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Sample records for bacterially induced precipitation

  1. Bacterially induced precipitation of CaCO sub 3 : An example from studies of cyanobacterial mats

    Energy Technology Data Exchange (ETDEWEB)

    Chafetz, H.S.

    1990-04-30

    Bacteria induce the precipitation of calcium carbonate in the laboratory and in nature by altering their chemical environment. Geologists are recognizing the possibility that bacterially induced precipitates may form significant mineral deposits, unfortunately, there are currently no sound criteria by which they can be recognized in recent sediments, or in the rock record. Cultures of aerobic and facultative bacteria from cyanobacterial mats on Andros Island, Bahamas, and Baffin Bay, Texas, induced the precipitation of calcium carbonate under controlled conditions. Crusts, the largest features formed, are composed of 5--200{mu}m diameter bundles which are, in turn, composed of numerous individual crystals. The smallest observed features are 0.1--0.4{mu}m spheres and rods which comprise some individual crystals and crystal bundles. Crystal bundles resembling rhombohedra, tetragonal disphenoids, tetragonal dipyramids, and calcite dumbbells appear to be uniquely bacterial in origin, and they have all been observed in recent sediments. Swollen rods, discs, curved dumbbells, and 50--200{mu}m optically continuous crystals resembling brushes may be uniquely bacterial in origin, however, they have not been reported by other laboratories nor observed in natural settings. Presence of any of these forms in recent sediments should be taken as strong evidence for bacterial influence. Spheres and aragonite dumbbells have also been observed in natural environments, however, they are not always bacterial in origin. Precipitation of calcium carbonate occurs preferentially on dead cyanobacteria in the presence of bacteria. Lithification of algal mats to form stromatolites may take place in the zone of decaying organic matter due to bacterial activity.

  2. Bacterially induced precipitation of CaCO{sub 3}: An example from studies of cyanobacterial mats. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Chafetz, H.S.

    1990-04-30

    Bacteria induce the precipitation of calcium carbonate in the laboratory and in nature by altering their chemical environment. Geologists are recognizing the possibility that bacterially induced precipitates may form significant mineral deposits, unfortunately, there are currently no sound criteria by which they can be recognized in recent sediments, or in the rock record. Cultures of aerobic and facultative bacteria from cyanobacterial mats on Andros Island, Bahamas, and Baffin Bay, Texas, induced the precipitation of calcium carbonate under controlled conditions. Crusts, the largest features formed, are composed of 5--200{mu}m diameter bundles which are, in turn, composed of numerous individual crystals. The smallest observed features are 0.1--0.4{mu}m spheres and rods which comprise some individual crystals and crystal bundles. Crystal bundles resembling rhombohedra, tetragonal disphenoids, tetragonal dipyramids, and calcite dumbbells appear to be uniquely bacterial in origin, and they have all been observed in recent sediments. Swollen rods, discs, curved dumbbells, and 50--200{mu}m optically continuous crystals resembling brushes may be uniquely bacterial in origin, however, they have not been reported by other laboratories nor observed in natural settings. Presence of any of these forms in recent sediments should be taken as strong evidence for bacterial influence. Spheres and aragonite dumbbells have also been observed in natural environments, however, they are not always bacterial in origin. Precipitation of calcium carbonate occurs preferentially on dead cyanobacteria in the presence of bacteria. Lithification of algal mats to form stromatolites may take place in the zone of decaying organic matter due to bacterial activity.

  3. Inducing mineral precipitation in groundwater by addition of phosphate

    Directory of Open Access Journals (Sweden)

    Hartmann Thomas

    2011-10-01

    Full Text Available Abstract Background Induced precipitation of phosphate minerals to scavenge trace elements from groundwater is a potential remediation approach for contaminated aquifers. The success of engineered precipitation schemes depends on the particular phases generated, their rates of formation, and their long term stability. The purpose of this study was to examine the precipitation of calcium phosphate minerals under conditions representative of a natural groundwater. Because microorganisms are present in groundwater, and because some proposed schemes for phosphate mineral precipitation rely on stimulation of native microbial populations, we also tested the effect of bacterial cells (initial densities of 105 and 107 mL-1 added to the precipitation medium. In addition, we tested the effect of a trace mixture of propionic, isovaleric, formic and butyric acids (total concentration 0.035 mM. Results The general progression of mineral precipitation was similar under all of the study conditions, with initial formation of amorphous calcium phosphate, and transformation to poorly crystalline hydroxylapatite (HAP within one week. The presence of the bacterial cells appeared to delay precipitation, although by the end of the experiments the overall extent of precipitation was similar for all treatments. The stoichiometry of the final precipitates as well as Rietveld structure refinement using x-ray diffraction data indicated that the presence of organic acids and bacterial cells resulted in an increasing a and decreasing c lattice parameter, with the higher concentration of cells resulting in the greatest distortion. Uptake of Sr into the solids was decreased in the treatments with cells and organic acids, compared to the control. Conclusions Our results suggest that the minerals formed initially during an engineered precipitation application for trace element sequestration may not be the ones that control long-term immobilization of the contaminants. In

  4. Magnesium isotope fractionation in bacterial mediated carbonate precipitation experiments

    Science.gov (United States)

    Parkinson, I. J.; Pearce, C. R.; Polacskek, T.; Cockell, C.; Hammond, S. J.

    2012-12-01

    Magnesium is an essential component of life, with pivotal roles in the generation of cellular energy as well as in plant chlorophyll [1]. The bio-geochemical cycling of Mg is associated with mass dependant fractionation (MDF) of the three stable Mg isotopes [1]. The largest MDF of Mg isotopes has been recorded in carbonates, with foraminiferal tests having δ26Mg compositions up to 5 ‰ lighter than modern seawater [2]. Magnesium isotopes may also be fractionated during bacterially mediated carbonate precipitation and such carbonates are known to have formed in both modern and ancient Earth surface environments [3, 4], with cyanobacteria having a dominant role in carbonate formation during the Archean. In this study, we aim to better constrain the extent to which Mg isotope fractionation occurs during cellular processes, and to identify when, and how, this signal is transferred to carbonates. To this end we have undertaken biologically-mediated carbonate precipitation experiments that were performed in artificial seawater, but with the molar Mg/Ca ratio set to 0.6 and with the solution spiked with 0.4% yeast extract. The bacterial strain used was marine isolate Halomonas sp. (gram-negative). Experiments were run in the dark at 21 degree C for two to three months and produced carbonate spheres of various sizes up to 300 μm in diameter, but with the majority have diameters of ~100 μm. Control experiments run in sterile controls (`empty` medium without bacteria) yielded no precipitates, indicating a bacterial control on the precipitation. The carbonate spheres are produced are amenable to SEM, EMP and Mg isotopic analysis by MC-ICP-MS. Our new data will shed light on tracing bacterial signals in carbonates from the geological record. [1] Young & Galy (2004). Rev. Min. Geochem. 55, p197-230. [2] Pogge von Strandmann (2008). Geochem. Geophys. Geosys. 9 DOI:10.1029/2008GC002209. [3] Castanier, et al. (1999). Sed. Geol. 126, 9-23. [4] Cacchio, et al. (2003

  5. Radiation Induced Precipitation in Iron

    International Nuclear Information System (INIS)

    Foils of iron have been neutron-irradiated in the Swedish re- search reactor R2 to integrated doses in the range 1017 - 1019 nvt (> 1 MeV) and examined by transmission electron microscopy. Features have been observed having diffraction contrast similar to that of the prismatic dislocation loops formed in f.c.c. metals by the collapse of point-defect clusters. The features have been shown to be due to precipitation of impurities at radiation damage centres in the iron matrix

  6. Microbiologically Induced Calcite Precipitation Mediated by Sporosarcina pasteurii.

    Science.gov (United States)

    Bhaduri, Swayamdipta; Debnath, Nandini; Mitra, Sushanta; Liu, Yang; Kumar, Aloke

    2016-01-01

    The particular bacterium under investigation here (S. pasteurii) is unique in its ability, under the right conditions, to induce the hydrolysis of urea (ureolysis) in naturally occurring environments through secretion of an enzyme urease. This process of ureolysis, through a chain of chemical reactions, leads to the formation of calcium carbonate precipitates. This is known as Microbiologically Induced Calcite Precipitation (MICP). The proper culture protocols for MICP are detailed here. Finally, visualization experiments under different modes of microscopy were performed to understand various aspects of the precipitation process. Techniques like optical microscopy, Scanning Electron Microscopy (SEM) and X-Ray Photo-electron Spectroscopy (XPS) were employed to chemically characterize the end-product. Further, the ability of these precipitates to clog pores inside a natural porous medium was demonstrated through a qualitative experiment where sponge bars were used to mimic a pore-network with a range of length scales. A sponge bar dipped in the culture medium containing the bacterial cells hardens due to the clogging of its pores resulting from the continuous process of chemical precipitation. This hardened sponge bar exhibits superior strength when compared to a control sponge bar which becomes compressed and squeezed under the action of an applied external load, while the hardened bar is able to support the same weight with little deformation. PMID:27167458

  7. Responses of Soil Bacterial Communities to Nitrogen Deposition and Precipitation Increment Are Closely Linked with Aboveground Community Variation.

    Science.gov (United States)

    Li, Hui; Xu, Zhuwen; Yang, Shan; Li, Xiaobin; Top, Eva M; Wang, Ruzhen; Zhang, Yuge; Cai, Jiangping; Yao, Fei; Han, Xingguo; Jiang, Yong

    2016-05-01

    It has been predicted that precipitation and atmospheric nitrogen (N) deposition will increase in northern China; yet, ecosystem responses to the interactive effects of water and N remain largely unknown. In particular, responses of belowground microbial community to projected global change and their potential linkages to aboveground macro-organisms are rarely studied. In this study, we examined the responses of soil bacterial diversity and community composition to increased precipitation and multi-level N deposition in a temperate steppe in Inner Mongolia, China, and explored the diversity linkages between aboveground and belowground communities. It was observed that N addition caused the significant decrease in bacterial alpha-diversity and dramatic changes in community composition. In addition, we documented strong correlations of alpha- and beta-diversity between plant and bacterial communities in response to N addition. It was found that N enriched the so-called copiotrophic bacteria, but reduced the oligotrophic groups, primarily by increasing the soil inorganic N content and carbon availability and decreasing soil pH. We still highlighted that increased precipitation tended to alleviate the effects of N on bacterial diversity and dampen the plant-microbe connections induced by N. The counteractive effects of N addition and increased precipitation imply that even though the ecosystem diversity and function are predicted to be negatively affected by N deposition in the coming decades; the combination with increased precipitation may partially offset this detrimental effect. PMID:26838999

  8. A bio-chemo-hydro-mechanical model for microbially induced calcite precipitation in soils

    OpenAIRE

    Fauriel, Suzanne; Laloui, Lyesse

    2012-01-01

    Microbial Induced Calcite Precipitation (MICP) is an innovative technique for soil grouting involving a bacterial reactive grout. A comprehensive research work is carried out to better understand and consequently describe the phenomenon of multispecies reactive biogrout transport in saturated, deformable soil. A unique predictive model of behavior of the porous media during biogrout injection taking into account flow, transport, sorption, bacterial decay and chemical reaction, as well as cons...

  9. Influence of acid precipitation on bacterial populations in lakes

    Energy Technology Data Exchange (ETDEWEB)

    Rao, S.S.; Dutka, B.J.

    1983-01-01

    Relative abundance of total, respiring, aerobic heterotrophic, nitrogen cycle and sulfur cycle bacteria was measured in acid stressed and non-acid stressed hardwater lakes. Data indicated that bacterial populations and densities were nearly an order of magnitude less in acid stressed waters than in non-acid stressed waters. Nitrifying bacteria and some sulfur cycle bacteria (Thiobacillus sp.) were very low or absent in acid stressed waters. Surface sediments of acid stressed lakes contained 3 to 4 times more organic matter than the amount found in the relatively more enriched lake. Methodology and data are presented. 20 references, 1 figure, 1 table.

  10. Microbially Induced Calcite Precipitation Employing Environmental Isolates

    OpenAIRE

    Gunjo Kim; Heejung Youn

    2016-01-01

    In this study, five microbes were employed to precipitate calcite in cohesionless soils. Four microbes were selected from calcite-precipitating microbes isolated from calcareous sand and limestone cave soils, with Sporosarcina pasteurii ATCC 11859 (standard strain) used as a control. Urease activities of the four microbes were higher than that of S. pasteurii. The microbes and urea–CaCl2 medium were injected at least four times into cohesionless soils of two different relative densities (60% ...

  11. Microbially Induced Precipitation of Strontianite Nanoparticles.

    Science.gov (United States)

    Kang, Serku; Yumi Kim; Lee, Young Jae; Roh, Yul

    2015-07-01

    The objectives of this study were to investigate the microbially mediated precipitation of strontium by microorganisms, and to examine the mineralogical characteristics of the precipitates. Wu Do-1 (Proteus mirabilis) enriched from rhodoliths was used to precipitate strontium at room temperature under aerobic environment. The growth of Wu Do-1 gradually increased over 16 days (OD600 = 2.6) and then decreased until 22 days (OD600 = 2.0) during microbial incubation for strontium precipitation. Also, the pH decreased from 6.5 to 5.3 over 4 days of incubation due to microbial oxidation of organic acids, and then the pH increased up to 8.6 at 25 days of incubation due to NH3+ generation. The Sr2+ concentration in the biotic group sharply decreased from 2,953 mg/L to 5.7 mg/L over 29 days of incubation. XRD, SEM-/TEM-EDS analyses revealed that the precipitates formed by Wu Do-1 (Proteus mirabilis) were identified as 20-70 nm sized strontianite (SrCO3). Therefore, these results suggested that formation of sparingly soluble Sr precipitates mediated by Wu Do-1 (Proteus mirabilis) sequesters strontium and carbon dioxide into a more stable and less toxic form such as strontianite (SrCO3). These results also suggest that bioremediation of metal-contaminated water and biominealization of carbonate minerals may be feasible in the marine environment. PMID:26373143

  12. Rhinovirus Infection Induces Degradation of Antimicrobial Peptides and Secondary Bacterial Infection in Chronic Obstructive Pulmonary Disease

    OpenAIRE

    Patrick Mallia; Joseph Footitt; Rosa Sotero; Annette Jepson; Marco Contoli; Maria-Belen Trujillo-Torralbo; Tatiana Kebadze; Julia Aniscenko; Gregory Oleszkiewicz; Katrina Gray; Message, Simon D.; Kazuhiro Ito; Barnes, Peter J; Adcock, Ian M.; Alberto Papi

    2012-01-01

    Rationale: Chronic obstructive pulmonary disease (COPD) exacerbations are associated with virus (mostly rhinovirus) and bacterial infections, but it is not known whether rhinovirus infections precipitate secondary bacterial infections.

  13. Parameterization of ionization induced in the atmosphere by precipitating particles

    Science.gov (United States)

    Artamonov, Anton; Usoskin, Ilya; Kovaltsov, Gennady

    We present a physical model to calculate ionization induced in the atmosphere by precipitating particles. This model is based on the Bethe-Bloch equation applied for precipitating particles such as: electrons, alpha-particles and protons. The energy range of precipitating particles is up to 5MeV and 80MeV/nuc respectively. This model provides an easy implementation with a robust realization of model calculations for a wide range of incident energies of precipitating particles. This method is limited to the upper-middle atmosphere. An ionization yield function [see, Usoskin and Kovaltsov, 2006; Usoskin, Kovaltsov, Mironova, 2010] can be also used in this model, making it possible to calculate the atmospheric ionization effect of precipitating particles for the entire atmosphere, dawn to the ground.

  14. Satellite Estimates of Precipitation-Induced Dissipation in the Atmosphere

    Science.gov (United States)

    Pauluis, Olivier; Dias, Juliana

    2012-02-01

    A substantial amount of frictional dissipation in the atmosphere occurs in the microphysical shear zones surrounding falling precipitation. The dissipation rate is computed here from recently available satellite retrieval from the Tropical Rainfall Measurement Missions and is found to average 1.8 watts per square meter between 30°S and 30°N. The geographical distribution of the precipitation-induced dissipation is closely tied to that of precipitation but also reveals a stronger dissipation rate for continental convection than for maritime convection. Because the precipitation-induced dissipation is of the same magnitude as the turbulent dissipation of the kinetic energy in the atmosphere, changes in the hydrological cycle could potentially have a direct impact on the amount of kinetic energy generated and dissipated by the atmospheric circulation.

  15. Irradiation-induced precipitation modelling of ferritic steels

    Science.gov (United States)

    Yin, You Fa; Faulkner, Roy G.; Lu, Zheng

    2009-06-01

    In high strength low alloy (HSLA) steels typically used in reactor pressure vessels (RPV), irradiation-induced microstructure changes affect the performance of the components. One such change is precipitation hardening due to the formation of solute clusters and/or precipitates which form as a result of irradiation-enhanced solute diffusion and thermodynamic stability changes. The other is irradiation-enhanced tempering which is a result of carbide coarsening due to irradiation-enhanced carbon diffusion. Both effects have been studied using a recently developed Monte Carlo based precipitation kinetics simulation technique and modelling results are compared with experimental measurements. Good agreements have been achieved.

  16. Irradiation-induced precipitation modelling of ferritic steels

    Energy Technology Data Exchange (ETDEWEB)

    Yin, Y.F. [Department of Materials, Loughborough University, Ashby Road, Loughborough University, Leicestershire LE11 3TU (United Kingdom)], E-mail: y.yin@lboro.ac.uk; Faulkner, Roy G.; Zheng Lu [Department of Materials, Loughborough University, Ashby Road, Loughborough University, Leicestershire LE11 3TU (United Kingdom)

    2009-05-31

    In high strength low alloy (HSLA) steels typically used in reactor pressure vessels (RPV), irradiation-induced microstructure changes affect the performance of the components. One such change is precipitation hardening due to the formation of solute clusters and/or precipitates which form as a result of irradiation-enhanced solute diffusion and thermodynamic stability changes. The other is irradiation-enhanced tempering which is a result of carbide coarsening due to irradiation-enhanced carbon diffusion. Both effects have been studied using a recently developed Monte Carlo based precipitation kinetics simulation technique and modelling results are compared with experimental measurements. Good agreements have been achieved.

  17. Bacterial Gibberellins Induce Systemic Resistance of Plants

    Directory of Open Access Journals (Sweden)

    I. N. FEKLISTOVA

    2014-06-01

    Full Text Available It is generally agreed today that some rhizosphere bacteria can ensure induced systemic resistance to pathogens. In this paper we tested the ability of gibberellins produced by rhizosphere non-pathogenic bacteria Pseudomonas aurantiaca to induce systemic resistance to alternariosis agent – Alternaria brassicicola – in oilseed rape plants.Oilseed rape (Brássica nápus is one of the most promising oil-bearing croppers. It allows improving the supply of population with vegetable oil, animal and poultry industries with high quality vegetable protein. It is used for biofuel production as well.Gibberellin preparation was isolated from liquid culture of strain Pseudomonas aurantiaca grown in 250 mL of M9 medium (48 h, 28 °C under darkroom conditions. Gibberellins were extracted according procedure described by Tien et al. (1979. Gibberellins concentration in the medium was determined by fluorometric method.Elicitor activity of bacterial metabolites – gibberellins – was analyzed in model system of artificial inoculation of oilseed rape germs with phytopathogenic fungi Alternaria brassicicola. The elicitor action efficiency was evaluated on the 15th day of oilseed rape cultivation based on the percentage of leaf surface covered by necrotic lesions.Gibberellins were shown to induce systemic resistance resulted in decreasing of oil seed plants   vulnerability by 52.7%.It is known that under the unfavorable conditions plants synthesis the reactive oxygen intermediates   which activate destructive processes. One of the first organism reactions to stress action is the change of the lipid peroxidation level. It was shown that treatment of the soil with gibberellins resulted in decreasing of the lipid peroxidation level twofold.Gibberellins were shown to have a similar effect on permeability of cell membranes for free nucleotides. The permeability of cell membranes in leaves decreased 2.8-fold at room temperature. We suggest that gibberellins

  18. Spectral induced polarization signatures of abiotic FeS precipitation

    OpenAIRE

    Ntarlagiannis, Dimitrios; Doherty, Rory; Williams, Kenneth H.

    2010-01-01

    In recent years, geophysical methods have been shown to be sensitive to microbial-induced mineralization processes. The spectral induced-polarization (SIP) method appears to be very promising for monitoring mineralization and microbial processes. With this work, we study the links of mineralization and SIP signals, in the absence of microbial activity. We recorded the SIP response during abiotic FeS precipitation. We show that the SIP signals are diagnostic of FeS mineralization and can be di...

  19. Soil Bacteria Population Dynamics Following Stimulation for Ureolytic Microbial-Induced CaCO3 Precipitation.

    Science.gov (United States)

    Gat, Daniella; Ronen, Zeev; Tsesarsky, Michael

    2016-01-19

    Microbial-induced CaCO3 precipitation (MICP) via urea-hydrolysis (ureolysis) is an emerging soil improvement technique for various civil engineering and environmental applications. In-situ application of MICP in soils is performed either by augmenting the site with ureolytic bacteria or by stimulating indigenous ureolytic bacteria. Both of these approaches may lead to changes in the indigenous bacterial population composition and to the accumulation of large quantities of ammonium. In this batch study, effective ureolysis was stimulated in coastal sand from a semiarid environment, with low initial ureolytic bacteria abundance. Two different carbon sources were used: yeast-extract and molasses. No ureolysis was observed in their absence. Ureolysis was achieved using both carbon sources, with a higher rate in the yeast-extract enrichment resulting from increased bacterial growth. The changes to the indigenous bacterial population following biostimulation of ureolysis were significant: Bacilli class abundancy increased from 5% in the native sand up to 99% in the yeast-extract treatment. The sand was also enriched with ammonium-chloride, where ammonia-oxidation was observed after 27 days, but was not reflected in the bacterial population composition. These results suggest that biostimulation of ureolytic bacteria can be applied even in a semiarid and nutrient-poor environment using a simple carbon source, that is, molasses. The significant changes to bacterial population composition following ureolysis stimulation could result in a decrease in trophic activity and diversity in the treated site, thus they require further attention. PMID:26689904

  20. Synchrotron X-ray induced solution precipitation of nanoparticles

    CERN Document Server

    Lee, H J; Hwu, Y; Tsai, W L

    2003-01-01

    By irradiating a solution in electroless Ni deposition using synchrotron X-rays, Ni composite was found to nucleate homogeneously and eventually precipitate in the form of nanoparticles. The size of the nanoparticles precipitated is rather uniform (100-300 nm depending on the applied temperature). By the addition of an organic acid, well-dispersed nanoparticles could be effectively deposited on glass substrate. The hydrated electrons (e sub a sub q sup -), products of radiolysis of water molecules by synchrotron X-rays, may be responsible for the effective reduction of the metal ions, resulting in homogeneous nucleation and nanoparticle formation. Our results suggest that synchrotron X-ray can be used to induce solution precipitation of nanoparticles and therefore lead to a new method of producing nanostructured particles and coating.

  1. Spectral induced polarization signatures of abiotic FeS precipitation

    Energy Technology Data Exchange (ETDEWEB)

    Ntarlagiannis, D.; Doherty, R.; Williams, K. H.

    2010-01-15

    In recent years, geophysical methods have been shown to be sensitive to microbial induced mineralization processes. The spectral induced polarization (SIP) method appears to be very promising for monitoring mineralization and microbial processes. With this work, we study the links of mineralization and SIP signals, in the absence of microbial activity. We recorded the SIP response during abiotic FeS precipitation. We show that the SIP signals are diagnostic of FeS mineralization and can be differentiated from SIP signals from bio-mineralization processes. More specifically the imaginary conductivity shows almost linear dependence on the amount of FeS precipitating out of solution, above the threshold value 0.006 gr under our experimental conditions. This research has direct implications for the use of the SIP method as a monitoring, and decision making, tool for sustainable remediation of metals in contaminated soils and groundwater.

  2. Optical Signatures of Lightning-induced Electron Precipitation (Invited)

    Science.gov (United States)

    Marshall, R. A.; Bortnik, J.; Lehtinen, N. G.

    2010-12-01

    The electromagnetic pulse (EMP) from an intense lightning discharge propagates primarily in the waveguide formed between the Earth and the ionosphere, but a fraction of its energy leaks through the ionosphere and propagates as whistler-mode waves in the inner magnetosphere. In the equatorial region, these whistlers cause pitch-angle and energy scattering of trapped energetic electrons, which may be scattered into the loss cone. On their subsequent bounce, these electrons will precipitate in the upper atmosphere, causing new ionization and optical emissions. The resulting ionization increase has been measured for decades as lightning-induced electron precipitation (LEP) events, but the optical signature has never been studied. We present model calculations to predict the intensity of these optical emissions in a number of bands and lines, including the 5577 Å and 6300 Å lines of Oxygen, and the N2 1P and N2+ 1N band systems of Nitrogen. This modeling effort involves a four-step procedure: first, the lightning impulse is ray-traced through the ionosphere and magnetosphere, and calculations of the wave-particle interaction in the equatorial region result in estimates of the precipitated flux of electrons. Next, a Monte Carlo simulation of this flux is used to determine altitude profiles of deposited energy. Third, this deposited energy is converted to altitude profiles of ionization and optical emissions; and finally, line-of-sight integration to ground- or space-based observers yields estimates of observable brightness. We find that the predicted emissions may reach as high as ~50 R in the green 5577 Å line for a 100 kA cloud-to-ground discharge, and should be observable with photometric instruments. We compare these results to those of VLF transmitter-induced precipitation, which is orders of magnitude weaker, but has the advantage of being a controllable experiment. We further investigate the effect of latitude, lightning peak current, and radiation belt and

  3. Biofilm-induced calcium carbonate precipitation: application in the subsurface

    Science.gov (United States)

    Phillips, A. J.; Eldring, J.; Lauchnor, E.; Hiebert, R.; Gerlach, R.; Mitchell, A. C.; Esposito, R.; Cunningham, A. B.; Spangler, L.

    2012-12-01

    We have investigated mitigation strategies for sealing high permeability regions, like fractures, in the subsurface. This technology has the potential to, for example, improve the long-term security of geologically-stored carbon dioxide (CO2) by sealing fractures in cap rocks or to mitigate leakage pathways to prevent contamination of overlying aquifers from hydraulic fracturing fluids. Sealing technologies using low-viscosity fluids are advantageous since they potentially reduce the necessary injection pressures and increase the radius of influence around injection wells. In this technology, aqueous solutions and suspensions are used to promote microbially-induced mineral precipitation which can be applied in subsurface environments. To this end, a strategy was developed to twice seal a hydraulically fractured, 74 cm (2.4') diameter Boyles Sandstone core, collected in North-Central Alabama, with biofilm-induced calcium carbonate (CaCO3) precipitates under ambient pressures. Sporosarcina pasteurii biofilms were established and calcium and urea containing reagents were injected to promote saturation conditions favorable for CaCO3 precipitation followed by growth reagents to resuscitate the biofilm's ureolytic activity. Then, in order to evaluate this process at relevant deep subsurface pressures, a novel high pressure test vessel was developed to house the 74 cm diameter core under pressures as high as 96 bar (1,400 psi). After determining that no impact to the fracture permeability occurred due to increasing overburden pressure, the fractured core was sealed under subsurface relevant pressures relating to 457 meters (1,500 feet) below ground surface (44 bar (650 psi) overburden pressure). After fracture sealing under both ambient and subsurface relevant pressure conditions, the sandstone core withstood three times higher well bore pressure than during the initial fracturing event, which occurred prior to biofilm-induced CaCO3 mineralization. These studies suggest

  4. A field and modeling study of fractured rock permeability reduction using microbially induced calcite precipitation.

    Science.gov (United States)

    Cuthbert, Mark O; McMillan, Lindsay A; Handley-Sidhu, Stephanie; Riley, Michael S; Tobler, Dominique J; Phoenix, Vernon R

    2013-01-01

    Microbially induced calcite precipitation (MICP) offers an attractive alternative to traditional grouting technologies for creating barriers to groundwater flow and containing subsurface contamination, but has only thus far been successfully demonstrated at the laboratory scale and predominantly in porous media. We present results of the first field experiments applying MICP to reduce fractured rock permeability in the subsurface. Initially, the ureolytic bacterium, Sporosarcina pasteurii, was fixed in the fractured rock. Subsequent injection of cementing fluid comprising calcium chloride and urea resulted in precipitation of large quantities (approximately 750 g) of calcite; significant reduction in the transmissivity of a single fracture over an area of several m(2) was achieved in around 17 h of treatment. A novel numerical model is also presented which simulates the field data well by coupling flow and bacterial and solute reactive transport processes including feedback due to aperture reduction via calcite precipitation. The results show that MICP can be successfully manipulated under field conditions to reduce the permeability of fractured rock and suggest that an MICP-based technique, informed by numerical models, may form the basis of viable solutions to aid pollution mitigation. PMID:24147737

  5. Investigation of NWC-induced electron precipitation and theoretical simulation

    CERN Document Server

    Zhang, Zhenxia; Wang, Chenyu; Chen, Lunjin

    2016-01-01

    Enhancement of the electron fluxes in the inner radiation belt, which is induced by the powerful North West Cape (NWC) very-low-frequency (VLF) transmitter, have been observed and analyzed by several research groups. However, all of the previous publications have focused on NWC-induced >100-keV electrons only, based on observations from the Detection of Electro-Magnetic Emissions Transmitted from Earthquake Regions (DEMETER) and the Geostationary Operational Environmental Satellite (GOES) satellites. Here, we present flux enhancements with 30--100-keV electrons related to NWC transmitter for the first time, which were observed by the GOES satellite at night. Similar to the 100--300-keV precipitated-electron havior, the low energy 30--100-keV electron precipitation is primarily located east of the transmitter. However, the latter does not drift eastward to the same extent as the former, possibly because of the lower electron velocity. The 30--100-keV electrons are distributed in the L=1.8--2.1 shell range, in ...

  6. Virus-induced secondary bacterial infection: a concise review

    Science.gov (United States)

    Hendaus, Mohamed A; Jomha, Fatima A; Alhammadi, Ahmed H

    2015-01-01

    Respiratory diseases are a very common source of morbidity and mortality among children. Health care providers often face a dilemma when encountering a febrile infant or child with respiratory tract infection. The reason expressed by many clinicians is the trouble to confirm whether the fever is caused by a virus or a bacterium. The aim of this review is to update the current evidence on the virus-induced bacterial infection. We present several clinical as well in vitro studies that support the correlation between virus and secondary bacterial infections. In addition, we discuss the pathophysiology and prevention modes of the virus–bacterium coexistence. A search of the PubMed and MEDLINE databases was carried out for published articles covering bacterial infections associated with respiratory viruses. This review should provide clinicians with a comprehensive idea of the range of bacterial and viral coinfections or secondary infections that could present with viral respiratory illness. PMID:26345407

  7. Bacterial Gibberellins Induce Systemic Resistance of Plants

    OpenAIRE

    I. N. FEKLISTOVA; I. A. GRINEVA; T. L. SKAKUN; L. E. SADOVSKAYA

    2014-01-01

    It is generally agreed today that some rhizosphere bacteria can ensure induced systemic resistance to pathogens. In this paper we tested the ability of gibberellins produced by rhizosphere non-pathogenic bacteria Pseudomonas aurantiaca to induce systemic resistance to alternariosis agent – Alternaria brassicicola – in oilseed rape plants.Oilseed rape (Brássica nápus) is one of the most promising oil-bearing croppers. It allows improving the supply of population with vegetable oil, animal and ...

  8. Strain-induced precipitation in a Ti micro-alloyed HSLA steel

    International Nuclear Information System (INIS)

    Highlights: → Strain induces TiC precipitation in austenite. → TiC precipitation occurs on dislocations and dislocation sub-structures. → Severe deformation brings out more dislocations in steel. → Higher dislocation density results in faster kinetics of precipitation. - Abstract: The strain-induced precipitation kinetics of TiC in a 0.05% C-0.10% Ti HSLA steel was investigated by two-stage interrupted compression method. The precipitation-time-temperature (PTT) diagram for TiC precipitation was obtained by analyzing the softening kinetics curves of deformed austenite, which was confirmed to be of validity by employing transmission electron microscopy (TEM). Experimental results showed that the PTT diagram for TiC precipitation exhibited a typical 'C' shaped and the nucleation of strain-induced TiC precipitation was a very rapid process in the temperature range 900-925 deg. C. The relatively severe deformation applied on the steel was considered to be the main factor resulting in the fast kinetics of TiC precipitation. The TiC precipitates were heterogeneously distributed in either a chain-like or a cell like manner, implying that the precipitates nucleated on dislocations or on dislocation sub-structures, which were produced by deformation. The growth of TiC precipitates approximately followed a parabolic law. In addition, the coarsening of strain-induced TiC precipitates had already started before the completion of precipitation.

  9. Strain-induced precipitation in a Ti micro-alloyed HSLA steel

    Energy Technology Data Exchange (ETDEWEB)

    Wang Zhenqiang, E-mail: wangzhe19840203@163.com [Key Laboratory of Advanced Materials, Department of Materials Science and Engineering, Tsinghua University, Haidian District, Beijing 100084 (China) and Institute for Structural Materials, Central Iron and Steel Research Institute, No. 76, Xueyuan Nanlu, Beijing 100081 (China); Mao Xinping [Guangzhou Zhujiang Steel Co. Ltd, Guangzhou 510730 (China); Yang Zhigang [Key Laboratory of Advanced Materials, Department of Materials Science and Engineering, Tsinghua University, Haidian District, Beijing 100084 (China); Sun Xinjun; Yong Qilong [Institute for Structural Materials, Central Iron and Steel Research Institute, No. 76, Xueyuan Nanlu, Beijing 100081 (China); Li Zhaodong [Key Laboratory of Advanced Materials, Department of Materials Science and Engineering, Tsinghua University, Haidian District, Beijing 100084 (China); Institute for Structural Materials, Central Iron and Steel Research Institute, No. 76, Xueyuan Nanlu, Beijing 100081 (China); Weng Yuqing [Chinese Society for Metals, No. 46, Dongsixi Street, Beijing 100371 (China)

    2011-11-25

    Highlights: {yields} Strain induces TiC precipitation in austenite. {yields} TiC precipitation occurs on dislocations and dislocation sub-structures. {yields} Severe deformation brings out more dislocations in steel. {yields} Higher dislocation density results in faster kinetics of precipitation. - Abstract: The strain-induced precipitation kinetics of TiC in a 0.05% C-0.10% Ti HSLA steel was investigated by two-stage interrupted compression method. The precipitation-time-temperature (PTT) diagram for TiC precipitation was obtained by analyzing the softening kinetics curves of deformed austenite, which was confirmed to be of validity by employing transmission electron microscopy (TEM). Experimental results showed that the PTT diagram for TiC precipitation exhibited a typical 'C' shaped and the nucleation of strain-induced TiC precipitation was a very rapid process in the temperature range 900-925 deg. C. The relatively severe deformation applied on the steel was considered to be the main factor resulting in the fast kinetics of TiC precipitation. The TiC precipitates were heterogeneously distributed in either a chain-like or a cell like manner, implying that the precipitates nucleated on dislocations or on dislocation sub-structures, which were produced by deformation. The growth of TiC precipitates approximately followed a parabolic law. In addition, the coarsening of strain-induced TiC precipitates had already started before the completion of precipitation.

  10. Histone modifications induced by a family of bacterial toxins

    OpenAIRE

    Hamon, Mélanie Anne; Batsché, Eric; Régnault, Béatrice; Tham, To Nam; Seveau, Stéphanie; Muchardt, Christian; Cossart, Pascale

    2007-01-01

    Upon infection, pathogens reprogram host gene expression. In eukaryotic cells, genetic reprogramming is induced by the concerted activation/repression of transcription factors and various histone modifications that control DNA accessibility in chromatin. We report here that the bacterial pathogen Listeria monocytogenes induces a dramatic dephosphorylation of histone H3 as well as a deacetylation of histone H4 during early phases of infection. This effect is mediated by the major listerial tox...

  11. Effects of bacterially produced precipitates on the metabolism of sulfate reducing bacteria during the bio-treatment process of copper-containing wastewater

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    A large volume of bacterially produced precipitates are generated during the bio-treatment of heavy metal wastewater.The composition of the bacterially produced precipitates and its effects on sulfate reducing bacteria (SRB) in copper-containing waste stream were evaluated in this study.The elemental composition of the microbial precipitate was studied using electrodispersive X-ray spectroscopy (EDX),and it was found that the ratio of S:Cu was 1.12.Combining with the results of copper distribution in the SRB metabolism culture,which was analyzed by the sequential extraction procedure,copper in the precipitates was determined as covellite (CuS).The bacterially produced precipitates caused a decrease of the sulfate reduction rate,and the more precipitates were generated,the lower the sulfate reduction rate was.The particle sizes of bacterially generated covellite were ranging from 0.03 to 2 m by particles size distribution (PSD) analysis,which was smaller than that of the SRB cells.Transmission electron microscopy (TEM) analysis showed that the microbial covellite was deposited on the surface of the cell.The effects of the microbial precipitate on SRB metabolism were found to be weakened by increasing the precipitation time and adding microbial polymeric substances in later experiments.These results provided direct evidence that the SRB activity was inhibited by the bacterially produced covellite,which enveloped the bacterium and thus affected the metabolism of SRB on mass transfer.

  12. Effect of Mg/Ca ratios on microbially induced carbonate precipitation

    Science.gov (United States)

    Balci, Nurgul; Demirel, Cansu; Seref Sonmez, M.; Kurt, M. Ali

    2016-04-01

    Influence of Mg/Ca ratios on microbially induced carbonate mineralogy were investigated by series of experiments carried out under various environmental conditions (Mg/Ca ratio, temperature and salinity). Halophilic bacterial cultures used for biomineralization experiments were isolated from hypersaline Lake Acıgöl (Denizli, SW Turkey), displaying extreme water chemistry with an average pH around 8.6 (Balci eta l.,2015). Enriched bacterial culture used in the experiments consisted of Halomonas saccharevitans strain AJ275, Halomonas alimentaria strain L7B; Idiomarina sp. TBZ29, 98% Idiomarina seosensis strain CL-SP19. Biomineralization experiments were set up using above enriched culture with Mg/Ca ratios of 0.05, 1, 4 and 15 and salinity of 8% and 15% experiments at 30oC and 10oC. Additionally, long-term biomineralization experiments were set up to last for a year, for Mg/Ca=4 and Mg/Ca=15 experiments at 30oC. For each experimental condition abiotic experiments were also conducted. Solution chemistry throughout incubation was monitored for Na, K, Mg, Ca, bicarbonate, carbonate, ammonium and phosphate for a month. At the end of the experiments, precipitates were collected and morphology and mineralogy of the biominerals were investigated and results were evaluated using the software DIFFRAC.SUITE EVA. Overall the preliminary results showed chemical precipitation of calcite, halite, hydromagnesite and sylvite. Results obtained from biological experiments indicate that, low Mg/Ca ratios (0.05 and 1) favor chlorapatite precipitation, whereas higher Mg/Ca ratios favor struvite precipitation. Biomineralization of dolomite, huntite and magnesite is favorable at high Mg/Ca ratios (4 and 15), in the presence of halophilic bacteria. Moreover, results indicate that supersaturation with respect to Mg (Mg/Ca=15) combined with NaCl (15%) inhibits biomineralization and forms chemical precipitates. 15% salinity is shown to favor chemical precipitation of mineral phases more than

  13. Characterization of Strain-Induced Precipitation in Inconel 718 Superalloy

    Science.gov (United States)

    Calvo, Jessica; Penalva, Mariluz; Cabrera, José María

    2016-06-01

    Inconel 718 presents excellent mechanical properties at high temperatures, as well as good corrosion resistance and weldability. These properties, oriented to satisfy the design requirements of gas turbine components, depend on microstructural features such as grain size and precipitation. In this work, precipitation-temperature-time diagrams have been derived based on a stress relaxation technique and the characterization of precipitates by scanning electron microscopy. By using this methodology, the effect of strain accumulation during processing on the precipitation kinetics can be determined. The results show that the characteristics of precipitation are significantly modified when plastic deformation is applied, and the kinetics are slightly affected by the amount of total plastic deformation.

  14. Role of peach proteins in juice precipitation induced by high pressure CO2.

    Science.gov (United States)

    Zhao, Feng; Zhou, Linyan; Wang, Yongtao; Liao, Xiaojun

    2016-10-15

    To better understand the role of peach proteins in juice precipitation induced by high pressure CO2 (HPCD), proteins extracted from peach juice were subjected to HPCD and heat, and changes in particle size distribution (PSD) and structure were investigated. PSD analysis showed aggregations of proteins were both induced by HPCD and heat, but HPCD induced a stronger aggregation. The endotherm of HPCD- and heat-treated proteins moved to lower temperature, indicating that higher-order structures were altered after treatments. Furthermore, proteins related to HPCD- and heat-induced precipitation were analyzed by proteomics and bioinformatics. It was found that proteins with low content of α-helix and hydrogen bonds were more inclined to precipitate under HPCD, and HPCD precipitated proteins with more compact structures than heat, which might cause the stronger aggregation of proteins by HPCD. In conclusion, HPCD could induce the aggregation of peach proteins by destroying higher-order structures, which contributes to juice precipitation. PMID:27173537

  15. Virus-induced secondary bacterial infection: a concise review

    Directory of Open Access Journals (Sweden)

    Hendaus MA

    2015-08-01

    Full Text Available Mohamed A Hendaus,1 Fatima A Jomha,2 Ahmed H Alhammadi3 1Department of Pediatrics, Academic General Pediatrics Division, Weill-Cornell Medical College, Hamad Medical Corporation, Doha, Qatar; 2School of Pharmacy, Lebanese International University, Khiara, Lebanon; 3Department of Pediatrics, Academic General Pediatrics Division, Weill-Cornell Medical College, Hamad Medical Corporation, Doha, Qatar Abstract: Respiratory diseases are a very common source of morbidity and mortality among children. Health care providers often face a dilemma when encountering a febrile infant or child with respiratory tract infection. The reason expressed by many clinicians is the trouble to confirm whether the fever is caused by a virus or a bacterium. The aim of this review is to update the current evidence on the virus-induced bacterial infection. We present several clinical as well in vitro studies that support the correlation between virus and secondary bacterial infections. In addition, we discuss the pathophysiology and prevention modes of the virus–bacterium coexistence. A search of the PubMed and MEDLINE databases was carried out for published articles covering bacterial infections associated with respiratory viruses. This review should provide clinicians with a comprehensive idea of the range of bacterial and viral coinfections or secondary infections that could present with viral respiratory illness. Keywords: bacteria, infection, risk, virus

  16. Effects of bentonite and yeast extract as nutrient on decrease in hydraulic conductivity of porous media due to CaCO3 precipitation induced by Sporosarcina pasteurii.

    Science.gov (United States)

    Eryürük, Kağan; Yang, Suyin; Suzuki, Daisuke; Sakaguchi, Iwao; Katayama, Arata

    2015-10-01

    The reduction mechanism of hydraulic conductivity was investigated in porous media treated with bentonite and CaCO3 precipitates induced by growing cells of Sporosarcina pasteurii (ATCC 11859). Bentonite, the bacterial cells, and a precipitation solution, composing of 0.5 M CaCl2 and 0.5 M urea with or without 2% weight/volume yeast extract allowing the bacterial growth were sequentially introduced into the continuous-flow columns containing glass beads between 0.05 and 3 mm in diameter. The treatments reduced the hydraulic conductivity of the columns from between 8.4 × 10(-1) and 4.1 × 10(-3) cm/s to between 9.9 × 10(-4) and 2.1 × 10(-6) cm/s as the lowest. With yeast extract, the conductivity continuously decreased during four days of the experiment, while became stable after two days without yeast extract. Introduction of the bacterial cells did not decrease the conductivity. The reduction in hydraulic conductivity was inversely correlated with the volume occupied by the depositions of bentonite and CaCO3 precipitates in column, showing the same efficiency but a larger effect of the CaCO3 precipitates with increasing volume by bacterial growth. The smaller glass beads resulted in larger volume of the depositions. Bentonite increased the deposition of CaCO3 precipitates. Analysis using the Kozeny-Carman equation suggested that without yeast extract, bentonite and the CaCO3 precipitates formed aggregates with glass beads, thus increasing their diameter and consequently decreasing the pore size in the column. With yeast extract, in addition to the aggregates, the individual CaCO3 precipitates formed separately from the aggregates reduced the hydraulic conductivity. PMID:25736267

  17. Irradiation-induced precipitation in Ni--Si alloys

    International Nuclear Information System (INIS)

    The microstructures of Ni+ ion-irradiated Ni--Si solid-solution alloys, containing 2, 4, 6 and 8 at. percent Si were investigated as a function of dose, dose-rate, and temperature. Results of transmission electron microscopy and other data show the precipitation of γ' (Ni3Si) in all samples irradiated at 5000C. Characteristics of the precipitates are described and a mechanism for their formation is suggested. (U.S.)

  18. Colloidal precipitates related to Acid Mine Drainage: bacterial diversity and micro fungi-heavy metal interactions

    Science.gov (United States)

    Lucchetti, G.; Carbone, C.; Consani, S.; Zotti, M.; Di Piazza, S.; Pozzolini, M.; Giovine, M.

    2015-12-01

    In Acid Mine Drainage (AMD) settings colloidal precipitates control the mobility of Potential Toxic Elements (PTEs). Mineral-contaminant relationships (i.e. adsorption, ion-exchange, desorption) are rarely pure abiotic processes. Microbes, mainly bacteria and microfungi, can catalyze several reactions modifying the element speciation, as well as the bioavailability of inorganic pollutants. Soil, sediments, and waters heavily polluted with PTEs through AMD processes are a potential reservoir of extremophile bacteria and fungi exploitable for biotechnological purposes. Two different AMD related colloids, an ochraceous precipitate (deposited in weakly acidic conditions, composed by nanocrystalline goethite) and a greenish-blue precipitate (deposited at near-neutral pH, composed by allophane + woodwardite) were sampled. The aims of this work were to a) characterize the mycobiota present in these colloidal minerals by evaluating the presence of alive fungal propagules and extracting bacteria DNA; b) verify the fungal strains tolerance, and bioaccumulation capability on greenish-blue and ZnSO4 enriched media; c) evaluate potential impact of bacteria in the system geochemistry. The preliminary results show an interesting and selected mycobiota able to survive under unfavourable environmental conditions. A significant number of fungal strains were isolated in pure culture. Among them, species belonging to Penicillium and Trichoderma genera were tested on both greenish-blue and ZnSO4 enriched media. The results show a significant tolerance and bioaccumulation capability to some PTEs. The same colloidal precipitates were processed to extract bacteria DNA by using a specific procedure developed for sediments. The results give a good yield of nucleic acids and a positive PCR amplification of 16S rDNA accomplished the first step for future metagenomic analyses.

  19. Hydrogen isotopic composition of bacterial tetraether membrane lipids as recorder of precipitation dynamics

    Science.gov (United States)

    Peterse, F.; Ernst, N.; Eglinton, T. I.

    2012-12-01

    Recent research has shown that the distribution of branched glycerol dialkyl glycerol tetraethers (brGDGTs), membrane lipids of soil bacteria ubiquitously present in soils worldwide, reflects the climatic conditions of the source organism's living environment. Hence, their distribution in sedimentary archives can be, and has been used to reconstruct past changes in continental air temperature. Over the past decade, compound-specific hydrogen isotope analysis (δD) of lipid biomarkers has been implemented as a method to track changes in the hydrological cycle. Since the hydrogen isotopic composition of a biomarker is related to the moisture source of its precursor organism, the δD-value of brGDGTs may reflect the hydroclimate experienced by soil microorganisms. In this study, we determine the distribution and hydrogen isotopic composition of brGDGTs in soils along an altitudinal gradient from the Cherrapunji plateau in Northeast India, known as 'the wettest place on earth', to test if brGDGTs, besides temperature, also record the precipitation signal of their living environment, and thus their suitability as proxy for past precipitation dynamics. Based on the 'amount' and 'altitude effects' on the precipitation δD in this monsoon area, the brGDGTs are expected to be δD-depleted on top of the plateau relative to in the valley. However, to render the brGDGTs amendable for gas chromatographic separation and determination of their isotopic composition, their ether bonds are generally cleaved with HI, during which the possibility of hydrogen exchange occurs, influencing the δD-value of the brGDGT-derived hydrocarbons. The Cherrapunji transect provides an excellent setting to test the occurrence and potential consequences of hydrogen exchange. The distribution of brGDGTs along the 1800m long altitude transect reflects the adiabatic cooling of air with altitude, indicating active membrane adaptation to environmental changes. Furthermore, comparison of brGDGT-δD with

  20. Effect of strain-induced precipitation on dynamic recrystallization in Mg–Al–Sn alloys

    Energy Technology Data Exchange (ETDEWEB)

    Kabir, Abu Syed Humaun, E-mail: abu.kabir@mail.mcgill.ca; Sanjari, Mehdi; Su, Jing; Jung, In-Ho; Yue, Stephen

    2014-10-20

    Two different amounts of tin (Sn) were added to a Mg–3 wt% Al binary alloy to form different amounts of precipitates during hot deformation. The thermodynamic modeling software, FactSage{sup ™}, was used to calculate the amounts of Sn to generate the desired relative levels of precipitation. The alloys were deformed at four different temperatures and three different strain rates to generate different amounts of precipitates. The objective was to study the effect of these precipitates on dynamic recrystallization. The results indicated that the formation of strain-induced precipitates is a function of deformation temperature, strain, and strain rate. The findings also revealed that higher amounts of precipitates reduced the volume fraction of dynamic recrystallization and refined the dynamically recrystallized grain size.

  1. Analytical model of radiation-induced precipitation at the surface of dilute binary alloy

    International Nuclear Information System (INIS)

    Growth of precipitate layer at the foil surface of an undersaturated binary alloy under uniform irradiation is treated analytically. Analytical expressions for the layer growth rate, layer thickness limit and final component concentrations in the matrix are derived for coherent and incoherent precipitate-matrix interfaces. It is shown that the high temperature limit of radiation-induced precipitation is the same for both types of interfaces, whereas layer thickness limits are different. A parabolic law of the layer growth predicted for both types of interfaces is in agreement with experimental data on γ'-phase precipitation at the surface of Ni-Si dilute alloys under ion irradiation. Effect of sputtering on the precipitation rate and on the low temperature limit of precipitation under ion irradiation is discussed

  2. Structural changes in precipitated silica induced by external forces

    OpenAIRE

    Schneider, G. J.; Göritz, D.

    2011-01-01

    The morphology of pure precipitated silica, silica filled in polydimethylsiloxane rubber, and silica filled in styrene butadiene rubber was studied by means of small-angle X-ray scattering experiments. The silica at a length scale of a few nanometers consists of primary particles, which form aggregates, and clusters with aggregates as basic units. It is evidenced that the aggregate branching, represented by the mass fractal dimension, and the aggregate diameter are different if pure silica an...

  3. Bacterial Outer Membrane Vesicles Induce Plant Immune Responses.

    Science.gov (United States)

    Bahar, Ofir; Mordukhovich, Gideon; Luu, Dee Dee; Schwessinger, Benjamin; Daudi, Arsalan; Jehle, Anna Kristina; Felix, Georg; Ronald, Pamela C

    2016-05-01

    Gram-negative bacteria continuously pinch off portions of their outer membrane, releasing membrane vesicles. These outer membrane vesicles (OMVs) are involved in multiple processes including cell-to-cell communication, biofilm formation, stress tolerance, horizontal gene transfer, and virulence. OMVs are also known modulators of the mammalian immune response. Despite the well-documented role of OMVs in mammalian-bacterial communication, their interaction with plants is not well studied. To examine whether OMVs of plant pathogens modulate the plant immune response, we purified OMVs from four different plant pathogens and used them to treat Arabidopsis thaliana. OMVs rapidly induced a reactive oxygen species burst, medium alkalinization, and defense gene expression in A. thaliana leaf discs, cell cultures, and seedlings, respectively. Western blot analysis revealed that EF-Tu is present in OMVs and that it serves as an elicitor of the plant immune response in this form. Our results further show that the immune coreceptors BAK1 and SOBIR1 mediate OMV perception and response. Taken together, our results demonstrate that plants can detect and respond to OMV-associated molecules by activation of their immune system, revealing a new facet of plant-bacterial interactions. PMID:26926999

  4. Noise-Induced Increase of Sensitivity in Bacterial Chemotaxis.

    Science.gov (United States)

    He, Rui; Zhang, Rongjing; Yuan, Junhua

    2016-07-26

    Flagellated bacteria, like Escherichia coli, can swim toward beneficial environments by modulating the rotational direction of their flagellar motors through a chemotaxis signal transduction network. The noise of this network, the random fluctuation of the intracellular concentration of the signal protein CheY-P with time, has been identified in studies of single cell behavioral variability, and found to be important in coordination of multiple motors in a bacterium and in enhancement of bacterial drift velocity in chemical gradients. Here, by comparing the behavioral difference between motors of wild-type E. coli and mutants without signal noise, we measured the magnitude of this noise in wild-type cells, and found that the noise increases the sensitivity of the bacterial chemotaxis network downstream at the level of the flagellar motor. This provided a simple mechanism for the noise-induced enhancement of chemotactic drift, which we confirmed by simulating the E. coli chemotactic motion in various spatial profiles of chemo-attractant concentration. PMID:27463144

  5. Study of Bacterial Samples Using Laser Induced Breakdown Spectroscopy

    Science.gov (United States)

    W, A. Farooq; M, Atif; W, Tawfik; M, S. Alsalhi; Z, A. Alahmed; M, Sarfraz; J, P. Singh

    2014-12-01

    Laser-induced breakdown spectroscopy (LIBS) technique has been applied to investigate two different types of bacteria, Escherichia coli (B1) and Micrococcus luteus (B2) deposited on glass slides using Spectrolaser 7000. LIBS spectra were analyzed using spectrolaser software. LIBS spectrum of glass substrate was compared with bacteria spectra. Ca, Mg, Na, K, P, S, Cl, Fe, Al, Mn, Cu, C, H and CN-band appeared in bacterial samples in air. Two carbon lines at 193.02 nm, 247.88 nm and one hydrogen line at 656.28 nm with intensity ratios of 1.9, 1.83 and 1.53 appeared in bacterial samples B1 and B2 respectively. Carbon and hydrogen are the important components of the bio-samples like bacteria and other cancer cells. Investigation on LIBS spectra of the samples in He and Ar atmospheres is also presented. Ni lines appeared only in B2 sample in Ar atmosphere. From the present experimental results we are able to show that LIBS technique has a potential in the identification and discrimination of different types of bacteria.

  6. Strain-induced Precipitation in Ti Micro-alloyed Interstitial-free Steel

    Institute of Scientific and Technical Information of China (English)

    Ya-jun HUI; Yang YU; Lin WANG; Chang WANG; Wen-yuan LI; Bin CHEN

    2016-01-01

    Stress relaxation method was carried out on a Ti micro-alloyed interstitial-free (IF)steel at the tempera-ture ranging from 800 to 1 000 ℃.The results show that the softening kinetics curves of deformed austenite can be divided into three stages.At the first stage,the stress has a sharp drop due to the onset of recrystallization.At the second stage,a plateau appears on the relaxation curves indicating the start and finish of strain-induced precipitation. At the third stage,the stress curves begin to descend again because of coarsening of precipitates.Precipitation-time-temperature (PTT)diagram exhibited a “C”shape,and the nose point of the PTT diagram is located at 900 ℃ and the start precipitation time of 10 s.The theoretical calculation shows that the strain-induced precipitates were con-firmed as almost pure TiC particles.The TiC precipitates were heterogeneously distributed in either a chain-like or cell-like manner observed by transmission electron microscopy (TEM),which indicates the precipitates nucleated on dislocations or dislocation substructures.In addition,a thermodynamic analytical model was presented to describe the precipitation in Ti micro-alloyed IF steel,which shows a good agreement between the experimental observation and the predictions of the model.

  7. Deuterium ion irradiation induced precipitation in Fe–Cr alloy: Characterization and effects on irradiation behavior

    International Nuclear Information System (INIS)

    Highlights: • A new phase precipitated in Fe–Cr alloy after deuterium ion irradiation at 773 K. • B2 structure was proposed for the Cr-rich new phase. • Strain fields around the precipitate have been measured by GPA. • The precipitate decrease growth rate of dislocation loop under electron irradiation. - Abstract: A new phase was found to precipitate in a Fe–Cr model alloy after 58 keV deuterium ion irradiation at 773 K. The nanoscale radiation-induced precipitate was studied systematically using high resolution transmission electron microscopy (HRTEM), image simulation and in-situ ultrahigh voltage transmission electron microscopy (HVEM). B2 structure is proposed for the new Cr-rich phase, which adopts a cube-on-cube orientation relationship with regard to the Fe matrix. Geometric phase analysis (GPA) was employed to measure the strain fields around the precipitate and this was used to explain its characteristic 1-dimensional elongation along the 〈1 0 0〉 Fe direction. The precipitate was stable under subsequent electron irradiation at different temperatures. We suggest that the precipitate with a high interface-to-volume ratio enhances the radiation resistance of the material. The reason for this is the presence of a large number of interfaces between the precipitate and the matrix, which may greatly reduce the concentration of point defects around the dislocation loops. This leads to a significant decrease in the growth rate

  8. Oxidation induced precipitation in Al implanted epitaxial silicon

    Science.gov (United States)

    La Ferla, A.; Galvagno, G.; Giri, P. K.; Franzò, G.; Rimini, E.; Raineri, V.; Gasparotto, A.; Cali, D.

    2000-10-01

    The behavior of Al implanted in silicon has been investigated during thermal oxidation. It has been found that precipitation of Al into Al-O-defect complexes depends on the implant energy, i.e., on the distance of the dopant from the surface. It occurs at 650 keV, but it does not at 2.0 MeV or higher energies. This phenomenon has been explained taking into account the diffusivity of self-interstitials introduced during oxidation, the oxygen present in the Si, the Al concentration, and the annealing out of defects.

  9. Atmospheric ionization induced by precipitating electrons: Comparison of CRAC:EPII model with parametrization model

    CERN Document Server

    Artamonov, A A; Usoskin, I G

    2016-01-01

    A new model CRAC:EPII (Cosmic Ray Atmospheric Cascade: Electron Precipitation Induced Ionization) is presented. The CRAC:EPII is based on Monte Carlo simulation of precipitating electrons propagation and interaction with matter in the Earth atmosphere. It explicitly considers energy deposit: ionization, pair production, Compton scattering, generation of Bremsstrahlung high energy photons, photo-ionization and annihilation of positrons, multiple scattering as physical processes accordingly. The propagation of precipitating electrons and their interactions with atmospheric molecules is carried out with the GEANT4 simulation tool PLANETOCOSMICS code using NRLMSISE 00 atmospheric model. The ionization yields is compared with an analytical parametrization for various energies of incident precipitating electron, using a flux of mono-energetic particles. A good agreement between the two models is achieved. Subsequently, on the basis of balloon-born measured spectra of precipitating electrons at 30.10.2002 and 07.01....

  10. Irradiation-induced nano-voids in strained tin precipitates in silicon

    International Nuclear Information System (INIS)

    We report on self-assembling of spherically shaped voids in nanometer size strained Sn precipitates after irradiation with He+ ions in different conditions. It is found that high-temperature irradiation induces vacancies which are collected by compressively strained Sn precipitates enhancing of out-diffusion of Sn atoms from the precipitates. Nano-voids formation takes place simultaneously with a β- to α-phase transformation in the Sn precipitates. Post-irradiation thermal treatment leads to the removal of voids and a backward transformation of the Sn phase to β-phase. Strain-enhanced separation of point defects along with vacancy assisted Sn out-diffusion and precipitate dissolution are discussed

  11. Lattice-parameter change induced by accommodation of precipitate/matrix misfit; misfitting nitrides in ferrite

    International Nuclear Information System (INIS)

    Upon nitriding of iron-based alloys, development of misfitting coherent nitride precipitates in a ferrite matrix induces an overall expansion of the ferrite lattice. This lattice expansion was quantitatively determined by X-ray diffraction from the change of the lattice parameter of ferrite of homogenously nitrided Fe−Cr and Fe−V alloys. Adopting the experimentally verified (by X-ray diffraction and transmission electron microscopy) notion that the misfitting precipitates diffract coherently with the matrix, the extent of this hydrostatic lattice-strain component could be calculated, in general, as function of the precipitate/matrix misfit, the volume fraction of precipitates and the elastic properties of the matrix and precipitates. The experimentally observed and the predicted dependencies of lattice dilatation agree very well for both nitrided Fe−Cr and Fe−V alloys. This is the first time that this type of lattice expansion was experimentally identified and quantitatively explained

  12. Isolation and identification of Pseudomonas azotoformans for induced calcite precipitation.

    Science.gov (United States)

    Heidari Nonakaran, Siamak; Pazhouhandeh, Maghsoud; Keyvani, Abdullah; Abdollahipour, Fatemeh Zahra; Shirzad, Akbar

    2015-12-01

    Biomineralization is a process by which living organisms produce minerals. The extracellular production of these biominerals by microbes has potential for various bioengineering applications. For example, crack remediation and improvement of durability of concrete is an important goal for engineers and biomineral-producing microbes could be a useful tool in achieving this goal. Here we report the isolation, biochemical characterization and molecular identification of Pseudomonas azotoformans, a microbe that produces calcite and which potentially be used to repair cracks in concrete structures. Initially, 38 bacterial isolates were isolated from soil and cements. As a first test, the isolates were screened using a urease assay followed by biochemical tests for the rate of urea hydrolysis, calcite production and the insolubility of calcite. Molecular amplification and sequencing of a 16S rRNA fragment of selected isolates permitted us to identify P. azotoformans as a good candidate for preparation of biotechnological concrete. This species was isolated from soil and the results show that among the tested isolates it had the highest rate of urea hydrolysis, produced the highest amount of calcite, which, furthermore was the most adhesive and insoluble. This species is thus of interest as an agent with the potential ability to repair cracks in concrete. PMID:26386580

  13. Bacterial Cell Wall-Induced Arthritis: Chemical Composition and Tissue Distribution of Four Lactobacillus Strains

    OpenAIRE

    Šimelyte, Egle; Rimpiläinen, Marja; Lehtonen, Leena; Zhang, Xiang; Toivanen, Paavo

    2000-01-01

    To study what determines the arthritogenicity of bacterial cell walls, cell wall-induced arthritis in the rat was applied, using four strains of Lactobacillus. Three of the strains used proved to induce chronic arthritis in the rat; all were Lactobacillus casei. The cell wall of Lactobacillus fermentum did not induce chronic arthritis. All arthritogenic bacterial cell walls had the same peptidoglycan structure, whereas that of L. fermentum was different. Likewise, all arthritogenic cell walls...

  14. Genetic Circuits and Chemotaxis Induced Bacterial Cloning on Media Plate

    Directory of Open Access Journals (Sweden)

    Wei Jiang

    2016-03-01

    Full Text Available Objective: Synthetic biology demonstrates its broad application perspective in the fields of medicine, chemical synthesis, and the production of energy. Methods: The character that E. coli responding to the stimulus is named as chemo taxis which has widely applications such as measurement efficiency of RBS and promoter, suicide mechanism, oscillation timer etc. Results: A circuit to control the motility of E. coli (run or tumble and form the patterns such as conic curves was constructed. The strength of the promoter and the efficiency of RBS were successfully characterized by using the circuit and chemo taxis that can be used to characterize most of the promoters, the RBS efficiency, terminator efficiency and expression strength of target genes etc. A new suicide mechanism, utilizing the hyperosmotic pressure, was built to induce the growth of E. coli Pattern model is the fundamental force in the coordination of multicellular behavior in the bacterial community or a large complex system. Conclusion: The sources of stress (such as sodium chloride and sucrose be to generate hypertonic very cheap, convenient and environmentally friendly while antibiotics are expensive and have a bad effect on the environment because of drug-resistant microorganisms.

  15. Temperature-induced behavioral switches in a bacterial coral pathogen.

    Science.gov (United States)

    Garren, Melissa; Son, Kwangmin; Tout, Jessica; Seymour, Justin R; Stocker, Roman

    2016-06-01

    Evidence to date indicates that elevated seawater temperatures increase the occurrence of coral disease, which is frequently microbial in origin. Microbial behaviors such as motility and chemotaxis are often implicated in coral colonization and infection, yet little is known about the effect of warming temperatures on these behaviors. Here we present data demonstrating that increasing water temperatures induce two behavioral switches in the coral pathogen Vibrio coralliilyticus that considerably augment the bacterium's performance in tracking the chemical signals of its coral host, Pocillopora damicornis. Coupling field-based heat-stress manipulations with laboratory-based observations in microfluidic devices, we recorded the swimming behavior of thousands of individual pathogen cells at different temperatures, associated with current and future climate scenarios. When temperature reached ⩾23 °C, we found that the pathogen's chemotactic ability toward coral mucus increased by >60%, denoting an enhanced capability to track host-derived chemical cues. Raising the temperature further, to 30 °C, increased the pathogen's chemokinetic ability by >57%, denoting an enhanced capability of cells to accelerate in favorable, mucus-rich chemical conditions. This work demonstrates that increasing temperature can have strong, multifarious effects that enhance the motile behaviors and host-seeking efficiency of a marine bacterial pathogen. PMID:26636553

  16. Bio-precipitation of uranium by two bacterial isolates recovered from extreme environments as estimated by potentiometric titration, TEM and X-ray absorption spectroscopic analyses

    Energy Technology Data Exchange (ETDEWEB)

    Merroun, Mohamed L., E-mail: merroun@ugr.es [Institute of Radiochemistry, Helmholtz Centre Dresden-Rossendorf, Dresden (Germany); Departamento de Microbiologia, Universidad de Granada, Campus Fuentenueva s/n 18071, Granada (Spain); Nedelkova, Marta [Institute of Radiochemistry, Helmholtz Centre Dresden-Rossendorf, Dresden (Germany); Ojeda, Jesus J. [Cell-Mineral Interface Research Programme, Kroto Research Institute, University of Sheffield, Broad Lane, Sheffield S3 7HQ (United Kingdom); Experimental Techniques Centre, Brunel University, Uxbridge, Middlesex UB8 3PH (United Kingdom); Reitz, Thomas [Institute of Radiochemistry, Helmholtz Centre Dresden-Rossendorf, Dresden (Germany); Fernandez, Margarita Lopez; Arias, Jose M. [Departamento de Microbiologia, Universidad de Granada, Campus Fuentenueva s/n 18071, Granada (Spain); Romero-Gonzalez, Maria [Cell-Mineral Interface Research Programme, Kroto Research Institute, University of Sheffield, Broad Lane, Sheffield S3 7HQ (United Kingdom); Selenska-Pobell, Sonja [Institute of Radiochemistry, Helmholtz Centre Dresden-Rossendorf, Dresden (Germany)

    2011-12-15

    Highlights: Black-Right-Pointing-Pointer Precipitation of uranium as U phosphates by natural bacterial isolates. Black-Right-Pointing-Pointer The uranium biomineralization involves the activity of acidic phosphatase. Black-Right-Pointing-Pointer Uranium bioremediation could be achieved via the biomineralization of U(VI) in phosphate minerals. - Abstract: This work describes the mechanisms of uranium biomineralization at acidic conditions by Bacillus sphaericus JG-7B and Sphingomonas sp. S15-S1 both recovered from extreme environments. The U-bacterial interaction experiments were performed at low pH values (2.0-4.5) where the uranium aqueous speciation is dominated by highly mobile uranyl ions. X-ray absorption spectroscopy (XAS) showed that the cells of the studied strains precipitated uranium at pH 3.0 and 4.5 as a uranium phosphate mineral phase belonging to the meta-autunite group. Transmission electron microscopic (TEM) analyses showed strain-specific localization of the uranium precipitates. In the case of B. sphaericus JG-7B, the U(VI) precipitate was bound to the cell wall. Whereas for Sphingomonas sp. S15-S1, the U(VI) precipitates were observed both on the cell surface and intracellularly. The observed U(VI) biomineralization was associated with the activity of indigenous acid phosphatase detected at these pH values in the absence of an organic phosphate substrate. The biomineralization of uranium was not observed at pH 2.0, and U(VI) formed complexes with organophosphate ligands from the cells. This study increases the number of bacterial strains that have been demonstrated to precipitate uranium phosphates at acidic conditions via the activity of acid phosphatase.

  17. Bio-precipitation of uranium by two bacterial isolates recovered from extreme environments as estimated by potentiometric titration, TEM and X-ray absorption spectroscopic analyses

    International Nuclear Information System (INIS)

    Highlights: ► Precipitation of uranium as U phosphates by natural bacterial isolates. ► The uranium biomineralization involves the activity of acidic phosphatase. ► Uranium bioremediation could be achieved via the biomineralization of U(VI) in phosphate minerals. - Abstract: This work describes the mechanisms of uranium biomineralization at acidic conditions by Bacillus sphaericus JG-7B and Sphingomonas sp. S15-S1 both recovered from extreme environments. The U–bacterial interaction experiments were performed at low pH values (2.0–4.5) where the uranium aqueous speciation is dominated by highly mobile uranyl ions. X-ray absorption spectroscopy (XAS) showed that the cells of the studied strains precipitated uranium at pH 3.0 and 4.5 as a uranium phosphate mineral phase belonging to the meta-autunite group. Transmission electron microscopic (TEM) analyses showed strain-specific localization of the uranium precipitates. In the case of B. sphaericus JG-7B, the U(VI) precipitate was bound to the cell wall. Whereas for Sphingomonas sp. S15-S1, the U(VI) precipitates were observed both on the cell surface and intracellularly. The observed U(VI) biomineralization was associated with the activity of indigenous acid phosphatase detected at these pH values in the absence of an organic phosphate substrate. The biomineralization of uranium was not observed at pH 2.0, and U(VI) formed complexes with organophosphate ligands from the cells. This study increases the number of bacterial strains that have been demonstrated to precipitate uranium phosphates at acidic conditions via the activity of acid phosphatase.

  18. Estimation of the impact of climate change-induced extreme precipitation events on floods

    Science.gov (United States)

    Hlavčová, Kamila; Lapin, Milan; Valent, Peter; Szolgay, Ján; Kohnová, Silvia; Rončák, Peter

    2015-09-01

    In order to estimate possible changes in the flood regime in the mountainous regions of Slovakia, a simple physically-based concept for climate change-induced changes in extreme 5-day precipitation totals is proposed in the paper. It utilizes regionally downscaled scenarios of the long-term monthly means of the air temperature, specific air humidity and precipitation projected for Central Slovakia by two regional (RCM) and two global circulation models (GCM). A simplified physically-based model for the calculation of short-term precipitation totals over the course of changing air temperatures, which is used to drive a conceptual rainfall-runoff model, was proposed. In the paper a case study of this approach in the upper Hron river basin in Central Slovakia is presented. From the 1981-2010 period, 20 events of the basin's most extreme average of 5-day precipitation totals were selected. Only events with continual precipitation during 5 days were considered. These 5-day precipitation totals were modified according to the RCM and GCM-based scenarios for the future time horizons of 2025, 2050 and 2075. For modelling runoff under changed 5-day precipitation totals, a conceptual rainfall-runoff model developed at the Slovak University of Technology was used. Changes in extreme mean daily discharges due to climate change were compared with the original flood events and discussed.

  19. Calcium Carbonate Precipitation by Bacillus and Sporosarcina Strains Isolated from Concrete and Analysis of the Bacterial Community of Concrete.

    Science.gov (United States)

    Kim, Hyun Jung; Eom, Hyo Jung; Park, Chulwoo; Jung, Jaejoon; Shin, Bora; Kim, Wook; Chung, Namhyun; Choi, In-Geol; Park, Woojun

    2016-03-01

    Microbially induced calcium carbonate precipitation (CCP) is a long-standing but re-emerging environmental engineering process for production of self-healing concrete, bioremediation, and long-term storage of CO2. CCP-capable bacteria, two Bacillus strains (JH3 and JH7) and one Sporosarcina strain (HYO08), were isolated from two samples of concrete and characterized phylogenetically. Calcium carbonate crystals precipitated by the three strains were morphologically distinct according to field emission scanning electron microscopy. Energy dispersive X-ray spectrometry mapping confirmed biomineralization via extracellular calcium carbonate production. The three strains differed in their physiological characteristics: growth at alkali pH and high NaCl concentrations, and urease activity. Sporosarcina sp. HYO08 and Bacillus sp. JH7 were more alkali- and halotolerant, respectively. Analysis of the community from the same concrete samples using barcoded pyrosequencing revealed that the relative abundance of Bacillus and Sporosarcina species was low, which indicated low culturability of other dominant bacteria. This study suggests that calcium carbonate crystals with different properties can be produced by various CCP-capable strains, and other novel isolates await discovery. PMID:26699752

  20. Bacterial Flora Changes in Conjunctiva of Rats with Streptozotocin-Induced Type I Diabetes

    OpenAIRE

    Yang, Chao; Fei, Yuda; Qin, Yali; Luo, Dan; Yang, Shufei; Kou, Xinyun; Zi, Yingxin; Deng, Tingting; Jin, Ming

    2015-01-01

    Background The microbiota of both humans and animals plays an important role in their health and the development of disease. Therefore, the bacterial flora of the conjunctiva may also be associated with some diseases. However, there are no reports on the alteration of bacterial flora in conjunctiva of diabetic rats in the literature. Therefore, we investigated the changes in bacterial flora in bulbar conjunctiva of rats with streptozotocin (STZ)-induced type I diabetes. Methods A high dose of...

  1. Irradiation-induced creep and microstructural development in precipitation-hardened nickel-aluminium alloys

    International Nuclear Information System (INIS)

    Irradiation-induced creep in solid-solution Ni-8.5 at% AL and precipitation-hardened Ni-13.1 at% Al alloys was studied by bombarding miniaturized specimens with 6.2 MeV protons at 3000C under different tensile stresses. After irradiation transmission electron microscopic (TEM) investigations were made to observe the precipitate structure under irradiation for different experimental parameters. Moreover, the irradiation-induced changes in precipitate structure and changes of Al-concentrations in the matrix in Ni-13.1 at% Al alloys were studied by electrical resistivity measurements during irradiation. For comparison, the electrical resistivity of unirradiated specimens was also measured after thermal aging for different times. For correlation, TEM analysis was performed on irradiated and unirradiated aged specimens. Tensile tests on annealed and aged Ni-Al alloys were also done at various temperatures. (orig./RK)

  2. Precipitation of Energetic Neutral Atoms and Induced Non-Thermal Escape Fluxes from the Martian Atmosphere

    CERN Document Server

    Lewkow, Nicholas

    2014-01-01

    The precipitation of energetic neutral atoms (ENAs), produced through charge exchange (CX) collisions between solar wind (SW) ions and thermal atmospheric gases, is investigated. Subsequent induced non-thermal escape fluxes have been carried out for the Martian atmosphere. Detailed modeling of the ENA energy input and determination of connections between parameters of precipitating ENAs and resulting escape fluxes, reflection coefficients of fast atoms from the Mars atmosphere, and altitude dependent ENA energy distributions are established using Monte Carlo (MC) simulations of the precipitation process with accurate quantum mechanical (QM) cross sections. Detailed descriptions of secondary hot (SH) atoms and molecules induced by ENAs have been obtained for a better understanding of the mechanisms responsible for atmospheric escape and evolution. The effects of using isotropic hard sphere (HS) cross sections as compared to realistic, anisotropic quantum cross sections are examined for energy-deposition profil...

  3. Microbial community dynamics induced by rewetting dry soil: summer precipitation matters

    Science.gov (United States)

    Barnard, Romain; Osborne, Catherine; Firestone, Mary

    2015-04-01

    The massive soil CO2 efflux associated with rewetting dry soils after the dry summer period significantly contributes to the annual carbon budget of Mediterranean grasslands. Rapid reactivation of soil heterotrophic activity and available carbon are both required to fuel the CO2 pulse. Better understanding of the effects of altered summer precipitation on the metabolic state of indigenous microorganisms may be important in predicting future changes in carbon cycling. We investigated the effects of a controlled rewetting event on the soil CO2 efflux pulse and on the present (DNA-based) and potentially active (rRNA-based) soil bacterial and fungal communities in intact soil cores previously subjected to three different precipitation patterns over four months (full summer dry season, extended wet season, and absent dry season). Phylogenetic marker genes for bacteria (16S) and fungi (28S) were sequenced before and after rewetting, and the abundance of these genes and transcripts was measured. Even after having experienced markedly different antecedent water conditions, the potentially active bacterial communities showed a consistent wet-up response, reflecting contrasting life-strategies for different groups. Moreover, we found a significant positive relation between the extent of change in the structure of the potentially active bacterial community and the magnitude of the CO2 pulse upon rewetting dry soils. We suggest that the duration of severe dry conditions (predicted to change under future climate) is important in conditioning the response potential of the soil bacterial community to wet-up as well as in framing the magnitude of the associated CO2 pulse.

  4. Toxicity effects on metal sequestration by microbially-induced carbonate precipitation.

    Science.gov (United States)

    Mugwar, Ahmed J; Harbottle, Michael J

    2016-08-15

    Biological precipitation of metallic contaminants has been explored as a remedial technology for contaminated groundwater systems. However, metal toxicity and availability limit the activity and remedial potential of bacteria. We report the ability of a bacterium, Sporosarcina pasteurii, to remove metals in aerobic aqueous systems through carbonate formation. Its ability to survive and grow in increasingly concentrated aqueous solutions of zinc, cadmium, lead and copper is explored, with and without a metal precipitation mechanism. In the presence of metal ions alone, bacterial growth was inhibited at a range of concentrations depending on the metal. Microbial activity in a urea-amended medium caused carbonate ion generation and pH elevation, providing conditions suitable for calcium carbonate bioprecipitation, and consequent removal of metal ions. Elevation of pH and calcium precipitation are shown to be strongly linked to removal of zinc and cadmium, but only partially linked to removal of lead and copper. The dependence of these effects on interactions between the respective metal and precipitated calcium carbonate are discussed. Finally, it is shown that the bacterium operates at higher metal concentrations in the presence of the urea-amended medium, suggesting that the metal removal mechanism offers a defence against metal toxicity. PMID:27136729

  5. Femtosecond laser filament induced condensation and precipitation in a cloud chamber

    OpenAIRE

    Jingjing Ju; Jiansheng Liu; Hong Liang; Yu Chen; Haiyi Sun; Yonghong Liu; Jingwei Wang; Cheng Wang; Tiejun Wang; Ruxin Li; Zhizhan Xu; See Leang Chin

    2016-01-01

    A unified picture of femtosecond laser induced precipitation in a cloud chamber is proposed. Among the three principal consequences of filamentation from the point of view of thermodynamics, namely, generation of chemicals, shock waves and thermal air flow motion (due to convection), the last one turns out to be the principal cause. Much of the filament induced chemicals would stick onto the existing background CCN’s (Cloud Condensation Nuclei) through collision making the latter more active....

  6. Strain-induced transformation of amorphous spherical precipitates into platelets: Application to oxide particles in silicon

    International Nuclear Information System (INIS)

    The spherical shape of an amorphous precipitate becomes unstable if the combination P2R of precipitate radius R and pressure P exceeds some critical value. This critical value was found to be about 4.44 Gσ, where G is the matrix shear modulus and σ is the specific energy of the precipitate/matrix interface. Once this instability criterion is fulfilled, the initially spherical particle will reduce the total free energy (the sum of strain energy and the surface energy) by becoming a thin oblate spheroid (effectively, a platelet). The actual pressure P in the course of oxygen precipitation in silicon is controlled by a high self-interstitial supersaturation caused by emission of self-interstitials by growing precipitates. The duration of annealing necessary to reach the stage of collapse of spheres into platelets is calculated as a function of temperature and the precipitate density. Calculated results are compatible with the experimentally observed annealing conditions for platelet formation. Another important example of sphere to platelet transformation is microdefect formation in vacancy-type silicon. In this case a large negative value of P is sufficient to induce collapse. [copyright] 2001 American Institute of Physics

  7. Detrimental Effect of the Proteasome Inhibitor, Bortezomib in Bacterial Superantigen- and Lipopolysaccharide-induced Systemic Inflammation

    OpenAIRE

    Tilahun, Ashenafi Y.; Theuer, Jayne E; Patel, Robin; David, Chella S.; Rajagopalan, Govindarajan

    2010-01-01

    Bacterial superantigen (BSAg)–induced toxic shock syndrome (TSS) and bacterial lipopolysaccharide (LPS)–induced shock are characterized by severe systemic inflammation. As nuclear factor κB (NFκB) plays an important role in inflammation and bortezomib, a proteasome inhibitor widely used in cancer chemotherapy, is a potent inhibitor of NFκB activation, we evaluated the therapeutic and prophylactic use of bortezomib in these conditions using murine models. Bortezomib prophylaxis significantly r...

  8. Bacterial carbonatogenesis

    International Nuclear Information System (INIS)

    Several series of experiments in the laboratory as well as in natural conditions teach that the production of carbonate particles by heterotrophic bacteria follows different ways. The 'passive' carbonatogenesis is generated by modifications of the medium that lead to the accumulation of carbonate and bicarbonate ions and to the precipitation of solid particles. The 'active' carbonatogenesis is independent of the metabolic pathways. The carbonate particles are produced by ionic exchanges through the cell membrane following still poorly known mechanisms. Carbonatogenesis appears to be the response of heterotrophic bacterial communities to an enrichment of the milieu in organic matter. The active carbonatogenesis seems to start first. It is followed by the passive one which induces the growth of initially produced particles. The yield of heterotrophic bacterial carbonatogenesis and the amounts of solid carbonates production by bacteria are potentially very high as compared to autotrophic or chemical sedimentation from marine, paralic or continental waters. Furthermore, the bacterial processes are environmentally very ubiquitous; they just require organic matter enrichment. Thus, apart from purely evaporite and autotrophic ones, all Ca and/or Mg carbonates must be considered as from heterotrophic bacterial origin. By the way, the carbon of carbonates comes from primary organic matter. Such considerations ask questions about some interpretations from isotopic data on carbonates. Finally, bacterial heterotrophic carbonatogenesis appears as a fundamental phase in the relationships between atmosphere and lithosphere and in the geo-biological evolution of Earth. (author)

  9. Subionospheric VLF Observations of Transmitter-Induced Precipitation of Inner Radiation Belt Electrons

    Science.gov (United States)

    Golkowski, M.; Inan, U.; Peter, W.

    2006-12-01

    Ionospheric effects of energetic electron precipitation induced by controlled injection of VLF signals from a ground based transmitter are observed via subionospheric VLF remote sensing. The 21.4 kHz NPM transmitter in Lualualei, Hawaii is keyed ON-OFF in a periodic sequence lasting 30 minutes. The same periodicity is observed in the amplitude and phase of the sub-ionospherically propagating signals of the 24.8 kHz NLK (Jim Creek, Washington) and 25.2 kHz NLM (LaMoure, North Dakota) transmitters measured at Midway Island. The NLM and NLK signal paths pass underneath the region of electron precipitation induced by the NPM transmitter, as predicted theoretically on the basis of cyclotron resonance interaction between energetic electrons and obliquely propagating whistler-mode waves injected by NPM. The ionospheric disturbances are consistent with that caused by conductivity enhancements resulting from secondary ionization produced by the precipitation of pitch angle scattered electrons in the 100-300 keV energy range. Periodic perturbations of the NLK signal observed at Palmer, Antarctica suggest that energetic electrons are scattered into both the bounce and drift loss cones. Utilizing a comprehensive model of magnetospheric wave-particle interaction, ionospheric energy deposition, and subionospheric VLF propagation, the precipitated energy flux is estimated to peak at L ~ 2 and ~ 3 x 10-4 [ergs s-1 cm-2

  10. Precipitation of energetic neutral atoms and induced non-thermal escape fluxes from the Martian atmosphere

    Energy Technology Data Exchange (ETDEWEB)

    Lewkow, N. R.; Kharchenko, V. [Department of Physics, University of Connecticut, Storrs, CT 06269 (United States)

    2014-08-01

    The precipitation of energetic neutral atoms, produced through charge exchange collisions between solar wind ions and thermal atmospheric gases, is investigated for the Martian atmosphere. Connections between parameters of precipitating fast ions and resulting escape fluxes, altitude-dependent energy distributions of fast atoms and their coefficients of reflection from the Mars atmosphere, are established using accurate cross sections in Monte Carlo (MC) simulations. Distributions of secondary hot (SH) atoms and molecules, induced by precipitating particles, have been obtained and applied for computations of the non-thermal escape fluxes. A new collisional database on accurate energy-angular-dependent cross sections, required for description of the energy-momentum transfer in collisions of precipitating particles and production of non-thermal atmospheric atoms and molecules, is reported with analytic fitting equations. Three-dimensional MC simulations with accurate energy-angular-dependent cross sections have been carried out to track large ensembles of energetic atoms in a time-dependent manner as they propagate into the Martian atmosphere and transfer their energy to the ambient atoms and molecules. Results of the MC simulations on the energy-deposition altitude profiles, reflection coefficients, and time-dependent atmospheric heating, obtained for the isotropic hard sphere and anisotropic quantum cross sections, are compared. Atmospheric heating rates, thermalization depths, altitude profiles of production rates, energy distributions of SH atoms and molecules, and induced escape fluxes have been determined.

  11. The variability of temperature and precipitation over Korean Peninsula induced by off-equatorial western Pacific precipitation during boreal summer

    Science.gov (United States)

    Jeong, Yerim; Ham, Yoo-Geun

    2016-04-01

    The convection activity and variability are active in Tropic-subtropic area because of equatorial warm pool. The variability's impacts on not only subtropic also mid-latitude. The impact effects on through teleconnection between equatorial and mid-latitude like Pacific-Japan(PJ) pattern. In this paper, two groups are divided based on PJ pattern and JJA Korean precipitation for the analysis that Korean precipitation is affected by PJ pattern. 'PJ+NegKorpr' is indicated when PJ pattern occur that JJA(Jun-July_August) Korean precipitation has negative value. In this case, positive precipitation in subtropic is expanded to central Pacific. And the positive precipitation's pattern is increasing toward north. Because, the subtropical south-eastly wind is forming subtropical precipitation's pattern through cold Kelvin wave is expanding eastward. Cold Kelvin wave is because of Indian negative SST. Also, Korea has negative moisture advection and north-eastly is the role that is moving high-latitude's cold and dry air to Korea. So strong high pressure is formed in Korea. The strong high pressure involves that short wave energy is increasing on surface. As a result, The surface temperature is increased on Korea. But the other case, that 'PJ_Only' case, is indicated when PJ pattern occur and JJA Korean precipitation doesn't have negative value over significant level. The subtropic precipitation's pattern in 'PJ_Only' shows precipitation is confined in western Pacific and expended northward to 25°N near 130°E. And tail of precipitation is toward equatorial(south-eastward). Also, Korean a little positive moisture advection and south-westly is the role that is moving low-latitude's warm and wet air to Korea. So weak high pressure is formed in Korea. The weak high pressure influence amount of short wave energy, so Korean surface temperature is lower. In addition, the case of 'PJ_Only' and Pacific Decal Oscillation(PDO) are occur at the same time has negative impact in Korea

  12. Demodex-associated bacterial proteins induce neutrophil activation.

    LENUS (Irish Health Repository)

    2012-02-01

    Background: Patients with rosacea demonstrate a higher density of Demodex mites in their skin than controls. A bacterium isolated from a Demodex mite from a patient with papulopustular rosacea (PPR) was previously shown to provoke an immune response in patients with PPR or ocular rosacea thus suggesting a possible role for bacterial proteins in the etiology of this condition. Objectives: To examine the response of neutrophils to proteins derived from a bacterium isolated from a Demodex mite. Methods: Bacterial cells were lysed and proteins were partially purified by AKTA-FPLC. Isolated neutrophils were exposed to bacterial proteins and monitored for alterations in migration, degranulation and cytokine production. Results: Neutrophils exposed to proteins from Bacillus cells demonstrated increased levels of migration and elevated release of MMP-9, an enzyme known to degrade collagen and cathelicidin, an antimicrobial peptide. In addition neutrophils exposed to the bacterial proteins demonstrated elevated rates of Il-8 and TNF-alpha production. Conclusions: Proteins produced by a bacterium isolated from a Demodex mite have the ability to increase the migration, degranulation and cytokine production abilities of neutrophils. These results suggest that bacteria may play a role in the inflammatory erythema associated with rosacea.

  13. Dark repair of UV-induced lesions in bacterial DNA

    International Nuclear Information System (INIS)

    The mechanism of photochemical reaction resulting in the formation of pyrimidine base dimers in DNA is briefly described. Many bacterial species are able to excise the fragments of singlestranded DNA containing pyrimidine dimers, and to rebuild the lacking oligonucleotide fragment. Enzyme system acting in the restitution of damaged DNA to its native form is reviewed. (author)

  14. Femtosecond laser filament induced condensation and precipitation in a cloud chamber

    Science.gov (United States)

    Ju, Jingjing; Liu, Jiansheng; Liang, Hong; Chen, Yu; Sun, Haiyi; Liu, Yonghong; Wang, Jingwei; Wang, Cheng; Wang, Tiejun; Li, Ruxin; Xu, Zhizhan; Chin, See Leang

    2016-05-01

    A unified picture of femtosecond laser induced precipitation in a cloud chamber is proposed. Among the three principal consequences of filamentation from the point of view of thermodynamics, namely, generation of chemicals, shock waves and thermal air flow motion (due to convection), the last one turns out to be the principal cause. Much of the filament induced chemicals would stick onto the existing background CCN’s (Cloud Condensation Nuclei) through collision making the latter more active. Strong mixing of air having a large temperature gradient would result in supersaturation in which the background CCN’s would grow efficiently into water/ice/snow. This conclusion was supported by two independent experiments using pure heating or a fan to imitate the laser-induced thermal effect or the strong air flow motion, respectively. Without the assistance of any shock wave and chemical CCN’s arising from laser filament, condensation and precipitation occurred. Meanwhile we believe that latent heat release during condensation /precipitation would enhance the air flow for mixing.

  15. Irradiation-induced precipitation and mechanical properties of vanadium alloys at <430 C

    Energy Technology Data Exchange (ETDEWEB)

    Chung, H.M.; Gazda, J.; Smith, D.L. [Argonne National Lab., IL (United States)

    1998-09-01

    Recent attention to V-base alloys has focused on the effect of low-temperature (<430 C) irradiation on tensile and impact properties of V-4Cr-4Ti. In previous studies, dislocation channeling, which causes flow localization and severe loss of work-hardening capability, has been attributed to dense, irradiation-induced precipitation of very fine particles. However, efforts to identify the precipitates were unsuccessful until now. In this study, analysis by transmission electron microscopy (TEM) was conducted on unalloyed V, V-5Ti, V-3Ti-1Si, and V-4Cr-4Ti specimens that were irradiated at <430 C in conventional and dynamic helium charging experiments. By means of dark-field imaging and selected-area-diffraction analysis, the characteristic precipitates were identified to be (V,Ti{sub 1{minus}x})(C,O,N). In V-3Ti-1Si, precipitation of (V,Ti{sub 1{minus}x})(C,O,N) was negligible at <430 C, and as a result, dislocation channeling did not occur and work-hardening capability was high.

  16. Decolorization of acid and basic dyes: understanding the metabolic degradation and cell-induced adsorption/precipitation by Escherichia coli.

    Science.gov (United States)

    Cerboneschi, Matteo; Corsi, Massimo; Bianchini, Roberto; Bonanni, Marco; Tegli, Stefania

    2015-10-01

    Escherichia coli strain DH5α was successfully employed in the decolorization of commercial anthraquinone and azo dyes, belonging to the general classes of acid or basic dyes. The bacteria showed an aptitude to survive at different pH values on any dye solution tested, and a rapid decolorization was obtained under aerobic conditions for the whole collection of dyes. A deep investigation about the mode of action of E. coli was carried out to demonstrate that dye decolorization mainly occurred via three different pathways, specifically bacterial induced precipitation, cell wall adsorption, and metabolism, whose weight was correlated with the chemical nature of the dye. In the case of basic azo dyes, an unexpected fast decolorization was observed after just 2-h postinoculation under aerobic conditions, suggesting that metabolism was the main mechanism involved in basic azo dye degradation, as unequivocally demonstrated by mass spectrometric analysis. The reductive cleavage of the azo group by E. coli on basic azo dyes was also further demonstrated by the inhibition of decolorization occurring when glucose was added to the dye solution. Moreover, no residual toxicity was found in the E. coli-treated basic azo dye solutions by performing Daphnia magna acute toxicity assays. The results of the present study demonstrated that E. coli can be simply exploited for its natural metabolic pathways, without applying any recombinant technology. The high versatility and adaptability of this bacterium could encourage its involvement in industrial bioremediation of textile and leather dyeing wastewaters. PMID:26062529

  17. Production of bacterial leaf blight resistant mulberry through tissue culture and induced mutation

    International Nuclear Information System (INIS)

    Mon Noi multiple shoots obtained from axillary buds in vitro cultures were induced mutation by irradiating with gamma rays at the optimum dose (LD 50) of 40 Gy. In vitro inoculation technique for bacterial blight disease of mulberry caused by Pseudomonas syringae p v. mori was done by leaf-rub method, using bacterial suspension at 107 cells per milliliter which was the lowest concentration to cause highest disease severity. A total of 8357 Mon Noi gamma irradiated plantlets in 7-11 generations were screened for bacterial blight disease resistance. Eighteen plants survived and free from bacterial contamination. These surviving plants were in vitro rapid multiplication then screened for disease resistance in greenhouse. At present, only 4 lines from 18 plants are selected

  18. Rotation-Induced Polymorphic Transitions in Bacterial Flagella

    Science.gov (United States)

    Vogel, Reinhard; Stark, Holger

    2013-04-01

    Bacteria propel themselves with the help of rotating helical flagella. They change their swimming direction during tumbling events in order to increase, for example, their supply of nutrients (chemotaxis). During tumbling a bacterial flagellum assumes different polymorphic states. Based on a continuum model for the motor-flagellum system, we demonstrate that a changing motor torque can initiate these polymorphic transformations. In particular, we investigate the run-and-stop tumble strategy of Rhodobacter sphaeroides which uses a coiled-to-normal transition in its single flagellum. We also show that torque reversal in single-flagellated Escherichia coli generates a normal-to-curly I transition as observed for tumbling E. coli that swim with a bundle of several flagella.

  19. Induced mutation for bacterial blight resistance in mulberry

    International Nuclear Information System (INIS)

    Buds of mulberry varieties Phai, Noi and SK2502 were irradiated by gamma radiation and then cultured on the Murashige and Skoog medium containing 1.0 mg/l of BA and Casein hydrolysate 1g/l. After proliferation of shoots, they were transferred to the rooting medium (MS + NAA 0.2 mg/l + IBA 0.2 mg/l). Plantlets of mulberry var. Noi were transplanted to soil in greenhouse for screening for bacterial blight disease resistance. All plants showed symptoms of disease. In vitro inoculation of the pathogen, Pseudomonas syringae p.v. mori, on plantlets of the mulberry var. Noi and Phai was conducted. All plants showed symptoms of the disease and died. In vitro screening will be continued with much larger populations in order to select the resistance traits. (author). 4 refs, 4 tabs

  20. Numerical investigation of microbially induced calcite precipitation as a leakage mitigation technology

    Science.gov (United States)

    Hommel, Johannes; Cunningham, Alfred; Helmig, Rainer; Ebigbo, Anozie; Class, Holger

    2013-04-01

    One of the key issues of carbon capture and storage (CCS) is the long term security of the storage site, i.e. the permanent enclosure of the stored carbon dioxide (CO2) in the target reservoir. Amongst the different storage mechanisms, cap rock integrity is crucial for preventing leakage of CO2. Leakage to shallower regions or back to the atmosphere would reduce the efficiency and pose a threat to the environment, for example to groundwater resources or human residence areas. Ureolysis-driven microbially induced calcite precipitation (MICP) is one of the technologies in the current focus of research aiming at mitigation of potential leakage by sealing high permeability zones in cap rocks. In our current work, a numerical model has been developed and validated using MICP experiments in sand filled columns under atmospheric pressure conditions [1]. Based on new experimental data under reservoir pressure conditions in sandstone rock cores [2] the model will be improved and optimized. The focus is on extending the model to 3-D radial flow and the validation of the model under conditions relevant for field scale CCS. The improved numerical model will be used to design field scale MICP experiments and evaluate the results of those experiments to get a better understanding of the potential of MICP as a sealing technology. [1] Ebigbo A., Phillips A., Gerlach R., Helmig R., Cunningham A.B., Class H., and Spangler L. H. (2012), Darcy-scale modeling of microbially induced carbonate mineral precipitation in sand columns, Water Resour. Res., 48 [2] Phillips A., Lauchnor E., Eldring J., Esposito R., Mitchell A.C., Gerlach R., Cunningham A.B., and Spangler L. H. (2013), Potential CO2 leakage reduction through biofilm-induced calcium carbonate precipitation, Environ. Sci. Technol., 47(1)

  1. Sun-stirred Kraken Mare: Circulation in Titan's seas induced by solar heating and methane precipitation

    Science.gov (United States)

    Tokano, Tetsuya; Lorenz, Ralph D.

    2016-05-01

    Density-driven circulation in Titan's seas forced by solar heating and methane evaporation/precipitation is simulated by an ocean circulation model. If the sea is transparent to sunlight, solar heating can induce anti-clockwise gyres near the sea surface and clockwise gyres near the sea bottom. The gyres are in geostrophic balance between the radially symmetric pressure gradient force and Coriolis force. If instead the sea is turbid and most sunlight is absorbed near the sea surface, the sea gets stratified in warm seasons and the circulation remains weak. Precipitation causes compositional stratification of the sea to an extent that the sea surface temperature can be lower than the sea interior temperature without causing a convective overturning. Non-uniform precipitation can also generate a latitudinal gradient in the methane mole fraction and density, which drives a meridional overturning with equatorward currents near the sea surface and poleward currents near the sea bottom. However, gyres are more ubiquitous than meridional overturning.

  2. Femtosecond Laser Induced Ba2TiSi2O8 Crystal Precipitation in Glass

    Directory of Open Access Journals (Sweden)

    LU Bo,DAI Ye,MA Hong-Liang

    2009-07-01

    Full Text Available Ba2TiSi2O8 crystal was space-selectively precipitated in a 33.3BaO-16.7TiO2-50.0SiO2 glass sample by using a high repetition femtosecond laser with 800nm, 150fs and 250kHz. After the femtosecond laser irradiated for a period of time, the luminescence of the focused point could chang from 800nm red light to 400nm blue one due to second-order optical nonlinearity of the precipitated crystal. Raman spectra show Ba2TiSi2O8 crystal is formed. During the femtosecond laser irradiation, heat accumulation effect occurs in the irradiated region by continuously absorbing pulse energy, and the glass would be heated to its crystallization temperature, therefore Ba2TiSi2O8 may grow or precipitate in the crystallized region. Furthermore, the Raman spectra at different positions of the irradiated region demonstrate that Ba2TiSi2O8 crystal grows more effectively in the center compared with that in the outers. This result is agreeable with the femtosecond laserª²induced temperature distribution because the temperature increases more quickly in the focused region.

  3. Effect of Dissolved and Precipitated Niobium in Microalloyed Steel on Deformation Induced Ferrite Transformation (DIFT)

    Institute of Scientific and Technical Information of China (English)

    LIU Qing-you; DENG Su-huai; SUN Xin-jun; DONG Han; WENG Yu-qing

    2009-01-01

    Hot deformation processing was designed to study the effects of niobium (Nb) on DIFT. A prestrain of 0. 51 at 880 ℃ for different isothermal time was used for adjusting the deformed austenite constitution and Nb existing state, followed by a secondary heavy deformation at 780℃ for inducing the ferrite transformation. The volume fraction and grain size of deformation induced ferrite (DIF) obtained at different isothermal time between double hits were investigated. It was found that Nb dissolved in austenite is adverse to DIFT; however, the precipitation of Nb is beneficial to DIFT. As Nb plays the role in the conventional TMCP, Nb retards the recrystallization of deformed austenite and enhances the deformation stored energy in the multipass deformation, and in result, Nb promotes DIFT.

  4. Liquid enteral diets induce bacterial translocation by increasing cecal flora without changing intestinal motility.

    Science.gov (United States)

    Haskel, Y; Udassin, R; Freund, H R; Zhang, J M; Hanani, M

    2001-01-01

    The aim of this study was to determine the contribution of intestinal motility and cecal bacterial overgrowth to liquid diet-induced bacterial translocation (BT). Three different commercially available liquid diets were offered to mice for 1 week. BT to the mesenteric lymph nodes (MLN), spleen, and liver were examined as well as cecal bacterial counts and populations, small bowel length and weight, and histopathologic changes in the ileal and jejunal mucosa. In addition, the effect of the various diets on intestinal motility was measured by the transit index of a charcoal mixture introduced into the stomach. The incidence of BT to the mesenteric lymph nodes was significantly and similarly increased (p Vivonex (30%), Ensure (30%), and Osmolite (33%) compared with chow-fed controls (0%). Compared with chow-fed controls, all three liquid diets were associated with the development of cecal bacterial overgrowth (p < .01). There were no significant changes in the transit index for the three liquid diet groups compared with the chow-fed controls. BT to the MLN was induced by all three liquid diets tested, casting some doubts as to their role in preventing BT in clinical use. BT was associated with a statistically significant increase in cecal bacterial count but was not associated with gut motility changes in this model. In fact, no significant changes in intestinal motility were noted in all groups tested. PMID:11284471

  5. A new model for the spectral induced polarization signature of bacterial growth in porous media

    Science.gov (United States)

    Zhang, C.; Revil, A.; Atekwana, E. A.; Jardani, A.; Smith, S.

    2012-12-01

    Recent biogeophysics studies demonstrated the sensitivity of complex conductivity to bacterial growth and microbial mediated mineral transformations in porous media. Frequency-domain induced polarization is a minimally invasive manner to measure the complex conductivity of a material over a broad range of frequencies. The real component of complex conductivity is associated with electromigration of the charge carriers, and the imaginary component represents reversible energy storage of charge carriers at polarization length scales. Quantitative relationship between frequency-domain induced polarization responses and bacterial growth and decay in porous media is analyzed in this study using a new developed model. We focus on the direct contribution of bacteria themselves to the complex conductivity in porous media in the absence of biomineralization. At low frequencies, the induced polarization of bacteria (α-polarization) is related to the properties of the electrical double layer surrounding the membrane surface of bacteria. Surface conductivity and α-polarization are due to the Stern layer of the counterions occurring in a brush of polymers coating the surface of the bacteria, and can be related to the cation exchange capacity of the bacteria. From the modeling results, at low frequencies (bacterial populations are usually described by Monod kinetics, we show that the changes in imaginary conductivity with time can be used to determine bacterial growth kinetics parameters such as the growth and endogenous decay coefficient.

  6. The role of the bacterial mismatch repair system in SOS-induced mutagenesis: a theoretical background

    International Nuclear Information System (INIS)

    A theoretical study is performed of the possible role of the methyl-directed mismatch repair system in the ultraviolet-induced mutagenesis of Escherichia coli bacterial cells. For this purpose, a mathematical model of the bacterial mismatch repair system is developed. Within this model, the key pathways of this type of repair are simulated on the basis of modern experimental data related to its mechanisms. Here we have modelled in detail five main pathways of DNA misincorporation removal with different DNA exonucleases. Using our calculations, we have tested the hypothesis that the bacterial mismatch repair system is responsible for the removal of the nucleotides misincorporated by DNA polymerase V (the UmuD'2C complex) during ultraviolet-induced SOS response. For the theoretical analysis of the mutation frequency, we have combined the proposed mathematical approach with the model of SOS-induced mutagenesis in the E.coli bacterial cell developed earlier. Our calculations support the hypothesis that methyl-directed mismatch repair influences the mutagenic effect of ultraviolet radiation

  7. Ion beam induced crystallization of amorphous Si from NiSi2 precipitates: An in situ study

    International Nuclear Information System (INIS)

    By first growing NiSi2 precipitates in a-Si and then irradiating with a 150 keV Si beam, the authors have studied ion beam induced epitaxial crystallization (IBIEC) of Si initiated at a-Si/NiSi2 precipitate interfaces. The growth shape and its temperature dependence are studied in-beam via in situ transmission electron microscopy. Interface roughening is evidenced. Preliminary results for the Co-Si system are also reported

  8. Changes of Urban Boundary Layer Thermodynamic Stability Induced by Heat Island Effect and Their Influences on Precipitation

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    [Objective] The aim was to study the characteristics of the changes of the urban boundary layer thermodynamic stability induced by heat island effect and their influences on precipitation.[Method] Proceeding from the thermodynamic equation,the changes of urban boundary layer thermodynamic stability caused by the urban heat disturbance and the mean state of heat island effect were discussed.The influence of the changes of urban boundary layer thermodynamic stability on the precipitation was expounded.Combini...

  9. Induced precipitation recycling (IPR) strategy to increase forest growth and regional rainfall

    Science.gov (United States)

    Layton, K. M.; Ellison, D.

    2013-12-01

    This presentation describes a project designed to capitalize on observed natural interactions between forest cover and the hydrologic cycle in order to increase available water supplies in arid regions, and to purify degraded water resources. An approach is presented to transition observed precipitation recycling effects into practical applications. Higher regional precipitation can be induced by promoting favorable conditions through afforestation and the irrigation of afforested land (IPR). Waste-water streams processed by the forest can increase local precipitation through the by-product evapotranspiration (ET). The proposed project illustrates how increased runoff from induced precipitation can help mitigate chronic regional water shortages in Southern California, using available degraded water resources. Each day, several hundred million gallons of treated sewage and excess storm water from the Los Angeles basin are channeled to the ocean for disposal. A portion of this can irrigate afforested land, initiating the IPR process. The afforested site likewise produces additional beneficial ecosystem services including nutrient management (of the sewage stream), carbon sequestration (from new growth), cooling of urban 'heat islands', and flood control. Research will explore interactions between ET plumes and local geography to aid the selection of afforestation sites and ensure increased precipitation over land, supporting the regional water supply. The IPR project is designed to manage risk and complexity through phased implementation. While no unproven technologies are used, there are uncertainties in applying theories from scientific research. During the 'pilot phase', initial afforestation site(s) will support research to examine the interactions of irrigated forest cover and IPR. As a proof of concept, this will develop the analytical basis for large-scale expansion. Once the theoretical foundation has been established, the project can expand to more irrigated

  10. Evidence of Urban-Induced Precipitation Variability in Arid Climate Regimes

    Science.gov (United States)

    Shepherd, J. Marshall

    2005-01-01

    Water is essential to life in the Earth system. The water cycle components that sustain life are becoming more scarce and polluted. The most recent (1999-2004) drought experienced in the southwestern United States is the seventh worst in the approximately 500-year proxy tree-ring record. As a result, many regions contemplated drought emergencies in which severe water restrictions are implemented. Though larger weather and climate processes likely control drought processes, there is increasing evidence that anthropogenic or human-related activities can significantly alter precipitation processes. Urbanization is an example of anthropogenic forcing. Recent studies continue to provide evidence that urban environments can modify or induce precipitation under a specific set of conditions. Arid and semi-arid regions of the southwestern United States and other parts of the world are rapidly developing and placing greater demands on the environmental system. In the past fifty years, Phoenix has expanded from a predominantly agricultural center to an urbanized region with extent 700 percent larger than its size in the middle of the twentieth century. Riyadh's population grew from about a half million people in 1972 to almost two million by 2000. Saudi Arabia experienced urbanization later than many other countries; in the early 1970s its urban-rural ratio was still about 1:3. By 1990 the ratio had reversed to about 3:l. In the mid-1970s Riyadh's population was increasing by about 10 percent a year. Irrigation also significantly increased between 1972 and 1990 southeast of Riyadh. The study employs a 108-year precipitation historical data record, global climate observing network observations and satellite data to identify possible anomalies in rainfall in and around two major arid urban areas, Phoenix, Arizona and Riyadh, Saudi Arabia. It provides statistically sound evidence that rainfall distribution and magnitude is statistically different in post-urban than in pre

  11. TLR2-induced IL-10 production impairs neutrophil recruitment to infected tissues during neonatal bacterial sepsis.

    Science.gov (United States)

    Andrade, Elva B; Alves, Joana; Madureira, Pedro; Oliveira, Liliana; Ribeiro, Adília; Cordeiro-da-Silva, Anabela; Correia-Neves, Margarida; Trieu-Cuot, Patrick; Ferreira, Paula

    2013-11-01

    Sepsis is the third most common cause of neonatal death, with Group B Streptococcus (GBS) being the leading bacterial agent. The pathogenesis of neonatal septicemia is still unsolved. We described previously that host susceptibility to GBS infection is due to early IL-10 production. In this study, we investigated whether triggering TLR2 to produce IL-10 is a risk factor for neonatal bacterial sepsis. We observed that, in contrast to wild-type (WT) pups, neonatal TLR2-deficient mice were resistant to GBS-induced sepsis. Moreover, if IL-10 signaling were blocked in WT mice, they also were resistant to sepsis. This increased survival rate was due to an efficient recruitment of neutrophils to infected tissues that leads to bacterial clearance, thus preventing the development of sepsis. To confirm that IL-10 produced through TLR2 activation prevents neutrophil recruitment, WT pups were treated with the TLR2 agonist Pam3CSK4 prior to nebulization with the neutrophil chemotactic agent LTB4. Neutrophil recruitment into the neonatal lungs was inhibited in pups treated with Pam3CSK4. However, the migration was restored in Pam3CSK4-treated pups when IL-10 signaling was blocked (either by anti-IL-10R mAb treatment or by using IL-10-deficient mice). Our findings highlight that TLR2-induced IL-10 production is a key event in neonatal susceptibility to bacterial sepsis. PMID:24078699

  12. Estimation of unknown parameters to improve modeling of Microbially Induced Calcite Precipitation

    Science.gov (United States)

    Hommel, Johannes; Cunningham, Alfred B.; Helmig, Rainer; Ebigbo, Anozie; Class, Holger

    2014-05-01

    One of the key issues of underground gas storage is the long-term security of the storage site. Amongst the different storage mechanisms, cap-rock integrity is crucial for preventing leakage of the stored gas due to buoyancy into shallower aquifers or, ultimately, the atmosphere. This leakage would reduce the efficiency of underground gas storage and pose a threat to the environment. Ureolysis-driven, Microbially Induced Calcite Precipitation (MICP) is one of the technologies in the current focus of current research aiming at mitigation of potential leakage by sealing high-permeability zones in cap rocks. Previously, a numerical model, capable of simulating two-phase flow and MICP processes, was developed and validated against MICP experiments [1]. The model has been improved based on new experimental findings of our collaborators at MSU with respect to the microbial ureolysis kinetics as well as the impact of biomineralization on permeability. The number of fitting parameters used in the model has been reduced and the remaining ones have been refitted by inverse modeling. With the improved implementation of those processes relevant for modeling MICP, simulation results are expected to better match the observed features of a variety of MICP experiments in different porous media, flow regimes and under varying injection schemes conducted by our collaborators at MSU. References [1] A. Ebigbo, A.J. Phillips, R. Gerlach, R. Helmig, A.B. Cunningham, H. Class, L.H. Spangler. Darcy-scale modeling of microbially induced carbonate mineral precipitation in sand columns. Water Resources Research, 48, (2012)

  13. Functionalization of fabrics with PANI/CuO nanoparticles by precipitation route for anti-bacterial applications

    International Nuclear Information System (INIS)

    The present work aims at developing copper oxide nanocrystals immobilized onto the fabrics for the improvement of antimicrobial activity. The CuO nanocrytstals were deposited onto woven fabrics and non-woven fabrics through chemical precipitation route. The samples were characterized by XRD, Raman spectroscopy, FE-SEM, and TEM. The presence of CuO on the surface of the fabrics was confirmed by EDAX. The CuO nanoparticles were found to have grown to a size of 50 nm with a monoclinic structure. The antibacterial activities were assessed for the coated CuO samples by the agar diffusion plate method followed by FE-SEM. To promote the slow release of Cu ions into the medium from the fabric matrix, the synthesized nanoparticles were immobilized in polyaniline polymer matrix before being coated onto the fabric samples, and the results are discussed.Graphical Abstract

  14. Functionalization of fabrics with PANI/CuO nanoparticles by precipitation route for anti-bacterial applications

    Energy Technology Data Exchange (ETDEWEB)

    Thampi, V. V. Anusha; Thanka Rajan, S.; Anupriya, K.; Subramanian, B., E-mail: subramanianb3@gmail.com, E-mail: bsmanian@cecri.res.in [CSIR-Central Electrochemical Research Institute (India)

    2015-01-15

    The present work aims at developing copper oxide nanocrystals immobilized onto the fabrics for the improvement of antimicrobial activity. The CuO nanocrytstals were deposited onto woven fabrics and non-woven fabrics through chemical precipitation route. The samples were characterized by XRD, Raman spectroscopy, FE-SEM, and TEM. The presence of CuO on the surface of the fabrics was confirmed by EDAX. The CuO nanoparticles were found to have grown to a size of 50 nm with a monoclinic structure. The antibacterial activities were assessed for the coated CuO samples by the agar diffusion plate method followed by FE-SEM. To promote the slow release of Cu ions into the medium from the fabric matrix, the synthesized nanoparticles were immobilized in polyaniline polymer matrix before being coated onto the fabric samples, and the results are discussed.Graphical Abstract.

  15. Conjugative DNA Transfer Induces the Bacterial SOS Response and Promotes Antibiotic Resistance Development through Integron Activation

    OpenAIRE

    Baharoglu, Zeynep; Bikard, David; Mazel, Didier

    2010-01-01

    Conjugation is one mechanism for intra- and inter-species horizontal gene transfer among bacteria. Conjugative elements have been instrumental in many bacterial species to face the threat of antibiotics, by allowing them to evolve and adapt to these hostile conditions. Conjugative plasmids are transferred to plasmidless recipient cells as single-stranded DNA. We used lacZ and gfp fusions to address whether conjugation induces the SOS response and the integron integrase. The SOS response contr...

  16. Preferential Au precipitation at deformation-induced defects in Fe–Au and Fe–Au–B–N alloys

    International Nuclear Information System (INIS)

    Highlights: • Fe–Au–B–N forms a good model alloy system for self healing of deformation damage. • Solute Au atoms exclusively precipitate at grain boundaries, cracks and cavities. • XPS indicates a strong tendency for Au segregation on free surfaces at 550 °C. • Interstitial B and N form hexagonal BN on free surfaces at 550 °C. • Selective Au precipitation at open volume defects can cause autonomous repair. -- Abstract: The influence of deformation-induced defects on the isothermal precipitation of Au was studied in high-purity Fe–Au and Fe–Au–B–N alloys. Preferential Au precipitation upon annealing at 550 °C is observed at local plastic indentations. In fractured Fe–Au–B–N, solute Au atoms were found to heterogeneously precipitate at grain boundaries and local micro-cracks. This is supported by in-situ creep tests that showed a strong tendency for Au precipitation at cracks and cavities also formed during creep loading at 550 °C. Complementary X-ray photoelectron spectroscopy experiments indicate a strong tendency of Au, B and N segregation onto free surface during aging. The observed site-specific precipitation of Au holds interesting opportunities for defect healing in steels subjected to creep deformation

  17. MODELING OF STRAIN-INDUCED PRECIPITATION KINETICS IN Nb MICROALLOYED STEELS

    Institute of Scientific and Technical Information of China (English)

    X.G. Zhou; Z.Y. Liu; D. Wu; Z.Li; C.M. Li

    2006-01-01

    On the basis of the thermodynamic calculation of precipitation and considering the effect of strain on the precipitation behavior and chemical composition (Si and Mn), the kinetics of precipitation from austenite has been investigated for different temperatures and strains. Nucleation theory and the solubility product of niobium, carbon, and nitrogen in austenite have been used to derive equations for the start time of precipitation as a function of temperature and composition. The value of n in Avrami equation was determined using the available experimental data from the published reports, which indicated that n is a constant independent of temperature and the end time of precipitation is a function of n and the start time of precipitation. The values of the start time and end time of precipitation predicted by the new model are compared with the experimental values and a good agreement was obtained between both.

  18. Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals.

    Directory of Open Access Journals (Sweden)

    Kathleen M Morrow

    Full Text Available Benthic macroalgae can be abundant on present-day coral reefs, especially where rates of herbivory are low and/or dissolved nutrients are high. This study investigated the impact of macroalgal extracts on both coral-associated bacterial assemblages and sublethal stress response of corals. Crude extracts and live algal thalli from common Caribbean macroalgae were applied onto the surface of Montastraea faveolata and Porites astreoides corals on reefs in both Florida and Belize. Denaturing gradient gel electrophoresis (DGGE of 16S rRNA gene amplicons was used to examine changes in the surface mucus layer (SML bacteria in both coral species. Some of the extracts and live algae induced detectable shifts in coral-associated bacterial assemblages. However, one aqueous extract caused the bacterial assemblages to shift to an entirely new state (Lobophora variegata, whereas other organic extracts had little to no impact (e.g. Dictyota sp.. Macroalgal extracts more frequently induced sublethal stress responses in M. faveolata than in P. astreoides corals, suggesting that cellular integrity can be negatively impacted in selected corals when comparing co-occurring species. As modern reefs experience phase-shifts to a higher abundance of macroalgae with potent chemical defenses, these macroalgae are likely impacting the composition of microbial assemblages associated with corals and affecting overall reef health in unpredicted and unprecedented ways.

  19. Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals.

    Science.gov (United States)

    Morrow, Kathleen M; Ritson-Williams, Raphael; Ross, Cliff; Liles, Mark R; Paul, Valerie J

    2012-01-01

    Benthic macroalgae can be abundant on present-day coral reefs, especially where rates of herbivory are low and/or dissolved nutrients are high. This study investigated the impact of macroalgal extracts on both coral-associated bacterial assemblages and sublethal stress response of corals. Crude extracts and live algal thalli from common Caribbean macroalgae were applied onto the surface of Montastraea faveolata and Porites astreoides corals on reefs in both Florida and Belize. Denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene amplicons was used to examine changes in the surface mucus layer (SML) bacteria in both coral species. Some of the extracts and live algae induced detectable shifts in coral-associated bacterial assemblages. However, one aqueous extract caused the bacterial assemblages to shift to an entirely new state (Lobophora variegata), whereas other organic extracts had little to no impact (e.g. Dictyota sp.). Macroalgal extracts more frequently induced sublethal stress responses in M. faveolata than in P. astreoides corals, suggesting that cellular integrity can be negatively impacted in selected corals when comparing co-occurring species. As modern reefs experience phase-shifts to a higher abundance of macroalgae with potent chemical defenses, these macroalgae are likely impacting the composition of microbial assemblages associated with corals and affecting overall reef health in unpredicted and unprecedented ways. PMID:23028648

  20. Conjugative DNA transfer induces the bacterial SOS response and promotes antibiotic resistance development through integron activation.

    Directory of Open Access Journals (Sweden)

    Zeynep Baharoglu

    2010-10-01

    Full Text Available Conjugation is one mechanism for intra- and inter-species horizontal gene transfer among bacteria. Conjugative elements have been instrumental in many bacterial species to face the threat of antibiotics, by allowing them to evolve and adapt to these hostile conditions. Conjugative plasmids are transferred to plasmidless recipient cells as single-stranded DNA. We used lacZ and gfp fusions to address whether conjugation induces the SOS response and the integron integrase. The SOS response controls a series of genes responsible for DNA damage repair, which can lead to recombination and mutagenesis. In this manuscript, we show that conjugative transfer of ssDNA induces the bacterial SOS stress response, unless an anti-SOS factor is present to alleviate this response. We also show that integron integrases are up-regulated during this process, resulting in increased cassette rearrangements. Moreover, the data we obtained using broad and narrow host range plasmids strongly suggests that plasmid transfer, even abortive, can trigger chromosomal gene rearrangements and transcriptional switches in the recipient cell. Our results highlight the importance of environments concentrating disparate bacterial communities as reactors for extensive genetic adaptation of bacteria.

  1. Detrimental effect of the proteasome inhibitor, bortezomib in bacterial superantigen- and lipopolysaccharide-induced systemic inflammation.

    Science.gov (United States)

    Tilahun, Ashenafi Y; Theuer, Jayne E; Patel, Robin; David, Chella S; Rajagopalan, Govindarajan

    2010-06-01

    Bacterial superantigen (BSAg)-induced toxic shock syndrome (TSS) and bacterial lipopolysaccharide (LPS)-induced shock are characterized by severe systemic inflammation. As nuclear factor kappaB (NF kappaB) plays an important role in inflammation and bortezomib, a proteasome inhibitor widely used in cancer chemotherapy, is a potent inhibitor of NF kappaB activation, we evaluated the therapeutic and prophylactic use of bortezomib in these conditions using murine models. Bortezomib prophylaxis significantly reduced serum levels of many cytokines and chemokines induced by BSAg. However, at 3 hours, serum level of TNF-a, an important cytokine implicated in TSS, was significantly reduced but not abolished. At 6 hours, there was no difference in the serum TNF-a levels between bortezomib treated and untreated mice challenged with staphylococcal enterotoxin B (SEB). Paradoxically, all mice treated with bortezomib either before or after BSAg challenge succumbed to TSS. Neither bortezomib nor BSAg was lethal if given alone. Serum biochemical parameters and histopathological findings suggested acute liver failure as the possible cause of mortality. Liver tissue from SEB-challenged mice treated with bortezomib showed a significant reduction in NF kappaB activation. Because NF kappaB-dependent antiapoptotic pathways protect hepatocytes from TNF-alpha-induced cell death, inhibition of NF kappaB brought forth by bortezomib in the face of elevated TNF-alpha levels caused by BSAg or LPS is detrimental. PMID:20372109

  2. Bacterial lipoprotein-induced tolerance is reversed by overexpression of IRAK-1.

    LENUS (Irish Health Repository)

    Li, Chong Hui

    2012-03-01

    Tolerance to bacterial cell wall components including bacterial lipoprotein (BLP) represents an essential regulatory mechanism during bacterial infection. Reduced Toll-like receptor 2 (TLR2) and IL-1 receptor-associated kinase 1 (IRAK-1) expression is a characteristic of the downregulated TLR signaling pathway observed in BLP-tolerised cells. In this study, we attempted to clarify whether TLR2 and\\/or IRAK-1 are the key molecules responsible for BLP-induced tolerance. Transfection of HEK293 cells and THP-1 cells with the plasmid encoding TLR2 affected neither BLP tolerisation-induced NF-κB deactivation nor BLP tolerisation-attenuated pro-inflammatory cytokine tumor necrosis factor alpha (TNF-α) production, indicating that BLP tolerance develops despite overexpression of TLR2 in these cells. In contrast, overexpression of IRAK-1 reversed BLP-induced tolerance, as transfection of IRAK-1 expressing vector resulted in a dose-dependent NF-κB activation and TNF-α release in BLP-tolerised cells. Furthermore, BLP-tolerised cells exhibited markedly repressed NF-κB p65 phosphorylation and impaired binding of p65 to several pro-inflammatory cytokine gene promoters including TNF-α and interleukin-6 (IL-6). Overexpression of IRAK-1 restored the nuclear transactivation of p65 at both TNF-α and IL-6 promoters. These results indicate a crucial role for IRAK-1 in BLP-induced tolerance, and suggest IRAK-1 as a potential target for manipulation of the TLR-mediated inflammatory response during microbial sepsis.

  3. Selective nucleation induced by defect nanostructures: A way to control cobalt disilicide precipitation during ion implantation

    Science.gov (United States)

    Fortuna, F.; Nguyen, M.-A.; Ruault, M.-O.; Kirk, M. A.; Borodin, V. A.; Ganchenkova, M. G.

    2012-12-01

    In this paper, we show a way to control cobalt disilicide precipitation during Co ion implantation at high temperatures (650 °C) by affecting radiation defects involved in precipitate nucleation and growth. We demonstrate that the relative shares of different precipitate types nucleated by implantation are strongly affected by defect microstructures deliberately created in investigated samples prior to cobalt implantation. Especially interesting is the effect of a dense ensemble of extremely small (1-3 nm) cavities, which promotes the formation of a relatively uniform layer of coherent cobalt disilicide precipitates with a narrow size distribution. In order to better understand the mechanism of the microstructural influence on the precipitate nucleation modes during Co implantation, we investigate the disilicide precipitation using different implantation setups and compare the results with those for cavity-free Si specimens implanted in similar conditions.

  4. Selective nucleation induced by defect nanostructures: A way to control cobalt disilicide precipitation during ion implantation

    International Nuclear Information System (INIS)

    In this paper, we show a way to control cobalt disilicide precipitation during Co ion implantation at high temperatures (650 °C) by affecting radiation defects involved in precipitate nucleation and growth. We demonstrate that the relative shares of different precipitate types nucleated by implantation are strongly affected by defect microstructures deliberately created in investigated samples prior to cobalt implantation. Especially interesting is the effect of a dense ensemble of extremely small (1-3 nm) cavities, which promotes the formation of a relatively uniform layer of coherent cobalt disilicide precipitates with a narrow size distribution. In order to better understand the mechanism of the microstructural influence on the precipitate nucleation modes during Co implantation, we investigate the disilicide precipitation using different implantation setups and compare the results with those for cavity-free Si specimens implanted in similar conditions.

  5. Selective nucleation induced by defect nanostructures: A way to control cobalt disilicide precipitation during ion implantation

    Energy Technology Data Exchange (ETDEWEB)

    Fortuna, F.; Nguyen, M.-A.; Ruault, M.-O. [CSNSM, batiment 108, 91405 Orsay Campus (France); Kirk, M. A. [Materials Science Division, Argonne National Laboratory, Argonne, Illinois 60439 (United States); Borodin, V. A. [NRC ' Kurchatov Institute,' 123182 Moscow (Russian Federation); Ganchenkova, M. G. [NRNU MEPhI, 115409 Moscow (Russian Federation)

    2012-12-15

    In this paper, we show a way to control cobalt disilicide precipitation during Co ion implantation at high temperatures (650 Degree-Sign C) by affecting radiation defects involved in precipitate nucleation and growth. We demonstrate that the relative shares of different precipitate types nucleated by implantation are strongly affected by defect microstructures deliberately created in investigated samples prior to cobalt implantation. Especially interesting is the effect of a dense ensemble of extremely small (1-3 nm) cavities, which promotes the formation of a relatively uniform layer of coherent cobalt disilicide precipitates with a narrow size distribution. In order to better understand the mechanism of the microstructural influence on the precipitate nucleation modes during Co implantation, we investigate the disilicide precipitation using different implantation setups and compare the results with those for cavity-free Si specimens implanted in similar conditions.

  6. Are grazer-induced adaptations of bacterial abundance and morphology timedependent?

    Directory of Open Access Journals (Sweden)

    Gianluca CORNO

    2006-02-01

    Full Text Available Predation by protists is a well known force that shapes bacterial communities and can lead to filamentous forms and aggregations of large cell clusters. These classic resistance strategies were observed as a direct consequence of predation by heteroand mixotrophic flagellates (the main group of bacteria predators in water on natural assemblages of bacteria and on single plastic strains. Recently it was shown that a long time exposure (about 30 days of a bacterial strain, characterized by high degree of phenotypic plasticity, to flagellates, without direct predation, enhanced the formation of resistant forms (filaments in a continuous culture system. Target prey populations and predators were separated by a dialysis membrane. Moreover, the positive impact on bacterial growth, due to the chemical excretes released by flagellates was demonstrated for exudates of photosynthetic activity. The same positive impact may also be seen in response to exudates related to grazing. In this study, two short-term experiments (<100 hours were conducted to test for modifications in the morphology and productivity of three different bacterial strains that were induced by the presence of active predators, but without direct predation. The growth and morphological distribution of each of the selected strains was tested separately using batch cultures. Cultures were either enriched with carbon in the presence or absence of flagellate predators, or included pre-filtered exudates from flagellate activity. In a second experiment, bottles were provided with a central dialysis bag that contained active flagellates, and were inoculated with the selected bacterial strains. In this way, bacteria were exposed to the presence of predators without direct predation. The bacterial strains used in this experience were characterised by a high degree of phenotypic plasticity and exhibited different successful strategies of resistance against grazing. The flagellates selected as

  7. Precipitate-induced R-phase in martensitic transformation of as-spun and annealed Ti51Ni49 ribbons

    International Nuclear Information System (INIS)

    Differential scanning calorimetry (DSC) results indicate that a two-step B2 → R → B19' martensitic transformation and a one-step B19' → B2 transformation exhibit in as-spun and in 200-600 oC annealed Ti51Ni49 ribbons. Guinier-Preston (GP) zones and Ti2Ni precipitates are formed in ribbons annealed at ≤300 oC and ≥400 oC, respectively, and a conspicuous increase of DSC transformation peak temperature occurs in between 300 oC and 400 oC. The sizes of GP zones and Ti2Ni precipitates increase with increased annealing temperature. Transmission electron microscope (TEM) observations show that GP zones can induce the R-phase and both of them are formed along B2 directions. DSC and TEM tests show that Ti2Ni precipitates can induce the R-phase more than GP zones and the induced R-phase plates are also found along B2 directions. Experimental results show that the growing direction of R-phase plates is strongly confined by that of GP zones and Ti2Ni precipitates. The length of R-phase plates can reach about 2 μm in 300 oC annealed ribbon.

  8. The time series variations of tritium concentration in precipitation and its relationships to the rainfall-inducing air mass

    International Nuclear Information System (INIS)

    The author measured the tritium concentration in precipitation of Tokyo for every ten-day period from August 1972 to May 1974. Judging from the daily synoptic weather chart, the rainfall-inducing air masses in Japan were classified into five types; polar maritime air mass (Pm), polar continental air mass (Pc), tropical maritime air mass (Tm), tropical continental air mass (Tc), and equatorial maritime air mass (Em). And the precipitation for every ten-day period sampled for tritium measurement were classified into these five types. Based on this classification, it is confirmed that there exist clear difference in the tritium concentration between the rainfall from the continental air mass and ones from the maritime air mass. It is characteristic that the tritium concentration in rainfall induced by equatorial maritime air mass such as typhoon in summer and early fall season is very low whereas the tritium concentration in rainfall and snowfall induced directly by the polar continental air mass in late winter season is very high. The regional difference of the tritium concentration in intermonthly precipitation could considerably be explained by this synoptic meteological classification of rainfall-inducing air mass. In spite of these regional difference of tritium concentration in precipitation, use of the tritium concentration of Tokyo as a representative value of Japan may be allowed because of the similarities of the changing pattern and annual mean tritium concentration. The time series variations of tritium concentration in precipitation of Tokyo from August 1972 to December 1977, Tsukuba from December 1976 to April 1978, and Nagaoka from April 1977 to March 1978 are listed. (author)

  9. Radiation-induced instability of MnS precipitates and its possible consequences on irradiation-induced stress corrosion cracking of austenitic stainless steels

    International Nuclear Information System (INIS)

    Irradiation-assisted stress corrosion cracking (IASCC) is a significant materials issue for the light water reactor (LWR) industry and may also pose a problem for fusion power reactors that will use water as coolant. A new metallurgical process is proposed that involves the radiation-induced release into solution of minor impurity elements not usually thought to participate in IASCC. MnS-type precipitates, which contain most of the sulfur in stainless steels, are thought to be unstable under irradiation. First, Mn transmutes strongly to Fe in thermalized neutron spectra. Second, cascade-induced disordering and the inverse Kirkendall effect operating at the incoherent interfaces of MnS precipitates are thought to act as a pump to export Mn from the precipitate into the alloy matrix. Both of these processes will most likely allow sulfur, which is known to exert a deleterious influence on intergranular cracking, to re-enter the matrix. To test this hypothesis, compositions of MnS-type precipitates contained in several unirradiated and irradiated heats of Type 304, 316, and 348 stainless steels (SSs) were analyzed by Auger electron spectroscopy. Evidence is presented that shows a progressive compositional modification of MnS precipitates as exposure to neutrons increases in boiling water reactors. As the fluence increases, the Mn level in MnS decreases, whereas the Fe level increases. The S level also decreases relative to the combined level of Mn and Fe. MnS precipitates were also found to be a reservoir of other deleterious impurities such as F and O which could be also released due to radiation-induced instability of the precipitates

  10. Immune responses and protection induced by Brucella suis S2 bacterial ghosts in mice.

    Science.gov (United States)

    Liu, Jun; Li, Yi; Sun, Yang; Ji, Xue; Zhu, Lingwei; Guo, Xuejun; Zhou, Wei; Zhou, Bo; Liu, Shuang; Zhang, Ruian; Feng, Shuzhang

    2015-08-15

    With the purpose of generating Brucella suis bacterial ghosts and investigating the immunogenicity of bacterial ghosts as a vaccine candidate, the lysis gene E and temperature-sensitive regulator cassette were cloned into a shuttle plasmid, pBBR1MCS-2, for construction of a recombinant temperature-sensitive shuttle lysis plasmid, pBBR1MCS-E. pBBR1MCS-E was then introduced into attenuated B. suis live vaccine S2 bacteria, and the resultant transformants were used for production of B. suis ghosts (BSGs) by inducing lysis gene E expression. The BSGs were characterized by observing their morphology by transmission electron microscopy. The safety and immunogenicity of BSGs were further evaluated using a murine model, the result suggested that BSG was as safe as formalin-killed B. suis. In mice, BSG demonstrated a similar capacity of inducing pathogen-specific serum IgG antibody response, spleen CD3(+) and CD4(+) T cell responses, induce secretion of gamma interferon and interleukin-4, and protection levels against Brucella melitensis 16M challenge, as the attenuated B. suis live vaccine. These data suggesting that BSG could confer protection against Brucella infection in a mouse model of disease and may be developed as a new vaccine candidate against Brucella infection. PMID:26022514

  11. Ischemic stroke induces gut permeability and enhances bacterial translocation leading to sepsis in aged mice

    Science.gov (United States)

    Verma, Rajkumar; Venna, Venugopal R.; Liu, Fudong; Chauhan, Anjali; Koellhoffer, Edward; Patel, Anita; Ricker, Austin; Maas, Kendra; Graf, Joerg; McCullough, Louise D.

    2016-01-01

    Aging is an important risk factor for post-stroke infection, which accounts for a large proportion of stroke-associated mortality. Despite this, studies evaluating post-stroke infection rates in aged animal models are limited. In addition, few studies have assessed gut microbes as a potential source of infection following stroke. Therefore we investigated the effects of age and the role of bacterial translocation from the gut in post-stroke infection in young (8-12 weeks) and aged (18-20 months) C57Bl/6 male mice following transient middle cerebral artery occlusion (MCAO) or sham surgery. Gut permeability was examined and peripheral organs were assessed for the presence of gut-derived bacteria following stroke. Furthermore, sickness parameters and components of innate and adaptive immunity were examined. We found that while stroke induced gut permeability and bacterial translocation in both young and aged mice, only young mice were able to resolve infection. Bacterial species seeding peripheral organs also differed between young (Escherichia) and aged (Enterobacter) mice. Consequently, aged mice developed a septic response marked by persistent and exacerbated hypothermia, weight loss, and immune dysfunction compared to young mice following stroke. PMID:27115295

  12. Antibiotic-induced change of bacterial communities associated with the copepod Nitocra spinipes.

    Directory of Open Access Journals (Sweden)

    Anna Edlund

    Full Text Available Environmental pressures, such as physical factors, diet and contaminants may affect interactions between microbial symbionts and their multicellular hosts. Despite obvious relevance, effects of antimicrobial contaminants on host-symbiont relations in non-target aquatic organisms are largely unknown. We show that exposure to antibiotics had negative effects on survival and juvenile development of the copepod Nitocra spinipes and caused significant alterations in copepod-associated bacterial communities. The significant positive correlations between indices of copepod development and bacterial diversity indicate that disruption of the microflora was likely to be an important factor behind retarded juvenile development in the experimental animals. Moreover, as evidenced by ribotype distribution in the bacterial clone libraries, the exposure to antibiotics caused a shift in dominance from Betaproteobacteria to Cardinium bacteria; the latter have been shown to cause reproductive manipulations in various terrestrial arthropods. Thus, in addition to providing evidence that the antibiotic-induced perturbation of the microbial community associates with reductions in fitness-related traits of the host, this study is the first record of a copepod serving as a host for endosymbiotic Cardinium. Taken together, our results suggest that (1 antimicrobial substances and possibly other stressors can affect micobiome and symbiont-mediated interactions in copepods and other hosts, and (2 Cardinium endosymbionts may occur in other copepods and affect reproduction of their hosts.

  13. FORWARD AND INVERSE BIO-GEOCHEMICAL MODELING OF MICROBIALLY INDUCED PRECIPITATION IN 0.5M COLUMNAR EXPERIMENTS

    Science.gov (United States)

    Barkouki, T. H.; Martinez, B.; Mortensen, B.; Dejong, J.; Weathers, T. S.; Spycher, N.; Ginn, T. R.; Fujita, Y.; Smith, R. W.

    2009-12-01

    Subsurface contamination by metals and radionuclides threatens water supplies and ecosystem health at sites worldwide. One potential solution is immobilization in calcite where mineral precipitation is induced in situ by microbially-mediated ureolysis. Specifically, immobile aerobic biophases (cells or enzymes) mediate the conversion of urea to ammonium and carbonate, raising pH and promoting calcite precipitation. Divalent species such as strontium (including 90Sr, a common radionuclide contaminant) can co-precipitate, resulting in in situ immobilization. In waters that are saturated with respect to calcite, this represents a long-term sequestration mechanism. Calcite precipitation also enables control of mechanical properties of the medium through the cementation of particles thus increasing the shear strength and stiffness, while decreasing the permeability and compressibility. Challenges in application include design of the injectate aqueous chemistry (e.g., calcium, carbonate, urea, pH buffer, microbial nutrients) and selection of injection rates in order to control the timing and rate of calcite precipitation to generate the desired spatial distribution. Modeling ultimately requires incorporation of comprehensive reaction networks into transport simulators for non-uniform flow. To develop and validate the reaction network for use in both contaminant co-precipitation and subsurface structural modification applications, multicomponent biogeochemical modeling (TOUGHREACT v2) was applied in analyses of laboratory batch and column investigations of microbially-mediated calcite precipitation using Sporosarcina pasteurii. Column experiments included continuous and repeat pulse-flows, with cumulative flux equal in both cases. Aqueous chemistry and calcite distribution were monitored, as well as seismic shear waves that correlate to the stiffness of the column and thus to precipitation extent. TOUGHREACT was coupled with the inversion code UCODE to invert on observed

  14. Effects of exogenous cholecystokinin octapeptide on acquisition of naloxone precipitated withdrawal induced conditioned place aversion in rats.

    Directory of Open Access Journals (Sweden)

    Hailei Yu

    Full Text Available Cholecystokinin octapeptide (CCK-8, a gut-brain peptide, regulates a variety of physiological behavioral processes. Previously, we reported that exogenous CCK-8 attenuated morphine-induced conditioned place preference, but the possible effects of CCK-8 on aversively motivated drug seeking remained unclear. To investigate the effects of endogenous and exogenous CCK on negative components of morphine withdrawal, we evaluated the effects of CCK receptor antagonists and CCK-8 on the naloxone-precipitated withdrawal-induced conditioned place aversion (CPA. The results showed that CCK2 receptor antagonist (LY-288,513, 10 µg, i.c.v., but not CCK1 receptor antagonist (L-364,718, 10 µg, i.c.v., inhibited the acquisition of CPA when given prior to naloxone (0.3 mg/kg administration in morphine-dependent rats. Similarly, CCK-8 (0.1-1 µg, i.c.v. significantly attenuated naloxone-precipitated withdrawal-induced CPA, and this inhibitory function was blocked by co-injection with L-364,718. Microinjection of L-364,718, LY-288,513 or CCK-8 to saline pretreated rats produced neither a conditioned preference nor aversion, and the induction of CPA by CCK-8 itself after morphine pretreatments was not significant. Our study identifies a different role of CCK1 and CCK2 receptors in negative affective components of morphine abstinence and an inhibitory effect of exogenous CCK-8 on naloxone-precipitated withdrawal-induced CPA via CCK1 receptor.

  15. Radiation-induced instability of MnS precipitates and its possible consequences on IASCC of austenitic stainless steels

    Energy Technology Data Exchange (ETDEWEB)

    Chung, H.M. [Argonne National Lab., IL (United States); Garner, F.A. [Pacific Northwest National Lab., Richland, WA (United States)

    1996-10-01

    Irradiation assisted stress corrosion cracking (IASCC) continues to be a significant materials issue for the light water reactor industry and may also pose a problem for fusion power devices that employ water cooling. Although a number of potential mechanisms have been proposed to participate in this phenomenon, at this time it is not clear that any of these candidate mechanisms are sufficient to rationalize the observed failures. A new mechanism is proposed in this paper that involves the radiation-induced release into solution of elements not usually thought to participate in IASCC. It is shown in this paper that MnS precipitates, which contain most of the sulphur in stainless steels, are probably unstable under irradiation. First, the Mn transmutes very strongly to Fe in highly thermalized neutron spectra. Second, the combination of cascade-induced disordering and the inverse-Kirkendall effect operating at the incoherent interfaces of MnS precipitates will probably act as a pump to export Mn from the precipitate surface into the alloy matrix. Both of these processes will most likely allow some of the sulphur to re-enter the alloy matrix. Sulphur is known to exert a deleterious influence on grain boundary cracking. MnS precipitates are also thought to be a reservoir of other deleterious impurities such as fluorine which could be also released due to radiation-induced instability of the precipitates. This possibility has been confirmed by Auger electron spectroscopy of Types 304, 316, and 348 stainless steel specimens sectioned from several BWR components irradiated up to 3.5x10{sup 21} n/cm{sup 2} (E > 1 MeV).

  16. Impurity effects on oxygen precipitation induced by MeV implants in Cz silicon

    Science.gov (United States)

    Rimini, E.; Raineri, V.; La Ferla, A.; Galvagno, G.; Franco, G.; Carnera, A.; Gasparotto, A.

    1995-12-01

    The heterogeneous precipitation of oxygen in Cz silicon wafers has been investigated for the following implanted ions: Al, C, Si, P, and As, after anneal in the 800-1200 °C temperature range. The amount of precipitated oxygen, as measured by secondary ion mass spectrometry, ranges from 7 × 10 13 (As implant) to 3 × 10 14 cm -2 (Al implant) after an anneal at 1000°C for 20 min. The residual damage, as detected by transmission electron microscopy, does not show a significant dependence on the amount of precipitated oxygen as demonstrated by the analysis of Cz and epitaxial silicon wafers. The results are explained in terms of the interstitial trapping by species like C and Al, that enhances the heterogeneous formation of Si xO y clusters. The subsequent growth of precipitates has been modelled for Al and C implants and for several annealing temperatures and times.

  17. Ambient sound in the ocean induced by heavy precipitation and the subsequent predictability of rainfall rate

    OpenAIRE

    McGlothin, Charles C.

    1991-01-01

    An experiment by the Naval Postgraduate School and the National Data Buoy Center was performed in the Gulf of Mexico to characterize the underwater sound generated by heavy precipitation and to determine if rainfall rates of heavy precipitation can be measured using underwater sound. During this stage of the experiment, twentytwo data sets were recorded with rainfall rates up to 340 mm/hr. For a given rainfall rate, it is found that sound levels from heavy convective precipitat...

  18. Weekly variability of precipitation induced by anthropogenic aerosols: A case study in Korea in summer 2004.

    Energy Technology Data Exchange (ETDEWEB)

    Bae, Soo Ya; Jeong, Jaein I.; Park, R.; Lim, Kyo-Sun; Hong, Song-You

    2016-01-06

    We examine the effect of anthropogenic aerosols on the weekly variability of precipitation in Korea in summer 2004 by using Weather Research and Forecasting (WRF) and Community Multiscale Air Quality (CMAQ) models. We con-duct two WRF simulations including a baseline simulation with empirically based cloud condensation nuclei (CCN) number concentrations and a sensitivity simulation with our implementation to account for the effect of aerosols on CCN number concentrations. The first simulation underestimates observed precipitation amounts, particularly in northeastern coastal areas of Korea, whereas the latter shows higher precipitation amounts that are in better agree-ment with the observations. In addition, the sensitivity model with the aerosol effects reproduces the observed weekly variability, particularly for precipitation frequency with a high R at 0.85, showing 20% increase of precipita-tion events during the weekend than those during weekdays. We find that the aerosol effect results in higher CCN number concentrations during the weekdays and a three-fold increase of the cloud water mixing ratio through en-hanced condensation. As a result, the amount of warm rain is generally suppressed because of the low auto-conversion process from cloud water to rain water under high aerosol conditions. The inefficient conversion, how-ever, leads to higher vertical development of clouds in the mid-atmosphere with stronger updrafts in the sensitivity model, which increases by 21% cold-phase hydrometeors including ice, snow, and graupel relative to the baseline model and ultimately results in higher precipitation amounts in summer.

  19. Quench-induced precipitates in Al–Si alloys: Calorimetric determination of solute content and characterisation of microstructure

    Energy Technology Data Exchange (ETDEWEB)

    Schumacher, Philipp, E-mail: philipp.schumacher@uni-rostock.de [University of Rostock, Faculty of Mechanical Engineering and Marine Technology, Chair of Materials Science, Albert-Einstein-Str. 2, 18051 Rostock (Germany); University of Rostock, Institute of Physics, Polymer Physics Group, Wismarsche Str. 43-45, 18051 Rostock (Germany); Pogatscher, Stefan, E-mail: stefan.pogatscher@mat.ethz.ch [ETH Zurich, Department of Materials, Laboratory of Metal Physics and Technology, Vladimir-Prelog-Weg 4, 8093 Zurich (Switzerland); Starink, Marco J., E-mail: m.j.starink@soton.ac.uk [University of Southampton, Engineering and the Environment, Highfield, SO17 1BJ Southampton (United Kingdom); Schick, Christoph, E-mail: christoph.schick@uni-rostock.de [University of Rostock, Institute of Physics, Polymer Physics Group, Wismarsche Str. 43-45, 18051 Rostock (Germany); Mohles, Volker, E-mail: mohles@imm.rwth-aachen.de [RWTH Aachen University, Institute of Physical Metallurgy and Metal Physics, Kopernikusstr. 14, 52056 Aachen (Germany); Milkereit, Benjamin, E-mail: benjamin.milkereit@uni-rostock.de [University of Rostock, Faculty of Mechanical Engineering and Marine Technology, Chair of Materials Science, Albert-Einstein-Str. 2, 18051 Rostock (Germany); University of Rostock, Institute of Physics, Polymer Physics Group, Wismarsche Str. 43-45, 18051 Rostock (Germany); University of Southampton, Engineering and the Environment, Highfield, SO17 1BJ Southampton (United Kingdom)

    2015-02-20

    Highlights: • A new DSC method gives access to the entire cooling rate range of physical interest. • Two precipitation reactions were identified during cooling of pure binary Al–Si. • A physical model for solute and precipitation fraction is presented and validated. • The model allows to control phase transformations by heat treatments. • This enables to produce and mechanically test targeted microstructures. - Abstract: The present study introduces an experimental approach to investigate mechanical properties of well-defined non-equilibrium states of Al–Si alloys during cooling from solution annealing. The precipitation behaviour of binary Al–Si alloys during the cooling process has been investigated in a wide cooling rate range (2–0.0001 K/s) with differential scanning calorimetry (DSC). To access the low cooling rate range close to equilibrium an indirect DSC measurement method is introduced. Based on the enthalpy change measured by DSC a physically-based model for the calculation of remaining solute Si amount as function of temperature and cooling rate is presented. Microstructural analyses via light optical microscopy, scanning electron microscopy, atom probe tomography and X-ray diffraction have been performed to evaluate the introduced model and for information on cooling rate dependent precipitate formation. It was found that quench-induced particles of different morphology are formed during cooling. Thermomechanical analyses on clearly distinct undercooled Al–Si states show that flow stress during cooling is dependent on temperature as well as cooling rate. The mechanical behaviour is therefore influenced by solute Si content and quench-induced precipitates.

  20. Irradiation-induced precipitation and solute segregation in alloys. Fourth annual progress report, February 1, 1981-March 31, 1982

    International Nuclear Information System (INIS)

    The studies of irradiation-induced solute segregation (IISS) and irradiation-induced precipitation (IIP) in Ni-Si and Pd-Fe alloys have been completed. Progress is reported for several other projects: irradiation damage in binary Pd-Cr, -Mn and -V alloys (15 at. %); IIP in Pd-Mo and Pd-W alloys; IIP in Pd-25 at. % Cr alloy; and irradiation damage effects in proton-bombarded metallic glasses (Ni-65 Zr, 40 Fe 40 Ni 14 P6B). 27 figures

  1. Role of acute-phase proteins in interleukin-1-induced nonspecific resistance to bacterial infections in mice.

    OpenAIRE

    Vogels, M.T.E.; L. Cantoni; Carelli, M.; Sironi, M; Ghezzi, P; van der Meer, J. W M

    1993-01-01

    Treatment with a single low dose (80 to 800 ng) of interleukin-1 (IL-1) 24 h before a lethal bacterial challenge of granulocytopenic and normal mice enhances nonspecific resistance. Since IL-1 induces secretion of acute-phase proteins, liver proteins which possess several detoxifying effects, we investigated the role of these proteins in the IL-1-induced protection. Inhibition of liver protein synthesis with D-galactosamine (GALN) completely inhibited the IL-1-induced synthesis of acute-phase...

  2. The inhibiting effect of dislocation helices on the stress-induced orientation of S' precipitates in Al–Cu–Mg alloy

    International Nuclear Information System (INIS)

    The phenomenon of restrained stress-induced preferential orientation of S′ precipitates is investigated using a single-crystal of Al–1.23Cu–0.43 Mg alloy. Al–1.23Cu–0.43 Mg single-crystal specimens are subjected to stress aging, and the microstructure is analyzed by transmission electron microscopy (TEM). It is found that the stress-induced preferential orientation of S′ precipitates is restrained owing to the dislocations produced by a higher stress. The effect of dislocations on the oriented precipitates depends on the total length of the intersection lines for precipitate habit planes and dislocation glide planes. This investigation not only provides important insight into solving the anisotropy problem attributed to precipitation strengthening, but also offers a benchmark for choosing the appropriate stress range in manufacturing of Al–Cu–Mg alloys. - Highlights: • Single crystals of an Al–Cu–Mg alloy were prepared for the investigations. • A phenomenon of restrained stress-induced preferential orientation of S′ precipitates was found. • The influence of dislocation helices on precipitation during stress-aging was studied. • Difference of orientation degree of S′ precipitates and θ′ precipitates was explained. • A basis for choosing the appropriate stress range in manufacturing of Al–Cu–Mg alloys is provided

  3. The inhibiting effect of dislocation helices on the stress-induced orientation of S' precipitates in Al–Cu–Mg alloy

    Energy Technology Data Exchange (ETDEWEB)

    Guo, Xiaobin [School of Materials Science and Engineering, Central South University, Changsha (China); Deng, Yunlai, E-mail: luckdeng@csu.edu.cn [School of Materials Science and Engineering, Central South University, Changsha (China); State Key Laboratory of High Performance and Complex Manufacturing, Central South University, Changsha (China); Zhang, Jin [State Key Laboratory of High Performance and Complex Manufacturing, Central South University, Changsha (China); Light Alloy Research Institute, Central South University, Changsha (China); Zhang, Xinming [School of Materials Science and Engineering, Central South University, Changsha (China); State Key Laboratory of High Performance and Complex Manufacturing, Central South University, Changsha (China)

    2015-09-15

    The phenomenon of restrained stress-induced preferential orientation of S′ precipitates is investigated using a single-crystal of Al–1.23Cu–0.43 Mg alloy. Al–1.23Cu–0.43 Mg single-crystal specimens are subjected to stress aging, and the microstructure is analyzed by transmission electron microscopy (TEM). It is found that the stress-induced preferential orientation of S′ precipitates is restrained owing to the dislocations produced by a higher stress. The effect of dislocations on the oriented precipitates depends on the total length of the intersection lines for precipitate habit planes and dislocation glide planes. This investigation not only provides important insight into solving the anisotropy problem attributed to precipitation strengthening, but also offers a benchmark for choosing the appropriate stress range in manufacturing of Al–Cu–Mg alloys. - Highlights: • Single crystals of an Al–Cu–Mg alloy were prepared for the investigations. • A phenomenon of restrained stress-induced preferential orientation of S′ precipitates was found. • The influence of dislocation helices on precipitation during stress-aging was studied. • Difference of orientation degree of S′ precipitates and θ′ precipitates was explained. • A basis for choosing the appropriate stress range in manufacturing of Al–Cu–Mg alloys is provided.

  4. Location and chemical composition of microbially induced phosphorus precipitates in anaerobic and aerobic granular sludge.

    Science.gov (United States)

    Mañas, A; Spérandio, M; Decker, F; Biscans, B

    2012-01-01

    This work focuses on combined scanning electron microscopy and energy dispersive X-ray analysis (SEM-EDX) applied to granular sludge used for biological treatment of high-strength wastewater effluents. Mineral precipitation is shown to occur in the core of microbial granules under different operating conditions. Three dairy wastewater effluents, from three different upflow anaerobic sludge blanket (UASB) reactors and two aerobic granular sequenced batch reactors (GSBR) were evaluated. The relationship between the solid phase precipitation and the chemical composition of the wastewater was investigated with PHREEQC software (calculation of saturation indexes). Results showed that pH, Ca:P ratios and biological reactions played a major role in controlling the biomineralization phenomena. Thermodynamics calculations can be used to foresee the nature of bio-precipitates, but the location of the mineral concretions will need further investigation as it is certainly due to local microbial activity. PMID:23393959

  5. Irradiation-induced instability of MnS precipitates and its possible contribution to IASCC in light water reactors

    International Nuclear Information System (INIS)

    Although a number of candidate mechanisms have been proposed to participate in the IASCC phenomenon, it is not clear at this time that all of the contributing mechanisms have been identified. A new mechanism was proposed by Garner and Greenwood as a potential contribution to IASCC that involves the radiation-induced release into solution of sulphur and other deleterious elements that are normally concentrated into MnS precipitates. The instability arises from the combined action of the transmutation of manganese to iron, cascade-induced mixing and the very strong action of the inverse Kirkendall effect. The latter mechanism acts as a pump to export manganese from the precipitate surface and to replace it primarily with iron, as well as smaller amounts of chromium, nickel and other lesser elements. Evidence previously presented by Chung and coworkers appears to show that MnS precipitates in typical 300 series stainless steels become progressively depleted in manganese and enriched with iron as irradiation proceeds in boiling water reactor neutron spectra. It is shown in this paper that transmutation alone is insufficient to produce the observed behavior

  6. Sympathetic activity induced by naloxone-precipitated morphine withdrawal is blocked in genetically engineered mice lacking functional CRF1 receptor

    International Nuclear Information System (INIS)

    There is large body evidence indicating that stress can lead to cardiovascular disease. However, the exact brain areas and the mechanisms involved remain to be revealed. Here, we performed a series of experiments to characterize the role of CRF1 receptor (CRF1R) in the stress response induced by naloxone-precipitated morphine withdrawal. The experiments were performed in the hypothalamic paraventricular nucleus (PVN) ventrolateral medulla (VLM), brain regions involved in the regulation of cardiovascular activity, and in the right ventricle by using genetically engineered mice lacking functional CRF1R levels (KO). Mice were treated with increasing doses of morphine and withdrawal was precipitated by naloxone administration. Noradrenaline (NA) turnover, c-Fos, expression, PKA and TH phosphorylated at serine 40, was evaluated by high-performance liquid chromatography (HPLC), immunohistochemistry and immunoblotting. Morphine withdrawal induced an enhancement of NA turnover in PVN in parallel with an increase in TH neurons expressing c-Fos in VLM in wild-type mice. In addition we have demonstrated an increase in NA turnover, TH phosphorylated at serine 40 and PKA levels in heart. The main finding of the present study was that NA turnover, TH positive neurons that express c-Fos, TH phosphorylated at serine 40 and PKA expression observed during morphine withdrawal were significantly inhibited in CRF1R KO mice. Our results demonstrate that CRF/CRF1R activation may contribute to the adaptive changes induced by naloxone-precipitated withdrawal in the heart and in the brain areas which modulate the cardiac sympathetic function and suggest that CRF/CRF1R pathways could be contributing to cardiovascular disease associated to opioid addiction. - Highlights: • Naloxone-precipitated morphine withdrawal increases sympathetic activity in the PVN and heart. • Co-localization of TH phosphorylated at serine 40/c-Fos in the VLM after morphine withdrawal • Naloxone-precipitated

  7. Sympathetic activity induced by naloxone-precipitated morphine withdrawal is blocked in genetically engineered mice lacking functional CRF1 receptor

    Energy Technology Data Exchange (ETDEWEB)

    García-Carmona, Juan-Antonio; Martínez-Laorden, Elena; Milanés, María-Victoria; Laorden, María-Luisa

    2015-02-15

    There is large body evidence indicating that stress can lead to cardiovascular disease. However, the exact brain areas and the mechanisms involved remain to be revealed. Here, we performed a series of experiments to characterize the role of CRF1 receptor (CRF1R) in the stress response induced by naloxone-precipitated morphine withdrawal. The experiments were performed in the hypothalamic paraventricular nucleus (PVN) ventrolateral medulla (VLM), brain regions involved in the regulation of cardiovascular activity, and in the right ventricle by using genetically engineered mice lacking functional CRF1R levels (KO). Mice were treated with increasing doses of morphine and withdrawal was precipitated by naloxone administration. Noradrenaline (NA) turnover, c-Fos, expression, PKA and TH phosphorylated at serine 40, was evaluated by high-performance liquid chromatography (HPLC), immunohistochemistry and immunoblotting. Morphine withdrawal induced an enhancement of NA turnover in PVN in parallel with an increase in TH neurons expressing c-Fos in VLM in wild-type mice. In addition we have demonstrated an increase in NA turnover, TH phosphorylated at serine 40 and PKA levels in heart. The main finding of the present study was that NA turnover, TH positive neurons that express c-Fos, TH phosphorylated at serine 40 and PKA expression observed during morphine withdrawal were significantly inhibited in CRF1R KO mice. Our results demonstrate that CRF/CRF1R activation may contribute to the adaptive changes induced by naloxone-precipitated withdrawal in the heart and in the brain areas which modulate the cardiac sympathetic function and suggest that CRF/CRF1R pathways could be contributing to cardiovascular disease associated to opioid addiction. - Highlights: • Naloxone-precipitated morphine withdrawal increases sympathetic activity in the PVN and heart. • Co-localization of TH phosphorylated at serine 40/c-Fos in the VLM after morphine withdrawal • Naloxone-precipitated

  8. Coronatine inhibits stomatal closure and delays hypersensitive response cell death induced by nonhost bacterial pathogens

    Directory of Open Access Journals (Sweden)

    Seonghee Lee

    2013-02-01

    Full Text Available Pseudomonas syringae is the most widespread bacterial pathogen in plants. Several strains of P. syringae produce a phytotoxin, coronatine (COR, which acts as a jasmonic acid mimic and inhibits plant defense responses and contributes to disease symptom development. In this study, we found that COR inhibits early defense responses during nonhost disease resistance. Stomatal closure induced by a nonhost pathogen, P. syringae pv. tabaci, was disrupted by COR in tomato epidermal peels. In addition, nonhost HR cell death triggered by P. syringae pv. tabaci on tomato was remarkably delayed when COR was supplemented along with P. syringae pv. tabaci inoculation. Using isochorismate synthase (ICS-silenced tomato plants and transcript profiles of genes in SA- and JA-related defense pathways, we show that COR suppresses SA-mediated defense during nonhost resistance.

  9. Self-Adjuvanting Bacterial Vectors Expressing Pre-Erythrocytic Antigens Induce Sterile Protection against Malaria

    Directory of Open Access Journals (Sweden)

    Elke eBergmann-Leitner

    2013-07-01

    Full Text Available Genetically inactivated, Gram-negative bacteria that express malaria vaccine candidates represent a promising novel self-adjuvanting vaccine approach. Antigens expressed on particulate bacterial carriers not only target directly to antigen-presenting cells but also provide a strong danger signal thus circumventing the requirement for potent extraneous adjuvants. E. coli expressing malarial antigens resulted in the induction of either Th1 or Th2 biased responses that were dependent on both antigen and sub-cellular localization. Some of these constructs induced higher quality humoral responses compared to recombinant protein and most importantly they were able to induce sterile protection against sporozoite challenge in a murine model of malaria. In light of these encouraging results, two major Plasmodium falciparum pre-erythrocytic malaria vaccine targets, the Cell-Traversal protein for Ookinetes and Sporozoites (CelTOS fused to the Maltose-binding protein in the periplasmic space and the Circumsporozoite Protein (CSP fused to the Outer membrane protein A in the outer membrane were expressed in a clinically relevant, attenuated Shigella strain (Shigella flexneri 2a. This type of live attenuated vector has previously undergone clinical investigations as a vaccine against shigellosis. Using this novel delivery platform for malaria, we find that vaccination with the whole organism represents an effective vaccination alternative that induces protective efficacy against sporozoite challenge. Shigella GeMI-Vax expressing malaria targets warrant further evaluation to determine their full potential as a dual disease, multivalent, self-adjuvanting vaccine system, against both shigellosis and malaria.

  10. Bacterial β-(1,3)-glucan prevents DSS-induced IBD by restoring the reduced population of regulatory T cells.

    Science.gov (United States)

    Lee, Kwang-Ho; Park, Min; Ji, Kon-Young; Lee, Hwa-Youn; Jang, Ji-Hun; Yoon, Il-Joo; Oh, Seung-Su; Kim, Su-Man; Jeong, Yun-Hwa; Yun, Chul-Ho; Kim, Mi-Kyoung; Lee, In-Young; Choi, Ha-Rim; Ko, Ki-sung; Kang, Hyung-Sik

    2014-10-01

    Bacterial β-(1,3)-glucan has more advantages in terms of cost, yield and efficiency than that derived from mushrooms, plants, yeasts and fungi. We have previously developed a novel and high-yield β-(1,3)-glucan produced by Agrobacterium sp. R259. This study aimed to elucidate the functional mechanism and therapeutic efficacy of bacterial β-(1,3)-glucan in dextran sulfate sodium (DSS)-induced inflammatory bowel disease (IBD).Mice were orally pretreated with bacterial β-(1,3)-glucan at daily doses of 2.5 or 5mg/kg for 2 weeks. After 6 days of DSS treatment, clinical assessment of IBD severity and expression of pro-inflammatory cytokines were evaluated. In vivo cell proliferation was examined by immunohistochemistry using Ki-67 and ER-TR7 antibodies. The frequency of regulatory T cells (Tregs) was analyzed by flow cytometry. Natural killer (NK) activity and IgA level were evaluated using NK cytotoxicity assay and ELISA.The deterioration of body weight gain, colonic architecture, disease score and histological score was recovered in DSS-induced IBD mice when pretreated with bacterial β-(1,3)-glucan. The recruitment of macrophages and the gene expression of proinflammatory cytokines, such as IL-1β, IL-6 and IL-17A/F, were markedly decreased in the colon of β-(1,3)-glucan-pretreated mice. β-(1,3)-Glucan induced the recovery of Tregs in terms of their frequency in DSS-induced IBD mice. Intriguingly, β-(1,3)-glucan reversed the functional defects of NK cells and excessive IgA production in DSS-induced IBD mice.We conclude that bacterial β-(1,3)-glucan prevented the progression of DSS-induced IBD by recovering the reduction of Tregs, functional defect of NK cells and excessive IgA production. PMID:25092569

  11. Sympathetic activity induced by naloxone-precipitated morphine withdrawal is blocked in genetically engineered mice lacking functional CRF1 receptor.

    Science.gov (United States)

    García-Carmona, Juan-Antonio; Martínez-Laorden, Elena; Milanés, María-Victoria; Laorden, María-Luisa

    2015-02-15

    There is large body evidence indicating that stress can lead to cardiovascular disease. However, the exact brain areas and the mechanisms involved remain to be revealed. Here, we performed a series of experiments to characterize the role of CRF1 receptor (CRF1R) in the stress response induced by naloxone-precipitated morphine withdrawal. The experiments were performed in the hypothalamic paraventricular nucleus (PVN) ventrolateral medulla (VLM), brain regions involved in the regulation of cardiovascular activity, and in the right ventricle by using genetically engineered mice lacking functional CRF1R levels (KO). Mice were treated with increasing doses of morphine and withdrawal was precipitated by naloxone administration. Noradrenaline (NA) turnover, c-Fos, expression, PKA and TH phosphorylated at serine 40, was evaluated by high-performance liquid chromatography (HPLC), immunohistochemistry and immunoblotting. Morphine withdrawal induced an enhancement of NA turnover in PVN in parallel with an increase in TH neurons expressing c-Fos in VLM in wild-type mice. In addition we have demonstrated an increase in NA turnover, TH phosphorylated at serine 40 and PKA levels in heart. The main finding of the present study was that NA turnover, TH positive neurons that express c-Fos, TH phosphorylated at serine 40 and PKA expression observed during morphine withdrawal were significantly inhibited in CRF1R KO mice. Our results demonstrate that CRF/CRF1R activation may contribute to the adaptive changes induced by naloxone-precipitated withdrawal in the heart and in the brain areas which modulate the cardiac sympathetic function and suggest that CRF/CRF1R pathways could be contributing to cardiovascular disease associated to opioid addiction. PMID:25582704

  12. Petrographic and geochemical evidence for the formation of primary, bacterially induced lacustrine dolomite: La Roda 'white earth' (Pliocene, Central Spain)

    Science.gov (United States)

    Garcia, Del; Cura, M.A.; Calvo, J.P.; Ordonez, S.; Jones, B.F.; Canaveras, J.C.

    2001-01-01

    Upper Pliocene dolomites ('white earth') from La Roda, Spain, offer a good opportunity to evaluate the process of dolomite formation in lakes. The relatively young nature of the deposits could allow a link between dolomites precipitated in modern lake systems and those present in older lacustrine formations. The La Roda Mg-carbonates (dolomite unit) occur as a 3??5- to 4-m- thick package of poorly indurated, white, massive dolomite beds with interbedded thin deposits of porous carbonate displaying root and desiccation traces as well as local lenticular gypsum moulds. The massive dolomite beds consist mainly of loosely packed 1- to 2-??m-sized aggregates of dolomite crystals exhibiting poorly developed faces, which usually results in a subrounded morphology of the crystals. Minute rhombs of dolomite are sparse within the aggregates. Both knobbly textures and clumps of spherical bodies covering the crystal surfaces indicate that bacteria were involved in the formation of the dolomites. In addition, aggregates of euhedral dolomite crystals are usually present in some more clayey (sepiolite) interbeds. The thin porous carbonate (mostly dolomite) beds exhibit both euhedral and subrounded, bacterially induced dolomite crystals. The carbonate is mainly Ca-dolomite (51-54 mol% CaCO3), showing a low degree of ordering (degree of ordering ranges from 0??27 to 0??48). Calcite is present as a subordinate mineral in some samples. Sr, Mn and Fe contents show very low correlation coefficients with Mg/Ca ratios, whereas SiO2 and K contents are highly correlated. ??18O- and ??13C-values in dolomites range from -3??07??? to 5??40??? PDB (mean = 0??06, ?? = 1??75) and from -6??34??? to -0??39??? PDB (mean = -3??55, ?? = 1??33) respectively. Samples containing significant amounts of both dolomite and calcite do not in general show significant enrichment or depletion in 18O and 13C between the two minerals. The correlation coefficient between ??18O and ??13C for dolomite is extremely

  13. Bacterial Infection of Fly Ovaries Reduces Egg Production and Induces Local Hemocyte Activation

    OpenAIRE

    Brandt, Stephanie M.; Schneider, David S.

    2007-01-01

    Morbidity, the state of being diseased, is an important aspect of pathogenesis that has gone relatively unstudied in fruit flies. Our interest is in characterizing how bacterial pathogenesis affects various physiologies of the fly. We chose to examine the fly ovary because we found bacterial infection had a striking effect on fly reproduction. We observed decreased egg laying after bacterial infection that correlated with increased bacterial virulence. We also found that bacteria colonized th...

  14. H2-induced copper and silver nanoparticle precipitation inside sol-gel silica optical fiber preforms

    OpenAIRE

    Chahadih, A.; El Hamzaoui, Hicham; Cristini-Robbe, Odile; Bigot, Laurent; Bernard, Remy; Kinowski, Christophe; Bouazaoui, Mohamed; Capoen, Bruno

    2012-01-01

    Ionic copper- or silver-doped dense silica rods have been prepared by sintering sol-gel porous silica xerogels doped with ionic precursors. The precipitation of Cu or Ag nanoparticles was achieved by heat treatment under hydrogen followed by annealing under air atmosphere. The surface plasmon resonance bands of copper and silver nanoparticles have been clearly observed in the absorption spectra. The spectral positions of these bands were found to depend slightly on the particle size, which co...

  15. Al precipitate evolution in epitaxial silicon layers induced by thermal oxidation

    Energy Technology Data Exchange (ETDEWEB)

    Rimini, E.; Galvagno, G.; La Ferla, A. [dell`Universita di Catania (Italy)] [and others

    1996-12-31

    Al, the fastest p-type diffuser in silicon, interacts strongly with oxygen, defects, and precipitates, with a detrimental effect on the electrical activity. Although, substrates with low oxygen content, such as epitaxial layers on FZ grown crystals, can be used, it is practically impossible to avoid oxidation steps and then the amount of oxygen that is introduced into the wafer depends on the oxidation temperature. The present work deals with the behaviour of Al implanted at high energies either in bare epitaxial Si or in pre-oxidized epitaxial Si with a 300 nm thick thermal oxide layer. The subsequent annealings were performed under oxygen or nitrogen atmosphere. The SIMS and the spreading resistance analyses indicate that even the oxygen present in the silicon substrates after the thermal oxidation at temperatures above 1000 {degrees}C causes the precipitation of Al at the depth of the damage peak. The effect has been quantitatively analysed by comparison with thermal processes in nitrogen atmosphere. For the Al implant through the oxide layer, the growth and dissolution of Al-O precipitates has been studied.

  16. The Convective and Orographically Induced Precipitation Study (COPS): The Scientific Strategy, the Field Phase, and Research Highlights

    Energy Technology Data Exchange (ETDEWEB)

    Wulfmeyer, Volker; Behrendt, Andreas; Kottmeir, Christoph; Corsmeier, Ulrich; Barthlott, Christian; Craig, George C.; Hagen, Martin; Althausen, Dietrich; Aoshima, Fumiko; Arpagaus, Marco; Bauer, Hans-Stefan; Bennett, Lindsay; Blyth, Alan; Brandau, Christine; Champollion, Cedric; Crewell, Susanne; Dick, Galina; di Girolamo, Paolo; Dorninger, Manfred; Dufournet, Yann; Eigenmann, Rafael; Engelmann, Ronny; Flamant, C.; Foken, Thomas; Gorgas, Theresa; Grzeschik, Matthias; Handwerker, Jan; Hauck, Christian; Holler, Hartmut; Junkermann, W.; Kalthoff, Norbert; Kiemle, Christoph; Klink, Stefan; Konig, Marianne; Krauss, Liane; Long, Charles N.; Madonna, Fabio; Mobbs, S.; Neininger, Bruno; Pal, Sandip; Peters, Gerhard; Pigeon, Gregoire; Richard, Evelyne; Rotach, Mathias W.; Russchenberg, Herman; Schwitalla, Thomas; Smith, Victoria; Steinacker, Reinhold; Trentman, Jorg; Turner, David D.; van Baelen, Joel; Vogt, Siegfried; Volkert, Hans; Weckwerth, Tammy; Wernli, Heini; Wieser, Andreas; Wirth, Martin

    2011-02-24

    Within the frame of the international field campaign COPS (Convective and Orographically-induced Precipitation Study), a large suite of state-of-the-art meteorological instrumentation was operated, partially combined for the first time. The COPS field phase was performed from 01 June - 31 August 2007 in a low-mountain area in southwestern Germany/eastern France covering the Vosges Mountains, the Rhine valley and the Black Forest Mountains. The collected data set covers the entire evolution of convective precipitation events in complex terrain from their initiation, to their development and mature phase up to their decay. 18 Intensive Operation Periods (IOPs) with 34 operation days and 8 additional Special Observation Periods (SOPs) were performed providing a comprehensive data set covering different forcing conditions. In this paper an overview of the COPS scientific strategy, the field phase, and its first accomplishments is given. Some highlights of the campaign are illustrated with several measurement examples. It is demonstrated that COPS provided new insight in key processes leading to convection initiation and to the modification of precipitation by orography, in the improvement of QPF by the assimilation of new observations, and in the performance of ensembles of convection permitting models in complex terrain.

  17. Pathogen-induced conditioning of the primary xylem vessels - a prerequisite for the formation of bacterial emboli by Pectobacterium atrosepticum.

    Science.gov (United States)

    Gorshkov, V Y; Daminova, A G; Mikshina, P V; Petrova, O E; Ageeva, M V; Salnikov, V V; Gorshkova, T A; Gogolev, Y V

    2016-07-01

    Representatives of Pectobacterium genus are some of the most harmful phytopathogens in the world. In the present study, we have elucidated novel aspects of plant-Pectobacterium atrosepticum interactions. This bacterium was recently demonstrated to form specific 'multicellular' structures - bacterial emboli in the xylem vessels of infected plants. In our work, we showed that the process of formation of these structures includes the pathogen-induced reactions of the plant. The colonisation of the plant by P. atrosepticum is coupled with the release of a pectic polysaccharide, rhamnogalacturonan I, into the vessel lumen from the plant cell wall. This polysaccharide gives rise to a gel that serves as a matrix for bacterial emboli. P. atrosepticum-caused infection involves an increase of reactive oxygen species (ROS) levels in the vessels, creating the conditions for the scission of polysaccharides and modification of plant cell wall composition. Both the release of rhamnogalacturonan I and the increase in ROS precede colonisation of the vessels by bacteria and occur only in the primary xylem vessels, the same as the subsequent formation of bacterial emboli. Since the appearance of rhamnogalacturonan I and increase in ROS levels do not hamper the bacterial cells and form a basis for the assembly of bacterial emboli, these reactions may be regarded as part of the susceptible response of the plant. Bacterial emboli thus represent the products of host-pathogen integration, since the formation of these structures requires the action of both partners. PMID:26992469

  18. A bacterial quorum-sensing precursor induces mortality in the marine coccolithophore, Emiliania huxleyi

    Directory of Open Access Journals (Sweden)

    Elizabeth L Harvey

    2016-02-01

    Full Text Available Interactions between phytoplankton and bacteria play a central role in mediating biogeochemical cycling and food web structure in the ocean. However, deciphering the chemical drivers of these interspecies interactions remains challenging. Here we report the isolation of 2-heptyl-4-quinolone (HHQ, released by Pseudoalteromonas piscicida, a marine gamma-proteobacteria previously reported to induce phytoplankton mortality through a hitherto unknown algicidal mechanism. HHQ functions as both an antibiotic and a bacterial signaling molecule in cell-cell communication in clinical infection models. Co-culture of the bloom-forming coccolithophore, Emiliania huxleyi with both live P. piscicida and cell-free filtrates caused a significant decrease in algal growth. Investigations of the P. piscicida exometabolome revealed HHQ, at nanomolar concentrations, induced mortality in three strains of E. huxleyi. Mortality of E. huxleyi in response to HHQ occurred slowly, implying static growth rather than a singular loss event (e.g. rapid cell lysis. In contrast, the marine chlorophyte, Dunaliella tertiolecta and diatom, Phaeodactylum tricornutum were unaffected by HHQ exposures. These results suggest that HHQ mediates the type of interkingdom interactions that cause shifts in phytoplankton population dynamics. These chemically mediated interactions, and other like it, ultimately influence large-scale oceanographic processes.

  19. Modeling investigation of the stability and irradiation-induced evolution of nanoscale precipitates in advanced structural materials

    Energy Technology Data Exchange (ETDEWEB)

    Wirth, Brian [Univ. of Tennessee, Knoxville, TN (United States)

    2015-04-08

    Materials used in extremely hostile environment such as nuclear reactors are subject to a high flux of neutron irradiation, and thus vast concentrations of vacancy and interstitial point defects are produced because of collisions of energetic neutrons with host lattice atoms. The fate of these defects depends on various reaction mechanisms which occur immediately following the displacement cascade evolution and during the longer-time kinetically dominated evolution such as annihilation, recombination, clustering or trapping at sinks of vacancies, interstitials and their clusters. The long-range diffusional transport and evolution of point defects and self-defect clusters drive a microstructural and microchemical evolution that are known to produce degradation of mechanical properties including the creep rate, yield strength, ductility, or fracture toughness, and correspondingly affect material serviceability and lifetimes in nuclear applications. Therefore, a detailed understanding of microstructural evolution in materials at different time and length scales is of significant importance. The primary objective of this work is to utilize a hierarchical computational modeling approach i) to evaluate the potential for nanoscale precipitates to enhance point defect recombination rates and thereby the self-healing ability of advanced structural materials, and ii) to evaluate the stability and irradiation-induced evolution of such nanoscale precipitates resulting from enhanced point defect transport to and annihilation at precipitate interfaces. This project will utilize, and as necessary develop, computational materials modeling techniques within a hierarchical computational modeling approach, principally including molecular dynamics, kinetic Monte Carlo and spatially-dependent cluster dynamics modeling, to identify and understand the most important physical processes relevant to promoting the “selfhealing” or radiation resistance in advanced materials containing

  20. Modeling investigation of the stability and irradiation-induced evolution of nanoscale precipitates in advanced structural materials

    International Nuclear Information System (INIS)

    Materials used in extremely hostile environment such as nuclear reactors are subject to a high flux of neutron irradiation, and thus vast concentrations of vacancy and interstitial point defects are produced because of collisions of energetic neutrons with host lattice atoms. The fate of these defects depends on various reaction mechanisms which occur immediately following the displacement cascade evolution and during the longer-time kinetically dominated evolution such as annihilation, recombination, clustering or trapping at sinks of vacancies, interstitials and their clusters. The long-range diffusional transport and evolution of point defects and self-defect clusters drive a microstructural and microchemical evolution that are known to produce degradation of mechanical properties including the creep rate, yield strength, ductility, or fracture toughness, and correspondingly affect material serviceability and lifetimes in nuclear applications. Therefore, a detailed understanding of microstructural evolution in materials at different time and length scales is of significant importance. The primary objective of this work is to utilize a hierarchical computational modeling approach i) to evaluate the potential for nanoscale precipitates to enhance point defect recombination rates and thereby the self-healing ability of advanced structural materials, and ii) to evaluate the stability and irradiation-induced evolution of such nanoscale precipitates resulting from enhanced point defect transport to and annihilation at precipitate interfaces. This project will utilize, and as necessary develop, computational materials modeling techniques within a hierarchical computational modeling approach, principally including molecular dynamics, kinetic Monte Carlo and spatially-dependent cluster dynamics modeling, to identify and understand the most important physical processes relevant to promoting the ''selfhealing'' or radiation resistance in advanced

  1. Statistical analysis of the relationship between climate-induced maize yield and rainy-season precipitation across Inner Mongolia, North China

    Science.gov (United States)

    Huang, Jin; Chen, Xin; Zhou, Limin; Xue, Yan; Lin, Jie

    2016-06-01

    Exploring possible relationships between climate-induced maize yield and rainy-season precipitation under climate change is fundamental to science-based decision for food security in Inner Mongolia Autonomous Region (IMAR). To determine the relationship of maize yield with precipitation variables across IMAR during 1960-2012, we selected 11 precipitation indices of rainy season and divided IMAR into four sub-regions—west, middle, east, and northeast using principal component analysis and K-means clustering methods. Results show that climate-induced maize yield is more sensitive to precipitation variability in the west and middle IMAR. The most important precipitation factor that limits maize yield is moderate precipitation days in these two sub-regions. Moreover, west and middle Inner Mongolia was dominated by decreasing precipitation during the rainy season. Furthermore, the El Niño/La Niña-Southern Oscillation cycle has the significant influence on the rainy-season precipitation in the west and middle IMAR.

  2. Streptococcus oralis Induces Lysosomal Impairment of Macrophages via Bacterial Hydrogen Peroxide.

    Science.gov (United States)

    Okahashi, Nobuo; Nakata, Masanobu; Kuwata, Hirotaka; Kawabata, Shigetada

    2016-07-01

    Streptococcus oralis, an oral commensal, belongs to the mitis group of streptococci and occasionally causes opportunistic infections, such as bacterial endocarditis and bacteremia. Recently, we found that the hydrogen peroxide (H2O2) produced by S. oralis is sufficient to kill human monocytes and epithelial cells, implying that streptococcal H2O2 is a cytotoxin. In the present study, we investigated whether streptococcal H2O2 impacts lysosomes, organelles of the intracellular digestive system, in relation to cell death. S. oralis infection induced the death of RAW 264 macrophages in an H2O2-dependent manner, which was exemplified by the fact that exogenous H2O2 also induced cell death. Infection with either a mutant lacking spxB, which encodes pyruvate oxidase responsible for H2O2 production, or Streptococcus mutans, which does not produce H2O2, showed less cytotoxicity. Visualization of lysosomes with LysoTracker revealed lysosome deacidification after infection with S. oralis or exposure to H2O2, which was corroborated by acridine orange staining. Similarly, fluorescent labeling of lysosome-associated membrane protein-1 gradually disappeared during infection with S. oralis or exposure to H2O2 The deacidification and the following induction of cell death were inhibited by chelating iron in lysosomes. Moreover, fluorescent staining of cathepsin B indicated lysosomal destruction. However, treatment of infected cells with a specific inhibitor of cathepsin B had negligible effects on cell death; instead, it suppressed the detachment of dead cells from the culture plates. These results suggest that streptococcal H2O2 induces cell death with lysosomal destruction and then the released lysosomal cathepsins contribute to the detachment of the dead cells. PMID:27113357

  3. Atomic-resolution study of homogeneous radiation-induced precipitation in a neutron-irradiated W-10 at. % Re alloy. MSC report No. 5014

    International Nuclear Information System (INIS)

    The phenomenon of radiation-induced precipitation has been investigated in a W-10 at. % Re alloy using the atom-probe field-ion microscope. Results show a significant alteration of the microstructure of this alloy as a result of the fast-neutron irradiation. Precipitates with the composition approx. WRe (sigma phase) were detected at a density of 1016 cm-3. Coherent, semicoherent and possibly incoherent precipitates of the sigma phase have been observed. They were not associated with either linear or planar defects, or with any impurity atoms; i.e. a true homogeneous radiation-induced precipitation occurs in this alloy. A physical argument is presented for the nucleation of the sigma phase precipitates in the vicinity of displacement cascades produced by primary knock-on atoms. It is suggested that the nucleation of the sigma phase is due to the formation of tightly-bound mobil mixed dumbells which react to form an immobile rhenium cluster. The growth of this cluster into a precipitate is most likely driven by the irreversible vacancy: self-interstitial atom (SIA) annihilation reaction, as suggested recently by Cauvin and Martin. A mechanism for the suppression of voids, in this alloy, is presented which is self-consistent with the homogeneous radiation-induced precipitation mechanism

  4. The influence of vanadium on the static recrystallization of hot deformed austenite and on induced precipitation kinetics

    International Nuclear Information System (INIS)

    Few studies have dealt with the static recrystallization of austenite in microalloyed steels with only vanadium and in none of them has Avrami's equation been modeled for this type of steels. The determination of the Static Recrystallization Critical Temperature (SRCT), or the temperature at which the inhibition of static recrystallization begins as a consequence of the induced precipitation, is of great importance in hot rolling, as a rolling whose final passes take place at temperature lower than SRCT will give rise to an accumulated strain of the austenite (pancaking). The consequence of this will be that the ferrite grain which is obtained after the γ → α transformation will be much smaller than if the successive passes were carried out at temperatures above SRCT. In this work the static recrystallization kinetics and induced precipitation kinetics of three microalloyed steels with 5 are studied using torsional tests. The SRCT is determine for each one of them and Avrami's equation is expressed both in the range of temperatures above SRCT and the range of temperatures between SRCT and the temperature of the γ → α transformation (Ar3). These equations, together with others already published, make it possible to calculate the residual strain and the austenite grain size at the end of any hot rolling

  5. Blockage of protease-activated receptor 1 ameliorates heat-stress induced intestinal high permeability and bacterial translocation.

    Science.gov (United States)

    Xu, Qiu-lin; Guo, Xiao-hua; Liu, Jing-xian; Chen, Bin; Liu, Zhi-feng; Su, Lei

    2015-04-01

    Accumulated evidences indicate intestinal lesions play an important role in the pathogenesis of heatstroke. However, the underlying mechanisms by which heat stress causes intestinal barrier dysfunction and bacterial translocation remain unclear. In this study, we investigated the role of protease-activated receptor 1 (PAR1) in heat stress-induced intestinal hyper-permeability and bacterial translocation. Intestinal permeability in heat stressed mouse was evaluated by determining plasma endotoxin concentration and urinal lactulose/mannitol (L/M) ratio with gastric administration of L/M solution. Venous blood, liver, spleen and mesenteric lymph node tissues were collected for bacterial load test. Real time PCR was used to determine ileum PAR1 mRNA expression. In vitro study, permeability was assessed by determining trans-epithelial electrical resistance (TEER) in human intestinal Caco-2 cell line. RWJ-58259, a selective antagonist of PAR1, was used both in vivo and in vitro studies. The results showed that heat stress could increase ileum PAR1 mRNA level, urinal L/M ratio, plasma endotoxin concentration and bacterial load in the blood, spleen and mesenteric lymph nodes. Blocking PAR1 with RWJ-58259 (10 mg/kg) pretreatment could significantly reduce heat stress-induced above changes, but have no role to PAR1 mRNA level. In Caco-2 cells, heat stress-induced high permeability could also be reduced by RWJ-58259 (5-20 µmol/L). In summary, our results demonstrated that PAR1 signaling pathway may play an important role in the heat stress-induced elevation of intestinal permeability, bacterial translocation and the occurrence of endotoxemia. PMID:25492552

  6. Faulting induced by precipitation of water at grain boundaries in hot subducting oceanic crust.

    Science.gov (United States)

    Zhang, Junfeng; Green, Harry W; Bozhilov, Krassimir; Jin, Zhenmin

    2004-04-01

    Dehydration embrittlement has been proposed to explain both intermediate- and deep-focus earthquakes in subduction zones. Because such earthquakes primarily occur at shallow depths or within the core of the subducting plate, dehydration at relatively low temperatures has been emphasized. However, recent careful relocation of subduction-zone earthquakes shows that at depths of 100-250 km, earthquakes continue in the uppermost part of the slab (probably the former oceanic crust that has been converted to eclogite) where temperatures are higher. Here we show that at such pressures and temperatures, eclogite lacking hydrous phases but with significant hydroxyl incorporated as defects in pyroxene and garnet develops a faulting instability associated with precipitation of water at grain boundaries and the production of very small amounts of melt. This new faulting mechanism satisfactorily explains high-temperature earthquakes in subducting oceanic crust and could potentially be involved in much deeper earthquakes in connection with similar precipitation of water in the mantle transition zone (400-700 km depth). Of potential importance for all proposed high-pressure earthquake mechanisms is the very small amount of fluid required to trigger this instability. PMID:15071590

  7. Urban effects of Chennai on sea breeze induced convection and precipitation

    Indian Academy of Sciences (India)

    Matthew Simpson; Sethu Raman; R Suresh; U C Mohanty

    2008-12-01

    Doppler radar derived wind speed and direction profiles showed a well developed sea breeze circulation over the Chennai, India region on 28 June, 2003. Rainfall totals in excess of 100 mm resulted from convection along the sea breeze front. Inland propagation of the sea breeze front was observed in radar reflectivity imagery. High-resolution MM5 simulations were used to investigate the influence of Chennai urban land use on sea breeze initiated convection and precipitation. A comparison of observed and simulated 10 m wind speed and direction over Chennai showed that the model was able to simulate the timing and strength of the sea breeze. Urban effects are shown to increase the near surface air temperature over Chennai by 3.0 K during the early morning hours. The larger surface temperature gradient along the coast due to urban effects increased onshore flow by 4.0m s−1. Model sensitivity study revealed that precipitation totals were enhanced by 25 mm over a large region 150 km west of Chennai due to urban effects. Deficiency in model physics related to night-time forecasts are addressed.

  8. Cementation of sand grains based on carbonate precipitation induced by microorganism

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Microbes can produce 2 3 CO32-in an environment conductive to precipitation,so the incompact sands will be consolidated.This technology is environmentally friendly not only because it gives strength to the sand body,but also it allows water to penetrate into the sand body,which is unlike silicate cement that will destroy the ecosystem of the earth.After comparing the activity of three kinds of bacteria,the most suitable one was chosen for the study.However,the activity of this bacterium was still not high enough for the purpose,so it was purified.A suitable program for the consolidation and cementation of sands was also found in the experiment.The compressive strength and the porosity of the cemented sand body were tested to characterize the cementation effectiveness.XRD analysis showed that a new phase of calcite was produced between sand grains.The content of calcite was detected by TG.The study showed that the precipitation program was quite important to obtain a sound cemented sand body in addition to the activity of the bacteria.

  9. Role of granulocyte colony-stimulating factor in paclitaxel-induced intestinal barrier breakdown and bacterial translocation in rats

    Institute of Scientific and Technical Information of China (English)

    ZHANG Chi; XU Yang-guang; DUAN Xue-ning; LIU Yin-hua; ZHAO Jian-xin; XU Ling; YE Jing-ming

    2011-01-01

    Background Chemotherapy causes breakdown of the intestinal barrier, which may lead to bacterial translocation. Paclitaxel, an anti-tubulin agent, has many side effects; however, its effect on the intestinal barrier is unknown. Previous studies show that granulocyte colony-stimulating factor (G-CSF) plays an important role in modulating intestinal barrier function, but these studies are not conclusive. Here, we investigated the effects of paclitaxel on the intestinal barrier, and whether G-CSF could prevent paclitaxel-induced bacterial translocation.Methods Twenty-four male Sprague-Dawley rats were divided into three groups: control group, paclitaxel group and paclitaxel + G-CSF group. Intestinal permeability was measured by the urinary excretion rates of lactulose and mannitol administered by gavage. The mesenteric lymph nodes, spleen and liver were aseptically harvested for bacterial culture. Endotoxin levels and white blood cell (WBC) counts were measured and bacterial quantification performed using relative real-time PCR. Jejunum samples were also obtained for histological observation. Intestinal apoptosis was evaluated using a fragmented DNA assay and terminal deoxynucleotidyl transferase-mediated deoxyuridine triphosphate (dUTP)-biotin nick end-labeling staining. One-way analysis of variance and Fisher's exact test were used to compare differences between groups.Results Paclitaxel induced apoptosis in 12.5% of jejunum villus cells, which was reduced to 3.8% by G-CSF treatment. Apoptosis in the control group was 0.6%. Paclitaxel treatment also resulted in villus atrophy, increased intestinal permeability and a reduction in the WBC count. G-CSF treatment resulted in increased villus height and returned WBC counts to normal levels. No bacterial translocation was detected in the control group, whereas 6/8,8/8, and 8/8 rats in the paclitaxel group were culture-positive in the liver, spleen and mesenteric lymph nodes, respectively. Bacterial translocation was

  10. Bacterial Colonization and the Expression of Inducible Nitric Oxide Synthase in Murine Wounds

    Science.gov (United States)

    Mahoney, Eric; Reichner, Jonathan; Robinson Bostom, Leslie; Mastrofrancesco, Balduino; Henry, William; Albina, Jorge

    2002-01-01

    The expression of inducible nitric oxide synthase (iNOS) in two different murine wound models was investigated. Animals were subjected to either full-thickness linear skin incision with subcutaneous implantation of sterile polyvinyl alcohol sponges, or to 1.5 × 1.5-cm dorsal skin excision. Reverse transcriptase-polymerase chain reaction detected iNOS mRNA in all cell samples retrieved from the sponges. Immunoblotting of lysates of inflammatory cells harvested from the sponges failed to detect iNOS protein, and immunohistochemistry of the incisional wound was mildly positive. Inflammatory cells of excisional wounds stained strongly positive for iNOS. Cutaneous wounds were found to be colonized with Staphylococcus aureus. The detection of iNOS in cells from sponges inoculated in vivo with heat-killed bacteria and the reduction of immunohistochemical signal for iNOS in excisional wounds of animals treated with antibiotics support a role of bacteria in the induction of iNOS in wounds. The expression of iNOS in excisional wounds requires interferon-γ and functional lymphocytes because interferon-γ knockout and SCID-Beige mice exhibited attenuated iNOS staining in excisional wounds. The expression of iNOS in the inflammatory cells of murine wounds is a response to bacterial colonization and not part of the normal repair process elicited by sterile tissue injury. PMID:12466130

  11. A comparison of multivariate analysis techniques and variable selection strategies in a laser-induced breakdown spectroscopy bacterial classification

    International Nuclear Information System (INIS)

    Laser-induced breakdown spectroscopy has been used to obtain spectral fingerprints from live bacterial specimens from thirteen distinct taxonomic bacterial classes representative of five bacterial genera. By taking sums, ratios, and complex ratios of measured atomic emission line intensities three unique sets of independent variables (models) were constructed to determine which choice of independent variables provided optimal genus-level classification of unknown specimens utilizing a discriminant function analysis. A model composed of 80 independent variables constructed from simple and complex ratios of the measured emission line intensities was found to provide the greatest sensitivity and specificity. This model was then used in a partial least squares discriminant analysis to compare the performance of this multivariate technique with a discriminant function analysis. The partial least squares discriminant analysis possessed a higher true positive rate, possessed a higher false positive rate, and was more effective at distinguishing between highly similar spectra from closely related bacterial genera. This suggests it may be the preferred multivariate technique in future species-level or strain-level classifications. - Highlights: • Laser-induced breakdown spectroscopy was used to classify bacteria by genus. • We examine three different independent variable down selection models. • A PLS-DA returned higher rates of true positives than a DFA. • A PLS-DA returned higher rates of false positives than a DFA. • A PLS-DA was better able to discriminate similar spectra compared to DFA

  12. Yeast cell wall extract induces disease resistance against bacterial and fungal pathogens in Arabidopsis thaliana and Brassica crop.

    Science.gov (United States)

    Narusaka, Mari; Minami, Taichi; Iwabuchi, Chikako; Hamasaki, Takashi; Takasaki, Satoko; Kawamura, Kimito; Narusaka, Yoshihiro

    2015-01-01

    Housaku Monogatari (HM) is a plant activator prepared from a yeast cell wall extract. We examined the efficacy of HM application and observed that HM treatment increased the resistance of Arabidopsis thaliana and Brassica rapa leaves to bacterial and fungal infections. HM reduced the severity of bacterial leaf spot and anthracnose on A. thaliana and Brassica crop leaves with protective effects. In addition, gene expression analysis of A. thaliana plants after treatment with HM indicated increased expression of several plant defense-related genes. HM treatment appears to induce early activation of jasmonate/ethylene and late activation of salicylic acid (SA) pathways. Analysis using signaling mutants revealed that HM required SA accumulation and SA signaling to facilitate resistance to the bacterial pathogen Pseudomonas syringae pv. maculicola and the fungal pathogen Colletotrichum higginsianum. In addition, HM-induced resistance conferred chitin-independent disease resistance to bacterial pathogens in A. thaliana. These results suggest that HM contains multiple microbe-associated molecular patterns that activate defense responses in plants. These findings suggest that the application of HM is a useful tool that may facilitate new disease control methods. PMID:25565273

  13. Yeast cell wall extract induces disease resistance against bacterial and fungal pathogens in Arabidopsis thaliana and Brassica crop.

    Directory of Open Access Journals (Sweden)

    Mari Narusaka

    Full Text Available Housaku Monogatari (HM is a plant activator prepared from a yeast cell wall extract. We examined the efficacy of HM application and observed that HM treatment increased the resistance of Arabidopsis thaliana and Brassica rapa leaves to bacterial and fungal infections. HM reduced the severity of bacterial leaf spot and anthracnose on A. thaliana and Brassica crop leaves with protective effects. In addition, gene expression analysis of A. thaliana plants after treatment with HM indicated increased expression of several plant defense-related genes. HM treatment appears to induce early activation of jasmonate/ethylene and late activation of salicylic acid (SA pathways. Analysis using signaling mutants revealed that HM required SA accumulation and SA signaling to facilitate resistance to the bacterial pathogen Pseudomonas syringae pv. maculicola and the fungal pathogen Colletotrichum higginsianum. In addition, HM-induced resistance conferred chitin-independent disease resistance to bacterial pathogens in A. thaliana. These results suggest that HM contains multiple microbe-associated molecular patterns that activate defense responses in plants. These findings suggest that the application of HM is a useful tool that may facilitate new disease control methods.

  14. Induced mutation for disease resistance in rice with special reference to blast, bacterial blight and tungro

    International Nuclear Information System (INIS)

    Rice varieties Ratna, Pusa 2-21, Vijaya and Pankaj have been treated with gamma rays, EMS or sodium azide to improve their resistance against blast, bacterial leaf blight or tungro virus. For blast and tungro, mutants with improved resistance were selected. Variation in reaction to bacterial leaf blight has been used in crossbreeding to accumulate genes for resistance. (author)

  15. Soil frost-induced soil moisture precipitation feedback and effects on atmospheric states

    Science.gov (United States)

    Hagemann, Stefan; Blome, Tanja; Ekici, Altug; Beer, Christian

    2016-04-01

    land atmosphere feedback to precipitation over the high latitudes, which reduces the model's wet biases in precipitation and evapotranspiration during the summer. This is noteworthy as soil moisture - atmosphere feedbacks have previously not been in the research focus over the high latitudes. These results point out the importance of high latitude physical processes at the land surface for the regional climate.

  16. Gut Microbiota Dysbiosis Is Associated with Inflammation and Bacterial Translocation in Mice with CCl4-Induced Fibrosis

    OpenAIRE

    Gómez-Hurtado, Isabel; Santacruz, Arlette; Peiró, Gloria; Zapater, Pedro; Gutiérrez, Ana; Pérez-Mateo, Miguel; Sanz, Yolanda; Francés, Rubén

    2011-01-01

    Background Gut is the major source of endogenous bacteria causing infections in advanced cirrhosis. Intestinal barrier dysfunction has been described in cirrhosis and account for an increased bacterial translocation rate. Hypothesis and Aims We hypothesize that microbiota composition may be affected and change along with the induction of experimental cirrhosis, affecting the inflammatory response. Animals and Methods Progressive liver damage was induced in Balb/c mice by weight-controlled ora...

  17. Silver Iodide-Chitosan Nanotag Induced Biocatalytic Precipitation for Self-Enhanced Ultrasensitive Photocathodic Immunosensor.

    Science.gov (United States)

    Gong, Lingshan; Dai, Hong; Zhang, Shupei; Lin, Yanyu

    2016-06-01

    In this work, we first exposed that the application of p-type semiconductor, silver iodide-chitosan nanoparticle (SICNP), acted as peroxidase mimetic to catalyze the bioprecipitation reaction for signal-amplification photocathodic immunosensing of human interleukin-6 (IL-6). After immobilization of captured antibody onto a polyethylenimine-functionalized carbon nitride (CN) matrix, SICNPs as photoactive tags and peroxidase mimetics were labeled on secondary antibodies, which were subsequently introduced onto the sensing interface to construct sandwich immunoassay platform through antigen-antibody specific recognition. Due to the matched energy levels between CN and AgI, the photocurrent intensity and photostability of SICNP were dramatically improved with rapid separation and transportation of photogenerated carriers. Moreover, the insoluble product in effective biocatalytic precipitation reaction served as electron acceptor to scavenge the photoexcited electron, leading to great amplification of the photocurrent signal of SICNP again. With the help of multiamplification processes, this photocathodic immunosensor presented a turn-on photoelectrochemical performance for IL-6, which showed wide linear dynamic range from 10(-6) to 10 pg/mL with the ultralow detection limit of 0.737 ag/mL. This work also performed the promising application of SICNP in developing an ultrasensitive, cost-effective, and enzyme-free photocathodic immunosensor for biomarkers. PMID:27180822

  18. Derivation of a new continuous adjustment function for correcting wind-induced loss of solid precipitation: results of a Norwegian field study

    Science.gov (United States)

    Wolff, M. A.; Isaksen, K.; Petersen-Øverleir, A.; Ødemark, K.; Reitan, T.; Brækkan, R.

    2015-02-01

    Precipitation measurements exhibit large cold-season biases due to under-catch in windy conditions. These uncertainties affect water balance calculations, snowpack monitoring and calibration of remote sensing algorithms and land surface models. More accurate data would improve the ability to predict future changes in water resources and mountain hazards in snow-dominated regions. In 2010, a comprehensive test site for precipitation measurements was established on a mountain plateau in southern Norway. Automatic precipitation gauge data are compared with data from a precipitation gauge in a Double Fence Intercomparison Reference (DFIR) wind shield construction which serves as the reference. A large number of other sensors are provided supporting data for relevant meteorological parameters. In this paper, data from three winters are used to study and determine the wind-induced under-catch of solid precipitation. Qualitative analyses and Bayesian statistics are used to evaluate and objectively choose the model that best describes the data. A continuous adjustment function and its uncertainty are derived for measurements of all types of winter precipitation (from rain to dry snow). A regression analysis does not reveal any significant misspecifications for the adjustment function, but shows that the chosen model does not describe the regression noise optimally. The adjustment function is operationally usable because it is based only on data available at standard automatic weather stations. The results show a non-linear relationship between under-catch and wind speed during winter precipitation events and there is a clear temperature dependency, mainly reflecting the precipitation type. The results allow, for the first time, derivation of an adjustment function based on measurements above 7 m s-1. This extended validity of the adjustment function shows a stabilization of the wind-induced precipitation loss for higher wind speeds.

  19. Microbially induced carbonate precipitation (MICP) by denitrification as ground improvement method - Process control in sand column experiments

    Science.gov (United States)

    Pham, Vinh; van Paassen, Leon; Nakano, Akiko; Kanayama, Motohei; Heimovaara, Timo

    2013-04-01

    Calcite precipitation induced by microbes has been proven to be efficient in stabilizing granular soils, especially with urea hydrolysis, as it has been successfully demonstrated in a pilot application 2010. However, as a byproduct highly concentrated ammonium chloride (NH4Cl) solution is produced, which has to be removed and disposed and forms a significant disadvantage of the technique that makes an alternative process like denitrification preferred. The proof of principle of microbially induced calcite precipitation (MICP) by denitrification has been demonstrated by Van Paassen et al (2010) who suggested that instead of producing waste as a byproduct, different pre-treated waste streams could be used as substrates for in situ growth of denitrifying bacteria and simultaneous cementation without producing waste to be removed. In this study sand column experiments are performed in which calcium carbonate was successfully precipitated by indigenous denitrifying micro-organisms, which were supplied weekly with a pulse of a substrate solution containing calcium acetate and calcium nitrate. Besides the production of calcite and the growth of bacteria in biofilms, the reduction of nitrate resulted in the production of (nitrogen) gas. It was observed that this gas partly fills up the pore space and consequently contributed to a reduction of the permeability of the treated sand. The presence of gas in the pore space affected the flow of the injected substrates and influenced to the distribution of calcium carbonate. The effect of the mean particle size (D50) on the flow and transport of solutes and gas in the porous media has been evaluated by treating several columns with varying grain size distribution and comparing the change in permeability after each incubation period and analyzing the distribution of the gas throughout the columns using X-ray computed tomography (CT) scanning. The present results show that there is a considerable decrease of permeability - a

  20. Giardia duodenalis induces paracellular bacterial translocation and causes postinfectious visceral hypersensitivity.

    Science.gov (United States)

    Halliez, Marie C M; Motta, Jean-Paul; Feener, Troy D; Guérin, Gaetan; LeGoff, Laetitia; François, Arnaud; Colasse, Elodie; Favennec, Loic; Gargala, Gilles; Lapointe, Tamia K; Altier, Christophe; Buret, André G

    2016-04-15

    Irritable bowel syndrome (IBS) is the most frequent functional gastrointestinal disorder. It is characterized by abdominal hypersensitivity, leading to discomfort and pain, as well as altered bowel habits. While it is common for IBS to develop following the resolution of infectious gastroenteritis [then termed postinfectious IBS (PI-IBS)], the mechanisms remain incompletely understood. Giardia duodenalis is a cosmopolitan water-borne enteropathogen that causes intestinal malabsorption, diarrhea, and postinfectious complications. Cause-and-effect studies using a human enteropathogen to help investigate the mechanisms of PI-IBS are sorely lacking. In an attempt to establish causality between giardiasis and postinfectious visceral hypersensitivity, this study describes a new model of PI-IBS in neonatal rats infected with G. duodenalis At 50 days postinfection with G. duodenalis (assemblage A or B), long after the parasite was cleared, rats developed visceral hypersensitivity to luminal balloon distension in the jejunum and rectum, activation of the nociceptive signaling pathway (increased c-fos expression), histological modifications (villus atrophy and crypt hyperplasia), and proliferation of mucosal intraepithelial lymphocytes and mast cells in the jejunum, but not in the rectum. G. duodenalis infection also disrupted the intestinal barrier, in vivo and in vitro, which in turn promoted the translocation of commensal bacteria. Giardia-induced bacterial paracellular translocation in vitro correlated with degradation of the tight junction proteins occludin and claudin-4. The extensive observations associated with gut hypersensitivity described here demonstrate that, indeed, in this new model of postgiardiasis IBS, alterations to the gut mucosa and c-fos are consistent with those associated with PI-IBS and, hence, offer avenues for new mechanistic research in the field. PMID:26744469

  1. Practical value of induced mutants of rice resistant to bacterial leaf blight

    International Nuclear Information System (INIS)

    The thermal neutron induced mutants of rice resistance to bacterial leaf blight (BLB), designated M41 and M57, in which resistance is conditioned by a single gene and polygenes, respectively, were evaluated for their practical value for breeding rice varieties resistant to BLB. Three experiments were carried out. (1) The nature of the resistance of the mutants was examined from various aspects. The two mutants were resistant to the Japanese and Philippines BLB differential races. The resistance of M41 was found to vary to some extent with the planting year, the amount of nitrogen fertilizer applied and the plant age compared with M57, although the resistance level of M41 was higher than that of M57. (2) BLB resistant F3 or F4 lines derived from crosses of the mutants x original variety Harebare were analysed for some agronomic traits. One of the M57 x Harebare lines that had a good shape and a higher yielding capacity was not released as a commercial variety because of the poor taste of the rice. All the M41 x Harebare lines carried some negative traits inherited from M41, e.g. a lower yielding capacity, an inadequate mature husk colour, etc. (3) The F3 lines from crosses of the leading Japanese varieties Koshihikari and Akitakomachi x M41 were also analysed for their resistance and some other agronomic traits. Some of the resistant lines were found to exhibit favourable traits, e.g. good taste of the rice, which may lead to the development of new commercial varieties in the near future. (author). 14 refs, 9 figs 2 tabs

  2. Are grazer-induced adaptations of bacterial abundance and morphology time-dipendent?

    OpenAIRE

    Corno, Gianluca

    2006-01-01

    Predation by protists is a well known force that shapes bacterial communities and can lead to filamentous forms and aggregations of large cell clusters. These classic resistance strategies were observed as a direct consequence of predation by heteroand mixotrophic flagellates (the main group of bacteria predators in water) on natural assemblages of bacteria and on single plastic strains. Recently it was shown that a long time exposure (about 30 days) of a bacterial strain, characterized by hi...

  3. Are grazer-induced adaptations of bacterial abundance and morphology timedependent?

    OpenAIRE

    Corno, Gianluca

    2006-01-01

    Predation by protists is a well known force that shapes bacterial communities and can lead to filamentous forms and aggregations of large cell clusters. These classic resistance strategies were observed as a direct consequence of predation by heteroand mixotrophic flagellates (the main group of bacteria predators in water) on natural assemblages of bacteria and on single plastic strains. Recently it was shown that a long time exposure (about 30 days) of a bacterial strain, characterized by hi...

  4. Melatonin reduces bacterial translocation and apoptosis in trinitrobenzene sulphonic acid-induced colitis of rats

    OpenAIRE

    Alper Akcan, Can Kucuk, Erdogan Sozuer, Duygu Esel, Hizir Akyildiz, Hulya Akgun, Sabahattin Muhtaroglu, Yucel Aritas

    2008-01-01

    AIM: To investigate the effects of exogenous melatonin on bacterial translocation and apoptosis in a rat ulcerative colitis model.METHODS: Rats were randomly assigned to three groups: groupI: control, group II: experimental colitis, group III: colitis plus melatonin treatment. On d 11 after colitis, plasma tumor necrosis factor-α, portal blood endotoxin levels, colon tissue myeloperoxidase and caspase-3 activity were measured. Bacterial translocation was quantified by blood, lymph node, liver...

  5. Radiation-induced changes to mammalian cells as a precipitating factor in somatic radiation injuries

    International Nuclear Information System (INIS)

    Radiation-induced inhibitions of proliferation were assessed in cell cultures examined for their colony-forming abilities as well as from changes of growth curves. The results of those measurements, along with simulating calculations, underlined the fact that the colony-forming capacity of a cell can by no means be equated with cell survival, unless due attention is given to the size of the colony formed. It is the size of the colony that provides a measure of the damage done to the irradiated cell. Cells counts are the most reliable method to ascertain the course of proliferation following radiation exposure. The difference between the two methods mentioned became particularly evident in studies with radiation protection substances. Dithiothreitol (DTT) and mercaptopropionyl glycine (MPG) were on the basis of colony formation clearly shown to offer protection against radiation. The growth curves, however, revealed that the proliferation of cells irradiated in the presence of radiation protection substances was even more strongly inhibited than that of cells influenced by irradiation alone. The neutral elution method failed to provide irrefutable evidence that the rate of double strand breaks was reduced by those two substances. Cysteamine and DTT were, however, able to inhibit radiation-induced changes to the proteins of human erythrocyte membranes. (orig./MG)

  6. Endoscopic application of EGF-chitosan hydrogel for precipitated healing of GI peptic ulcers and mucosectomy-induced ulcers.

    Science.gov (United States)

    Maeng, Jin Hee; Bang, Byoung Wook; Lee, Eunhye; Kim, Jungju; Kim, Hyung Gil; Lee, Don Haeng; Yang, Su-Geun

    2014-02-01

    The gastrointestinal (GI) endoscopy has become a standard diagnostic tool for GI ulcers and cancer. In this study we studied endoscopic application of epidermal growth factor-containing chitosan hydrogel (EGF-CS gel) for treatment of GI ulcer. We hypothesized that directional ulcer-coating using EGF-CS gel via endoscope would precipitate ulcer-healing. EGF-CS gel was directly introduced to the ulcer-region after ulceration in acetic acid-induced gastric ulcer (AAU) and mucosal resection-induced gastric ulcer (MRU) rabbit and pig models. The ulcer dimensions and mucosal thicknesses were estimated and compared with those in the control group. Healing efficacy was more closely evaluated by microscopic observation of the ulcer after histological assays. In the AAU model, the normalized ulcer size of the gel-treated group was 2.3 times smaller than that in the non-treated control group on day 3 after ulceration (P MRU model, the normalized ulcer size of the gel-treated group was 5.4 times smaller compared to that in the non-treated control group on day 1 after ulceration (P < 0.05). Histological analysis supported the ability of EGF-CS gel to heal ulcers. The present study suggests that EGF-CS gel is a promising candidate for treating gastric bleeding and ulcers. PMID:24338378

  7. Tyrosine-phosphorylated caveolin-1 blocks bacterial uptake by inducing Vav2-RhoA-mediated cytoskeletal rearrangements.

    Directory of Open Access Journals (Sweden)

    Jan Peter Boettcher

    Full Text Available Certain bacterial adhesins appear to promote a pathogen's extracellular lifestyle rather than its entry into host cells. However, little is known about the stimuli elicited upon such pathogen host-cell interactions. Here, we report that type IV pili (Tfp-producing Neisseria gonorrhoeae (P(+GC induces an immediate recruitment of caveolin-1 (Cav1 in the host cell, which subsequently prevents bacterial internalization by triggering cytoskeletal rearrangements via downstream phosphotyrosine signaling. A broad and unbiased analysis of potential interaction partners for tyrosine-phosphorylated Cav1 revealed a direct interaction with the Rho-family guanine nucleotide exchange factor Vav2. Both Vav2 and its substrate, the small GTPase RhoA, were found to play a direct role in the Cav1-mediated prevention of bacterial uptake. Our findings, which have been extended to enteropathogenic Escherichia coli, highlight how Tfp-producing bacteria avoid host cell uptake. Further, our data establish a mechanistic link between Cav1 phosphorylation and pathogen-induced cytoskeleton reorganization and advance our understanding of caveolin function.

  8. New evidence for hybrid acrylic/TiO2 films inducing bacterial inactivation under low intensity simulated sunlight.

    Science.gov (United States)

    Bonnefond, Audrey; González, Edurne; Asua, Jose María; Leiza, Jose Ramon; Kiwi, John; Pulgarin, Cesar; Rtimi, Sami

    2015-11-01

    This study addresses the preparation and characterization of hybrid films prepared from Titanium dioxide (TiO2) Pickering stabilized acrylic polymeric dispersion as well as their bacterial inactivation efficiency under sunlight irradiation. Complete bacterial inactivation under low intensity simulated solar light irradiation (55 mW/cm(2)) was observed within 240 min for the films containing 10 weight based on monomers (wbm) % of TiO2, whereas 360 min were needed for the films containing 20 wbm% of TiO2. The hybrid films showed repetitive Escherichia coli (E. coli) inactivation under light irradiation. TiO2 released from the films surfaces was measured by inductively coupled plasma mass spectrometry (IPC-MS), obtaining values of ∼ 0.5 and 1 ppb/cm(2) for the films containing 10 wbm% and 20 wbm% of TiO2, respectively, far below the allowed cytotoxicity level for TiO2 (200 ppb). Transmission electron microscopy (TEM) of the hybrid films showed that TiO2 nanoparticles (NPs) were located at the polymer particle's surface forming a continuous inorganic network inside the film matrix. Atomic force microscopy (AFM) images showed differences in the TiO2 dispersion between the air-film and film-substrate interfaces. Films containing 10 wbm% of TiO2 had higher roughness (Rg) at both interfaces than the one containing 20 wbm% of TiO2 inducing an increase in the bacterial adhesion as well as the bacterial inactivation kinetics. The highly oxidative OH-radicals participating in the bacterial inactivation were determined by fluorescence. PMID:26222605

  9. Antagonistic rhizobacteria and jasmonic acid induce resistance against tomato bacterial spot

    Directory of Open Access Journals (Sweden)

    Hélvio Gledson Maciel Ferraz

    2015-12-01

    Full Text Available AbstractTomato bacterial spot on tomato may be caused by four species of Xanthomonas and among them X. gardneri(Xg is the most destructive one, especially in areas irrigated using a center pivot system in Minas Gerais state and the midwest region of Brazil. Due to the ineffectiveness of chemical control and the lack of cultivars with high levels of genetic resistance, this study investigated the potential of three antagonists (Streptomyces setonii (UFV618, Bacillus cereus (UFV592 and Serratia marcescens (UFV252, and the hormone jasmonic acid (JA as a positive control, to reduce bacterial spot symptoms and to potentiate defense enzymes in the leaves of tomato plants infected by Xg. Tomato seeds were microbiolized with each antagonist, and the soil was drenched with these bacteria. The plants were sprayed with JA 48 h before Xginoculation. The final average severity on the tomato plants was reduced by 29.44, 59.26 and 61.33% in the UFV592, UFV618 and JA treatments, respectively. The UFV618 antagonist was as effective as JA in reducing bacterial spot symptoms on tomatoes, which can be explained by the greater activities of defense enzymes that are commonly involved in host resistance against bacterial diseases. These results suggest that JA and the UFV618 antagonist can be used in the integrated management of bacterial spot on tomatoes.

  10. Changes in soil bacterial communities induced by the invasive plant Pennisetum setaceum in a semiarid environment

    Science.gov (United States)

    Rodriguez-Caballero, Gema; Caravaca, Fuensanta; del Mar Alguacil, María; Fernández-López, Manuel; José Fernández-González, Antonio; García-Orenes, Fuensanta; Roldán, Antonio

    2016-04-01

    Invasive alien species are considered as a global threat being among the main causes of biodiversity loss. Plant invasions have been extensively studied from different disciplines with the purpose of identifying predictor traits of invasiveness and finding solutions. However, less is known about the implication of the rhizosphere microbiota in these processes, even when it is well known the importance of the interaction between plant rhizosphere and microbial communities. The objective of this study was to determine whether native and invasive plants support different bacterial communities in their rhizospheres and whether there are bacterial indicator species that might be contributing to the invasion process of these ecosystems. We carried out a study in five independent locations under Mediterranean semiarid conditions, where the native Hyparrhenia hirta is being displaced by Pennisetum setaceum, an aggressive invasive Poaceae and soil bacterial communities were amplified and 454-pyrosequenced. Changes in the composition and structure of the bacterial communities, owing to the invasive status of the plant, were detected when the richness and alpha-diversity estimators were calculated as well as when we analyzed the PCoA axes scores. The Indicator Species Analysis results showed a higher number of indicators for invaded communities at all studied taxonomic levels. In conclusion, the effect of the invasiveness and its interaction with the soil location has promoted shifts in the rhizosphere bacterial communities which might be facilitating the invader success in these ecosystems.

  11. Identification of Genes Induced in Lolium multiflorum by Bacterial Wilt Infection

    DEFF Research Database (Denmark)

    Wichmann, Fabienne; Asp, Torben; Widmer, Franco; Kölliker, Roland

    Xanthomonas translucens pv. graminis(Xtg) causes bacterial wilt in many forage grasses including Italian ryegrass (Lolium multiflorum Lam), seriously reducing yield and quality. Breeding for resistance is currently the only practicable means of disease control. Molecular markers closely linked to...... resistance genes or QTL could complement and support phenotypic selection. We used comparative gene expression analysis of a partially resistant L. multiflorum genotype infected and not infected with Xtg to identify genes involved in the control of resistance to bacterial wilt. The genes differentially...... expressed upon infection will serve as the basis for the identification of key genes involved in bacterial wilt resistance and to develop molecular markers for marker assisted breeding. Fluorescently labelled cDNA prepared from plant leaves collected at four different time points after infection was...

  12. Rumen microbial and fermentation characteristics are affected differently by bacterial probiotic supplementation during induced lactic and subacute acidosis in sheep

    Directory of Open Access Journals (Sweden)

    Lettat Abderzak

    2012-07-01

    Full Text Available Abstract Background Ruminal disbiosis induced by feeding is the cause of ruminal acidosis, a digestive disorder prevalent in high-producing ruminants. Because probiotic microorganisms can modulate the gastrointestinal microbiota, propionibacteria- and lactobacilli-based probiotics were tested for their effectiveness in preventing different forms of acidosis. Results Lactic acidosis, butyric and propionic subacute ruminal acidosis (SARA were induced by feed chalenges in three groups of four wethers intraruminally dosed with wheat, corn or beet pulp. In each group, wethers were either not supplemented (C or supplemented with Propionibacterium P63 alone (P or combined with L. plantarum (Lp + P or L. rhamnosus (Lr + P. Compared with C, all the probiotics stimulated lactobacilli proliferation, which reached up to 25% of total bacteria during wheat-induced lactic acidosis. This induced a large increase in lactate concentration, which decreased ruminal pH. During the corn-induced butyric SARA, Lp + P decreased Prevotella spp. proportion with a concomitant decrease in microbial amylase activity and total volatile fatty acids concentration, and an increase in xylanase activity and pH. Relative to the beet pulp-induced propionic SARA, P and Lr + P improved ruminal pH without affecting the microbial or fermentation characteristics. Regardless of acidosis type, denaturing gradient gel electrophoresis revealed that probiotic supplementations modified the bacterial community structure. Conclusion This work showed that the effectiveness of the bacterial probiotics tested depended on the acidosis type. Although these probiotics were ineffective in lactic acidosis because of a deeply disturbed rumen microbiota, some of the probiotics tested may be useful to minimize the occurrence of butyric and propionic SARA in sheep. However, their modes of action need to be further investigated.

  13. Antibiotic exposure can induce various bacterial virulence phenotypes in multidrug-resistant Salmonella enterica serovar Typhimurium

    Science.gov (United States)

    Salmonella is one of the most prevalent bacterial foodborne diseases in the United States and causes an estimated 1 million human cases every year. Multidrug-resistant (MDR) Salmonella has emerged as a public health issue as it has been associated with increased morbidity in humans and mortality in...

  14. Plant secondary metabolite-induced shifts in bacterial community structure and degradative ability in contaminated soil

    Czech Academy of Sciences Publication Activity Database

    Uhlík, O.; Musilová, L.; Rídl, Jakub; Hroudová, Miluše; Vlček, Čestmír; Koubek, J.; Holečková, M.; Mackova, M.; Macek, T.

    2013-01-01

    Roč. 97, č. 20 (2013), s. 9245-9256. ISSN 0175-7598 Grant ostatní: EK(XE) 265946; GA MŠk(CZ) ME10041 Institutional support: RVO:68378050 Keywords : plant secondary metabolites (PSM) * bacterial community * metabolic activity * bioremediation * pyrosequencing Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.811, year: 2013

  15. Chronic Liver Disease Impairs Bacterial Clearance in a Human Model of Induced Bacteremia

    OpenAIRE

    Ashare, Alix; Stanford, Clark; Hancock, Patricia; Stark, Donna; Lilli, Kathleen; Birrer, Emily; Nymon, Amanda; Doerschug, Kevin C.; Hunninghake, Gary W.

    2009-01-01

    Sepsis often causes impaired hepatic function. Patients with liver disease have an increased risk of bacteremia. This is thought to be secondary to impaired reticuloendothelial system function. However, this has not been demonstrated clinically. Since transient bacteremia occurs following toothbrushing, we hypothesized that subjects with cirrhosis would have impaired bacterial clearance following toothbrushing compared with subjects with pulmonary disease and healthy controls. After baseline ...

  16. Melatonin reduces bacterial translocation and apoptosis in trinitrobenzene sulphonic acid-induced colitis of rats

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    AIM:To investigate the effects of exogenous melatonin on bacterial translocation and apoptosis in a rat ulcerative colitis model.METHODS:Rats were randomly assigned to three groups:group Ⅰ:control,group Ⅱ: experimental colitis,group Ⅲ:colitis plus melatonin treatment.On d 11 after colitis,plasma tumor necrosis factor-α,portal blood endotoxin levels,colon tissue myeloperoxidase and caspase-3 activity were measured.Bacterial translocation was quantified by blood,lymph node,liver and spleen culture.RESULTS:We observed a significantly reduced incidence of bacterial translocation to the liver,spleen,mesenteric lymph nodes,portal and systemic blood in animals treated with melatonin.Treatment with melatonin significantly decreased the caspase-3 activity in colonic tissues compared to that in trinitrobenzene sulphonic acid-treated rats (16.11 ± 2.46 vs 32.97 ± 3.91,P < 0.01).CONCLUSION:Melatonin has a protective effect on bacterial translocation and apoptosis.

  17. A case of septic-shock-induced bacterial translocation during chemoradiotherapy for head and neck cancer

    International Nuclear Information System (INIS)

    Combination therapy such as chemotherapy and radiotherapy is often used for head and neck cancer to maintain potency, but may trigger undesirable adverse effects. A 60-year-old man suddenly developing shock and multiple organ failure during chemoradiotherapy for hypopharyngeal carcinoma required intensive treatment. Bacterial translocation was thought to have caused shock. We discuss clinical features and the diagnostic process. (author)

  18. Cheese 'refinement' with whey B-vitamin removal during precipitation potentially induces temporal 'functional' dietary shortage: homocysteine as a biomarker.

    Science.gov (United States)

    Shapira, N

    2014-07-25

    Cottage cheese 'refinement' with massive B-vitamin losses (≈70-84%) through whey removal during precipitation may potentially induce an acute imbalance between protein/methionine load and temporal inadequacy/shortage of nutrients critical for their metabolism, i.e. B6 and B12. The temporal effect of cottage cheese consumption was evaluated using increased plasma homocysteine as a B-vitamin shortage marker. In a double-blind study, healthy, normal-weight (BMI = 22-27), premenopausal women aged 25-45 years were first given a methionine load (100 mg kg(-1), n = 15), then cottage cheese alone (500 g, ≈50 g protein, ≈1200 mg methionine, n = 49) at breakfast, and then with added B6 (2 mg, n = 8) and/or B6 + folate (1 mg + 200 mcg, n = 7). Plasma homocysteine was measured preprandially (t0) and then postprandially 5 h (t5) and ≥6-24 h. Cheese-induced homocysteine increased 28.7% (p ≤ 0.001), ≈60% of the free methionine response, remaining higher through ≥6-8 h. Co-supplementation with B6 reduced the Hcy increase by 45.0% (to 14.9%, p = 0.025), and that with B6 + folate reduced the Hcy increase by 72.3% (to 7.5%, p = 0.556, NS). Homocysteine increased more in participants with lower baselines (vitamin depletion - i.e. to B6 ≈ 2.0-4.0 μg g(-1) protein, far below women's metabolic requirement (15-20 μg g(-1)) - appeared to induce acute relative shortage compared to methionine/protein loads, exemplified by greater homocysteine increases than with other animal proteins (previous data), more so with lower baseline homocysteine. Smaller increases following re-supplementation demonstrated potential for 'functional fortification'/co-supplementation. Unnoted cheese 'refinement', like white bread, potentially induces episodic vitamin shortage effects, warranting consideration for acute/cumulative implications, alternative processing/supplementation technologies, and food combinations, especially for at-risk populations (i.e. with genetic, hormonal/gender, or aging

  19. Schottky-Barrier-Induced AC Surface Photovoltages in Au-Precipitated n-Type Si(001) Surfaces

    Science.gov (United States)

    Shimizu, Hirofumi; Sanada, Yuji

    2011-08-01

    We have studied the behavior of Au clusters on the top surface of a SiO2 film and/or at the SiO2/Si interface as a function of oxidation temperature between room temperature (RT) and 500 °C in conjunction with a Schottky-barrier-induced AC surface photovoltage (SPV) and an enhanced SiO2 growth due to Au at 500 °C. Upon rinsing an n-type Si(001) wafer in a Au-contaminated aqueous solution, precipitated Au atoms are observed as clusterlike Au granules on the top surface of SiO2 (Au surface concentration, 2.3 ×1015 atoms/cm2). In thermally oxidized Au-contaminated n-type Si(001) wafers between 100 and 500 °C, a Au cluster of a similar shape is also observed. Chemical analysis gives evidence that Au existed at the SiO2/Si interface, which produced Au/n-Si Schottky-barrier-type AC SPV between 100 and 500 °C as well as at both RT and higher temperatures, indicating that the Au/n-Si Schottky barrier remains in a similar manner. In the Au-contaminated n-Si thermally oxidized at 500 °C, the catalytic action of Au atoms enhances SiO2 growth as well as the case at high temperatures between 750 and 900 °C. The mechanism of the enhanced growth is proposed.

  20. Short term exposure to elevated trinitrotoluene concentrations induced structural and functional changes in the soil bacterial community

    International Nuclear Information System (INIS)

    We investigated the acute impact of trinitrotoluene (TNT) contamination of soil on the aerobic bacterial community composition and function. The contamination of the environment with explosive residues presents a serious problem at sites across the world, with the highly toxic compound TNT being the most widespread explosive contaminant. We investigated the acute impact of trinitrotoluene (TNT) contamination of soil on the aerobic bacterial community composition and function. Soil microcosms were amended with a range of concentrations of TNT for 30 days. A polyphasic approach encompassing culture-independent molecular analysis by DGGE, community-level physiological profiling (CLPP) and cell enumeration revealed that the amendment of soils with TNT resulted in a shift from slower growing k-strategists towards faster growing r-strategists. Pseudomonads became prevalent at high concentrations of TNT. Pollution induced community tolerance (PICT) was observed as TNT concentrations increased. Chemical analyses revealed that TNT was reduced to its amino derivatives, products of reductive microbial transformation. The transformation to amino derivatives decreased at high concentrations of TNT, indicative of inhibition of microbial TNT transformation. - The bacterial community structure, function and diversity changed when soil was amended with TNT; pseudomonads increased in prevalence and tolerance to TNT toxicity increased

  1. Enhancement of Methacholine-Evoked Tracheal Contraction Induced by Bacterial Lipopolysaccharides Depends on Epithelium and Tumor Necrosis Factor

    Directory of Open Access Journals (Sweden)

    T. Secher

    2012-01-01

    Full Text Available Inhaled bacterial lipopolysaccharides (LPSs induce an acute tumour necrosis factor-alpha (TNF-α- dependent inflammatory response in the murine airways mediated by Toll-like receptor 4 (TLR4 via the myeloid differentiation MyD88 adaptor protein pathway. However, the contractile response of the bronchial smooth muscle and the role of endogenous TNFα in this process have been elusive. We determined the in vivo respiratory pattern of C57BL/6 mice after intranasal LPS administration with or without the presence of increasing doses of methacholine (MCh. We found that LPS administration altered the basal and MCh-evoked respiratory pattern that peaked at 90 min and decreased thereafter in the next 48 h, reaching basal levels 7 days later. We investigated in controlled ex vivo condition the isometric contraction of isolated tracheal rings in response to MCh cholinergic stimulation. We observed that preincubation of the tracheal rings with LPS for 90 min enhanced the subsequent MCh-induced contractile response (hyperreactivity, which was prevented by prior neutralization of TNFα with a specific antibody. Furthermore, hyperreactivity induced by LPS depended on an intact epithelium, whereas hyperreactivity induced by TNFα was well maintained in the absence of epithelium. Finally, the enhanced contractile response to MCh induced by LPS when compared with control mice was not observed in tracheal rings from TLR4- or TNF- or TNF-receptor-deficient mice. We conclude that bacterial endotoxin-mediated hyperreactivity of isolated tracheal rings to MCh depends upon TLR4 integrity that signals the activation of epithelium, which release endogenous TNFα.

  2. Bacterial antigen expression is an important component in inducing an immune response to orally administered Salmonella-delivered DNA vaccines.

    Directory of Open Access Journals (Sweden)

    Michelle E Gahan

    Full Text Available BACKGROUND: The use of Salmonella to deliver heterologous antigens from DNA vaccines is a well-accepted extension of the success of oral Salmonella vaccines in animal models. Attenuated S. typhimurium and S. typhi strains are safe and efficacious, and their use to deliver DNA vaccines combines the advantages of both vaccine approaches, while complementing the limitations of each technology. An important aspect of the basic biology of the Salmonella/DNA vaccine platform is the relative contributions of prokaryotic and eukaryotic expression in production of the vaccine antigen. Gene expression in DNA vaccines is commonly under the control of the eukaryotic cytomegalovirus (CMV promoter. The aim of this study was to identify and disable putative bacterial promoters within the CMV promoter and evaluate the immunogenicity of the resulting DNA vaccine delivered orally by S. typhimurium. METHODOLOGY/PRINCIPAL FINDINGS: The results reported here clearly demonstrate the presence of bacterial promoters within the CMV promoter. These promoters have homology to the bacterial consensus sequence and functional activity. To disable prokaryotic expression from the CMV promoter a series of genetic manipulations were performed to remove the two major bacterial promoters and add a bacteria transcription terminator downstream of the CMV promoter. S. typhimurium was used to immunise BALB/c mice orally with a DNA vaccine encoding the C-fragment of tetanus toxin (TT under control of the original or the modified CMV promoter. Although both promoters functioned equally well in eukaryotic cells, as indicated by equivalent immune responses following intramuscular delivery, only the original CMV promoter was able to induce an anti-TT specific response following oral delivery by S. typhimurium. CONCLUSIONS: These findings suggest that prokaryotic expression of the antigen and co-delivery of this protein by Salmonella are at least partially responsible for the successful

  3. Gamma radiation-induced mutant of NSIC RC144 with broad-spectrum resistance to bacterial blight

    International Nuclear Information System (INIS)

    Mutant lines derived from gamma radiation-treated commercial variety NSIC RC144 were produced and screened for novel resistance to bacterial blight, one of the most serious diseases of rice. Preliminary screening of a bulk M2 population through induced method using race 3 of the pathogen Xanthomonas oryzae pv. oryzae (Xoo) resulted in the selection of 89 resistant plants. Subsequent repeated bacterial blight screenings and generation advance for five seasons resulted in the selection of two highly resistant M7 sister lines whose origin can be traced to a single M2 plant. DNA fingerprinting using 63 genome-wide simple sequence repeat (SSR) markers revealed an identical pattern in these lines. Using the same set of markers, they also exhibited 98% similarity to wild type NSIC RC144 indicating that the resistance is due to mutation and not due to genetic admixture or seed impurity. Two seasons of bacterial blight screening using 14 local isolates representing ten races of Xoo revealed an identical reaction pattern in these lines. The reaction pattern was observed to be unique compared to known patterns in four IRBB isolines (IRBB 4, 5, 7 and 21) with strong resistant reaction to bacterial blight suggesting possible novel resistance. The susceptible reaction in F1 testcrosses using Xoo race 6 and the segregation patterns in two F2 populations that fit with the expected 3 susceptible: 1 resistant ratio (P = 0.4, ns) suggest a single-gene recessive mutation in these lines. These mutants are now being used as resistance donor in the breeding program while further molecular characterization to map and characterize the mutated gene is being pursued

  4. Deformation-induced dissolution and growth of precipitates in an Al–Mg–Er alloy during high-cycle fatigue

    International Nuclear Information System (INIS)

    The dissolution and growth of Al3(Er, Zr) precipitates during tensile fatigue experiments were investigated by quasi-in situ and post-mortem scanning transmission electron microscopy with Z contrast imaging and X-ray energy dispersive spectroscopy. Al3(Er, Zr) particles were observed with both non-core–shell and core–shell structures, which were formed during multiple-stage precipitations, in an Al–Mg–Er alloy. After fatigue deformations, the average size of the non-core–shell structured precipitates increased significantly. By tracing the same precipitate particles before and after a high-cycle fatigue test, quasi-in situ electron microscopy revealed that the increase of average particle size is associated with the substantial dissolution of small non-core–shell structured Al3(Er, Zr) particles, whose diameters are generally less than 15 nm, and a consequent growth of larger non-core–shell Al3(Er, Zr) precipitates. On the contrary, the core–shell structured Al3(Er, Zr) precipitates remain stable during high-cycle fatigue tests. Possible mechanisms for the dissolution and growth of non-core–shell structured Al3(Er, Zr) precipitates are discussed in terms of particle size, interfacial energy and lattice mismatch, in comparison to the stable core–shell structured precipitates

  5. Finding immune gene expression differences induced by marine bacterial pathogens in the Deep-sea hydrothermal vent mussel Bathymodiolus azoricus

    Science.gov (United States)

    Martins, E.; Queiroz, A.; Serrão Santos, R.; Bettencourt, R.

    2013-11-01

    The deep-sea hydrothermal vent mussel Bathymodiolus azoricus lives in a natural environment characterised by extreme conditions of hydrostatic pressure, temperature, pH, high concentrations of heavy metals, methane and hydrogen sulphide. The deep-sea vent biological systems represent thus the opportunity to study and provide new insights into the basic physiological principles that govern the defense mechanisms in vent animals and to understand how they cope with microbial infections. Hence, the importance of understanding this animal's innate defense mechanisms, by examining its differential immune gene expressions toward different pathogenic agents. In the present study, B. azoricus mussels were infected with single suspensions of marine bacterial pathogens, consisting of Vibrio splendidus, Vibrio alginolyticus, or Vibrio anguillarum, and a pool of these Vibrio bacteria. Flavobacterium suspensions were also used as a non-pathogenic bacterium. Gene expression analyses were carried out using gill samples from infected animals by means of quantitative-Polymerase Chain Reaction aimed at targeting several immune genes. We also performed SDS-PAGE protein analyses from the same gill tissues. We concluded that there are different levels of immune gene expression between the 12 h to 24 h exposure times to various bacterial suspensions. Our results from qPCR demonstrated a general pattern of gene expression, decreasing from 12 h over 24 h post-infection. Among the bacteria tested, Flavobacterium is the bacterium inducing the highest gene expression level in 12 h post-infections animals. The 24 h infected animals revealed, however, greater gene expression levels, using V. splendidus as the infectious agent. The SDS-PAGE analysis also pointed at protein profile differences between 12 h and 24 h, particularly evident for proteins of 18-20 KDa molecular mass, where most dissimilarity was found. Multivariate analyses demonstrated that immune genes, as well as experimental

  6. Promoting Ti4C2S2 strain induced precipitation during asymmetrical hot rolling to improve r value and advantaged texture in Ti stabilized IF steel

    International Nuclear Information System (INIS)

    Highlights: • We study Ti4C2S2 strain induced precipitation in Ti stabilized IF steel. • The PTT diagram is obtained by plotting 1/Ar–time curves. • Hot rolling at the nose of Ps line effectively promotes Ti4C2S2 precipitation. • Annealed sheet with promoted Ti4C2S2 exhibits higher r value and stronger γ fiber texture. • Adverse impact of tiny TiC has been significantly mitigated. - Abstract: The kinetic of Ti4C2S2 strain induced precipitation in a Ti stabilized IF steel was investigated using two stage interrupted compression test with high true strain (0.5). The PTT (precipitation–time–temperature) diagram was obtained by plotting 1/Ar–time curves. TEM (transmission electron microscopy) observation confirmed that the evolution of Ti4C2S2 precipitate in the quenched samples of thermal simulation is in good agreement with the PTT diagram. Hot strips were produced at three different rolling temperatures with high strain and slight shear deformation. It was found that hot rolling at the nose temperature of the Ps line of the PTT diagram can effectively promote the precipitation of Ti4C2S2 and retard the precipitation of TiC. Cold rolled and annealed sheets from hot strip containing higher volume fraction of Ti4C2S2 exhibited higher r value and stronger γ fiber texture with equal {1 1 1}〈1 1 2〉 and {1 1 1}〈1 1 0〉 components. By contrast, cold rolled and annealed sheets from hot strips containing lower volume fraction of Ti4C2S2 represented lower r values and weaker γ fiber texture with significant drops from {1 1 1}〈1 1 2〉 to {1 1 1}〈1 1 0〉 component

  7. Murine lymphoid procoagulant activity induced by bacterial lipopolysaccharide and immune complexes is a monocyte prothrombinase

    OpenAIRE

    Schwartz, BS; Levy, GA; Fair, DS; Edgington, TS

    1982-01-01

    Murine lymphoid cells respond rapidly to bacterial lipopolysaccharide or antigen-antibody complexes to initiate or accelerate the blood coagulation pathways. The monocyte or macrophage has been identified as the cellular source, although lymphocyte collaboration is required for the rapid induction of the procoagulant response. This procoagulant activity is identified in the present study as a direct prothrombin activator, i.e., a prothrombinase. Studies with plasmas deficient in single coagul...

  8. NaOH-Debittering Induces Changes in Bacterial Ecology during Table Olives Fermentation

    OpenAIRE

    Cocolin, Luca; Alessandria, Valentina; Botta, Cristian; Gorra, Roberta; De Filippis, Francesca; Ercolini, Danilo; Rantsiou, Kalliopi

    2013-01-01

    Limited information is available on the impact of the NaOH treatment on table olive fermentations, and for this reason a polyphasic approach has been adopted here to investigate its effect on the fermentation dynamics and bacterial biodiversity. The microbial counts of the main groups involved in the transformation have not shown any differences, apart from a more prompt start of the fermentation when the olives were subjected to the NaOH treatment. The data produced by culture-independent an...

  9. Macroalgal Extracts Induce Bacterial Assemblage Shifts and Sublethal Tissue Stress in Caribbean Corals

    OpenAIRE

    Morrow, Kathleen M.; Raphael Ritson-Williams; Cliff Ross; Mark R Liles; Paul, Valerie J

    2012-01-01

    Benthic macroalgae can be abundant on present-day coral reefs, especially where rates of herbivory are low and/or dissolved nutrients are high. This study investigated the impact of macroalgal extracts on both coral-associated bacterial assemblages and sublethal stress response of corals. Crude extracts and live algal thalli from common Caribbean macroalgae were applied onto the surface of Montastraea faveolata and Porites astreoides corals on reefs in both Florida and Belize. Denaturing grad...

  10. Induced Bacterial Cross-Resistance toward Host Antimicrobial Peptides: A Worrying Phenomenon

    OpenAIRE

    Fleitas, Osmel; Franco, Octávio L.

    2016-01-01

    Bacterial resistance to conventional antibiotics has reached alarming levels, threatening to return to the pre-antibiotic era. Therefore, the search for new antimicrobial compounds that overcome the resistance phenomenon has become a priority. Antimicrobial peptides (AMPs) appear as one of the most promising antibiotic medicines. However, in recent years several AMP-resistance mechanisms have been described. Moreover, the AMP-resistance phenomenon has become more complex due to its associatio...

  11. Inducible Resistance of Fish Bacterial Pathogens to the Antimicrobial Peptide Cecropin B▿

    OpenAIRE

    Sallum, Ulysses W.; Chen, Thomas T

    2008-01-01

    Cecropin B is a cationic antimicrobial peptide originally isolated from the diapausing pupae of the giant silk moth, Hylphora cecropia. Cecropin B elicits its antimicrobial effects through disruption of the anionic cell membranes of gram-negative bacteria. Previous work by our laboratory demonstrated that a constitutively expressed cecropin B transgene conferred enhanced resistance to bacterial infection in medaka. The development of antibiotic resistance by pathogenic bacteria is a growing p...

  12. Surviving Bacterial Sibling Rivalry: Inducible and Reversible Phenotypic Switching in Paenibacillus dendritiformis

    OpenAIRE

    Be’er, Avraham; Florin, E.-L.; Fisher, Carolyn R; Swinney, Harry L.; Payne, Shelley M.

    2011-01-01

    IMPORTANCE In favorable environments, species may face space and nutrient limits due to overcrowding. Bacteria provide an excellent model for analyzing principles underlying overcrowding and regulation of density in nature, since their population dynamics can be easily and accurately assessed under controlled conditions. We describe a newly discovered mechanism for survival of a bacterial population during overcrowding. When competing with sibling colonies, Paenibacillus dendritiformis produc...

  13. Oral mucosal lipids are antibacterial against Porphyromonas gingivalis, induce ultrastructural damage, and alter bacterial lipid and protein compositions

    Institute of Scientific and Technical Information of China (English)

    Carol L Fischer; Katherine S Walters; David R Drake; Deborah V Dawson; Derek R Blanchette; Kim A Brogden; Philip W Wertz

    2013-01-01

    Oral mucosal and salivary lipids exhibit potent antimicrobial activity for a variety of Gram-positive and Gram-negative bacteria;however, little is known about their spectrum of antimicrobial activity or mechanisms of action against oral bacteria. In this study, we examine the activity of two fatty acids and three sphingoid bases against Porphyromonas gingivalis, an important colonizer of the oral cavity implicated in periodontitis. Minimal inhibitory concentrations, minimal bactericidal concentrations, and kill kinetics revealed variable, but potent, activity of oral mucosal and salivary lipids against P. gingivalis, indicating that lipid structure may be an important determinant in lipid mechanisms of activity against bacteria, although specific components of bacterial membranes are also likely important. Electron micrographs showed ultrastructural damage induced by sapienic acid and phytosphingosine and confirmed disruption of the bacterial plasma membrane. This information, coupled with the association of treatment lipids with P. gingivalis lipids revealed via thin layer chromatography, suggests that the plasma membrane is a likely target of lipid antibacterial activity. Utilizing a combination of two-dimensional in-gel electrophoresis and Western blot followed by mass spectroscopy and N-terminus degradation sequencing we also show that treatment with sapienic acid induces upregulation of a set of proteins comprising a unique P. gingivalis stress response, including proteins important in fatty acid biosynthesis, metabolism and energy production, protein processing, cell adhesion and virulence. Prophylactic or therapeutic lipid treatments may be beneficial for intervention of infection by supplementing the natural immune function of endogenous lipids on mucosal surfaces.

  14. Inducible expression of p50 from TMV for increased resistance to bacterial crown gall disease in tobacco.

    Science.gov (United States)

    Niemeyer, Julia; Ruhe, Jonas; Machens, Fabian; Stahl, Dietmar J; Hehl, Reinhard

    2014-01-01

    The dominant tobacco mosaic virus (TMV) resistance gene N induces a hypersensitive response upon TMV infection and protects tobacco against systemic spread of the virus. It has been proposed to change disease resistance specificity by reprogramming the expression of resistance genes or their corresponding avirulence genes. To reprogramme the resistance response of N towards bacterial pathogens, the helicase domain (p50) of the TMV replicase, the avirulence gene of N, was linked to synthetic promoters 4D and 2S2D harbouring elicitor-responsive cis-elements. These promoter::p50 constructs induce local necrotic lesions on NN tobacco plants in an Agrobacterium tumefaciens infiltration assay. A tobacco genotype void of N (nn) was transformed with the promoter::p50 constructs and subsequently crossed to NN plants. Nn F1 offspring selected for the T-DNA develop normally under sterile conditions. After transfer to soil, some of the F1 plants expressing the 2S2D::p50 constructs develop spontaneous necrosis. Transgenic Nn F1 plants with 4D::p50 and 2S2D::p50 expressing constructs upregulate p50 transcription and induce local necrotic lesions in an A. tumefaciens infiltration assay. When leaves and stems of Nn F1 offspring harbouring promoter::p50 constructs are infected with oncogenic A. tumefaciens C58, transgenic lines harbouring the 2S2D::p50 construct induce necrosis and completely lack tumor development. These results demonstrate a successful reprogramming of the viral N gene response against bacterial crown gall disease and highlight the importance of achieving tight regulation of avirulence gene expression and the control of necrosis in the presence of the corresponding resistance gene. PMID:23955710

  15. ST2 negatively regulates TLR2 signaling, but is not required for bacterial lipoprotein-induced tolerance.

    LENUS (Irish Health Repository)

    Liu, Jinghua

    2010-05-15

    Activation of TLR signaling is critical for host innate immunity against bacterial infection. Previous studies reported that the ST2 receptor, a member of the Toll\\/IL-1 receptor superfamily, functions as a negative regulator of TLR4 signaling and maintains LPS tolerance. However, it is undetermined whether ST2 negatively regulates TLR2 signaling and furthermore, whether a TLR2 agonist, bacterial lipoprotein (BLP)-induced tolerance is dependent on ST2. In this study, we show that BLP stimulation-induced production of proinflammatory cytokines and immunocomplex formation of TLR2-MyD88 and MyD88-IL-1R-associated kinase (IRAK) were significantly enhanced in ST2-deficient macrophages compared with those in wild-type controls. Furthermore, overexpression of ST2 dose-dependently attenuated BLP-induced NF-kappaB activation, suggesting a negative regulatory role of ST2 in TLR2 signaling. A moderate but significantly attenuated production of TNF-alpha and IL-6 on a second BLP stimulation was observed in BLP-pretreated, ST2-deficient macrophages, which is associated with substantially reduced IRAK-1 protein expression and downregulated TLR2-MyD88 and MyD88-IRAK immunocomplex formation. ST2-deficient mice, when pretreated with a nonlethal dose of BLP, benefitted from an improved survival against a subsequent lethal BLP challenge, indicating BLP tolerance develops in the absence of the ST2 receptor. Taken together, our results demonstrate that ST2 acts as a negative regulator of TLR2 signaling, but is not required for BLP-induced tolerance.

  16. Precipitation trends over the Korean peninsula: typhoon-induced changes and a typology for characterizing climate-related risk

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Jong-Suk [School of Energy and Environment, City University of Hong Kong, Hong Kong, People' s Republic of China (China); Jain, Shaleen, E-mail: shaleen.jain@maine.edu [Department of Civil and Environmental Engineering, University of Maine, Orono, ME 04469-5711 (United States)

    2011-07-15

    Typhoons originating in the west Pacific are major contributors to climate-related risk over the Korean peninsula. The current perspective regarding improved characterization of climatic risk and the projected increases in the intensity, frequency, duration, and power dissipation of typhoons during the 21st century in the western North Pacific region motivated a reappraisal of historical trends in precipitation. In this study, trends in the magnitude and frequency of seasonal precipitation in the five major river basins in Korea are analyzed on the basis of a separation analysis, with recognition of moisture sources (typhoon and non-typhoon). Over the 1966-2007 period, typhoons accounted for 21-26% of seasonal precipitation, with the largest values in the Nakdong River Basin. Typhoon-related precipitation events have increased significantly over portions of Han, Nakdong, and Geum River Basins. Alongside broad patterns toward increases in the magnitude and frequency of precipitation, distinct patterns of trends in the upper and lower quartiles (corresponding to changes in extreme events) are evident. A trend typology-spatially resolved characterization of the combination of shifts in the upper and lower tails of the precipitation distribution-shows that a number of sub-basins have undergone significant changes in one or both of the tails of the precipitation distribution. This broader characterization of trends illuminates the relative role of causal climatic factors and an identification of 'hot spots' likely to experience high exposure to typhoon-related climatic extremes in the future.

  17. Precipitation trends over the Korean peninsula: typhoon-induced changes and a typology for characterizing climate-related risk

    International Nuclear Information System (INIS)

    Typhoons originating in the west Pacific are major contributors to climate-related risk over the Korean peninsula. The current perspective regarding improved characterization of climatic risk and the projected increases in the intensity, frequency, duration, and power dissipation of typhoons during the 21st century in the western North Pacific region motivated a reappraisal of historical trends in precipitation. In this study, trends in the magnitude and frequency of seasonal precipitation in the five major river basins in Korea are analyzed on the basis of a separation analysis, with recognition of moisture sources (typhoon and non-typhoon). Over the 1966-2007 period, typhoons accounted for 21-26% of seasonal precipitation, with the largest values in the Nakdong River Basin. Typhoon-related precipitation events have increased significantly over portions of Han, Nakdong, and Geum River Basins. Alongside broad patterns toward increases in the magnitude and frequency of precipitation, distinct patterns of trends in the upper and lower quartiles (corresponding to changes in extreme events) are evident. A trend typology-spatially resolved characterization of the combination of shifts in the upper and lower tails of the precipitation distribution-shows that a number of sub-basins have undergone significant changes in one or both of the tails of the precipitation distribution. This broader characterization of trends illuminates the relative role of causal climatic factors and an identification of 'hot spots' likely to experience high exposure to typhoon-related climatic extremes in the future.

  18. Ion-implantation/annealing-induced precipitation of nanophase ferromagnetic particles in yttrium-stabilized ZrO2

    International Nuclear Information System (INIS)

    Ion implantation and thermal processing techniques have been used to form embedded ferromagnetic nanophase precipitates and thereby create magneto-optically active near-surface regions on otherwise inactive materials. Ferromagnetic precipitates were formed by first implanting Fe+ or Ni+ into Y0.15Zr0.85O1.93 (YSZ) with an implant energy of 140 keV, a fluence of 8.0 x 1016 ions/cm2, and at a temperature of -189 C. After implantation, the specimens were annealed at temperatures ranging from 500 to 1100 C in several types of reducing atmospheres. X-ray diffraction and TEM analysis of the Fe- or Ni-implanted/annealed specimens revealed that crystallographically coherent precipitates of metallic α-Fe, magnetite (Fe3O4), or Ni could be formed in YSZ depending on the annealing conditions. In particular, the cooling rate was established as the critical factor that determined whether Fe or Fe3O4 precipitates were created. Magneto-optical effects arising from ferromagnetic precipitates of Fe, Fe3O4, and Ni in the near-surface region of YSZ were observed and characterized using magnetic circular dichroism (MCD). The magneto-optical response of the α-Fe, Fe3O4, and Ni precipitates was markedly different as indicated by the MCD-detected hysteresis curves. The precipitation mechanism, the chemical nature of the precipitates, and the particle-size distributions resulting from different annealing conditions were investigated and correlated with the precipitate magneto-optical properties

  19. 自修复混凝土中微生物矿化方解石的形成机理%Mechanism of Microbially Induced Calcite Precipitation in Self-healing Concrete

    Institute of Scientific and Technical Information of China (English)

    钱春香; 罗勉; 潘庆峰; 李瑞阳

    2013-01-01

    分别从矿化产物、pH值、O2、底物4个方面对用于混凝土裂缝自修复的微生物矿化形成方解石机理进行了研究.结果表明:混凝土裂缝自修复细菌矿化产物为方解石型CaCO3,矿化过程需要O2参与;细菌生长过程中pH值从7.0逐渐升高到8.3,碱性环境在细菌矿化过程中起重要作用;CaCO3不是由底物在胞外酶作用下直接分解而得,而是需要经过细菌一系列代谢转换,代谢过程中产生CO2,底物既提供矿化所需的Ca2+源,也提供CO2=来源,其他有机营养物质也可提供CO32-.同时,对该菌株的矿化机理进行了分析,结果表明:细菌生长繁殖过程中创造碱性环境,产生CO2,细菌细胞表面带负电荷,能够吸附Ca2+并作为成核位点,在碱性环境下CO2与Ca2+反应形成CaCO3晶体.%The process of microbially induced calcite precipitation was investigated via the control of mineralization production, pH value, O2 and substrate, respectively. The experimental results show that the mineral precipitation induced by bacteria is calcite crystal, and the mineralization process needs O2. The pH value of bacteria liquid increased from 7.0 to 8.3 gradually when the bacteria grew, which plays an important role in the bacteria mineralization process. Calcite was formed due to the bacterial metabolic conversions rather than the direct decomposition of substrate under the action of extracellular enzymes. The metabolic process produced CO2, the substrate provided Ca2+ and CO32-, and other organic nutrients could also provide CO32-. The possible mechanism of bacterial induced mineral precipitation was analyzed. The results show that the growth of bacteria creates an alkaline environment and produces CO2 through various physiological activities. The cell wall of bacteria was negatively charged, affecting calcium carbonate precipitation by acting as sites of nucleation or calcium enrichment. The produced CO2 molecules reacted with Ca2+ to form calcite

  20. New approach for modelling strain induced precipitation of Nb(C,N) in HSLA steels during multipass hot deformation in austenite

    OpenAIRE

    Nagarajan, V.; Palmiere, E.J.; Sellars, C.M.

    2009-01-01

    A new model for strain induced precipitation of Nb(C,N) is developed from the existing model for single pass hot deformation. This new model can be extended to multipass deformation to explain the microstructural evolution during the hot deformation of Nb supersaturated high strength low alloy (HSLA) steels. The key feature of this model is the microband geometry employed, which leads to determination of the local solute concentration at microbands, and hence the potential for carbonitride pr...

  1. Bacterially Induced Dolomite Formation in the Presence of Sulfate Ions under Aerobic Conditions

    Science.gov (United States)

    Sanchez-Roman, M.; McKenzie, J. A.; Vasconcelos, C.; Rivadeneyra, M.

    2005-12-01

    The origin of dolomite remains a long-standing enigma in sedimentary geology because, although thermodynamically favorable, precipitation of dolomite from modern seawater does not occur. Experiments conducted at elevated temperatures (200 oC) indicated that the presence of small concentrations of sulfate ions inhibits the transformation of calcite to dolomite [1]. Indeed, sulfate ions appeared to inhibit dolomite formation above 2 mM concentration (versus 28 mM in modern seawater). Recently, culture experiments have demonstrated that sulfate-reducing bacteria mediate the precipitation of dolomite at Earth surface conditions in the presence of sustained sulfate ion concentrations [2,3]. Additionally, in a number of modern hypersaline environments, dolomite forms from solutions with high sulfate ion concentrations (2 to 70 times seawater). These observations suggest that the experimentally observed sulfate-ion inhibition [1] may not apply to all ancient dolomite formation. Here, we report aerobic culture experiments conducted at low temperatures (25 and 35 oC) and variable sulfate ion concentrations (0, 0.5, 1 and 2 x seawater values) using moderately halophilic bacteria, Halomonas meridiana. After an incubation period of 15 days, experiments at 35 oC with variable sulfate ion concentrations (0, 0.5 x and seawater values) contained crystals of Ca-dolomite and stochiometric dolomite. The experiment at 35 oC with 2 x seawater sulfate ion concentration produced dolomite crystals after 20 days of incubation. In a parallel set of experiments at 25 oC, precipitation of dolomite was observed after 25 days of incubation in cultures with variable sulfate ion concentrations (0, 0.5 x and seawater values). In the culture with 2 x seawater sulfate ion concentration, dolomite crystals were observed after 30 days. Our study demonstrates that halophilic bacteria (or heterotrophic microorganisms), which do not require sulfate ions for metabolism, can mediate dolomite precipitation

  2. EXAFS study on solute precipitation in FeCu alloy induced by energetic electron bombardments and thermal aging

    International Nuclear Information System (INIS)

    The extended X-ray absorption fine structure (EXAFS) measurement is a useful tool for the observation of local atomic arrangements around selected atoms. We performed EXAFS measurements for the electron-irradiated and the thermally-aged Fe–0.6 wt.% Cu alloy and compared the experimental result with that of the simulation by the FEFF simulation code in order to investigate the local atomic structure around Cu atoms. Cu precipitates which were produced by the thermal aging at 773 K transformed from the bcc structure to the fcc structure as the precipitates grow large enough. However, for electron-irradiated specimens, although the hardness greatly increased, the transformation of Cu precipitates from the bcc to the fcc structure was not clearly confirmed. This result indicates that small sized Cu precipitates which had the bcc structure were produced by the electron irradiation and they could hardly coarsen during the irradiation

  3. Summer precipitation anomalies in Asia and North America induced by Eurasian non-monsoon land heating versus ENSO

    Science.gov (United States)

    Zhao, Ping; Wang, Bin; Liu, Jiping; Zhou, Xiuji; Chen, Junming; Nan, Sulan; Liu, Ge; Xiao, Dong

    2016-02-01

    When floods ravage Asian monsoon regions in summer, megadroughts often attack extratropical North America, which feature an intercontinental contrasting precipitation anomaly between Asia and North America. However, the characteristics of the contrasting Asian-North American (CANA) precipitation anomalies and associated mechanisms have not been investigated specifically. In this article, we firmly establish this summer CANA pattern, providing evidence for a significant effect of the land surface thermal forcing over Eurasian non-monsoon regions on the CANA precipitation anomalies by observations and numerical experiments. We show that the origin of the CANA precipitation anomalies and associated anomalous anticyclones over the subtropical North Pacific and Atlantic has a deeper root in Eurasian non-monsoon land surface heating than in North American land surface heating. The ocean forcing from the ENSO is secondary and tends to be confined in the tropics. Our results have strong implications to interpretation of the feedback of global warming on hydrological cycle over Asia and North America. Under the projected global warming due to the anthropogenic forcing, the prominent surface warming over Eurasian non-monsoon regions is a robust feature which, through the mechanism discussed here, would favor a precipitation increase over Asian monsoon regions and a precipitation decrease over extratropical North America.

  4. Summer precipitation anomalies in Asia and North America induced by Eurasian non-monsoon land heating versus ENSO.

    Science.gov (United States)

    Zhao, Ping; Wang, Bin; Liu, Jiping; Zhou, Xiuji; Chen, Junming; Nan, Sulan; Liu, Ge; Xiao, Dong

    2016-01-01

    When floods ravage Asian monsoon regions in summer, megadroughts often attack extratropical North America, which feature an intercontinental contrasting precipitation anomaly between Asia and North America. However, the characteristics of the contrasting Asian-North American (CANA) precipitation anomalies and associated mechanisms have not been investigated specifically. In this article, we firmly establish this summer CANA pattern, providing evidence for a significant effect of the land surface thermal forcing over Eurasian non-monsoon regions on the CANA precipitation anomalies by observations and numerical experiments. We show that the origin of the CANA precipitation anomalies and associated anomalous anticyclones over the subtropical North Pacific and Atlantic has a deeper root in Eurasian non-monsoon land surface heating than in North American land surface heating. The ocean forcing from the ENSO is secondary and tends to be confined in the tropics. Our results have strong implications to interpretation of the feedback of global warming on hydrological cycle over Asia and North America. Under the projected global warming due to the anthropogenic forcing, the prominent surface warming over Eurasian non-monsoon regions is a robust feature which, through the mechanism discussed here, would favor a precipitation increase over Asian monsoon regions and a precipitation decrease over extratropical North America. PMID:26916258

  5. Cadmium Bio sorption by Some Bacterial Isolates and Their Mutants Induced by gamma Radiation

    International Nuclear Information System (INIS)

    Cadmium bio sorption by bacterial cells is recognized as a potential alternative to existing recovery technologies. Bacterial strains under investigation were isolated from air surrounding gamma industrial facility Co 60 source of the NCRRT, Cairo. The effect of different concentrations of cadmium on the growth was determined for the spore forming bacteria B.coagulans, B.megaterium, B.pumilus, B.pantothenticus, and also for Staphylo coccus aureus, the reference standard strain used in these study for comparison was B.subtilis MERK 10646. The results indicated that, B.pantothenticus was the most tolerant isolate, and it can resist up to 400 ppm. Cadmium capacity for B.subtilis parent strain was increased through the influence of different doses of gamma radiation, selected mutant of B.subtilis show enhanced level of cadmium accumulation. The effect of environmental parameters as ph, temperature and also the effect of biomass factor on cadmium uptake by B.pantothenticus and B.subtilis (m) was traced

  6. Bacterial gastroenteritis

    Science.gov (United States)

    Infectious diarrhea - bacterial gastroenteritis; Acute gastroenteritis; Gastroenteritis - bacterial ... Bacterial gastroenteritis can affect 1 person or a group of people who all ate the same food. It is ...

  7. A membrane-bound matrix-metalloproteinase from Nicotiana tabacum cv. BY-2 is induced by bacterial pathogens

    Directory of Open Access Journals (Sweden)

    Wahner Verena

    2009-06-01

    Full Text Available Abstract Background Plant matrix metalloproteinases (MMP are conserved proteolytic enzymes found in a wide range of monocotyledonous and dicotyledonous plant species. Acting on the plant extracellular matrix, they play crucial roles in many aspects of plant physiology including growth, development and the response to stresses such as pathogen attack. Results We have identified the first tobacco MMP, designated NtMMP1, and have isolated the corresponding cDNA sequence from the tobacco suspension cell line BY-2. The overall domain structure of NtMMP1 is similar to known MMP sequences, although certain features suggest it may be constitutively active rather than dependent on proteolytic processing. The protein appears to be expressed in two forms with different molecular masses, both of which are enzymatically active as determined by casein zymography. Exchanging the catalytic domain of NtMMP1 with green fluorescent protein (GFP facilitated subcellular localization by confocal laser scanning microscopy, showing the protein is normally inserted into the plasma membrane. The NtMMP1 gene is expressed constitutively at a low level but can be induced by exposure to bacterial pathogens. Conclusion Our biochemical analysis of NtMMP1 together with bioinformatic data on the primary sequence indicate that NtMMP1 is a constitutively-active protease. Given its induction in response to bacterial pathogens and its localization in the plasma membrane, we propose a role in pathogen defense at the cell periphery.

  8. Procalcitonin neutralizes bacterial LPS and reduces LPS-induced cytokine release in human peripheral blood mononuclear cells

    Directory of Open Access Journals (Sweden)

    Matera Giovanni

    2012-05-01

    Full Text Available Abstract Background Procalcitonin (PCT is a polypeptide with several cationic aminoacids in its chemical structure and it is a well known marker of sepsis. It is now emerging that PCT might exhibit some anti-inflammatory effects. The present study, based on the evaluation of the in vitro interaction between PCT and bacterial lipopolisaccharide (LPS, reports new data supporting the interesting and potentially useful anti-inflammatory activity of PCT. Results PCT significantly decreased (p Salmonella typhimurium (rough chemotype and Escherichia coli (smooth chemotype. Subsequently, the in vitro effects of PCT on LPS-induced cytokine release were studied in human peripheral blood mononuclear cells (PBMC. When LPS was pre-incubated for 30 minutes with different concentrations of PCT, the release of interleukin-10 (IL-10 and tumor necrosis factor alpha (TNFα by PBMC decreased in a concentration-dependent manner after 24 hours for IL-10 and 4 hours for TNFα. The release of monocyte chemotactic protein-1 (MCP-1 exhibited a drastic reduction at 4 hours for all the PCT concentrations assessed, whereas such decrease was concentration-dependent after 24 hours. Conclusions This study provides the first evidence of the capability of PCT to directly neutralize bacterial LPS, thus leading to a reduction of its major inflammatory mediators.

  9. Long-term Hg pollution-induced structural shifts of bacterial community in the terrestrial isopod (Porcellio scaber) gut

    Energy Technology Data Exchange (ETDEWEB)

    Lapanje, Ales, E-mail: ales@ifb.s [Institute of Physical Biology, Ljubljana (Slovenia); Zrimec, Alexis [Institute of Physical Biology, Ljubljana (Slovenia); Drobne, Damjana [Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana (Slovenia); Rupnik, Maja [Institute of Public Health Maribor, Maribor (Slovenia)

    2010-10-15

    In previous studies we detected lower species richness and lower Hg sensitivity of the bacteria present in egested guts of Porcellio scaber (Crustacea, Isopoda) from chronically Hg polluted than from unpolluted environment. Basis for such results were further investigated by sequencing of 16S rRNA genes of mercury-resistant (Hg{sup r}) isolates and clone libraries. We observed up to 385 times higher numbers of Hg{sup r} bacteria in guts of animals from polluted than from unpolluted environment. The majority of Hg{sup r} strains contained merA genes. Sequencing of 16S rRNA clones from egested guts of animals from Hg-polluted environments showed elevated number of bacteria from Pseudomonas, Listeria and Bacteroidetes relatives groups. In animals from pristine environment number of bacteria from Achromobacter relatives, Alcaligenes, Paracoccus, Ochrobactrum relatives, Rhizobium/Agrobacterium, Bacillus and Microbacterium groups were elevated. Such bacterial community shifts in guts of animals from Hg-polluted environment could significantly contribute to P. scaber Hg tolerance. - Chronic environmental mercury pollution induces bacterial community shifts and presence of elevated number as well as increased diversity of Hg-resistant bacteria in guts of isopods.

  10. Effect of acidic electrolyzed water-induced bacterial inhibition and injury in live clam (Venerupis philippinarum) and mussel (Mytilus edulis).

    Science.gov (United States)

    Al-Qadiri, Hamzah M; Al-Holy, Murad A; Shiroodi, Setareh Ghorban; Ovissipour, Mahmoudreza; Govindan, Byju N; Al-Alami, Nivin; Sablani, Shyam S; Rasco, Barbara

    2016-08-16

    The effect of acidic electrolyzed water (AEW) on inactivating Escherichia coli O104:H4, Listeria monocytogenes, Aeromonas hydrophila, Vibrio parahaemolyticus and Campylobacter jejuni in laboratory contaminated live clam (Venerupis philippinarum) and mussel (Mytilus edulis) was investigated. The initial levels of bacterial contamination were: in clam 4.9 to 5.7log10CFU/g, and in mussel 5.1 to 5.5log10CFU/g. Two types of AEW were used for treatment time intervals of 1 and 2h: strong (SAEW) with an available chlorine concentration (ACC) of 20mg/L, pH=3.1, and an oxidation-reduction potential (ORP) of 1150mV, and weak (WAEW) at ACC of 10mg/L, pH=3.55 and ORP of 950mV. SAEW and WAEW exhibited significant inhibitory activity against inoculated bacteria in both shellfish species with significant differences compared to saline solutions treatments (1-2% NaCl) and untreated controls (0h). SAEW showed the largest inhibitory activity, the extent of reduction (log10CFU/g) ranged from 1.4-1.7 for E. coli O104:H4; 1.0-1.6 for L. monocytogenes; 1.3-1.6 for A. hydrophila; 1.0-1.5 for V. parahaemolyticus; and 1.5-2.2 for C. jejuni in both types of shellfish. In comparison, significantly (Pmonocytogenes; 0.6-1.3 for A. hydrophila; 0.7-1.3 for V. parahaemolyticus; and 0.8-1.9 for C. jejuni in both types of shellfish. Among all bacterial strains examined in this study, AEW induced less bacterial injury (~0.1-1.0log10CFU/g) and more inactivation effect. This study revealed that AEW (10-20mg/L ACC) could be used to reduce bacterial contamination in live clam and mussel, which may help control possible unhygienic practices during production and processing of shellfish without apparent changes in the quality of the shellfish. PMID:27208583

  11. A novel multi-stage subunit vaccine against paratuberculosis induces significant immunity and reduces bacterial burden in tissues (P4304)

    DEFF Research Database (Denmark)

    Thakur, Aneesh; Aagaard, Claus; Riber, Ulla; Skovgaard, Kerstin; Andersen, Peter; Jungersen, Gregers

    Effective control of paratuberculosis is hindered by lack of a vaccine preventing infection, transmission and without diagnostic interference with tuberculosis. We have developed a novel multi-stage recombinant subunit vaccine in which a fusion of four early expressed MAP antigens is combined with...... followed for a year. The FET11 vaccine induced a significant T cell response against constituent vaccine proteins characterized by a high percentage of CD4+ T cells and participation of polyfunctional CD4+ T cells. Of the two different age groups, late FET11 vaccination conferred protective immunity...... characterized by a significant containment of bacterial burden in gut tissues compared to non-vaccinated animals. There was no cross-reaction with bovine tuberculosis in vaccinated animals. This novel multi-stage vaccine has the potential to become a marker vaccine for paratuberculosis....

  12. Carbon dioxide and hydrogen sulfide associations with regional bacterial diversity patterns in microbially induced concrete corrosion.

    Science.gov (United States)

    Ling, Alison L; Robertson, Charles E; Harris, J Kirk; Frank, Daniel N; Kotter, Cassandra V; Stevens, Mark J; Pace, Norman R; Hernandez, Mark T

    2014-07-01

    The microbial communities associated with deteriorating concrete corrosion fronts were characterized in 35 samples taken from wastewater collection and treatment systems in ten utilities. Bacterial communities were described using Illumina MiSeq sequencing of the V1V2 region of the small subunit ribosomal ribonucleic acid (SSU-rRNA) gene recovered from fresh corrosion products. Headspace gas concentrations (hydrogen sulfide, carbon dioxide, and methane), pore water pH, moisture content, and select mineralogy were tested for correlation to community outcomes and corrosion extent using pairwise linear regressions and canonical correspondence analysis. Corroding concrete was most commonly characterized by moisture contents greater than 10%, pore water pH below one, and limited richness (100 ppm) and carbon dioxide (>1%) gases, conditions which also were associated with low diversity biofilms dominated by members of the acidophilic sulfur-oxidizer genus Acidithiobacillus. PMID:24842376

  13. Bacterial lipopolysaccharide induces osteoclast formation in RAW 264.7 macrophage cells

    International Nuclear Information System (INIS)

    Lipopolysaccharide (LPS) is a potent bone resorbing factor. The effect of LPS on osteoclast formation was examined by using murine RAW 264.7 macrophage cells. LPS-induced the formation of multinucleated giant cells (MGC) in RAW 264.7 cells 3 days after the exposure. MGCs were positive for tartrate-resistant acid phosphatase (TRAP) activity. Further, MGC formed resorption pits on calcium-phosphate thin film that is a substrate for osteoclasts. Therefore, LPS was suggested to induce osteoclast formation in RAW 264.7 cells. LPS-induced osteoclast formation was abolished by anti-tumor necrosis factor (TNF)-α antibody, but not antibodies to macrophage-colony stimulating factor (M-CSF) and receptor activator of nuclear factor (NF)-κB ligand (RANKL). TNF-α might play a critical role in LPS-induced osteoclast formation in RAW 264.7 cells. Inhibitors of NF-κB and stress activated protein kinase (SAPK/JNK) prevented the LPS-induced osteoclast formation. The detailed mechanism of LPS-induced osteoclast formation is discussed

  14. Finding immune gene expression differences induced by marine bacterial pathogens in the deep-sea hydrothermal vent mussel Bathymodiolus azoricus

    Directory of Open Access Journals (Sweden)

    R. Bettencourt

    2013-02-01

    Full Text Available The deep-sea hydrothermal vent mussel Bathymodiolus azoricus lives in a natural environment characterized by extreme conditions of hydrostatic pressure, temperature, pH, high concentrations of heavy metals, methane and hydrogen sulphide. The deep-sea vent biological systems represent thus the opportunity to study and provide new insights into the basic physiological principles that govern the defense mechanisms in vent animals and to understand how they cope with microbial infections. Hence, the importance of understanding this animal's innate defense mechanisms, by examining its differential immune gene expressions toward different pathogenic agents. In the present study, B. azoricus mussels were infected with single suspensions of marine bacterial pathogens, consisting of Vibrio splendidus, Vibrio alginolyticus, or Vibrio anguillarum, and a pool of these Vibrio strains. Flavobacterium suspensions were also used as an irrelevant bacterium. Gene expression analyses were carried out using gill samples from animals dissected at 12 h and 24 h post-infection times by means of quantitative-Polymerase Chain Reaction aimed at targeting several immune genes. We also performed SDS-PAGE protein analyses from the same gill tissues. We concluded that there are different levels of immune gene expression between the 12 h and 24 h exposure times to various bacterial suspensions. Our results from qPCR demonstrated a general pattern of gene expression, decreasing from 12 h over 24 h post-infection. Among the bacteria tested, Flavobacterium is the microorganism species inducing the highest gene expression level in 12 h post-infections animals. The 24 h infected animals revealed, however, greater gene expression levels, using V. splendidus as the infectious agent. The SDS-PAGE analysis also pointed at protein profile differences between 12 h and 24 h, particularly around a protein area, of 18 KDa molecular mass, where most dissimilarities were found. Multivariate

  15. The photosensitive effect of Ce on the precipitation of Ag nanoparticles induced by femtosecond laser in silicate glass

    International Nuclear Information System (INIS)

    This paper studies the photosensitive effect of cerium oxide on the precipitation of Ag nanoparticles after femtosecond laser irradiating into silicate glass and successive annealing. Spectroscopy analysis and diffraction efficiency measurements show that the introduction of cerium oxide may increase the concentration of Ag atoms in the femtosecond laser-irradiated regions resulting from the photoreduction reaction Ce3+ + Ag+ → Ce4+ + Ag0 via multiphoton excitation. These results promote the aggregation of Ag nanoparticles during the annealing process. It is also found that different concentrations of cerium oxide may influence the Ag nanoparticle precipitation in the corresponding glass. (classical areas of phenomenology)

  16. Genetic analysis of the induced mutants of rice resistant to bacterial leaf blight

    International Nuclear Information System (INIS)

    Full text: Seeds of the rice cultivar 'Harebare', which is susceptible to bacterial leaf blight (BLB), were treated with thermal neutrons, gamma-rays, ethyleneimine and ethylmethane-sulfonate. In the M2, plants with better resistance to BLB were identified through inoculation at the seedling and the flag leaf stages with an isolate (T7174) of the Japanese differential race I. Several mutant lines resistant to BLB were selected through tests of the M3 or M4 lines derived from selected resistant M2 plants. The frequency of resistant mutants was significantly higher after the thermal neutron treatment than after treatments with other mutagens. Two mutants, which originated from the neutron treatment, showing a highly quantitative resistance to multiple BLB races were analysed for gene(s) for resistance. The resistance of one of them (M41) to the Japanese races I, II, III, IV, and V was found to be conditioned by a single recessive gene. Three other recessive genes for resistance are known, but their reaction to differential races is different. Therefore, this gene was thought to be new and was tentatively designated as xa-nm(t). The resistance of another mutant (M57) was found to be polygenically inherited. (author)

  17. Influence of temperature and hydrogen content on stress-induced radial hydride precipitation in Zircaloy-4 cladding

    International Nuclear Information System (INIS)

    Radial hydride precipitation in stress relieved Zircaloy-4 fuel claddings is studied using a new thermal–mechanical test. Two maximum temperatures for radial hydride precipitation heat treatment are studied, 350 and 450 °C with hydrogen contents ranging between 50 and 600 wppm. The new test provides two main results of interest: the minimum hoop stress required to precipitate radial hydrides and a maximum stress above which, all hydrides precipitate in the radial direction. Based on these two extreme stress conditions, a model is derived to determine the stress level required to obtain a given fraction of radial hydrides after high temperature thermal–mechanical heat treatment. The proposed model is validated using metallographic observation data on pressurized tubes cooled down under constant pressure. Most of the samples with reoriented hydrides are further subjected to a ductility test. Using finite element modeling, the test results are analyzed in terms of crack nucleation within radial hydrides at the outer diameter and crack growth through the thickness of the tubular samples. The combination of test results shows that samples with hydrogen contents of about 100 wppm had the lowest ductility

  18. Modulation of Jupiter's plasma flow, polar currents, and auroral precipitation by solar wind-induced compressions and expansions of the magnetosphere: a simple theoretical model

    Directory of Open Access Journals (Sweden)

    S. W. H. Cowley

    2007-06-01

    Full Text Available We construct a simple model of the plasma flow, magnetosphere-ionosphere coupling currents, and auroral precipitation in Jupiter's magnetosphere, and examine how they respond to compressions and expansions of the system induced by changes in solar wind dynamic pressure. The main simplifying assumption is axi-symmetry, the system being modelled principally to reflect dayside conditions. The model thus describes three magnetospheric regions, namely the middle and outer magnetosphere on closed magnetic field lines bounded by the magnetopause, together with a region of open field lines mapping to the tail. The calculations assume that the system is initially in a state of steady diffusive outflow of iogenic plasma with a particular equatorial magnetopause radius, and that the magnetopause then moves rapidly in or out due to a change in the solar wind dynamic pressure. If the change is sufficiently rapid (~2–3 h or less the plasma angular momentum is conserved during the excursion, allowing the modified plasma angular velocity to be calculated from the radial displacement of the field lines, together with the modified magnetosphere-ionosphere coupling currents and auroral precipitation. The properties of these transient states are compared with those of the steady states to which they revert over intervals of ~1–2 days. Results are shown for rapid compressions of the system from an initially expanded state typical of a solar wind rarefaction region, illustrating the reduction in total precipitating electron power that occurs for modest compressions, followed by partial recovery in the emergent steady state. For major compressions, however, typical of the onset of a solar wind compression region, a brightened transient state occurs in which super-rotation is induced on closed field lines, resulting in a reversal in sense of the usual magnetosphere-ionosphere coupling current system. Current system reversal results in accelerated auroral

  19. Diurnal variations of summertime precipitation over the Tibetan Plateau in relation to orographically-induced regional circulations

    International Nuclear Information System (INIS)

    The diurnal patterns of variation of summertime precipitation over the Tibetan Plateau were first investigated using the TRMM multi-satellite precipitation analysis product for five summer seasons (i.e. June to August for 2002-2006). Both hourly precipitation amount and precipitation frequency exhibit pronounced daily variability with an overall late-afternoon-evening maximum and a dominant morning minimum. A notable exception is the prevalent nocturnal maximum around the periphery of the Plateau. In terms of the normalized harmonic amplitude, the diurnal signal shows significant regional contrast with the strongest manifestation over the central Plateau and the weakest near the periphery. This remarkable spatial dependence in daily rainfall cycles is clear evidence of orographic and heterogeneous land-surface impacts on convective development. Using six-hourly NCEP FNL data, we then examined the diurnal variability in the atmospheric circulation and thermodynamics in this region. The results show that the Plateau heats (cools) the overlying atmosphere during the day (night) more than the surrounding areas, and as a consequence a relatively stronger confluent circulation in this region occurs during the day than during the night, consistent with the diurnal rainfall cycles. Moreover, the regions with large low-level convergence and upper-level divergence correspond to the strong diurnal rainfall variations. The reversed daily alterations of convergence-divergence patterns in the vicinity of the Plateau edges are in agreement with the observed nighttime rainfall peak therein. This study further demonstrates the importance of the Tibetan Plateau in regulating regional circulation and precipitation.

  20. Use of in vivo-induced antigen technology (IVIAT for the identification of Streptococcus suis serotype 2 in vivo-induced bacterial protein antigens

    Directory of Open Access Journals (Sweden)

    Lu Chengping

    2009-09-01

    Full Text Available Abstract Background Streptococcus suis serotype 2 (SS2 is a zoonotic agent that causes death and disease in both humans and swine. A better understanding of SS2-host molecular interactions is crucial for understanding SS2 pathogenesis and immunology. Conventional genetic and biochemical approaches used to study SS2 virulence factors are unable to take into account the complex and dynamic environmental stimuli associated with the infection process. In this study, in vivo-induced antigen technology (IVIAT, an immunoscreening technique, was used to identify the immunogenic bacterial proteins that are induced or upregulated in vivo during SS2 infection. Results Convalescent-phase sera from pigs infected with SS2 were pooled, adsorbed against in vitro antigens, and used to screen SS2 genomic expression libraries. Upon analysis of the identified proteins, we were able to assign a putative function to 40 of the 48 proteins. These included proteins implicated in cell envelope structure, regulation, molecule synthesis, substance and energy metabolism, transport, translation, and those with unknown functions. The in vivo-induced changes in the expression of 10 of these 40 genes were measured using real-time reverse transcription (RT-PCR, revealing that the expression of 6 of the 10 genes was upregulated in the in vivo condition. The strain distribution of these 10 genes was analyzed by PCR, and they were found in the most virulent SS2 strains. In addition, protein sequence alignments of the newly identified proteins demonstrate that three are putative virulence-associated proteins. Conclusion Collectively, our results suggest that these in vivo-induced or upregulated genes may contribute to SS2 disease development. We hypothesize that the identification of factors specifically induced or upregulated during SS2 infection will aid in our understanding of SS2 pathogenesis and may contribute to the control SS2 outbreaks. In addition, the proteins identified

  1. Modulation of Inducible Nitric Oxide Synthase Expression by the Attaching and Effacing Bacterial Pathogen Citrobacter rodentium in Infected Mice

    Science.gov (United States)

    Vallance, Bruce A.; Deng, Wanyin; De Grado, Myriam; Chan, Crystal; Jacobson, Kevan; Finlay, B. Brett

    2002-01-01

    Citrobacter rodentium belongs to the attaching and effacing family of enteric bacterial pathogens that includes both enteropathogenic and enterohemorrhagic Escherichia coli. These bacteria infect their hosts by colonizing the intestinal mucosal surface and intimately attaching to underlying epithelial cells. The abilities of these pathogens to exploit the cytoskeleton and signaling pathways of host cells are well documented, but their interactions with the host's antimicrobial defenses, such as inducible nitric oxide synthase (iNOS), are poorly understood. To address this issue, we infected mice with C. rodentium and found that iNOS mRNA expression in the colon significantly increased during infection. Immunostaining identified epithelial cells as the major source for immunoreactive iNOS. Finding that nitric oxide (NO) donors were bacteriostatic for C. rodentium in vitro, we examined whether iNOS expression contributed to host defense by infecting iNOS-deficient mice. Loss of iNOS expression caused a small but significant delay in bacterial clearance without affecting tissue pathology. Finally, immunofluorescence staining was used to determine if iNOS expression was localized to infected cells by staining for the C. rodentium virulence factor, translocated intimin receptor (Tir), as well as iNOS. Interestingly, while more than 85% of uninfected epithelial cells expressed iNOS, fewer than 15% of infected (Tir-positive) cells expressed detectable iNOS. These results demonstrate that both iNOS and intestinal epithelial cells play an active role in host defense during C. rodentium infection. However, the selective expression of iNOS by uninfected but not infected cells suggests that this pathogen has developed mechanisms to locally limit its exposure to host-derived NO. PMID:12379723

  2. ROE Precipitation

    Data.gov (United States)

    U.S. Environmental Protection Agency — This polygon dataset represents the rate of change in precipitation across the United States in terms of percent change per century. The map shows National Oceanic...

  3. Disordered nano-wrinkle substrates for inducing crystallization over a wide range of concentration of protein and precipitant

    CERN Document Server

    Ghatak, Anindita Sengupta

    2015-01-01

    There are large number of proteins, the existence of which are known but not their crystal structure, because of difficulty in finding the exact condition for their crystallization. Heterogeneous nucleation on disordered porous substrates with small yet large distribution of pores is considered a panacea for this problem, but a universal nucleant, suitable for crystallizing large variety of proteins does not really exist. To this end, we report here a nano-wrinkled substrate which displays remarkable ability and control over protein crystallization. Experiments with different proteins show that on these substrates, crystals nucleate even at very low protein concentration in buffer. Small number of very large crystals appear for precipitant concentrations varied over orders of magnitude ~0.003-0.3M; for some proteins, crystals appear even without addition of any precipitant, not seen with any other heterogeneous substrates. In essence, these substrates significantly diminish the influence of the above two para...

  4. Antibiotic-induced dysbiosis alters host-bacterial interactions and leads to colonic sensory and motor changes in mice.

    Science.gov (United States)

    Aguilera, M; Cerdà-Cuéllar, M; Martínez, V

    2015-01-01

    Alterations in the composition of the commensal microbiota (dysbiosis) seem to be a pathogenic component of functional gastrointestinal disorders, mainly irritable bowel syndrome (IBS), and might participate in the secretomotor and sensory alterations observed in these patients.We determined if a state antibiotics-induced intestinal dysbiosis is able to modify colonic pain-related and motor responses and characterized the neuro-immune mechanisms implicated in mice. A 2-week antibiotics treatment induced a colonic dysbiosis (increments in Bacteroides spp, Clostridium coccoides and Lactobacillus spp and reduction in Bifidobacterium spp). Bacterial adherence was not affected. Dysbiosis was associated with increased levels of secretory-IgA, up-regulation of the antimicrobial lectin RegIIIγ, and toll-like receptors (TLR) 4 and 7 and down-regulation of the antimicrobial-peptide Resistin-Like Molecule-β and TLR5. Dysbiotic mice showed less goblet cells, without changes in the thickness of the mucus layer. Neither macroscopical nor microscopical signs of inflammation were observed. In dysbiotic mice, expression of the cannabinoid receptor 2 was up-regulated, while the cannabinoid 1 and the mu-opioid receptors were down-regulated. In antibiotic-treated mice, visceral pain-related responses elicited by intraperitoneal acetic acid or intracolonic capsaicin were significantly attenuated. Colonic contractility was enhanced during dysbiosis. Intestinal dysbiosis induce changes in the innate intestinal immune system and modulate the expression of pain-related sensory systems, an effect associated with a reduction in visceral pain-related responses. Commensal microbiota modulates gut neuro-immune sensory systems, leading to functional changes, at least as it relates to viscerosensitivity. Similar mechanisms might explain the beneficial effects of antibiotics or certain probiotics in the treatment of IBS. PMID:25531553

  5. Natural Killer Cells and Helicobacter pylori Infection: Bacterial Antigens and Interleukin-12 Act Synergistically To Induce Gamma Interferon Production

    Science.gov (United States)

    Yun, Cheol H.; Lundgren, Anna; Azem, Josef; Sjöling, Åsa; Holmgren, Jan; Svennerholm, Ann-Mari; Lundin, B. Samuel

    2005-01-01

    Helicobacter pylori is known to induce a local immune response, which is characterized by activation of lymphocytes and the production of IFN-γ in the stomach mucosa. Since not only T cells, but also natural killer (NK) cells, are potent producers of gamma interferon (IFN-γ), we investigated whether NK cells play a role in the immune response to H. pylori infection. Our results showed that NK cells were present in both the gastric and duodenal mucosae but that H. pylori infection did not affect the infiltration of NK cells into the gastrointestinal area. Furthermore, we could show that NK cells could be activated directly by H. pylori antigens, as H. pylori bacteria, as well as lysate from H. pylori, induced the secretion of IFN-γ by NK cells. NK cells were also activated without direct contact when separated from the bacteria by an epithelial cell layer, indicating that the activation of NK cells by H. pylori can also occur in vivo, in the infected stomach mucosa. Moreover, the production of IFN-γ by NK cells was greatly enhanced when a small amount of interleukin-12 (IL-12) was added, and this synergistic effect was associated with increased expression of the IL-12 receptor β2. It was further evident that bacterial lysate alone was sufficient to induce the activation of cytotoxicity-related molecules. In conclusion, we demonstrated that NK cells are present in the gastroduodenal mucosa of humans and that NK cells produce high levels of IFN-γ when stimulated with a combination of H. pylori antigen and IL-12. We propose that NK cells play an active role in the local immune response to H. pylori infection. PMID:15731046

  6. Long-term variability of thunderstorm occurrence and thunderstorm induced extreme precipitation in Slovakia over 1951-2010

    Czech Academy of Sciences Publication Activity Database

    Pecho, Jozef; Faško, P.; Bližňák, Vojtěch; Košťálová, J.; Kajaba, P.

    Ohrid : Balkan Institute for Water and Environment, 2012. od-do. ISBN N. [International Scientific Conference on Water, Climate and Environment BALWOIS 2012 /5./. 28.05.2012-02.06.2012, Ohrid] Institutional support: RVO:68378289 Keywords : thunderstorm occurrence * trend analysis * extreme precipitation, * day with thunderstorm * climate change * climate variability * Slovakia Subject RIV: DG - Athmosphere Sciences, Meteorology http://ocs.balwois.com/index.php?conference=BALWOIS&schedConf=BW2012&page=paper&op=view&path[]=214

  7. Modeling of induced mutation process in bacterial cells with defects in excision repair system

    International Nuclear Information System (INIS)

    A mathematical model of the UV-induced mutation process in Escherichia coli bacteria cells with defects in uvrA and polA genes has been developed. The model describes in detail the reaction kinetics for excision repair system. The number of mismatches as results from translesion-synthesis is calculated for both wild-type and mutant cells. An effect of temporal modulation for amount of single-stranded DNA during post-replication repair is predicted. A comparison of repair system efficiency is conducted

  8. Interaction between recrystallization and strain-induced precipitation in a high Nb- and N-bearing austenitic stainless steel: Influence of the interpass time

    Energy Technology Data Exchange (ETDEWEB)

    Silva, M.B.R., E-mail: marianabdrs@gmail.com [Department of Materials Engineering, UFSCar, Via Washington Luis, Km 235, 13565-905 São Carlos, SP (Brazil); Gallego, J. [Department of Mechanical Engineering, UNESP, Avenida Brasil, 56, 15385-000 Ilha Solteira, SP (Brazil); Cabrera, J.M. [Department of Materials Science and Metallurgical Engineering, Polytechnic University of Catalunya, Avenida Diagonal 647, 08028 Barcelona (Spain); Fundacio CTM Centre Tecnologic, Plaza de la Ciencia 2, 08243 Manresa (Spain); Balancin, O. [Department of Materials Engineering, UFSCar, Via Washington Luis, Km 235, 13565-905 São Carlos, SP (Brazil); Jorge, A.M., E-mail: moreira@dema.ufscar.br [Department of Materials Engineering, UFSCar, Via Washington Luis, Km 235, 13565-905 São Carlos, SP (Brazil)

    2015-06-18

    In this work, we studied the influence of the interpass time (20 and 5 s) on the interaction between recrystallization and strain-induced precipitation occurring during multiple passes' deformations under continuous cooling conditions in a high niobium- and nitrogen-bearing austenitic stainless steel (ISO 5832-9). The correlation between microstructure evolution and hot mechanical properties was performed by physical simulation using hot torsion tests. The microstructure evolution was analyzed by optical microscopy, transmission electron microscopy and electron back scattered diffraction (EBSD). This technique indicated that dynamic recrystallization occurred at the first passes promoting an excellent grain refinement. On the other hand, shorter interpass time (5 s) allowed higher volume fraction of smallest precipitates than larger interpass time (20 s). After soaking, only TiNbN precipitates were found, whereas, Z-phase (CrNbN) and NbN were formed during thermomechanical processing. Particles with sizes between 20 and 50 nm were effective to pin grain boundaries and dislocations.

  9. Interaction between recrystallization and strain-induced precipitation in a high Nb- and N-bearing austenitic stainless steel: Influence of the interpass time

    International Nuclear Information System (INIS)

    In this work, we studied the influence of the interpass time (20 and 5 s) on the interaction between recrystallization and strain-induced precipitation occurring during multiple passes' deformations under continuous cooling conditions in a high niobium- and nitrogen-bearing austenitic stainless steel (ISO 5832-9). The correlation between microstructure evolution and hot mechanical properties was performed by physical simulation using hot torsion tests. The microstructure evolution was analyzed by optical microscopy, transmission electron microscopy and electron back scattered diffraction (EBSD). This technique indicated that dynamic recrystallization occurred at the first passes promoting an excellent grain refinement. On the other hand, shorter interpass time (5 s) allowed higher volume fraction of smallest precipitates than larger interpass time (20 s). After soaking, only TiNbN precipitates were found, whereas, Z-phase (CrNbN) and NbN were formed during thermomechanical processing. Particles with sizes between 20 and 50 nm were effective to pin grain boundaries and dislocations

  10. Enhanced Expression of Aquaporin-9 in Rat Brain Edema Induced by Bacterial Lipopolysaccharides

    Institute of Scientific and Technical Information of China (English)

    Huaili WANG; Runming JIN; Peichao TIAN; Zhihong ZHUO

    2009-01-01

    To investigate the role of AQP9 in brain edema,the expression of AQP9 in an infectious rat brain edema model induced by the injection of lipopolysaccharide (LPS) was examined.Immunohistochemistry and reverse transcription-polymerase chain reaction (RT-PCR) analysis demonstrated that the expressions of AQP9 mRNA and protein at all observed intervals were significantly increased in LPS-treated animals in comparison with the control animals.Time-course analysis showed that the first signs of blood-brain barrier disruption and the increase of brain water content in LPS-treated animals were evident 6 h after LPS injection,with maximum value appearing at 12 h,which coincided with the expression profiles of AQP9 mRNA and protein in LPS-treated animals.The further correlation analysis revealed strong positive correlations among the brain water content,the disruption of the blood-brain barrier and the enhanced expressions of AQP9 mRNA and protein in LPS-treated animals.These results suggested that the regulation of AQP9 expression may play important roles in water movement and in brain metabolic homeostasis associated with the pathophysiology of brain edema induced by LPS injection.

  11. Bacterial-induced cell reprogramming to stem cell-like cells: new premise in host-pathogen interactions

    OpenAIRE

    Hess, Samuel; Rambukkana, Anura

    2014-01-01

    Bacterial pathogens employ a myriad of strategies to alter host tissue cell functions for bacterial advantage during infection. Recent advances revealed a fusion of infection biology with stem cell biology by demonstrating developmental reprogramming of lineage committed host glial cells to progenitor/stem cell-like cells by an intracellular bacterial pathogen Mycobacterium leprae. Acquisition of migratory and immunomodulatory properties of such reprogrammed cells provides an added advantage ...

  12. Morphine Induces Bacterial Translocation in Mice by Compromising Intestinal Barrier Function in a TLR-Dependent Manner

    OpenAIRE

    Meng, Jingjing; Yu, Haidong; Ma, Jing; Wang, Jinghua; Banerjee, Santanu; Charboneau, Rick; Barke, Roderick A.; Roy, Sabita

    2013-01-01

    Opiates are among the most prescribed drugs for pain management. However, morphine use or abuse results in significant gut bacterial translocation and predisposes patients to serious infections with gut origin. The mechanism underlying this defect is still unknown. In this report, we investigated the mechanisms underlying compromised gut immune function and bacterial translocation following morphine treatment. We demonstrate significant bacterial translocation to mesenteric lymph node (MLN) a...

  13. A model for the influence of microstructure, precipitate pinning and fission gas behavior on irradiation-induced recrystallization of nuclear fuels

    International Nuclear Information System (INIS)

    Irradiation-induced recrystallization appears to be a general phenomenon in that it is observed to occur in a variety of nuclear fuel types, e.g. U-xMo, UO2, and U3O8. For temperatures below that where significant thermal annealing of defects occurs, an expression is derived for the fission density at which irradiation-induced recrystallization is initiated that is athermal and weakly dependent on fission rate. The initiation of recrystallization is to be distinguished from the subsequent progression and eventual consumption of the original fuel grain. The formulation takes into account the observed microstructural evolution of the fuel, the role of precipitate pinning and fission gas bubbles, and the triggering event for recrystallization. The calculated dislocation density, fission gas bubble-size distribution, and fission density at which recrystallization first appears are compared to measured quantities

  14. Control of γ lamella precipitation in Ti–39 at.% Al single crystals by nanogroove-induced dislocation bands

    International Nuclear Information System (INIS)

    We attempted to control γ lamellae precipitation in Ti–39 at.% Al single crystals by nanogrooving process (NGP) intending to introduce periodic dislocation bands as preferential nucleation sites of γ-TiAl lamellae precipitates. In NGP, grooves were formed along the trace of (0 0 0 1) basal plane on the surfaces of single crystal of α2-phase supersaturated with Al-atoms by nano-scale plastic deformation using diamond knives with the edge angle of 60°. The widths of grooves ranged from 180 nm to 1860 nm for the load per knife-edge length in the range from 0.3 N/mm to 8.3 N/mm. Beneath the grooves, dislocation bands consisting of both basal dislocations and non-basal dislocations were formed. After aging at 1073 K for 1 × 104 s, pairs of γ lamellae were found to form only beneath the grooves to depths greater than 30 μm, meaning that the location of γ lamellae could be controlled by NGP. Increasing the aging temperature to 1173 K provided even greater control, with arrays of γ lamella bundles exhibiting a periodicity identical to that of the nanogrooves, and even near the surface no γ lamellae were formed in un-deformed regions. No concentration gradient was found within individual γ lamellae, which had a near-equilibrium Al concentration; thinner γ lamellae tended to have a slightly lower Al concentration. These results indicate that the precipitation of γ lamellae can be effectively controlled by introducing periodic dislocation bands using NGP, which opens new avenue for the manufacturing of near- or sub-wavelength grating structures with ultra-high aspect ratios through the selective dissolution of these γ lamellae

  15. Are bacterial volatile compounds poisonous odors to a fungal pathogen Botrytis cinerea, alarm signals to Arabidopsis seedlings for eliciting induced resistance, or both?

    Directory of Open Access Journals (Sweden)

    Choong-Min eRyu

    2016-02-01

    Full Text Available Biological control (biocontrol agents act on plants via numerous mechanisms, and can be used to protect plants from pathogens. Biocontrol agents can act directly as pathogen antagonists or competitors or indirectly to promote plant induced systemic resistance (ISR. Whether a biocontrol agent acts directly or indirectly depends on the specific strain and the pathosystem type. We reported previously that bacterial volatile organic compounds (VOCs are determinants for eliciting plant ISR. Emerging data suggest that bacterial VOCs also can directly inhibit fungal and plant growth. The aim of the current study was to differentiate direct and indirect mechanisms of bacterial VOC effects against Botrytis cinerea infection of Arabidopsis. Volatile emissions from Bacillus subtilis GB03 successfully protected Arabidopsis seedlings against B. cinerea. First, we investigated the direct effects of bacterial VOCs on symptom development and different phenological stages of B. cinerea including spore germination, mycelial attachment to the leaf surface, mycelial growth, and sporulation in vitro and in planta. Volatile emissions inhibited hyphal growth in a dose-dependent manner in vitro, and interfered with fungal attachment on the hydrophobic leaf surface. Second, the optimized bacterial concentration that did not directly inhibit fungal growth successfully protected Arabidopsis from fungal infection, which indicates that bacterial VOC-elicited plant ISR has a more important role in biocontrol than direct inhibition of fungal growth on Arabidopsis. We performed qRT-PCR to investigate the priming of the defense-related genes PR1, PDF1.2, and ChiB at 0, 12, 24, and 36 hours post-infection and 14 days after the start of plant exposure to bacterial VOCs. The results indicate that bacterial VOCs potentiate expression of PR1 and PDF1.2 but not ChiB, which stimulates SA- and JA-dependent signaling pathways in plant ISR and protects plants against pathogen

  16. Are Bacterial Volatile Compounds Poisonous Odors to a Fungal Pathogen Botrytis cinerea, Alarm Signals to Arabidopsis Seedlings for Eliciting Induced Resistance, or Both?

    Science.gov (United States)

    Sharifi, Rouhallah; Ryu, Choong-Min

    2016-01-01

    Biological control (biocontrol) agents act on plants via numerous mechanisms, and can be used to protect plants from pathogens. Biocontrol agents can act directly as pathogen antagonists or competitors or indirectly to promote plant induced systemic resistance (ISR). Whether a biocontrol agent acts directly or indirectly depends on the specific strain and the pathosystem type. We reported previously that bacterial volatile organic compounds (VOCs) are determinants for eliciting plant ISR. Emerging data suggest that bacterial VOCs also can directly inhibit fungal and plant growth. The aim of the current study was to differentiate direct and indirect mechanisms of bacterial VOC effects against Botrytis cinerea infection of Arabidopsis. Volatile emissions from Bacillus subtilis GB03 successfully protected Arabidopsis seedlings against B. cinerea. First, we investigated the direct effects of bacterial VOCs on symptom development and different phenological stages of B. cinerea including spore germination, mycelial attachment to the leaf surface, mycelial growth, and sporulation in vitro and in planta. Volatile emissions inhibited hyphal growth in a dose-dependent manner in vitro, and interfered with fungal attachment on the hydrophobic leaf surface. Second, the optimized bacterial concentration that did not directly inhibit fungal growth successfully protected Arabidopsis from fungal infection, which indicates that bacterial VOC-elicited plant ISR has a more important role in biocontrol than direct inhibition of fungal growth on Arabidopsis. We performed qRT-PCR to investigate the priming of the defense-related genes PR1, PDF1.2, and ChiB at 0, 12, 24, and 36 h post-infection and 14 days after the start of plant exposure to bacterial VOCs. The results indicate that bacterial VOCs potentiate expression of PR1 and PDF1.2 but not ChiB, which stimulates SA- and JA-dependent signaling pathways in plant ISR and protects plants against pathogen colonization. This study

  17. Effects of microbially induced transformations and shift in bacterial community on arsenic mobility in arsenic-rich deep aquifer sediments.

    Science.gov (United States)

    Das, Suvendu; Liu, Chia-Chuan; Jean, Jiin-Shuh; Lee, Chuan-Chun; Yang, Huai-Jen

    2016-06-01

    Elevated concentration of arsenic (As) prevailed in deep aquifers of Chianan Plain, Taiwan. Arsenic release in relation to microbially induced transformations and shift in bacterial communities in deep aquifer sediments of Budai, southwestern Taiwan were investigated using microcosm experiments and substrate amendments over 90 days of anaerobic incubation. The results revealed that As reduction was independent of Fe reduction and a modest rate of sedimentary As release into aqueous phase occurred at the expense of the native organic carbon. Addition of lactate resulted in a parallel increase in As(III) (3.7-fold), Fe(II) (6.2-fold) and Mn (3.5 fold) in aqueous phase compared to un-amended slurries and the enrichment of sequences related to mostly Bacillus, Flavisolibacter, and Geobacter spp, suggesting the important role of these bacteria in As enrichment through reductive dissolution of As-bearing Fe and Mn minerals. The increase in phosphate-extractable As in solid phase with concomitant rise in As in aqueous phase over the course of incubation further attested to the importance of reductive dissolution in promoting As release. Furthermore, the increase in arrA gene abundance with addition of labile carbon suggests that dissimilatory As reduction also may contribute to As enrichment in the water of the deep aquifer of Budai. PMID:26897570

  18. Ambient UV-B exposure reduces the binding of ofloxacin with bacterial DNA gyrase and induces DNA damage mediated apoptosis.

    Science.gov (United States)

    Singh, Jyoti; Dwivedi, Ashish; Mujtaba, Syed Faiz; Singh, Krishna P; Pal, Manish Kumar; Chopra, Deepti; Goyal, Shruti; Srivastav, Ajeet K; Dubey, Divya; Gupta, Shailendra K; Haldar, Chandana; Ray, Ratan Singh

    2016-04-01

    Ofloxacin (OFLX) is a broad spectrum antibiotic, which generates photo-products under sunlight exposure. Previous studies have failed to explain the attenuated anti-bacterial activity of OFLX. The study was extended to explore the unknown molecular mechanism of photogenotoxicity on human skin cell line (HaCaT) under environmental UV-B irradiation. Photochemically OFLX generates ROS and caused 2'-dGuO photodegradation. We have addressed the binding affinity of OFLX and its photo-products against DNA gyrase. Significant free radical generation such as (1)O2, O2(•-) and (•)OH reduces antioxidants and demonstrated the ROS mediated OFLX phototoxicity. However, the formation of micronuclei and CPDs showed photogenotoxic potential of OFLX. OFLX induced cell cycle arrest in sub-G1 peak. OFLX triggers apoptosis via permeabilization of mitochondrial membrane with the downregulation of anti-apoptotic Bcl-2 and caspase-3 whereas, upregulation of pro-apoptotic Bax and Cyto-C proteins. Our study illustrated that binding affinity of OFLX photo-products with DNA gyrase was mainly responsible for the attenuated antimicrobial activity. It was proved through molecular docking study. Thus, study suggests that sunlight exposure should avoid by drug users especially during peak hours for their safety from photosensitivity. Clinicians may guide patients regarding the safer use of photosensitive drugs during treatment. PMID:26812543

  19. Selective Protection of an ARF1-GTP Signaling Axis by a Bacterial Scaffold Induces Bidirectional Trafficking Arrest

    Directory of Open Access Journals (Sweden)

    Andrey S. Selyunin

    2014-03-01

    Full Text Available Bidirectional vesicular transport between the endoplasmic reticulum (ER and Golgi is mediated largely by ARF and Rab GTPases, which orchestrate vesicle fission and fusion, respectively. How their activities are coordinated in order to define the successive steps of the secretory pathway and preserve traffic directionality is not well understood in part due to the scarcity of molecular tools that simultaneously target ARF and Rab signaling. Here, we take advantage of the unique scaffolding properties of E. coli secreted protein G (EspG to describe the critical role of ARF1/Rab1 spatiotemporal coordination in vesicular transport at the ER-Golgi intermediate compartment. Structural modeling and cellular studies show that EspG induces bidirectional traffic arrest by tethering vesicles through select ARF1-GTP/effector complexes and local inactivation of Rab1. The mechanistic insights presented here establish the effectiveness of a small bacterial catalytic scaffold for studying complex processes and reveal an alternative mechanism of immune regulation by an important human pathogen.

  20. Endocytosis-inducer adhesins produced by enteropathogenic serogroups of Escherichia coli participate on bacterial attachment to infant enterocytes

    Directory of Open Access Journals (Sweden)

    João Ramos Costa Andrade

    1987-03-01

    Full Text Available Enteropathogenic E. coli (EPEC infection of Hep-2 cells preoceeds through bacterial attachment to cell surface and internalization of adhered bacteria. EPEC attachment is a prerequisite for cell infection and is mediated by adhesins that recognize carbohydrate-containing receptors on cell membrane. Such endocytosis-inducer adhesins (EIA also promote EPEC binding to infant enterocytes, suggesting that EIA may have an important role on EPEC gastroenteritis.A infecção de células Hep-2 por E. coli enteropatogênicas (ECEP implica na aderência bacteriana e posterior interiorização dos microrganismos aderidos por um mecanismo de endocitose. A aderência das ECEP é pré-requisito para a infecção e é mediada por adesinas que reconhecem receptores inibidos por certas oses na membrana celular. Tais "adesinas indutoras da endocitose" (AIE também promovem a ligação bacteriana a enterócitos obtidos do intestino delgado de lactente, sugerindo que as AIE possam desempenhar algum papel nas diarréias causadas por ECEP.

  1. Bacterial endotoxin-induced gene expression in the choroid plexus and paraventricular and supraoptic hypothalamic nuclei of the sheep.

    Science.gov (United States)

    Vellucci, S V; Parrott, R F

    1996-12-31

    The febrile and neuroendocrine responses to circulating endotoxin are effected, at least in part, by a central action of prostaglandins with interleukins serving as intermediaries. Data from rodents suggest that prostaglandin and interleukin (IL-1 beta) synthesis in response to endotoxin challenge may occur within the circumventricular organs of the brain, especially the choroid plexus; the present study investigated this possibility using the sheep as an experimental model. A pyretic dose of bacterial endotoxin (40 micrograms lipopolysaccharide) was given intravenously to sheep (n = 5) and the effect on gene expression in the choroid plexus after a 40 min interval was compared with that observed in vehicle-treated animals (n = 5) using in situ hybridisation histochemistry. Evidence of activational and synthetic events following endotoxin administration was provided by significant increases in c-fos (P gene expression. The results showed that c-fos mRNA increased in the paraventricular (P gene expression although oxytocin mRNA was enhanced throughout the paraventricular nucleus (P sheep to immunological challenge: (2) endotoxin-induced changes in gene expression in the ovine hypothalamus similar in those caused by other stressors: and (3) possible changes in oxytocin synthesis concomitant with fever in the sheep. PMID:9037517

  2. Bacterial antigen induced release of soluble vascular endothelial growth factor (VEGF) and VEGFR1 before and after surgery

    DEFF Research Database (Denmark)

    Svendsen, Mads N; Lykke, J; Werther, Kim;

    2005-01-01

    -induced release of sVEGF and sVEGFR1 from whole blood in vitro. MATERIAL AND METHODS: Sixty-one patients with abdominal diseases undergoing five different surgical procedures were included in the study. Blood samples were drawn from patients before and after the operation. White blood cells and platelets were......OBJECTIVE: The influence of surgery on release of soluble vascular endothelial growth factor (sVEGF) and the soluble inhibitory receptor (sVEGFR1) is unknown. The effect of major and minor surgery on variations in sVEGF and sVEGFR1 concentrations in vivo was studied, and on bacterial antigen...... counted, and plasma sVEGF and sVEGFR1 were determined. Whole blood from each blood sample was stimulated in vitro with bacteria-derived antigens (lipopolysaccharides or protein A) and sVEGF and sVEGFR1 levels were subsequently determined in the supernatants. RESULTS: Neither sVEGF nor sVEGFR1...

  3. Role of Bacterial Exopolysaccharides as Agents in Counteracting Immune Disorders Induced by Herpes Virus

    Directory of Open Access Journals (Sweden)

    Concetta Gugliandolo

    2015-08-01

    Full Text Available Extreme marine environments, such as the submarine shallow vents of the Eolian Islands (Italy, offer an almost unexplored source of microorganisms producing unexploited and promising biomolecules for pharmaceutical applications. Thermophilic and thermotolerant bacilli isolated from Eolian vents are able to produce exopolysaccharides (EPSs with antiviral and immunomodulatory effects against Herpes simplex virus type 2 (HSV-2. HSV-2 is responsible for the most common and continuously increasing viral infections in humans. Due to the appearance of resistance to the available treatments, new biomolecules exhibiting different mechanisms of action could provide novel agents for treating viral infections. The EPSs hinder the HSV-2 replication in human peripheral blood mononuclear cells (PBMC but not in WISH (Wistar Institute Susan Hayflic cells line, indicating that cell-mediated immunity was involved in the antiviral activity. High levels of Th1-type cytokines were detected in PBMC treated with all EPSs, while Th2-type cytokines were not induced. These EPSs are water soluble exopolymers able to stimulate the immune response and thus contribute to the antiviral immune defense, acting as immunomodulators. As stimulants of Th1 cell-mediated immunity, they could lead to the development of novel drugs as alternative in the treatment of herpes virus infections, as well as in immunocompromised host.

  4. Detection of SOS response induced by γ-irradiation using umu-test, a bacterial short-term test

    International Nuclear Information System (INIS)

    The genotoxic effects of γ-irradiation were examined using the umu-test, a bacterial short-term test for the detection of genotoxic agents. The principle of the umu-test is based on the induction of the SOS function against DNA damage in Salmonella typhimurium (TA1535/pSK1002 and TA4107/pSK1002); the test measures colorimetrically the expression of umu gene involved directly in SOS mutagenesis. The strains, irradiated aerobically in phosphate buffer, showed a phasic response to γ-irradiation during their growth cycles. The SOS response was the highest level in the lag phase, suggesting that the irradiated lag-phase cells are very sensitive to γ-irradiation and survive via mutation. The hydroxyl radical scavengers, dimethylsulfoxide (DMSO) and ethanol, decreased the SOS response in a dose-related manner. DMSO (0.5 M) added into the aerobic cell suspension decreased the SOS response by about 50% in TA1535/pSK1002 and by about 40% in TA4107/pSK1002; the similar proportion was shown in the anaerobic cell suspension containing the scavenger. In addition, the SOS response induced under the aerobic condition was reduced by about 60% in the anaerobic cell suspension containing 0.5 M DMSO. The observations suggest that the SOS response is induced similarly by the direct excitation and the indirect effect by hydroxyl radicals generated during the γ-irradiation of aqueous solution. These results obtained using umu-test were consistent with the phasic response and the irradiation effect reported previously using the survival and DNA strand breaks of bacteria. (author)

  5. Induced release of a plant-defense volatile 'deceptively' attracts insect vectors to plants infected with a bacterial pathogen.

    Directory of Open Access Journals (Sweden)

    Rajinder S Mann

    Full Text Available Transmission of plant pathogens by insect vectors is a complex biological process involving interactions between the plant, insect, and pathogen. Pathogen-induced plant responses can include changes in volatile and nonvolatile secondary metabolites as well as major plant nutrients. Experiments were conducted to understand how a plant pathogenic bacterium, Candidatus Liberibacter asiaticus (Las, affects host preference behavior of its psyllid (Diaphorina citri Kuwayama vector. D. citri were attracted to volatiles from pathogen-infected plants more than to those from non-infected counterparts. Las-infected plants were more attractive to D. citri adults than non-infected plants initially; however after feeding, psyllids subsequently dispersed to non-infected rather than infected plants as their preferred settling point. Experiments with Las-infected and non-infected plants under complete darkness yielded similar results to those recorded under light. The behavior of psyllids in response to infected versus non-infected plants was not influenced by whether or not they were carriers of the pathogen. Quantification of volatile release from non-infected and infected plants supported the hypothesis that odorants mediate psyllid preference. Significantly more methyl salicylate, yet less methyl anthranilate and D-limonene, was released by infected than non-infected plants. Methyl salicylate was attractive to psyllids, while methyl anthranilate did not affect their behavior. Feeding on citrus by D. citri adults also induced release of methyl salicylate, suggesting that it may be a cue revealing location of conspecifics on host plants. Infected plants were characterized by lower levels of nitrogen, phosphorus, sulfur, zinc, and iron, as well as, higher levels of potassium and boron than non-infected plants. Collectively, our results suggest that host selection behavior of D. citri may be modified by bacterial infection of plants, which alters release of

  6. Detection of bacterial infection of agave plants by laser-induced fluorescence

    Science.gov (United States)

    Cervantes-Martinez, Jesus; Flores-Hernandez, Ricardo; Rodriguez-Garay, Benjamin; Santacruz-Ruvalcaba, Fernando

    2002-05-01

    Greenhouse-grown plants of Agave tequilana Weber var. azul were inoculated with Erwinia carotovora, the causal agent of stem soft rot. We investigated the laser-induced fluorescence (LIF) of agave plants to determine whether LIF can be used as a noninvasive sensing tool for pathological studies. The LIF technique was also investigated as a means of detecting the effect of the polyamine biosynthesis inhibitor beta-hydroxyethylhydrazine as a bactericide against the pathogenic bacterium Erwinia carotovora. A He-Ne laser at 632.8 nm was used as the excitation source, and in vivo fluorescence emission spectra were recorded in the 660-790-range. Fluorescence maxima were at 690 and 740 nm. The infected plants that were untreated with the bactericide showed a definite increase in fluorescence intensity at both maxima within the first three days after infection. Beginning on the fifth day, a steady decrease in fluorescence intensity was observed, with a greater effect at 740 than at 690 nm. After 30 days there was no fluorescence. The infected plants that had been treated with the bactericide showed no significant change in fluorescence compared with that of the uninfected plants. The ratio of fluorescence intensities was determined to be F 690 nm/F 740 nm for all treatments. These studies indicate that LIF measurements of agave plants may be used for the early detection of certain types of disease and for determining the effect of a bactericide on bacteria. The results also showed that fluorescence intensity ratios can be used as a reliable indicator of the progress of disease.

  7. Thermally induced dissolution/precipitation--a simple approach for the preparation of macroporous monoliths from linear aliphatic polyamides.

    Science.gov (United States)

    Nguyen, Anh Mai; Nordborg, Anna; Shchukarev, Andrei; Irgum, Knut

    2009-08-01

    A versatile way of preparing macroporous monolithic materials from linear aliphatic polyamides is presented. Simply, polyamide pellets were treated in benzyl alcohol (BA) at elevated temperature, causing dissolution by interchain hydrogen bond disruption. Subsequent cooling below the upper critical solution temperature (UCST) resulted in precipitation and partial restoration of the semicrystalline polymer, which is organized into network structures. The final steps were a solvent exchange of BA for methanol, followed by drying to form monolithic entities. A number of polyamides ranging from hydrophilic to hydrophobic were tested and under the experimental conditions, poly(1-aza-2-cycloheptanone (PA6) and (poly-[imino-1,6-hexanediylimino{1,10-dioxo-1,10-decanediyl}] (PA610) yielded entities with macroporous properties that were deemed useful for liquid chromatography. The morphological features and porous properties of the monoliths produced by this dissolution-precipitation procedure were studied by scanning electron microscopy, adsorption/desorption of N(2)(g) according to the Brunauer-Emmett-Teller (BET) principle, and mercury intrusion porosimetry. Degradation of the polymer backbone was noticeable when the dissolution time was extended and shortening of the polymer chains was confirmed by MALDI-MS, viscosity measurements, X-ray photoelectron spectroscopy (XPS), and potentiometric titration. When the heating was limited to the time it took to dissolve the polymers, mechanically stable monoliths could be obtained. The dissolution/heat treatment time further seemed to be useful for controlling the macroporous morphology. PMID:19670277

  8. Induced drought tolerance through wild and mutant bacterial strain Pseudomonas simiae in mung bean (Vigna radiata L.).

    Science.gov (United States)

    Kumari, Sarita; Vaishnav, Anukool; Jain, Shekhar; Varma, Ajit; Choudhary, Devendra Kumar

    2016-01-01

    The present study focused on the overproducing mutant of a plant growth promoting rhizobacterium (PGPR) Pseudomonas simiae strain AU (MTCC-12057) for significant drought tolerance in mung bean plants. Five mutants namely AU-M1, AU-M2, AU-M3, AU-M4 and AU-M5 were made after treatment of wild type strain with N-methyl-N-nitro-N-nitrosoguanidine. Mutant strain AU-M4 was recorded for enhanced ACC deaminase (ACC-D) activity, indole acetic acid (IAA) production and inorganic phosphate (Pi) solubilization compared to wild strain and other four mutant strains under drought condition. AU-M4 showed higher phosphate solubilization index (8.17) together with higher ACC-D activity (98 nmol/mg/h) and IAA concentration (69.35 µg/ml) compared with the wild type P. simiae strain AU ACC-D activity (79 nmol/mg/h) and IAA concentration (38.98 µg/ml) respectively. In this report, we investigated the effect of both wild and mutant type bacterial strain on mung bean plants under drought stress. Results showed that mutant AU-M4 and wild type strain AU inoculated plants exhibited superior tolerance against drought stress, as shown by their enhanced plant biomass (fresh weight), higher water content, higher proline accumulation and lower osmotic stress injury. Mutant AU-M4 and wild strain AU inoculated plants reduced the ethylene level by 59 and 45% respectively, compared to the control under stress condition. Furthermore, bacterial inoculated plants showed enhanced induced systemic drought tolerance by reducing stomata size and net photosynthesis resulting higher water content in mung bean plants that may help in survival of plants during drought condition. To mitigate the effects of drought stress, use of PGPR will be needed to ensure sufficient production of food from crop plants. Taking current leads available, concerted future research is needed in this area, particularly on field evaluation with application of potential microorganisms. PMID:26712619

  9. The chemically inducible expression of Erwinia amylovora bacterial effectors EopB1 and HopCEa in apple

    Science.gov (United States)

    Erwinia amylovora, the causal agent of fire blight disease, utilizes a type three secretion system to deliver effector proteins into plant host cells. To investigate the role of individual bacterial effector proteins, we have engineered an apple host that transgenically expresses the bacterial effe...

  10. Precipitation Matters

    Science.gov (United States)

    McDuffie, Thomas

    2007-01-01

    Although weather, including its role in the water cycle, is included in most elementary science programs, any further examination of raindrops and snowflakes is rare. Together rain and snow make up most of the precipitation that replenishes Earth's life-sustaining fresh water supply. When viewed individually, raindrops and snowflakes are quite…

  11. Prospecting for new bacterial metabolites: a glossary of approaches for inducing, activating and upregulating the biosynthesis of bacterial cryptic or silent natural products.

    Science.gov (United States)

    Zarins-Tutt, Joseph Scott; Barberi, Tania Triscari; Gao, Hong; Mearns-Spragg, Andrew; Zhang, Lixin; Newman, David J; Goss, Rebecca Jane Miriam

    2016-01-01

    Covering: up to 2015. Over the centuries, microbial secondary metabolites have played a central role in the treatment of human diseases and have revolutionised the pharmaceutical industry. With the increasing number of sequenced microbial genomes revealing a plethora of novel biosynthetic genes, natural product drug discovery is entering an exciting second golden age. Here, we provide a concise overview as an introductory guide to the main methods employed to unlock or up-regulate these so called 'cryptic', 'silent' and 'orphan' gene clusters, and increase the production of the encoded natural product. With a predominant focus on bacterial natural products we will discuss the importance of the bioinformatics approach for genome mining, the use of first different and simple culturing techniques and then the application of genetic engineering to unlock the microbial treasure trove. PMID:26538321

  12. Are Bacterial Volatile Compounds Poisonous Odors to a Fungal Pathogen Botrytis cinerea, Alarm Signals to Arabidopsis Seedlings for Eliciting Induced Resistance, or Both?

    OpenAIRE

    Sharifi, Rouhallah; Ryu, Choong-Min

    2016-01-01

    Biological control (biocontrol) agents act on plants via numerous mechanisms, and can be used to protect plants from pathogens. Biocontrol agents can act directly as pathogen antagonists or competitors or indirectly to promote plant induced systemic resistance (ISR). Whether a biocontrol agent acts directly or indirectly depends on the specific strain and the pathosystem type. We reported previously that bacterial volatile organic compounds (VOCs) are determinants for eliciting plant ISR. Eme...

  13. The neurotoxic effect of clindamycin - induced gut bacterial imbalance and orally administered propionic acid on DNA damage assessed by the comet assay: protective potency of carnosine and carnitine

    OpenAIRE

    El-Ansary, Afaf; Shaker, Ghada H; El-Gezeery, Amina R; Al-Ayadhi, Laila

    2013-01-01

    Background Comet assay is a quick method for assessing DNA damage in individual cells. It allows the detection of single and double DNA strand breaks, which represent the direct effect of some damaging agents. This study uses standard comet quantification models to compare the neurotoxic effect of orally administered propionic acid (PA) to that produced as a metabolite of bacterial overgrowth induced by clindamycin. Additionally, the protective effect of carnosine and carnitine as natural die...

  14. Reliable solution processed planar perovskite hybrid solar cells with large-area uniformity by chloroform soaking and spin rinsing induced surface precipitation

    International Nuclear Information System (INIS)

    A solvent soaking and rinsing method, in which the solvent was allowed to soak all over the surface followed by a spinning for solvent draining, was found to produce perovskite layers with high uniformity on a centimeter scale and with much improved reliability. Besides the enhanced crystallinity and surface morphology due to the rinsing induced surface precipitation that constrains the grain growth underneath in the precursor films, large-area uniformity with film thickness determined exclusively by the rotational speed of rinsing spinning for solvent draining was observed. With chloroform as rinsing solvent, highly uniform and mirror-like perovskite layers of area as large as 8 cm × 8 cm were produced and highly uniform planar perovskite solar cells with power conversion efficiency of 10.6 ± 0.2% as well as much prolonged lifetime were obtained. The high uniformity and reliability observed with this solvent soaking and rinsing method were ascribed to the low viscosity of chloroform as well as its feasibility of mixing with the solvent used in the precursor solution. Moreover, since the surface precipitation forms before the solvent draining, this solvent soaking and rinsing method may be adapted to spinless process and be compatible with large-area and continuous production. With the large-area uniformity and reliability for the resultant perovskite layers, this chloroform soaking and rinsing approach may thus be promising for the mass production and commercialization of large-area perovskite solar cells

  15. Thermal effects on microbial composition and microbiologically induced corrosion and mineral precipitation affecting operation of a geothermal plant in a deep saline aquifer.

    Science.gov (United States)

    Lerm, Stephanie; Westphal, Anke; Miethling-Graff, Rona; Alawi, Mashal; Seibt, Andrea; Wolfgramm, Markus; Würdemann, Hilke

    2013-03-01

    The microbial diversity of a deep saline aquifer used for geothermal heat storage in the North German Basin was investigated. Genetic fingerprinting analyses revealed distinct microbial communities in fluids produced from the cold and warm side of the aquifer. Direct cell counting and quantification of 16S rRNA genes and dissimilatory sulfite reductase (dsrA) genes by real-time PCR proved different population sizes in fluids, showing higher abundance of bacteria and sulfate reducing bacteria (SRB) in cold fluids compared with warm fluids. The operation-dependent temperature increase at the warm well probably enhanced organic matter availability, favoring the growth of fermentative bacteria and SRB in the topside facility after the reduction of fluid temperature. In the cold well, SRB predominated and probably accounted for corrosion damage to the submersible well pump and iron sulfide precipitates in the near wellbore area and topside facility filters. This corresponded to lower sulfate content in fluids produced from the cold well as well as higher content of hydrogen gas that was probably released from corrosion, and maybe favored growth of hydrogenotrophic SRB. This study reflects the high influence of microbial populations for geothermal plant operation, because microbiologically induced precipitative and corrosive processes adversely affect plant reliability. PMID:23358731

  16. WC/Co composite surface structure and nano graphite precipitate induced by high current pulsed electron beam irradiation

    International Nuclear Information System (INIS)

    High current pulsed electron beam (HCPEB) irradiation was conducted on a WC-6% Co hard alloy with accelerating voltage of 27 kV and pulse duration of 2.5 μs. The surface phase structure was examined by using glancing-angle X-ray diffraction (GAXRD), scanning electron microscope (SEM) and high resolution transmission electron microscope (HRTEM) methods. The surface tribological properties were measured. It was found that after 20 pulses of HCPEB irradiation, the surface structure of WC/Co hard alloy was modified dramatically and composed of a mixture of nano-grained WC1−x, Co3W9C4, Co3W3C phases and graphite precipitate domains ∼50 nm. The friction coefficient of modified surface decreased to ∼0.38 from 0.6 of the initial state, and the wear rate reduced from 8.4 × 10−5 mm3/min to 6.3 × 10−6 mm3/min, showing a significant self-lubricating effect.

  17. WC/Co composite surface structure and nano graphite precipitate induced by high current pulsed electron beam irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Hao, S.Z., E-mail: ebeam@dlut.edu.cn [Key Laboratory of Materials Modification and School of Physics and Optoelectronics Engineering, Dalian University of Technology, Dalian 116024 (China); Zhang, Y. [Key Laboratory of Materials Modification and School of Physics and Optoelectronics Engineering, Dalian University of Technology, Dalian 116024 (China); School of Materials Science and Engineering, Shenyang University of Technology, Shenyang 110870 (China); Xu, Y. [Key Laboratory of Materials Modification and School of Physics and Optoelectronics Engineering, Dalian University of Technology, Dalian 116024 (China); College of Materials Science and Engineering, Liaoning Technical University, Fuxin 123000 (China); Gey, N.; Grosdidier, T. [Université de Lorraine, Laboratoire d’Etude des Microstructures et de Mécanique des Matériaux (LEM3), CNRS UMR 7239, Ile du Saulcy, 57045 Metz (France); Université de Lorraine, Laboratoire d’Excellence on Design of Alloy Metals for Low-Mass Structure (DAMAS), Ile du Saulcy, 57045 Metz (France); Dong, C. [Key Laboratory of Materials Modification and School of Physics and Optoelectronics Engineering, Dalian University of Technology, Dalian 116024 (China); Université de Lorraine, Laboratoire d’Excellence on Design of Alloy Metals for Low-Mass Structure (DAMAS), Ile du Saulcy, 57045 Metz (France)

    2013-11-15

    High current pulsed electron beam (HCPEB) irradiation was conducted on a WC-6% Co hard alloy with accelerating voltage of 27 kV and pulse duration of 2.5 μs. The surface phase structure was examined by using glancing-angle X-ray diffraction (GAXRD), scanning electron microscope (SEM) and high resolution transmission electron microscope (HRTEM) methods. The surface tribological properties were measured. It was found that after 20 pulses of HCPEB irradiation, the surface structure of WC/Co hard alloy was modified dramatically and composed of a mixture of nano-grained WC{sub 1−x}, Co{sub 3}W{sub 9}C{sub 4}, Co{sub 3}W{sub 3}C phases and graphite precipitate domains ∼50 nm. The friction coefficient of modified surface decreased to ∼0.38 from 0.6 of the initial state, and the wear rate reduced from 8.4 × 10{sup −5} mm{sup 3}/min to 6.3 × 10{sup −6} mm{sup 3}/min, showing a significant self-lubricating effect.

  18. Yeast Cell Wall Extract Induces Disease Resistance against Bacterial and Fungal Pathogens in Arabidopsis thaliana and Brassica Crop

    OpenAIRE

    Narusaka, Mari; Minami, Taichi; Iwabuchi, Chikako; Hamasaki, Takashi; Takasaki, Satoko; Kawamura, Kimito; Narusaka, Yoshihiro

    2015-01-01

    Housaku Monogatari (HM) is a plant activator prepared from a yeast cell wall extract. We examined the efficacy of HM application and observed that HM treatment increased the resistance of Arabidopsis thaliana and Brassica rapa leaves to bacterial and fungal infections. HM reduced the severity of bacterial leaf spot and anthracnose on A. thaliana and Brassica crop leaves with protective effects. In addition, gene expression analysis of A. thaliana plants after treatment with HM indicated incre...

  19. Enhancement of Urinary Bladder Carcinogenesis by the Role of Chronic Bacterial Infection-induced Inflammation (Imunnohistochemical and Biochemical studies)

    OpenAIRE

    Gabri MS*, Ashmawy AM**, Ibrahim MA*, Hosny RM

    2012-01-01

    Background: Bacterial infections traditionally have not been considered major causes of cancer. Recently, however, bacteria have been linked to cancer by two mechanisms: induction of chronic inflammation and production of carcinogenic bacterial metabolites. The most specific example of the inflammatory mechanism of carcinogenesis is Escherichia coli infection. E. coli has been epidemiologically linked to urothelial carcinoma of the urinary bladder by its propensity to cause lifelong inflammat...

  20. Photoinduced tellurium precipitation in CdTe

    Science.gov (United States)

    Sugai, Shunji

    1991-06-01

    Tellurium precipitation in CdTe is found to be induced by photoirradiation with energy higher than the energy gap at 240 W/sq cm. It is suggested that this photoinduced precipitation is related with the strong electron-phonon interactions, possibly self-trapped excitons. This irreducible tellurium precipitation may cause a serious problem for the life of semiconductor devices.

  1. Canine uterine bacterial infection induces upregulation of proteolysis-related genes and downregulation of homeobox and zinc finger factors.

    Directory of Open Access Journals (Sweden)

    Ragnvi Hagman

    Full Text Available BACKGROUND: Bacterial infection with the severe complication of sepsis is a frequent and serious condition, being a major cause of death worldwide. To cope with the plethora of occurring bacterial infections there is therefore an urgent need to identify molecular mechanisms operating during the host response, in order both to identify potential targets for therapeutic intervention and to identify biomarkers for disease. Here we addressed this issue by studying global gene expression in uteri from female dogs suffering from spontaneously occurring uterine bacterial infection. PRINCIPAL FINDINGS: The analysis showed that almost 800 genes were significantly (p2-fold in the uteri of diseased animals. Among these were numerous chemokine and cytokine genes, as well as genes associated with inflammatory cell extravasation, anti-bacterial action, the complement system and innate immune responses, as well as proteoglycan-associated genes. There was also a striking representation of genes associated with proteolysis. Robust upregulation of immunoglobulin components and genes involved in antigen presentation was also evident, indicating elaboration of a strong adaptive immune response. The bacterial infection was also associated with a significant downregulation of almost 700 genes, of which various homeobox and zinc finger transcription factors were highly represented. CONCLUSIONS/SIGNIFICANCE: Together, these finding outline the molecular patterns involved in bacterial infection of the uterus. The study identified altered expression of numerous genes not previously implicated in bacterial disease, and several of these may be evaluated for potential as biomarkers of disease or as therapeutic targets. Importantly, since humans and dogs show genetic similarity and develop diseases that share many characteristics, the molecular events identified here are likely to reflect the corresponding situation in humans afflicted by similar disease.

  2. The clinical utility of induced sputum for the diagnosis of bacterial community-acquired pneumonia in HIV-infected patients: a prospective cross-sectional study

    Directory of Open Access Journals (Sweden)

    Rosemeri Maurici da Silva

    2006-04-01

    Full Text Available BACKGROUND: Bacterial pneumonias have been overcoming pneumocytosis in frequency. Controversy still remains about how to manage immunocompromised patients and those with lung diseases. Sputum analysis is a noninvasive and simple method, and when interpreted according to specific criteria it may help with diagnosis. We conducted a study to evaluate sensitivity, specificity, positive and negative predicted values, and the accuracy of induced sputum (IS for bacterial community-acquired pneumonia diagnosis in HIV-positive patients. MATERIAL AND METHODS: This cross sectional study evaluated a diagnostic procedure in a reference hospital for HIV patients in Florianópolis, SC, Brazil. From January 1, 2001 to September 30, 2002, 547 HIV-positive patients were analyzed and 54 inpatients with pulmonary infection were selected. Bronchoalveolar lavage (BAL and transbronchial lung biopsy (TBLB were considered the gold standards. Gram stains and quantitative cultures of IS and BAL were obtained. The cut-offs for quantitative cultures were 10(6 CFU/mL for IS and 10(4 CFU/mL for BAL. RESULTS: The mean age was 35.7 years, 79.6% were males and 85.2% were caucasians. The mean lymphocyte count was 124.8/mm³. Bacterial pneumonia was diagnosed in 20 patients. The most prevalent bacteria was Streptococcus pneumoniae. Considering IS for the diagnosis of bacterial pneumonia, sensitivity was 60%, specificity 40%, the positive predictive value was 80%, negative predictive value 20% and accuracy 56%. CONCLUSION: IS with quantitative culture can be helpful for the diagnosis of bacterial pneumonia in HIV-positive patients.

  3. Variations of both bacterial community and extracellular polymers: the inducements of increase of cell hydrophobicity from biofloc to aerobic granule sludge.

    Science.gov (United States)

    Guo, Feng; Zhang, Sheng-Hua; Yu, Xin; Wei, Bo

    2011-06-01

    To investigate the inducements of increase of cell hydrophobicity from aerobic biofloc (ABF) and granular sludge (AGS), in this study, as the first time the hydrophilic and hydrophobic bacterial communities were analyzed independently. Meanwhile, the effect of extracellular polymers (EPS) on the cell hydrophobicity is also studied. Few Bacteroidetes were detected (1.35% in ABF and 3.84% in AGS) in hydrophilic bacteria, whereas they are abundant in the hydrophobic cells (47.8% and 43% for ABF and AGS, respectively). The main species of Bacteroidetes changed from class Sphingobacteria to Flavobacteria in AGS. On the other hand, EPS is directly responsible to cell hydrophobicity. For AGS, cell hydrophobicity was sharply decreased after EPS extraction. Both quantity and property of the extracellular protein are related to hydrophobicity. Our results showed the variation of cell hydrophobicity was resulted from variations of both bacterial population and EPS. PMID:21482465

  4. Gamma irradiation induced mutation for the improvement of Josapine pineapple against bacterial heart rot disease and improved fruit quality

    International Nuclear Information System (INIS)

    Bacteria heart rot disease, caused by Erwinia chrysanthemi, is one of the most serious diseases of the susceptible cultivars of pineapple in Malaysia, namely, Josapine, Sarawak, Gandul and N36. Using acute irradiation of gamma-rays and in vitro cultured meristems, the selection of resistant mutant to bacterial heart rot disease with improved fruit quality has been carried out using radiation-induced mutagenesis of the most popular variety, Josapine. Meristem explants were irradiated with a series of gamma-ray doses of 0, 20, 40, 60, 80, 100, 120, 140 and 160Gy and radiosensitivity was investigated based on shoot formation and survival rate. The lethal dose required for 50% (LD50) and 100% (LD100) of meristem tissues for shoot formation was 40Gy and 83Gy respectively. On the other hand, the lethal dose required for 50% (LD50) and 100% (LD100) for survival rate was 77Gy and 147Gy respectively. Shoots derived from irradiated meristem explants at 10, 20, 30 and 40Gy were sub-cultured up to M1V5 to minimize chimerism. Multiplication of irradiated shoots was carried out in Temporary Immersion Bioreactor System using MS liquid media supplemented with 2.5mg/l benzyl aminopurine (BA). Rooting was promoted on MS media supplemented with 2mg/l indole-3-butyric acid (IBA) and rooted plantlets were hardened in the nursery for 2 months. Preliminary screening of 20,000 irradiated plants in the nursery indicated 60% with smooth leaves, besides vigorous growth. Selected mutant plantlets were field planted in hot spot until fruiting. At lower doses of 10 and 20Gy, there were no potential resistant mutant plants with significant improvement in total sugar content and fruit weight observed. However, at higher doses of 30 and 40Gy, 11 and 5 resistant plants with significant increase in both total sugar content and fruit weight were recorded, respectively. Molecular analysis using AFLP was conducted to identify markers for the selected characters. (author)

  5. Bacterial wall products induce downregulation of vascular endothelial growth factor receptors on endothelial cells via a CD14-dependent mechanism: implications for surgical wound healing.

    LENUS (Irish Health Repository)

    Power, C

    2012-02-03

    INTRODUCTION: Vascular endothelial growth factor (VEGF) is a potent mitogenic cytokine which has been identified as the principal polypeptide growth factor influencing endothelial cell (EC) migration and proliferation. Ordered progression of these two processes is an absolute prerequisite for initiating and maintaining the proliferative phase of wound healing. The response of ECs to circulating VEGF is determined by, and directly proportional to, the functional expression of VEGF receptors (KDR\\/Flt-1) on the EC surface membrane. Systemic sepsis and wound contamination due to bacterial infection are associated with significant retardation of the proliferative phase of wound repair. The effects of the Gram-negative bacterial wall components lipopolysaccharide (LPS) and bacterial lipoprotein (BLP) on VEGF receptor function and expression are unknown and may represent an important biological mechanism predisposing to delayed wound healing in the presence of localized or systemic sepsis. MATERIALS AND METHODS: We designed a series of in vitro experiments investigating this phenomenon and its potential implications for infective wound repair. VEGF receptor density on ECs in the presence of LPS and BLP was assessed using flow cytometry. These parameters were assessed in hypoxic conditions as well as in normoxia. The contribution of CD14 was evaluated using recombinant human (rh) CD14. EC proliferation in response to VEGF was quantified in the presence and absence of LPS and BLP. RESULTS: Flow cytometric analysis revealed that LPS and BLP have profoundly repressive effects on VEGF receptor density in normoxic and, more pertinently, hypoxic conditions. The observed downregulation of constitutive and inducible VEGF receptor expression on ECs was not due to any directly cytotoxic effect of LPS and BLP on ECs, as measured by cell viability and apoptosis assays. We identified a pivotal role for soluble\\/serum CD14, a highly specific bacterial wall product receptor, in

  6. 一株碳酸钙矿化菌的分离与鉴定%Isolation and Identification of a Bacterial Strain Inducing Mineralization of Calcium Carbonate

    Institute of Scientific and Technical Information of China (English)

    张振远; 李广悦; 丁德馨; 王永东; 胡南

    2014-01-01

    基于微生物诱导碳酸钙沉积的岩土工程加固技术是一种环境友好的新技术。碳酸钙矿化菌是该技术应用的前提。为获得具有诱导碳酸钙沉积能力的菌株,采用选择性富集培养、平板分离方法从土壤中分离得到了一株具有尿素分解能力的菌株,细菌诱导产生的沉积物检测结果表明该菌株具有诱导碳酸钙沉积能力。通过形态学、革兰氏染色和16 S rDNA序列同源性分析鉴定该菌株为巴斯德芽孢杆菌。%Biocementation through microbial calcium carbonate precipitation is an innova-tive and environmentally friendly rock and soil reinforcement technique in geotechnical en-gineering. The bacteria inducing mineralization of calcium carbonate is a prerequisite to im-plement the biological treatment process. In order to obtain the strain with ability to induce CaCO3 precipitation,a ureolytic strain was isolated from soil using selective enrichment cul-ture and plate screening techniques. The precipites induced by this stain were examined, and the results showed it was capable of inducing calcium carbonate mineralization. The strain was identified as Sporosarcina pasteurii based on morphology,Gram stain and 16S rDNA sequence analysis.

  7. Ion beam induced dissolution and precipitation of in situ formed Si-nanostructures in a-SiNx:H matrix

    International Nuclear Information System (INIS)

    We report here the response of in situ formed Si-nanostructures embedded in Si-rich hydrogenated amorphous silicon nitride matrix to 100 MeV Ni8+ ions irradiation under normal incidence at room temperature. Prior to irradiation, Si-nanostructures are amorphous in nature having partial crystallinity. Irradiation with a fluence of 5 × 1012 ions/cm2 leads to dissolution of Si-nanostructures. Nevertheless, irradiation with a relatively higher fluence of 1 × 1014 ions/cm2 enhances the nucleation and leads to the formation of amorphous Si-nanostructures. The results are understood on the basis of intense electronic energy loss induced hydrogen desorption and consequent rearrangement of the amorphous network under thermal spike formalism of ion–material interaction.

  8. Microbial composition in a deep saline aquifer in the North German Basin -microbiologically induced corrosion and mineral precipitation affecting geothermal plant operation and the effects of plant downtime

    Science.gov (United States)

    Lerm, Stephanie; Westphal, Anke; Miethling-Graff, Rona; Alawi, Mashal; Seibt, Andrea; Wolfgramm, Markus; Würdemann, Hilke

    2013-04-01

    The microbial composition in fluids of a deep saline geothermal used aquifer in the North German Basin was characterized over a period of five years. The genetic fingerprinting techniques PCR-SSCP and PCR-DGGE revealed distinct microbial communities in fluids produced from the cold and warm side of the aquifer. Direct cell counting and quantification of 16S rRNA genes and dissimilatory sulfite reductase (dsrA) genes by real-time PCR proved different population sizes in fluids, showing higher abundance of Bacteria and sulfate reducing bacteria (SRB) in cold fluids compared to warm fluids. Predominating SRB in the cold well probably accounted for corrosion damage to the submersible well pump, and iron sulfide precipitates in the near wellbore area and topside facility filters. This corresponded to a lower sulfate content in fluids produced from the cold well as well as higher content of hydrogen gas that was probably released from corrosion, and maybe favoured growth of hydrogenotrophic SRB. Plant downtime significantly influenced the microbial biocenosis in fluids. Samples taken after plant restart gave indications about the processes occurring downhole during those phases. High DNA concentrations in fluids at the beginning of the restart process with a decreasing trend over time indicated a higher abundance of microbes during plant downtime compared to regular plant operation. It is likely that a gradual drop in temperature as well as stagnant conditions favoured the growth of microbes and maturation of biofilms at the casing and in pores of the reservoir rock in the near wellbore area. Furthermore, it became obvious that the microorganisms were more associated to particles then free-living. This study reflects the high influence of microbial populations for geothermal plant operation, because microbiologically induced precipitative and corrosive processes adversely affect plant reliability. Those processes may favourably occur during plant downtime due to enhanced

  9. Effects of B2 precipitate size on transformation-induced plasticity of Cu–Zr–Al glassy alloys

    Energy Technology Data Exchange (ETDEWEB)

    Kuo, C.N. [Department of Materials and Optoelectronic Science, Center for Nanoscience and Nanotechnology, National Sun Yat-Sen University, Kaohsiung 804, Taiwan, ROC (China); Huang, J.C., E-mail: jacobc@mail.nsysu.edu.tw [Department of Materials and Optoelectronic Science, Center for Nanoscience and Nanotechnology, National Sun Yat-Sen University, Kaohsiung 804, Taiwan, ROC (China); Li, J.B.; Jang, J.S.C. [Institute of Materials Science and Engineering, Department of Mechanical Engineering, National Central University, Chung-Li, Taiwan, ROC (China); Lin, C.H. [Department of Mechanical and Electromechanical Engineering, National Sun Yat-Sen University, Kaohsiung 804, Taiwan, ROC (China); Nieh, T.G. [Department of Materials and Optoelectronic Science, Center for Nanoscience and Nanotechnology, National Sun Yat-Sen University, Kaohsiung 804, Taiwan, ROC (China); Department of Materials Science and Engineering, The University of Tennessee, Knoxville, TN 37996 (United States)

    2014-03-25

    Highlights: • This paper addresses the effects of the CuZr B2 size and distribution on plasticity. • There is a critical size to induce the martensitic/twinning transformation. • An analytic model based on melt flow dynamics is settled. -- Abstract: To demonstrate the effect of processing on the microstructure and subsequent mechanical property of bulk metallic glasses, we prepared two alloys, Cu{sub 47.5}Zr{sub 47.5}Al{sub 5} and Cu{sub 47.5}Zr{sub 48}Al{sub 4}Co{sub 0.5}, using two different designs of suction mold – one with a sharp inlet and one with a blunt inlet. The two alloys have been demonstrated previously to be ductile via phase transformation of the B2 phase and twin formation during plastic deformation. Microstructures of the as-cast as well plastically deformed samples, in particular, the size and distribution of the B2 phase, were examined using X-ray diffraction, scanning and transmission electron microscopy. Compressive tests were conducted on samples cast by different molds and their properties were found to closely correlate with the B2 morphology. Fluid dynamics during suction casting was also analyzed. Effects of Vena contracta, flow velocity, and Reynolds number were discussed and compared favorably with experimental observations.

  10. Elevated IgG levels against specific bacterial antigens in obese patients with diabetes and in mice with diet-induced obesity and glucose intolerance.

    Science.gov (United States)

    Mohammed, Nadeem; Tang, Lihua; Jahangiri, Anisa; de Villiers, Willem; Eckhardt, Erik

    2012-09-01

    High fat diets increase the risk for insulin resistance by promoting inflammation. The cause of inflammation is unclear, but germfree mouse studies have implicated commensal gut bacteria. We tested whether diet-induced obesity, diabetes, and inflammation are associated with anti-bacterial IgG. Blood from lean and obese healthy volunteers or obese patients with diabetes were analyzed by ELISA for IgG against extracts of potentially pathogenic and pro-biotic strains of Escherichia coli (LF-82 and Nissle), Bacteroides thetaiotaomicron, and Lactobacillus acidophilus, and for circulating tumor necrosis factor α (TNFα). C57Bl/6 mice were fed low- or high-fat diets (10% or 60% kcal from fat) for 10 weeks and tested for anti-bacterial IgG, bodyweight, fasting glucose, and inflammation. Obese diabetic patients had significantly more IgG against extracts of E. coli LF-82 compared with lean controls, whereas IgG against extracts of the other bacteria was unchanged. Circulating TNFα was elevated and correlated with IgG against the LF-82 extract. Mice fed high-fat diets had increased fasting glucose levels, elevated TNFα and neutrophils, and significantly more IgG against the LF-82 extracts. Diabetes in obesity is characterized by increased IgG against specific bacterial antigens. Specific commensal bacteria may mediate inflammatory effects of high-fat diets. PMID:22424821

  11. Chemopreventive effect of myrtenal on bacterial enzyme activity and the development of 1,2-dimethyl hydrazine-induced aberrant crypt foci in Wistar Rats

    Directory of Open Access Journals (Sweden)

    Lokesh Kumar Booupathy

    2016-01-01

    Full Text Available Colon cancer remains as a serious health problem around the world despite advances in diagnosis and treatment. Dietary fibers are considered to reduce the risk of colon cancer as they are converted to short chain fatty acids by the presence of anaerobic bacteria in the intestine, but imbalanced diet and high fat consumption may promote tumor formation at different sites, including the large bowel via increased bacterial enzymes activity. The present study was conducted to characterize the inhibitory action of myrtenal on bacterial enzymes and aberrant crypt foci (ACF. Experimental colon carcinogenesis induced by 1,2-dimethylhydrazine is histologically, morphologically, and anatomically similar to human colonic epithelial neoplasm. Discrete microscopic mucosal lesions such as ACF and malignant tumors function as important biomarkers in the diagnosis of colon cancer. Methylene blue staining was carried out to visualize the impact of 1,2-dimethylhydrazine and myrtenal. Myrtenal-treated animals showed decreased levels of bacterial enzymes such as β-glucuronidase, β-glucosidase, and mucinase. Characteristic changes in the colon were noticed by inhibiting ACF formation in the colon. In conclusion, treatment with myrtenal provided altered pathophysiological condition in colon cancer-bearing animals with evidence of decreased crypt multiplicity and tumor progression.

  12. Activation of corticotropin-releasing factor neurons and microglia in paraventricular nucleus precipitates visceral hypersensitivity induced by colorectal distension in rats.

    Science.gov (United States)

    Zhang, Gongliang; Yu, Le; Chen, Zi-Yang; Zhu, Jun-Sheng; Hua, Rong; Qin, Xia; Cao, Jun-Li; Zhang, Yong-Mei

    2016-07-01

    Visceral hypersensitivity is a major contributor to irritable bowel syndrome and other disorders with visceral pain. Substantial evidence has established that glial activation and neuro-glial interaction play a key role in the establishment and maintenance of visceral hypersensitivity. We recently demonstrated that activation of spinal microglial toll-like receptor 4 (TLR4)/myeloid differentiation factor 88 (MyD88)/nuclear factor κB (NF-κB) signaling facilitated the development of visceral hypersensitivity in a rat model developed by neonatal and adult colorectal distensions (CRDs). Hypothalamic paraventricular nucleus (PVN) plays a pivotal role in the pathogenesis of chronic pain. In this study, we examined the mechanism by which microglia and neurons in PVN establish and maintain visceral hypersensitivity and the involvement of TLR4 signaling. Visceral hypersensitivity was precipitated by adult colorectal distension (CRD) only in rats that experienced neonatal CRDs. Visceral hypersensitivity was associated with an increase in the expression of c-fos, corticotropin-releasing factor (CRF) protein and mRNA in PVN, which could be prevented by intra-PVN infusion of lidocaine or small interfering RNA targeting the CRF gene. These results suggest PVN CRF neurons modulate visceral hypersensitivity. Adult CRD induced an increase in the expression of Iba-1 (a microglial marker), TLR4 protein, and its downstream effectors MyD88, NF-κB, as well as proinflammatory cytokines tumor necrosis factor-α (TNF-α) and interleukin-1β (IL-1β) only in rats that experienced neonatal CRDs. Intra-PVN infusion of minocycline, a nonselective microglial inhibitor, attenuated the hyperactivity of TLR4 signaling cascade, microglial activation, and visceral hypersensitivity. Taken together, these data suggest that neonatal CRDs induce a glial activation in PVN. Adult CRD potentiates the glial and CRF neuronal activity, and precipitates visceral hypersensitivity and pain. TLR4 signaling and

  13. Magnetosphere-ionosphere coupling currents in Jupiter's middle magnetosphere: effect of precipitation-induced enhancement of the ionospheric Pedersen conductivity

    Directory of Open Access Journals (Sweden)

    J. D. Nichols

    2004-04-01

    Full Text Available We consider the effect of precipitation-induced enhancement of the Jovian ionospheric Pedersen conductivity on the magnetosphere-ionosphere coupling current system which is associated with the breakdown of the corotation of iogenic plasma in Jupiter's middle magnetosphere. In previous studies the Pedersen conductivity has been taken to be simply a constant, while it is expected to be significantly enhanced in the regions of upward-directed auroral field-aligned current, implying downward precipitating electrons. We develop an empirical model of the modulation of the Pedersen conductivity with field-aligned current density based on the modelling results of Millward et al. and compute the currents flowing in the system with the conductivity self-consistently dependent on the auroral precipitation. In addition, we consider two simplified models of the conductivity which provide an insight into the behaviour of the solutions. We compare the results to those obtained when the conductivity is taken to be constant, and find that the empirical conductivity model helps resolve some outstanding discrepancies between theory and observation of the plasma angular velocity and current system. Specifically, we find that the field-aligned current is concentrated in a peak of magnitude ~0.25µAm-2 in the inner region of the middle magnetosphere at ~20 RJ, rather than being more uniformly distributed as found with constant conductivity models. This peak maps to ~17° in the ionosphere, and is consistent with the position of the main oval auroras. The energy flux associated with the field-aligned current is ~10mWm-2 (corresponding to a UV luminosity of ~100kR, in a region ~0.6° in width, and the Pedersen conductivity is elevated from a background of ~0.05mho to ~0.7mho. Correspondingly, the total equatorial radial current increases greatly in the region of peak field-aligned current, and plateaus with increasing

  14. Multi-satellite sensor study on precipitation-induced emission pulses of NOx from soils in semi-arid ecosystems

    Science.gov (United States)

    Zörner, Jan; Penning de Vries, Marloes; Beirle, Steffen; Veres, Patrick; Williams, Jonathan; Wagner, Thomas

    2016-04-01

    Soil emissions of NOx (≡ NO + NO2), stemming from biotic emissions of NO, represent a considerable fraction of total NOx emissions, and may even dominate in agricultural and remote areas. Rain-induced spikes in NOx have been observed by in-situ measurements and also satellite observations. However, the estimation of soil emissions over broad geographic regions and on short time scales remains uncertain. This study presents a top-down approach to estimate pulsed soil emissions of trace gases on a global scale using tropospheric NO2 column densities (as a proxy for NOx) as observed by OMI, GOME-2 and SCIAMACHY. We introduce an optimized algorithm that synchronizes and averages multiple time series of atmospheric variables either from one location only, or also from different grid pixels, by aligning them on a relative scale to each other. This method allows investigating changes in the evolution of NO2 VCDs around the first day of rainfall after a prolonged dry period with a temporal resolution of one day and a spatial resolution of 0.25° . We find enhancements in NO2 VCDs on the day of first rainfall in many semi-arid regions in the world which are highly dependent on the season and land cover type. Strongest and most clustered enhancements are found in the distinct band of the Sahel region during the onset of the wet season in April-May-June. Absolute enhancements averaged over the Sahel region for four seasons from 2007 to 2010 range from 0.3*1015molec cm‑2 for OMI to 0.4*1015molec cm‑2 for GOME-2 and SCIAMACHY on the first day of rainfall. A thorough analysis of other influences on the retrieved signal as well as sensitivity studies are conducted which help to better characterize these short term enhancements. Translating the observed enhancements in NO2 VCDs to emission rates, leads to estimates between 5 and 65 ng N m‑2 s‑1 for the first day of rainfall which is in line with previous literature. We find that the enhancement in NO2 VCDs already starts

  15. Early administration of probiotics alters bacterial colonization and limits diet-induced gut dysfunction and severity of necrotizing enterocolitis in preterm pigs.

    Science.gov (United States)

    Siggers, Richard H; Siggers, Jayda; Boye, Mette; Thymann, Thomas; Mølbak, Lars; Leser, Thomas; Jensen, Bent B; Sangild, Per T

    2008-08-01

    Following preterm birth, bacterial colonization and enteral formula feeding predispose neonates to gut dysfunction and necrotizing enterocolitis (NEC), a serious gastrointestinal inflammatory disease. We hypothesized that administration of probiotics would beneficially influence early bacterial colonization, thereby reducing the susceptibility to formula-induced gut atrophy, dysfunction, and NEC. Caesarean-delivered preterm pigs were provided total parenteral nutrition (1.5 d) followed by enteral feeding (2 d) with porcine colostrum (COLOS; n = 5), formula (FORM; n = 9), or formula with probiotics (FORM-P; Bifidobacterium animalis and Lactobacillus: L. acidophilus, L. casei, L. pentosus, L. plantarum; n = 13). Clinical NEC scores were reduced (P < 0.05) in FORM-P (2.0 +/- 0.2) and COLOS groups (1.7 +/- 0.5) compared with FORM pigs (3.4 +/- 0.6). Lower NEC scores were associated with elevated intestinal weight, mucosa proportion, villus height, RNA integrity, and brush border aminopeptidase A and N activities, and lower gastric organic acid concentration in the FORM-P and COLOS groups (P < 0.05). Diversity of the mucosa-associated bacteria in the distal small intestine was similar among formula-fed pigs, yet the abundance of specific bacterial groups differed between FORM-P and FORM pigs. FORM-P pigs had lower colonization density of a potential pathogen, Clostridium perfringens, and had commensal Lactobacillus bacteria more closely associated with enterocytes along the villus-crypt axis relative to FORM pigs. These results suggest that probiotic administration immediately after birth promotes the colonization of a beneficial commensal microbiota capable of limiting the formula-induced mucosal atrophy, dysfunction, and pathogen load in preterm neonates, thereby reducing the incidence and severity of NEC. PMID:18641188

  16. Asymmetrical Precipitation of Ag3Sn Intermetallic Compounds Induced by Thermomigration of Ag in Pb-Free Microbumps During Solid-State Aging

    Science.gov (United States)

    Su, Yu-Ping; Wu, Chun-Sen; Ouyang, Fan-Yi

    2016-01-01

    Three-dimensional integrated circuit technology has become a major trend in electronics packaging in the microelectronics industry. To effectively remove heat from stacked integrated circuitry, a temperature gradient must be established across the chips. Furthermore, because of the trend toward higher device current density, Joule heating is more serious and temperature gradients across soldered joints are expected to increase. In this study we used heat-sink and heat-source devices to establish a temperature gradient across SnAg microbumps to investigate the thermomigration behavior of Ag in SnAg solder. Compared with isothermal conditions, small Ag3Sn particles near the hot end were dissolved and redistributed toward the cold end under a temperature gradient. The results indicated that temperature gradient-induced movement of Ag atoms occurred from the hot side toward the cold side, and asymmetrical precipitation of Ag3Sn resulted. The mechanism of growth of the intermetallic compound (IMC) Ag3Sn, caused by thermomigration of Ag, is discussed. The rate of growth Ag3Sn IMC at the cold side was found to increase linearly with solid-aging time under a temperature gradient. To understand the force driving Ag diffusion under the temperature gradient, the molar heat of transport ( Q*) of Ag in Sn was calculated as +13.34 kJ/mole.

  17. On the mechanism of apatite-induced precipitation on 45S5 glass pellets coated with a natural-derived polymer

    Science.gov (United States)

    Araújo, Marco; Miola, Marta; Bertone, Elisa; Baldi, Giovanni; Perez, Javier; Verné, Enrica

    2015-10-01

    In this work, the bioactive glass 45S5 (also known by its commercial name Bioglass®) was successfully dip-coated by a natural derived biopolymer, increasing its apatite-forming ability. The biopolymer was shown to accelerate the first stages of bioactivity, inducing a fast transition to step 4 (formation of amorphous Casbnd P layer) in the apatite-forming ability mechanism. The faster precipitation of Ca/P crystals in the coated samples resulted in the formation of an intermediate amorphous octacalcium phosphate, which later transforms into an apatite layer with high thickness. The effect of the thickness of the coating was also studied on samples coated with polymer suspensions of different concentrations (0.15% and 1.5%, w/v), revealing that the kinetics of formation of the final hydroxycarbonate apatite layer increases with the thickness of the coating. The mechanism by which this apatite-forming ability is accelerated was also investigated, revealing that certain functional groups present in the structure of the polymer allow it to act as an organic matrix and preferential nucleation site for the growth of the hydroxycarbonate apatite layer.

  18. Graphene crystal growth by thermal precipitation of focused ion beam induced deposition of carbon precursor via patterned-iron thin layers

    Directory of Open Access Journals (Sweden)

    Rius Gemma

    2014-01-01

    Full Text Available Recently, relevant advances on graphene as a building block of integrated circuits (ICs have been demonstrated. Graphene growth and device fabrication related processing has been steadily and intensively powered due to commercial interest; however, there are many challenges associated with the incorporation of graphene into commercial applications which includes challenges associated with the synthesis of this material. Specifically, the controlled deposition of single layer large single crystal graphene on arbitrary supports, is particularly challenging. Previously, we have reported the first demonstration of the transformation of focused ion beam induced deposition of carbon (FIBID-C into patterned graphitic layers by metal-assisted thermal treatment (Ni foils. In this present work, we continue exploiting the FIBID-C approach as a route for graphene deposition. Here, thin patterned Fe layers are used for the catalysis of graphenization and graphitization. We demonstrate the formation of high quality single and few layer graphene, which evidences, the possibility of using Fe as a catalyst for graphene deposition. The mechanism is understood as the minute precipitation of atomic carbon after supersaturation of some iron carbides formed under a high temperature treatment. As a consequence of the complete wetting of FIBID-C and patterned Fe layers, which enable graphene growth, the as-deposited patterns do not preserve their original shape after the thermal treatment

  19. Diet-induced bacterial immunogens in the gastrointestinal tract of dairy cows: Impacts on immunity and metabolism

    Directory of Open Access Journals (Sweden)

    Zhou Jun

    2011-08-01

    Full Text Available Abstract Dairy cows are often fed high grain diets to meet the energy demand for high milk production or simply due to a lack of forages at times. As a result, ruminal acidosis, especially subacute ruminal acidosis (SARA, occurs frequently in practical dairy production. When SARA occurs, bacterial endotoxin (or lipopolysaccharide, LPS is released in the rumen and the large intestine in a large amount. Many other bacterial immunogens may also be released in the digestive tract following feeding dairy cows diets containing high proportions of grain. LPS can be translocated into the bloodstream across the epithelium of the digestive tract, especially the lower tract, due to possible alterations of permeability and injuries of the epithelial tissue. As a result, the concentration of blood LPS increases. Immune responses are subsequently caused by circulating LPS, and the systemic effects include increases in concentrations of neutrophils and the acute phase proteins such as serum amyloid-A (SAA, haptoglobin (Hp, LPS binding protein (LBP, and C-reactive protein (CRP in blood. Entry of LPS into blood can also result in metabolic alterations. Blood glucose and nonesterified fatty acid concentrations are enhanced accompanying an increase of blood LPS after increasing the amount of grain in the diet, which adversely affects feed intake of dairy cows. As the proportions of grain in the diet increase, patterns of plasma β-hydoxybutyric acid, cholesterol, and minerals (Ca, Fe, and Zn are also perturbed. The bacterial immunogens can also lead to reduced supply of nutrients for synthesis of milk components and depressed functions of the epithelial cells in the mammary gland. The immune responses and metabolic alterations caused by circulating bacterial immunogens will exert an effect on milk production. It has been demonstrated that increases in concentrations of ruminal LPS and plasma acute phase proteins (CRP, SAA, and LBP are associated with declines in

  20. Bacterial Stationary-State Mutagenesis and Mammalian Tumorigenesis as Stress-Induced Cellular Adaptations and the Role of Epigenetics

    OpenAIRE

    Karpinets, TV; Greenwood, DJ; Pogribny, IP; Samatova, NF

    2006-01-01

    Mechanisms of cellular adaptation may have some commonalities across different organisms. Revealing these common mechanisms may provide insight in the organismal level of adaptation and suggest solutions to important problems related to the adaptation. An increased rate of mutations, referred as the mutator phenotype, and beneficial nature of these mutations are common features of the bacterial stationary-state mutagenesis and of the tumorigenic transformations in mammalian cells. We argue th...

  1. Surfactant improves lung function and mitigates bacterial growth in immature ventilated rabbits with experimentally induced neonatal group B streptococcal pneumonia

    OpenAIRE

    Herting, E.; Sun, B.; Jarstrand, C; Curstedt, T; Robertson, B.

    1997-01-01

    Aims—To study the influence of surfactant on lung function and bacterial proliferation in immature newborn rabbits with experimental group B streptococcal (GBS) pneumonia.
METHODS—Preterm rabbit fetuses (gest-ational age 28 days) underwent tracheotomy and were mechanically ventilated in a warmed body plethysmograph that permitted measurement of lung-thorax compliance. Fifteen minutes after the onset of ventilation the animals received either GBS or saline intratracheally; at 30 minutes, a bol...

  2. Radiation-induced grafting of vinylbenzyltrimethylammonium chloride (VBT) onto cotton fabric and study of its anti-bacterial activities

    International Nuclear Information System (INIS)

    Mutual radiation grafting technique using 60Co gamma radiation has been used to carry out grafting of vinylbenzyltrimethylammonium chloride (VBT) onto cotton cellulose substrate. Grafting yield increased with radiation dose and decreased with dose rate but was adversely affected by the presence of O2 and salts of Fe2+ and Cu2+. However, the presence of an acid did not affect grafting in the concentration range studied. The effect of organic solvents like methanol, ethanol, n-propanol, iso-propanol, tert-butanol on grafting yield was investigated in the mixed aqueous solvent system. The VBT grafted cotton samples showed significantly higher water uptake and water retention properties and possessed excellent anti-bacterial activity against strains like Escherichia coli and Staphylococcus aureus. Samples with 25% grafting extent showed 6 log cycles reduction in bacterial counts within 6 h of exposure time. The anti-bacterial activity of the grafted cotton samples was retained after several cycles of washing and drying in a commercial detergent powder

  3. Strontium Co-precipitation During Biomineralization of Calcite in Porous Media Using Differing Treatment Strategies

    Science.gov (United States)

    Lauchnor, E. G.; Schultz, L.; Mitchell, A.; Cunningham, A. B.; Gerlach, R.

    2013-12-01

    the ureolytic biofilms and also insured that bacterially-induced mineralization was still occurring after 60 days of operation. Batch rate experiments demonstrated the effective use of alternative sources of substrates for biomineralization, which are economical for use in field-scale remediation. Fertilizer has been shown to be an effective urea source and several economical carbon and nutrient sources such as molasses and whey are being evaluated for stimulating ureolytic microorganisms. This research demonstrates on a bench scale the use of different injection strategies to control precipitation of calcium carbonate, as well as the feasibility of strontium co-precipitation in porous media. The ongoing optimization of strontium co-precipitation will lead to additional work on potential remediation of other heavy metal groundwater contaminants.

  4. Formate oxidation-driven calcium carbonate precipitation by Methylocystis parvus OBBP.

    Science.gov (United States)

    Ganendra, Giovanni; De Muynck, Willem; Ho, Adrian; Arvaniti, Eleni Charalampous; Hosseinkhani, Baharak; Ramos, Jose Angel; Rahier, Hubert; Boon, Nico

    2014-08-01

    Microbially induced carbonate precipitation (MICP) applied in the construction industry poses several disadvantages such asammonia release to the air and nitric acid production. An alternative MICP from calcium formate by Methylocystis parvus OBBP is presented here to overcome these disadvantages. To induce calcium carbonate precipitation, M. parvus was incubated at different calcium formate concentrations and starting culture densities. Up to 91.4% ± 1.6% of the initial calcium was precipitated in the methane-amended cultures compared to 35.1% ± 11.9% when methane was not added. Because the bacteria could only utilize methane for growth, higher culture densities and subsequently calcium removals were exhibited in the cultures when methane was added. A higher calcium carbonate precipitate yield was obtained when higher culture densities were used but not necessarily when more calcium formate was added. This was mainly due to salt inhibition of the bacterial activity at a high calcium formate concentration. A maximum 0.67 ± 0.03 g of CaCO3 g of Ca(CHOOH)2(-1) calcium carbonate precipitate yield was obtained when a culture of 10(9) cells ml(-1) and 5 g of calcium formate liter(-)1 were used. Compared to the current strategy employing biogenic urea degradation as the basis for MICP, our approach presents significant improvements in the environmental sustainability of the application in the construction industry. PMID:24837386

  5. Delayed development induced by toxicity to the host can be inherited by a bacterial-dependent, transgenerational effect

    OpenAIRE

    Fridmann-Sirkis, Yael; Stern, Shay; Elgart, Michael; Galili, Matana; Zeisel, Amit; Shental, Noam; Soen, Yoav

    2014-01-01

    Commensal gut bacteria in many species including flies are integral part of their host, and are known to influence its development and homeostasis within generation. Here we report an unexpected impact of host–microbe interactions, which mediates multi-generational, non-Mendelian inheritance of a stress-induced phenotype. We have previously shown that exposure of fly larvae to G418 antibiotic induces transgenerationally heritable phenotypes, including a delay in larval development, gene induc...

  6. A novel multi-stage subunit vaccine against paratuberculosis induces significant immunity and reduces bacterial burden in tissues (P4304)

    DEFF Research Database (Denmark)

    Thakur, Aneesh; Aagaard, Claus; Riber, Ulla;

    2013-01-01

    Effective control of paratuberculosis is hindered by lack of a vaccine preventing infection, transmission and without diagnostic interference with tuberculosis. We have developed a novel multi-stage recombinant subunit vaccine in which a fusion of four early expressed MAP antigens is combined with...... characterized by a significant containment of bacterial burden in gut tissues compared to non-vaccinated animals. There was no cross-reaction with bovine tuberculosis in vaccinated animals. This novel multi-stage vaccine has the potential to become a marker vaccine for paratuberculosis....

  7. Bacterial extracellular lignin peroxidase

    Science.gov (United States)

    Crawford, Donald L.; Ramachandra, Muralidhara

    1993-01-01

    A newly discovered lignin peroxidase enzyme is provided. The enzyme is obtained from a bacterial source and is capable of degrading the lignin portion of lignocellulose in the presence of hydrogen peroxide. The enzyme is extracellular, oxidative, inducible by lignin, larch wood xylan, or related substrates and capable of attacking certain lignin substructure chemical bonds that are not degradable by fungal lignin peroxidases.

  8. Comprehensive Proteomic and Metabolomic Signatures of Nontypeable Haemophilus influenzae-Induced Acute Otitis Media Reveal Bacterial Aerobic Respiration in an Immunosuppressed Environment.

    Science.gov (United States)

    Harrison, Alistair; Dubois, Laura G; St John-Williams, Lisa; Moseley, M Arthur; Hardison, Rachael L; Heimlich, Derek R; Stoddard, Alexander; Kerschner, Joseph E; Justice, Sheryl S; Thompson, J Will; Mason, Kevin M

    2016-03-01

    A thorough understanding of the molecular details of the interactions between bacteria and host are critical to ultimately prevent disease. Recent technological advances allow simultaneous analysis of host and bacterial protein and metabolic profiles from a single small tissue sample to provide insight into pathogenesis. We used the chinchilla model of human otitis media to determine, for the first time, the most expansive delineation of global changes in protein and metabolite profiles during an experimentally induced disease. After 48 h of infection with nontypeable Haemophilus influenzae, middle ear tissue lysates were analyzed by high-resolution quantitative two-dimensional liquid chromatography-tandem mass spectrometry. Dynamic changes in 105 chinchilla proteins and 66 metabolites define the early proteomic and metabolomic signature of otitis media. Our studies indicate that establishment of disease coincides with actin morphogenesis, suppression of inflammatory mediators, and bacterial aerobic respiration. We validated the observed increase in the actin-remodeling complex, Arp2/3, and experimentally showed a role for Arp2/3 in nontypeable Haemophilus influenzae invasion. Direct inhibition of actin branch morphology altered bacterial invasion into host epithelial cells, and is supportive of our efforts to use the information gathered to modify outcomes of disease. The twenty-eight nontypeable Haemophilus influenzae proteins identified participate in carbohydrate and amino acid metabolism, redox homeostasis, and include cell wall-associated metabolic proteins. Quantitative characterization of the molecular signatures of infection will redefine our understanding of host response driven developmental changes during pathogenesis. These data represent the first comprehensive study of host protein and metabolite profiles in vivo in response to infection and show the feasibility of extensive characterization of host protein profiles during disease. Identification of

  9. A plant natriuretic peptide-like gene in the bacterial pathogen Xanthomonas axonopodis may induce hyper-hydration in the plant host: a hypothesis of molecular mimicry

    Directory of Open Access Journals (Sweden)

    Sayed Muhammed

    2004-03-01

    Full Text Available Abstract Background Plant natriuretic peptides (PNPs are systemically mobile molecules that regulate homeostasis at nanomolar concentrations. PNPs are up-regulated under conditions of osmotic stress and PNP-dependent processes include changes in ion transport and increases of H2O uptake into protoplasts and whole tissue. Presentation of the hypothesis The bacterial citrus pathogen Xanthomonas axonopodis pv. Citri str. 306 contains a gene encoding a PNP-like protein. We hypothesise that this bacterial protein can alter plant cell homeostasis and thus is likely to represent an example of molecular mimicry that enables the pathogen to manipulate plant responses in order to bring about conditions favourable to the pathogen such as the induced plant tissue hyper-hydration seen in the wet edged lesions associated with Xanthomonas axonopodis infection. Testing the hypothesis We found a Xanthomonas axonopodis PNP-like protein that shares significant sequence similarity and identical domain organisation with PNPs. We also observed a significant excess of conserved residues between the two proteins within the domain previously identified as being sufficient to induce biological activity. Structural modelling predicts identical six stranded double-psi β barrel folds for both proteins thus supporting the hypothesis of similar modes of action. No significant similarity between the Xanthomonas axonopodis protein and other bacterial proteins from GenBank was found. Sequence similarity of the Xanthomonas axonopodis PNP-like protein with the Arabidopsis thaliana PNP (AtPNP-A, shared domain organisation and incongruent phylogeny suggest that the PNP-gene may have been acquired by the bacteria in an ancient lateral gene transfer event. Finally, activity of a recombinant Xanthomonas axonopodis protein in plant tissue and changes in symptoms induced by a Xanthomonas axonopodis mutant with a knocked-out PNP-like gene will be experimental proof of molecular mimicry

  10. A new pharmacological agent (AKB-4924) stabilizes hypoxia inducible factor-1 (HIF-1) and increases skin innate defenses against bacterial infection.

    Science.gov (United States)

    Okumura, Cheryl Y M; Hollands, Andrew; Tran, Dan N; Olson, Joshua; Dahesh, Samira; von Köckritz-Blickwede, Maren; Thienphrapa, Wdee; Corle, Courtney; Jeung, Seung Nam; Kotsakis, Anna; Shalwitz, Robert A; Johnson, Randall S; Nizet, Victor

    2012-09-01

    Hypoxia inducible factor-1 (HIF-1) is a transcription factor that is a major regulator of energy homeostasis and cellular adaptation to low oxygen stress. HIF-1 is also activated in response to bacterial pathogens and supports the innate immune response of both phagocytes and keratinocytes. In this work, we show that a new pharmacological compound AKB-4924 increases HIF-1 levels and enhances the antibacterial activity of phagocytes and keratinocytes against both methicillin-sensitive and methicillin-resistant strains of Staphylococcus aureus in vitro. AKB-4924 is also effective in stimulating the killing capacity of keratinocytes against the important opportunistic skin pathogens Pseudomonas aeruginosa and Acinetobacter baumanii. The effect of AKB-4924 is mediated through the activity of host cells, as the compound exerts no direct antimicrobial activity. Administered locally as a single agent, AKB-4924 limits S. aureus proliferation and lesion formation in a mouse skin abscess model. This approach to pharmacologically boost the innate immune response via HIF-1 stabilization may serve as a useful adjunctive treatment for antibiotic-resistant bacterial infections. PMID:22371073

  11. Bacterial lipoprotein-induced self-tolerance and cross-tolerance to LPS are associated with reduced IRAK-1 expression and MyD88-IRAK complex formation.

    LENUS (Irish Health Repository)

    Li, Chong Hui

    2012-02-03

    Tolerance to bacterial cell-wall components may represent an essential regulatory mechanism during bacterial infection. We have demonstrated previously that the inhibition of nuclear factor (NF)-kappaB and mitogen-activated protein kinase activation was present in bacterial lipoprotein (BLP) self-tolerance and its cross-tolerance to lipopolysaccharide (LPS). In this study, the effect of BLP-induced tolerance on the myeloid differentiation factor 88 (MyD88)-dependent upstream signaling pathway for NF-kappaB activation in vitro was examined further. When compared with nontolerant human monocytic THP-1 cells, BLP-tolerant cells had a significant reduction in tumor necrosis factor alpha (TNF-alpha) production in response to a high-dose BLP (86+\\/-12 vs. 6042+\\/-245 ng\\/ml, P < 0.01) or LPS (341+\\/-36 vs. 7882+\\/-318 ng\\/ml, P < 0.01) stimulation. The expression of Toll-like receptor 2 (TLR2) protein was down-regulated in BLP-tolerant cells, whereas no significant differences in TLR4, MyD88, interleukin-1 receptor-associated kinase 4 (IRAK-4), and TNF receptor-associated factor 6 expression were observed between nontolerant and BLP-tolerant cells, as confirmed by Western blot analysis. The IRAK-1 protein was reduced markedly in BLP-tolerant cells, although IRAK-1 mRNA expression remained unchanged as revealed by real-time reverse transcriptase-polymerase chain reaction analysis. Furthermore, decreased MyD88-IRAK immunocomplex formation, as demonstrated by immunoprecipitation, was observed in BLP-tolerant cells following a second BLP or LPS stimulation. BLP pretreatment also resulted in a marked inhibition in total and phosphorylated inhibitor of kappaB-alpha (IkappaB-alpha) expression, which was not up-regulated by subsequent BLP or LPS stimulation. These results demonstrate that in addition to the down-regulation of TLR2 expression, BLP tolerance is associated with a reduction in IRAK-1 expression, MyD88-IRAK association, and IkappaB-alpha phosphorylation. These

  12. Biochemical changes induced by salt stress in halotolerant bacterial isolates are media dependent as well as species specific.

    Science.gov (United States)

    Joghee, Nidhya Nadarajan; Jayaraman, Gurunathan

    2016-01-01

    Halophilic bacteria respond to salt stress by regulating the cytosolic pools of organic solutes to achieve osmotic equilibrium. In order to understand the metabolic regulation of these organic solutes, for the first time, we have investigated the effect of salt on growth and biochemical changes in four major moderately halophilic bacterial strains isolated from a saltern region of the Kumta coast, India. The strains under study were Halomonas hydrothermalis VITP9, Bacillus aquimaris VITP4, Planococcus maritimus VITP21, and Virgibacillus dokdonensis VITP14, which exhibited similar salt tolerance (0% to 10% w/v NaCl) with optimal growth at 5% w/v NaCl. Biochemical analysis showed that the total intracellular organic solutes increased significantly with increasing NaCl concentration in the growth medium, and the compositions of the solutes were dependent on the type of strain and also on the nutrient richness of the growth medium. Glutamic acid levels increased in all the strains under salt stress, indicating the significance of glutamic acid as the anionic counterpart of K(+)/Na(+) ions and precursor for other synthesized nitrogenous osmolytes. Though initial studies were performed with thin-layer chromatography, mass spectrometry was used to identify the major solutes accumulated by the strains under salt stress, such as proline (VITP4), ectoine (VITP14 and VITP9), and sugars (VITP21) under minimal medium and glycine betaine (by all the strains under study) under complex growth medium conditions. Such comparative study on the stress-dependent metabolic differences of different microbes, under identical experimental condition, helps to identify possible bacterial sources for the production of industrially important solutes. PMID:25286020

  13. Effect of Bacterial Lipopolysaccharide Contamination on Gutta Percha- versus Resilon-Induced Human Monocyte Cell Line Toxicity.

    Directory of Open Access Journals (Sweden)

    Jamshid Hadjati

    2015-04-01

    Full Text Available Cytotoxic effects of obturation materials were tested in presence and absence of endotoxin on human monocytes in vitro.Human monocytes from THP-1 cell line were cultured. Three millimeters from the tip of each Resilon and gutta percha points were cut and directly placed at the bottom of the culture wells. Cultured cells were exposed to gutta percha (groups G1 and G2 and Resilon (R1 and R2. Ten μg/ml bacterial lipopolysaccharide (LPS was added to the culture wells in groups G1 and R1. Positive control included the bacterial LPS without the root canal filling material and the negative control contained the cells in culture medium only. Viability of cells was tested in all groups after 24, 48, and 72 hours using the methylthiazolyldiphenyl-tetrazolium bromide (MTT assay for at least 3 times to obtain reproducible results. Optical density values were read and the data were analyzed using three-way ANOVA and post hoc statistical test.The results showed that cells in G2 had the lowest rate of viability at 24 hours, but the lowest rate of viable cells was recorded in G1 at 48 and 72 hours. The effect of LPS treatment was not statistically significant. Resilon groups showed cell viability values higher than those of gutta percha groups, although statistically non-significant (P=0.105. Cell viability values were lower in gutta percha than Resilon groups when LPS-treated and LPS-untreated groups were compared independently at each time point.It could be concluded that none of the tested root canal filling materials had toxic effects on cultured human monocyte cells whether in presence or absence of LPS contamination.

  14. Rumen microbial and fermentation characteristics are affected differently by bacterial probiotic supplementation during induced lactic and subacute acidosis in sheep

    OpenAIRE

    Lettat Abderzak; Nozière Pierre; Silberberg Mathieu; Morgavi Diego P; Berger Claudette; Martin Cécile

    2012-01-01

    Abstract Background Ruminal disbiosis induced by feeding is the cause of ruminal acidosis, a digestive disorder prevalent in high-producing ruminants. Because probiotic microorganisms can modulate the gastrointestinal microbiota, propionibacteria- and lactobacilli-based probiotics were tested for their effectiveness in preventing different forms of acidosis. Results Lactic acidosis, butyric and propionic subacute ruminal acidosis (SARA) were induced by feed chalenges in three groups of four w...

  15. Vaccination with Brucella abortus recombinant in vivo-induced antigens reduces bacterial load and promotes clearance in a mouse model for infection.

    Directory of Open Access Journals (Sweden)

    Jake E Lowry

    Full Text Available Current vaccines used for the prevention of brucellosis are ineffective in inducing protective immunity in animals that are chronically infected with Brucella abortus, such as elk. Using a gene discovery approach, in vivo-induced antigen technology (IVIAT on B. abortus, we previously identified ten loci that encode products up-regulated during infection in elk and consequently may play a role in virulence. In our present study, five of the loci (D15, 0187, VirJ, Mdh, AfuA were selected for further characterization and compared with three additional antigens with virulence potential (Hia, PrpA, MltA. All eight genes were PCR-amplified from B. abortus and cloned into E. coli. The recombinant products were then expressed, purified, adjuvanted, and delivered subcutaneously to BALB/c mice. After primary immunization and two boosts, mice were challenged i.p. with 5 x 10⁴ CFU of B. abortus strain 19. Spleens from challenged animals were harvested and bacterial loads determined by colony count at various time points. While vaccination with four of the eight individual proteins appeared to have some effect on clearance kinetics, mice vaccinated with recombinant Mdh displayed the most significant reduction in bacterial colonization. Furthermore, mice immunized with Mdh maintained higher levels of IFN-γ in spleens compared to other treatment groups. Collectively, our in vivo data gathered from the S19 murine colonization model suggest that vaccination with at least three of the IVIAT antigens conferred an enhanced ability of the host to respond to infection, reinforcing the utility of this methodology for the identification of potential vaccine candidates against brucellosis. Mechanisms for immunity to one protein, Mdh, require further in vitro exploration and evaluation against wild-type B. abortus challenge in mice, as well as other hosts. Additional studies are being undertaken to clarify the role of Mdh and other IVI antigens in B. abortus virulence

  16. Vaccination with Brucella abortus recombinant in vivo-induced antigens reduces bacterial load and promotes clearance in a mouse model for infection.

    Science.gov (United States)

    Lowry, Jake E; Isaak, Dale D; Leonhardt, Jack A; Vernati, Giulia; Pate, Jessie C; Andrews, Gerard P

    2011-01-01

    Current vaccines used for the prevention of brucellosis are ineffective in inducing protective immunity in animals that are chronically infected with Brucella abortus, such as elk. Using a gene discovery approach, in vivo-induced antigen technology (IVIAT) on B. abortus, we previously identified ten loci that encode products up-regulated during infection in elk and consequently may play a role in virulence. In our present study, five of the loci (D15, 0187, VirJ, Mdh, AfuA) were selected for further characterization and compared with three additional antigens with virulence potential (Hia, PrpA, MltA). All eight genes were PCR-amplified from B. abortus and cloned into E. coli. The recombinant products were then expressed, purified, adjuvanted, and delivered subcutaneously to BALB/c mice. After primary immunization and two boosts, mice were challenged i.p. with 5 x 10⁴ CFU of B. abortus strain 19. Spleens from challenged animals were harvested and bacterial loads determined by colony count at various time points. While vaccination with four of the eight individual proteins appeared to have some effect on clearance kinetics, mice vaccinated with recombinant Mdh displayed the most significant reduction in bacterial colonization. Furthermore, mice immunized with Mdh maintained higher levels of IFN-γ in spleens compared to other treatment groups. Collectively, our in vivo data gathered from the S19 murine colonization model suggest that vaccination with at least three of the IVIAT antigens conferred an enhanced ability of the host to respond to infection, reinforcing the utility of this methodology for the identification of potential vaccine candidates against brucellosis. Mechanisms for immunity to one protein, Mdh, require further in vitro exploration and evaluation against wild-type B. abortus challenge in mice, as well as other hosts. Additional studies are being undertaken to clarify the role of Mdh and other IVI antigens in B. abortus virulence and induction of

  17. Bacterial Vaginosis

    Science.gov (United States)

    ... 586. Related Content STDs during Pregnancy Fact Sheet Pregnancy and HIV, Viral Hepatitis, and STD Prevention Pelvic Inflammatory Disease ( ... Bacterial Vaginosis (BV) Chlamydia Gonorrhea Genital Herpes Hepatitis HIV/AIDS & STDs Human Papillomavirus ... STDs See Also Pregnancy Reproductive ...

  18. Bacterial Meningitis

    Science.gov (United States)

    ... Schedules Preteen & Teen Vaccines Meningococcal Disease Sepsis Bacterial Meningitis Recommend on Facebook Tweet Share Compartir On this ... serious disease. Laboratory Methods for the Diagnosis of Meningitis This manual summarizes laboratory methods used to isolate, ...

  19. Prostatitis - bacterial

    Science.gov (United States)

    Any bacteria that can cause a urinary tract infection can cause acute bacterial prostatitis. Infections spread through sexual contact can cause prostatitis. These include chlamydia and gonorrhea . Sexually transmitted ...

  20. Bacterial Conjunctivitis

    OpenAIRE

    Köhle, Ülkü; Kükner, Şahap

    2003-01-01

    Conjunctivitis is an infection of the conjunctiva, generally characterized by irritation, itching, foreign body sensation, tearing and discharge. Bacterial conjunctivitis may be distinguished from other types of conjunctivitis by the presence of yellow–white mucopurulent discharge. It is the most common form of ocular infection all around the world. Staphylococcus species are the most common bacterial pathogenes, followed by Streptococcus pneumoniae and Haemophilus i...

  1. Green synthesis of bacterial mediated anti-proliferative gold nanoparticles: inducing mitotic arrest (G2/M phase) and apoptosis (intrinsic pathway)

    Science.gov (United States)

    Ganesh Kumar, C.; Poornachandra, Y.; Chandrasekhar, Cheemalamarri

    2015-11-01

    The physiochemical and biological properties of microbial derived gold nanoparticles have potential applications in various biomedical domains as well as in cancer therapy. We have fabricated anti-proliferative bacterial mediated gold nanoparticles (b-Au NPs) using a culture supernatant of Streptomyces clavuligerus and later characterized them by UV-visible, TEM, DLS, XRD and FT-IR spectroscopic techniques. The capping agent responsible for the nanoparticle formation was characterized based on SDS-PAGE and MALDI-TOF-MS analyses. They were tested for anticancer activity in A549, HeLa and DU145 cell lines. The biocompatibility and non-toxic nature of the nanoparticles were tested on normal human lung cell line (MRC-5). The b-Au NPs induced the cell cycle arrest in G2/M phase and also inhibited the microtubule assembly in DU145 cells. Mechanistic studies, such as ROS, MMP, Cyt-c, GSH, caspases 9, 8 and 3 activation and the Annexin V-FITC staining, along with the above parameters tested provided sufficient evidence that the b-Au NPs induced apoptosis through the intrinsic pathway. The results supported the use of b-Au NPs for future therapeutic application in cancer therapy and other biomedical applications.The physiochemical and biological properties of microbial derived gold nanoparticles have potential applications in various biomedical domains as well as in cancer therapy. We have fabricated anti-proliferative bacterial mediated gold nanoparticles (b-Au NPs) using a culture supernatant of Streptomyces clavuligerus and later characterized them by UV-visible, TEM, DLS, XRD and FT-IR spectroscopic techniques. The capping agent responsible for the nanoparticle formation was characterized based on SDS-PAGE and MALDI-TOF-MS analyses. They were tested for anticancer activity in A549, HeLa and DU145 cell lines. The biocompatibility and non-toxic nature of the nanoparticles were tested on normal human lung cell line (MRC-5). The b-Au NPs induced the cell cycle arrest in G2

  2. Protective Capacity of Resveratrol, a Natural Polyphenolic Compound, against Deoxynivalenol-Induced Intestinal Barrier Dysfunction and Bacterial Translocation.

    Science.gov (United States)

    Ling, Ka-Ho; Wan, Murphy Lam Yim; El-Nezami, Hani; Wang, Mingfu

    2016-05-16

    Contamination of food/feedstuffs by mycotoxins is a serious problem worldwide, causing severe economic losses and serious health problems in animals/humans. Deoxynivalenol (DON) is a major mycotoxin contaminant and is known to impair intestinal barrier function. Grapes and red wine are rich in polyphenols, such as resveratrol (RES), which has striking antioxidant and anti-inflammatory activities. RES is a food-derived component; therefore, it may be simultaneously present with DON in the gastrointestinal tract. The aim of this study was to explore in vitro protective effects of RES against DON-induced intestinal damage. The results showed that RES could protect DON-induced bacteria translocation because of enhanced of intestinal barrier function by restoring the DON-induced decrease in transepithelial electrical resistance and increase in paracellular permeability. Further mechanistic studies demonstrated that RES protects against DON-induced barrier dysfunction by promoting the assembly of claudin-4 in the tight junction complex. This is probably mediated through modulation of IL-6 and IL-8 secretion via mitogen-activated protein kinase-dependent pathways. Our results imply that RES can protect against DON-induced intestinal damage and that RES may be used as a novel dietary intervention strategy to reduce DON toxicity in animals/humans. PMID:27058607

  3. Gamma Irradiation-Induced Mutation for the Improvement of Josapine Pineapple Against Bacterial Heart Rot Disease and Improved Fruit Quality

    International Nuclear Information System (INIS)

    Bacterial heart rot disease, caused by Erwinia chrysanthemi, is one of the most serious diseases of the susceptible cultivars of pineapple in Malaysia, namely, Josapine, Sarawak, Gandul and N36. Using acute irradiation of Gamma-rays and in vitro cultured meristems, selection of resistant mutants to bacterial heart rot disease with improved fruit quality has been carried out in the most popular variety, Josapine. Suckers were collected from the experimental field plot at MARDI Research Station in Pontian Johor. Explants from meristem tissues were transferred to MS (Murashige and Skoog) solid media with 2.5mg/l benzyl aminopurine (BA) and incubated at 23oC at a 16-hour photoperiod. After 10 days in culture, meristem explants were irradiated with a series of Gamma-ray doses of 0, 20, 40, 60, 80, 100, 120, 140 and 160Gy and radiosensitivity was investigated based on shoot formation and survival rate. Radiosensitivity of meristem tissues producing shoots was inversely proportional to the irradiation dose. As the dose was increased mutations appeared more frequently, indicated by the formation of albino and striped leaves. The dose required for 50% lethality (LD50) and 100% (LD100) of meristem tissues for shoot formation were 40Gy and 83Gy, respectively. On the other hand, the LD50 and LD100 for survival rate were 77Gy and 147Gy, respectively. Suitable doses for mutation induction are suggested in the lower region alongside with LD50 curve, where multiple shoots are regenerated from the irradiated meristem tissues. Therefore, for field screening, four lower doses of gamma irradiation viz. 10, 20, 30 and 40Gy were applied. The limit for shoot induction from irradiated explants generally agreed with the LD100 curve. Shoots derived from irradiated meristem explants at 10, 20, 30 and 40Gy were sub-cultured up to M1V5 to minimize chimerism. Multiplication of irradiated shoots was carried out in Temporary Immersion Bioreactor System using MS liquid media with 5 mg/l BA and

  4. Dynamic precipitation of Mg{sub 2}Si induced by temperature and strain during hot extrusion and its impact on microstructure and mechanical properties of near eutectic Al–Si–Mg–V alloy

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Yuna; Liao, Hengcheng, E-mail: hengchengliao@seu.edu.cn; Liu, Yabing; Zhou, Kexin

    2014-09-22

    Dynamic precipitation of Mg{sub 2}Si and its impact on the microstructures and mechanical properties of Al–12.5 wt% Si–0.6 wt% Mg–0.1 wt% V alloy were studied by applying different extrusion temperatures and extrusion ratios. Optical microscopy (OM), scanning electron microscopy (SEM) and electron backscatter diffraction (EBSD) observations were used to characterize the microstructure evolution. Tensile properties and the Brinell hardness were tested. Results show that both decreasing extrusion temperature (temperature-induced) and increasing extrusion ratio (strain-induced) of the alloy will result in dynamic precipitation of Mg{sub 2}Si particles. Dynamic precipitation of Mg{sub 2}Si leads to a considerable coarsening of the recrystallized grains. Yield strength (YS) and ultimate tensile strength (UTS) of the sample extruded at lower temperature (400 °C) are more than 50% lower than that extruded at higher temperature (540 °C) with the same extrusion ratio of 16. With increasing of extrusion ratio from 16 to 50, both YS and UTS of the samples decrease nearly 30% when extruded at the same temperature of 540 °C.

  5. Chlor-alkali plant contamination of Aussa River sediments induced a large Hg-resistant bacterial community

    Science.gov (United States)

    Baldi, Franco; Marchetto, Davide; Gallo, Michele; Fani, Renato; Maida, Isabel; Covelli, Stefano; Fajon, Vesna; Zizek, Suzana; Hines, Mark; Horvat, Milena

    2012-11-01

    A closed chlor-alkali plant (CAP) discharged Hg for decades into the Aussa River, which flows into Marano Lagoon, resulting in the large-scale pollution of the lagoon. In order to get information on the role of bacteria as mercury detoxifying agents, analyses of anions in the superficial part (0-1 cm) of sediments were conducted at four stations in the Aussa River. In addition, measurements of biopolymeric carbon (BPC) as a sum of the carbon equivalent of proteins (PRT), lipids (LIP), and carbohydrates (CHO) were performed to correlate with bacterial biomass such as the number of aerobic heterotrophic cultivable bacteria and their percentage of Hg-resistant bacteria. All these parameters were used to assess the bioavailable Hg fraction in sediments and the potential detoxification activity of bacteria. In addition, fifteen isolates were characterized by a combination of molecular techniques, which permitted their assignment into six different genera. Four out of fifteen were Gram negative with two strains of Stenotrophomonas maltophilia, one Enterobacter sp., and one strain of Brevibacterium frigoritolerans. The remaining strains (11) were Gram positive belonging to the genera Bacillus and Staphylococcus. We found merA genes in only a few isolates. Mercury volatilization from added HgCl2 and the presence of plasmids with the merA gene were also used to confirm Hg reductase activity. We found the highest number of aerobic heterotrophic Hg-resistant bacteria (one order magnitude higher) and the highest number of Hg-resistant species (11 species out of 15) at the confluence of the River Aussa and Banduzzi's channel, which transport Hg from the CAP, suggesting that Hg is strongly detoxified [reduced to Hg(0)] at this location.

  6. Immunity induced shortly after DNA vaccination of rainbow trout against rhabdoviruses protects against heterologous virus but not against bacterial pathogens

    DEFF Research Database (Denmark)

    Lorenzen, Niels; Lorenzen, Ellen; Einer-Jensen, Katja; LaPatra, Scott E.

    2002-01-01

    It was recently reported that DNA vaccination of rainbow trout fingerlings against viral hemorrhagic septicaemia virus (VHSV) induced protection within 8 days after intramuscular injection of plasmid DNA. In order to analyse the specificity of this early immunity, fish were vaccinated with plasmid...... DNA encoding the VHSV or the infectious haematopoietic necrosis virus (IHNV) glycoprotein genes and later challenged with homologous or heterologous pathogens. Challenge experiments revealed that immunity established shortly after vaccination was cross-protective between the two viral pathogens...

  7. Human Langerhans cells control Th cells via programmed death-ligand 1 in response to bacterial stimuli and nickel-induced contact allergy.

    Directory of Open Access Journals (Sweden)

    Manuel Hitzler

    Full Text Available Langerhans cells (LCs are suspected to initiate inflammatory immune responses to contact allergens and pathogenic bacteria. In chronic infectious diseases, programmed death ligand (PD-L 1 exhibits both inhibitory and costimulatory functions on T cell-mediated activation and tolerance. Here, we investigated the effects of contact allergens and bacterial stimuli on PD-L1 expression in LCs and the effects of altered PD-L1 expression on cytokine release of subsequently cocultured T cells. Monocyte-derived LCs (MoLCs, LCs, and skin sections of patients suffering from allergic contact dermatitis were challenged with nickel and then analyzed for PD-L1 expression by confocal laser scanning microscopy and flow cytometry. In blocking experiments, we found that the release of Th cell specific cytokines was dependent on both stimulation of LCs and inhibition of PD-L1-PD-1 interactions. Stimulation with peptidoglycan (PGN or lipopolysaccharide (LPS and blockage of PD-L1 with a specific antibody triggered the release of high levels of IL-17, IL-22, TNF-α, and IFN-γ in CD4(+T cells. If nickel was used as a stimulus, blockage of PD-L1 led to high amounts of TNF-α and IL-22. A closer look revealed PD-L1-dependent upregulation of IL-17 secretion in FACS-sorted CCR6(+/CCR4(+ T memory cells. In the presence of anti-PD-L1, PGN induced secretion of IFN-γ and IL-17 in total CCR6(+ cells, while nickel triggered secretion of IFN-γ and IL-17 exclusively in CCR6(+/CCR4(+ cells. Our findings suggest that PD-L1 on LCs plays a crucial role in type IV allergic reactions and in response to bacterial stimuli by controlling the nature of inflammatory Th cell responses.

  8. Giardia duodenalis infection reduces granulocyte infiltration in an in vivo model of bacterial toxin-induced colitis and attenuates inflammation in human intestinal tissue.

    Directory of Open Access Journals (Sweden)

    James A Cotton

    Full Text Available Giardia duodenalis (syn. G. intestinalis, G. lamblia is a predominant cause of waterborne diarrheal disease that may lead to post-infectious functional gastrointestinal disorders. Although Giardia-infected individuals could carry as much as 106 trophozoites per centimetre of gut, their intestinal mucosa is devoid of overt signs of inflammation. Recent studies have shown that in endemic countries where bacterial infectious diseases are common, Giardia infections can protect against the development of diarrheal disease and fever. Conversely, separate observations have indicated Giardia infections may enhance the severity of diarrheal disease from a co-infecting pathogen. Polymorphonuclear leukocytes or neutrophils (PMNs are granulocytic, innate immune cells characteristic of acute intestinal inflammatory responses against bacterial pathogens that contribute to the development of diarrheal disease following recruitment into intestinal tissues. Giardia cathepsin B cysteine proteases have been shown to attenuate PMN chemotaxis towards IL-8/CXCL8, suggesting Giardia targets PMN accumulation. However, the ability of Giardia infections to attenuate PMN accumulation in vivo and how in turn this effect may alter the host inflammatory response in the intestine has yet to be demonstrated. Herein, we report that Giardia infection attenuates granulocyte tissue infiltration induced by intra-rectal instillation of Clostridium difficile toxin A and B in an isolate-dependent manner. This attenuation of granulocyte infiltration into colonic tissues paralled decreased expression of several cytokines associated with the recruitment of PMNs. Giardia trophozoite isolates that attenuated granulocyte infiltration in vivo also decreased protein expression of cytokines released from inflamed mucosal biopsy tissues collected from patients with active Crohn's disease, including several cytokines associated with PMN recruitment. These results demonstrate for the first time

  9. Precipitation-Induced Changes in Microstrain and Its Relation with Hardness and Tempering Parameter in 17-4 PH Stainless Steel

    Science.gov (United States)

    Mahadevan, S.; Manojkumar, R.; Jayakumar, T.; Das, C. R.; Rao, B. P. C.

    2016-06-01

    17-4 PH (precipitation hardening) stainless steel is a soft martensitic stainless steel strengthened by aging at appropriate temperature for sufficient duration. Precipitation of copper particles in the martensitic matrix during aging causes coherency strains which improves the mechanical properties, namely hardness and strength of the matrix. The contributions to X-ray diffraction (XRD) profile broadening due to coherency strains caused by precipitation and crystallite size changes due to aging are separated and quantified using the modified Williamson-Hall approach. The estimated normalized mean square strain and crystallite size are used to explain the observed changes in hardness. Microstructural changes observed in secondary electron images are in qualitative agreement with crystallite size changes estimated from XRD profile analysis. The precipitation kinetics in the age-hardening regime and overaged regime are studied from hardness changes and they follow the Avrami kinetics and Wilson's model, respectively. In overaged condition, the hardness changes are linearly correlated to the tempering parameter (also known as Larson-Miller parameter). Similar linear variation is observed between the normalized mean square strain (determined from XRD line profile analysis) and the tempering parameter, in the incoherent regime which is beyond peak microstrain conditions.

  10. Promoting Ti{sub 4}C{sub 2}S{sub 2} strain induced precipitation during asymmetrical hot rolling to improve r value and advantaged texture in Ti stabilized IF steel

    Energy Technology Data Exchange (ETDEWEB)

    Dong, Futao, E-mail: dongft@sina.com [College of Metallurgy and Energy, Hebei United University, Tangshan 063000 (China); Xue, Fei [College of Electrical Engineering, Hebei United University, Tangshan 063000 (China); Du, Linxiu; Liu, Xianghua [The State Key Laboratory of Rolling and Automation, Northeastern University, Shenyang 110819 (China)

    2015-01-25

    Highlights: • We study Ti{sub 4}C{sub 2}S{sub 2} strain induced precipitation in Ti stabilized IF steel. • The PTT diagram is obtained by plotting 1/A{sub r}–time curves. • Hot rolling at the nose of P{sub s} line effectively promotes Ti{sub 4}C{sub 2}S{sub 2} precipitation. • Annealed sheet with promoted Ti{sub 4}C{sub 2}S{sub 2} exhibits higher r value and stronger γ fiber texture. • Adverse impact of tiny TiC has been significantly mitigated. - Abstract: The kinetic of Ti{sub 4}C{sub 2}S{sub 2} strain induced precipitation in a Ti stabilized IF steel was investigated using two stage interrupted compression test with high true strain (0.5). The PTT (precipitation–time–temperature) diagram was obtained by plotting 1/A{sub r}–time curves. TEM (transmission electron microscopy) observation confirmed that the evolution of Ti{sub 4}C{sub 2}S{sub 2} precipitate in the quenched samples of thermal simulation is in good agreement with the PTT diagram. Hot strips were produced at three different rolling temperatures with high strain and slight shear deformation. It was found that hot rolling at the nose temperature of the P{sub s} line of the PTT diagram can effectively promote the precipitation of Ti{sub 4}C{sub 2}S{sub 2} and retard the precipitation of TiC. Cold rolled and annealed sheets from hot strip containing higher volume fraction of Ti{sub 4}C{sub 2}S{sub 2} exhibited higher r value and stronger γ fiber texture with equal {1 1 1}〈1 1 2〉 and {1 1 1}〈1 1 0〉 components. By contrast, cold rolled and annealed sheets from hot strips containing lower volume fraction of Ti{sub 4}C{sub 2}S{sub 2} represented lower r values and weaker γ fiber texture with significant drops from {1 1 1}〈1 1 2〉 to {1 1 1}〈1 1 0〉 component.

  11. A study of oxidative stress induced by non-thermal plasma-activated water for bacterial damage

    International Nuclear Information System (INIS)

    Ar/O2 (2%) cold plasma microjet was used to create plasma-activated water (PAW). The disinfection efficacy of PAW against Staphylococcus aureus showed that PAW can effectively disinfect bacteria. Optical emission spectra and oxidation reduction potential results demonstrated the inactivation is attributed to oxidative stress induced by reactive oxygen species in PAW. Moreover, the results of X-ray photoelectron spectroscopy, atomic absorption spectrometry, and transmission electron microscopy suggested that the chemical state of cell surface, the integrity of cell membrane, as well as the cell internal components and structure were damaged by the oxidative stress.

  12. Bacterial Adhesion & Blocking Bacterial Adhesion

    DEFF Research Database (Denmark)

    Vejborg, Rebecca Munk

    2008-01-01

    parameters, which influence the transition from a planktonic lifestyle to a sessile lifestyle, have been studied. Protein conditioning film formation was found to influence bacterial adhesion and subsequent biofilm formation considerable, and an aqueous extract of fish muscle tissue was shown to...... tract to the microbial flocs in waste water treatment facilities. Microbial biofilms may however also cause a wide range of industrial and medical problems, and have been implicated in a wide range of persistent infectious diseases, including implantassociated microbial infections. Bacterial adhesion is...... the first committing step in biofilm formation, and has therefore been intensely scrutinized. Much however, still remains elusive. Bacterial adhesion is a highly complex process, which is influenced by a variety of factors. In this thesis, a range of physico-chemical, molecular and environmental...

  13. Bacterial lipases

    NARCIS (Netherlands)

    Jaeger, Karl-Erich; Ransac, Stéphane; Dijkstra, Bauke W.; Colson, Charles; Heuvel, Margreet van; Misset, Onno

    1994-01-01

    Many different bacterial species produce lipases which hydrolyze esters of glycerol with preferably long-chain fatty acids. They act at the interface generated by a hydrophobic lipid substrate in a hydrophilic aqueous medium. A characteristic property of lipases is called interfacial activation, mea

  14. Bacterial Ecology

    DEFF Research Database (Denmark)

    Fenchel, Tom

    2011-01-01

    Bacterial ecology is concerned with the interactions between bacteria and their biological and nonbiological environments and with the role of bacteria in biogeochemical element cycling. Many fundamental properties of bacteria are consequences of their small size. Thus, they can efficiently exploit...

  15. Modelled Precipitation Over Greenland

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set includes the annual total precipitation from 1985 to 1999 and monthly total precipitation from January 1985 to December 1999. The data is derived from...

  16. Action of Polymyxin B on Bacterial Membranes: Phosphatidylglycerol- and Cardiolipin-Induced Susceptibility to Polymyxin B in Acholeplasma laidlawii B

    Science.gov (United States)

    Teuber, Michael; Bader, Johann

    1976-01-01

    To identify the polymyxin receptor molecules in the membranes of living microorganisms, fusion of intact Acholeplasma laidlawii B with lipid vesicles was investigated according to the procedure of Grant and McConnell (1973). The naturally polymyxin-resistant A. laidlawii B was treated with phospholipid vesicles prepared from purified phospholipids of the polymyxin-susceptible Salmonella typhimurium G30. A. laidlawii B absorbed between 15 and 45% of its own lipid content of the added tritium-labeled phospholipids without loss of viability. Association with the acidic components phosphatidylglycerol and cardiolipin produced a 10- to 30-fold increase in polymyxin susceptibility, which was not obtained with egg-phosphatidylcholine and mixed phosphatidylcholine-phosphatidylethanolamine vesicles. The polymyxin-sensitized cells bound 12 times more radioactive antibiotic than resistant cells. The phosphatidylglycerol-induced susceptibility was abolished by serum fraction V (Cohn) proteins. PMID:176930

  17. Ultra-sonic observation in niobium hydride precipitation

    International Nuclear Information System (INIS)

    The hidrogen embrittlement of exothermic ocluders, had been considered as due to applied stress induced hydride precipitates leading to brittle fracture. The results of simultaneous measurements of macroscopic deformation and elastic change due to hydride precipitation, using the ultrasonic pulse-echo technique are showed. THen it was tested the possibility of kinectis precipitation parameters evoluation. (Author)

  18. Nucleotide-Induced Conformational Changes in Escherichia coli DnaA Protein Are Required for Bacterial ORC to Pre-RC Conversion at the Chromosomal Origin.

    Science.gov (United States)

    Saxena, Rahul; Vasudevan, Sona; Patil, Digvijay; Ashoura, Norah; Grimwade, Julia E; Crooke, Elliott

    2015-01-01

    DnaA oligomerizes when bound to origins of chromosomal replication. Structural analysis of a truncated form of DnaA from Aquifex aeolicus has provided insight into crucial conformational differences within the AAA+ domain that are specific to the ATP- versus ADP- bound form of DnaA. In this study molecular docking of ATP and ADP onto Escherichia coli DnaA, modeled on the crystal structure of Aquifex aeolicus DnaA, reveals changes in the orientation of amino acid residues within or near the vicinity of the nucleotide-binding pocket. Upon limited proteolysis with trypsin or chymotrypsin ADP-DnaA, but not ATP-DnaA generated relatively stable proteolytic fragments of various sizes. Examined sites of limited protease susceptibility that differ between ATP-DnaA and ADP-DnaA largely reside in the amino terminal half of DnaA. The concentration of adenine nucleotide needed to induce conformational changes, as detected by these protease susceptibilities of DnaA, coincides with the conversion of an inactive bacterial origin recognition complex (bORC) to a replication efficient pre-replication complex (pre-RC) at the E. coli chromosomal origin of replication (oriC). PMID:26610483

  19. Nucleotide-Induced Conformational Changes in Escherichia coli DnaA Protein Are Required for Bacterial ORC to Pre-RC Conversion at the Chromosomal Origin

    Directory of Open Access Journals (Sweden)

    Rahul Saxena

    2015-11-01

    Full Text Available DnaA oligomerizes when bound to origins of chromosomal replication. Structural analysis of a truncated form of DnaA from Aquifex aeolicus has provided insight into crucial conformational differences within the AAA+ domain that are specific to the ATP- versus ADP- bound form of DnaA. In this study molecular docking of ATP and ADP onto Escherichia coli DnaA, modeled on the crystal structure of Aquifex aeolicus DnaA, reveals changes in the orientation of amino acid residues within or near the vicinity of the nucleotide-binding pocket. Upon limited proteolysis with trypsin or chymotrypsin ADP-DnaA, but not ATP-DnaA generated relatively stable proteolytic fragments of various sizes. Examined sites of limited protease susceptibility that differ between ATP-DnaA and ADP-DnaA largely reside in the amino terminal half of DnaA. The concentration of adenine nucleotide needed to induce conformational changes, as detected by these protease susceptibilities of DnaA, coincides with the conversion of an inactive bacterial origin recognition complex (bORC to a replication efficient pre-replication complex (pre-RC at the E. coli chromosomal origin of replication (oriC.

  20. Salmonella typhi Ty21a bacterial ghost vector augments HIV-1 gp140 DNA vaccine-induced peripheral and mucosal antibody responses via TLR4 pathway.

    Science.gov (United States)

    Wen, Jing; Yang, Yi; Zhao, Guangyu; Tong, Shuang; Yu, Hong; Jin, Xia; Du, Lanying; Jiang, Shibo; Kou, Zhihua; Zhou, Yusen

    2012-08-24

    Because of their stability and ease of manipulation, DNA vaccines have considerable potential for eliciting immune responses. However, they are limited by their weak immunogenicity, especially in humans. To address this challenge, we explored a new strategy of HIV vaccine delivery using Salmonella typhi Ty21a bacterial ghosts (BGs). We found that Ty21a BGs loaded with an HIV gp140 DNA vaccine (Ty21a BG-DNA) were readily taken up by murine macrophage RAW264.7 cells, and gp140 was efficiently expressed in these cells. Peripheral and intestinal mucosal anti-gp120 antibody responses in mice vaccinated with BGs-DNA vaccine were significantly higher than those in mice immunized with naked DNA vaccine. The enhancement of antibody responses was associated with BG-induced production of IL-10 through TLR4 pathway. These results demonstrate that Ty21a BGs is a novel and effective delivery vehicle for DNA vaccines, which could therefore be used as a new strategy for development of HIV vaccines. PMID:22819719

  1. The peroxidase-mediated biodegradation of petroleum hydrocarbons in a H2O2-induced SBR using in-situ production of peroxidase: Biodegradation experiments and bacterial identification.

    Science.gov (United States)

    Shekoohiyan, Sakine; Moussavi, Gholamreza; Naddafi, Kazem

    2016-08-01

    A bacterial peroxidase-mediated oxidizing process was developed for biodegrading total petroleum hydrocarbons (TPH) in a sequencing batch reactor (SBR). Almost complete biodegradation (>99%) of high TPH concentrations (4g/L) was attained in the bioreactor with a low amount (0.6mM) of H2O2 at a reaction time of 22h. A specific TPH biodegradation rate as high as 44.3mgTPH/gbiomass×h was obtained with this process. The reaction times required for complete biodegradation of TPH concentrations of 1, 2, 3, and 4g/L were 21, 22, 28, and 30h, respectively. The catalytic activity of hydrocarbon catalyzing peroxidase was determined to be 1.48U/mL biomass. The biodegradation of TPH in seawater was similar to that in fresh media (no salt). A mixture of bacteria capable of peroxidase synthesis and hydrocarbon biodegradation including Pseudomonas spp. and Bacillus spp. were identified in the bioreactor. The GC/MS analysis of the effluent indicated that all classes of hydrocarbons could be well-degraded in the H2O2-induced SBR. Accordingly, the peroxidase-mediated process is a promising method for efficiently biodegrading concentrated TPH-laden saline wastewater. PMID:27060866

  2. Characterization of the Bacterial and Sulphate Reducing Community in the Alkaline and Constantly Cold Water of the Closed Kotalahti Mine

    Directory of Open Access Journals (Sweden)

    Malin Bomberg

    2015-07-01

    Full Text Available Drainage from metal-sulphide rich rocks may cause considerable environmental stress in the form of elevated sulphate and heavy metal contamination of the environment. Mine draining effects from closed mines may be abated using indigenous and introduced microbial communities for sulphate reduction and metal precipitation at the mining site. Here we characterized the general and sulphate reducing bacterial (SRB community of Kotalahti Mine (Finland. The mine was flooded after closure and sulphate reduction and metal precipitation was induced by addition of pig manure sludge into the Vehkankuilu shaft. Water was sampled from Vehkankuilu and Ollinkuilu shafts from depths −10, −30, −70 and −100 m 15 years after the treatment. The water in the shafts differed from each other biologically and geochemically. The shafts are not directly connected except by some fracture zones, and the Ollinkuilu shaft is used as a reference for environmental monitoring. The detected bacterial communities from both shafts contained methylotrophic γ-Proteobacteria, hydrogenotrophic and methylotrophic β-Proteobacteria and fermenting bacterial clades. The concentration of SRB was low, at most 4.0 × 103 dsrB genes·mL−1, and the SRB affiliated with Desulfobulbus and Thermoanaerobacteriales clades. Despite the obvious success of the mine as an in situ bioreactor for increasing water pH and removing sulphate and heavy metals by induced sulphate reduction under suboptimal temperature, only a small portion, less than 0.5%, of the bacterial population in the mine water was SRB.

  3. Gamma radiation induced oxidative stress and apoptosis inhibiting properties of bacterial secondary metabolite RK-IP-006.G in J774A.1 murine cell line

    International Nuclear Information System (INIS)

    Redox imbalance due to radiation induced oxidation of vital bio-macromolecules activates inflammatory response cascade leading to cell death. In present study, bacterial secondary metabolite, RK-IP-006.G, was evaluated for its oxidative stress and apoptosis inhibiting activities in irradiated J774A.1 murine macrophage cell line. Radiation induced intracellular ROS generation and its inhibition upon RK-IP-006.G pretreatment was estimated using 2',7'dichlorodihydroflurescein diacetate (DCFDA). Modulation in mitochondrial membrane potential (MMP) in irradiated cells and its protection by RK-IP-006.G pretreatment was evaluated using Rhodamine-123. Modulation in protein expression in irradiated and RK-IP-006.G treated J774A.1 cells was assessed by SDS-PAGE. Compensatory effect of RK-IP-006.G treatment on TNF-α expression in irradiated cells was estimated using ELISA assay. APO-BrDU assay was performed to evaluate radiation-induced apoptosis in irradiated cells. Radiation-induced cell damage and protective ability of RK-IP-006.G was also evaluated using Differential Interference Contrast Microscopy. Results of the study indicated significant (p< 0.05) decrease in DCFDA fluorescence in irradiated cells that were pretreated (∼2h) with RK-IP-006.G (0.25 μg/ml) as compared to irradiated cells. Similarly, significant (p<0.05) decrease in MMP was observed in irradiated cells pretreated with RK-IP-006.G (0.25 μg/ml) as compared to only irradiated cells at 1 h time point. SDS-PAGE analysis clearly demonstrated up-regulation of some prominent proteins in irradiated cells pretreated with RK-IP-006.G at 2-4h after treatment as compared to irradiated control. Significant (p<0.05) down regulation in TNF-α expression was observed in irradiated cells that pretreated with RK-IP-006.G compared to irradiated controls. APO-BrDU assay revealed significant reduction in apoptosis in irradiated cells pretreated with RK-IP-006.G when compared to irradiated control. The findings

  4. p-Cresyl sulfate suppresses lipopolysaccharide-induced anti-bacterial immune responses in murine macrophages in vitro.

    Science.gov (United States)

    Shiba, Takahiro; Makino, Ikuyo; Kawakami, Koji; Kato, Ikuo; Kobayashi, Toshihide; Kaneko, Kimiyuki

    2016-03-14

    p-Cresyl sulfate (pCS) is a known uremic toxin that is metabolized from p-cresol produced by intestinal bacteria. Abnormal accumulation of pCS in the blood is a characteristic of chronic kidney disease (CKD). pCS is suggested to cause immune dysfunction and increase the risk of infectious diseases in CKD patients. In this study, we focused on the effects of pCS on macrophage functions related to host defense. We evaluated the effects of pCS on cytokine production, nitric oxide (NO) production, arginase activity, expression of cell-surface molecules, and phagocytosis in the macrophage-like cell line, RAW264.7. pCS significantly decreased interleukin (IL)-12 p40 production and increased IL-10 production. pCS also decreased NO production, but did not influence arginase activity. pCS suppressed lipopolysaccharide-induced CD40 expression on the cell surface, but did not influence phagocytosis. We further assessed whether the effects of pCS observed in the macrophage-like cell line were consistent in primary macrophages. Similar to RAW264.7 cells, pCS decreased IL-12 p40 and p70 production and increased IL-10 production in primary peritoneal macrophages. These data indicate that pCS suppresses certain macrophage functions that contribute to host defense, and may play a role in CKD-related immune dysfunction. PMID:26784855

  5. Role of Contact Lens Wear, Bacterial Flora, and Mannose-Induced Pathogenic Protease in the Pathogenesis of Amoebic Keratitis

    Science.gov (United States)

    Alizadeh, Hassan; Neelam, Sudha; Hurt, Michael; Niederkorn, Jerry Y.

    2005-01-01

    The ocular surface is continuously exposed to potential pathogens, including free-living amoebae. Acanthamoeba species are among the most ubiquitous amoebae, yet Acanthamoeba keratitis is remarkably rare. The pathogenesis of Acanthamoeba keratitis is a complex, sequential process. Here we show that Acanthamoeba keratitis is profoundly affected by mannosylated proteins on the ocular surface, which stimulate the amoebae to elaborate a 133-kDa pathogenic protease. The mannose-induced protease (MIP133) mediates apoptosis of the corneal epithelium, facilitates corneal invasion, and degrades the corneal stroma. We show that contact lens wear upregulates mannosylated proteins on the corneal epithelium, stimulates MIP133 secretion, and exacerbates corneal disease. Corynebacterium xerosis, a constituent of the ocular flora, contains large amounts of mannose and is associated with Acanthamoeba keratitis. The present results show that amoebae exposed to C. xerosis produce increased amounts of MIP133 and more severe corneal disease. Oral immunization with MIP133 mitigates Acanthamoeba keratitis and demonstrates the feasibility of antidisease vaccines for pathogens that resist immune elimination. PMID:15664950

  6. Phage-mediated dispersal of biofilm and distribution of bacterial virulence genes is induced by quorum sensing.

    Directory of Open Access Journals (Sweden)

    Friederike S Rossmann

    2015-02-01

    Full Text Available The microbiome and the phage meta-genome within the human gut are influenced by antibiotic treatments. Identifying a novel mechanism, here we demonstrate that bacteria use the universal communication molecule AI-2 to induce virulence genes and transfer them via phage release. High concentrations (i.e. 100 μM of AI-2 promote dispersal of bacteria from already established biofilms, and is associated with release of phages capable of infecting other bacteria. Enterococcus faecalis V583ΔABC harbours 7 prophages in its genome, and a mutant deficient in one of these prophages (i.e. prophage 5 showed a greatly reduced dispersal of biofilm. Infection of a probiotic E. faecalis strain without lytic prophages with prophage 5 resulted in increased biofilm formation and also in biofilm dispersal upon induction with AI-2. Infection of the probiotic E. faecalis strain with phage-containing supernatants released through AI-2 from E. faecalis V583ΔABC resulted in a strong increase in pathogenicity of this strain. The polylysogenic probiotic strain was also more virulent in a mouse sepsis model and a rat endocarditis model. Both AI-2 and ciprofloxacin lead to phage release, indicating that conditions in the gastrointestinal tract of hospitalized patients treated with antibiotics might lead to distribution of virulence genes to apathogenic enterococci and possibly also to other commensals or even to beneficial probiotic strains.

  7. Responses of three very large inducible GTPases to bacterial and white spot syndrome virus challenges in the giant fresh water prawn Macrobrachium rosenbergii.

    Science.gov (United States)

    Huang, Ying; Jin, Min; Yin, Shaowu; Ding, Zhengfeng; Wang, Wen; Ren, Qian

    2016-04-01

    Interferons (IFNs) are cytokines secreted by cells in response to invasion by pathogens, such as viruses, bacteria, parasites, or tumor cells. Very large inducible GTPases (VLIG) are the latest IFN-inducible GTPase family to be discovered and are the largest known GTPases of any species. However, VLIG proteins from invertebrates have yet to be characterized. In this study, three forms of VLIGs designated as MrVLIG1, MrVLIG2, and MrVLIG3 were cloned from the giant fresh water prawn Macrobrachium rosenbergii. MrVLIG1 has a 5445 bp open reading frame (ORF) encoding an 1814-amino acid protein. The complete nucleotide sequence of MrVLIG2 cDNA is 7055 bp long consisting of a 5757 bp ORF encoding a protein with 1918 amino acids. The full length of the MrVLIG3 gene consists of 5511 bp with a 3909 bp ORF encoding a peptide with 1302 amino acids. BLASTP and phylogenetic tree analyses showed that the three MrVLIGs are clustered into one subgroup and, together with other vertebrate VLIGs, into a branch. Tissue distribution analysis indicated that the mRNAs of the three MrVLIGs were widely expressed in almost all detected tissues, including the hemocytes, heart, hepatopancreas, gills, stomach, and intestine, with the highest expression in the hepatopancreas. They were also detected in the intestine but with relatively low expression levels. Quantitative real-time RT-PCR analysis showed that the mRNA transcripts of the MrVLIGs in the hepatopancreas were significantly expressed at various time points after infection with Vibrio parahaemolyticus and white spot syndrome virus. In summary, the three isoforms of VLIG genes participate in the innate immune response of the shrimps to bacterial and viral infections. PMID:26850335

  8. Cloning of the Koi Herpesvirus Genome as an Infectious Bacterial Artificial Chromosome Demonstrates That Disruption of the Thymidine Kinase Locus Induces Partial Attenuation in Cyprinus carpio koi▿

    Science.gov (United States)

    Costes, B.; Fournier, G.; Michel, B.; Delforge, C.; Raj, V. Stalin; Dewals, B.; Gillet, L.; Drion, P.; Body, A.; Schynts, F.; Lieffrig, F.; Vanderplasschen, A.

    2008-01-01

    Koi herpesvirus (KHV) is the causative agent of a lethal disease in koi and common carp. In the present study, we describe the cloning of the KHV genome as a stable and infectious bacterial artificial chromosome (BAC) clone that can be used to produce KHV recombinant strains. This goal was achieved by the insertion of a loxP-flanked BAC cassette into the thymidine kinase (TK) locus. This insertion led to a BAC plasmid that was stably maintained in bacteria and was able to regenerate virions when permissive cells were transfected with the plasmid. Reconstituted virions free of the BAC cassette but carrying a disrupted TK locus (the FL BAC-excised strain) were produced by the transfection of Cre recombinase-expressing cells with the BAC. Similarly, virions with a wild-type revertant TK sequence (the FL BAC revertant strain) were produced by the cotransfection of cells with the BAC and a DNA fragment encoding the wild-type TK sequence. Reconstituted recombinant viruses were compared to the wild-type parental virus in vitro and in vivo. The FL BAC revertant strain and the FL BAC-excised strain replicated comparably to the parental FL strain. The FL BAC revertant strain induced KHV infection in koi carp that was indistinguishable from that induced by the parental strain, while the FL BAC-excised strain exhibited a partially attenuated phenotype. Finally, the usefulness of the KHV BAC for recombination studies was demonstrated by the production of an ORF16-deleted strain by using prokaryotic recombination technology. The availability of the KHV BAC is an important advance that will allow the study of viral genes involved in KHV pathogenesis, as well as the production of attenuated recombinant candidate vaccines. PMID:18337580

  9. Estradiol-mediated increases in the anorexia induced by intraperitoneal injection of bacterial lipopolysaccharide in female rats.

    Science.gov (United States)

    Geary, Nori; Asarian, Lori; Sheahan, James; Langhans, Wolfgang

    2004-09-15

    Lipopolysaccharide (LPS) derived from the cell walls of gram-negative bacteria causes a robust acute phase response (APR) that includes fever, anorexia, and many other elements. Because immune system function, including some models of illness anorexia, is sexually differentiated, we investigated the sexual differentiation of the anorexia induced by intraperitoneal LPS injections in rats. Cycling female Long-Evans rats tested either during diestrus or estrus ate less following 6.25 microg/kg LPS than did intact males. Following 12.5 microg/kg LPS, females in estrus ate less than either females during diestrus or males. Similarly, a more pronounced anorexia occurred following 12.5, 25, and 50 microg/kg LPS in ovariectomized females that received cyclic estradiol treatment and were tested on the day modeling estrus than in untreated ovariectomized rats. LPS also increased the length of the rats' ovarian cycles, usually by a day, especially when injected during diestrus. As in male rats, when LPS injections were repeated in the same rats, both estradiol-treated and untreated rats failed to display any significant anorexia. The inhibitory effects of LPS on eating in intact and ovariectomized rats were expressed solely as decreases in spontaneous meal frequency, without significant alteration of spontaneous meal size. These data indicate that anorexia following peripheral LPS administration is sexually differentiated and that estradiol is sufficient to produce this response. The mechanism of the pathophysiological effect of estradiol on meal frequency appears to be different from the physiological effect of estradiol on food intake because the latter is expressed solely as a change in meal size. PMID:15276786

  10. GRAIN-BOUNDARY PRECIPITATION UNDER IRRADIATION IN DILUTE BINARY ALLOYS

    Institute of Scientific and Technical Information of China (English)

    S.H. Song; Z.X. Yuan; J. Liu; R.G.Faulkner

    2003-01-01

    Irradiation-induced grain boundary segregation of solute atoms frequently bring about grain boundary precipitation of a second phase because of its making the solubility limit of the solute surpassed at grain boundaries. Until now the kinetic models for irradiation-induced grain boundary precipitation have been sparse. For this reason, we have theoretically treated grain boundary precipitation under irradiation in dilute binary alloys. Predictions ofγ'-Ni3Si precipitation at grain boundaries ave made for a dilute Ni-Si alloy subjected to irradiation. It is demonstrated that grain boundary silicon segregation under irradiation may lead to grain boundaryγ'-Ni3 Si precipitation over a certain temperature range.

  11. [Bacterial vaginosis].

    Science.gov (United States)

    Romero Herrero, Daniel; Andreu Domingo, Antonia

    2016-07-01

    Bacterial vaginosis (BV) is the main cause of vaginal dysbacteriosis in the women during the reproductive age. It is an entity in which many studies have focused for years and which is still open for discussion topics. This is due to the diversity of microorganisms that cause it and therefore, its difficult treatment. Bacterial vaginosis is probably the result of vaginal colonization by complex bacterial communities, many of them non-cultivable and with interdependent metabolism where anaerobic populations most likely play an important role in its pathogenesis. The main symptoms are an increase of vaginal discharge and the unpleasant smell of it. It can lead to serious consequences for women, such as an increased risk of contracting sexually transmitted infections including human immunodeficiency virus and upper genital tract and pregnancy complications. Gram stain is the gold standard for microbiological diagnosis of BV, but can also be diagnosed using the Amsel clinical criteria. It should not be considered a sexually transmitted disease but it is highly related to sex. Recurrence is the main problem of medical treatment. Apart from BV, there are other dysbacteriosis less characterized like aerobic vaginitis of which further studies are coming slowly but are achieving more attention and consensus among specialists. PMID:27474242

  12. Bacterial lipopolysaccharide augments febrile-range hyperthermia-induced heat shock protein 70 expression and extracellular release in human THP1 cells.

    Directory of Open Access Journals (Sweden)

    Mohan E Tulapurkar

    Full Text Available Sepsis, a devastating and often lethal complication of severe infection, is characterized by fever and dysregulated inflammation. While infections activate the inflammatory response in part through Toll-like receptors (TLRs, fever can partially activate the heat shock response with generation of heat shock proteins (HSPs. Since extracellular HSPs, especially HSP70 (eHSP70, are proinflammatory TLR agonists, we investigated how exposure to the TLR4 agonist, bacterial lipopolysaccharide (LPS and febrile range hyperthermia (FRH; 39.5°C modify HSP70 expression and extracellular release. Using differentiated THP1 cells, we found that concurrent exposure to FRH and LPS as well as TLR2 and TLR3 agonists synergized to activate expression of inducible HSP72 (HSPA1A mRNA and protein via a p38 MAP kinase-requiring mechanism. Treatment with LPS for 6 h stimulated eHSP70 release; levels of eHSP70 released at 39.5°C were higher than at 37°C roughly paralleling the increase in intracellular HSP72 in the 39.5°C cells. By contrast, 6 h exposure to FRH in the absence of LPS failed to promote eHSP70 release. Release of eHSP70 by LPS-treated THP1 cells was inhibited by glibenclamide, but not brefeldin, indicating that eHSP70 secretion occurred via a non-classical protein secretory mechanism. Analysis of eHSP70 levels in exosomes and exosome-depleted culture supernatants from LPS-treated THP1 cells using ELISA demonstrated similar eHSP70 levels in unfractionated and exosome-depleted culture supernatants, indicating that LPS-stimulated eHSP70 release did not occur via the exosome pathway. Immunoblot analysis of the exosome fraction of culture supernatants from these cells showed constitutive HSC70 (HSPA8 to be the predominant HSP70 family member present in exosomes. In summary, we have shown that LPS stimulates macrophages to secrete inducible HSP72 via a non-classical non-exosomal pathway while synergizing with FRH exposure to increase both intracellular and

  13. Study of asphaltene precipitation by Calorimetry

    DEFF Research Database (Denmark)

    Verdier, Sylvain Charles Roland; Plantier, Frédéric; Bessières, David; Andersen, Simon Ivar; Stenby, Erling Halfdan; Carrier, Hervé

    2007-01-01

    Can calorimetry bring new input to the Current understanding of asphaltene precipitation? In this work, two types of precipitation were studied by means of calorimetry: addition of n-heptane into asphaltene solutions and temperature/pressure variations on a recombined live oil. The first series of...... experiments showed that weak forces determine precipitation. Indeed, isothermal titration calorimetry could not detect any clear signal although this technique can detect low-energy transitions such as liquid-liquid equilibrium and rnicellization. The second series of tests proved that precipitation caused by...... T and P variations is exothermic for this system. Furthermore, the temperature-induced precipitation is accompanied by an increase in the apparent thermal expansivity. Therefore, it seems that these two phase transitions exhibit different calorimetric behaviours and they may not be as similar as...

  14. Metallization of bacterial cellulose for electrical and electronic device manufacture

    Energy Technology Data Exchange (ETDEWEB)

    Evans, Barbara R [Oak Ridge, TN; O' Neill, Hugh M [Knoxville, TN; Jansen, Valerie Malyvanh [Memphis, TN; Woodward, Jonathan [Knoxville, TN

    2010-09-28

    A method for the deposition of metals in bacterial cellulose and for the employment of the metallized bacterial cellulose in the construction of fuel cells and other electronic devices is disclosed. The method for impregnating bacterial cellulose with a metal comprises placing a bacterial cellulose matrix in a solution of a metal salt such that the metal salt is reduced to metallic form and the metal precipitates in or on the matrix. The method for the construction of a fuel cell comprises placing a hydrated bacterial cellulose support structure in a solution of a metal salt such that the metal precipitates in or on the support structure, inserting contact wires into two pieces of the metal impregnated support structure, placing the two pieces of metal impregnated support structure on opposite sides of a layer of hydrated bacterial cellulose, and dehydrating the three layer structure to create a fuel cell.

  15. Metallization of bacterial cellulose for electrical and electronic device manufacture

    Energy Technology Data Exchange (ETDEWEB)

    Evans, Barbara R. (Oak Ridge, TN); O' Neill, Hugh M. (Knoxville, TN); Jansen, Valerie Malyvanh (Memphis, TN); Woodward, Jonathan (Knoxville, TN)

    2011-06-07

    A method for the deposition of metals in bacterial cellulose and for the employment of the metallized bacterial cellulose in the construction of fuel cells and other electronic devices is disclosed. The method for impregnating bacterial cellulose with a metal comprises placing a bacterial cellulose matrix in a solution of a metal salt such that the metal salt is reduced to metallic form and the metal precipitates in or on the matrix. The method for the construction of a fuel cell comprises placing a hydrated bacterial cellulose support structure in a solution of a metal salt such that the metal precipitates in or on the support structure, inserting contact wires into two pieces of the metal impregnated support structure, placing the two pieces of metal impregnated support structure on opposite sides of a layer of hydrated bacterial cellulose, and dehydrating the three layer structure to create a fuel cell.

  16. Solid-Phase Products of Bacterial Oxidation of Arsenical Pyrite

    OpenAIRE

    Carlson, Liisa; Lindström, E. Börje; Hallberg, Kevin B.; Tuovinen, Olli H.

    1992-01-01

    Bacterial leaching of an As-containing pyrite concentrate produced acidic (pH < 1) leachates. During the leaching, the bacteria solubilized both As and Fe, and these two elements were distributed in solution-phase and solid-phase products. Jarosite and scorodite were the exclusive crystalline products in precipitate samples from the bacterial leaching of the sulfide concentrate.

  17. The co-evolution of Fe-,Ti-oxides and other microbially induced mineral precipitates in sandy sediments: understanding the role of microbes in diagenesis

    Science.gov (United States)

    Bower, D. M.; Hummer, D. R.; Kyono, A.; Steele, A.; Armstrong, J. T.

    2011-12-01

    Ilmenite and related Fe-,Ti-oxides are ubiquitous components of modern beach sands and are often associated with "fossil" microstructures in ancient sedimentary rocks. The mineral composition in ancient sedimentary rocks we see today, however, differs from what was originally formed in the sediments billions of years ago. This change in composition is usually attributed to long, complicated histories and atmospheric influences, while the contribution of microbes is not typically considered. Furthermore, the complex microbe-mineral relationships under different chemical and geologic conditions are still not well constrained. Here the goal is to understand the co-evolutionary path of microbes and minerals in sandy non-hydrothermal environments under early diagenetic conditions. Laboratory experiments were done to document the precipitation of minerals on cyanobacterial cells and extra polymeric substances as well as the phase changes in natural ilmenites (FeTiO3) to determine if microbes passively influence mineral phase pathways. The precipitates, ilmenite grains, and fossilized cells were analyzed using high-resolution imaging and geochemical techniques: scanning electron microscopy (SEM), X-ray diffraction (XRD), and micro Raman spectroscopy. The results of this study show that microbial fossilization and mineral phase changes occur under early diagenetic conditions (Tlife in sedimentary rocks on Earth, as well as for future planetary life exploration missions.

  18. Thermally induced crystallization and phase evolution in powders derived from amorphous calcium phosphate precipitates with a Ca/P ratio of 1:1

    Science.gov (United States)

    Zyman, Zoltan; Epple, Matthias; Goncharenko, Anton; Rokhmistrov, Dmytro; Prymak, Oleg; Loza, Kateryna

    2016-09-01

    Calcium phosphate powders of calcium pyrophosphate α1-CPP (the metastable phase of the high-temperature polymorph α-CPP) and the polymorph β-CPP (stable in this range), of α1-CPP, β-CPP, α1-TCP (metastable polymorph of the high-temperature phase α-tricalcium phosphate) and β-tricalcium phosphate β-TCP were prepared by heating amorphous calcium phosphate (ACP) precipitates with the nominal Ca/P ratio of 1:1 by nitrate synthesis. α1-CPP/β-CPP resulted from a crystallization at 530-640 °C and subsequent heating to 980 °C of unwashed and lyophilized ACP. α1-CPP/β-CPP/α1-TCP/β-TCP was formed by crystallization at 620-720 °C, followed by heating of six-time washed and lyophilized ACP precipitates from an ultra-short synthesis. The activation energy for the crystallization of ACP to α1-CPP was determined with 165 kJ mol-1. The reason for the occurrence of the TCP phases (Ca/P ratio=1.5) from ACP (Ca/P ratio=1) is discussed. The powders are prospective biomaterials for bone substitution because they combine effective bioactive phases with the metastable polymorphs α1-CPP and α1-TCP.

  19. Complete genome sequence of the Sporosarcina psychrophila DSM 6497, a psychrophilic Bacillus strain that mediates the calcium carbonate precipitation.

    Science.gov (United States)

    Yan, Wenkai; Xiao, Xiang; Zhang, Yu

    2016-05-20

    Sporosarcina psychrophila DSM 6497 is a gram positive, spore-formation psychrophilic bacterial strain, widely distributed in terrestrial and aquatic environments. Here we report its complete sequence including one circular chromosome of 4674191bp with a GC content of 40.3%. Genes encoding urease are predicted in the genome, which provide insight information on the microbiologically mediated urea hydrolysis process. This urea hydrolysis can further lead to an increase of carbonate anion and alkalinity in the environment, which promotes the microbiologically induced carbonate precipitation with various applications, such as the bioremediation of calcium rich wastewater and bio-reservation of architectural patrimony. PMID:27015981

  20. Investigation of Asphaltene Precipitation at Elevated Temperature

    DEFF Research Database (Denmark)

    Andersen, Simon Ivar; Lindeloff, Niels; Stenby, Erling Halfdan

    1998-01-01

    In order to obtain quantitative data on the asphaltene precipitation induced by the addition of n-alkane (heptane) at temperatures above the normal boiling point of the precipitant, a high temperature/high pressure filtration apparatus has been constructed. Oil and alkane are mixed at the...... the extracted fraction, hence there is no room for stirring. The equipment as well as solutions to some of the problems are presented along with precipitation data from 40 to 200 degrees C. The asphaltenes separated are analyzed using FT-ir. The filtrate containing the maltenes was cooled to room...

  1. Anti-Pseudomonas aeruginosa IgY Antibodies Induce Specific Bacterial Aggregation and Internalization in Human Polymorphonuclear Neutrophils

    DEFF Research Database (Denmark)

    Thomsen, K.; Christophersen, L.; Bjarnsholt, T.;

    2015-01-01

    P. aeruginosa by augmenting the phagocytic competence of PMNs may postpone the deteriorating chronic biofilm infection. Anti-P. aeruginosa IgY antibodies significantly increase the PMN-mediated respiratory burst and subsequent bacterial killing of P. aeruginosa in vitro. The mode of action is...... attributed to IgY-facilitated formation of immobilized bacteria in aggregates, as visualized by fluorescence microscopy andthe induction of increased bacterial hydrophobicity. Thus, the present study demonstrates that avian egg yolk immunoglobulins (IgY) targeting P. aeruginosa modify bacterial fitness...

  2. Bacterial flora of sturgeon fingerling

    International Nuclear Information System (INIS)

    The study on microbial populations is a suitable tool to understand and apply control methods to improve the sanitary level of production in fish breeding and rearing centers, ensure health of sturgeon fingerlings at the time of their release into the rivers and also in the conversation and restoration of these valuable stocks in the Caspian Sea, Iran. A laboratory research based on Austin methods (Austin, B., Austin, D.A. 1993) was conducted for bacterial study on 3 sturgeon species naming A. persicus, A. stellatus and A. nudiventris during different growth stages. Bacterial flora of Acinetobacter, Moraxella, Aeromonas, Vibrio, Edwardsiella, Staphylococcus, Proteus, Yersinia, Pseudomonas and Plesiomonas were determined. The factors which may induce changes in bacterial populations during different stages of fife are the followings: quality of water in rearing ponds, different conditions for growth stages, suitable time for colonization of bacterial flora in rearing pond, water temperature increase in fingerlings size and feeding condition. (author)

  3. Precipitation studies around Plant Bowen

    International Nuclear Information System (INIS)

    A program called METER (Meteorological Effects of Thermal Energy Releases) to investigate the atmospheric effects of the heat and moisture releases from large cooling towers and ponds, is reviewed. Results are reported from a precipitation modification study around the Plant Bowen (fossil-fuel power plant) in northwest Georgia which utilizes four natural-draft cooling towers. The study is composed of two parts: the statistical analysis of historic National Weather Service climatological data from the general area of the plant, and a field study involving, primarily, a high-density recording rain-gage network. Both parts are aimed toward obtaining quantitative estimates of potential plant-induced precipitation augmentation and storm pattern disruption

  4. Laser-induced reversion of $\\delta^{'}$ precipitates in an Al-Li alloy: Study on temperature rise in pulsed laser atom probe

    CERN Document Server

    Khushaim, Muna; Al-Kassab, Talaat

    2015-01-01

    The influence of tuning the laser energy during the analyses on the resulting microstructure in a specimen utilizing an ultra-fast laser assisted atom probe was demonstrated by a case study of a binary Al-Li alloy. The decomposition parameters, such as the size, number density, volume fraction and composition of $\\delta^{'}$ precipitates, were carefully monitored after each analysis. A simple model was employed to estimate the corresponding specimen temperature for each value of the laser energy. The results indicated that the corresponding temperatures for the laser energy in the range of 10 to 80 pJ are located inside the miscibility gap of the binary Al-Li phase diagram and fall into the metastable equilibrium field. In addition, the corresponding temperature for a laser energy of 100 pJ was in fairly good agreement with reported range of $\\delta^{'}$ solvus temperature, suggesting a result of reversion upon heating due to laser pulsing.

  5. Precipitation model in microalloyed steels both isothermal and continuous cooling conditions

    OpenAIRE

    Medina, Sebastián F.; Quispe, Alberto; Gómez, Manuel

    2015-01-01

    Niobium and vanadium precipitates (nitrides and carbides) can inhibit the static recrystallization of austenite but this does not happen for Ti, which form nitrides at high temperatures. RPTT diagrams show the interaction between recrystallization and precipitation allowing study the strain induced precipitation kinetics and precipitate coarsening. Based on Dutta and Sellars’s expression for the start of strain-induced precipitation in microalloyed steels, a new model has been constructed whi...

  6. A six-year study of sapling and large-tree growth and mortality responses to natural and induced variability in precipitation and throughfall.

    Science.gov (United States)

    Hanson, P J; Todd, D E; Amthor, J S

    2001-04-01

    Global climatic change may cause changes in regional precipitation that have important implications for forest growth in the southern United States. In 1993, a stand-level experiment was initiated on Walker Branch Watershed, Tennessee, to study the sensitivity of forest saplings and large trees to changes in soil water content. Soil water content was manipulated by gravity-driven transfer of precipitation throughfall from a dry treatment plot (-33%) to a wet treatment plot (+33%). A control plot was included. Each plot was 6400 m2. Measurements of stem diameter and observations of mortality were made on large trees and saplings of Acer rubrum L., Cornus florida L., Liriodendron tulipifera L., Nyssa sylvatica Marsh, Quercus alba L. and Quercus prinus L. every 2 weeks during six growing seasons. Saplings of C. florida and A. rubrum grew faster and mortality was less on the wet plot compared with the dry and control plots, through 6 years of soil water manipulation. Conversely, diameter growth of large trees was unaffected by the treatments. However, tree diameter growth averaged across treatments was affected by year-to- year changes in soil water status. Growth in wet years was as much as 2-3 times greater than in dry years. Relationships between tree growth, phenology and soil water potential were consistent among species and quantitative expressions were developed for application in models. These field growth data indicate that differences in seasonal patterns of rainfall within and between years have greater impacts on growth than percentage changes in rainfall applied to all rainfall events. PMID:11282574

  7. Increased Production of Lysozyme Associated with Bacterial Proliferation in Barrett's Esophagitis, Chronic Gastritis, Gluten-induced Atrophic Duodenitis (Celiac Disease), Lymphocytic Colitis, Collagenous Colitis, Ulcerative Colitis and Crohn's Colitis.

    Science.gov (United States)

    Rubio, Carlos A

    2015-12-01

    The mucosa of the esophagus, the stomach, the small intestine, the large intestine and rectum are unremittingly challenged by adverse micro-environmental factors, such as ingested pathogenic and non-pathogenic bacteria, and harsh secretions with digestive properties with disparate pH, as well as bacteria and secretions from upstream GI organs. Despite the apparently inauspicious mixture of secretions and bacteria, the normal GI mucosa retains a healthy state of cell renewal. To by-pass the tough microenvironment, the epithelia of the GI react by speeding-up cell exfoliation, by increasing peristalsis, eliminating bacteria through secretion of plasma cell-immunoglobulins and by increasing production of natural antibacterial enzymes (lysozyme) and host defense peptides (defensin-5). Lysozyme was recently found up-regulated in Barrett's esophagitis, in chronic gastritis, in gluten-induced atrophic duodenitis (celiac disease), in collagenous colitis, in lymphocytic colitis and in Crohn's colitis. This up-regulation is a response directed towards the special types of bacteria thriving in the microenvironment in each of the aforementioned clinical inflammatory maladies. The purpose of that up-regulation is to protect the mucosa affected by the ongoing chronic inflammation. Bacterial antibiotic resistance continues to exhaust our supply of effective antibiotics. The future challenge is how to solve the increasing menace of bacterial resistance to anti-bacterial drugs. Further research on natural anti-bacterial enzymes such as lysozyme, appears mandatory. PMID:26637845

  8. Comparative effects of dietary nucleoside-nucleotide mixture and its components on endotoxin induced bacterial translocation and small intestinal injury in protein deficient mice.

    OpenAIRE

    Adjei, A A; Yamauchi, K.; Chan, Y. C.; Konishi, M; Yamamoto, S.

    1996-01-01

    BACKGROUND--Nucleoside-nucleotide mixture has been shown to improve gut morphology and reduce the incidence of bacterial translocation in protein deficient mice. AIMS--To compare the reparative effect of nucleoside-nucleotide mixture and their individual components on maintenance of gut integrity and bacterial translocation based on their differential metabolism and utilisation. METHODS--ICR (CD-1) mice were randomised into eight groups of 10 animals each and fed 20% casein diet (control), pr...

  9. Hypoxia-inducible Factor-dependent Regulation of Platelet-activating Factor Receptor as a Route for Gram-Positive Bacterial Translocation across Epithelia

    OpenAIRE

    Keely, Simon; Glover, Louise E.; Weissmueller, Thomas; MacManus, Christopher F.; Fillon, Sophie; Fennimore, Blair; Colgan, Sean P.

    2010-01-01

    Mucosal surfaces, such as the lung and intestine, are lined by a monolayer of epithelia that provides tissue barrier and transport function. It is recently appreciated that a common feature of inflammatory processes within the mucosa is hypoxia (so-called inflammatory hypoxia). Given the strong association between bacterial translocation and mucosal inflammatory disease, we hypothesized that intestinal epithelial hypoxia influences bacterial translocation. Initial studies revealed that exposu...

  10. Precipitation and floodiness

    Science.gov (United States)

    Stephens, E.; Day, J. J.; Pappenberger, F.; Cloke, H.

    2015-12-01

    There are a number of factors that lead to nonlinearity between precipitation anomalies and flood hazard; this nonlinearity is a pertinent issue for applications that use a precipitation forecast as a proxy for imminent flood hazard. We assessed the degree of this nonlinearity for the first time using a recently developed global-scale hydrological model driven by the ERA-Interim/Land precipitation reanalysis (1980-2010). We introduced new indices to assess large-scale flood hazard, or floodiness, and quantified the link between monthly precipitation, river discharge, and floodiness anomalies at the global and regional scales. The results show that monthly floodiness is not well correlated with precipitation, therefore demonstrating the value of hydrometeorological systems for providing floodiness forecasts for decision-makers. A method is described for forecasting floodiness using the Global Flood Awareness System, building a climatology of regional floodiness from which to forecast floodiness anomalies out to 2 weeks.

  11. Bacterial hydrodynamics

    CERN Document Server

    Lauga, Eric

    2015-01-01

    Bacteria predate plants and animals by billions of years. Today, they are the world's smallest cells yet they represent the bulk of the world's biomass, and the main reservoir of nutrients for higher organisms. Most bacteria can move on their own, and the majority of motile bacteria are able to swim in viscous fluids using slender helical appendages called flagella. Low-Reynolds-number hydrodynamics is at the heart of the ability of flagella to generate propulsion at the micron scale. In fact, fluid dynamic forces impact many aspects of bacteriology, ranging from the ability of cells to reorient and search their surroundings to their interactions within mechanically and chemically-complex environments. Using hydrodynamics as an organizing framework, we review the biomechanics of bacterial motility and look ahead to future challenges.

  12. Final Technical Report for DOE Award DE-FG02-07ER64403 [Modeling of Microbially Induced Calcite Precipitation for the Immobilization of Strontium-90 Using a Variable Velocity Streamtube Ensemble

    Energy Technology Data Exchange (ETDEWEB)

    Ginn, Timothy R. [University of California, Davis; Weathers, Tess [University of California, Davis

    2013-08-26

    Biogeochemical modeling using PHREEQC2 and a streamtube ensemble approach is utilized to understand a well-to-well subsurface treatment system at the Vadose Zone Research Park (VZRP) near Idaho Falls, Idaho. Treatment involves in situ microbially-mediated ureolysis to induce calcite precipitation for the immobilization of strontium-90. PHREEQC2 is utilized to model the kinetically-controlled ureolysis and consequent calcite precipitation. Reaction kinetics, equilibrium phases, and cation exchange are used within PHREEQC2 to track pH and levels of calcium, ammonium, urea, and calcite precipitation over time, within a series of one-dimensional advective-dispersive transport paths creating a streamtube ensemble representation of the well-to-well transport. An understanding of the impact of physical heterogeneities within this radial flowfield is critical for remediation design; we address this via the streamtube approach: instead of depicting spatial extents of solutes in the subsurface we focus on their arrival distribution at the control well(s). Traditionally, each streamtube maintains uniform velocity; however in radial flow in homogeneous media, the velocity within any given streamtube is spatially-variable in a common way, being highest at the input and output wells and approaching a minimum at the midpoint between the wells. This idealized velocity variability is of significance in the case of ureolytically driven calcite precipitation. Streamtube velocity patterns for any particular configuration of injection and withdrawal wells are available as explicit calculations from potential theory, and also from particle tracking programs. To approximate the actual spatial distribution of velocity along streamtubes, we assume idealized radial non-uniform velocity associated with homogeneous media. This is implemented in PHREEQC2 via a non-uniform spatial discretization within each streamtube that honors both the streamtube’s travel time and the idealized

  13. The effect of Ti precipitates on hydrogen embrittlement of Fe–18Mn–0.6C–2Al–xTi twinning-induced plasticity steel

    International Nuclear Information System (INIS)

    Highlights: • Ti accelerated hydrogen embrittlement in Fe–18Mn–0.6C–2Al–xTi steels. • Hydrogen atoms transported to the interfaces of Ti particles during deformation. • Hydrogen-trapped TiN particles caused a ductile to brittle fracture transition. - Abstract: The effect of Ti precipitates on hydrogen embrittlement (HE) was investigated using Ti-free and Ti-bearing TWIP steels through slow tensile tests and thermal desorption analysis. Whereas Ti-free steel did not show the reduction in elongation by hydrogen charging, Ti-bearing steel revealed a great reduction in elongation, indicative of the low resistance to HE. During plastic deformation, hydrogen atoms migrated from grain boundaries and dislocations to twin boundaries for Ti-free steel and to the interfaces of Ti particles for Ti-bearing steel. The low resistance to HE of Ti-bearing steel was due to a ductile to brittle transition near hydrogen-trapped TiN particles

  14. Study of cross-linking reactions induced by gamma rays in hybrid membranes of Bisphenol-A-Polysulfone and precipitated silica

    International Nuclear Information System (INIS)

    In this work the bisphenol-A-polysulfone (PSF) was sulfonated using trimethyl silyl chlorosulfonate [(CH3)3SiSO3Cl] as a mild sulfonating agent in a homogeneous solution of dichloroethane. The sulfonation reaction was confirmed by acid-base titration and FTIR-spectroscopy analysis. The hybrid membranes were obtained by casting the sulfonated bisphenol-A-polysulfone (SPSF) and precipitated silica TixosilR 333 solutions in N-N-dimethylacetamide. Cross-linking in the hybrid membranes was obtained by irradiation, with doses ranging from 5 to 30 kGy using gamma ray from a 60Co source. The water uptake and the swelling of the membranes were estimated by measuring the change in weight between dry and wet conditions. The conductivity of the membranes in acid form was measured with the ac impedance technique using a PGSTAT30 frequency response analyzer. The hybrid cross-linked membranes have conductivity close to 10-1 S.cm-1 at 100% RH and 80 deg C. Electrochemical performances, thermo-mechanical stability and low cost make this cross-linked SPSF hybrid membrane an attractive material for fuel cells using a proton exchange membrane. (author)

  15. Precipitation Response to Regional Radiative Forcing

    Science.gov (United States)

    Shindell, D. T.; Voulgarakis, A.; Faluvegi, G.; Milly, G.

    2012-01-01

    Precipitation shifts can have large impacts on human society and ecosystems. Many aspects of how inhomogeneous radiative forcings influence precipitation remain unclear, however. Here we investigate regional precipitation responses to various forcings imposed in different latitude bands in a climate model. We find that several regions show strong, significant responses to most forcings, but that the magnitude and even the sign depends upon the forcing location and type. Aerosol and ozone forcings typically induce larger responses than equivalent carbon dioxide (CO2) forcing, and the influence of remote forcings often outweighs that of local forcings. Consistent with this, ozone and especially aerosols contribute greatly to precipitation changes over the Sahel and South and East Asia in historical simulations, and inclusion of aerosols greatly increases the agreement with observed trends in these areas, which cannot be attributed to either greenhouse gases or natural forcings. Estimates of precipitation responses derived from multiplying our Regional Precipitation Potentials (RPP; the response per unit forcing relationships) by historical forcings typically capture the actual response in full transient climate simulations fairly well, suggesting that these relationships may provide useful metrics. The strong sensitivity to aerosol and ozone forcing suggests that although some air quality improvements may unmask greenhouse gas-induced warming, they have large benefits for reducing regional disruption of the hydrologic cycle.

  16. Precipitation response to regional radiative forcing

    Directory of Open Access Journals (Sweden)

    D. T. Shindell

    2012-02-01

    Full Text Available Precipitation shifts can have large impacts on human society and ecosystems. Many aspects of how inhomogeneous radiative forcings influence precipitation remain unclear, however. Here we investigate regional precipitation responses to various forcings imposed in different latitude bands in a climate model. We find that several regions show strong, significant responses to most forcings, but the magnitude and even the sign depends upon the forcing location and type. Aerosol and ozone forcings typically induce larger responses than equivalent carbon dioxide (CO2 forcing, and the influence of remote forcings often outweighs that of local forcings. Consistent with this, ozone and especially aerosols contribute greatly to precipitation changes over the Sahel and South and East Asia in historical simulations, and inclusion of aerosols greatly increases the agreement with observed trends in these areas, which cannot be attributed to either greenhouse gases or natural forcings. Estimates of precipitation responses derived from multiplying our Regional Precipitation Potential (RPP; the response per unit forcing relationships by historical forcings typically capture the actual response in full transient climate simulations fairly well, suggesting that these relationships may provide useful metrics. The strong sensitivity to aerosol and ozone forcing suggests that although some air quality improvements may unmask greenhouse gas-induced changes in temperature, they have large benefits for reducing regional disruption of the hydrologic cycle.

  17. Precipitation response to regional radiative forcing

    Directory of Open Access Journals (Sweden)

    D. T. Shindell

    2012-08-01

    Full Text Available Precipitation shifts can have large impacts on human society and ecosystems. Many aspects of how inhomogeneous radiative forcings influence precipitation remain unclear, however. Here we investigate regional precipitation responses to various forcings imposed in different latitude bands in a climate model. We find that several regions show strong, significant responses to most forcings, but that the magnitude and even the sign depends upon the forcing location and type. Aerosol and ozone forcings typically induce larger responses than equivalent carbon dioxide (CO2 forcing, and the influence of remote forcings often outweighs that of local forcings. Consistent with this, ozone and especially aerosols contribute greatly to precipitation changes over the Sahel and South and East Asia in historical simulations, and inclusion of aerosols greatly increases the agreement with observed trends in these areas, which cannot be attributed to either greenhouse gases or natural forcings. Estimates of precipitation responses derived from multiplying our Regional Precipitation Potentials (RPP; the response per unit forcing relationships by historical forcings typically capture the actual response in full transient climate simulations fairly well, suggesting that these relationships may provide useful metrics. The strong sensitivity to aerosol and ozone forcing suggests that although some air quality improvements may unmask greenhouse gas-induced warming, they have large benefits for reducing regional disruption of the hydrologic cycle.

  18. Longevity in mice is promoted by probiotic-induced suppression of colonic senescence dependent on upregulation of gut bacterial polyamine production.

    Directory of Open Access Journals (Sweden)

    Mitsuharu Matsumoto

    Full Text Available BACKGROUND: Chronic low-grade inflammation is recognized as an important factor contributing to senescence and age-related diseases. In mammals, levels of polyamines (PAs decrease during the ageing process; PAs are known to decrease systemic inflammation by inhibiting inflammatory cytokine synthesis in macrophages. Reductions in intestinal luminal PAs levels have been associated with intestinal barrier dysfunction. The probiotic strain Bifidobacterium animalis subsp. lactis LKM512 is known to increase intestinal luminal PA concentrations. METHODOLOGY/PRINCIPAL FINDINGS: We supplemented the diet of 10-month-old Crj:CD-1 female mice with LKM512 for 11 months, while the controls received no supplementation. Survival rates were compared using Kaplan-Meier survival curves. LKM512-treated mice survived significantly longer than controls (P<0.001; moreover, skin ulcers and tumors were more common in the control mice. We then analyzed inflammatory and intestinal conditions by measuring several markers using HPLC, ELISA, reverse transcription-quantitative PCR, and histological slices. LKM512 mice showed altered 16S rRNA gene expression of several predominant intestinal bacterial groups. The fecal concentrations of PAs, but not of short-chain fatty acids, were significantly higher in LKM512-treated mice (P<0.05. Colonic mucosal function was also better in LKM512 mice, with increased mucus secretion and better maintenance of tight junctions. Changes in gene expression levels were evaluated using the NimbleGen mouse DNA microarray. LKM512 administration also downregulated the expression of ageing-associated and inflammation-associated genes and gene expression levels in 21-month-old LKM512-treated mice resembled those in 10-month-old untreated (younger mice. CONCLUSION/SIGNIFICANCE: Our study demonstrated increased longevity in mice following probiotic treatment with LKM512, possibly due to the suppression of chronic low-grade inflammation in the colon

  19. Bacterial and fungal taxon changes in soil microbial community composition induced by short-term biochar amendment in red oxidized loam soil.

    Science.gov (United States)

    Hu, Liao; Cao, Lixiang; Zhang, Renduo

    2014-03-01

    To take full advantage of biochar as a soil amendment, the objective of this study was to investigate the effects of biochar addition on soil bacterial and fungal diversity and community composition. Incubation experiments with a forest soil (a red oxidized loam soil) with and without biochar amendment were conducted for 96 days. The culture-independent molecular method was utilized to analyze soil bacterial and fungal species after the incubation experiments. Results showed that bacteria and fungi responded differently to the biochar addition during the short-term soil incubation. Twenty four and 18 bacterial genara were observed in the biochar amended and unamended soils, respectively, whereas 11 and 8 fungal genera were observed in the biochar amended and unamended soils, respectively. Microbial taxa analysis indicated that the biochar amendment resulted in significant shifts in both bacterial and fungal taxa during the incubation period. The shift for bacteria occurred at the genus and phylum levels, while for fungi only at the genus level. Specific taxa, such as Actinobacteria of bacteria and Trichoderma and Paecilomyces of fungi, were enriched in the biochar amended soil. The results reveal a pronounced impact of biochar on soil microbial community composition and an enrichment of key bacterial and fungal taxa in the soil during the short time period. PMID:24136343

  20. Soil n-alkane δD and Branched GDGTs Distributions Track Elevation-induced Precipitation and Temperature Changes along the South Central Andes (Argentina)

    Science.gov (United States)

    Nieto-Moreno, V.; Rohrmann, A.; van der Meer, M.; S Sinninghe Damsté, J.; Sachse, D.; Tofelde, S.; Niedermeyer, E. M.; Strecker, M. R.; Mulch, A.

    2015-12-01

    Orogenic surface uplift and topographic evolution of tectonically active mountain belts exert a strong impact on climatic teleconnections and Earth surface processes, including changes in global atmospheric circulation patterns, erosion rates, distribution of biomes, and precipitation patterns. Hence, quantifying the driving processes shaping the evolution of topography in ancient and active orogens is required in order to disentangle the dynamic interactions and feedbacks among surface uplift, climate, erosion and sedimentation. The south central Andes of Argentina provide a particularly suitable setting to study the interplay between the tectonic and climatic evolution of an actively subduction orogen over short and long time-scales. We present δD values of soil-derived n-alkane and brGDGTs distributions to assess their suitability for paleoelevation reconstructions in the southern central Andes. We collected soil samples from two different environmental and hydrological gradients, across the hillslope (26-28°S) and along a river-valley (22-24°S) of two individual mountain ranges. δD n-alkane and brGDGTs distributions are both linearly related with elevation and may be used for paleoaltimetry studies along the windward flanks of the south central Andes. δD n-alkane and brGDGT-derived temperature lapse rates broadly follow regional lapse rates along steep orographic fronts. The observed lapse rates are lower than the annual mean values of satellite-derived temperatures but approach those of temperature loggers along each transect. Instead, δD n-alkane lapse rates are in line with regional stream-water data. These linear relationships along the windward slopes break down when entering the internally drained part of the Puna plateau. Our data document that δD n-alkane and brGDGTs distributions can be used over time scales relevant for paleoclimate/-altimetry reconstructions but also stress that such reconstructions require knowledge of the depositional

  1. Chemisorption And Precipitation Reactions

    Science.gov (United States)

    The transport and bioavailability of chemical components within soils is, in part, controlled by partitioning between solids and solution. General terms used to describe these partitioning reactions include chemisorption and precipitation. Chemisorption is inclusive of the suit...

  2. Storage Gage Precipitation Observations

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A storage gage is a precipitation gage that requires reading and maintenance only monthly or seasonal intervals. This library includes reports from such gages,...

  3. WPA Precipitation Tabulations

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Hourly precipitation data tabulated under the Work Projects Administration (WPA), a New Deal program created to reduce unemployment during the Great Depression....

  4. Precipitation Estimates for Hydroelectricity

    Science.gov (United States)

    Tapiador, Francisco J.; Hou, Arthur Y.; de Castro, Manuel; Checa, Ramiro; Cuartero, Fernando; Barros, Ana P.

    2011-01-01

    Hydroelectric plants require precise and timely estimates of rain, snow and other hydrometeors for operations. However, it is far from being a trivial task to measure and predict precipitation. This paper presents the linkages between precipitation science and hydroelectricity, and in doing so it provides insight into current research directions that are relevant for this renewable energy. Methods described include radars, disdrometers, satellites and numerical models. Two recent advances that have the potential of being highly beneficial for hydropower operations are featured: the Global Precipitation Measuring (GPM) mission, which represents an important leap forward in precipitation observations from space, and high performance computing (HPC) and grid technology, that allows building ensembles of numerical weather and climate models.

  5. Hemispheric Assymeries in Auroral Precipitation

    Science.gov (United States)

    Mende, S. B.

    2014-12-01

    It is widely accepted that the space weather related electrodynamic forcing of the geospace environment acts through the high geomagnetic latitude regions. At high latitudes inter-hemispheric asymmetries are largely due to the differences in solar illumination, the direction of the solar wind and interplanetary magnetic field components and to a lesser extent, due to differences between the two hemispheric internal fields. So far most research regarding interhemispheric differences concentrated on learning about the basic magnetosphere-ionosphere coupling mechanisms. It has been well established that sunlit conditions affect the energy flux of auroral precipitation resulting from the reduction in the mean energy of the auroral electrons in the sunlit summer hemisphere. This can be explained by the partial shorting out of the particle accelerating fields by the sunlight induced conductivity. It has also been found that sunlit conditions reduce the particle fluxes and therefore the associated field aligned currents. Unless the precipitation-induced conductivities overwhelm the sunlit component of conductivity, this would imply that the magnetospheric current generator responds to the ionospheric load in a highly non-linear manner. Interhemispheric currents may also play an important role that has not been fully explored. Interhemispheric asymmetries in substorm morphology have been explored critically because conjugacy implies that substorms have a common source at equatorial latitudes. In some cases the lack of conjugacy of substorms could be explained by considering the magnitude and direction of the IMF.

  6. Fluoroquinolone-induced gene transfer in multidrug-resistant Salmonella

    Science.gov (United States)

    Fluoroquinolones are broad spectrum antibiotics that inhibit bacterial DNA gyrase and topoisomerase activity. Bacterial exposure to fluoroquinolones can cause DNA damage and induce a bacterial SOS response to stimulate repair of damaged DNA. Certain prophages (integrated in bacterial chromosomes) ...

  7. Bacterial fucose-rich polysaccharide stabilizes MAPK-mediated Nrf2/Keap1 signaling by directly scavenging reactive oxygen species during hydrogen peroxide-induced apoptosis of human lung fibroblast cells.

    Directory of Open Access Journals (Sweden)

    Sougata Roy Chowdhury

    Full Text Available Continuous free radical assault upsets cellular homeostasis and dysregulates associated signaling pathways to promote stress-induced cell death. In spite of the continuous development and implementation of effective therapeutic strategies, limitations in treatments for stress-induced toxicities remain. The purpose of the present study was to determine the potential therapeutic efficacy of bacterial fucose polysaccharides against hydrogen peroxide (H2O2-induced stress in human lung fibroblast (WI38 cells and to understand the associated molecular mechanisms. In two different fermentation processes, Bacillus megaterium RB-05 biosynthesized two non-identical fucose polysaccharides; of these, the polysaccharide having a high-fucose content (∼ 42% conferred the maximum free radical scavenging efficiency in vitro. Structural characterizations of the purified polysaccharides were performed using HPLC, GC-MS, and (1H/(13C/2D-COSY NMR. H2O2 (300 µM insult to WI38 cells showed anti-proliferative effects by inducing intracellular reactive oxygen species (ROS and by disrupting mitochondrial membrane permeability, followed by apoptosis. The polysaccharide (250 µg/mL attenuated the cell death process by directly scavenging intracellular ROS rather than activating endogenous antioxidant enzymes. This process encompasses inhibition of caspase-9/3/7, a decrease in the ratio of Bax/Bcl2, relocalization of translocated Bax and cytochrome c, upregulation of anti-apoptotic members of the Bcl2 family and a decrease in the phosphorylation of MAPKs (mitogen activated protein kinases. Furthermore, cellular homeostasis was re-established via stabilization of MAPK-mediated Nrf2/Keap1 signaling and transcription of downstream cytoprotective genes. This molecular study uniquely introduces a fucose-rich bacterial polysaccharide as a potential inhibitor of H2O2-induced stress and toxicities.

  8. Studies on the selectivity of DNA precipitation by spermine.

    OpenAIRE

    Hoopes, B C; McClure, W R

    1981-01-01

    We have examined the selectivity of the precipitation of DNA by spermine. We have found that the intra- and intermolecular condensation of DNA induced by spermine is highly selective even in the presence of added protein or triphosphates. We have also investigated the influence of buffer components on the threshold concentration of spermine required for DNA precipitation. Representative applications exploiting the selectivity of the precipitation reaction are also described.

  9. Enhancing the Effectiveness of Carbon Dioxide Flooding by Managing Asphaltene Precipitation

    Energy Technology Data Exchange (ETDEWEB)

    Deo, Milind D.

    2002-02-21

    Objectives of this project was to understand asphaltene precipitation in General and carbon dioxide induced precipitation in particular. To this effect, thermodynamic and kinetic experiments with the Rangely crude oil were conducted and thermodynamic and reservoir models were developed.

  10. From precipitation to stream

    OpenAIRE

    Peralta-Tapia, Andres

    2015-01-01

    Understanding the journey water makes from precipitation entering a catchment, traveling through soils, and the time it takes before it exits as stream water are questions of great relevance for both scientists and environmental managers. Natural stable isotopes such as δ¹⁸O and δ²H have been extensively used over the last decades to trace water through diverse catchments across the world. In this thesis I analyzed over 2500 isotope samples to create long-term time series of precipitation and...

  11. Induction and Function of IFNβ During Viral and Bacterial Infection

    OpenAIRE

    Nagarajan, Uma M.

    2011-01-01

    Since the discovery of the protein “interferon” over 50 years ago, IFNβ, an antiviral cytokine has been well studied. In particular the pathways inducing this cytokine during viral infection have been characterized, leading to the discovery of multitude of pattern recognition receptors. IFNβ is also induced during bacterial infection, following recognition of bacterial ligands by the host viral and DNA sensors. However, the function of IFNβ during bacterial infection is variable and -sometime...

  12. Global precipitation measurement (GPM)

    Science.gov (United States)

    Neeck, Steven P.; Flaming, Gilbert M.; Adams, W. James; Smith, Eric A.

    2001-12-01

    The National Aeronautics and Space Administration (NASA) is studying options for future space-based missions for the EOS Follow-on Era (post 2003), building upon the measurements made by Pre-EOS and EOS First Series Missions. One mission under consideration is the Global Precipitation Measurement (GPM), a cooperative venture of NASA, Japan, and other international partners. GPM will capitalize on the experience of the highly successful Tropical Rainfall Measurement Mission (TRMM). Its goal is to extend the measurement of rainfall to high latitudes with high temporal frequency, providing a global data set every three hours. A reference concept has been developed consisting of an improved TRMM-like primary satellite with precipitation radar and microwave radiometer to make detailed and accurate estimates of the precipitation structure and a constellation of small satellites flying compact microwave radiometers to provide the required temporal sampling of highly variable precipitation systems. Considering that DMSP spacecraft equipped with SSMIS microwave radiometers, successor NPOESS spacecraft equipped with CMIS microwave radiometers, and other relevant international systems are expected to be in operation during the timeframe of the reference concept, the total number of small satellites required to complete the constellation will be reduced. A nominal plan is to begin implementation in FY'03 with launches in 2007. NASA is presently engaged in advanced mission studies and advanced instrument technology development related to the mission.

  13. Precipitation Reconstruction (PREC)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The PREC data set is an analysis of monthly precipitation constructed on a 2.5(o)lat/lon grid over the global for the period from 1948 to the present. The land...

  14. Dynamics of bacterial gene regulation

    Science.gov (United States)

    Narang, Atul

    2009-03-01

    The phenomenon of diauxic growth is a classical problem of bacterial gene regulation. The most well studied example of this phenomenon is the glucose-lactose diauxie, which occurs because the expression of the lac operon is strongly repressed in the presence of glucose. This repression is often explained by appealing to molecular mechanisms such as cAMP activation and inducer exclusion. I will begin by analyzing data showing that these molecular mechanisms cannot explain the strong lac repression because they exert a relatively weak effect. I will then present a minimal model accounting only for enzyme induction and dilution, which yields strong repression despite the absence of catabolite repression and inducer exclusion. The model also explains the growth patterns observed in batch and continuous cultures of various bacterial strains and substrate mixtures. The talk will conclude with a discussion of the experimental evidence regarding positive feedback, the key component of the minimal model.

  15. A novel functional T cell hybridoma recognizes macrophage cell death induced by bacteria: a possible role for innate lymphocytes in bacterial infection.

    Science.gov (United States)

    Kubota, Koichi

    2006-06-15

    We have established a novel TCRalphabeta (TCRVbeta6)(+)CD4(-)CD8(-) T cell hybridoma designated B6HO3. When the B6HO3 cells were cocultured with bacterial-infected J774 macrophage-like cells, IFN-gamma production by B6HO3 cells was triggered through direct cell-cell contact with dying J774 cells infected with Listeria monocytogenes (LM), Shigella flexneri, or Salmonella typhimurium that expressed the type III secretion system, but not with intact J774 cells infected with heat-killed LM, nonhemolytic lysteriolysin O-deficient (Hly(-)) LM, plasmid-cured Shigella, or stationary-phase Salmonella. However, the triggering of B6HO3 cells for IFN-gamma production involved neither dying hepatoma cells infected with LM nor dying J774 cells caused by gliotoxin treatment or freeze thawing. Cycloheximide and Abs to H-2K(d), H-2D(d), Ia(d), CD1d, TCRVbeta6, and IL-12 did not inhibit the contact-dependent IFN-gamma response, indicating that this IFN-gamma response did not require de novo protein synthesis in bacterial-infected J774 cells and was TCR and IL-12 independent. Thus, in an as yet undefined way, B6HO3 hybridoma recognizes a specialized form of macrophage cell death resulting from bacterial infection and consequently produces IFN-gamma. Moreover, contact-dependent interaction of minor subsets of splenic alphabeta T cells, including NKT cells with dying LM-infected J774 and bone marrow-derived macrophage (BMM) cells, proved to provide an IFN-gamma-productive stimulus for these minor T cell populations, to which the parental T cell of the B6HO3 hybridoma appeared to belong. Unexpectedly, subsets of gammadelta T and NK cells similarly responded to dying LM-infected macrophage cells. These results propose that innate lymphocytes may possess a recognition system sensing macrophage cell "danger" resulting from bacterial infection. PMID:16751404

  16. Bacterial Nail Infection (Paronychia)

    Science.gov (United States)

    ... of nail infection is often caused by a bacterial infection but may also be caused by herpes, a ... to a type of yeast called Candida , or bacterial infection, and this may lead to abnormal nail growth. ...

  17. Prevention of bacterial adhesion

    DEFF Research Database (Denmark)

    Klemm, Per; Vejborg, Rebecca Munk; Hancock, Viktoria

    2010-01-01

    Management of bacterial infections is becoming increasingly difficult due to the emergence and increasing prevalence of bacterial pathogens that are resistant to available antibiotics. Conventional antibiotics generally kill bacteria by interfering with vital cellular functions, an approach that....... As such, adhesion represents the Achilles heel of crucial pathogenic functions. It follows that interference with adhesion can reduce bacterial virulence. Here, we illustrate this important topic with examples of techniques being developed that can inhibit bacterial adhesion. Some of these will...

  18. Cerebral embolism due to non-bacterial thrombotic endocarditis following pregnancy.

    OpenAIRE

    George, J.; Lamb, J T; Harriman, D G

    1984-01-01

    A case is reported of cerebral embolism with two very unusual features. Two bilaterally symmetrical haemorrhagic infarcts occurred, due to non-bacterial thrombotic cardiac valvular vegetations precipitated by the puerperium in a previously healthy young woman.

  19. DNA vaccines and bacterial DNA in immunity

    OpenAIRE

    Bandholtz, Lisa Charlotta

    2002-01-01

    This thesis describes DNA-based vaccination and the importance of bacterial DNA in different immunological perspectives. Intranasal (i.n.) DNA vaccination utilizing a plasmid encoding the chlamydial heat shock protein 60 (p-hsp-60) generated lower bacterial burden and reduced pathology in the lungs of mice after subsequent infection with C. pneumoniae. This DNA vaccine- induced protection was dependent on T cells and induction of IFN-gamma. Co-administration of a plasmid...

  20. Bacterial Probiotic Modulation of Dendritic Cells

    OpenAIRE

    Drakes, Maureen; Blanchard, Thomas; Czinn, Steven

    2004-01-01

    Intestinal dendritic cells are continually exposed to ingested microorganisms and high concentrations of endogenous bacterial flora. These cells can be activated by infectious agents and other stimuli to induce T-cell responses and to produce chemokines which recruit other cells to the local environment. Bacterial probiotics are of increasing use against intestinal disorders such as inflammatory bowel disease. They act as nonpathogenic stimuli within the gut to regain immunologic quiescence. ...

  1. ANALYTICAL CHARACTERIZATION OF PRECIPITATIONS

    Directory of Open Access Journals (Sweden)

    Danut Tiberiu Epure

    2011-02-01

    Full Text Available The properties of precipitation are mainly determined by solid, liquid and gaseous substances that exist in suspended or dissolved form. These substances come from many complex interactions between the atmosphere – hydrosphere – lithosphere – biota. The analytical characterization of precipitation has been based on the analysis of several chemical parameters: pH, conductivity, chloride, fluoride and ammonium ions, total hardness, alkalinity, H2S and sulphides, COD (Mn, nitrites, phosphorous, metallic ions (total iron, copper and chromium. In this purpose were collected rainwater, ice and snow from different areas (cities Năvodari, Constanţa, Buzău and Mihail Kogălniceanu during November 2007 till February 2008. This study shows that chemical characteristics of the analyzed water samples vary from one region to another depending on the mineralogical composition of zones crossed, the contact time, temperature, weather conditions, the sampling period (day or night and the nature of sample (rain, snow, ice.

  2. On the complex conductivity signatures of calcite precipitation

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Yuxin; Hubbard, Susan; Williams, Kenneth Hurst; Ajo-Franklin, Jonathan

    2009-11-01

    Calcite is a mineral phase that frequently precipitates during subsurface remediation or geotechnical engineering processes. This precipitation can lead to changes in the overall behavior of the system, such as flow alternation and soil strengthening. Because induced calcite precipitation is typically quite variable in space and time, monitoring its distribution in the subsurface is a challenge. In this research, we conducted a laboratory column experiment to investigate the potential of complex conductivity as a mean to remotely monitor calcite precipitation. Calcite precipitation was induced in a glass bead (3 mm) packed column through abiotic mixing of CaCl{sub 2} and Na{sub 2}CO{sub 3} solutions. The experiment continued for 12 days with a constant precipitation rate of {approx}0.6 milimole/d. Visual observations and scanning electron microscopy imaging revealed two distinct phases of precipitation: an earlier phase dominated by well distributed, discrete precipitates and a later phase characterized by localized precipitate aggregation and associated pore clogging. Complex conductivity measurements exhibited polarization signals that were characteristic of both phases of calcite precipitation, with the precipitation volume and crystal size controlling the overall polarization magnitude and relaxation time constant. We attribute the observed responses to polarization at the electrical double layer surrounding calcite crystals. Our experiment illustrates the potential of electrical methods for characterizing the distribution and aggregation state of nonconductive minerals like calcite. Advancing our ability to quantify geochemical transformations using such noninvasive methods is expected to facilitate our understanding of complex processes associated with natural subsurface systems as well as processes induced through engineered treatments (such as environmental remediation and carbon sequestration).

  3. Hourly Precipitation Data (HPD) Publication

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Hourly Precipitation Data (HPD) Publication is archived and available from the National Climatic Data Center (NCDC). This publication contains hourly precipitation...

  4. Interactive effects of belowground organic matter input, increased precipitation and clipping on soil carbon and nitrogen mineralization in a temperate steppe

    Directory of Open Access Journals (Sweden)

    L. N. Ma

    2013-06-01

    Full Text Available Soil organic matter (SOM inputs, increased precipitation and clipping (reducing belowground photosynthates allocation are predicted to affect soil C and N cycling in temperate grassland ecosystems. However, the interactive effects between SOM inputs (or increased precipitation and clipping on soil C and N mineralization in temperate steppes are still poorly understood. A field manipulation experiment was conducted to quantify the effects of SOM inputs, increased precipitation, clipping and their interactions on soil C and N mineralization in a temperate steppe of northeastern China from 2010 to 2011. The results showed that SOM inputs significantly increased soil C mineralization rate (CMR and net N mineralization rate (NMR. Increased precipitation-induced enhancement of soil CMR essentially ceased after the first year, stimulation of soil NMR and NNR continued into the second year. However, clipping only marginally decreased soil CMR and NMR during the two years. There were significant synergistic interactions between SOM inputs (or increased precipitation and clipping on soil CMR and NMR, as SOM inputs (or increased precipitation showed greater effects on soil CMR and NMR under clipped plots than under unclipped plots, which could be explained by the relative shifts in soil microbial community structure because of bacterial biomass increases, and by the relative decreases in arbuscular mycorrhizal fungi biomass due to the reduction of belowground photosynthates allocation. These results highlight the importance of plants in mediating the responses of soil C and N mineralization to potentially increased SOM and precipitation by controlling belowground photosynthates allocation in the temperate steppe. Thus, the findings have important implications for improving prediction of C and N sequestration potential and its feedbacks to climate change in temperate steppe ecosystems.

  5. Modeling solid-state precipitation

    CERN Document Server

    Nebylov, AlexanderKozeschnik, Ernst

    2012-01-01

    Over recent decades, modeling and simulation of solid-state precipitation has attracted increased attention in academia and industry due to their important contributions in designing properties of advanced structural materials and in increasing productivity and decreasing costs for expensive alloying. In particular, precipitation of second phases is an important means for controlling the mechanical-technological properties of structural materials. However, profound physical modeling of precipitation is not a trivial task. This book introduces you to the classical methods of precipitation model

  6. Group A rotavirus and bacterial agents associated with diarrhoea-induced hospitalisations in children below 5 years of age in Jammu

    Directory of Open Access Journals (Sweden)

    S Gazal

    2014-01-01

    Full Text Available Out of 210 faecal samples collected from children below 5 years attending different hospitals in Jammu and exhibiting clinical signs of diarrhoea, 41.9% samples were found positive for group A rotavirus by RNA-PAGE. Escherichia coli isolated in the study belonged to nine serogroups, out of which O69 was most frequent, being present in 12.38% samples. E. coli serogroups well recognised as enteropathogens viz. O69, O20 and O153 were present in 27.6% samples. Other bacterial pathogens associated with diarrhoea were present in 8.09% samples, out of which Shigella spp. was found in 4.76% samples followed by Salmonella spp. (2.38% and Pseudomonas spp. (0.95%.

  7. Precipitation Indices Low Countries

    Science.gov (United States)

    van Engelen, A. F. V.; Ynsen, F.; Buisman, J.; van der Schrier, G.

    2009-09-01

    Since 1995, KNMI published a series of books(1), presenting an annual reconstruction of weather and climate in the Low Countries, covering the period AD 763-present, or roughly, the last millennium. The reconstructions are based on the interpretation of documentary sources predominantly and comparison with other proxies and instrumental observations. The series also comprises a number of classifications. Amongst them annual classifications for winter and summer temperature and for winter and summer dryness-wetness. The classification of temperature have been reworked into peer reviewed (2) series (AD 1000-present) of seasonal temperatures and temperature indices, the so called LCT (Low Countries Temperature) series, now incorporated in the Millennium databases. Recently we started a study to convert the dryness-wetness classifications into a series of precipitation; the so called LCP (Low Countries Precipitation) series. A brief outline is given here of the applied methodology and preliminary results. The WMO definition for meteorological drought has been followed being that a period is called wet respectively dry when the amount of precipitation is considerable more respectively less than usual (normal). To gain a more quantitative insight for four locations, geographically spread over the Low Countries area (De Bilt, Vlissingen, Maastricht and Uccle), we analysed the statistics of daily precipitation series, covering the period 1900-present. This brought us to the following definition, valid for the Low Countries: A period is considered as (very) dry respectively (very) wet if over a continuous period of at least 60 days (~two months) cq 90 days (~three months) on at least two out of the four locations 50% less resp. 50% more than the normal amount for the location (based on the 1961-1990 normal period) has been measured. This results into the following classification into five drought classes hat could be applied to non instrumental observations: Very wet period

  8. DNA denatures upon drying after ethanol precipitation.

    OpenAIRE

    Svaren, J; Inagami, S; Lovegren, E; Chalkley, R

    1987-01-01

    We have observed that ethanol precipitation and subsequent drying of small (less than 400 bp) radiolabelled DNA fragments is able to induce a transition to a form that migrates aberrantly on acrylamide gels. This unusual form has increased sensitivity to S1 nuclease, decreased sensitivity to restriction enzymes, and a concentration dependence for the reversion to the duplex form. Apparently, DNA denatures upon dehydration so that redissolving at low dilution will allow the collapse of DNA fra...

  9. Energetic electron precipitation at the South Atlantic Magnetic Anomaly: a review

    International Nuclear Information System (INIS)

    The status of knowledge concerning energetic electron precipitation at the South Atlantic Magnetic Anomaly (SAMA) is presented. The main purpose is to place recent results in context with the long standing problems about energetic electron precipitation at the SAMA region. A synopsis of results achieved in the last two decades related to several physical mechanisms responsible for precipitating energetic electrons are also presented. The major uncertainties in the understanding of the energetic electron precipitation at the SAMA include: (1) temporal and spatial precipitation changes from magnetically quiet to disturbed periods; and (2) the role of wave induced precipitation process. (author)

  10. Antimutagenic effect of essential oil of sage (Salvia officinalis L. and its fractions against UV-induced mutations in bacterial and yeast cells

    Directory of Open Access Journals (Sweden)

    Knežević-Vukčević Jelena B.

    2005-01-01

    Full Text Available The inhibition of spontaneous and UV-induced mutations by essential oil (EO of sage (Salvia officinalis L. and its fractions F1-F5 containing different proportions of mono- and sesquiterpenes was studied with the Salmonella/microsome, E. coli K12, and S. cerevisiae D7 reversion assays. The EO, F1, and F2 exhibited antimutagenic potential against UV-induced mutations in all tests. Fractions F3 and F4 produced a toxic, mutagenic, or antimutagenic response, depend­ing on the test organism used. Reduction of spontaneous and UV-induced mutations by F5 was detected only in permeable strains of E. coli. The obtained results demonstrate antimutagenic activity of volatile sage terpenes and recommend them for further antimutagenesis and anticarcinogenesis studies.

  11. Vaccination with Brucella abortus Recombinant In Vivo-Induced Antigens Reduces Bacterial Load and Promotes Clearance in a Mouse Model for Infection

    OpenAIRE

    Jake E Lowry; Isaak, Dale D.; Leonhardt, Jack A.; Giulia Vernati; Jessie C Pate; Andrews, Gerard P.

    2011-01-01

    Current vaccines used for the prevention of brucellosis are ineffective in inducing protective immunity in animals that are chronically infected with Brucella abortus, such as elk. Using a gene discovery approach, in vivo-induced antigen technology (IVIAT) on B. abortus, we previously identified ten loci that encode products up-regulated during infection in elk and consequently may play a role in virulence. In our present study, five of the loci (D15, 0187, VirJ, Mdh, AfuA) were selected for ...

  12. Vimentin in Bacterial Infections

    DEFF Research Database (Denmark)

    Mak, Tim N; Brüggemann, Holger

    2016-01-01

    -vimentin interactions are presented in this review: the role of vimentin in pathogen-binding on the cell surface and subsequent bacterial invasion and the interaction of cytosolic vimentin and intracellular pathogens with regards to innate immune signaling. Mechanistic insight is presented involving distinct bacterial......Despite well-studied bacterial strategies to target actin to subvert the host cell cytoskeleton, thus promoting bacterial survival, replication, and dissemination, relatively little is known about the bacterial interaction with other components of the host cell cytoskeleton, including intermediate...... filaments (IFs). IFs have not only roles in maintaining the structural integrity of the cell, but they are also involved in many cellular processes including cell adhesion, immune signaling, and autophagy, processes that are important in the context of bacterial infections. Here, we summarize the knowledge...

  13. The Global Precipitation Climatology Project (GPCP) Combined Precipitation Dataset

    Science.gov (United States)

    Huffman, George J.; Adler, Robert F.; Arkin, Philip; Chang, Alfred; Ferraro, Ralph; Gruber, Arnold; Janowiak, John; McNab, Alan; Rudolf, Bruno; Schneider, Udo

    1997-01-01

    The Global Precipitation Climatology Project (GPCP) has released the GPCP Version 1 Combined Precipitation Data Set, a global, monthly precipitation dataset covering the period July 1987 through December 1995. The primary product in the dataset is a merged analysis incorporating precipitation estimates from low-orbit-satellite microwave data, geosynchronous-orbit -satellite infrared data, and rain gauge observations. The dataset also contains the individual input fields, a combination of the microwave and infrared satellite estimates, and error estimates for each field. The data are provided on 2.5 deg x 2.5 deg latitude-longitude global grids. Preliminary analyses show general agreement with prior studies of global precipitation and extends prior studies of El Nino-Southern Oscillation precipitation patterns. At the regional scale there are systematic differences with standard climatologies.

  14. ANALYSIS OF PROJECTED FREQUENCY AND INTENSITY CHANGES OF PRECIPITATION IN THE CARPATHIAN REGION

    OpenAIRE

    KIS ANNA; PONGRÁCZ RITA; BARTHOLY JUDIT

    2015-01-01

    Precipitation is the major atmospheric source of surface water, thus, in order to build appropriate adaptation strategies for various economic sections related to water resources it is essential to provide projections for precipitation tendencies as exact as possible. Extreme precipitation events are especially important from this point of view since they may result in different environmental, economical, and/or even human health damages. Excessive precipitation for instance may induce floods...

  15. Early Administration of Probiotics Alters Bacterial Colonization and Limits Diet-Induced Gut Dysfunction and Severity of Necrotizing Enterocolitis in Preterm Pigs

    DEFF Research Database (Denmark)

    Siggers, Richard H.; Siggers, Jayda; Boye, Mette;

    2008-01-01

    colonization, thereby reducing the susceptibility to formula-induced gut atrophy, dysfunction, and NEC. Caesarean-delivered preterm pigs were provided total parenteral nutrition (1.5 d) followed by enteral feeding (2d) with porcine colosstrum (COLOS; n= 5), formula (FORM; n = 9), or formula with probiotics...

  16. Arsenic Precipitation in the Bioleaching of Realgar Using Acidithiobacillus ferrooxidans

    Directory of Open Access Journals (Sweden)

    Peng Chen

    2013-01-01

    Full Text Available The current study investigates the characteristics of arsenic precipitation during the bioleaching of realgar. The bioleaching performance of Acidithiobacillus ferrooxidans BY-3 (A. ferrooxidans was investigated through scanning electron microscopy (SEM, transmission electron microscopy (TEM, X-ray diffraction (XRD, and Fourier transform infrared (FT-IR spectrophotometry. SEM and XRD analyses revealed that the arsenic-adapted strain of A. ferrooxidans was more hydrophobic and showed higher attachment efficiency to realgar compared with the wild strain. The arsenic precipitation using A. ferrooxidans resulted in the precipitation of an arsenic-rich compound on the surface of the bacterial cell, as shown in the TEM images. The FT-IR spectra suggested that the −OH and −NH groups were closely involved in the biosorption process. The observations above strongly suggest that the cell surface of A. ferrooxidans plays a role in the induction of arsenic tolerance during the bioleaching of realgar.

  17. Precipitation dendrites in turbulent pipe flows

    Science.gov (United States)

    Angheluta, Luiza; Hawkins, Christopher; Hammer, Øyvind; Jamtveit, Bjørn

    2013-04-01

    Surface precipitation in pipelines, as well as freezing in water pipes is of great concern in many industrial applications where scaling phenomena becomes a control problem of pipe-clogging or an efficiency reduction in transport. Flow blockage often occurs even when only a small fraction is deposited non-uniformly on the walls in the form of dendrites. Dendritic patterns are commonly encountered in surface precipitation from supersaturated solutions, e.g. calcite dendrites, as well as in solidification from undercooled liquids, e.g. freezing of water into ice dendrites. We explore the mathematical similarities between precipitation and freezing processes and, in particular, investigate the effect of fluid flow on the precipitation dendrites on pipe walls. We use a phase field approach to model surface growth coupled with a lattice Boltzmann method that simulates a channel flow at varying Reynolds number. The dendrites orientation and shape depend non-trivially on the ratio between advection and diffusion, i.e. the Peclet number, as well as the Reynolds number. Roughness induced vortices near growing dendrites at high flow rates further affect the branch splitting of dendrites. We show how the transport rate in a pipeline may depend on the different dendritic morphologies, and provide estimates for the flow conditions that correspond to most efficient transport regimes.

  18. Demonstrating Bacterial Flagella.

    Science.gov (United States)

    Porter, John R.; And Others

    1992-01-01

    Describes an effective laboratory method for demonstrating bacterial flagella that utilizes the Proteus mirabilis organism and a special harvesting technique. Includes safety considerations for the laboratory exercise. (MDH)

  19. Bacterial inhibition of silver-containing stainless steels

    Energy Technology Data Exchange (ETDEWEB)

    Chiang, W.C. [Technical Univ. of Denmark, Lyngby (Denmark). Dept. of Mechanical Engineering; Chang, S.M.; Lin, J.D.; Tseng, I.S.; Wu, J.K. [National Taiwan Ocean Univ., Taiwan (China). Inst. of Materials Engineering

    2010-07-01

    In this study, silver (Ag) was added to AlSl 316 austenitic 2205 duplex and 430 ferritic stainless steels as a means of inhibiting bacterial contamination. Three Ag-containing stainless steels were prepared using vacuum melting techniques. The influence of the Ag addition on corrosion resistance, bacterial inhibition, and mechanical properties was investigated. A study of the Ag-containing stainless steel microstructures demonstrated that Ag precipitates as small particles on the steel matrix surface. The precipitates act as anodes in the local action cell in the presence of bacteria. Ag dissolution mechanisms from the Ag precipitates on the Ag-containing stainless steels in the presence of Escherichia coli (E. coli) and Staphylococcus aureus (S. aureus) were also discussed. Results of the study suggested that Ag-containing stainless steels may be used in areas where hygiene is a significant concern.

  20. Bacterial translocation in cirrhotic rats. Its role in the development of spontaneous bacterial peritonitis.

    OpenAIRE

    Llovet, J M; Bartolí, R; Planas, R; Cabré, E; Jimenez, M.; Urban, A; Ojanguren, I; Arnal, J; Gassull, M. A.

    1994-01-01

    Bacterial translocation occurs in ascitic cirrhotic rats, but its association with ascites infection is unknown. The aim of this study was to assess the relation between bacterial translocation and ascites infection in cirrhotic rats. Male Sprague-Dawley rats were induced to cirrhosis with intragastric CCl4. Ascitic fluid, portal and peripheral blood, mesenteric lymph nodes, liver and spleen samples were cultured before death in those cirrhotic rats with less (group A) or more (group B) than ...

  1. Bacterial feeding induces changes in immune-related gene expression and has trans-generational impacts in the cabbage looper (Trichoplusia ni

    Directory of Open Access Journals (Sweden)

    Vogel Heiko

    2009-05-01

    Full Text Available Abstract Background Poly- and oligophagous insects are able to feed on various host plants with a wide range of defense strategies. However, diverse food plants are also inhabited by microbiota differing in quality and quantity, posing a potential challenge for immune system mediated homeostasis in the herbivore. Recent studies highlight the complex interactions between environmentally encountered microorganisms and herbivorous insects, pointing to a potential adaptational alteration of the insects' physiology. We performed a differential gene expression analysis in whole larvae and eggs laid by parents grown on different diets to identify potential novel genes related to elevated microbial content in the caterpillars' food. Results We used GeneFishing, a novel differential display method, to study the effects of dietary bacteria on the general gene expression in different life stages and tissues of the cabbage looper (Trichoplusia ni. We were able to visualize several hundred transcripts on agarose gels, one fifth of which were differentially expressed between treatments. The largest number of differentially expressed genes was found in defense-related processes (13 and in recognition and metabolism (16. 21 genes were picked out and further tested for differential gene expression by an independent method (qRT-PCR in various tissues of larvae grown on bacterial and bacteria-free diet, and also in adults. We detected a number of genes indicative of an altered physiological status of the insect, depending on the diet, developmental stage and tissue. Conclusion Changes in immune status are accompanied by specific changes in the transcript levels of genes connected to metabolism and homeostasis of the organism. Our findings show that larval feeding on bacteria-rich diet leads to substantial gene expression changes, potentially resulting in a reorganization of the insects' metabolism to maintain organismal homeostasis, not only in the larval but also

  2. Precipitation extremes under climate change

    CERN Document Server

    O'Gorman, Paul A

    2015-01-01

    The response of precipitation extremes to climate change is considered using results from theory, modeling, and observations, with a focus on the physical factors that control the response. Observations and simulations with climate models show that precipitation extremes intensify in response to a warming climate. However, the sensitivity of precipitation extremes to warming remains uncertain when convection is important, and it may be higher in the tropics than the extratropics. Several physical contributions govern the response of precipitation extremes. The thermodynamic contribution is robust and well understood, but theoretical understanding of the microphysical and dynamical contributions is still being developed. Orographic precipitation extremes and snowfall extremes respond differently from other precipitation extremes and require particular attention. Outstanding research challenges include the influence of mesoscale convective organization, the dependence on the duration considered, and the need to...

  3. Two Outer Membrane Lipoproteins from Histophilus somni Are Immunogenic in Rabbits and Sheep and Induce Protection against Bacterial Challenge in Mice

    OpenAIRE

    Guzmán-Brambila, Carolina; Rojas-Mayorquín, Argelia E.; Flores-Samaniego, Beatriz; Ortuño-Sahagún, Daniel

    2012-01-01

    Histophilus somni is an economically important pathogen of cattle and other ruminants and is considered one of the key components of the bovine respiratory disease (BRD) complex, the leading cause of economic loss in the livestock industry. BRD is a multifactorial syndrome, in which a triad of agents, including bacteria, viruses, and predisposing factors or “stressors,” combines to induce disease. Although vaccines against H. somni have been used for many decades, traditional bacterins have f...

  4. Verapamil, and Its Metabolite Norverapamil, Inhibit Macrophage-induced, Bacterial Efflux Pump-mediated Tolerance to Multiple Anti-tubercular Drugs

    OpenAIRE

    Adams, Kristin N.; Szumowski, John D.; Ramakrishnan, Lalita

    2014-01-01

    Drug tolerance likely represents an important barrier to tuberculosis treatment shortening. We previously implicated the Mycobacterium tuberculosis efflux pump Rv1258c as mediating macrophage-induced tolerance to rifampicin and intracellular growth. In this study, we infected the human macrophage-like cell line THP-1 with drug-sensitive and drug-resistant M. tuberculosis strains and found that tolerance developed to most antituberculosis drugs, including the newer agents moxifloxacin, PA-824,...

  5. Experimental modelling of Calcium carbonate precipitation in the presence of phototrophic anaerobic bacteria Rhodovulum sp.

    Science.gov (United States)

    Bundeleva, Irina; Shirokova, Liudmila; Benezeth, Pascale; Pokrovsky, Oleg; Kompantseva, Elena

    2010-05-01

    -potential of the cells. To characterise the link between the rate of bacterial growth (biomass production) and the rate of CaCO3 precipitation, batch kinetic experiments were performed. These experiments were carried out in closed (anaerobic) bottles with initial concentration of calcium from 1 to 20 mM and from 5 to 20 mM bicarbonate. The biomass of cells, pH, [Ca2+] and [Alk] were measured as a function of time. Blank experiments (without cell or autoclaved cells) were always carried out. We found that the optimal conditions for both CaCO3 precipitation and biomass increase for the culture Rhodovulum sp. A-20s, is calcium concentration of 3 mM, whatever the concentration of bicarbonate (5, 10, 15 mM). Note also that for calcium concentration higher than 3 mM, the biomass production decreases. In the case of strictly anaerobic Rhodovulum sp. S-1765 bacteria, the optimal conditions for calcium carbonate precipitation is observed for the bicarbonate concentration of 10 mM, whatever the calcium concentration (3, 5, 10 mM). Overall, the present study allows quantitative modeling of bacterially-induced CaCO3 precipitation. It helps to distinguish between the effect of cell surface functional groups, surface electrical charge, soluble organic matter and metabolic change of solution pH on the rate and nature of precipitating calcium carbonate solid phase.

  6. Using Satellite Precipitation to Improve Flood Modeling Applications of Global Reanalysis Precipitation Datasets

    Science.gov (United States)

    Seyyedi, Hojjat; Anagnostou, Emmanouil; Beighley, Edward; McCollum, Jeffrey

    2015-04-01

    Deriving flood vulnerability maps at basin scale typically requires simulating a long record of annual maximum discharges. To improve this approach, long precipitation records from global reanalysis systems must be downscaled to a spatio-temporal resolution applicable for flood modeling. This study evaluates a combined spatial downscaling and error correction technique based on high-resolution satellite precipitation products applied on NASA's Global Land Data Assimilation System (GLDAS) reanalysis precipitation dataset. The TRMM 3B42 25-km and 3-hourly blended satellite precipitation product is used for driving the GLDAS reanalysis downscaling. The study focuses on 437 flood-inducing storm events that occurred over a period of ten years (2002-2011) in the Susquehanna River basin located in the northeast United States. A validation strategy was devised for assessing error metrics in rainfall and simulated runoff as function of basin area, storm severity and season. The WSR-88D gauge-adjusted radar-rainfall (stage IV) product was used as the reference rainfall dataset, while runoff simulations forced with the stage IV precipitation dataset were considered as the runoff reference. Results show that the generated rainfall ensembles from the downscaled reanalysis products encapsulate the reference rainfall. Frequency analysis of rainfall and runoff and mean relative error and root mean square error statistics exhibited improvements in the precipitation and runoff simulation error statistics of the 3B42-driven downscaled GLDAS reanalysis dataset compared to the original reanalysis precipitation product. Results vary by season and less by basin scale. The proposed downscaling scheme is modular in design and can be applied on different satellite and reanalysis dataset over different regions.

  7. Altitude precipitation gradient in Serbia

    Directory of Open Access Journals (Sweden)

    Živković Nenad M.

    2004-01-01

    Full Text Available Using average annual precipitations data for period 1961-90. from all rain gauges in Serbia, southern of Sava and Danube rivers, the map of altitude precipitations gradient is constructed. 59 regions homogeneous for relation X=f(H are obtained by regression analysis method (two-dimensional type, X precipitation height and H - altitude. Some new method are applied, some limitations are shown, some regularities are found in disposition of precipitation growth and it is indicated on practical application of this method in physico-geographical research.

  8. Electrical operation of electrostatic precipitators

    CERN Document Server

    Parker, Ken

    2003-01-01

    The electrostatic precipitator remains on of the most cost effective means of controlling the emission of particulates from most industrial processes. This book will be of interest to both users and suppliers of electrostatic precipitators as well as advanced students on environmental based courses. The author identifies the physical and engineering basis for the development of electrical equipment for electrostatic precipitators and thoroughly explores the technological factors which optimize the efficiency of the precipitator and hence minimize emissions, as well as future developments in th

  9. Dielectric constant and ionic strength effects on DNA precipitation.

    OpenAIRE

    Flock, S; Labarbe, R; Houssier, C

    1996-01-01

    We have investigated the effect of different zwitterionic compounds on DNA precipitation induced by spermine4+. Glycine, beta-alanine, 4-aminobutyric acid, and 6-aminocaproic acid have shown an increasing capacity to attenuate DNA precipitation. This protection effect has been correlated with the dielectric constant increase of their corresponding solutions. Calculations based on these experimental data and counter-ion condensation theory have confirmed the importance of this parameter for DN...

  10. Shuffling bacterial metabolomes

    OpenAIRE

    Thomason, Brendan; Read, Timothy D.

    2006-01-01

    Horizontal gene transfer (HGT) has a far more significant role than gene duplication in bacterial evolution. This has recently been illustrated by work demonstrating the importance of HGT in the emergence of bacterial metabolic networks, with horizontally acquired genes being placed in peripheral pathways at the outer branches of the networks.

  11. Vimentin in Bacterial Infections.

    Science.gov (United States)

    Mak, Tim N; Brüggemann, Holger

    2016-01-01

    Despite well-studied bacterial strategies to target actin to subvert the host cell cytoskeleton, thus promoting bacterial survival, replication, and dissemination, relatively little is known about the bacterial interaction with other components of the host cell cytoskeleton, including intermediate filaments (IFs). IFs have not only roles in maintaining the structural integrity of the cell, but they are also involved in many cellular processes including cell adhesion, immune signaling, and autophagy, processes that are important in the context of bacterial infections. Here, we summarize the knowledge about the role of IFs in bacterial infections, focusing on the type III IF protein vimentin. Recent studies have revealed the involvement of vimentin in host cell defenses, acting as ligand for several pattern recognition receptors of the innate immune system. Two main aspects of bacteria-vimentin interactions are presented in this review: the role of vimentin in pathogen-binding on the cell surface and subsequent bacterial invasion and the interaction of cytosolic vimentin and intracellular pathogens with regards to innate immune signaling. Mechanistic insight is presented involving distinct bacterial virulence factors that target vimentin to subvert its function in order to change the host cell fate in the course of a bacterial infection. PMID:27096872

  12. Prevention of bacterial adhesion

    DEFF Research Database (Denmark)

    Klemm, Per; Vejborg, Rebecca Munk; Hancock, Viktoria

    2010-01-01

    Management of bacterial infections is becoming increasingly difficult due to the emergence and increasing prevalence of bacterial pathogens that are resistant to available antibiotics. Conventional antibiotics generally kill bacteria by interfering with vital cellular functions, an approach that ...... become valuable weapons for preventing pathogen contamination and fighting infectious diseases in the future....

  13. Vimentin in Bacterial Infections

    Directory of Open Access Journals (Sweden)

    Tim N. Mak

    2016-04-01

    Full Text Available Despite well-studied bacterial strategies to target actin to subvert the host cell cytoskeleton, thus promoting bacterial survival, replication, and dissemination, relatively little is known about the bacterial interaction with other components of the host cell cytoskeleton, including intermediate filaments (IFs. IFs have not only roles in maintaining the structural integrity of the cell, but they are also involved in many cellular processes including cell adhesion, immune signaling, and autophagy, processes that are important in the context of bacterial infections. Here, we summarize the knowledge about the role of IFs in bacterial infections, focusing on the type III IF protein vimentin. Recent studies have revealed the involvement of vimentin in host cell defenses, acting as ligand for several pattern recognition receptors of the innate immune system. Two main aspects of bacteria-vimentin interactions are presented in this review: the role of vimentin in pathogen-binding on the cell surface and subsequent bacterial invasion and the interaction of cytosolic vimentin and intracellular pathogens with regards to innate immune signaling. Mechanistic insight is presented involving distinct bacterial virulence factors that target vimentin to subvert its function in order to change the host cell fate in the course of a bacterial infection.

  14. Extended defects and precipitation in heavily B-doped silicon

    International Nuclear Information System (INIS)

    The boron precipitation phenomenon in highly supersaturated boron-implanted silicon (10 keV B+, 5 × 1015 ions/cm2) has been investigated by means of atom probe tomography, transmission electron microscopy and secondary ion mass spectrometry. We demonstrate that (001) dislocation loops observed by transmission electron microscopy in the region close to the boron projected range and boron precipitates ((001)-platelets) observed by atom probe are the same objects. For sufficiently high thermal budgets (900 °C for 5 h), boron precipitates close to the stoichiometric SiB3 composition have been observed, indicating that the precipitation induced by high-dose boron implantation can lead to the formation of a stable phase. - Highlights: ► Boron precipitation in Si has been analyzed using correlative techniques. ► Extended defects are observed along (100) Si planes after annealing at 900 °C. ► The (100) dislocation loops and the boron precipitates may be the same objects. ► Boron concentration within the precipitates increases with the thermal budgets. ► For high thermal budgets, the boron precipitates composition is close to the SiB3

  15. Identification of an intestine-specific promoter and inducible expression of bacterial α-galactosidase in mammalian cells by a lac operon system

    Directory of Open Access Journals (Sweden)

    Ya-Feng Zhai

    2012-10-01

    Full Text Available Abstract Background α-galactosidase has been widely used in animal husbandry to reduce anti-nutritional factors (such as α-galactoside in feed. Intestine-specific and substrate inducible expression of α-galactosidase would be highly beneficial for transgenic animal production. Methods To achieve the intestine-specific and substrate inducible expression of α-galactosidase, we first identified intestine-specific promoters by comparing the transcriptional activity and tissue specificity of four intestine-specific promoters from human intestinal fatty acid binding protein, rat intestinal fatty acid binding protein, human mucin-2 and human lysozyme. We made two chimeric constructs combining the promoter and enhancer of human mucin-2, rat intestinal trefoil factor and human sucrase-isomaltase. Then a modified lac operon system was constructed to investigate the induction of α-galactosidase expression and enzyme activity by isopropyl β-D-1-thiogalactopyranoside (IPTG and an α-galactosidase substrate, α-lactose. We declared that the research carried out on human (Zhai Yafeng was in compliance with the Helsinki Declaration, and experimental research on animals also followed internationally recognized guidelines. Results The activity of the human mucin-2 promoter was about 2 to 3 times higher than that of other intestine-specific promoters. In the lac operon system, the repressor significantly decreased (P P Conclusions We have successfully constructed a high specificity inducible lac operon system in an intestine-derived cell line, which could be of great value for gene therapy applications and transgenic animal production.

  16. Copper precipitates in silicon: Precipitation, dissolution and chemical state

    International Nuclear Information System (INIS)

    The precipitation and dissolution of copper impurities at oxygen precipitates and stacking faults in silicon were studied using thermal budgets commensurate with standard integrated circuit processing. Additionally, in order to develop a better understanding of the dissolution process, we have obtained results on the chemical state of the copper precipitates. The goal of this work was to determine the feasibility of removing and maintaining copper impurities away from the active device region of an integrated circuit device by use of oxygen precipitates and stacking faults in the bulk of the material. Based on our results, we provide a basis for a predictive understanding of copper precipitation and dissolution in silicon and we discuss the feasibility of copper impurity control in silicon integrated circuit devices

  17. Investigation of Strontium Incorporation into Biotically and Abiotically Precipitated-Calcium Calcite Using Secondary Ion Mass Spectrometry

    Science.gov (United States)

    Ingram, J.; Fujita, Y.

    2001-12-01

    Radionuclide and metal contaminants are present in the vadose zone and groundwater throughout the U.S. Department of Energy (DOE) complex. A possible approach to their remediation is in situ immobilization by co-precipitation of these elements in authigenic calcite and calcite overgrowths. Microorganisms are known to facilitate the precipitation of calicite; hence the stimulation of biogenic calcite production may offer a means to accelerate co-precipitation of contaminant metals. Strontium is well-known to substitute for Ca in calcium carbonate minerals, and consequently , the uranium fission product 90Sr is a prime candidate for this type of remediation approach. In order to predict the extent and stability of Sr incorporation into calcite precipitated under this bioremediation strategy, it is necessary to understand how much Sr is being incorporated. In these studies, secondary ion mass spectrometry (SIMS) was utilized to characterize the surface chemistry of carbonates generated by bacterial activity in synthetic groundwater containing Ca and Sr. SIMS with sputter depth profiling allows the determination of changes in Sr to Ca ratios with depth in particulate carbonate samples. The sputter depth profiling results can be compared with analysis of the bulk composition by inductively coupled plasma atomic emission spectroscopy (ICP-AES). Results of analyses on carbonates generated by B. pasteurii in synthetic groundwater with initial Ca and Sr concentrations of 80 ppm and 10 ppm, respectively, showed that SIMS could successfully measure ion ratios on the surface and within these particles. ICP-AES data indicated a bulk Sr:Ca ratio of 0.11, and sputtering SIMS data approached this value with increasing depth into the particle. The Sr:Ca ratio however, contrary to what would be expected from precipitation under batch conditions, was lower at the surface of the particles (ca. 0.05) and increased with depth. One possible reason for this phenomenon is re

  18. River flooding due to intense precipitation

    International Nuclear Information System (INIS)

    River stage can rise and cause site flooding due to local intense precipitation (LIP), dam failures, snow melt in conjunction with precipitation or dam failures, etc. As part of the re-evaluation of the design basis as well as the PRA analysis of other external events, the likelihood and consequence of river flooding leading to the site flooding need to be examined more rigorously. To evaluate the effects of intense precipitation on site structures, the site watershed hydrology and pond storage are calculated. To determine if river flooding can cause damage to risk-significant systems, structures, and components (SSC), water surface elevations are analyzed. Typically, the amount and rate of the input water is determined first. For intense precipitation, the fraction of the rainfall in the watershed drainage area not infiltrated into the ground is collected in the river and contributes to the rise of river water elevation. For design basis analysis, the Probable Maximum Flood (PMF) is evaluated using the Probable Maximum Precipitation (PMP) based on the site topography/configuration. The peak runoff flow rate and water surface elevations resulting from the precipitation induced flooding can then be estimated. The runoff flow hydrograph and peak discharge flows can be developed using the synthetic hydrograph method. The standard step method can then be used to determine the water surface elevations along the river channel. Thus, the flood water from the local intense precipitation storm and excess runoff from the nearby river can be evaluated to calculate the water surface elevations, which can be compared with the station grade floor elevation to determine the effects of site flooding on risk-significant SSCs. The analysis needs to consider any possible diversion flow and the effects of changes to the site configurations. Typically, the analysis is performed based on conservative peak rainfall intensity and the assumptions of failure of the site drainage facilities

  19. Improved ethanol precipitation of DNA.

    Science.gov (United States)

    Fregel, Rosa; González, Ana; Cabrera, Vicente M

    2010-04-01

    In this Short Communication, a shorter version of the standard DNA ethanol precipitation and purification protocol is described. It uses a mixture of 70% ethanol, 75 mM ammonium acetate and different concentrations of different carriers to perform DNA precipitation and washing in only one step. PMID:20336673

  20. Resistivity Problems in Electrostatic Precipitation

    Science.gov (United States)

    White, Harry J.

    1974-01-01

    The process of electrostatic precipitation has ever-increasing application in more efficient collection of fine particles from industrial air emissions. This article details a large number of new developments in the field. The emphasis is on high resistivity particles which are a common cause of poor precipitator performance. (LS)

  1. Precipitation in the Solar System

    Science.gov (United States)

    McIntosh, Gordon

    2007-01-01

    As an astronomy instructor, I am always looking for commonly observed Earthly experiences to help my students and me understand and appreciate similar occurrences elsewhere in the solar system. Recently I wrote a short TPT article on frost. This paper is on the related phenomena of precipitation. Precipitation, so common on most of the Earth's…

  2. Method of precipitating uranium peroxide

    International Nuclear Information System (INIS)

    The uranium dissolved as uranyl tricarbonate ion in an aqueous alkaline solution is precipitated out as uranium peroxide. The precipitation is carried out by acidifying a portion of the aqueous alkaline solution with excess sulfuric acid to convert the uranyl tricarbonate ion to the uranyl ion and carbon dioxide. This is followed by the addition of hydrogen peroxide to the acidified solution to convert the uranyl ion to uranium peroxide precipitate, producing additional acid. Concurrently, a different portion of the aqueous alkaline uranyl tricarbonate solution is added to the precipitating solution to elevate the pH to an acidic range which is optimum for effective reaction to uranium peroxide and for its precipitation

  3. Bacterial mutagenicity assays: test methods.

    Science.gov (United States)

    Gatehouse, David

    2012-01-01

    The most widely used assays for detecting chemically induced gene mutations are those employing bacteria. The plate incorporation assay using various Salmonella typhimurium LT2 and E. coli WP2 strains is a short-term bacterial reverse mutation assay specifically designed to detect a wide range of chemical substances capable of causing DNA damage leading to gene mutations. The test is used worldwide as an initial screen to determine the mutagenic potential of new chemicals and drugs.The test uses several strains of S. typhimurium which carry different mutations in various genes of the histidine operon, and E. coli which carry the same AT base pair at the critical mutation site within the trpE gene. These mutations act as hot spots for mutagens that cause DNA damage via different mechanisms. When these auxotrophic bacterial strains are grown on a minimal media agar plates containing a trace of the required amino-acid (histidine or tryptophan), only those bacteria that revert to amino-acid independence (His(+) or Tryp(+)) will grow to form visible colonies. The number of spontaneously induced revertant colonies per plate is relatively constant. However, when a mutagen is added to the plate, the number of revertant colonies per plate is increased, usually in a dose-related manner.This chapter provides detailed procedures for performing the test in the presence and absence of a metabolic activation system (S9-mix), including advice on specific assay variations and any technical problems. PMID:22147566

  4. OxyR and SoxR modulate the inducible oxidative stress response and are implicated during different stages of infection for the bacterial phytopathogen Pantoea stewartii subsp. stewartii.

    Science.gov (United States)

    Burbank, Lindsey; Roper, M Caroline

    2014-05-01

    Reactive oxygen species (ROS) from a variety of sources are often encountered by invading plant pathogens during the infection process. Pantoea stewartii subsp. stewartii, the etiological agent of Stewart's wilt, is a serious bacterial pathogen of sweet corn that colonizes both the apoplast and xylem tissues in which ROS are produced. The P. stewartii genome predicts the presence of two redox-sensing transcriptional regulators, OxyR and SoxR, which both activate gene expression in response to oxidative stress. ROS exposure in the form of hydrogen peroxide and the superoxide-generating compound paraquat initiates an induced stress response through OxyR and SoxR that includes activation of the ROS-detoxifying enzymes alkyl hydroperoxide reductase and superoxide dismutase. P. stewartii ΔsoxR was more sensitive to paraquat and was compromised in the ability to form water-soaked lesions, while ΔoxyR was more sensitive to hydrogen peroxide treatment and was deficient in exopolysaccharide production and the elicitation of wilting symptoms. This demonstrates that both SoxR and OxyR play an important role in virulence in the different niches that P. stewartii colonize during the infection process. PMID:24450773

  5. Increased airway glucose increases airway bacterial load in hyperglycaemia.

    Science.gov (United States)

    Gill, Simren K; Hui, Kailyn; Farne, Hugo; Garnett, James P; Baines, Deborah L; Moore, Luke S P; Holmes, Alison H; Filloux, Alain; Tregoning, John S

    2016-01-01

    Diabetes is associated with increased frequency of hospitalization due to bacterial lung infection. We hypothesize that increased airway glucose caused by hyperglycaemia leads to increased bacterial loads. In critical care patients, we observed that respiratory tract bacterial colonisation is significantly more likely when blood glucose is high. We engineered mutants in genes affecting glucose uptake and metabolism (oprB, gltK, gtrS and glk) in Pseudomonas aeruginosa, strain PAO1. These mutants displayed attenuated growth in minimal medium supplemented with glucose as the sole carbon source. The effect of glucose on growth in vivo was tested using streptozocin-induced, hyperglycaemic mice, which have significantly greater airway glucose. Bacterial burden in hyperglycaemic animals was greater than control animals when infected with wild type but not mutant PAO1. Metformin pre-treatment of hyperglycaemic animals reduced both airway glucose and bacterial load. These data support airway glucose as a critical determinant of increased bacterial load during diabetes. PMID:27273266

  6. Bacterial-induced expression of RAB18 protein in Orzya sativa salinity stress and insights into molecular interaction with GTP ligand.

    Science.gov (United States)

    Jha, Yachana; Sablok, Gaurav; Subbarao, Naidu; Sudhakar, Raja; Fazil, M H U Turabe; Subramanian, R B; Squartini, Andrea; Kumar, Sunil

    2014-09-01

    In the present research, we have studied the inoculation effects of two root-associated plant growth-promoting rhizobacteria (PGPR) in rice and provide the pieces of evidence that the inoculation of the PGPR could potentially result in inducing the expression of the salt stress-related RAB18 plant gene under varying degrees of salinity stress. The sequenced putative gene of RAB18 of Oryza sativa in this study is 740 bp long, has a content of 44.4%, and a molecular weight of 492 102.00 Da. BLAST homology patterns revealed sequence similarity with the previously sequenced RAB in model plant species. We demonstrate the mode of action of this stress-related protein by performing comparative modeling of Q10RT8 (Os03g0146000 protein, homolog of the sequenced RAB18; O. sativa subsp. japonica) using energy minimization, molecular dynamic simulations, and molecular docking of a guanosine triphosphate (GTP) ligand with the protein. The docking results indicated that Ser21, Ala22, Lys25, Asp68, Ala70, Glu73, and Arg74 are important determinant residues for functional interaction with the GTP ligand. The present research contributes to the understanding of the PGPR inoculation in salinity stress. Additionally, it provides the layout of the understanding of the molecular interactions between RAB and GTP ligand. PMID:25042706

  7. Fluorescent turn-on sensing of bacterial lipopolysaccharide in artificial urine sample with sensitivity down to nanomolar by tetraphenylethylene based aggregation induced emission molecule.

    Science.gov (United States)

    Jiang, Guoyu; Wang, Jianguo; Yang, Yang; Zhang, Guanxin; Liu, Yaling; Lin, He; Zhang, Guilan; Li, Yongdong; Fan, Xiaolin

    2016-11-15

    A tetraphenylethylene based aggregation induced emission (AIE) probe, TPEPyE, bearing a positively charged pyridinium pendant was designed and synthesized. The positively charged TPEPyE can efficiently bind to the negatively charged lipopolysaccharide (LPS) through electrostatic interactions between the two oppositely charged species. As a result, upon the addition of LPS into the PBS solution of TPEPyE, this probe aggregated immediately onto the surface of LPS and resulted over 22-fold of fluorescence enhancement. TPEPyE exhibited good selectivity and high sensitivity toward LPS in PBS buffer solution and the detection limit was calculated to be 370 pM (3.7ng/mL). More notably, TPEPyE also retained good sensitivity and selectivity in artificial urine system (with much higher ionic strength) with the detection limit down to nanomolar. Moreover, this probe can also make a distinction between gram-positive bacteria Staphylococcus aureus (S. aureus) and gram-negative bacteria Escherichia coli (E. coli), making it a promising sensor for clinical monitoring of urinary tract infections. PMID:27155117

  8. Bacterial Wound Culture

    Science.gov (United States)

    ... Home Visit Global Sites Search Help? Bacterial Wound Culture Share this page: Was this page helpful? Also known as: Aerobic Wound Culture; Anaerobic Wound Culture Formal name: Culture, wound Related ...

  9. Bacterial Meningitis in Infants

    Directory of Open Access Journals (Sweden)

    J Gordon Millichap

    2004-04-01

    Full Text Available A retrospective study of 80 infantile patients (ages 30-365 days; 47 male, 33 female with culture-proven bacterial meningitis seen over a 16 year period (1986-2001 is reported from Taiwan.

  10. An actualistic perspective into Archean worlds - (cyano-)bacterially induced sedimentary structures in the siliciclastic Nhlazatse Section, 2.9 Ga Pongola Supergroup, South Africa.

    Science.gov (United States)

    Noffke, N; Beukes, N; Bower, D; Hazen, R M; Swift, D J P

    2008-01-01

    Extensive microbial mats colonize sandy tidal flats that form along the coasts of today's Earth. The microbenthos (mainly cyanobacteria) respond to the prevailing physical sediment dynamics by biostabilization, baffling and trapping, as well as binding. This biotic-physical interaction gives rise to characteristic microbially induced sedimentary structures (MISS) that differ greatly from both purely physical structures and from stromatolites. Actualistic studies of the MISS on modern tidal flats have been shown to be the key for understanding equivalent fossil structures that occur in tidal and shelf sandstones of all Earth ages. However, until now the fossil record of Archean MISS has been poor, and relatively few specimens have been found. This paper describes a study location that displays a unique assemblage with a multitude of exceptionally preserved MISS in the 2.9-Ga-old Pongola Supergroup, South Africa. The 'Nhlazatse Section' includes structures such as 'erosional remnants and pockets', 'multidirected ripple marks', 'polygonal oscillation cracks', and 'gas domes'. Optical and geochemical analyses support the biogenicity of microscopic textures such as filamentous laminae or 'orientated grains'. Textures resembling filaments are lined by iron oxide and hydroxides, as well as clay minerals. They contain organic matter, whose isotope composition is consistent with carbon of biological origin. The ancient tidal flats of the Nhlazatse Section record four microbial mat facies that occur in modern tidal settings as well. We distinguish endobenthic and epibenthic microbial mats, including planar, tufted, and spongy subtypes. Each microbial mat facies is characterized by a distinct set of MISS, and relates to a typical tidal zone. The microbial mat structures are preserved in situ, and are consistent with similar features constructed today by benthic cyanobacteria. However, other mat-constructing microorganisms also could have formed the structures in the Archean

  11. Sub-chronic exposure to the insecticide dimethoate induces a proinflammatory status and enhances the neuroinflammatory response to bacterial lypopolysaccharide in the hippocampus and striatum of male mice

    International Nuclear Information System (INIS)

    Dimethoate is an organophosphorus insecticide extensively used in horticulture. Previous studies have shown that the administration of dimethoate to male rats, at a very low dose and during a sub-chronic period, increases the oxidation of lipids and proteins, reduces the levels of antioxidants and impairs mitochondrial function in various brain regions. In this study, we have assessed in C57Bl/6 adult male mice, whether sub-chronic (5 weeks) intoxication with a low dose of dimethoate (1.4 mg/kg) affects the expression of inflammatory molecules and the reactivity of microglia in the hippocampus and striatum under basal conditions and after an immune challenge caused by the systemic administration of lipopolysaccharide. Dimethoate increased mRNA levels of tumor necrosis factor α (TNFα) and interleukin (IL) 6 in the hippocampus, and increased the proportion of Iba1 immunoreactive cells with reactive phenotype in dentate gyrus and striatum. Lipopolysaccharide caused a significant increase in the mRNA levels of IL1β, TNFα, IL6 and interferon-γ-inducible protein 10, and a significant increase in the proportion of microglia with reactive phenotype in the hippocampus and the striatum. Some of the effects of lipopolysaccharide (proportion of Iba1 immunoreactive cells with reactive phenotype and IL6 mRNA levels) were amplified in the animals treated with dimethoate, but only in the striatum. These findings indicate that a sub-chronic period of administration of a low dose of dimethoate, comparable to the levels of the pesticide present as residues in food, causes a proinflammatory status in the brain and enhances the neuroinflammatory response to the lipopolysaccharide challenge with regional specificity. - Highlights: • The dose of pesticide used was comparable to the levels of residues found in food. • Dimethoate administration increased cytokine expression and microglia reactivity. • Hippocampus and striatum were differentially affected by the treatment.

  12. Sub-chronic exposure to the insecticide dimethoate induces a proinflammatory status and enhances the neuroinflammatory response to bacterial lypopolysaccharide in the hippocampus and striatum of male mice

    Energy Technology Data Exchange (ETDEWEB)

    Astiz, Mariana, E-mail: marianaastiz@gmail.com; Diz-Chaves, Yolanda, E-mail: ydiz@cajal.csic.es; Garcia-Segura, Luis M., E-mail: lmgs@cajal.csic.es

    2013-10-15

    Dimethoate is an organophosphorus insecticide extensively used in horticulture. Previous studies have shown that the administration of dimethoate to male rats, at a very low dose and during a sub-chronic period, increases the oxidation of lipids and proteins, reduces the levels of antioxidants and impairs mitochondrial function in various brain regions. In this study, we have assessed in C57Bl/6 adult male mice, whether sub-chronic (5 weeks) intoxication with a low dose of dimethoate (1.4 mg/kg) affects the expression of inflammatory molecules and the reactivity of microglia in the hippocampus and striatum under basal conditions and after an immune challenge caused by the systemic administration of lipopolysaccharide. Dimethoate increased mRNA levels of tumor necrosis factor α (TNFα) and interleukin (IL) 6 in the hippocampus, and increased the proportion of Iba1 immunoreactive cells with reactive phenotype in dentate gyrus and striatum. Lipopolysaccharide caused a significant increase in the mRNA levels of IL1β, TNFα, IL6 and interferon-γ-inducible protein 10, and a significant increase in the proportion of microglia with reactive phenotype in the hippocampus and the striatum. Some of the effects of lipopolysaccharide (proportion of Iba1 immunoreactive cells with reactive phenotype and IL6 mRNA levels) were amplified in the animals treated with dimethoate, but only in the striatum. These findings indicate that a sub-chronic period of administration of a low dose of dimethoate, comparable to the levels of the pesticide present as residues in food, causes a proinflammatory status in the brain and enhances the neuroinflammatory response to the lipopolysaccharide challenge with regional specificity. - Highlights: • The dose of pesticide used was comparable to the levels of residues found in food. • Dimethoate administration increased cytokine expression and microglia reactivity. • Hippocampus and striatum were differentially affected by the treatment.

  13. Effect of Sample Preparation on the Discrimination of Bacterial Isolates Cultured in Liquid Nutrient Media Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Gamble, Gary R; Park, Bosoon; Yoon, Seung-Chul; Lawrence, Kurt C

    2016-03-01

    Laser-induced breakdown spectroscopy (LIBS) is used as the basis for discrimination between two genera of gram-negative bacteria and two genera of gram-positive bacteria representing pathogenic threats commonly found in poultry processing rinse waters. Because LIBS-based discrimination relies primarily upon the relative proportions of inorganic cell components including Na, K, Mg, and Ca, this study aims to determine the effects of trace mineral content and pH found in the water source used to isolate the bacteria upon the reliability of the resulting discriminant analysis. All four genera were cultured using tryptic soy agar (TSA) as the nutrient medium, and were grown under identical environmental conditions. The only variable introduced is the source water used to isolate the cultured bacteria. Cultures of each bacterium were produced using deionized (DI) water under two atmosphere conditions, reverse osmosis (RO) water, tap water, phosphate buffered saline (PBS) water, and TRIS buffered water. After 3 days of culture growth, the bacteria were centrifuged and washed three times in the same water source. Bacteria were then freeze dried, mixed with microcrystalline cellulose, and a pellet was made for LIBS analysis. Principal component analysis (PCA) was used to extract related variations in LIBS spectral data among the four bacteria genera and six water types used to isolate the bacteria, and Mahalanobis discriminant analysis (MDA) was used for classification. Results indicate not only that the four genera can be discriminated from each other in each water type, but that each genus can be discriminated by water type used for isolation. It is concluded that in order for LIBS to be a reliable and repeatable method for discrimination of bacteria grown in liquid nutrient media, care must be taken to insure that the water source used in purification of the culture be precisely controlled regarding pH, ionic strength, and proportionate amounts of mineral cations

  14. Calibrating bacterial evolution

    OpenAIRE

    Ochman, Howard; Elwyn, Susannah; Moran, Nancy A

    1999-01-01

    Attempts to calibrate bacterial evolution have relied on the assumption that rates of molecular sequence divergence in bacteria are similar to those of higher eukaryotes, or to those of the few bacterial taxa for which ancestors can be reliably dated from ecological or geological evidence. Despite similarities in the substitution rates estimated for some lineages, comparisons of the relative rates of evolution at different classes of nucleotide sites indicate no basis for their universal appl...

  15. Precipitation Measurements from Space: The Global Precipitation Measurement Mission

    Science.gov (United States)

    Hou, Arthur Y.

    2007-01-01

    Water is fundamental to the life on Earth and its phase transition between the gaseous, liquid, and solid states dominates the behavior of the weather/climate/ecological system. Precipitation, which converts atmospheric water vapor into rain and snow, is central to the global water cycle. It regulates the global energy balance through interactions with clouds and water vapor (the primary greenhouse gas), and also shapes global winds and dynamic transport through latent heat release. Surface precipitation affects soil moisture, ocean salinity, and land hydrology, thus linking fast atmospheric processes to the slower components of the climate system. Precipitation is also the primary source of freshwater in the world, which is facing an emerging freshwater crisis in many regions. Accurate and timely knowledge of global precipitation is essential for understanding the behavior of the global water cycle, improving freshwater management, and advancing predictive capabilities of high-impact weather events such as hurricanes, floods, droughts, and landslides. With limited rainfall networks on land and the impracticality of making extensive rainfall measurements over oceans, a comprehensive description of the space and time variability of global precipitation can only be achieved from the vantage point of space. This presentation will examine current capabilities in space-borne rainfall measurements, highlight scientific and practical benefits derived from these observations to date, and provide an overview of the multi-national Global Precipitation Measurement (GPM) Mission scheduled to bc launched in the early next decade.

  16. Accelerated oxygen precipitation in fast neutron irradiated Czochralski silicon

    Institute of Scientific and Technical Information of China (English)

    Ma Qiao-Yun; Li Yang-Xian; Chen Gui-Feng; Yang Shuai; Liu Li-Li; Niu Ping-Juan; Chen Dong-Feng; Li Hong-Tao

    2005-01-01

    Annealing effect of the oxygen precipitation and the induced defects have been investigated on the fast neutron irradiated Czochralski silicon (CZ-Si) by infrared absorption spectrum and the optical microscopy. It is found that the fast neutron irradiation greatly accelerates the oxygen precipitation that leads to a sharp decrease of the interstitial oxygen with the annealing time. At room temperature (RT), the 1107cm-1 infrared absorption band of interstitial oxygen becomes weak and broadens to low energy side. At low temperature, the infrared absorption peaks appear at 1078cm-1, 1096cm-1, and 1182cm-1, related to different shapes of the oxygen precipitates. The bulk microdefects,including stacking faults, dislocations and dislocation loops, were observed by the optical microscopy. New or large stacking faults grow up when the silicon self-interstitial atoms are created and aggregate with oxygen precipitation.

  17. Environmental Radioactivity, Temperature, and Precipitation.

    Science.gov (United States)

    Riland, Carson A.

    1996-01-01

    Reports that environmental radioactivity levels vary with temperature and precipitation and these effects are due to radon. Discusses the measurement of this environmental radioactivity and the theory behind it. (JRH)

  18. The precipitation of vanadium compounds

    International Nuclear Information System (INIS)

    The results of a study on the chemistry of the precipitation process of vanadium compounds in sulfuric media are presented, in order to recover the vanadium contained in the ore from Campo Alegre de Lourdes (Bahia-Brazil). (Author)

  19. Heavy Precipitation Events in Lithuania

    Science.gov (United States)

    Bukantis, A.; Rimkus, E.; Kažys, J.

    2010-09-01

    Analysis of heavy precipitation events in Lithuania is presented in this work. Research was divided into two parts. Spatial distribution and dynamic of heavy precipitation events in Lithuania during observation period (1961-2008) is presented in the first part and climate predictions for XXI century according to outputs of CCLM model are in the second. Daily data from 17 meteorological stations were used for the analysis of heavy precipitation events in Lithuania. Research covers period from 1961 to 2008. Annual and seasonal heavy precipitation values and the recurrence of extreme daily and 3-day precipitation events were analyzed. Spatial distribution of heavy precipitation events in Lithuania was determined; the trends of such precipitation recurrence were identified. Also, daily and 3-day annual maxima probabilities were calculated using the Generalized Extreme Value (GEV) distribution. 10, 30 and 100 years return period was analyzed. Finally, atmospheric circulation processes during heavy precipitation events were described using the adapted Hess & Brezowski macrocirculation form classification Predictions of changes of heavy precipitation recurrence in Lithuania are also presented in this study. Output data of the regional climate model CCLM (COSMO - Climate Limited-area Model) for the period 1971-2100 were used. Predictions were based on A1B and B1 emission scenarios. Despite of relatively small area and quite negligible differences in altitude there are significant unevenness in spatial distribution of heavy precipitation events in Lithuania. The mean annual number of cases when daily precipitation amount exceeded 10 mm fluctuates from 12.4 to 21.9 and from 5.3 to 10.5 when 3-day precipitation exceeded 20 mm. The probability of maximum precipitation amount for 10 year return period appears very familiar to spatial distribution of heavy precipitation recurrence: the highest values can be expected in the western part (55-60 mm daily and 75-85 mm in 3-days

  20. Hourly and Daily Precipitation Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Precipitation reports submitted on many form types, including tabular and autographic charts. Reports are almost exclusively from the US Cooperative Observer Network.

  1. Atrial Ectopics Precipitating Atrial Fibrillation

    OpenAIRE

    Johnson Francis

    2015-01-01

    Holter monitor tracing showing blocked atrial ectopics and atrial ectopic precipitating atrial fibrillation is being demonstrated. Initially it was coarse atrial fibrillation, which rapidly degenerated into fine atrial fibrillation.

  2. Global Precipitation Measurement (GPM) implementation

    Science.gov (United States)

    Neeck, Steven P.; Kakar, Ramesh K.; Azarbarzin, Ardeshir A.; Hou, Arthur Y.

    2010-10-01

    The Global Precipitation Measurement (GPM) mission will provide enhanced space-based precipitation measurements with sufficient coverage, spatial resolution, temporal sampling, retrieval accuracy, and microphysical information to advance the understanding of Earth's water and energy cycle and to improve predictions of its climate, weather, and hydrometeorological processes. Such improvements will in turn improve decision support systems in broad societal applications (e.g. water resource management, agriculture, transportation, etc). GPM is a partnership between NASA and the Japan Aerospace Exploration Agency (JAXA), building upon their highly successful partnership on the Tropical Rainfall Measuring Mission (TRMM). The GPM architecture consists of NASA satellites operating in partnership with other earth-observing satellites and instruments to produce global precipitation science data. The current generation of multi-satellite global precipitation products based on microwave/infrared sensors from uncoordinated satellite missions has for its anchor the TRMM precipitation radar and the TRMM Microwave Imager measurements over the tropics and subtropics (+/- 35 degrees latitude), with a mean sampling time of approximately 17 hours. The GPM mission will deploy a spaceborne Core Observatory as a reference standard to unify a space constellation of research and operational microwave sensors aimed at providing uniformly calibrated precipitation measurements globally every 2-4 hours. The Core Observatory measurements will provide, for the first time, quantitative information on precipitation particle size distribution needed for improving the accuracy of precipitation estimates by microwave radiometers and radars. In addition, the GPM will also include a second microwave radiometer and a Tracking and Data Relay Satellite (TDRS) communications subsystem for near real time data relay for a future partner-provided constellation satellite. This second GPM Microwave Imager (GMI

  3. Development of precipitator of fluid film type

    International Nuclear Information System (INIS)

    The precipitator of fluid film type is developed for the determination of fuel element cladding failure of water-cooled reactor. It integrates the scrubber, precipitator and detector. The jet of element cooling water automatically circulates carrier gas and the flow water film transfers precipitates onto the surface of centre electrode. Three different types are designed. On the special test loop, the uranium sample pellets of simulating cladding failure is measured. The sensitivity of precipitators, saturated precipitation voltage, incremental speed of signal, speed of driving out precipitates and the contents of the precipitates are determined. The test shows that the precipitators are highly sensitive, reliable, cheap and easy to operate

  4. Irrigation water quality in southern Mexico City based on bacterial and heavy metal analyses

    Energy Technology Data Exchange (ETDEWEB)

    Solis, C. [Instituto de Fisica, Universidad Nacional Autonoma de Mexico, Apdo Postal 20-364, 01000 Mexico, DF (Mexico)]. E-mail: corina@fisica.unam.mx; Sandoval, J. [Instituto de Ecologia, Universidad Nacional Autonoma de Mexico, Apdo Postal 70-275, 04510 Mexico, DF (Mexico); Perez-Vega, H. [Ciencias Agropecuarias, Universidad Juarez Autonoma de Tabasco, Ave. Universidad S/N. Zona de la Cultura, 86040 Villa Hermosa, Tabasco (Mexico); Mazari-Hiriart, M. [Instituto de Ecologia, Universidad Nacional Autonoma de Mexico, Apdo Postal 70-275, 04510 Mexico, DF (Mexico)

    2006-08-15

    Xochimilco is located in southern Mexico City and represents the reminiscence of the pre-Columbian farming system, the 'chinampa' agriculture. 'Chinampas' are island plots surrounded by a canal network. At present the area is densely urbanized and populated, with various contaminant sources contributing to the water quality degradation. The canal system is recharged by a combination of treated-untreated wastewater, and precipitation during the rainy season. Over 40 agricultural species, including vegetables, cereals and flowers, are produced in the 'chinampas'. In order to characterize the quality of Xochimilcos' water used for irrigation, spatial and temporal contaminant indicators such as microorganisms and heavy metals were investigated. Bacterial indicators (fecal coliforms, fecal enterococcus) were analyzed by standard analytical procedures, and heavy metals (such as Fe, Cu, Zn and Pb) were analyzed by particle induced X-ray emission (PIXE). The more contaminated sites coincide with the heavily populated areas. Seasonal variation of contaminants was observed, with the higher bacterial counts and heavy metal concentrations reported during the rainy season.

  5. Irrigation water quality in southern Mexico City based on bacterial and heavy metal analyses

    International Nuclear Information System (INIS)

    Xochimilco is located in southern Mexico City and represents the reminiscence of the pre-Columbian farming system, the 'chinampa' agriculture. 'Chinampas' are island plots surrounded by a canal network. At present the area is densely urbanized and populated, with various contaminant sources contributing to the water quality degradation. The canal system is recharged by a combination of treated-untreated wastewater, and precipitation during the rainy season. Over 40 agricultural species, including vegetables, cereals and flowers, are produced in the 'chinampas'. In order to characterize the quality of Xochimilcos' water used for irrigation, spatial and temporal contaminant indicators such as microorganisms and heavy metals were investigated. Bacterial indicators (fecal coliforms, fecal enterococcus) were analyzed by standard analytical procedures, and heavy metals (such as Fe, Cu, Zn and Pb) were analyzed by particle induced X-ray emission (PIXE). The more contaminated sites coincide with the heavily populated areas. Seasonal variation of contaminants was observed, with the higher bacterial counts and heavy metal concentrations reported during the rainy season

  6. Bacterial Reduction Of Barium Sulphate By Sulphate-Reducing Bacteria

    Directory of Open Access Journals (Sweden)

    Luptáková Alena

    2015-12-01

    Full Text Available Acid mine drainage (AMD is a worldwide problem leading to contamination of water sources. AMD are characterized by low pH and high content of heavy metals and sulphates. The barium salts application presents one of the methods for the sulphates removing from AMD. Barium chloride, barium hydroxide and barium sulphide are used for the sulphates precipitation in the form of barium sulphate. Because of high investment costs of barium salts, barium sulphide is recycled from barium sulphate precipitates. It can be recycled by thermic or bacterial reduction of barium sulphate. The aim of our study was to verify experimentally the possibility of the bacterial transformation of BaSO4 to BaS by sulphate-reducing bacteria. Applied BaSO4 came from experiments of sulphates removal from Smolnik AMD using BaCl2.

  7. Mucosal SIV vaccines comprising inactivated virus particles and bacterial adjuvants induce CD8+T-regulatory cells that suppress SIV positive CD4+cell activation and prevent SIV infection in the macaque model.

    Directory of Open Access Journals (Sweden)

    Jean Marie eAndrieu

    2014-06-01

    Full Text Available A new paradigm of mucosal vaccination against HIV infection has been investigated in the macaque model. A vaccine consisting of inactivated SIVmac239 particles together with a living bacterial adjuvant (either the Calmette & Guerin bacillus, lactobacillus plantarum or Lactobacillus rhamnosus was administered to macaques via the vaginal or oral/intragastic route. In contrast to all established human and veterinary vaccines, these three vaccine regimens did not elicit SIV-specific antibodies nor cytotoxic T-lymphocytes but induced a previously unrecognized population of non-cytolytic MHCIb/E-restricted CD8+T regulatory cells that suppressed the activation of SIV positive CD4+ T-lymphocytes. SIV reverse transcription was thereby blocked in inactivated CD4+ T-cells; the initial burst of virus replication was prevented and the vaccinated macaques were protected from a challenge infection. Three to 14 months after intragastric immunization, 24 macaques were challenged intrarectally with a high dose of SIVmac239 or with the heterologous strain SIV B670 (both strains grown on macaques PBMC. Twenty-three of these animals were found to be protected for up to 48 months while all 24 control macaques became infected. This protective effect against SIV challenge together with the concomitant identification of a robust ex-vivo correlate of protection suggests a new approach for developing an HIV vaccine in humans. The induction of this new class of CD8+ T regulatory cells could also possibly be used therapeutically for suppressing HIV replication in infected patients and this novel tolerogenic vaccine paradigm may have potential applications for treating a wide range of immune disorders and is likely to may have profound implications across immunology generally.

  8. Bacterial meningitis in children

    International Nuclear Information System (INIS)

    To demonstrate the epidemiology, clinical manifestations and bacteriological profile of bacterial meningitis in children beyond the neonatal period in our hospital. This was a retrospective descriptive study conducted at Prince Rashid Hospital in Irbid, Jordan. The medical records of 50 children with the diagnosis of bacterial meningitis during 4 years period, were reviewed. The main cause of infection was streptococcus pneumoniae, followed by Haemophilus influenza and Niesseria meningitides. Mortality was higher in infants and meningococcal infection, while complications were more encountered in cases of streptococcus pneumoniae. Cerebrospinal fluid culture was positive in 11 cases and Latex agglutination test in 39. There is a significant reduction of the numbers of bacterial meningitis caused by Haemophilus influenza type B species. (author)

  9. Diagnosis of bacterial vaginosis

    Directory of Open Access Journals (Sweden)

    Đukić Slobodanka

    2013-01-01

    Full Text Available Bacterial vaginosis is a common, complex clinical syndrome characterized by alterations in the normal vaginal flora. When symptomatic, it is associated with a malodorous vaginal discharge and on occasion vaginal burning or itching. Under normal conditions, lactobacilli constitute 95% of the bacteria in the vagina. Bacterial vaginosis is associated with severe reduction or absence of the normal H2O2­producing lactobacilli and overgrowth of anaerobic bacteria and Gardnerella vaginalis, Atopobium vaginae, Mycoplasma hominis and Mobiluncus species. Most types of infectious disease are diagnosed by culture, by isolating an antigen or RNA/DNA from the microbe, or by serodiagnosis to determine the presence of antibodies to the microbe. Therefore, demonstration of the presence of an infectious agent is often a necessary criterion for the diagnosis of the disease. This is not the case for bacterial vaginosis, since the ultimate cause of the disease is not yet known. There are a variety of methods for the diagnosis of bacterial vaginosis but no method can at present be regarded as the best. Diagnosing bacterial vaginosis has long been based on the clinical criteria of Amsel, whereby three of four defined criteria must be satisfied. Nugent’s scoring system has been further developed and includes validation of the categories of observable bacteria structures. Up­to­date molecular tests are introduced, and better understanding of vaginal microbiome, a clear definition for bacterial vaginosis, and short­term and long­term fluctuations in vaginal microflora will help to better define molecular tests within the broader clinical context.

  10. The Global Precipitation Measurement Mission

    Science.gov (United States)

    Jackson, Gail

    2014-05-01

    The Global Precipitation Measurement (GPM) mission's Core satellite, scheduled for launch at the end of February 2014, is well designed estimate precipitation from 0.2 to 110 mm/hr and to detect falling snow. Knowing where and how much rain and snow falls globally is vital to understanding how weather and climate impact both our environment and Earth's water and energy cycles, including effects on agriculture, fresh water availability, and responses to natural disasters. The design of the GPM Core Observatory is an advancement of the Tropical Rainfall Measuring Mission (TRMM)'s highly successful rain-sensing package [3]. The cornerstone of the GPM mission is the deployment of a Core Observatory in a unique 65o non-Sun-synchronous orbit to serve as a physics observatory and a calibration reference to improve precipitation measurements by a constellation of 8 or more dedicated and operational, U.S. and international passive microwave sensors. The Core Observatory will carry a Ku/Ka-band Dual-frequency Precipitation Radar (DPR) and a multi-channel (10-183 GHz) GPM Microwave Radiometer (GMI). The DPR will provide measurements of 3-D precipitation structures and microphysical properties, which are key to achieving a better understanding of precipitation processes and improving retrieval algorithms for passive microwave radiometers. The combined use of DPR and GMI measurements will place greater constraints on possible solutions to radiometer retrievals to improve the accuracy and consistency of precipitation retrievals from all constellation radiometers. Furthermore, since light rain and falling snow account for a significant fraction of precipitation occurrence in middle and high latitudes, the GPM instruments extend the capabilities of the TRMM sensors to detect falling snow, measure light rain, and provide, for the first time, quantitative estimates of microphysical properties of precipitation particles. The GPM Core Observatory was developed and tested at NASA

  11. Interfering with bacterial gossip

    DEFF Research Database (Denmark)

    Bjarnsholt, Thomas; Tolker-Nielsen, Tim; Givskov, Michael

    2011-01-01

    defense. Antibiotics exhibit a rather limited effect on biofilms. Furthermore, antibiotics have an ‘inherent obsolescence’ because they select for development of resistance. Bacterial infections with origin in bacterial biofilms have become a serious threat in developed countries. Pseudomonas aeruginosa......, resistance and QS inhibition as future antimicrobial targets, in particular those that would work to minimize selection pressures for the development of resistant bacteria.......Biofilm resilience poses major challenges to the development of novel antimicrobial agents. Biofilm bacteria can be considered small groups of “Special Forces” capable of infiltrating the host and destroying important components of the cellular defense system with the aim of crippling the host...

  12. Eocene precipitation: a global monsoon?

    Science.gov (United States)

    Greenwood, D. R.; Huber, M.

    2011-12-01

    The Eocene was the warmest part of the Cenozoic, with warm climates extending across all continents including Antarctica, and extending into the Arctic. Substantive paleobotanical evidence (leaf floras and palynofloras) has demonstrated the existence of broadleaf and coniferous polar forests - a circumpolar rain forest - at both poles. North and South America, Australia, and China in the Eocene were well-forested and humid continents, in contrast to today where 2/3 of these continental areas are arid or semi-arid and lack forests. Each of these regions reflect past climate states - mesothermal moist climates with low thermal seasonality at high latitudes - that have no analog in the modern world. Recent modelling and paleontological proxy data, however, is revealing a high degree of seasonality to precipitation for these continental areas, indicating a monsoon-type precipitation regime may have characterized Eocene 'greenhouse climates'. Paleobotanical proxies offer 2 methods for estimated paleo-precipitation; leaf physiognomy (including both CLAMP and leaf area analysis), and quantitative analysis of nearest living relatives ('NLRs') of macrofloras. Presented here are 1) an updated leaf area analysis calibration with smaller errors of the estimate than previously provided, and 2) analyses of fossil floras from North America, Canada, the Arctic, and Australia. Analysis of the Canadian floras indicate moist climates (MAP >100cm/a) in the early and middle Eocene at middle and high paleolatitudes. Precipitation for western North America at mid-latitudes is also estimated as high, but a seasonally dry interior and south-east is indicated. For Australia, precipitation in the south-east is estimated >120 cm/a, but the macrofloras indicate a drier interior (MAP ~60 cm/a) and seasonal drought, contradicting estimates of ~120 cm/a based on NLR analysis of pollen floras. Recently published data show that north-eastern China in the Eocene had a monsoonal-type seasonality for

  13. Enhancing the Effectiveness of Carbon Dioxide Flooding by Managing Asphaltene Precipitation

    Energy Technology Data Exchange (ETDEWEB)

    Deo, M.D.

    2001-01-12

    The objective of this project was to identify conditions at which carbon dioxide induced precipitation occurred in crude oils. Establishing compositions of the relevant liquid and solid phases was planned. Other goals of the project were to determine if precipitation occurred in cores and to implement thermodynamic and compositional models to examine the phenomenon. Exploring kinetics of precipitation was also one of the project goals. Crude oil from the Rangely Field (eastern Colorado) was used as a prototype.

  14. A novel chromatographic procedure for purification of bacterial plasmids.

    Science.gov (United States)

    Bywater, M; Bywater, R; Hellman, L

    1983-07-01

    A new, rapid procedure for purifying bacterial plasmids with high recovery is described. The sequence of operations consists essentially of treatment with alkali, ribonuclease, and proteinase K, followed by chisam extraction and gel filtration on Sephacryl S-1000, and finally a precipitation step using isopropanol at room temperature. The method gives rather good yields of plasmid DNA of high purity, and lends itself to scaling up. PMID:6312836

  15. Reinforcement of bacterial cellulose aerogels with biocompatible polymers

    OpenAIRE

    Pircher, N.; Veigel, S.; Aigner, N; Nedelec, J. M.; Rosenau, T.; Liebner, F.

    2014-01-01

    Bacterial cellulose (BC) aerogels, which are fragile, ultra-lightweight, open-porous and transversally isotropic materials, have been reinforced with the biocompatible polymers polylactic acid (PLA), polycaprolactone (PCL), cellulose acetate (CA), and poly(methyl methacrylate) (PMMA), respectively, at varying BC/polymer ratios. Supercritical carbon dioxide anti-solvent precipitation and simultaneous extraction of the anti-solvent using scCO2 have been used as core techniques for incorporating...

  16. Perspectives of bacterial ACC deaminase in phytoremediation.

    Science.gov (United States)

    Arshad, Muhammad; Saleem, Muhammad; Hussain, Sarfraz

    2007-08-01

    Phytoremediation of contaminated soil and water environments is regulated and coordinated by the plant root system, yet root growth is often inhibited by pollutant-induced stress. Prolific root growth could maximize rates of hyperaccumulation of inorganic contaminants or rhizodegradation of organic pollutants, and thus accelerate phytoremediation. Accelerated ethylene production in response to stress induced by contaminants is known to inhibit root growth and is considered as a major limitation in improving phytoremediation efficiency. Recent work shows that bacterial 1-aminocyclopropane-1-carboxylate (ACC) deaminase regulates ethylene levels in plants by metabolizing its precursor ACC into alpha-ketobutyric acid and ammonia. Plants inoculated with ACC deaminase bacteria or transgenic plants that express bacterial ACC deaminase genes can regulate their ethylene levels and consequently contribute to a more extensive root system. Such proliferation of roots in contaminated soil can lead to enhanced uptake of heavy metals or rhizodegradation of xenobiotics. PMID:17573137

  17. TEM investigations of fine niobium precipitates in HSLA steel

    Energy Technology Data Exchange (ETDEWEB)

    Beres, M.; Weirich, T.E.; Mayer, J. [Gemeinschaftslabor fuer Elektronenmikroskopie (GFE), RWTH Aachen, Aachen (Germany); Hulka, K. [Niobium Products Co. GmbH, Duesseldorf (Germany)

    2004-11-01

    Commercially produced 0.03% C, 0.08% Nb, 0.01% Ti high strength low alloyed (HSLA) steel in the form of 20 mm thick plates was investigated. The steel was thermomechanically processed and the mechanical properties of the steel were evaluated by tensile testing. Using analytical and high resolution transmission electron microscopy the distribution, morphology, composition, crystal structure and particle size of niobium and titanium carbonitrides were observed and identified in these steels. The distribution of the precipitates was found to be nearly random, with occasional occurrence of precipitation free zones. Complex agglomerates with a cubic TiN seed crystal overgrown by a cubic NbC particle were the most commonly observed precipitates. Further TEM analysis in the accelerated cooled and tempered specimens in 1/4 plate thickness did not reveal any evidence that additional precipitation in the ferrite occurred. Precipitation in ferrite was only detected after subsequent cold deformation and tempering of the same samples. By a combination of EFTEM, STEM, HRTEM in addition to EDX spectroscopy, a large population of strain induced NbC precipitates with fcc crystal structure ranging in size down to 2 nm were identified in the ferrite matrix. (orig.)

  18. Nanometer-scale metal precipitates in multicrystalline silicon solar cells

    International Nuclear Information System (INIS)

    In this study, we have utilized characterization methods to identify the nature of metal impurity precipitates in low performance regions of multicrystalline silicon solar cells. Specifically, we have utilized synchrotron-based x-ray fluorescence and x-ray absorption spectromicroscopy to study the elemental and chemical nature of these impurity precipitates, respectively. We have detected nanometer-scale precipitates of Fe, Cr, Ni, Cu, and Au in multicrystalline silicon materials from a variety of solar cell manufacturers. Additionally, we have obtained a direct correlation between the impurity precipitates and regions of low light-induced current, providing direct proof that metal impurities play a significant role in the performance of multicrystalline silicon solar cells. Furthermore, we have identified the chemical state of iron precipitates in the low-performance regions. These results indicate that the iron precipitates are in the form of oxide or silicate compound. These compounds are highly stable and cannot be removed with standard silicon processing, indicating remediation efforts via impurity removal need to be improved. Future improvements to multicrystalline silicon solar cell performance can be best obtained by inhibiting oxygen and metal impurity introduction as well as modifying thermal treatments during crystal growth to avoid oxide or silicate formation

  19. Contribution on quantification of the evolution of in-service induced precipitates in new 9 - 12% Cr steels; Beitrag zur Quantifizierung der Entwicklung betriebsbedingter Ausscheidungen in neuen 9 bis 12% Cr-Staehlen

    Energy Technology Data Exchange (ETDEWEB)

    Cerjak, H.; Hofer, P.; Schaffernak, B.

    1998-09-01

    The 9 - 12 % Cr steels designed for power plant operation at elevated steam parameters are affected by strong microstructural changes under only thermal or creep stress conditions at about 600 C, with those changes determining the performance of the material. Apart from other microstructural parameters, the precipitation conditions in these alloys play an important part. The paper presents a method for quantification of the precipitation in creep specimens of the cast alloy G-X12CrMoWVNbN-10-1-1, based on application of various types of electron microscopy. The paper discusses in particular the problems and uncertainty factors encountered with this approach and the measures taken to reduce the examination efforts as much as possible by combining for instance TEM bright-field microscopy with the EFTEM method. (orig./CB) [Deutsch] Die 9-12% Cr-Staehle, die fuer Kraftwerke mit hoeheren Dampfparametern vorgesehen sind, unterliegen waehrend einer rein thermischen bzw. Kriechbelastung im Bereich um 600 C starken Gefuegeveraenderungen, welche deren Eigenschaften im Einsatz bestimmen. Neben anderen Gefuegeparametern kommt dem Ausscheidungszustand in diesen Legierungen eine wichtige Rolle zu. In diesem Bericht wird eine Methode zur Quantifizierung des Ausscheidungszustandes in Kriechproben aus der Gusslegierung G-X12CrMoWVNbN-10-1-1 vorgestellt, welche auf der Anwendung verschiedener elektronenmikroskopischer Verfahren basiert. Dabei wird insbesondere auf die dabei auftretenden Probleme und Unsicherheitsfaktoren hingewiesen und versucht, durch Kombination der TEM-Hellfeld-Untersuchung mit der EFTEM-Methode den Untersuchungsaufwand moeglichst gering zu halten. (orig.)

  20. Timber Mountain Precipitation Monitoring Station

    International Nuclear Information System (INIS)

    A precipitation monitoring station was placed on the west flank of Timber Mountain during the year 2010. It is located in an isolated highland area near the western border of the Nevada National Security Site (NNSS), south of Pahute Mesa. The cost of the equipment, permitting, and installation was provided by the Environmental Monitoring Systems Initiative (EMSI) project. Data collection, analysis, and maintenance of the station during fiscal year 2011 was funded by the U.S. Department of Energy, National Nuclear Security Administration, Nevada Site Office Environmental Restoration, Soils Activity. The station is located near the western headwaters of Forty Mile Wash on the Nevada Test and Training Range (NTTR). Overland flows from precipitation events that occur in the Timber Mountain high elevation area cross several of the contaminated Soils project CAU (Corrective Action Unit) sites located in the Forty Mile Wash watershed. Rain-on-snow events in the early winter and spring around Timber Mountain have contributed to several significant flow events in Forty Mile Wash. The data from the new precipitation gauge at Timber Mountain will provide important information for determining runoff response to precipitation events in this area of the NNSS. Timber Mountain is also a groundwater recharge area, and estimation of recharge from precipitation was important for the EMSI project in determining groundwater flowpaths and designing effective groundwater monitoring for Yucca Mountain. Recharge estimation additionally provides benefit to the Underground Test Area Sub-project analysis of groundwater flow direction and velocity from nuclear test areas on Pahute Mesa. Additionally, this site provides data that has been used during wild fire events and provided a singular monitoring location of the extreme precipitation events during December 2010 (see data section for more details). This letter report provides a summary of the site location, equipment, and data collected in

  1. A mineralogical characterization of biogenic calcium carbonates precipitated by heterotrophic bacteria isolated from cryophilic polar regions.

    Science.gov (United States)

    Ronholm, J; Schumann, D; Sapers, H M; Izawa, M; Applin, D; Berg, B; Mann, P; Vali, H; Flemming, R L; Cloutis, E A; Whyte, L G

    2014-11-01

    Precipitation of calcium carbonate (CaCO3(s) ) can be driven by microbial activity. Here, a systematic approach is used to identify the morphological and mineralogical characteristics of CaCO3(s) precipitated during the heterotrophic growth of micro-organisms isolated from polar environments. Focus was placed on establishing mineralogical features that are common in bioliths formed during heterotrophic activity, while in parallel identifying features that are specific to bioliths precipitated by certain microbial phylotypes. Twenty microbial isolates that precipitated macroscopic CaCO3(s) when grown on B4 media supplemented with calcium acetate or calcium citrate were identified. A multimethod approach, including scanning electron microscopy, high-resolution transmission electron microscopy, and micro-X-ray diffraction (μ-XRD), was used to characterize CaCO3(s) precipitates. Scanning and transmission electron microscopy showed that complete CaCO3(s) crystal encrustation of Arthrobacter sp. cells was common, while encrustation of Rhodococcus sp. cells did not occur. Several euhedral and anhedral mineral formations including disphenoid-like epitaxial plates, rhomboid-like aggregates with epitaxial rhombs, and spherulite aggregates were observed. While phylotype could not be linked to specific mineral formations, isolates tended to precipitate either euhedral or anhedral minerals, but not both. Three anhydrous CaCO3(s) polymorphs (calcite, aragonite, and vaterite) were identified by μ-XRD, and calcite and aragonite were also identified based on TEM lattice-fringe d value measurements. The presence of certain polymorphs was not indicative of biogenic origin, although several mineralogical features such as crystal-encrusted bacterial cells, or casts of bacterial cells embedded in mesocrystals are an indication of biogenic origin. In addition, some features such as the formation of vaterite and bacterial entombment appear to be linked to certain phylotypes. Identifying

  2. Bacterial turbulence reduction by passive magnetic particle chains

    Science.gov (United States)

    Liu, Kuo-An; I, Lin

    2013-09-01

    We report the experimental observation of the bacterial turbulence reduction in dense E. coli suspensions by increasing the coupling of passive particle additives (paramagnetic particles). Applying an external magnetic field induces magnetic dipoles for particles and causes the formation of vertical chain bundles, which are hard for bacterial flows to tilt and break. The larger effective drag coefficient of chains causes slow horizontal motion of chains, which in turn form obstacles to suppress bacterial flows through the strong correlation in coherent bacterial clusters and intercluster interaction. The interruption of the upward energy flow from individual self-propelling bacteria to the larger scale in the bacterial turbulence with multiscaled coherent flow by the chain bundle leads to more severe suppression in the low frequency (wave number) regimes of the power spectra.

  3. Bacterial Skin Infections

    Science.gov (United States)

    ... or scraped, the injury should be washed with soap and water and covered with a sterile bandage. Petrolatum may be applied to open areas to keep the tissue moist and to try to prevent bacterial invasion. Doctors recommend that people do not use ...

  4. Bacterial microflora of nectarines

    Science.gov (United States)

    Microflora of fruit surfaces has been the best source of antagonists against fungi causing postharvest decays of fruit. However, there is little information on microflora colonizing surfaces of fruits other than grapes, apples, and citrus fruit. We characterized bacterial microflora on nectarine f...

  5. 褪黑素对细菌脂多糖导致的宫内感染脑损伤的保护作用%Protective effect of melatonin on brain injury of intrauterine infection induced by bacterial lipopolysaccharide

    Institute of Scientific and Technical Information of China (English)

    刘利芬; 钱志红; 史明

    2011-01-01

    Objective: To investigate the effect of melatonin on free radical in brain tissues of fetal rats with intrauterine infection,explore the protective effect of melatonin on brain tissues of fetal rats with intrauterine infection. Methods: The models of cerebral palsy rat induced by intrauterine infection were established by injecting bacterial lipopolysaccharide into pregnant rats, melatonin intervention was carried out; the SD rats on the 19th day after pregnancy were selected as blank control group, intrauterine infection group and melatonin treatment group; the pregnant rats in intrauterine infection group were treated with intraperitoneal injection of bacterial lipopolysaccharide (500 μg/kg), and the pregnant rats in melatonin treatment group were treated with intraperitoneal injection of bacterial lipopolysaccharide (500 μg/kg) and melatonin ( 10 mg/kg); then the rats in each group were divided into 2 - hour group, 6 - hour group and 12 - hour group according to different observing times, 4 pregnant rats in each group; the pregnant rats in each group were executed at corresponding time points, then the brain tissues of fetal rats were obtained; the superoxide dismutase (SOD) activity, glutathione peroxidase (GSH -Px) activity and malondialdehyde (MDA) content in the brain tissues of fetal rats after homogenate were detected; HE staining was used to observe the pathological changes of brain tissues, and the differences among different groups were compared. Results: Compared with blank control group, SOD activity and GSH- Px activity of brain tissues of fetal rats in intrauterine infection group decreased, MDA content increased;with the extension of infection time, the above - mentioned changes became more obvious, there was significant difference; compared with intrauterine infection group, SOD activity and GSH - Px activity of brain tissues of fetal rats in melatonin treatment group increased, MDA content decreased. Conclusion: Brain injury of fetal rats with

  6. Magnetic filtration of precipitated magnetite

    International Nuclear Information System (INIS)

    It has been established that treatment of iron-rich alpha contaminated effluent streams by precipitating the iron as ferric floc or magnetite is an effective method of actinide removal. The work reported here shows the effect of four major parameters on the efficiency of the magnetic separation process. These are, the magnetic field strength, the structure of the matrix, the linear velocity of the magnetite suspension during filtration, and the chemical composition of the effluent stream from which magnetite is precipitated. (U.K.)

  7. The characterisation of precipitated magnetites

    International Nuclear Information System (INIS)

    Methods are described for the preparation of magnetite by precipitation from aqueous solutions of iron(II) and iron(III) salts. The magnetites have been characterised by transmission electron microscopy, chemical analysis and X-ray diffraction. Transmission Moessbauer spectroscopy has also been used to characterise precipitated magnetites and a comparison of the spectra has been made with those obtained from nickel ferrite and hydrated ferric oxides. The hydrothermal stability of magnetite at 573 K has also been investigated. This work is relevant to corrosion processes that can occur in the water coolant circuits of nuclear reactors. (author)

  8. Lead Precipitation by Vibrio harveyi: Evidence for Novel Quorum-Sensing Interactions

    Science.gov (United States)

    Mire, Chad E.; Tourjee, Jeanette A.; O'Brien, William F.; Ramanujachary, Kandalam V.; Hecht, Gregory B.

    2004-01-01

    Three pleiotropic, quorum sensing-defective Vibrio harveyi mutants were observed to precipitate soluble Pb2+ as an insoluble compound. The compound was purified and subjected to X-ray diffraction and elemental analyses. These assays identified the precipitated compound as Pb9(PO4)6, an unusual and complex lead phosphate salt that is produced synthetically at temperatures of ca. 200°C. Regulation of the precipitation phenotype was also examined. Introduction of a luxO::kan allele into one of the mutants abolished lead precipitation, indicating that the well-characterized autoinducer 1 (AI1)-AI2 quorum-sensing system can block lead precipitation in dense cell populations. Interestingly, the V. harveyi D1 mutant, a strain defective for secretion of both AI1 and AI2, was shown to be an effective trans inhibitor of lead precipitation. This suggests that a previously undescribed V. harveyi autoinducer, referred to as AI3, can also negatively regulate lead precipitation. Experiments with heterologous bacterial populations demonstrated that many different species are capable of trans regulating the V. harveyi lead precipitation phenotype. Moreover, one of the V. harveyi mutants in this study exhibited little or no response to intercellular signals from other V. harveyi inocula but was quite responsive to some of the heterologous bacteria. Based on these observations, we propose that V. harveyi carries at least one quorum sensor that is specifically dedicated to receiving cross-species communication. PMID:14766565

  9. Influence of Substrate Mineralogy on Bacterial Mineralization of Calcium Carbonate: Implications for Stone Conservation

    OpenAIRE

    Rodriguez-Navarro, Carlos; Jroundi, Fadwa; Schiro, Mara; Ruiz-Agudo, Encarnación; González-Muñoz, María Teresa

    2012-01-01

    The influence of mineral substrate composition and structure on bacterial calcium carbonate productivity and polymorph selection was studied. Bacterial calcium carbonate precipitation occurred on calcitic (Iceland spar single crystals, marble, and porous limestone) and silicate (glass coverslips, porous sintered glass, and quartz sandstone) substrates following culturing in liquid medium (M-3P) inoculated with different types of bacteria (Myxococcus xanthus, Brevundimonas diminuta, and a carb...

  10. Precipitation of sigma and chi phases in δ-ferrite of Type 316FR weld metals

    International Nuclear Information System (INIS)

    The decomposition behavior and kinetics of δ-ferrite are examined using aging treatments between 873 and 1073 K for Type 316FR stainless steel weld metals with different solidification modes (316FR AF, 316FR FA). The dominant precipitates are sigma, chi, and secondary austenite nucleated at δ-ferrite/austenite interfaces or in the interior of the ferrite grains. These precipitates consume all the ferrite during isothermal aging in both 316FR AF and FA weld metals. Differences in the precipitation behavior (precipitation initiation time and precipitation speed) between weld metals can be explained by i) the degree of Cr and Mo microsegregation within δ-ferrite or austenite near ferrite and ii) the nucleation sites induced due to the solidification mode (AF or FA), such as the ferrite amount. For both weld materials, a Johnson–Mehl-type equation can express the precipitation behavior of the sigma + chi phases and quantitatively predict the behavior at the service-exposure temperatures of a fast breed reactor. - Highlights: • Precipitation of σ and χ phase in Type 316FR welds (two solidification modes) • Different precipitation behaviors: precipitation initiation time and growth speed • Johnson-Mehl–type equation is the most applicable to the precipitation behaviors • Precipitation behaviors are predicted under service conditions of FBRs

  11. Effects of Short-Term Warming and Altered Precipitation on Soil Microbial Communities in Alpine Grassland of the Tibetan Plateau

    Science.gov (United States)

    Zhang, Kaoping; Shi, Yu; Jing, Xin; He, Jin-Sheng; Sun, Ruibo; Yang, Yunfeng; Shade, Ashley; Chu, Haiyan

    2016-01-01

    Soil microbial communities are influenced by climate change drivers such as warming and altered precipitation. These changes create abiotic stresses, including desiccation and nutrient limitation, which act on microbes. However, our understanding of the responses of microbial communities to co-occurring climate change drivers is limited. We surveyed soil bacterial and fungal diversity and composition after a 1-year warming and altered precipitation manipulation in the Tibetan plateau alpine grassland. In isolation, warming and decreased precipitation treatments each had no significant effects on soil bacterial community structure; however, in combination of both treatments altered bacterial community structure (p = 0.03). The main effect of altered precipitation specifically impacted the relative abundances of Bacteroidetes and Gammaproteobacteria compared to the control, while the main effect of warming impacted the relative abundance of Betaproteobacteria. In contrast, the fungal community had no significant response to the treatments after 1-year. Using structural equation modeling (SEM), we found bacterial community composition was positively related to soil moisture. Our results indicate that short-term climate change could cause changes in soil bacterial community through taxonomic shifts. Our work provides new insights into immediate soil microbial responses to short-term stressors acting on an ecosystem that is particularly sensitive to global climate change. PMID:27446064

  12. Uranium Biomineralization As a Result of Bacterial Phosphatase Activity: Insights From Bacterial Isolates From a Contaminated Subsurface

    International Nuclear Information System (INIS)

    Uranium contamination is an environmental concern at the Department of Energy's Field Research Center in Oak Ridge, Tennessee. In this study, we investigated whether phosphate biomineralization, or the aerobic precipitation of U(VI)-phosphate phases facilitated by the enzymatic activities of microorganisms, offers an alternative to the more extensively studied anaerobic U(VI) bioreduction. Three heterotrophic bacteria isolated from FRC soils were studied for their ability to grow and liberate phosphate in the presence of U(VI) and an organophosphate between pH 4.5 and 7.0. The objectives were to determine whether the strains hydrolyzed sufficient phosphate to precipitate uranium, to determine whether low pH might have an effect on U(VI) precipitation, and to identify the uranium solid phase formed during biomineralization. Two bacterial strains hydrolyzed sufficient organophosphate to precipitate 73-95% total uranium after 120 h of incubation in simulated groundwater. The highest rates of uranium precipitation and phosphatase activity were observed between pH 5.0 and 7.0. EXAFS spectra identified the uranyl phosphate precipitate as an autunite/meta-autunite group mineral. The results of this study indicate that aerobic heterotrophic bacteria within a uranium-contaminated environment that can hydrolyze organophosphate, especially in low pH conditions, may play an important role in the bioremediation of uranium

  13. Heme uptake in bacterial pathogens

    OpenAIRE

    Contreras, Heidi; Chim, Nicholas; Credali, Alfredo; Goulding, Celia W.

    2014-01-01

    Iron is an essential nutrient for the survival of organisms. Bacterial pathogens possess specialized pathways to acquire heme from their human hosts. In this review, we present recent structural and biochemical data that provide mechanistic insights into several bacterial heme uptake pathways, encompassing the sequestration of heme from human hemoproteins to secreted or membrane-associated bacterial proteins, the transport of heme across bacterial membranes, and the degradation of heme within...

  14. A Global View of Large-Scale Precipitation Variability.

    Science.gov (United States)

    Rasmusson, Eugene M.; Arkin, Phillip A.

    1993-08-01

    Observational studies and model experiments make abundantly clear the need for a global perspective in order to understand the nature and causes of persistent regional precipitation anomalies. Rainfall in the deep tropics is particularly important as a forcing mechanism for the atmosphere's large-scale circulation and climate. Analysis of systematic space-based observations and surface marine data over the past three decades has vastly improved our understanding of tropical convective regimes and their relationship to surface conditions. The characteristics of the annual cycle of tropical convection and its relationship to sea surface temperature field and the general circulation of the tropics are reviewed. The hierarchal nature of tropical precipitation variability on time/space scales ranging from synoptic cloud clusters through the intraseasonal Madden-Julian Oscillation to multiyear El Niño-Southern Oscillation cycle is discussed. Links between tropical convection and extratropical precipitation on time scales ranging from synoptic to multiyear are examined, with emphasis on conditions over the North Pacific-North American sector during winter.Precipitation variability over a number of regions bordering the Atlantic basin are related to Atlantic sector modes of SST and circulation variability. Systematic modes of Atlantic variability and their relationship to regional precipitation variability are described with emphasis on the tropics.Changes in landscape characteristics (vegetative cover, soil moisture, surface roughness), whether natural or human induced, result in changes in the surface radiation balance and the fluxes of heat and moisture. Our current understanding of the role of land surface processes in sustaining or intensifying anomalous precipitation regimes is briefly discussed. Identification of an anthropogenic trend in the presence of decadal-scale natural variations in precipitation is a formidable challenge. Three examples of large

  15. Precipitation kinetics of a continuous precipitator, with application to the precipitation of ammonium polyuranate

    International Nuclear Information System (INIS)

    A mathematical model describing the kinetics of continuous precipitation was developed which accounts for crystal nucleation, crystal growth, primary coagulation, and secondary coagulation. Population density distributions, average particle sizes, dominant particle sizes, and suspension density fractions of the crystallites, primary agglomerates, and secondary agglomerates leaving the continuous precipitator can be determined. This kinetic model was applied to the continuous precipitation of ammonium polyuranate, which consists of: (1) elementary crystals, (2) clusters or primary coagulated particles, and (3) agglomerates or secondary coagulated particles. The crystallites are thin, submicron, hexagonal platelets. The clusters had an upper size limit of about 7 μ in diameter and contained numerous small voids (less than 0.3 μm) due to the packing of the crystallites. The agglomerates had an upper size limit of about 40 μm in diameter and contained large voids (approximately 1 μm). The particle size distribution and particle structure of the ammonium polyuranate precipitate can be controlled through proper regulation of the precipitation conditions. The ratio of clusters to agglomerates can be best controlled through the uranium concentration, and the cohesiveness or internal bonding strength of the particles can be controlled with the ammonium to uranium reacting feed mole ratio. These two conditions, in conjunction with the residence time, will determine the nucleation rates, growth rates, and size distributions of the particles leaving the continuous precipitator. With proper control of these physical particle characteristics, the use of pore formers, ball-milling, and powder blending can probably be eliminated from the nuclear fuel fabrication process, substantially reducing the cost

  16. Classroom Exercises Utilizing Precipitation Data.

    Science.gov (United States)

    Kohler, Fred

    Precipitation data for Macomb (Illinois) for the period 1912-1981 were the bases for developing classroom exercises that offered college students experience in collecting such data. After students collected the data, they reduced them to manageable proportions, and then examined average long-term relations which may have emerged among yearly,…

  17. Extreme precipitation: Increases all round

    Science.gov (United States)

    Ingram, William

    2016-05-01

    Globally, extreme rainfall is expected to increase with warming, but regional changes over land have been less certain. Now research shows that this intense precipitation has increased across both the wetter and the drier parts of the continents, and will continue to do so as global warming continues.

  18. Electrostatic Precipitator (ESP) TRAINING MANUAL

    Science.gov (United States)

    The manual assists engineers in using a computer program, the ESPVI 4.0W, that models all elements of an electrostatic precipitator (ESP). The program is a product of the Electric Power Research Institute and runs in the Windows environment. Once an ESP is accurately modeled, the...

  19. Proton dynamics in bacterial spores, a neutron scattering investigation

    Directory of Open Access Journals (Sweden)

    Noue Alexandre Colas de la

    2015-01-01

    Full Text Available Results from first neutron scattering experiments on bacterial spores are reported. The elastic intensities and mean square displacements have a non-linear behaviour as function of temperature, which is in agreement with a model presenting more pronounced variations at around 330 K (57 ∘C and 400 K (127 ∘C. Based on the available literature on thermal properties of bacterial spores, mainly referring to differential scanning calorimetry, they are suggested to be associated to main endothermic transitions induced by coat and/or core bacterial response to heat treatment.

  20. Proton dynamics in bacterial spores, a neutron scattering investigation

    Science.gov (United States)

    Colas de la Noue, Alexandre; Peters, Judith; Gervais, Patrick; Martinez, Nicolas; Perrier-Cornet, Jean-Marie; Natali, Francesca

    2015-01-01

    Results from first neutron scattering experiments on bacterial spores are reported. The elastic intensities and mean square displacements have a non-linear behaviour as function of temperature, which is in agreement with a model presenting more pronounced variations at around 330 K (57 ∘C) and 400 K (127 ∘C). Based on the available literature on thermal properties of bacterial spores, mainly referring to differential scanning calorimetry, they are suggested to be associated to main endothermic transitions induced by coat and/or core bacterial response to heat treatment.

  1. Conditional Generation of Monthly Precipitation

    Science.gov (United States)

    Kim, U.; Kaluarachchi, J. J.

    2006-12-01

    Monthly precipitation models can be used in basin-wide modeling to develop long-term strategies for water resources planning and management and to estimate the change of water yield due to climate change. Such precipitation models are especially important for effective management of river basins in developing countries such as the upper Blue Nile River basin of Ethiopia where the water resource utilization is limited. Many studies have been previously performed to preserve historical temporal and spatial structures when generating precipitation series. The main focus of those studies was to preserve the historical statistics. Other important factors to be considered are transition and spatial correlations. A few recent studies attempted to preserve transition as well as the statistics of historical record. These studies provided satisfactory results while showing the difficulty and complexity of computations in their methods. The conditional generation method (CGM) that can preserve both historical temporal and spatial structures is presented in this study. Because the CGM is driven from the historical conditional probabilities occurring given amounts of precipitation between two successive months or two stations, it is computationally simple and reliable, i.e., parameterization, inverse matrix, or optimum band width is not required. The CGM was applied to reproducing the precipitation pattern of the upper Blue Nile River basin in Ethiopia using monthly precipitation data of 10 stations to demonstrate its applicability. Comparing to the method of inverse transformation of cumulative distribution functions of the gamma distribution and nonparametric kernel estimator with variable band width selected from the goodness-of-fit tests, the CGM showed improved performance, especially in representing the transition characteristics. The CGM also generated the historical spatial correlations between the stations with acceptable accuracy. The results suggested that the CGM

  2. Evolutionary transitions in bacterial symbiosis

    OpenAIRE

    Sachs, Joel L.; Skophammer, Ryan G.; Regus, John U.

    2011-01-01

    Diverse bacterial lineages form beneficial infections with eukaryotic hosts. The origins, evolution, and breakdown of these mutualisms represent important evolutionary transitions. To examine these key events, we synthesize data from diverse interactions between bacteria and eukaryote hosts. Five evolutionary transitions are investigated, including the origins of bacterial associations with eukaryotes, the origins and subsequent stable maintenance of bacterial mutualism with hosts, the captur...

  3. Emerging trends in heavy precipitation and hot temperature extremes in Switzerland

    Science.gov (United States)

    Scherrer, S. C.; Fischer, E. M.; Posselt, R.; Liniger, M. A.; Croci-Maspoli, M.; Knutti, R.

    2016-03-01

    Changes in intensity and frequency of daily heavy precipitation and hot temperature extremes are analyzed in Swiss observations for the years 1901-2014/2015. A spatial pooling of temperature and precipitation stations is applied to analyze the emergence of trends. Over 90% of the series show increases in heavy precipitation intensity, expressed as annual maximum daily precipitation (mean change: +10.4% 100 years-1; 31% significant, p change: +26.5% 100 years-1; 35% significant, p climate model projections, with theoretical understanding of a human-induced change in the energy budget and water cycle and with detection and attribution studies of extremes on larger scales.

  4. Bacterial Acclimation Inside an Aqueous Battery.

    Directory of Open Access Journals (Sweden)

    Dexian Dong

    Full Text Available Specific environmental stresses may lead to induced genomic instability in bacteria, generating beneficial mutants and potentially accelerating the breeding of industrial microorganisms. The environmental stresses inside the aqueous battery may be derived from such conditions as ion shuttle, pH gradient, free radical reaction and electric field. In most industrial and medical applications, electric fields and direct currents are used to kill bacteria and yeast. However, the present study focused on increasing bacterial survival inside an operating battery. Using a bacterial acclimation strategy, both Escherichia coli and Bacillus subtilis were acclimated for 10 battery operation cycles and survived in the battery for over 3 days. The acclimated bacteria changed in cell shape, growth rate and colony color. Further analysis indicated that electrolyte concentration could be one of the major factors determining bacterial survival inside an aqueous battery. The acclimation process significantly improved the viability of both bacteria E. coli and B. subtilis. The viability of acclimated strains was not affected under battery cycle conditions of 0.18-0.80 mA cm(-2 and 1.4-2.1 V. Bacterial addition within 1.0×10(10 cells mL(-1 did not significantly affect battery performance. Because the environmental stress inside the aqueous battery is specific, the use of this battery acclimation strategy may be of great potential for the breeding of industrial microorganisms.

  5. [Bacterial diseases of rape].

    Science.gov (United States)

    Zakharova, O M; Mel'nychuk, M D; Dankevych, L A; Patyka, V P

    2012-01-01

    Bacterial destruction of the culture was described and its agents identified in the spring and winter rape crops. Typical symptoms are the following: browning of stem tissue and its mucilagization, chlorosis of leaves, yellowing and beginning of soft rot in the place of leaf stalks affixion to stems, loss of pigmentation (violet). Pathogenic properties of the collection strains and morphological, cultural, physiological, and biochemical properties of the agents of rape's bacterial diseases isolated by the authors have been investigated. It was found that all the isolates selected by the authors are highly or moderately aggressive towards different varieties of rape. According to the complex of phenotypic properties 44% of the total number of isolates selected by the authors are related to representatives of the genus Pseudomonas, 37% - to Xanthomonas and 19% - to Pectobacterium. PMID:23293826

  6. Bacterial proteases and virulence

    DEFF Research Database (Denmark)

    Frees, Dorte; Brøndsted, Lone; Ingmer, Hanne

    Bacterial pathogens rely on proteolysis for variety of purposes during the infection process. In the cytosol, the main proteolytic players are the conserved Clp and Lon proteases that directly contribute to virulence through the timely degradation of virulence regulators and indirectly by providing...... tolerance to adverse conditions such as those experienced in the host. In the membrane, HtrA performs similar functions whereas the extracellular proteases, in close contact with host components, pave the way for spreading infections by degrading host matrix components or interfering with host cell...... cell. These extracellular proteases are activated in complex cascades involving auto-processing and proteolytic maturation. Thus, proteolysis has been adopted by bacterial pathogens at multiple levels to ensure the success of the pathogen in contact with the human host....

  7. Mesoscale modeling of solute precipitation and radiation damage

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Yongfeng [Idaho National Lab. (INL), Idaho Falls, ID (United States); Schwen, Daniel [Idaho National Lab. (INL), Idaho Falls, ID (United States); Ke, Huibin [Idaho National Lab. (INL), Idaho Falls, ID (United States); Univ. of Wisconsin, Madison, WI (United States); Bai, Xianming [Idaho National Lab. (INL), Idaho Falls, ID (United States); Hales, Jason [Idaho National Lab. (INL), Idaho Falls, ID (United States)

    2015-09-01

    This report summarizes the low length scale effort during FY 2014 in developing mesoscale capabilities for microstructure evolution in reactor pressure vessels. During operation, reactor pressure vessels are subject to hardening and embrittlement caused by irradiation-induced defect accumulation and irradiation-enhanced solute precipitation. Both defect production and solute precipitation start from the atomic scale, and manifest their eventual effects as degradation in engineering-scale properties. To predict the property degradation, multiscale modeling and simulation are needed to deal with the microstructure evolution, and to link the microstructure feature to material properties. In this report, the development of mesoscale capabilities for defect accumulation and solute precipitation are summarized. Atomic-scale efforts that supply information for the mesoscale capabilities are also included.

  8. Supramolecular bacterial systems

    OpenAIRE

    Sankaran, Shrikrishnan

    2015-01-01

    For nearly over a decade, a wide variety of dynamic and responsive supramolecular architectures have been investigated and developed to address biological systems. Since the non-covalent interactions between individual molecular components in such architectures are similar to the interactions found in living systems, it was possible to integrate chemically-synthesized and naturally-occurring components to create platforms with interesting bioactive properties. Bacterial cells and recombinant ...

  9. Bacterial transformation of terpenoids

    International Nuclear Information System (INIS)

    Data on the bacterial transformation of terpenoids published in the literature in the past decade are analyzed. Possible pathways for chemo-, regio- and stereoselective modifications of terpenoids are discussed. Considerable attention is given to new technological approaches to the synthesis of terpenoid derivatives suitable for the use in the perfume and food industry and promising as drugs and chiral intermediates for fine organic synthesis. The bibliography includes 246 references

  10. Discrete Cues Paired with Naloxone-Precipitated Withdrawal from Acute Morphine Dependence Elicit Conditioned Withdrawal Responses

    OpenAIRE

    Amitai, Nurith; Liu, Jian; Schulteis, Gery

    2006-01-01

    Acute bolus doses of morphine induce a state of acute opioid dependence as measured by naloxone-precipitated withdrawal. Repeated morphine and precipitated withdrawal experience further enhances naloxone-induced withdrawal severity, in part due to direct neuroadaptation to repeated morphine, and in part due to conditioned associations of context and withdrawal experience. To determine whether a discrete tone/light conditioned stimulus (CS) could elicit conditioned withdrawal responses in acut...

  11. Aerosol-Cloud-Precipitation Interactions in WRF Model:Sensitivity to Autoconversion Parameterization

    Institute of Scientific and Technical Information of China (English)

    解小宁; 刘晓东

    2015-01-01

    Cloud-to-rain autoconversion process is an important player in aerosol loading, cloud morphology, and precipitation variations because it can modulate cloud microphysical characteristics depending on the par-ticipation of aerosols, and aff ects the spatio-temporal distribution and total amount of precipitation. By applying the Kessler, the Khairoutdinov-Kogan (KK), and the Dispersion autoconversion parameterization schemes in a set of sensitivity experiments, the indirect eff ects of aerosols on clouds and precipitation are investigated for a deep convective cloud system in Beijing under various aerosol concentration backgrounds from 50 to 10000 cm−3. Numerical experiments show that aerosol-induced precipitation change is strongly dependent on autoconversion parameterization schemes. For the Kessler scheme, the average cumulative precipitation is enhanced slightly with increasing aerosols, whereas surface precipitation is reduced signifi-cantly with increasing aerosols for the KK scheme. Moreover, precipitation varies non-monotonically for the Dispersion scheme, increasing with aerosols at lower concentrations and decreasing at higher concentrations. These diff erent trends of aerosol-induced precipitation change are mainly ascribed to diff erences in rain wa-ter content under these three autoconversion parameterization schemes. Therefore, this study suggests that accurate parameterization of cloud microphysical processes, particularly the cloud-to-rain autoconversion process, is needed for improving the scientifi c understanding of aerosol-cloud-precipitation interactions.

  12. Precipitation model in microalloyed steels both isothermal and continuous cooling conditions

    Energy Technology Data Exchange (ETDEWEB)

    Medina, S. F.; Quispe, A.; Gomez, M.

    2015-07-01

    Niobium and vanadium precipitates (nitrides and carbides) can inhibit the static recrystallization of austenite but this does not happen for Ti, which form nitrides at high temperatures. RPTT diagrams show the interaction between recrystallization and precipitation allowing study the strain induced precipitation kinetics and precipitate coarsening. Based on Dutta and Sellars expression for the start of strain-induced precipitation in microalloyed steels, a new model has been constructed which takes into account the influence of variables such as microalloying element percentages, strain, temperature, strain rate and grain size. Recrystallization- Precipitation-Time-Temperature (RPTT) diagrams have been plotted thanks to a new experimental study carried out by means of hot torsion tests on approximately twenty microalloyed steels with different Nb, V and Ti contents. Mathematical analysis of the results recommends the modification of some parameters such as the supersaturation ratio (ks) and constant B, which is no longer a constant but a function of ks. The expressions are now more consistent and predict the Precipitation-Time-Temperature (PTT) curves with remarkable accuracy. The model for strain-induced precipitation kinetics is completed by means of Avramis equation. Finally, the model constructed in isothermal testing conditions, it has been converted to continuous cooling conditions in order to apply it in hot rolling. (Author)

  13. Precipitation Extremes: Considerations for Anthropogenically-forced Future Changes

    Science.gov (United States)

    Kunkel, K.; Young, J.

    2015-12-01

    The Third National Climate Assessment states that "increases in the frequency and intensity of extreme precipitation events are projected for all U.S. regions". While that general statement was made with high confidence, the practical implications for decision-makers are much less clear. In particular, engineering design needs quantitative estimates of probable maximum precipitation (PMP) and intensity-duration-frequency (IDF) values for the future in order to optimize runoff control structures for future climate conditions. This can be realized by simply analyzing the precipitation data from global climate model simulations of the future. However, confidence in the resulting values suffers from the known issues with GCM simulation of precipitation. In addition, skepticism about the accuracy of climate models negatively affects potential adoption of revised values in the engineering design community. We contend that scientists need a multi-pronged approach to develop PMP/IDF values that can be defended, explained, and promoted in order to maximize societal benefits and avoid catastrophic events. This talk will discuss considerations that could/should form the basis for design values. While global-warming induced increases in atmospheric water vapor content are nearly certain and form the foundation for expected increases in extreme precipitation, they most likely will be modulated by changes in global atmospheric dynamics and the consequent effects on local weather system climatology. This can be seen currently in the unexplained regional variations in recent trends in extreme precipitation frequency and intensity. We need to be able to understand recent trends, when greenhouse gas forcing of the climate systems has been rapidly increasing, in order to produce confident projections of future extreme precipitation.

  14. Isotopic composition of past precipitation

    International Nuclear Information System (INIS)

    The distribution of stable isotopes in precipitation provides critical quantitative information about the global water cycle. The first PAGES/IAEA ISOMAP workshop was held at the IAEA headquarters in Vienna, 24-26 August 1998, which gathered 32 participants. The presentation and discussions demonstrated that a high level of sophistication already exists in the development of transfer functions between measured parameters and precipitation, as a result of the extensive use of water isotope tracers in paleo-environmental investigations, but a major challenge facing both producers and users of paleo-isotope data is the effective management of data and meta-data, to permit ready retrieval of raw and inferred data for comparison and reinterpretation. This will be in important goal of future ISOMAP activities. The critical need for more paleo-data from low latitudes was clearly recognized

  15. Protein recovery from surfactant precipitation.

    Science.gov (United States)

    Cheng, Shu Ian; Stuckey, David C

    2011-01-01

    The recovery of lysozyme from an aqueous solution containing precipitated lysozyme-AOT complexes formed by the direct addition of sodium bis-(2-ethylhexyl) sulfosuccinate (AOT) to a lysozyme solution was studied using both solvents, and a counterionic surfactant. Ethanol,methanol and solvent mixtures dissolved the surfactant precipitate and recovered lysozyme as a solid. Recovery efficiency and protein stability varied with the type of solvent used. An entirely different method of recovery was also evaluated using a counterionic surfactant: tri-octylmethylammonium chloride (TOMAC) which bound to AOT releasing lysozyme into solution.Complete recovery (100%) of lysozyme was achieved at a molar ratio of 2:1(TOMAC:AOT), and the original protein activity was maintained in the final aqueous phase.The recovered lysozyme retained its secondary structure as observed in circular dichroism(CD) spectra. Specific activity studies show that counterionic surfactant extraction does not alter the biological activity of the enzyme. PMID:22235487

  16. Microphysical controls on the isotopic composition of wintertime orographic precipitation

    Science.gov (United States)

    Moore, M.; Blossey, P. N.; Muhlbauer, A.; Kuang, Z.

    2016-06-01

    The sensitivity of mixed-phase orographic clouds, precipitation, and their isotopic content to changes in dynamics, thermodynamics, and microphysics is explored in idealized two-dimensional flow over a mountain barrier. These simulations use the Weather Research and Forecasting (WRF) model with stable water isotopologues (HDO and H218O), which have been integrated into the Thompson microphysics scheme within WRF as part of the present project. In order to understand how the isotopic composition of precipitation (δ18Oprecip) is fixed, the mountain height, temperature, and the prescribed cloud droplet number concentration (CDNC) have been varied in a series of simulations. For the given range of values explored in this work, changes in mountain height and temperature induce stronger responses in domain-averaged δ18Oprecip than do changes in CDNC by a factor of approximately 10. The strongest response to changing CDNC leads to local variations of δ18Oprecip of about 3‰, though those occur in regions of weak precipitation (cloud liquid and vapor deposition onto snow, the leading sources of precipitation in these simulations. The changes in δ18Oprecip with mountain height, temperature, and CDNC are governed in part by the microphysical pathways through which precipitating hydrometeors are formed and grow.

  17. An underestimated role of precipitation frequency in regulating summer soil moisture

    International Nuclear Information System (INIS)

    Soil moisture induced droughts are expected to become more frequent under future global climate change. Precipitation has been previously assumed to be mainly responsible for variability in summer soil moisture. However, little is known about the impacts of precipitation frequency on summer soil moisture, either interannually or spatially. To better understand the temporal and spatial drivers of summer drought, 415 site yr measurements observed at 75 flux sites world wide were used to analyze the temporal and spatial relationships between summer soil water content (SWC) and the precipitation frequencies at various temporal scales, i.e., from half-hourly, 3, 6, 12 and 24 h measurements. Summer precipitation was found to be an indicator of interannual SWC variability with r of 0.49 (p < 0.001) for the overall dataset. However, interannual variability in summer SWC was also significantly correlated with the five precipitation frequencies and the sub-daily precipitation frequencies seemed to explain the interannual SWC variability better than the total of precipitation. Spatially, all these precipitation frequencies were better indicators of summer SWC than precipitation totals, but these better performances were only observed in non-forest ecosystems. Our results demonstrate that precipitation frequency may play an important role in regulating both interannual and spatial variations of summer SWC, which has probably been overlooked or underestimated. However, the spatial interpretation should carefully consider other factors, such as the plant functional types and soil characteristics of diverse ecoregions. (letter)

  18. Trace element and stable isotope data from a flowstone in a natural cave of the mining district of SW Sardinia (Italy: evidence for Zn2+-induced aragonite precipitation in comparatively wet climatic conditions

    Directory of Open Access Journals (Sweden)

    Caddeo Guglielmo Angelo

    2011-07-01

    Full Text Available A speleothem from Crovassa Azzurra, a mine cave in SW Sardinia (Italy, has been analysed for mineralogy, minor and traceelements and stable isotopes. It is composed of layers of primary calcite and aragonite, with a region of secondary calcite. The primarycarbonate is strikingly rich in Zn and Pb, presumably as the result of transport in solution from overlying Pb-Zn deposits. Immediatelybelow the transition between calcite and aragonite, concentrations of Zn, Cd and P increase. At the transition between aragonite andPb-rich aragonite, concentrations of Pb and P increase. Stable isotopes do not indicate an evolution toward drier periods for thesetwo transitions, conversely to what is normally observed in calcite-aragonite speleothems. On the contrary the combined observationof increase in P and metals derived from oxidation of sulphides and the variation of isotopic composition of aragonite and calcitesuggests that in this mine cave aragonite was deposited with increasing flowrate and thus more humid conditions. In addition, theeffect of Zn2+ or Pb2+ in inhibiting precipitation of calcite appears to have been more important than that of Mg2+.

  19. Can Mg isotopes be used to trace cyanobacteria-mediated magnesium carbonate precipitation in alkaline lakes?

    Science.gov (United States)

    Shirokova, L. S.; Mavromatis, V.; Bundeleva, I.; Pokrovsky, O. S.; Bénézeth, P.; Pearce, C.; Gérard, E.; Balor, S.; Oelkers, E. H.

    2011-07-01

    The fractionation of Mg isotopes was determined during the cyanobacterial mediated precipitation of hydrous magnesium carbonate precipitation in both natural environments and in the laboratory. Natural samples were obtained from Lake Salda (SE Turkey), one of the few modern environments on the Earth's surface where hydrous Mg-carbonates are the dominant precipitating minerals. This precipitation was associated with cyanobacterial stromatolites which were abundant in this aquatic ecosystem. Mg isotope analyses were performed on samples of incoming streams, groundwaters, lake waters, stromatolites, and hydromagnesite-rich sediments. Laboratory Mg carbonate precipitation experiments were conducted in the presence of purified Synechococcus sp cyanobacteria that were isolated from the lake water and stromatolites. The hydrous magnesium carbonates nesquehonite (MgCO3·3H2O) and dypingite (Mg5(CO3)4(OH)25(H2O)) were precipitated in these batch reactor experiments from aqueous solutions containing either synthetic NaHCO3/MgCl2 mixtures or natural Lake Salda water, in the presence and absence of live photosynthesizing Synechococcus sp. Bulk precipitation rates were not to affected by the presence of bacteria when air was bubbled through the system. In the stirred non-bubbled reactors, conditions similar to natural settings, bacterial photosynthesis provoked nesquehonite precipitation, whilst no precipitation occurred in bacteria-free systems in the absence of air bubbling, despite the fluids achieving a similar or higher degree of supersaturation. The extent of Mg isotope fractionation (Δ26Mgsolid-solution) between the mineral and solution in the abiotic experiments was found to be identical, within uncertainty, to that measured in cyanobacteria-bearing experiments, and ranges from -1.4 to -0.7 ‰. This similarity refutes the use of Mg isotopes to validate microbial mediated precipitation of hydrous Mg carbonates.

  20. Microhabitat heterogeneity across leaves and flower organs promotes bacterial diversity.

    Science.gov (United States)

    Junker, Robert R; Keller, Alexander

    2015-09-01

    Eukaryote-associated microbiomes interact with their hosts in multiple manners, thereby affecting the hosts' phenotype, physical condition and behaviour. In plants, bacteria have numerous functions, with variable net effects, both in natural and agricultural systems. However, information about the composition and diversity of the bacterial communities associated with different aboveground plant organs, particularly flowers, is lacking. In addition, the relative effects of microhabitat and environmental conditions on community establishment require further attention. Here, using culture-independent methods, we determine that leaves and three floral microhabitats (nectar, stamina and styles) of Metrosideros polymorpha (Myrtaceae), a tree endemic to Hawai'i, host unique indicator communities composed of relatively abundant bacterial taxa. These indicator communities are accompanied by a large number of ubiquitous or rare bacteria with lower abundances. In our study system, the strong effect of microhabitat filtering on plant-associated community composition and bacterial richness and diversity strongly exceeds the influence of environmental effects such as precipitation, altitude, substrate age and geographic distance. Thus, the bacterial richness of aboveground plant organs is strongly underestimated when only one microhabitat, e.g. leaves, is considered. Our study represents a first step towards a comprehensive characterization of the distribution, composition and underlying factors, of plant bacterial communities, with implications for future basic and applied research on plant health, pollination and reproduction. PMID:26253507