the pressure and cold denaturation. With the emphasis on the translational entropy of water, we are presently constructing a reliable method for predicting the native structure of a protein from its amino-acid sequence.

  20. Insights into biological information processing: structural and dynamical analysis of a human protein signalling network

    International Nuclear Information System (INIS)

    We present an investigation on the structural and dynamical properties of a 'human protein signalling network' (HPSN). This biological network is composed of nodes that correspond to proteins and directed edges that represent signal flows. In order to gain insight into the organization of cell information processing this network is analysed taking into account explicitly the edge directions. We explore the topological properties of the HPSN at the global and the local scale, further applying the generating function formalism to provide a suitable comparative model. The relationship between the node degrees and the distribution of signals through the network is characterized using degree correlation profiles. Finally, we analyse the dynamical properties of small sub-graphs showing high correlation between their occurrence and dynamic stability

  1. OPTIMIZATION OF WHEAT BRAN MEDIUM PROCESSING CONDITIONS, ASSESSMENT OF BIOLOGICAL VALUE FOR SACCHAROMYCES

    Directory of Open Access Journals (Sweden)

    Victor Panfilov

    2015-09-01

    Full Text Available Biotechnological methods have perhaps the greatest potential in deep processing of renewable raw materials. Bioconversion of lignocelluloses materials substantially increases its bioavailability and effectiveness of consumption by microorganisms. The enzymatic and chemical hydrolysis of wheat bran under mild conditions are compared in this study.The purpose of this study was to define microbiological and biochemical criteria for the bioconversion. Enzymatic hydrolysis of extruded bran was held with three enzyme preparations usually used in the conversion of vegetable raw materials: “Viscoferm,” “Cellic HTec2,” and “Celloviridin G20x.” The central composite design was used for parameter optimization. Saccharomyces cerevisiae yeast was used for assessment of biological value of the slurry obtained. The content of crude protein of the product obtained was 1.9 times higher than the initial.

  2. Composting of biological waste. Processes and utilisation. Summary report; Bioabfallkompostierung. Verfahren und Verwertung. Kurzfassung

    Energy Technology Data Exchange (ETDEWEB)

    Gronauer, A.; Claassen, N.; Ebertseder, T.; Fischer, P.; Gutser, R.; Helm, M.; Popp, L.; Schoen, H.

    1997-12-31

    The project investigated environmentally compatible concepts for processing and utilisation of biological waste by means of composting and spreading on agriculataural and gardening plots. The project comprised three parts: Composting techniques, applications of compost in agriculture and gardening, and applications in landscaping. This volume comprises the summaries of the three part-projects. (orig./SR) [Deutsch] Die umweltschonende Aufbereitung und Verwertung von Bioabfall durch Kompostierung und Rueckfuehrung auf landwirtschaftliche und gaertnerische Flaechen wurde untersucht. Dieses Projekt war dreigeteilt in die Bereiche der Kompostierung selbst, der Anwendung des Komposts in der Landwirtschaft und seiner Anwendung im Gartenbau sowie im Garten- und Landschaftsbau (GaLa-Bau). Die vorliegende Schrift enthaelt die Zusammenfassung der genannten drei Teilberichte. (orig./SR)

  3. Biological treatment processes for PCB contaminated soil at a site in Newfoundland

    International Nuclear Information System (INIS)

    SAIC Canada is conducting a study under the direction of a joint research and development contract between Public Works and Government Services Canada and Environment Canada to examine the biological options for treating PCB contaminated soil found at a containment cell at a former U.S. Military Base near Stephenville, Newfoundland. In particular, the study examines the feasibility of using indigenous microbes for the degradation of PCBs. The first phase of the study involved the testing of the microbes in a bioreactor. The second phase, currently underway, involves a complete evaluation of possible microbes for PCB degradation. It also involves further study into the biological process options for the site. Suitable indigenous and non-indigenous microbes for PCB dechlorination and biphenyl degradation are being identified and evaluated. In addition, the effectiveness and economics of microbial treatment in a conventional bioreactor is being evaluated. The conventional bioreactor used in this study is the two-phase partitioning bioreactor (TPPB) using a biopile process. Results thus far will be used to help Public Works and Government Services Canada to choose the most appropriate remedial technology. Preliminary results suggest that the use of soil classification could reduce the volume of soil requiring treatment. The soil in the containment cell contains microorganisms that could grow in isolation on biphenyl, naphthalene and potentially Aroclor 1254. Isolated native microbes were inoculated in the TPPB for growth. The TPPB was also run successfully under anaerobic conditions. Future work will involve lab-scale evaluation of microbes for PCB dechlorination and biphenyl degradation using both indigenous and non-indigenous microbes. The next phase of study may also involve field-scale demonstration of treatment methods. 2 refs., 3 tabs., 5 figs

  4. Biological processes for concentrating trace elements from uranium mine waters. Technical completion report

    International Nuclear Information System (INIS)

    Waste water from uranium mines in the Ambrosia Lake district near Grants, New Mexico, USA, contains uranium, selenium, radium and molybdenum. The Kerr-McGee Corporation has a novel treatment process for waters from two mines to reduce the concentrations of the trace contaminants. Particulates are settled by ponding, and the waters are passed through an ion exchange resin to remove uranium; barium chloride is added to precipitate sulfate and radium from the mine waters. The mine waters are subsequently passed through three consecutive algae ponds prior to discharge. Water, sediment and biological samples were collected over a 4-year period and analyzed to assess the role of biological agents in removal of inorganic trace contaminants from the mine waters. Some of the conclusions derived from this study are: (1) The concentrations of soluble uranium, selenium and molybdenum were not diminished in the mine waters by passage through the series of impoundments which constituted the mine water treatment facility. Uranium concentrations were reduced but this was due to passage of the water through an ion exchange column. (2) The particulate concentrations of the mine water were reduced at least ten-fold by passage of the waters through the impoundments. (3) The sediments were anoxic and enriched in uranium, molybdenum and selenium. The deposition of particulates and the formation of insoluble compounds were proposed as mechanisms for sediment enrichment. (4) The predominant algae of the treatment ponds were the filamentous Spirogyra and Oscillatoria, and the benthic alga, Chara. (5) Adsorptive processes resulted in the accumulation of metals in the algae cells. (6) Stimulation of sulfate reduction by the bacteria resulted in retention of molybdenum, selenium, and uranium in sediments. 1 figure, 16 tables

  5. Ozone-biological activated carbon as a pretreatment process for reverse osmosis brine treatment and recovery.

    Science.gov (United States)

    Lee, Lai Yoke; Ng, How Yong; Ong, Say Leong; Hu, Jiang Yong; Tao, Guihe; Kekre, Kiran; Viswanath, Balakrishnan; Lay, Winson; Seah, Harry

    2009-09-01

    Ozonation was used in this study to improve biodegradability of RO brine from water reclamation facilities. An ozone dosage ranging from 3 to 10 mg O(3)/L and contact times of 10 and 20 min in batch studies were found to increase the biodegradability (BOD(5)/TOC ratio) of the RO brine by 1.8-3.5 times. At the same time, total organic carbon (TOC) removal was in the range of 5.3-24.5%. The lab-scale ozone-biological activated carbon (BAC) at an ozone dosage of 6.0mg O(3)/L with 20-min contact time was able to achieve 3 times higher TOC removal compared to using BAC alone. Further processing with Capacitive Deionization (CDI) process was able to generate a product water with better water quality than the RO feed water, i.e., with more than 80% ions removal and a lower TOC concentration. The ozone-BAC pretreatment has the potential of reducing fouling in the CDI process. PMID:19580984

  6. Coking wastewater treatment for industrial reuse purpose: combining biological processes with ultrafiltration, nanofiltration and reverse osmosis.

    Science.gov (United States)

    Jin, Xuewen; Li, Enchao; Lu, Shuguang; Qiu, Zhaofu; Sui, Qian

    2013-08-01

    A full-scale plant using anaerobic, anoxic and oxic processes (A1/A2/O), along with a pilot-scale membrane bioreactor (MBR), nanofiltration (NF) and reverse osmosis (RO) integrated system developed by Shanghai Baosteel Chemical Co. Ltd., was investigated to treat coking wastewater for industrial reuse over a period of one year. The removals reached 82.5% (COD), 89.6% (BOD), 99.8% (ammonium nitrogen), 99.9% (phenol), 44.6% (total cyanide (T-CN)), 99.7% (thiocyanide (SCN-)) and 8.9% (fluoride), during the A1/A2/O biological treatment stage, and all parameters were further reduced by over 96.0%, except for fluoride (86.4%), in the final discharge effluent from the currently operating plant. The pilot-scale MBR process reduced the turbidity to less than 0.65 NTU, and most of the toxic organic compounds were degraded or intercepted by the A1/A2/O followed MBR processes. In addition, parameters including COD, T-CN, total nitrogen, fluoride, chloride ion, hardness and conductivity were significantly reduced by the NF-RO system to a level suitable for industrial reuse, with a total water production ratio of 70.7%. However, the concentrates from the NF and RO units were highly polluted and should be disposed of properly or further treated before being discharged. PMID:24520694

  7. Micro-processing of polymers and biological materials using high repetition rate femtosecond laser pulses

    Science.gov (United States)

    Ding, Li

    has been observed in or around the laser-induced refractive index modification regions. These results support the notion that femtosecond laser micro-processing method may be an excellent means of altering the refraction or higher order aberration content of corneal tissue without cell death and short-term tissue damage, and has been named as Intra-tissue Refractive Index Shaping (IRIS). The femtosecond laser micro-processing workstation has also been employed for laser transfection of single defined cells. Some preliminary results suggest that this method can be used to trace individual cells and record their biological and morphological evolution, which is quite promising in many biomedical applications especially in immunology science. In conclusion, high repetition rate femtosecond laser micro-processing has been employed to fabricate microstructures in ophthalmological hydrogels and ocular tissues. Its unique three-dimensional capability over transparent materials and biological media makes it a powerful tool and will greatly impact the future of laser material-processing.

  8. Degradation of benzalkonium chloride coupling photochemical advanced oxidation technologies with biological processes

    International Nuclear Information System (INIS)

    The combination of Advanced Oxidation Technologies (AOTs) and biological processes can be visualized as a very successful technological option for treatment of effluents, because it combines high oxidizing technologies with a conventional, low-cost and well-established treatment technology.Photochemical AOTs, like UV-C with or without H2O2, photo-Fenton (PF, UV/H2O2/Fe(II-III)) and UV/TiO2 heterogeneous photo catalysis involve the generation and use of powerful oxidizing species, mainly the hydroxyl radical.In almost all AOTs, it is possible to use sunlight. Benzalkonium chloride (dodecyldimetylbencylammonium chloride, BKC) is a widely used surfactant, which has many industrial applications.Due to its antibacterial effect, it cannot be eliminated from effluents by a biological treatment, and the complexity of its chemical structure makes necessary the use of drastic oxidizing treatments to achieve complete mineralization and to avoid the formation of byproducts even more toxic than the initial compound.In this study, different alternatives for BKC treatment using photochemical AOTs followed by bio catalytic techniques are presented.Three AOTs were tested: a) UV-C (254 nm, germicide lamp) with and without H2O2, b) PF (366 nm), c) UV/TiO2 (254 and 366 nm). PF at a 15:1:1 H2O2total/BKC0/Fe0 molar ratio at 55 degree C was the most efficient treatment in order to decrease the tensioactivity and the total organic carbon of the solution . The biocatalysis was studied in a reactor fitted with a biofilm of microorganisms coming from a sludge-water treatment plant. To evaluate the maximal BKC concentration that could be allowed to ingress to the biological reactor after the AOT treatment, the toxicity of solutions of different BKC concentrations was analyzed. The study of the relevant parameters of both processes and their combination allowed to establish the preliminary conditions for optimizing the pollutant degradation

  9. A Practical Approach to Quantitative Processing and Analysis of Small Biological Structures by Fluorescent Imaging

    Science.gov (United States)

    Noller, Crystal M.; Boulina, Maria; McNamara, George; Szeto, Angela; McCabe, Philip M.

    2016-01-01

    Standards in quantitative fluorescent imaging are vaguely recognized and receive insufficient discussion. A common best practice is to acquire images at Nyquist rate, where highest signal frequency is assumed to be the highest obtainable resolution of the imaging system. However, this particular standard is set to insure that all obtainable information is being collected. The objective of the current study was to demonstrate that for quantification purposes, these correctly set acquisition rates can be redundant; instead, linear size of the objects of interest can be used to calculate sufficient information density in the image. We describe optimized image acquisition parameters and unbiased methods for processing and quantification of medium-size cellular structures. Sections of rabbit aortas were immunohistochemically stained to identify and quantify sympathetic varicosities, >2 μm in diameter. Images were processed to reduce background noise and segment objects using free, open-access software. Calculations of the optimal sampling rate for the experiment were based on the size of the objects of interest. The effect of differing sampling rates and processing techniques on object quantification was demonstrated. Oversampling led to a substantial increase in file size, whereas undersampling hindered reliable quantification. Quantification of raw and incorrectly processed images generated false structures, misrepresenting the underlying data. The current study emphasizes the importance of defining image-acquisition parameters based on the structure(s) of interest. The proposed postacquisition processing steps effectively removed background and noise, allowed for reliable quantification, and eliminated user bias. This customizable, reliable method for background subtraction and structure quantification provides a reproducible tool for researchers across biologic disciplines.

  10. Basic concepts on threat, vulnerability and risk associated to a process of massive use of gaseous fuels

    International Nuclear Information System (INIS)

    The massive use of gaseous fuels, natural gas and liquefied gas of the oil or G.L.P., demands the implementation and complex technologies utilization in each one of the technical activities operative that transportation, distribution and consumption of these fuels requires, in order to accomplish each one of they in the form most efficient and possible insurance. Natural phenomena (earthquakes, landslides) and technical phenomena and caused by the man (terrorism, not appropriate designs of transportation and distribution net, wrong manipulation of the gas equipment) represent a latent danger for the distributors as well as for the users of the gas, generating a threat, of large proportions, for the normal development of the program of massive use of the gas, in any geographical environment where this is implemented. In this article are described the disaster concepts, threat, vulnerability and risk and the form as are related to the project of massive use of the gas, basically to transportation areas, distribution and final use

  11. Visual processing in reading disorders and attention-deficit/hyperactivity disorder and its contribution to basic reading ability

    OpenAIRE

    Kibby, Michelle Y.; Dyer, Sarah M.; Vadnais, Sarah A.; Jagger, Audreyana C.; Casher, Gabriel A.; Stacy, Maria

    2015-01-01

    Whether visual processing deficits are common in reading disorders (RD), and related to reading ability in general, has been debated for decades. The type of visual processing affected also is debated, although visual discrimination and short-term memory (STM) may be more commonly related to reading ability. Reading disorders are frequently comorbid with ADHD, and children with ADHD often have subclinical reading problems. Hence, children with ADHD were used as a comparison group in this stud...

  12. Basic study on the mineralization of organic solvents by the silver mediated electrochemical oxidation process with the ultrasound agitation

    International Nuclear Information System (INIS)

    The silver mediated electrochemical oxidation (Ag/MEO) process with the ultrasound agitation has been developed for the purpose of the mineralization of organic wastes containing transuranium nuclides (TRU wastes) at the nuclear fuel reprocessing process. In the Ag/MEO process, organic solvents are decomposed by divalent silver cations under the relatively low temperature and the ambient pressure condition. The ultrasound agitation is effective in mixing the electrolytic solutions and the organic solvents, and is expected to promote the oxidation of the organic solvents. Therefore, the Ag/MEO process with the ultrasound agitation could be a candidate for the treatment of organic solvents. Destruction tests of tributylphosphate and dodecane by the Ag/MEO process were conducted to optimize some treatment conditions about electrolytic currents, solution temperatures, nitric acid concentrations and ultrasound intensities. Under optimized conditions, the destruction tests of kerosene and N,N,N',N'-tetraoctyl-3-oxapentane-1,5-diamide (TODGA) were carried out. It was confirmed that the Ag/MEO process is effective for the mineralization of these organic solvents. (author)

  13. Biologically produced sulfur particles and polysulfide ions

    OpenAIRE

    Kleinjan, W.E.

    2005-01-01

    This thesis deals with the effects of particles of biologically produced sulfur (or 'biosulfur') on a biotechnological process for the removal of hydrogen sulfide from gas streams. Particular emphasis is given to the role of polysulfide ions in such a process. These polysulfide ions are formed from reaction of sulfide with biologically produced sulfur. The basic concepts of this H 2 S removal process were developed at the department of Environmental Technology of Wageningen University and the...

  14. Expanding biological data standards development processes for US IOOS: visual line transect observing community for mammal, bird, and turtle data

    Science.gov (United States)

    Fornwall, M.; Gisiner, R.; Simmons, S. E.; Moustahfid, Hassan; Canonico, G.; Halpin, P.; Goldstein, P.; Fitch, R.; Weise, M.; Cyr, N.; Palka, D.; Price, J.; Collins, D.

    2012-01-01

    The US Integrated Ocean Observing System (IOOS) has recently adopted standards for biological core variables in collaboration with the US Geological Survey/Ocean Biogeographic Information System (USGS/OBIS-USA) and other federal and non-federal partners. In this Community White Paper (CWP) we provide a process to bring into IOOS a rich new source of biological observing data, visual line transect surveys, and to establish quality data standards for visual line transect observations, an important source of at-sea bird, turtle and marine mammal observation data. The processes developed through this exercise will be useful for other similar biogeographic observing efforts, such as passive acoustic point and line transect observations, tagged animal data, and mark-recapture (photo-identification) methods. Furthermore, we suggest that the processes developed through this exercise will serve as a catalyst for broadening involvement by the larger marine biological data community within the goals and processes of IOOS.

  15. Basic Study of Establishment of Quality Assurance Processes to Develop an Integrated Quality Assurance System for Nuclear Power Plant Construction

    International Nuclear Information System (INIS)

    An integrated quality assurance system has necessitated carrying out quality assurance programs in a systematic manner because the opportunities to expand business in overseas markets have increased since the export of a nuclear power plant to UAE in 2009. In this study, we use PDCA method to systematically analyze the quality assurance procedures that were used in previous projects for constructing nuclear power plants. We reached a classification system of quality assurance processes at each phase of nuclear power plant construction by integrating similar work related to quality such as planning, design, equipment manufacturing, construction and start-up. We also established a hierarchy of quality assurance processes to develop an integrated quality assurance system as a technology goal to be developed later. To obtain most updated quality assurance activities, a quality assurance process is structured by integrating similar works analyzed from quality assurance procedures through PDCA cycle method. At the implementation phase of Hierarchy of quality processes and sequence of processes for constructing nuclear power plant are established in this study. Integrated quality assurance system is to be developed by connecting organizations as well as stakeholders such as owners, Architect engineering, suppliers, contractors, and sub-contractors to carry out assigned work efficiently

  16. Basic radiobiology

    International Nuclear Information System (INIS)

    Radiobiology, a branch of science concerned with the action of ionizing radiation on biological tissues and living organisms, is a combination of two disciplines: radiation physics and biology. For use in radiobiology and radiation protection the physical quantity that is useful for defining the quality of an ionizing radiation beam is the linear energy transfer (LET). In contrast to the stopping power, which focuses attention on the energy loss by an energetic charged particle moving through a medium, the LET focuses attention on the linear rate of energy absorption by the absorbing medium as the charged particle traverses the medium. When cells are exposed to ionizing radiation the standard physical effects between radiation and the atoms or molecules of the cells occur first and the possible biological damage to cell functions follows later. The biological effects of radiation result mainly from damage to the DNA, which is the most critical target within the cell; however, there are also other sites in the cell that, when damaged, may lead to cell death

  17. A compact and versatile microfluidic probe for local processing of tissue sections and biological specimens

    Science.gov (United States)

    Cors, J. F.; Lovchik, R. D.; Delamarche, E.; Kaigala, G. V.

    2014-03-01

    The microfluidic probe (MFP) is a non-contact, scanning microfluidic technology for local (bio)chemical processing of surfaces based on hydrodynamically confining nanoliter volumes of liquids over tens of micrometers. We present here a compact MFP (cMFP) that can be used on a standard inverted microscope and assist in the local processing of tissue sections and biological specimens. The cMFP has a footprint of 175 × 100 × 140 mm3 and can scan an area of 45 × 45 mm2 on a surface with an accuracy of ±15 μm. The cMFP is compatible with standard surfaces used in life science laboratories such as microscope slides and Petri dishes. For ease of use, we developed self-aligned mounted MFP heads with standardized "chip-to-world" and "chip-to-platform" interfaces. Switching the processing liquid in the flow confinement is performed within 90 s using a selector valve with a dead-volume of approximately 5 μl. We further implemented height-compensation that allows a cMFP head to follow non-planar surfaces common in tissue and cellular ensembles. This was shown by patterning different macroscopic copper-coated topographies with height differences up to 750 μm. To illustrate the applicability to tissue processing, 5 μm thick M000921 BRAF V600E+ melanoma cell blocks were stained with hematoxylin to create contours, lines, spots, gradients of the chemicals, and multiple spots over larger areas. The local staining was performed in an interactive manner using a joystick and a scripting module. The compactness, user-friendliness, and functionality of the cMFP will enable it to be adapted as a standard tool in research, development and diagnostic laboratories, particularly for the interaction with tissues and cells.

  18. Quantum electronics basic theory

    CERN Document Server

    Fain, V M; Sanders, J H

    1969-01-01

    Quantum Electronics, Volume 1: Basic Theory is a condensed and generalized description of the many research and rapid progress done on the subject. It is translated from the Russian language. The volume describes the basic theory of quantum electronics, and shows how the concepts and equations followed in quantum electronics arise from the basic principles of theoretical physics. The book then briefly discusses the interaction of an electromagnetic field with matter. The text also covers the quantum theory of relaxation process when a quantum system approaches an equilibrium state, and explai

  19. Coupling of photocatalytic and biological processes as a contribution to the detoxification of water: catalytic and technological aspects

    OpenAIRE

    Parra Cardona, Sandra Patricia; Pulgarin, César

    2005-01-01

    This research contributes to the study and development of a new degradation technique that couples solar and biological processes for the treatment of biorecalcitrant, nonbiodegradable, and/or toxic organic substances present in the aqueous medium. Efficient physicochemical pretreatments are necessary to modify the structure of the pollutants, by transforming them into less toxic and biodegradable intermediates, allowing then, a biological procedure to complete the degradation of the pollutan...

  20. Interconnection of reactive oxygen species chemistry across the interfaces of atmospheric, environmental, and biological processes.

    Science.gov (United States)

    Anglada, Josep M; Martins-Costa, Marilia; Francisco, Joseph S; Ruiz-López, Manuel F

    2015-03-17

    Oxidation reactions are ubiquitous and play key roles in the chemistry of the atmosphere, in water treatment processes, and in aerobic organisms. Ozone (O3), hydrogen peroxide (H2O2), hydrogen polyoxides (H2Ox, x > 2), associated hydroxyl and hydroperoxyl radicals (HOx = OH and HO2), and superoxide and ozonide anions (O2(-) and O3(-), respectively) are the primary oxidants in these systems. They are commonly classified as reactive oxygen species (ROS). Atmospheric chemistry is driven by a complex system of chain reactions of species, including nitrogen oxides, hydroxyl and hydroperoxide radicals, alkoxy and peroxy radicals, and ozone. HOx radicals contribute to keeping air clean, but in polluted areas, the ozone concentration increases and creates a negative impact on plants and animals. Indeed, ozone concentration is used to assess air quality worldwide. Clouds have a direct effect on the chemical composition of the atmosphere. On one hand, cloud droplets absorb many trace atmospheric gases, which can be scavenged by rain and fog. On the other hand, ionic species can form in this medium, which makes the chemistry of the atmosphere richer and more complex. Furthermore, recent studies have suggested that air-cloud interfaces might have a significant impact on the overall chemistry of the troposphere. Despite the large differences in molecular composition, concentration, and thermodynamic conditions among atmospheric, environmental, and biological systems, the underlying chemistry involving ROS has many similarities. In this Account, we examine ROS and discuss the chemical characteristics common to all of these systems. In water treatment, ROS are key components of an important subset of advanced oxidation processes. Ozonation, peroxone chemistry, and Fenton reactions play important roles in generating sufficient amounts of hydroxyl radicals to purify wastewater. Biochemical processes within living organisms also involve ROS. These species can come from pollutants in

  1. A comparative study of the bacterial community in denitrifying and traditional enhanced biological phosphorus removal processes.

    Science.gov (United States)

    Lv, Xiao-Mei; Shao, Ming-Fei; Li, Chao-Lin; Li, Ji; Gao, Xin-Lei; Sun, Fei-Yun

    2014-09-17

    Denitrifying phosphorus removal is an attractive wastewater treatment process due to its reduced carbon source demand and sludge minimization potential. Two lab-scale sequencing batch reactors (SBRs) were operated in alternating anaerobic-anoxic (A-A) or anaerobic-oxic (A-O) conditions to achieve denitrifying enhanced biological phosphate removal (EBPR) and traditional EBPR. No significant differences were observed in phosphorus removal efficiencies between A-A SBR and A-O SBR, with phosphorus removal rates being 87.9% and 89.0% respectively. The community structures in denitrifying and traditional EBPR processes were evaluated by high-throughput sequencing of the PCR-amplified partial 16S rRNA genes from each sludge. The results obtained showed that the bacterial community was more diverse in A-O sludge than in A-A sludge. Taxonomy and β-diversity analyses indicated that a significant shift occurred in the dominant microbial community in A-A sludge compared with the seed sludge during the whole acclimation phase, while a slight fluctuation was observed in the abundance of the major taxonomies in A-O sludge. One Dechloromonas-related OTU outside the 4 known Candidatus "Accumulibacter" clades was detected as the main OTU in A-A sludge at the stationary operation, while Candidatus "Accumulibacter" dominated in A-O sludge. PMID:24964811

  2. Roles of extracellular polymeric substances in enhanced biological phosphorus removal process.

    Science.gov (United States)

    Li, Wen-Wei; Zhang, Hai-Ling; Sheng, Guo-Ping; Yu, Han-Qing

    2015-12-01

    Enhanced biological phosphorus removal (EBPR) process is known to mainly rely on the ability of phosphorus-accumulating organisms to take up, transform and store excess amount of phosphorus (P) inside the cells. However, recent studies have revealed considerable accumulation of P also in the extracellular polymeric substances (EPS) of sludge, implying a non-negligible role of EPS in P removal by EBPR sludge. However, the contribution of EPS to P uptake and the forms of accumulated extracellular P vary substantially in different studies, and the underlying mechanism of P transformation and transportation in EPS remains poorly understood. This review provides a new recognition into the P removal process in EBPR system by incorporating the role of EPS. It overviews on the characteristics of P accumulation in EPS, explores the mechanism of P transformation and transportation in EBPR sludge and EPS, summarizes the main influential factors for the P-accumulation properties of EPS, and discusses the remaining knowledge gaps and needed future efforts that may lead to better understanding and use of such an EPS role for maximizing P recovery from wastewater. PMID:26143588

  3. Engineered G-protein coupled receptors are powerful tools to investigate biological processes and behaviors

    Directory of Open Access Journals (Sweden)

    Charles D Nichols

    2009-10-01

    Full Text Available Understanding how discreet tissues and neuronal circuits function in relation to the whole organism to regulate physiological processes and behaviors is a fundamental goal of modern biological science. Powerful and important new tools in this discovery process are modified G-protein coupled receptors (GPCRs known as ‘Receptors Activated Solely by Synthetic Ligands (RASSLs,’ and ‘Designer Receptors Exclusively Activated by a Designer Drug (DREADDs.’ Collectively, these are GPCRs modified either through rational design or directed molecular evolution, that do not respond to native ligand, but functionally respond only to synthetic ligands. Importantly, the utility of these receptors is not limited to examination of the role of GPCR-coupled effector signal transduction pathways. Due to the near ubiquitous expression of GPCRs throughout an organism, this technology, combined with whole animal transgenics to selectively target expression, has the ability to regulate activity of discreet tissues and neuronal circuits through effector pathway modulation to study function and behavior throughout the organism. Advantages over other systems currently used to modify in vivo function include the ability to rapidly, selectively and reversibly manipulate defined signal transduction pathways both in short term and long term studies, and no need for specialized equipment due to convenient systemic treatment with activating ligand.

  4. Development of Biological Coal Gasification (MicGAS Process). Topical report, July 1991--February 1993

    Energy Technology Data Exchange (ETDEWEB)

    Srivastava, K.C.

    1993-06-01

    Laboratory and bench scale reactor research carried out during the report period confirms the feasibility of biomethanation of Texas lignite (TxL) and some other low-rank coals to methane by specifically developed unique anaerobic microbial consortia. The data obtained demonstrates specificity of a particular microbial consortium to a given lignite. Development of a suitable microbial consortium is the key to the success of the process. The Mic-1 consortium was developed to tolerate higher coal loadings of 1 and 5% TxL in comparison to initial loadings of 0.01% and 0.1% TxL. Moreover, the reaction period was reduced from 60 days to 14 to 21 days. The cost of the culture medium for bioconversion was reduced by studying the effect of different growth factors on the biomethanation capability of Mic-1 consortium. Four different bench scale bioreactor configurations, namely Rotating Biological Contactor (RBC), Upflow Fluidized Bed Reactor (UFBR), Trickle Bed Reactor (TBR), and Continuously Stirred Tank Reactor (CSTR) were evaluated for scale up studies. Preliminary results indicated highest biomethanation of TxL by the Mic-1 consortium in the CSTR, and lowest in the trickle bed reactor. However, highest methane production and process efficiency were obtained in the RBC.

  5. Evaluation of the processing of dry biological ferment for gamma radiation

    International Nuclear Information System (INIS)

    The developed work had with objectives to demonstrate if it had alteration in the growth of UFC in plate and in the viability of yeasts and total bacteria when dry biological ferment was dealt with by different doses to gamma radiation and under different times storage, to determine the D10 dose for total bacteria and yeasts in this product and to analyzed the processing of this product it promoted some benefit without causing unfeasibility of exactly. The different samples of dry biological ferment had been irradiated at IPEN in a Gammacell - 220 source at 0.5; 1; 2 and 3 kGy doses (dose rate of 3.51 kGy/h). This procedure referring samples to each dose of radiation had been after destined to the microbiological analysis and the test of viability while excessively the samples had been stored the ambient temperature (23 degree C). The increase of the dose of radiation caused a reduction in the counting of yeasts growth, of total bacteria growth and also in the frequency of viable yeast cells, demonstrated by FDA-EB fluorescent method. Beyond of radiation the storage time also it influenced in counting reduction of total bacteria and reduction of frequency of viable cells. According with the analysis of simple linear regression, the dose of radiation necessary to eliminate 90% of the yeast population was between 1.10 and 2.23 kGy and for the bacterial population varied between 2.31 and 2.95 kGy. These results demonstrated clearly the negative points of the application of ionizing radiation in dry biological ferment; therefore the interval of D10 found for total bacteria is superior to found for yeasts. Being thus, the use of this resource for the improvement of the product quality becomes impracticable, since to reduce significantly the bacterial population necessarily we have that to diminish the population of yeasts. With yeasts reduction of we will go significantly to modify the quality and the viability of product. (author)

  6. Kinetic analysis of anaerobic phosphorus release during biological phosphorus removal process

    Institute of Scientific and Technical Information of China (English)

    DOU Junfeng; LUO Guyuan; LIU Xiang

    2007-01-01

    Enhanced biological phosphorus removal(EBPR)is a commonly used and sustainable method for phosphorus removal from wastewater.Poly-β-hydroxybutyrate(PHB),polyphosphate,and glycogen are three kinds of intracellular storage polymers in phosphorus accumulation organisms.The variation of these polymers under different conditions has an apparent influence on anaerobic phosphorus release,which is very important for controlling the performance of EBPR.To obtain the mechanism and kinetic character of anaerobic phosphorus release,a series of batch experiments were performed using the excessively aerated sludge from the aerobic unit of the biological phosphorus removal system in this study.The results showed that the volatile suspended solid(vss)had an increasing trend,while the mixed liquid suspended sludge(MLSS)and ashes were reduced during the anaerobic phosphorus release process.The interruption of anaerobic HAc-uptake and phosphorus-release occurs when the glycogen in the phosphorus-accumulating-organisms is exhausted.Under the condition of lower initial HAc-COD,HAc became the limiting factor after some time for anaerobic HAc uptake.Under the condition of higher initial HAc-COD,HAc uptake was stopped because of the depletion of glycogen in the microorganisms.The mean ratio of △ρP/△ρPHB,△ρGLY/△ρPHB,△ρP/△COD,and △ρPHB/△COD was 0.48,0.50,0.44.and 0.92.respectively,which was nearly the same as the theoretical value.The calibrated kinetic parameters of the HAc-uptake and phosphorus-release model were evaluated as Kgly was 0.005,and KCOD was 3 mg/L.An apparently linear correlation was observed between the ratio of △ρP/△COD and pH of the solution,and the equation between them was obtained in this study.

  7. 29 CFR 780.815 - Basic conditions of exemption; second part, processing of sugar beets, sugar-beet molasses...

    Science.gov (United States)

    2010-07-01

    ... sugar beets, sugar-beet molasses, sugarcane, or maple sap. 780.815 Section 780.815 Labor Regulations... Cotton and Processing of Sugar Beets, Sugar-Beet Molasses, Sugarcane, or Maple Sap into Sugar or Syrup... molasses, sugarcane, or maple sap. Under the second part of section 13(b)(15) of the Act, the...

  8. Basic Auditory Processing Deficits in Dyslexia: Systematic Review of the Behavioral and Event-Related Potential/Field Evidence

    Science.gov (United States)

    Hämäläinen, Jarmo A.; Salminen, Hanne K.; Leppänen, Paavo H. T.

    2013-01-01

    A review of research that uses behavioral, electroencephalographic, and/or magnetoencephalographic methods to investigate auditory processing deficits in individuals with dyslexia is presented. Findings show that measures of frequency, rise time, and duration discrimination as well as amplitude modulation and frequency modulation detection were…

  9. Salt marsh response to the effects of physical and biological processes

    Science.gov (United States)

    Roner, Marcella; D'Alpaos, Andrea; Ghinassi, Massimiliano; Franceschinis, Erica; Realdon, Nicola; Marani, Marco

    2014-05-01

    Salt marshes are widespread features of the tidal landscape governed by the interacting physical and biological processes. These crucially important ecosystems provide valuable services and are currently threatened by the effects of increasing rates of relative sea level rise (RSLR) and decreasing sediment supply. Although a few studies have analyzed the biomorphological evolution of salt marsh systems, a complete understanding of the two-way feedbacks between physical and biological processes is still lacking. The temporal evolution of marsh elevation is governed by the balance between inorganic and organic accretion rates, and the rate of RSLR. Studies based on field observations and modeling suggest that, in equilibrium conditions, marsh inorganic accretion rates, and the related platform elevations, decrease with distance from the main creek whereas the organic deposition gradually increases. In order to analyze salt marsh responses to the effect of physical and biological processes, about 100 sediment samples were collected on the San Felice salt marsh, Venice Lagoon. For each sample, local coordinates, surface elevations and vegetation cover were detected, whereas inorganic and organic sediment content, together with grain size distribution, were determined and analyzed. Loss On Ignition (LOI) and a double treatment with H2O2 and NaClO, were used to estimate the amount of organic matter in each sample. Particle size analysis was carried out on the inorganic fraction with a Mastersizer that uses laser diffraction techniques to measure the grain size. Our results show that the San Felice salt marsh is characterized by a concave-up profile, as commonly displayed by marshes worldwide. Marsh elevation is highest along the boundary and decreases toward the inner marsh. The inorganic deposition, which is maximum along the marsh edge, decreases with distance from the channel network, because as water moves across the marsh, the velocity is reduced and sediment

  10. Basic study of the effect of the extended-cycle process on mammographic screen/film systems. Granularity

    International Nuclear Information System (INIS)

    With single-emulsion films like those used in screen/film mammography, if the developing temperature is higher and/or the processing time is longer than recommended (i.e., extended-cycle process), film speed and/or film contrast are effectively increased. However, it can also be expected that radiographic noise will be increased by the extended-cycle process. Therefore, film graininess and radiographic mottle were investigated with standard- and extended-cycle processes in four single-screen/single-emulsion film systems for mammography, the Konica M-150/New CM, Fuji UM MAMMO Fine/UM-MA HC, Kodak Min-R 2000/Min-R 2000, and Kodak Min-R Medium/Min-R M. Investigation was carried out by measurement of the Wiener spectrum (WS). Results showed that the WS of film graininess increased in all films. The increase was greatest in Min-R M, and the rate of increase at 2.0 cycles/mm was 1.67 or more. The film showing the smallest increase was UM-MA HC, for which the rate of increase was 1.03-1.21. There were cases in which the spatial frequency at a 50 percent contribution rate of film graininess to radiographic mottle changed to a low spatial frequency. When only the increase in WS of radiographic mottle was examined, the increase was greatest in Min-R Medium/Min-R M, and the rate of increase at 2.0 cycles/mm was 1.65 or more. Min-R 2000/Min-R 2000 showed the least increase, and the rate of increase was 1.12-1.24. Increases in WS values were larger at 0.1-0.5 cycle/mm than at 2.0 cycles/mm when investigating the influence of trend using film graininess, and roller marks and so on could not be specified as a cause. (author)

  11. Vibrations, Quanta and Biology

    CERN Document Server

    Huelga, S F

    2013-01-01

    Quantum biology is an emerging field of research that concerns itself with the experimental and theoretical exploration of non-trivial quantum phenomena in biological systems. In this tutorial overview we aim to bring out fundamental assumptions and questions in the field, identify basic design principles and develop a key underlying theme -- the dynamics of quantum dynamical networks in the presence of an environment and the fruitful interplay that the two may enter. At the hand of three biological phenomena whose understanding is held to require quantum mechanical processes, namely excitation and charge transfer in photosynthetic complexes, magneto-reception in birds and the olfactory sense, we demonstrate that this underlying theme encompasses them all, thus suggesting its wider relevance as an archetypical framework for quantum biology.

  12. Nutritional Systems Biology

    DEFF Research Database (Denmark)

    Jensen, Kasper

    and network biology has the potential to increase our understanding of how small molecules affect metabolic pathways and homeostasis, how this perturbation changes at the disease state, and to what extent individual genotypes contribute to this. A fruitful strategy in approaching and exploring the field...... biology research. The paper also shows as a proof-of-concept that a systems biology approach to diet is meaningful and demonstrates some basic principles on how to work with diet systematic. The second chapter of this thesis we developed the resource NutriChem v1.0. A foodchemical database linking...... sites of diet on the disease pathway. We propose a framework for interrogating the critical targets in colon cancer process and identifying plant-based dietary interventions as important modifiers using a systems chemical biology approach. The fifth chapter of the thesis is on discovering of novel anti...

  13. Mechanical Biological Treatment

    DEFF Research Database (Denmark)

    Bilitewski, B-; Oros, Christiane; Christensen, Thomas Højlund

    The basic processes and technologies of composting and anaerobic digestion, as described in the previous chapters, are usually used for specific or source-separated organic waste flows. However, in the 1990s mechanical biological waste treatment technologies (MBT) were developed for unsorted or...... residual waste (after some recyclables removed at the source). The concept was originally to reduce the amount of waste going to landfill, but MBT technologies are today also seen as plants recovering fuel as well as material fractions. As the name suggests the technology combines mechanical treatment...... technologies (screens, sieves, magnets, etc.) with biological technologies (composting, anaerobic digestion). Two main technologies are available: Mechanical biological pretreatment (MBP), which first removes an RDF fraction and then biologically treats the remaining waste before most of it is landfilled, and...

  14. Mechanical Biological Treatment

    DEFF Research Database (Denmark)

    Bilitewski, B-; Oros, Christiane; Christensen, Thomas Højlund

    2011-01-01

    The basic processes and technologies of composting and anaerobic digestion, as described in the previous chapters, are usually used for specific or source-separated organic waste flows. However, in the 1990s mechanical biological waste treatment technologies (MBT) were developed for unsorted or...... residual waste (after some recyclables removed at the source). The concept was originally to reduce the amount of waste going to landfill, but MBT technologies are today also seen as plants recovering fuel as well as material fractions. As the name suggests the technology combines mechanical treatment...... technologies (screens, sieves, magnets, etc.) with biological technologies (composting, anaerobic digestion). Two main technologies are available: Mechanical biological pretreatment (MBP), which first removes an RDF fraction and then biologically treats the remaining waste before most of it is landfilled, and...

  15. Basic electronics

    CERN Document Server

    Tayal, DC

    2010-01-01

    The second edition of this book incorporates the comments and suggestions of my friends and students who have critically studied the first edition. In this edition the changes and additions have been made and subject matter has been rearranged at some places. The purpose of this text is to provide a comprehensive and up-to-date study of the principles of operation of solid state devices, their basic circuits and application of these circuits to various electronic systems, so that it can serve as a standard text not only for universities and colleges but also for technical institutes. This book

  16. Regression Basics

    CERN Document Server

    Kahane, Leo H

    2007-01-01

    Using a friendly, nontechnical approach, the Second Edition of Regression Basics introduces readers to the fundamentals of regression. Accessible to anyone with an introductory statistics background, this book builds from a simple two-variable model to a model of greater complexity. Author Leo H. Kahane weaves four engaging examples throughout the text to illustrate not only the techniques of regression but also how this empirical tool can be applied in creative ways to consider a broad array of topics. New to the Second Edition Offers greater coverage of simple panel-data estimation:

  17. Advanced low carbon-to-nitrogen ratio wastewater treatment by electrochemical and biological coupling process.

    Science.gov (United States)

    Deng, Shihai; Li, Desheng; Yang, Xue; Zhu, Shanbin; Xing, Wei

    2016-03-01

    Nitrogen pollution in ground and surface water significantly affects the environment and its organisms, thereby leading to an increasingly serious environmental problem. Such pollution is difficult to degrade because of the lack of carbon sources. Therefore, an electrochemical and biological coupling process (EBCP) was developed with a composite catalytic biological carrier (CCBC) and applied in a pilot-scale cylindrical reactor to treat wastewater with a carbon-to-nitrogen (C/N) ratio of 2. The startup process, coupling principle, and dynamic feature of the EBCP were examined along with the effects of hydraulic retention time (HRT), dissolved oxygen (DO), and initial pH on nitrogen removal. A stable coupling system was obtained after 51 days when plenty of biofilms were cultivated on the CCBC without inoculation sludge. Autotrophic denitrification, with [Fe(2+)] and [H] produced by iron-carbon galvanic cells in CCBC as electron donors, was confirmed by equity calculation of CODCr and nitrogen removal. Nitrogen removal efficiency was significantly influenced by HRT, DO, and initial pH with optimal values of 3.5 h, 3.5 ± 0.1 mg L(-1), and 7.5 ± 0.1, respectively. The ammonia, nitrate, and total nitrogen (TN) removal efficiencies of 90.1 to 95.3 %, 90.5 to 99.0 %, and 90.3 to 96.5 % were maintained with corresponding initial concentrations of 40 ± 2 mg L(-1) (NH3-N load of 0.27 ± 0.01 kg NH3-N m(-3) d(-1)), 20 ± 1 mg L(-1), and 60 ± 2 mg L(-1) (TN load of 0.41 ± 0.02 kg TN m(-3) d(-1)). Based on the Eckenfelder model, the kinetics equation of the nitrogen transformation along the reactor was N e  = N 0 exp (-0.04368 h/L(1.8438)). Hence, EBCP is a viable method for advanced low C/N ratio wastewater treatment. PMID:26564190

  18. How a seven-year ocean observatory is influencing our understanding of physical and biological processes in northern Arabian Sea?

    Science.gov (United States)

    Wang, Z.; Dimarco, S. F.; Al-Kharusi, L. H.; Belabbassi, L.; Ingle, S.

    2012-12-01

    An ocean observatory—consisting of a real-time, cabled system in the Sea of Oman and an internally-recording, autonomous mooring system recently upgraded to a cabled system in the northern Arabian Sea—was installed in 2005. The two arrays have collected a continuous seven-year time series record of current velocities, temperature, pressure, salinity, dissolved oxygen, and turbidity in a region where several water masses converge and subsequently spread southward to the Indian Ocean. The systems have provided new insights into physical and biological oceanographic processes of the northwestern Indian Ocean, which is strongly affected by the monsoonal oscillation, along with lessons learned and best practices in the operation and application of ocean observatories to ocean science. In this presentation, we show four recent studies for the scientific highlights derived from the data collected from the two systems and supporting data from other sources. The topics of those four studies include: (1) The seasonality associated with the upwelling of low oxygen water on the northern Oman coast and insights on the inter-annual variability of this process; (2) The deep-water oceanic responses excited by the passage of Cyclone Gonu, the largest-ever recorded cyclone in the region; (3) The temporal and spatial evolution of an acoustic backscatter layer; (4) The pulse-like salinity/temperature events in the northeastern Arabian Sea and Gulf of Oman. In summary, the observatory provides a long-term time series with which to perform basic scientific research related to characterizing the general dynamical patterns of the region, quantifying seasonal variability of water column properties, and establishing a time series of sufficient duration to deduce the potential impacts of climate change. Furthermore, observations taken over the full, 20+ year lifetime of a typical cabled system will be extremely useful for evaluating numerical ocean circulation and coupled atmospheric

  19. Advanced treatment of biologically pretreated coking wastewater by intensified zero-valent iron process (IZVI) combined with anaerobic filter and biological aerated filter (AF/BAF)

    Institute of Scientific and Technical Information of China (English)

    潘碌亭; 韩悦; 吴锦峰

    2015-01-01

    Experiments were conducted to investigate the behavior of the sequential system of intensified zero-valent iron process (IZVI) and anaerobic filter and biological aerated filter (AF/BAF) reactors for advanced treatment of biologically pretreated coking wastewater. Particular attention was paid to the performance of the integrated system for the removal of chemical oxygen demand (COD), ammonia nitrogen (NH3-N) and total nitrogen (TN). The average removal efficiencies of COD, NH3-N and TN were 76.28%, 96.76% and 59.97%, with the average effluent mass concentrations of 56, 0.53 and 18.83 mg/L, respectively, reaching the first grade of the national discharge standard. Moreover, the results of gas chromatography/mass spectrum (GC/MS) and gel permeation chromatography (GPC) analysis demonstrated that the refractory organic compounds with high relative molecular mass were partly removed in IZVI process by the function of oxidation-reduction, flocculation and adsorption which could also enhance the biodegradability of the system effluent. The removal efficiencies of NH3-N and TN were achieved mainly in the subsequent AF/BAF reactors by nitrification and denitrification. Overall, the results obtained show that the application of IZVI in combination with AF/BAF is a promising technology for advanced treatment of biologically pretreated coking wastewater.

  20. Processes that Drove the Transition from Chemistry to Biology: Concepts and Evidence

    Science.gov (United States)

    Pohorille, Andrew

    2012-01-01

    above background was evolved in vitro. This enzyme does not look like any contemporary protein. It is very flexible and its structure is kept together just by a single salt bridge between a charged residue and a coordinating zinc. A similar picture emerges from studies of simple transmembrane channels that mimic those in ancestral cells. Again, they are extremely flexible and do not form a conventional pore. Yet, they efficiently mediate ion transport. Studies on simple proteins that are on-going in several laboratories hold promise of revealing crucial links between chemical and biological catalysis and other ubiquitous cell functions. Interaction between composition, growth and division of protobiologically relevant vesicles and metabolic reactions that they encapsulate is an example of coupling between simple functions that promotes reproduction and evolution. Recent studies have demonstrated possible mechanisms by which vesicles might have evolved their composition from fatty acids to phospholipids, thus facilitating a number of new cellular functions. Conversely, it has been also demonstrated that an encapsulated metabolism might drive vesicle division. These are, again, examples of processes that might have driven the transition from chemistry to biology.

  1. An efficient process for wastewater treatment to mitigate free nitrous acid generation and its inhibition on biological phosphorus removal

    OpenAIRE

    Zhao, Jianwei; Wang, Dongbo; Li, Xiaoming; Yang, Qi; Chen, Hongbo; Zhong, Yu; An, Hongxue; Zeng, Guangming

    2015-01-01

    Free nitrous acid (FNA), which is the protonated form of nitrite and inevitably produced during biological nitrogen removal, has been demonstrated to strongly inhibit the activity of polyphosphate accumulating organisms (PAOs). Herein we reported an efficient process for wastewater treatment, i.e., the oxic/anoxic/oxic/extended-idle process to mitigate the generation of FNA and its inhibition on PAOs. The results showed that this new process enriched more PAOs which thereby achieved higher ph...

  2. A DO- and pH-based early warning system of nitrification inhibition for biological nitrogen removal processes.

    Science.gov (United States)

    Hong, Seil; Choi, Il; Lim, Byung Jin; Kim, Hyunook

    2012-01-01

    In Korea, more than 80% of municipal wastewater treatment plants (WWTPs) with capacities of 500 m3·d-1 or more are capable of removing nitrogen from wastewater through biological nitrification and denitrification processes. Normally, these biological processes show excellent performance, but if a toxic chemical is present in the influent to a WWTP, the biological processes (especially, the nitrification process) may be affected and fail to function normally; nitrifying bacteria are known very vulnerable to toxic substances. Then, the toxic compound as well as the nitrogen in wastewater may be discharged into a receiving water body without any proper treatment. Moreover, it may take significant time for the process to return back its normal state. In this study, a DO- and pH-based strategy to identify potential nitrification inhibition was developed to detect early the inflow of toxic compounds to a biological nitrogen removal process. This strategy utilizes significant changes observed in the oxygen uptake rate and the pH profiles of the mixed liquor when the activity of nitrifying bacteria is inhibited. Using the strategy, the toxicity from test wastewater with 2.5 mg·L-1 Hg2+, 0.5 mg·L-1 allythiourea, or 0.25 mg·L-1 chloroform could be successfully detected. PMID:23443381

  3. Removal of Refractory Organics from Biologically Treated Landfill Leachate by Microwave Discharge Electrodeless Lamp Assisted Fenton Process

    Directory of Open Access Journals (Sweden)

    Jiuyi Li

    2015-01-01

    Full Text Available Biologically treated leachate usually contains considerable amount of refractory organics and trace concentrations of xenobiotic pollutants. Removal of refractory organics from biologically treated landfill leachate by a novel microwave discharge electrodeless lamp (MDEL assisted Fenton process was investigated in the present study in comparison to conventional Fenton and ultraviolet Fenton processes. Conventional Fenton and ultraviolet Fenton processes could substantially remove up to 70% of the refractory organics in a membrane bioreactor treated leachate. MDEL assisted Fenton process achieved excellent removal performance of the refractory components, and the effluent chemical oxygen demand concentration was lower than 100 mg L−1. Most organic matters were transformed into smaller compounds with molecular weights less than 1000 Da. Ten different polycyclic aromatic hydrocarbons were detected in the biologically treated leachate, most of which were effectively removed by MDEL-Fenton treatment. MDEL-Fenton process provides powerful capability in degradation of refractory and xenobiotic organic pollutants in landfill leachate and could be adopted as a single-stage polishing process for biologically treated landfill leachate to meet the stringent discharge limit.

  4. Brain Basics

    Medline Plus

    Full Text Available ... Announcements Funding Strategy for Grants Clinical Research Application Process Managing Grants Training Labs at NIMH Labs at ... our original set of DNA. Sometimes this copying process is imperfect, leading to a gene mutation that ...

  5. Searching the literature for proteins facilitates the identification of biological processes, if advanced methods of analysis are linked

    DEFF Research Database (Denmark)

    Bauer, Johann; Bussen, Markus; Wise, Petra;

    2016-01-01

    exposed to microgravity conditions. RESEARCH DESIGN AND METHODS: We retrieved publications about microgravity related studies on each type of cell, extracted the proteins mentioned therein and analyzed them subsequently using Pathway Studio aiming to identify biological processes affected by microgravity...... of gravity is common to all the different cell types, at least some of the 19 biological processes could play a role in cellular adaption to microgravity. The application of computer programs, helping to extract and analyze proteins and genes mentioned in publications will become essential for scientists...

  6. Fröhlich Condensate: Emergence of Synergetic Dissipative Structures in Information Processing Biological and Condensed Matter Systems

    Directory of Open Access Journals (Sweden)

    Roberto Luzzi

    2012-10-01

    Full Text Available We consider the case of a peculiar complex behavior in open boson systems sufficiently away from equilibrium, having relevance in the functioning of information-processing biological and condensed matter systems. This is the so-called Fröhlich–Bose–Einstein condensation, a self-organizing-synergetic dissipative structure, a phenomenon apparently working in biological processes and present in several cases of systems of boson-like quasi-particles in condensed inorganic matter. Emphasis is centered on the quantum-mechanical-statistical irreversible thermodynamics of these open systems, and the informational characteristics of the phenomena.

  7. Epitaxially grown crystalline silicon thin-film solar cells reaching 16.5% efficiency with basic cell process

    International Nuclear Information System (INIS)

    We report about the current performance of crystalline silicon thin-film (cSiTF) solar cells that are a very attractive alternative to conventional wafer-based silicon solar cells if sufficiently high cell efficiencies are achieved at acceptable cost of production. Applying a standard cell process (diffused POCl3 emitter, front contacts by photolithography, no surface texture) to thin-films deposited with a lab-type reactor, specifically designed for high-throughput photovoltaic applications, on highly-doped Cz substrates we routinely obtain efficiencies above 16%. On 1 Ω cm FZ material substrates we reach efficiencies up to 18.0%, which is among the highest thin-film efficiencies ever reported. Additionally, a comparison to microelectronic-grade epitaxially grown cSiTF material underlines the excellent electrical quality of the epitaxial layers deposited.

  8. [Progress in down-stream processing of biologically produced 1,3-propanediol].

    Science.gov (United States)

    Wu, Ruchun; Xu, Yunzhen; Liu, Dehua

    2011-03-01

    1,3-propanediol is an important raw material in chemical industry. Microbial conversion of glycerol or glucose into 1,3-propanediol has been given much attention due to its renewable resource, mild reaction conditions, and other advantages. It is a challenge to efficiently separate 1,3-propanediol from a mixture of multiple components, such as 1,3-propanediol, 2,3-butanediol, water, residual glycerol, ethanol, macromolecules and salts, for the reason that 1,3-propanediol, glycerol and 2,3-butanediol are all very hydrophilic and have intense polarity. The conventional evaporation and distillation techniques used in the purification of 1,3-propanediol suffer from the problem of high energy consumption and low recovery. It makes the recovery of 1,3-propanediol from a fermentation broth become a bottleneck in industrial production. The down-stream processing of biologically produced 1,3-propanediol mainly includes the removal of protein, salts, water and other impurities. This paper analyze the research progress of these separation technologies and point out the developing direction worth further investigation. PMID:21650033

  9. Integrated physicochemical and biological treatment process for fluoride and phosphorus removal from fertilizer plant wastewater.

    Science.gov (United States)

    Gouider, Mbarka; Mlaik, Najwa; Feki, Mongi; Sayadi, Sami

    2011-08-01

    The phosphate fertilizer industry produces highly hazardous and acidic wastewaters. This study was undertaken to develop an integrated approach for the treatment of wastewaters from the phosphate industry. Effluent samples were collected from a local phosphate fertilizer producer and were characterized by their high fluoride and phosphate content. First, the samples were pretreated by precipitation of phosphate and fluoride ions using hydrated lime. The resulting low- fluoride and phosphorus effluent was then treated with the enhanced biological phosphorus removal (EBPR) process to monitor the simultaneous removal of carbon, nitrogen, and phosphorus. Phosphorus removal included a two-stage anaerobic/aerobic system operating under continuous flow. Pretreated wastewater was added to the activated sludge and operated for 160 days in the reactor. The operating strategy included increasing the organic loading rate (OLR) from 0.3 to 1.2 g chemical oxygen demand (COD)/L.d. The stable and high removal rates of COD, NH4(+)-N, and PO4(3-)-P were then recorded. The mean concentrations of the influent were approximately 3600 mg COD/L, 60 mg N/L, and 14 mg P/L, which corresponded to removal efficiencies of approximately 98%, 86%, and 92%, respectively. PMID:21905410

  10. Biological Denitrification of High Nitrate Processing Wastewaters from Explosives Production Plant.

    Science.gov (United States)

    Cyplik, Paweł; Marecik, Roman; Piotrowska-Cyplik, Agnieszka; Olejnik, Anna; Drożdżyńska, Agnieszka; Chrzanowski, Lukasz

    2012-05-01

    Wastewater samples originating from an explosives production plant (3,000 mg N l(-1) nitrate, 4.8 mg l(-1) nitroglycerin, 1.9 mg l(-1) nitroglycol and 1,200 mg l(-1) chemical oxygen demand) were subjected to biological purification. An attempt to completely remove nitrate and to decrease the chemical oxygen demand was carried out under anaerobic conditions. A soil isolated microbial consortium capable of biodegrading various organic compounds and reduce nitrate to atmospheric nitrogen under anaerobic conditions was used. Complete removal of nitrates with simultaneous elimination of nitroglycerin and ethylene glycol dinitrate (nitroglycol) was achieved as a result of the conducted research. Specific nitrate reduction rate was estimated at 12.3 mg N g(-1) VSS h(-1). Toxicity of wastewater samples during the denitrification process was studied by measuring the activity of dehydrogenases in the activated sludge. Mutagenicity was determined by employing the Ames test. The maximum mutagenic activity did not exceed 0.5. The obtained results suggest that the studied wastewater samples did not exhibit mutagenic properties. PMID:22593607

  11. New Method for Monitoring the Process of Freeze Drying of Biological Materials.

    Science.gov (United States)

    Alkeev, Nikolay; Averin, Stanislav; von Gratowski, Svetlana

    2015-12-01

    A capacitive sensor was proposed and tested for the monitoring and control of a freeze drying process of a vaccine against the Newcastle disease of birds. The residual moisture of the vaccine was measured by the thermogravimetric method. The vaccine activity was determined by titration in chicken embryos. It was shown that, at the stages of freezing and primary drying, a capacitive sensor measured the fraction of unfrozen liquid phase in a material and allowed one to control the sublimation stage of drying in an optimal way. This prevented the foaming of the material and shortened the total drying time approximately twice. The control range at the sublimation stage of drying expanded up to -70°C. It was found at the final stage of drying that the signal of a capacitive sensor passed through a maximum value. We supposed that this maximum corresponds to the minimum of intramolecular mobility of biological macromolecules and hence to the optimal residual moisture of the material, which ensures long-term preservation of its activity. We also suppose that using the capacitive sensor at the final stage of drying allows one to more precisely detect the time when the residual moisture of dried material reaches the optimal value. PMID:26022547

  12. NifH: Structural and Mechanistic Similarities with Proteins Involved in Diverse Biological Processes

    Directory of Open Access Journals (Sweden)

    Surobhi Lahiri

    2008-01-01

    Full Text Available The NifH protein is a subunit of the nitrogenase enzyme that catalyzes the reduction of atmospheric nitrogen to ammonia. This protein contains highly conserved regions including the nucleotide binding sites, metal center ligands and the Switch I and Switch II domains. A number of proteins have structural and mechanistic similarities as well as evolutionary relationships with the NifH protein, notable among them being: light independent protochlorophyllide (Pchlide reductase (ChlL/FrxC or bChL, arsenite pump ATPase (ArsA, 2-hydroxyglutaryl dehydratase Component A (CompA involved in glutamate degradation and MinD that functions in spatial regulation of cell division. Although involved in very diverse biological processes, these proteins share an underlying common structural framework. This review mainly focuses on the structural similarities of these proteins with the NifH protein and discusses recent reports of complementation studies involving NifH and few of the proteins mentioned.

  13. DECOLORIZATION AND BIOLOGICAL DEGRADATION OF AZO DYE REACTIVE RED2 BY ANAEROBIC/AEROBIC SEQUENTIAL PROCESS

    Directory of Open Access Journals (Sweden)

    A. Naimabadi ، H. Movahedian Attar ، A. Shahsavani

    2009-04-01

    Full Text Available This study investigates the anaerobic treatability of reactive Red2 in an anaerobic/aerobic sequential process. Laboratory scale anaerobic baffled reactor and fixed activated sludge reactor were operated at different organic loadings and hydraulic retention times. The effects of shock dye concentration on the chemical oxygen demand and color removal efficiencies were investigated in the anaerobic baffled reactor. The effect of hydraulic retention time on the color and chemical oxygen demand removal efficiencies were also investigated in the aerobic reactor. The studies were carried out in continuous mode and the effluent of the anaerobic baffled reactor was used as feed for the fixed activated sludge reactor. Chemical oxygen demand removal efficiency of 54.5% was obtained at HRT =1 day in the anaerobic reactor. The average color removal was 89.5%. Chemical oxygen demand removal efficiency of 69% was obtained at HRT =7 h in the aerobic fixed activated sludge reactor. A slight decrease of the color was also observed in the aerobic reactor. This investigation has shown that successful treatment of a highly colored wastewater is possible in the anaerobic baffled reactor. Also the results showed that, anaerobic biological system has higher efficiency in dye removal than fixed activated sludge system, while aerobic system has higher efficiency in chemical oxygen demand removal comparing with the anaerobic baffled reactor.

  14. Performance of biological phosphorus removal and characteristics of microbial community in the oxic-settling-anaerobic process by FISH analysis

    Institute of Scientific and Technical Information of China (English)

    Jian-fang WANG; Qing-liang ZHAO; Wen-biao JIN; Shi-jie YOU; Jin-na ZHANG

    2008-01-01

    Performance of biological phosphorus removal in the oxic-settling-anaerobic (OSA) process was investigated. Cell staining and fluorescent in situ hybridization (FISH) were used to analyze characteristics and microbial community of sludge.Experimental results showed that phosphorus removal efficiency was near 60% and the amount of biological phosphorus accumulation in aerobic sludge of the OSA system was up to 26.9 mg/g. Biological phosphorus removal efficiency was partially inhibited by carbon sources in the continuous OSA system. Contrasted to the OSA system, biological phosphorus removal efficiency was enhanced by 14% and the average total phosphorus (TP) contents of aerobic sludge were increased by 0.36 mg/g when sufficient carbon sources were supplied in batch experiments. Staining methods indicated that about 35% of microorganisms had typical characteristics of phosphorus accumulating organisms (PAOs). FISH analysis demonstrated that PAOMIX-binding bacteria were predominant microbial communities in the OSA system, which accounted for around 28% of total bacteria.

  15. Raman scattering in GaN, AlN and AlGaN. Basic material properties, processing and devices

    CERN Document Server

    Hayes, J M

    2002-01-01

    dependence of the phonon frequencies and lifetimes was measured from 10 K to 1275 K. Empirical fitting and theoretical modelling of the temperature dependence was performed. The results have application for the monitoring of temperature in (Ga/AI)N. The E sub 2 (high) phonon frequency of GaN measured by micro-Raman spectroscopy was used to monitor local temperatures in active AIGaN/GaN hetero-structure field effect transistor devices (HFETs). The temperature rise in the active area of devices on sapphire substrates was significantly higher than for devices on 4H-SiC substrates. Temperatures were monitored to the point of device failure to gain insight into degradation mechanisms. GaN, AIN and AIGaN are very promising materials for high-power, high-temperature and high-frequency electronic device applications but many of their material properties and the effects of processing steps for device fabrication have not yet been fully investigated. AIGaN/GaN films were annealed at temperatures of 800 to 1300 deg C in...

  16. Comparison of nuclear parameters for a LMFBR heterogenous Benchmark core. Influence of different basic data sets and processing codes

    International Nuclear Information System (INIS)

    A LMFBR heterogenous core model was a few years ago proposed by CEA as a Benchmark core for comparative calculations. The geometrical RZ model consists of three radial fissile zones of the same enrichment divided at the midplane by an axial slice of internal breeder material. The fissile zones are separated by three internal breeder zones, one central zone and two breeder rings. The core has been studied with 2D diffusion codes in 10 to 25 energy groups. Comparisons have been made between CEA (CARNAVAL III) INTERATOM (KEKINR) and STUDSVIK (ENDF IV) solutions. THe spread in k (sub)eff is 1.7 percent with the lowest value for STUDSVIK (ENDF IV) and the highest value for INTERATOM (KFKINR). The spread in breeding ratio is 0.03 with the highest value for STUDSVIK and lowest for INTERATOM. This spread in k (sub) eff and BR is of the same magnitude as for homogenous benchmark core. The variations in the sodium void effect between CARNAVAL III, KFKINR and ENDF IV solutions are rather similar for the heterogenous and homogenous benchmark cores. Comparison of one-group core fission and capture cross sections indicate a dominating influence of the processing codes. The influence on k (sub) eff seem to be smaller due to cancelling effects. (author)

  17. Determination of Basic Structure-Property Relations for Processing and Modeling in Advanced Nuclear Fuel: Microstructure Evolution and Mechanical Properties

    International Nuclear Information System (INIS)

    The project objective is to study structure-property relations in solid solutions of nitrides and oxides with surrogate elements to simulate the behavior of fuels of inert matrix fuels of interest to the Advanced Fuel Cycle Initiative (AFCI), with emphasis in zirconium-based materials. Work with actual fuels will be carried out in parallel in collaboration with Los Alamos National Laboratory (LANL). Three key aspects will be explored: microstructure characterization through measurement of global texture evolution and local crystallographic variations using Electron Backscattering Diffraction (EBSD); determination of mechanical properties, including fracture toughness, quasi-static compression strength, and hardness, as functions of load and temperature, and, finally, development of structure-property relations to describe mechanical behavior of the fuels based on experimental data. Materials tested will be characterized to identify the mechanisms of deformation and fracture and their relationship to microstructure and its evolution. New aspects of this research are the inclusion of crystallographic information into the evaluation of fuel performance and the incorporation of statistical variations of microstructural variables into simplified models of mechanical behavior of fuels that account explicitly for these variations. The work is expected to provide insight into processing conditions leading to better fuel performance and structural reliability during manufacturing and service, as well as providing a simplified testing model for future fuel production

  18. Gene-ontology enrichment analysis in two independent family-based samples highlights biologically plausible processes for autism spectrum disorders.

    LENUS (Irish Health Repository)

    Anney, Richard J L

    2012-02-01

    Recent genome-wide association studies (GWAS) have implicated a range of genes from discrete biological pathways in the aetiology of autism. However, despite the strong influence of genetic factors, association studies have yet to identify statistically robust, replicated major effect genes or SNPs. We apply the principle of the SNP ratio test methodology described by O\\'Dushlaine et al to over 2100 families from the Autism Genome Project (AGP). Using a two-stage design we examine association enrichment in 5955 unique gene-ontology classifications across four groupings based on two phenotypic and two ancestral classifications. Based on estimates from simulation we identify excess of association enrichment across all analyses. We observe enrichment in association for sets of genes involved in diverse biological processes, including pyruvate metabolism, transcription factor activation, cell-signalling and cell-cycle regulation. Both genes and processes that show enrichment have previously been examined in autistic disorders and offer biologically plausibility to these findings.

  19. Monitoring of environmental effects and process performance during biological treatment of sediment from the Petroleum Harbour in Amsterdam

    International Nuclear Information System (INIS)

    A full-scale (470 m3) process for biological treatment of dredging spoil from the Petroleum Harbour in Amsterdam has been monitored during a pilot project. The dredging spoil was heavily polluted with polycyclic aromatic hydrocarbons (PAH) and mineral oil. The remediation chain involved dredging, transport of dredged spoil, hydrocyclone separation, froth flotation of the coarse particles, and biological treatment of the silt fraction (<20 μm) in stirred bioreactors. The independent monitoring was aimed at recording the environmental effects, product quality and performance of the biological process. Hydrocyclone separation (cut point 20 m) resulted in two bulk streams: 65% sand and 30% silt (based on total dry weight of the input). (author)

  20. Reverse micelle mediated synthesis, processing, mechanical and biological characterization of hydroxyapatite nanopowders for bone graft application

    Science.gov (United States)

    Banerjee, Ashis

    Hydroxyapatite (HA) is the most widely used bioceramic material in bone graft applications because of its compositional similarity with natural bone. However, synthetic HA does not show similar mechanical and biological properties to the inorganic component of bone. Properties of ceramic material depend on starting materials, processing techniques, densification and microstructure of the final product. The objective of this research was to process HA whisker reinforced HA composite using HA nanopowders and whiskers. HA nanopowders with different length scale and morphology were synthesized by reverse micelle system using NP5 and NP12 as surfactants and cyclohexane as organic solvent. The lowest average aspect ratio was 1.357+/-0.39 with average particle size of 66 nm and the highest average aspect ratio was 7.277+/-3.227 with average length of 150 nm and width of 20 nm, were synthesized. Micron sized HA whiskers with aspect ratio between 20 and 50, average particle length of 15 mum and width of 400 nm was synthesized using urea as a precipitating agent. Desired microstructure was obtained after sintering with spherical HA nanopowder and whiskers along with dopants. Addition of whiskers decreased density of the sintered compacts. However, at 10 wt% whisker content sample showed microhardness and fracture toughness of 3.6 GPa and 1.5 MPa.m1/2, respectively, and a compressive strength of 80 MPa was obtained. Mineralization study in simulated body fluid (SBF) showed formation of apatite layer on the dense HA compacts indicating a good tendency of bond formation with natural bone. Cytotoxicity results showed excellent cell attachment on the HA surface. In the Appendices, 3 journal articles have been attached which describe synthesis, processing and characterization of undoped and doped PZT nanopowders. Free standing and agglomerated PZT nanopowders were synthesized by the sucrose templated method and the citrate nitrate autocombustion method. Particle size in the range