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Sample records for bacterial sulfate reduction

  1. Controls on stable sulfur isotope fractionation during bacterial sulfate reduction in Arctic sediments

    DEFF Research Database (Denmark)

    Bruchert, V.; Knoblauch, C.; Jørgensen, BB

    2001-01-01

    Sulfur isotope fractionation experiments during bacterial sulfate reduction were performed with recently isolated strains of cold-adapted sulfate-reducing bacteria from Arctic marine sediments with year-round temperatures below 2 degreesC. The bacteria represent quantitatively important members...... parts per thousand and 8 parts per thousand above 25 degreesC, respectively. In absence of significant differences in sulfate reduction rates in the high and low temperature range, respectively, we infer that different genera of sulfate-reducing bacteria dominate the sulfate-reducing bacterial community...

  2. Bacterial sulfate reduction in hydrothermal sediments of the Guaymas Basin, Gulf of California, Mexico

    DEFF Research Database (Denmark)

    Weber, A.; Jørgensen, BB

    2002-01-01

    Depth distribution and temperature dependence of bacterial sulfate reduction were studied in hydrothermal surface sediments of the southern trough of the Guaymas Basin at 2000 m water depth. In situ temperatures ranged from 2.8 degreesC at the sediment surface to > 130degreesC at 30 cm depth in t...

  3. Comparative Study of Soluble Sulfate Reduction by Bacterial Consortia from Varied Regions of India

    Directory of Open Access Journals (Sweden)

    Poonam Nasipuri

    2010-01-01

    Full Text Available Soluble sulfate contamination in water is observed due to various industrial activities. Chemical means of reduction are available yet the biological approach is the preferred one. Problem statement: The problem addressed in this study was the isolation of efficient sulfate reducing bacterial consortia for bioremediation of soluble sulfate from mining effluent. Approach: The culture based method using the DSMZ specific media were used for isolation of sulfate reducing bacterial consortia. Their reduction efficiency was measured spectrophotometrically following growth under varied temperature and pH in specified media as well as in effluent water. The microbial consortia were analyzed at the 16SrDNA level to identify the members. The completeness as well as richness of the study was analyzed using OTU saturation curve, Shannon diversity index and equitability index. Results: All the eight consortia were able to tolerate vide range of pH (6-9 and temperature (20-40°C. They could reduce 63-99% of soluble sulfate (~2000 ppm in 48 h. Conclusion: This study reported about the enrichment of few of the most efficient anaerobic microbial consortia that could be employed for environmental soluble sulfate reduction under diverse pH and temperature conditions.

  4. Regulation of bacterial sulfate reduction and hydrogen sulfide fluxes in the central Namibian coastal upwelling zone

    DEFF Research Database (Denmark)

    Bruchert, V.; Jørgensen, BB; Neumann, K.;

    2003-01-01

    and the low capacity to oxidize and trap sulfide. The inner shelf break marks the seaward border of sulfidic bottom waters, and separates two different regimes of bacterial sulfate reduction. In the sulfidic bottom waters on the shelf, up to 55% of sulfide oxidation is mediated by the large nitrate...... to the sediment-water interface and reduce the hydrogen sulfide flux to the water column. Modeling of pore water sulfide concentration profiles indicates that sulfide produced by bacterial sulfate reduction in the uppermost 16 cm of sediment is sufficient to account for the total flux of hydrogen sulfide...... to the water column. However, the total pool of hydrogen sulfide in the water column is too large to be explained by steady state diffusion across the sediment-water interface. Episodic advection of hydrogen sulfide, possibly triggered by methane eruptions, may contribute to hydrogen sulfide in the water...

  5. Temperature characteristics of bacterial sulfate reduction in continental shelf and slope sediments

    Directory of Open Access Journals (Sweden)

    J. E. Sawicka

    2012-08-01

    Full Text Available The temperature responses of sulfate-reducing microbial communities were used as community temperature characteristics for their in situ temperature adaptation, their origin, and dispersal in the deep sea. Sediments were collected from a suite of coastal, continental shelf, and slope sediments from the southwest and southeast Atlantic and permanently cold Arctic fjords from water depths ranging from the intertidal zone to 4327 m. In situ temperatures ranged from 8 °C on the shelf to −1 °C in the Arctic. Temperature characteristics of the active sulfate-reducing community were determined in short-term incubations with 35S-sulfate in a temperature gradient block spanning a temperature range from 0 to 40 °C. An optimum temperature (Topt between 27 °C and 30 °C for the South Atlantic shelf sediments and for the intertidal flat sediment from Svalbard was indicative of a psychrotolerant/mesophilic sulfate-reducing community, whereas Topt ≤20 °C in South Atlantic slope and Arctic shelf sediments suggested a predominantly psychrophilic community. High sulfate reduction rates (20–50% at in situ temperatures compared to those at Topt further support this interpretation and point to the importance of the ambient temperature regime for regulating the short-term temperature response of sulfate-reducing communities. A number of cold (<4 °C continental slope sediments showed broad temperature optima reaching as high as 30 °C, suggesting the additional presence of apparently mesophilic sulfate-reducing bacteria. Since the temperature characteristics of these mesophiles do not fit with the permanently cold deep-sea environment, we suggest that these mesophilic microorganisms are of allochthonous origin and transported to this site. It is likely that they were deposited along with the mass-flow movement of warmer shelf-derived sediment. These data therefore suggest that temperature

  6. Temperature characteristics of bacterial sulfate reduction in continental shelf and slope sediments

    Directory of Open Access Journals (Sweden)

    J. E. Sawicka

    2012-01-01

    Full Text Available The temperature responses of sulfate-reducing microbial communities were used as fingerprints for their in situ temperature adaptation, their origin, and dispersal in the deep-sea. Sediments were collected from a suite of coastal, continental shelf, and slope sediments from the southwest and southeast Atlantic and permanently cold Arctic fjords from water depths ranging from the intertidal zone to 4327 m. In situ temperatures ranged from 8 °C on the shelf to 1 °C on the lower slope and in the Arctic. Temperature characteristics of the active sulfate-reducing community were determined in short-term incubations with 35S-sulfate in a temperature gradient block spanning a temperature range from 0 to 40 °C. An optimum temperature (Topt between 27 °C and 30 °C for the South Atlantic shelf sediments and for the intertidal flat sediment from Svalbard was indicative of a psychrotolerant/mesophilic sulfate-reducing community, whereas Topt ≤ 20 °C in South Atlantic slope and Arctic shelf sediments suggested a predominantly psychrophilic community. High sulfate reduction rates (20–50% at in-situ temperatures compared to those at Topt further support this interpretation, and point to the importance of the ambient temperature regime for regulating the short-term temperature response of sulfate-reducing communities. A number of cold (<4 °C continental slope sediments showed broad temperature optima reaching as high as 30 °C suggesting the additional presence of apparently mesophilic sulfate-reducing bacteria. Since the temperature characteristics of these mesophiles do not fit with the permanently cold deep-sea environment, we suggest that these mesophilic microorganisms are of allochthonous origin and transported to this site. It is likely that they were deposited along with the mass-flow movement of warmer shelf-derived sediment. These data therefore suggest that temperature

  7. Sulfur isotope fractionation during bacterial sulfate reduction in organic-rich sediments

    DEFF Research Database (Denmark)

    Habicht, K S; Canfield, D E

    1997-01-01

    Isotope fractionation during sulfate reduction by natural populations of sulfate-reducing bacteria was investigated in the cyanobacterial microbial mats of Solar Lake, Sinai and the sediments of Logten Lagoon sulfuretum, Denmark. Fractionation was measured at different sediment depths, sulfate...... concentrations, and incubation temperatures. Rates of sulfate reduction varied between 0.1 and 37 micromoles cm-3 d-1, with the highest rates among the highest ever reported from natural sediments. The depletion of 34S during dissimilatory sulfate reduction ranged from 16% to 42%, with the largest 34S...... sulfate reduction. Therefore, additional processes contributing to the fractionation of sulfur isotopes in the sediments are indicated. From both Solar Lake and Logten Lagoon we were able to enrich cultures of elemental sulfur-disproportionating bacteria. We suggest that isotope fractionation accompanying...

  8. Antiquity and evolutionary status of bacterial sulfate reduction: sulfur isotope evidence.

    Science.gov (United States)

    Schidlowski, M

    1979-09-01

    The presently available sedimentary sulfur isotope record for the Precambrian seems to allow the following conclusions: (1) In the Early Archaean, sedimentary delta 34S patterns attributable to bacteriogenic sulfate reduction are generally absent. In particular, the delta 34S spread observed in the Isua banded iron formation (3.7 x 10(9) yr) is extremely narrow and coincides completely with the respective spreads yielded by contemporaneous rocks of assumed mantle derivation. Incipient minor differentiation of the isotope pattersn notably of Archaean sulfates may be accounted for by photosynthetic sulfur bacteria rather than by sulfate reducers. (2) Isotopic evidence of dissimilatory sulfate reduction is first observed in the upper Archaean of the Aldan Shield, Siberia (approximately 3.0 x 10(9) yr) and in the Michipicoten and Woman River banded iron formations of Canada (2.75 x 10(9) yr). This narrows down the possible time of appearance of sulfate respirers to the interval 2.8--3.1 x 10(9) yr. (3) Various lines of evidence indicate that photosynthesis is older than sulfate respiration, the SO4(2-) Utilized by the first sulfate reducers deriving most probably from oxidation of reduced sulfur compounds by photosynthetic sulfur bacteria. Sulfate respiration must, in turn, have antedated oxygen respiration as O2-respiring multicellular eucaryotes appear late in the Precambrian. (4) With the bulk of sulfate in the Archaean oceans probably produced by photosynthetic sulfur bacteria, the accumulation of SO4(2-) in the ancient seas must have preceded the buildup of appreciable steady state levels of free oxygen. Hence, the occurrence of sulfate evaporites in Archaean sediments does not necessarily provide testimony of oxidation weathering on the ancient continents and, consequently, of the existence of an atmospheric oxygen reservoir.

  9. Bacterial Sulfate Reduction Above 100-Degrees-C in Deep-Sea Hydrothermal Vent Sediments

    DEFF Research Database (Denmark)

    JØRGENSEN, BB; ISAKSEN, MF; JANNASCH, HW

    1992-01-01

    The currently known upper temperature limit for growth of organisms, shared by a number of archaebacteria, is 110-degrees-C. However, among the sulfate-reducing bacteria, growth temperatures of greater than 100-degrees-C have not been found. A search for high-temperature activity of sulfate-reducing...... bacteria was done in hot deep-sea sediments at the hydrothermal vents of the Guaymas Basin tectonic spreading center in the Gulf of California. Radiotracer studies revealed that sulfate reduction can occur at temperatures up to 110-degrees-C, with an optimum rate at 103-degrees to 106-degrees...

  10. Self-potential and Geochemical Measurements of Microbially Mediated Bacterial Sulfate Reduction in Saturated Sediments

    Science.gov (United States)

    Park, S.; Wolf, L. W.; Lee, M.; Saunders, J.

    2004-12-01

    In situ bioremediation is a non-invasive groundwater remediation technique that stimulates microorganisms to catalyze desirable redox reactions. Using a series of laboratory experiments, we explored the suitability of self-potential methods for monitoring bioremediation of metals contamination. Each experiment was designed to quantify the relationship between electrical potential and changing redox conditions and to determine factors influencing this relationship. In the first experiment, we introduced sulfate-reducting bacteria (SRB) into a Plexiglas tank containing autoclaved quartz sand saturated with an iron-rich Desulfovibrio (a sulfate-reducing bacteria) media. An array of non-polarizable electrodes positioned on the sediment surface was used to record electrical potentials both prior to and after inoculation for about 40 days. Changes in water chemistry were determined through a series of samples taken before, during and after the experiments. A significant decrease in total iron occurred after 3 days near the injection site; however, a clearly discernable decrease in electrical potential was not perceived until ~ day 10. Contoured SP data indicate that the redox front migrated away from the injection site over time. This change probably reflects the changing water chemistry as well as bacterial migration, as iron close to the injection site was consumed. The second experiment consisted of 4 glass columns, two of which were inoculated with SRB. The first pair contained sediment similar to the tank experiment saturated with an iron-rich media. The second pair contained the same sediment but was saturated with acid-mine drainage (AMD) collected from a contaminated field site. Each column was identically instrumented with a system of four electrodes. In the active columns, an increase in pH, a decrease in sulfate and a significant decrease in total iron in the media column accompany a decrease in electrical potential after about 10 days. Results of the study

  11. The Diversity of Sulfide Oxidation and Sulfate Reduction Genes Expressed by the Bacterial Communities of the Cariaco Basin, Venezuela.

    Science.gov (United States)

    Rodriguez-Mora, Maria J; Edgcomb, Virginia P; Taylor, Craig; Scranton, Mary I; Taylor, Gordon T; Chistoserdov, Andrei Y

    2016-01-01

    Qualitative expression of dissimilative sulfite reductase (dsrA), a key gene in sulfate reduction, and sulfide:quinone oxidoreductase (sqr), a key gene in sulfide oxidation was investigated. Neither of the two could be amplified from mRNA retrieved with Niskin bottles but were amplified from mRNA retrieved by the Deep SID. The sqr and sqr-like genes retrieved from the Cariaco Basin were related to the sqr genes from a Bradyrhizobium sp., Methylomicrobium alcaliphilum, Sulfurovum sp. NBC37-1, Sulfurimonas autotrophica, Thiorhodospira sibirica and Chlorobium tepidum. The dsrA gene sequences obtained from the redoxcline of the Cariaco Basin belonged to chemoorganotrophic and chemoautotrophic sulfate and sulfur reducers belonging to the class Deltaproteobacteria (phylum Proteobacteria) and the order Clostridiales (phylum Firmicutes).

  12. Optimization of a biological sulfate reduction process

    Energy Technology Data Exchange (ETDEWEB)

    Lebel, A.

    1985-01-01

    A biological sulfate reduction process is presented. It is intended to treat sulfate wastes by converting them to hydrogen sulfide which can be further oxidized to elemental sulfur. An optimization study of a completely-mixed reactor system was performed. Major operating parameters were determined at the bench-scale level. The study was conducted in batch-culture experiments, using a mixed Desulfovibrio culture from sewage. Kinetic values were extrapolated using the Michaelis-Menten model, which best fitted the experimental data. The iron loading and the sulfate loading significantly affected the growth and metabolism of sulfate reducing bacteria (SRB). A model to determine V/sub m/ from the iron and sulfate loading values was explored. The model is limited by sulfate loading greater than 4.3 g/l, where bacterial growth is inhibited. Iron loading is not anticipated to suppress the bacterial metabolism efficiency since it remained in the linear pattern even at inhibition levels. Studies of the metabolic behavior of SRB, using lactic acid as the carbon source, showed a requirement of 2.7 moles of lactate for each mole of sulfate. This technique and its application to the sulfur recovery process are discussed.

  13. Mercury mobilization and speciation linked to bacterial iron oxide and sulfate reduction: A column study to mimic reactive transfer in an anoxic aquifer

    Science.gov (United States)

    Hellal, Jennifer; Guédron, Stéphane; Huguet, Lucie; Schäfer, Jörg; Laperche, Valérie; Joulian, Catherine; Lanceleur, Laurent; Burnol, André; Ghestem, Jean-Philippe; Garrido, Francis; Battaglia-Brunet, Fabienne

    2015-09-01

    Mercury (Hg) mobility and speciation in subsurface aquifers is directly linked to its surrounding geochemical and microbial environment. The role of bacteria on Hg speciation (i.e., methylation, demethylation and reduction) is well documented, however little data is available on their impact on Hg mobility. The aim of this study was to test if (i) Hg mobility is due to either direct iron oxide reduction by iron reducing bacteria (IRB) or indirect iron reduction by sulfide produced by sulfate reducing bacteria (SRB), and (ii) to investigate its subsequent fate and speciation. Experiments were carried out in an original column setup combining geochemical and microbiological approaches that mimic an aquifer including an interface of iron-rich and iron depleted zones. Two identical glass columns containing iron oxides spiked with Hg(II) were submitted to (i) direct iron reduction by IRB and (ii) to indirect iron reduction by sulfides produced by SRB. Results show that in both columns Hg was leached and methylated during the height of bacterial activity. In the column where IRB are dominant, Hg methylation and leaching from the column was directly correlated to bacterial iron reduction (i.e., FeII release). In opposition, when SRB are dominant, produced sulfide induced indirect iron oxide reduction and rapid adsorption of leached Hg (or produced methylmercury) on neoformed iron sulfides (e.g., Mackinawite) or its precipitation as HgS. At the end of the SRB column experiment, when iron-oxide reduction was complete, filtered Hg and Fe concentrations increased at the outlet suggesting a leaching of Hg bound to FeS colloids that may be a dominant mechanism of Hg transport in aquifer environments. These experimental results highlight different biogeochemical mechanisms that can occur in stratified sub-surface aquifers where bacterial activities play a major role on Hg mobility and changes in speciation.

  14. Sulfate reduction in freshwater peatlands

    Energy Technology Data Exchange (ETDEWEB)

    Oequist, M.

    1996-12-31

    This text consist of two parts: Part A is a literature review on microbial sulfate reduction with emphasis on freshwater peatlands, and part B presents the results from a study of the relative importance of sulfate reduction and methane formation for the anaerobic decomposition in a boreal peatland. The relative importance of sulfate reduction and methane production for the anaerobic decomposition was studied in a small raised bog situated in the boreal zone of southern Sweden. Depth distribution of sulfate reduction- and methane production rates were measured in peat sampled from three sites (A, B, and C) forming an minerotrophic-ombrotrophic gradient. SO{sub 4}{sup 2-} concentrations in the three profiles were of equal magnitude and ranged from 50 to 150 {mu}M. In contrast, rates of sulfate reduction were vastly different: Maximum rates in the three profiles were obtained at a depth of ca. 20 cm below the water table. In A it was 8 {mu}M h{sup -1} while in B and C they were 1 and 0.05 {mu}M h{sup -1}, respectively. Methane production rates, however, were more uniform across the three nutrient regimes. Maximum rates in A (ca. 1.5 {mu}g d{sup -1} g{sup -1}) were found 10 cm below the water table, in B (ca. 1.0 {mu}g d{sup -1} g{sup -1}) in the vicinity of the water table, and in C (0.75 {mu}g d{sup -1} g{sup -1}) 20 cm below the water table. In all profiles both sulfate reduction and methane production rates were negligible above the water table. The areal estimates of methane production for the profiles were 22.4, 9.0 and 6.4 mmol m{sup -2} d{sup -1}, while the estimates for sulfate reduction were 26.4, 2.5, and 0.1 mmol m{sup -2} d{sup -1}, respectively. The calculated turnover times at the sites were 1.2, 14.2, and 198.7 days, respectively. The study shows that sulfate reducing bacteria are important for the anaerobic degradation in the studied peatland, especially in the minerotrophic sites, while methanogenic bacteria dominate in ombrotrophic sites Examination

  15. Rates of bacterial sulfate reduction and their response to experimental temperature changes in coastal sediments of Qi’ao Island, Zhujiang River Estuary in China

    Institute of Scientific and Technical Information of China (English)

    WU Zijun; ZHOU Huaiyang; PENG Xiaotong; LI Jiangtao; CHEN Guangqian

    2014-01-01

    Subtropical sediment cores (QA09-1 and QA12-9) from the coastal zone of Qi’ao Island in the Zhujiang River Estuary were used to determine the rates of sulfate reduction and their response to experimental tempera-ture changes. The depth distribution of the sulfate reduction rates was measured from whole-core incu-bations with radioactive tracer35SO42-, and peaks of 181.19 nmol/(cm3·d) and 107.49 nmol/(cm3·d) were exhibited at stations QA09-1 and QA12-9, respectively. The profiles of the pore water methane and sulfate concentrations demonstrated that anaerobic oxidation of methane occurred in the study area, which result-ed in an increase in the sulfate reduction rate at the base of the sulfate-reducing zone. Meanwhile, the sulfate concentration was not a major limiting factor for controlling the rates of sulfate reduction. In addition, the incubation of the sediment slurries in a block with a temperature gradient showed that the optimum tem-perature for the sulfate reduction reaction was 36°C. The Arrhenius plot was linear from the lowest tempera-ture to the optimum temperature, and the activation energy was at the lower end of the range of previously reported values. The results suggested that the ambient temperature regime of marine environments prob-ably selected for the microbial population with the best-suited physiology for the respective environment.

  16. The world-class Howard's Pass SEDEX Zn-Pb district, Selwyn Basin, Yukon. Part II: the roles of thermochemical and bacterial sulfate reduction in metal fixation

    Science.gov (United States)

    Gadd, Michael G.; Layton-Matthews, Daniel; Peter, Jan M.; Paradis, Suzanne; Jonasson, Ian R.

    2016-07-01

    The Howard's Pass district of sedimentary exhalative (SEDEX) Zn-Pb deposits is located in Yukon Territory and comprises 14 Zn-Pb deposits that contain an estimated 400.7 Mt of sulfide mineralization grading 4.5 % Zn and 1.5 % Pb. Mineralization is hosted in carbonaceous and calcareous and, to a lesser extent, siliceous mudstones. Pyrite is a minor but ubiquitous mineral in the host rocks stratigraphically above, within, and below mineralization. Petrographic analyses reveal that pyrite has a complex and protracted growth history, preserving multiple generations of pyrite within single grains. Sulfur isotope analysis of paragenetically complex pyrite by secondary ion mass spectrometry (SIMS) reveals that sulfur isotope compositions vary with textural zonation. Within the Zn-Pb deposits, framboidal pyrite is the earliest pyrite generation recognized, and this exclusively has negative δ34S values (mean = -16.6 ± 4.1 ‰; n = 55), whereas paragenetically later pyrite and galena possess positive δ34S values (mean = 29.1 ± 7.5 and 22.4 ± 3.0 ‰, n = 13 and 13, respectively). Previous studies found that sphalerite and galena mineral separates have exclusively positive δ34S values (mean = 16.8 ± 3.3 and 12.7 ± 2.8 ‰, respectively; Goodfellow and Jonasson 1986). These distinct sulfur isotope values are interpreted to reflect varying contributions of bacterially reduced seawater sulfate (negative; framboidal pyrite) and thermochemically reduced seawater sulfate and/or hydrothermal sulfate (positive; galena, sphalerite, later forms of pyrite). Textural evidence indicates that framboidal pyrite predates galena and sphalerite deposition. Collectively, the in situ and bulk sulfur isotope data are much more complex than δ34S values permitted by prevailing genetic models that invoke only biogenically reduced sulfur and coeval deposition of galena, sphalerite, and framboidal pyrite within a euxinic water column, and we present several lines of evidence that argue

  17. The world-class Howard's Pass SEDEX Zn-Pb district, Selwyn Basin, Yukon. Part II: the roles of thermochemical and bacterial sulfate reduction in metal fixation

    Science.gov (United States)

    Gadd, Michael G.; Layton-Matthews, Daniel; Peter, Jan M.; Paradis, Suzanne; Jonasson, Ian R.

    2017-03-01

    The Howard's Pass district of sedimentary exhalative (SEDEX) Zn-Pb deposits is located in Yukon Territory and comprises 14 Zn-Pb deposits that contain an estimated 400.7 Mt of sulfide mineralization grading 4.5 % Zn and 1.5 % Pb. Mineralization is hosted in carbonaceous and calcareous and, to a lesser extent, siliceous mudstones. Pyrite is a minor but ubiquitous mineral in the host rocks stratigraphically above, within, and below mineralization. Petrographic analyses reveal that pyrite has a complex and protracted growth history, preserving multiple generations of pyrite within single grains. Sulfur isotope analysis of paragenetically complex pyrite by secondary ion mass spectrometry (SIMS) reveals that sulfur isotope compositions vary with textural zonation. Within the Zn-Pb deposits, framboidal pyrite is the earliest pyrite generation recognized, and this exclusively has negative δ34S values (mean = -16.6 ± 4.1 ‰; n = 55), whereas paragenetically later pyrite and galena possess positive δ34S values (mean = 29.1 ± 7.5 and 22.4 ± 3.0 ‰, n = 13 and 13, respectively). Previous studies found that sphalerite and galena mineral separates have exclusively positive δ34S values (mean = 16.8 ± 3.3 and 12.7 ± 2.8 ‰, respectively; Goodfellow and Jonasson 1986). These distinct sulfur isotope values are interpreted to reflect varying contributions of bacterially reduced seawater sulfate (negative; framboidal pyrite) and thermochemically reduced seawater sulfate and/or hydrothermal sulfate (positive; galena, sphalerite, later forms of pyrite). Textural evidence indicates that framboidal pyrite predates galena and sphalerite deposition. Collectively, the in situ and bulk sulfur isotope data are much more complex than δ34S values permitted by prevailing genetic models that invoke only biogenically reduced sulfur and coeval deposition of galena, sphalerite, and framboidal pyrite within a euxinic water column, and we present several lines of evidence that argue

  18. Highly-defective nanocrystals of ZnS formed via dissimilatory bacterial sulfate reduction: A comparative study with their abiogenic analogues

    Science.gov (United States)

    Xu, Jie; Murayama, Mitsuhiro; Roco, Charles M.; Veeramani, Harish; Michel, F. Marc; Rimstidt, J. Donald; Winkler, Christopher; Hochella, Michael F.

    2016-05-01

    The physicochemical properties of a (nano)mineral are strongly affected by its formation processes, and thus, may indicate the (nano)mineral's formation environment and mechanism. This correlation, although relevant to a myriad of geological, environmental, and material-science processes, has not yet been fully appreciated and systematically explored. Here, using the Zn-S system, we demonstrate that biological and abiotic processes at similar experimental conditions can produce distinctive particle size, morphology, and crystal structure in the formed ZnS. Specifically, bacterial sulfate reduction led to the formation of highly-defective nanocrystals of mixed sphalerite and wurtzite in a range of ∼4-12 nm. By comparison, the abiotic procedures of titration- or diffusion-controlled precipitation resulted in the formation of polycrystalline aggregates that contained randomly-oriented, ultrafine crystals below ∼2-3 nm. The poor crystallinity in the abiogenic samples, regardless of the sulfide addition rates, reveals an overall nucleation-dominated, crystal growth-restricted pathway for the formation of ZnS from low-temperature aqueous solutions. The difficulty in the ZnS crystallization likely stems from the intrinsic surface instability of the ZnS growth units (i.e., in the form of nanoclusters) resulting from the dipole-dipole interactions of the unit with surrounding water molecules. In the biogenic samples, the ZnS crystallinity was significantly improved, indicating that the presence of bacterial metabolites somehow promoted the crystallization process. With evidence for the enlarged {1 1 1} planes in the biogenic nanocrystals, we attribute this enhancement mainly to the selective interaction of the bacterial metabolites with polar faces of the ZnS growth units, which might have effectively screened the dipole moments in the growth units and enabled their crystallographic assembly. By revealing the intrinsic difficulty and specific pathways for the Zn

  19. Sulfate reduction and methanogenesis at a freshwater

    DEFF Research Database (Denmark)

    Iversen, Vibeke Margrethe Nyvang; Andersen, Martin Søgaard; Jakobsen, Rasmus

    The freshwater-seawater interface was studied in a ~9-m thick anaerobic aquifer located in marine sand and gravel with thin peat lenses. Very limited amounts of iron-oxides are present. Consequently, the dominating redox processes are sulfate reduction and methanogenesis, and the groundwater...... is enriched in dissolved sulfide, methane and bicarbonate. Under normal conditions the seawater-freshwater interface is found at a depth of 4 m at the coastline and reaches the bottom of the aquifer 40 m inland. However, occasional flooding of the area occurs, introducing sulfate to the aquifer. Groundwater...... chemistry was studied in a 120 m transect perpendicular to the coast. Cores were taken for radiotracer rate measurements of sulfate reduction and methanogenesis. In the saline part of the aquifer 35 m inland, sulfate reduction was the dominant process with rates of 0.1-10 mM/year. In the freshwater part 100...

  20. Bacterial transport of sulfate, molybdate, and related oxyanions.

    Science.gov (United States)

    Aguilar-Barajas, Esther; Díaz-Pérez, César; Ramírez-Díaz, Martha I; Riveros-Rosas, Héctor; Cervantes, Carlos

    2011-08-01

    Sulfur is an essential element for microorganisms and it can be obtained from varied compounds, sulfate being the preferred source. The first step for sulfate assimilation, sulfate uptake, has been studied in several bacterial species. This article reviews the properties of different bacterial (and archaeal) transporters for sulfate, molybdate, and related oxyanions. Sulfate uptake is carried out by sulfate permeases that belong to the SulT (CysPTWA), SulP, CysP/(PiT), and CysZ families. The oxyanions molybdate, tungstate, selenate and chromate are structurally related to sulfate. Molybdate is transported mainly by the high-affinity ModABC system and tungstate by the TupABC and WtpABC systems. CysPTWA, ModABC, TupABC, and WtpABC are homologous ATP-binding cassette (ABC)-type transporters with similar organization and properties. Uptake of selenate and chromate oxyanions occurs mainly through sulfate permeases.

  1. Immunological detection of enzymes for sulfate reduction in anaerobic methane-oxidizing consortia.

    Science.gov (United States)

    Milucka, Jana; Widdel, Friedrich; Shima, Seigo

    2013-05-01

    Anaerobic oxidation of methane (AOM) coupled to sulfate reduction (SR) at marine gas seeps is performed by archaeal-bacterial consortia that have so far not been cultivated in axenic binary or pure cultures. Knowledge about possible biochemical reactions in AOM consortia is based on metagenomic retrieval of genes related to those in archaeal methanogenesis and bacterial sulfate reduction, and identification of a few catabolic enzymes in protein extracts. Whereas the possible enzyme for methane activation (a variant of methyl-coenzyme M reductase, Mcr) was shown to be harboured by the archaea, enzymes for sulfate activation and reduction have not been localized so far. We adopted a novel approach of fluorescent immunolabelling on semi-thin (0.3-0.5 μm) cryosections to localize two enzymes of the SR pathway, adenylyl : sulfate transferase (Sat; ATP sulfurylase) and dissimilatory sulfite reductase (Dsr) in microbial consortia from Black Sea methane seeps. Both Sat and Dsr were exclusively found in an abundant microbial morphotype (c. 50% of all cells), which was tentatively identified as Desulfosarcina/Desulfococcus-related bacteria. These results show that ANME-2 archaea in the Black Sea AOM consortia did not express bacterial enzymes of the canonical sulfate reduction pathway and thus, in contrast to previous suggestions, most likely cannot perform canonical sulfate reduction. Moreover, our results show that fluorescent immunolabelling on semi-thin cryosections which to our knowledge has been so far only applied on cell tissues, is a powerful tool for intracellular protein detection in natural microbial associations.

  2. Microbial reduction of sulfate injected to gas condensate plumes in cold groundwater

    Science.gov (United States)

    Van Stempvoort, Dale R.; Armstrong, James; Mayer, Bernhard

    2007-07-01

    Despite a rapid expansion over the past decade in the reliance on intrinsic bioremediation to remediate petroleum hydrocarbon plumes in groundwater, significant research gaps remain. Although it has been demonstrated that bacterial sulfate reduction can be a key electron accepting process in many petroleum plumes, little is known about the rate of this reduction process in plumes derived from crude oil and gas condensates at cold-climate sites (mean temperature study, sulfate was injected into groundwater contaminated by gas condensate plumes at two petroleum sites in Alberta, Canada to enhance in-situ bioremediation. In both cases the groundwater near the water table had low temperature (6-9 °C). Monitoring data had provided strong evidence that bacterial sulfate reduction was a key terminal electron accepting process (TEAP) in the natural attenuation of dissolved hydrocarbons at these sites. At each site, water with approximately 2000 mg/L sulfate and a bromide tracer was injected into a low-sulfate zone within a condensate-contaminant plume. Monitoring data collected over several months yielded conservative estimates for sulfate reduction rates based on zero-order kinetics (4-6 mg/L per day) or first-order kinetics (0.003 and 0.01 day - 1 ). These results favor the applicability of in-situ bioremediation techniques in this region, under natural conditions or with enhancement via sulfate injection.

  3. Pressure effect on dissimilatory sulfate reduction

    Science.gov (United States)

    Williamson, A. J.; Carlson, H. K.; Coates, J. D.

    2015-12-01

    Biosouring is the production of H2S by sulfate reducing microorganisms (SRM) in-situ or in the produced fluids of oil reservoirs. Sulfide is explosive, toxic and corrosive which can trigger equipment and transportation failure, leading to environmental catastrophe. As oil exploration and reservoir development continue, subsequent enhanced recovery is occurring in progressively deeper formations and typical oil reservoir pressures range from 10-50 MPa. Therefore, an understanding of souring control effects will require an accurate understanding of the influence of pressure on SRM metabolism and the efficacy of souring control treatments at high pressure. Considerable work to date has focussed on souring control at ambient pressure; however, the influence of pressure on biogeochemical processes and souring treatments in oil reservoirs is poorly understood. To explore the impact of pressure on SRM, wild type Desulfovibrio alaskensis G20 (isolated from a producing oil well in Ventura County, California) was grown under a range of pressures (0.1-14 MPa) at 30 °C. Complete sulfate reduction occurred in all pressures tested within 3 days, but microbial growth was inhibited with increasing pressure. Bar-seq identified several genes associated with flagella biosynthesis (including FlhB) and assembly as important for survival at elevated pressure and fitness was confirmed using individual transposon mutants. Flagellar genes have previously been implicated with biofilm formation and confocal microscopy on glass slides incubated with wild type D. alaskensis G20 showed more biomass associated with surfaces under pressure, highlighting the link between pressure, flagellar and biofilm formation. To determine the effect of pressure on the efficacy of SRM inhibitors, IC50 experiments were conducted and D. alaskensis G20 showed a greater resistance to nitrate and the antibiotic chloramphenicol, but a lower resistance to perchlorate. These results will be discussed in the context of

  4. Sulfate Reduction and Thiosulfate Transformations in a Cyanobacterial Mat during a Diel Oxygen Cycle

    DEFF Research Database (Denmark)

    JØRGENSEN, BB

    1994-01-01

    Bacterial sulfate reduction and transformations of thiosulfate were studied with radiotracers in a Microcoleus chthono-plastes-dominated microbial mat growing in a hypersaline pond at the Red Sea. The study showed how a diel cycle of oxygen evolution affected respiration by sulfate-reducing bacte......Bacterial sulfate reduction and transformations of thiosulfate were studied with radiotracers in a Microcoleus chthono-plastes-dominated microbial mat growing in a hypersaline pond at the Red Sea. The study showed how a diel cycle of oxygen evolution affected respiration by sulfate......-reducing bacteria and the metabolism of thiosulfate through oxidative and reductive pathways. Sulfate reduction occurred in both oxic and anoxic layers of the mat and varied diurnally, apparently according to temperature rather than to oxygen. Time course experiments showed that the radiotracer method...... of the mat, there was a shift from predominant oxidation in the oxic zone to predominant reduction below. Concurrent disproportionation of thiosulfate to sulfate and sulfide occurred in all zones and was an important pathway of the sulfur cycle in the mat....

  5. Sulfate reduction at low pH in organic wastewaters

    NARCIS (Netherlands)

    Lopes, S.I.C.

    2007-01-01

    The objective of the research described in this thesis was to investigate the operational window of dissimilatory sulfate reduction at low pH (6, 5 and 4) during the acidification of organic wastewaters. High sulfate reduction efficiencies at low pH are desirable for a more sustainable operation of

  6. Drag Reduction of Bacterial Cellulose Suspensions

    Directory of Open Access Journals (Sweden)

    Satoshi Ogata

    2011-01-01

    Full Text Available Drag reduction due to bacterial cellulose suspensions with small environmental loading was investigated. Experiments were carried out by measuring the pressure drop in pipe flow. It was found that bacterial cellulose suspensions give rise to drag reduction in the turbulent flow range. We observed a maximum drag reduction ratio of 11% and found that it increased with the concentration of the bacterial cellulose suspension. However, the drag reduction effect decreased in the presence of mechanical shear.

  7. Sulfate Reduction in Groundwater: Characterization and Applications for Remediation

    Energy Technology Data Exchange (ETDEWEB)

    Miao, Z.; Brusseau, M. L.; Carroll, Kenneth C.; Carreon-Diazconti, C.; Johnson, B.

    2012-06-01

    Sulfate is ubiquitous in groundwater, with both natural and anthropogenic sources. Sulfate reduction reactions play a significant role in mediating redox conditions and biogeochemical processes for subsurface systems. They also serve as the basis for innovative in-situ methods for groundwater remediation. An overview of sulfate reduction in subsurface environments is provided, with a specific focus on implications for groundwater remediation. A case study presenting the results of a pilot-scale ethanol injection test illustrates the advantages and difficulties associated with the use of electron-donor amendments for sulfate remediation.

  8. In-situ metal precipitation in a zinc-aerobic, sandy aquifer by means of biological sulfate reduction

    NARCIS (Netherlands)

    Janssen, G.M.C.M.; Temminghoff, E.J.M.

    2004-01-01

    The applicability of in situ metal precipitation (ISMP) based on bacterial sulfate reduction (BSR) with molasses as carbon source was tested for the immobilization of a zinc plume in an aquifer with highly unsuitable initial conditions (high Eh, low pH, low organic matter content, and low sulfate co

  9. Biotechnological aspects of sulfate reduction with methane as electron donor

    OpenAIRE

    Meulepas, R.J.W.; Stams, A.J.M.; Lens, P. N L

    2010-01-01

    Biological sulfate reduction can be used for the removal and recovery of oxidized sulfur compounds and metals from waste streams. However, the costs of conventional electron donors, like hydrogen and ethanol, limit the application possibilities. Methane from natural gas or biogas would be a more attractive electron donor. Sulfate reduction with methane as electron donor prevails in marine sediments. Recently, several authors succeeded in cultivating the responsible microorganisms in vitro. In...

  10. Dimethylsulfoxide reduction by marine sulfate-reducing bacteria

    NARCIS (Netherlands)

    Jonkers, Henk M.; Maarel, Marc J.E.C. van der; Gemerden, Hans van; Hansen, Theo A.

    1996-01-01

    Dimethylsulfoxide (DMSO) reduction occurred in five out of nine strains of sulfate-reducing bacteria from marine or saline environments, but not in three freshwater isolates. DMSO reduction supported growth in all positive strains. In Desulfovibrio desulfuricans strain PA2805, DMSO reduction occurre

  11. Volatile fatty acids as substrates for iron and sulfate reduction in Arctic marine sediments, Svalbard

    Science.gov (United States)

    Finke, N.; Vandieken, V.; Jorgensen, B. B.

    2006-12-01

    the sulfate reduction in the 0-2 cm and 5-9 cm layer, respectively. Together acetate, lactate, propionate and isobutyrate accounted for 21 and 52% of the sulfate reduction, in the 0-2 cm and 5-9 cm layer, respectively. Assigning all acetate and lactate turnover in the selenate inhibited samples, these two VFA account for less than 10 and 2%, respectively, of the iron reduction in the 0-2 cm layer. Thus, 67 and 48% of the terminal oxidation in the 0-2cm and 5-9 cm layer must be driven by electron donors other than the investigated VFA. The sulfate reduction rates as well as the VFA turnover rates were at the lower end of reported rates from similar studies, mostly measured in temperate sites (e.g. [2-4, 6, 7]). Comparing a series of studies with different in situ temperatures shows, parameters other than in situ temperature seem to be more important in determining the sulfate reduction and VFA turnover rates. [1] Thamdrup, B. (2000) Bacterial manganese and iron reduction in aquatic sediments, 41-84 pp. Kluwer Academic / Plenum Publ., New York. [2] Parkes, R.J., Gibson, G.R., Mueller-Harvey, I., Buckingham, W.J. and Herbert, R.A. (1989) J. Gen. Microbiol. 135, 175-187. [3] Christensen, D. (1984) Limnol. Oceanogr. 29, 189-192. [4] Shaw, D.G. and McIntosh, D.J. (1990) Estuarine Coastal & Shelf Science 31, 775-788. [5] Levitus, S. and Boyer, T. (1994) World Ocean Atlas, pp. US Department of Commerce, Washington, DC. [6] Kristensen, E., King, G.M., Holmer, M., Banta, G.T., Jensen, M.H., Hansen, K. and Bussarawit, N. (1994) Mar. Ecol.-Prog. Ser. 109, 245-255. [7] Wellsbury, P. and Parkes, R.J. (1995) FEMS Microbiol. Ecol. 17, 85-94.

  12. Rates of microbial sulfate reduction control the sizes of biogenic iron sulfide aggregates

    Science.gov (United States)

    Jin, Q.

    2005-12-01

    Sulfide minerals occur widely in freshwater and marine sediments as byproducts of microbial sulfate reduction and as end products of heavy metal bioremediation. They form when metals in the environments combine with sulfide produced from the metabolism of sulfate reducing bacteria. We used chemostat bioreactors to study sizes and crystal structures of iron sulfide (FeS) minerals produced by Desulfovibrio vulgaris, D. desulfuricans strain G20, and subspecies desulfuricans. FeS nanoparticles and their aggregates are characterized using X-ray diffraction (XRD), transmission electron microscopy (TEM), scanning electron microscopy (SEM), and dynamic light scattering (DLS). FeS nanoparticles produced by sulfate reducing bacteria are extremely small, usually less than around 10 nm in diameter. Nanoparticles do not occur as individual nanoparticles, but as aggregates. The sizes of FeS aggregates are affected by sulfate reduction rates, Fe(II) concentration, pH, ionic strength, organic matter concentration, bacterial species, etc. Aggregate size ranges from about 500 nm at very large sulfate reduction rates to about 1,500 nm at very small rates. Variations in Fe(II) concentration also lead to a difference up to 500 nm in FeS aggregate size. Different bacterial species produce nanoparticle aggregates of different sizes under similar growth conditions. For example, D. vulgaris produces FeS aggregates with sizes 500 nm smaller than those by strain G20. The inverse relationship between FeS aggregate sizes and sulfate reduction rates is important in evaluating metal bioremediation strategies. Previous approaches have focused on stimulating microbial activities in natural environments. However, our experimental results suggest that increasing metabolic rates may decrease the aggregate size, increasing the mobility of colloidal aggregates. Therefore, the balance between microbial activities and sizes of biogenic aggregates may be an important consideration in the design and

  13. Arsenic mobilization from sediments in microcosms under sulfate reduction.

    Science.gov (United States)

    Sun, Jing; Quicksall, Andrew N; Chillrud, Steven N; Mailloux, Brian J; Bostick, Benjamin C

    2016-06-01

    Arsenic is often assumed to be immobile in sulfidic environments. Here, laboratory-scale microcosms were conducted to investigate whether microbial sulfate reduction could control dissolved arsenic concentrations sufficiently for use in groundwater remediation. Sediments from the Vineland Superfund site and the Coeur d'Alene mining district were amended with different combination of lactate and sulfate and incubated for 30-40 days. In general, sulfate reduction in Vineland sediments resulted in transient and incomplete arsenic removal, or arsenic release from sediments. Sulfate reduction in the Coeur d'Alene sediments was more effective at removing arsenic from solution than the Vineland sediments, probably by arsenic substitution and adsorption within iron sulfides. X-ray absorption spectroscopy indicated that the Vineland sediments initially contained abundant reactive ferrihydrite, and underwent extensive sulfur cycling during incubation. As a result, arsenic in the Vineland sediments could not be effectively converted to immobile arsenic-bearing sulfides, but instead a part of the arsenic was probably converted to soluble thioarsenates. These results suggest that coupling between the iron and sulfur redox cycles must be fully understood for in situ arsenic immobilization by sulfate reduction to be successful.

  14. Hydrogen sulfide (H2S) emission control by aerobic sulfate reduction in landfill

    Science.gov (United States)

    Long, Yuyang; Fang, Yuan; Shen, Dongsheng; Feng, Huajun; Chen, Ting

    2016-12-01

    H2S emissions from landfill sites resulting from sulfate reduction has become a serious human health and ecological safety issue. This study investigated H2S emission behavior and sulfate metabolism occurring in simulated landfills under different operating conditions. Under aerobic conditions, great attenuation of the original sulfate content (from around 6000 mg kg‑1 dropped to below 800 mg kg‑1) with corresponding accumulation of sulfides and elemental sulfur were observed, indicating that sulfate reduction processes were intense under such conditions. Analysis of the bacterial community in these landfills showed great abundance (1.10%) and diversity of sulfur reducing types, confirming their active involvement in this process. In particular, the total abundance of sulfate-reducing bacteria increased nearly 30 times under aerobic conditions, leading to the transformation of sulfate to sulfide and other reduced sulfur species. Although exposure to air promoted the accumulation of sulfide, it did not lead to an increase in H2S release in these landfills.

  15. Biotechnological aspects of sulfate reduction with methane as electron donor

    NARCIS (Netherlands)

    Meulepas, R.J.W.; Stams, A.J.M.; Lens, P.N.L.

    2010-01-01

    Biological sulfate reduction can be used for the removal and recovery of oxidized sulfur compounds and metals from waste streams. However, the costs of conventional electron donors, like hydrogen and ethanol, limit the application possibilities. Methane from natural gas or biogas would be a more att

  16. D-Area Sulfate Reduction Studty Comprehensive Final Report

    Energy Technology Data Exchange (ETDEWEB)

    Phifer, M

    2005-02-11

    An acidic/metals/sulfate, groundwater contaminant plume emanates from the D-Area Coal Pile Runoff Basin (DCPRB) at the Savannah River Site (SRS), due to the contaminated runoff the basin receives from the D-Area coal pile. A Treatability Study Work Plan (TSWP) (WSRC 2001) was implemented to evaluate the potential for the sulfate reduction remediation of the DCPRB acidic/metals/sulfate, groundwater contaminant plume. The following studies, implemented as part of the TSWP, are documented herein: Bacteria Population and Organic Selection Laboratory Testing; DTT-1 Trench Evaluation; DIW-1 Organic Application Field Study-Part 1; and DIW-1 Organic Application Field Study-Part 2. Evaluation of sulfate reduction applicability actually began with a literature search and feasibility report in mid 2001, which fed into the TSWP. Physical completion of TSWP work occurred in late 2004 with the completion of the DIW-1 Organic Application Field Study-Part 2. The following are the primary conclusions drawn based upon this 3-year effort: (1) Pure soybean oil provides a long-term, indirect, SRB carbon source that floats on top of the water table (by indirect it means that the soybean oil must be degraded by other microbes prior to utilization by SRB) for the promotion of sulfate reduction remediation. Soybean oil produces no known SRB inhibitory response and therefore large quantities can be injected. (2) Sodium lactate provides a short-term, immediately available, direct, SRB carbon source that is miscible with the groundwater and therefore flows with the groundwater until it has been completely utilized for the promotion of sulfate reduction remediation. Lactate at elevated concentrations (greater than 6 g/L) does produce a SRB inhibitory response and therefore small quantities must be injected frequently. (3) The use of limestone to buffer the contaminated groundwater facilitates sulfate reduction remediation through the injection of organic substrate. Additionally conclusions and

  17. Streptomyces lunalinharesii 235 prevents the formation of a sulfate-reducing bacterial biofilm.

    Science.gov (United States)

    Rosa, Juliana Pacheco da; Tibúrcio, Samyra Raquel Gonçalves; Marques, Joana Montezano; Seldin, Lucy; Coelho, Rosalie Reed Rodrigues

    2016-01-01

    Streptomyces lunalinharesii strain 235 produces an antimicrobial substance that is active against sulfate reducing bacteria, the major bacterial group responsible for biofilm formation and biocorrosion in petroleum reservoirs. The use of this antimicrobial substance for sulfate reducing bacteria control is therefore a promising alternative to chemical biocides. In this study the antimicrobial substance did not interfere with the biofilm stability, but the sulfate reducing bacteria biofilm formation was six-fold smaller in carbon steel coupons treated with the antimicrobial substance when compared to the untreated control. A reduction in the most probable number counts of planktonic cells of sulfate reducing bacteria was observed after treatments with the sub-minimal inhibitory concentration, minimal inhibitory concentration, and supra-minimal inhibitory concentration of the antimicrobial substance. Additionally, when the treated coupons were analyzed by scanning electron microscopy, the biofilm formation was found to be substantially reduced when the supra-minimal inhibitory concentration of the antimicrobial substance was used. The coupons used for the biofilm formation had a small weight loss after antimicrobial substance treatment, but corrosion damage was not observed by scanning electron microscopy. The absence of the dsrA gene fragment in the scraped cell suspension after treatment with the supra-minimal inhibitory concentration of the antimicrobial substance suggests that Desulfovibrio alaskensis was not able to adhere to the coupons. This is the first report on an antimicrobial substance produced by Streptomyces active against sulfate reducing bacteria biofilm formation. The application of antimicrobial substance as a potential biocide for sulfate reducing bacteria growth control could be of great interest to the petroleum industry.

  18. Streptomyces lunalinharesii 235 prevents the formation of a sulfate-reducing bacterial biofilm

    Directory of Open Access Journals (Sweden)

    Juliana Pacheco da Rosa

    Full Text Available ABSTRACT Streptomyces lunalinharesii strain 235 produces an antimicrobial substance that is active against sulfate reducing bacteria, the major bacterial group responsible for biofilm formation and biocorrosion in petroleum reservoirs. The use of this antimicrobial substance for sulfate reducing bacteria control is therefore a promising alternative to chemical biocides. In this study the antimicrobial substance did not interfere with the biofilm stability, but the sulfate reducing bacteria biofilm formation was six-fold smaller in carbon steel coupons treated with the antimicrobial substance when compared to the untreated control. A reduction in the most probable number counts of planktonic cells of sulfate reducing bacteria was observed after treatments with the sub-minimal inhibitory concentration, minimal inhibitory concentration, and supra-minimal inhibitory concentration of the antimicrobial substance. Additionally, when the treated coupons were analyzed by scanning electron microscopy, the biofilm formation was found to be substantially reduced when the supra-minimal inhibitory concentration of the antimicrobial substance was used. The coupons used for the biofilm formation had a small weight loss after antimicrobial substance treatment, but corrosion damage was not observed by scanning electron microscopy. The absence of the dsrA gene fragment in the scraped cell suspension after treatment with the supra-minimal inhibitory concentration of the antimicrobial substance suggests that Desulfovibrio alaskensis was not able to adhere to the coupons. This is the first report on an antimicrobial substance produced by Streptomyces active against sulfate reducing bacteria biofilm formation. The application of antimicrobial substance as a potential biocide for sulfate reducing bacteria growth control could be of great interest to the petroleum industry.

  19. An intertwined evolutionary history of methanogenic archaea and sulfate reduction.

    Directory of Open Access Journals (Sweden)

    Dwi Susanti

    Full Text Available Hydrogenotrophic methanogenesis and dissimilatory sulfate reduction, two of the oldest energy conserving respiratory systems on Earth, apparently could not have evolved in the same host, as sulfite, an intermediate of sulfate reduction, inhibits methanogenesis. However, certain methanogenic archaea metabolize sulfite employing a deazaflavin cofactor (F(420-dependent sulfite reductase (Fsr where N- and C-terminal halves (Fsr-N and Fsr-C are homologs of F(420H(2 dehydrogenase and dissimilatory sulfite reductase (Dsr, respectively. From genome analysis we found that Fsr was likely assembled from freestanding Fsr-N homologs and Dsr-like proteins (Dsr-LP, both being abundant in methanogens. Dsr-LPs fell into two groups defined by following sequence features: Group I (simplest, carrying a coupled siroheme-[Fe(4-S(4] cluster and sulfite-binding Arg/Lys residues; Group III (most complex, with group I features, a Dsr-type peripheral [Fe(4-S(4] cluster and an additional [Fe(4-S(4] cluster. Group II Dsr-LPs with group I features and a Dsr-type peripheral [Fe(4-S(4] cluster were proposed as evolutionary intermediates. Group III is the precursor of Fsr-C. The freestanding Fsr-N homologs serve as F(420H(2 dehydrogenase unit of a putative novel glutamate synthase, previously described membrane-bound electron transport system in methanogens and of assimilatory type sulfite reductases in certain haloarchaea. Among archaea, only methanogens carried Dsr-LPs. They also possessed homologs of sulfate activation and reduction enzymes. This suggested a shared evolutionary history for methanogenesis and sulfate reduction, and Dsr-LPs could have been the source of the oldest (3.47-Gyr ago biologically produced sulfide deposit.

  20. Reduction of molybdate by sulfate-reducing bacteria.

    Science.gov (United States)

    Biswas, Keka C; Woodards, Nicole A; Xu, Huifang; Barton, Larry L

    2009-02-01

    Molybdate is an essential trace element required by biological systems including the anaerobic sulfate-reducing bacteria (SRB); however, detrimental consequences may occur if molybdate is present in high concentrations in the environment. While molybdate is a structural analog of sulfate and inhibits sulfate respiration of SRB, little information is available concerning the effect of molybdate on pure cultures. We followed the growth of Desulfovibrio gigas ATCC 19364, Desulfovibrio vulgaris Hildenborough, Desulfovibrio desulfuricans DSM 642, and D. desulfuricans DSM 27774 in media containing sub-lethal levels of molybdate and observed a red-brown color in the culture fluid. Spectral analysis of the culture fluid revealed absorption peaks at 467, 395 and 314 nm and this color is proposed to be a molybdate-sulfide complex. Reduction of molybdate with the formation of molybdate disulfide occurs in the periplasm D. gigas and D. desulfuricans DSM 642. From these results we suggest that the occurrence of poorly crystalline Mo-sulfides in black shale may be a result from SRB reduction and selective enrichment of Mo in paleo-seawater.

  1. Response of fermentation and sulfate reduction to experimental temperature changes in temperate and Arctic marine sediments

    DEFF Research Database (Denmark)

    Finke, Niko; Jørgensen, Bo Barker

    2008-01-01

    Anaerobic degradation of organic material generally proceeds through a sequence of steps, including polymer hydrolysis, fermentation and respiration or methanogenesis. The intermediates, such as volatile fatty acids (VFA) or H(2), are generally maintained at low concentration, showing a close...... coupling of the terminal oxidation to fermentation. We exposed marine sediments to extreme temperature perturbations to study the nature and robustness of this coupling. Bacterial sulfate reduction and its dependence on fermentation were studied experimentally over a broad temperature range of -0.3 to 40...... optimum temperature was higher and did not change with incubation time. Up to a critical temperature, the concentrations of VFA remained low, acetate and

  2. The anaerobic degradation of organic matter in Danish coastal sediments: iron reduction, manganese reduction, and sulfate reduction

    DEFF Research Database (Denmark)

    Canfield, Donald Eugene; Thamdrup, B; Hansen, Jens Würgler

    1993-01-01

    important than sulfate reduction. Most of the Mn reduction in these sediments may have been coupled to the oxidation of acid volatile sulfides (AVS), rather than to dissimilatory reduction. High rates of metal oxide reduction at all sites were driven by active recycling of both Fe and Mn, encouraged......We used a combination of porewater and solid phase analysis, as well as a series of sediment incubations, to quantify organic carbon oxidation by dissimilatory Fe reduction, Mn reduction, and sulfate reduction, in sediments from the Skagerrak (located off the northeast coast of Jutland, Denmark......). In the deep portion of the basin, surface Mn enrichments reached 3.5 wt%, and Mn reduction was the only important anaerobic carbon oxidation process in the upper 10 cm of the sediment. In the less Mn-rich sediments from intermediate depths in the basin, Fe reduction ranged from somewhat less, to far more...

  3. Sulfate assimilation mediates tellurite reduction and toxicity in Saccharomyces cerevisiae.

    Science.gov (United States)

    Ottosson, Lars-Göran; Logg, Katarina; Ibstedt, Sebastian; Sunnerhagen, Per; Käll, Mikael; Blomberg, Anders; Warringer, Jonas

    2010-10-01

    Despite a century of research and increasing environmental and human health concerns, the mechanistic basis of the toxicity of derivatives of the metalloid tellurium, Te, in particular the oxyanion tellurite, Te(IV), remains unsolved. Here, we provide an unbiased view of the mechanisms of tellurium metabolism in the yeast Saccharomyces cerevisiae by measuring deviations in Te-related traits of a complete collection of gene knockout mutants. Reduction of Te(IV) and intracellular accumulation as metallic tellurium strongly correlated with loss of cellular fitness, suggesting that Te(IV) reduction and toxicity are causally linked. The sulfate assimilation pathway upstream of Met17, in particular, the sulfite reductase and its cofactor siroheme, was shown to be central to tellurite toxicity and its reduction to elemental tellurium. Gene knockout mutants with altered Te(IV) tolerance also showed a similar deviation in tolerance to both selenite and, interestingly, selenomethionine, suggesting that the toxicity of these agents stems from a common mechanism. We also show that Te(IV) reduction and toxicity in yeast is partially mediated via a mitochondrial respiratory mechanism that does not encompass the generation of substantial oxidative stress. The results reported here represent a robust base from which to attack the mechanistic details of Te(IV) toxicity and reduction in a eukaryotic organism.

  4. Sulfate inhibition effect on sulfate reducing bacteria

    Directory of Open Access Journals (Sweden)

    Sulaiman Al Zuhair

    2008-12-01

    Full Text Available There is an increasing interest in the potential of bacterial sulfate reduction as an alternative method for sulfate removal from wastewater. Under anaerobic conditions, sulfate-reducing bacteria (SRB utilize sulfate to oxidize organic compounds and generate sulfide (S2-. SRB were successfully isolated from sludge samples obtained from a local petroleum refinery, and used for sulfate removal. The effects of initial sulfate concentration, temperature and pH on the rate of bacterial growth and anaerobic sulfate removal were investigated and the optimum conditions were identified. The experimental data were used to determine the parameters of two proposed kinetic model, which take into consideration substrate inhibition effect. Keywords: Sulfate Reducing Bacteria, Sulfate, Kinetic Model, Biotreatement, Inhibition Received: 31 August 2008 / Received in revised form: 18 September 2008, Accepted: 18 September 2008 Published online: 28 September 2008

  5. Mechanisms of bacterially catalyzed reductive dehalogenation

    Energy Technology Data Exchange (ETDEWEB)

    Picardal, F.W.

    1992-12-31

    Nine bacteria were tested for the ability to dehalogenate tetrachloromethane (CT), tetrachloroethene (PCE), and 1, 1, 1-trichloroethane (TCA) under anaerobic conditions. Three bacteria were able to reductively dehalogenate CT. Dehalogenation ability was not readily linked to a common metabolism or changes in culture redox potential. None of the bacteria tested were able to dehalogenate PCE or TCA. One of the bacteria capable of dehalogenating CT, Shewanella putrefaciens, was chosen as a model organism to study mechanisms of bacterially catalyzed reductive dehalogenation. The effect of a variety of alternate electron acceptors on CT dehalogenation ability by S. putrefaciens was determined. oxygen and nitrogen oxides were inhibitory but Fe (III), trimethylamine oxide, and fumarate were not. A model of the electron transport chain of S. putrefaciens was developed to explain inhibition patterns. A period of microaerobic growth prior to CT exposure increased the ability of S. putrefaciens to dehalogenate CT. A microaerobic growth period also increased cytochrome concentrations. A relationship between cytochrome content and dehalogenation ability was developed from studies in which cytochrome concentrations in S. putrefaciens were manipulated by changing growth conditions. Stoichiometry studies using {sup 14}C-CT suggested that CT was first reduced to form a trichloromethyl radical. Reduction of the radical to produce chloroform and reaction of the radical with cellular biochemicals explained observed product distributions. Carbon dioxide or other fully dehalogenated products were not found.

  6. Microsensor Measurements of Sulfate Reduction and Sulfide Oxidation in Compact Microbial Communities of Aerobic Biofilms Rid A-1977-2009

    DEFF Research Database (Denmark)

    KUHL, M.; JØRGENSEN, BB

    1992-01-01

    The microzonation of O2 respiration, H2S oxidation, and SO4(2-) reduction in aerobic trickling-filter biofilms was studied by measuring concentration profiles at high spatial resolution (25 to 100-mu-m) with microsensors for O2, S2-, and pH. Specific reaction rates were calculated from measured......, whereas sulfate reduction occurred in deeper, anoxic parts of the biofilm. Sulfate reduction accounted for up to 50% of the total mineralization of organic carbon in the biofilms. All H2S produced from sulfate reduction was reoxidized by O2 in a narrow reaction zone, and no H2S escaped to the overlying...... water. Turnover times of H2S and O2 in the reaction zone were only a few seconds owing to rapid bacterial H2S oxidation. Anaerobic H2S oxidation with NO3- could be induced by addition of nitrate to the medium. Total sulfate reduction rates increased when the availability of SO4(2-) or organic substrate...

  7. The role of labile sulfur compounds in thermochemical sulfate reduction

    Science.gov (United States)

    Amrani, Alon; Zhang, Tongwei; Ma, Qisheng; Ellis, Geoffrey S.; Tang, Yongchun

    2008-06-01

    The reduction of sulfate to sulfide coupled with the oxidation of hydrocarbons to carbon dioxide, commonly referred to as thermochemical sulfate reduction (TSR), is an important abiotic alteration process that most commonly occurs in hot carbonate petroleum reservoirs. In the present study we focus on the role that organic labile sulfur compounds play in increasing the rate of TSR. A series of gold-tube hydrous pyrolysis experiments were conducted with n-octane and CaSO4 in the presence of reduced sulfur (e.g. H2S, S°, organic S) at temperatures of 330 and 356 °C under a constant confining pressure. The in-situ pH was buffered to 3.5 (∼6.3 at room temperature) with talc and silica. For comparison, three types of oil with different total S and labile S contents were reacted under similar conditions. The results show that the initial presence of organic or inorganic sulfur compounds increases the rate of TSR. However, organic sulfur compounds, such as 1-pentanethiol or diethyldisulfide, were significantly more effective in increasing the rate of TSR than H2S or elemental sulfur (on a mole S basis). The increase in rate is achieved at relatively low concentrations of 1-pentanethiol, less than 1 wt% of the total n-octane, which is comparable to the concentration of organic S that is common in many oils (∼0.3 wt%). We examined several potential reaction mechanisms to explain the observed reactivity of organic LSC. First, the release of H2S from the thermal degradation of thiols was discounted as an important mechanism due to the significantly greater reactivity of thiol compared to an equivalent amount of H2S. Second, we considered the generation of olefines in association with the elimination of H2S during thermal degradation of thiols because olefines are much more reactive than n-alkanes during TSR. In our experiments, olefines increased the rate of TSR, but were less effective than 1-pentanethiol and other organic LSC. Third, the thermal decomposition of

  8. The role of labile sulfur compounds in thermochemical sulfate reduction

    Science.gov (United States)

    Amrani, A.; Zhang, T.; Ma, Q.; Ellis, G.S.; Tang, Y.

    2008-01-01

    The reduction of sulfate to sulfide coupled with the oxidation of hydrocarbons to carbon dioxide, commonly referred to as thermochemical sulfate reduction (TSR), is an important abiotic alteration process that most commonly occurs in hot carbonate petroleum reservoirs. In the present study we focus on the role that organic labile sulfur compounds play in increasing the rate of TSR. A series of gold-tube hydrous pyrolysis experiments were conducted with n-octane and CaSO4 in the presence of reduced sulfur (e.g. H2S, S??, organic S) at temperatures of 330 and 356 ??C under a constant confining pressure. The in-situ pH was buffered to 3.5 (???6.3 at room temperature) with talc and silica. For comparison, three types of oil with different total S and labile S contents were reacted under similar conditions. The results show that the initial presence of organic or inorganic sulfur compounds increases the rate of TSR. However, organic sulfur compounds, such as 1-pentanethiol or diethyldisulfide, were significantly more effective in increasing the rate of TSR than H2S or elemental sulfur (on a mole S basis). The increase in rate is achieved at relatively low concentrations of 1-pentanethiol, less than 1 wt% of the total n-octane, which is comparable to the concentration of organic S that is common in many oils (???0.3 wt%). We examined several potential reaction mechanisms to explain the observed reactivity of organic LSC. First, the release of H2S from the thermal degradation of thiols was discounted as an important mechanism due to the significantly greater reactivity of thiol compared to an equivalent amount of H2S. Second, we considered the generation of olefines in association with the elimination of H2S during thermal degradation of thiols because olefines are much more reactive than n-alkanes during TSR. In our experiments, olefines increased the rate of TSR, but were less effective than 1-pentanethiol and other organic LSC. Third, the thermal decomposition of

  9. Global rates of marine sulfate reduction and implications for sub-sea-floor metabolic activities

    Science.gov (United States)

    Bowles, Marshall W.; Mogollón, José M.; Kasten, Sabine; Zabel, Matthias; Hinrichs, Kai-Uwe

    2014-05-01

    Sulfate reduction is a globally important redox process in marine sediments, yet global rates are poorly quantified. We developed an artificial neural network trained with 199 sulfate profiles, constrained with geomorphological and geochemical maps to estimate global sulfate-reduction rate distributions. Globally, 11.3 teramoles of sulfate are reduced yearly (~15% of previous estimates), accounting for the oxidation of 12 to 29% of the organic carbon flux to the sea floor. Combined with global cell distributions in marine sediments, these results indicate a strong contrast in sub-sea-floor prokaryote habitats: In continental margins, global cell numbers in sulfate-depleted sediment exceed those in the overlying sulfate-bearing sediment by one order of magnitude, whereas in the abyss, most life occurs in oxic and/or sulfate-reducing sediments.

  10. Model identification with BPNN on restrictive ecological factors of SRB for sulfate-reduction

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The model of back-propagation neural network(BPNN)was presented to demonstrate the effect of restrictive ecological factors,COD/SO42-ratio,pH value,alkalinity(ALK)and SO42-loading rate(Ns),on sulfate-reduction of Sulfate Reducing Bacteria(SRB)in an acidogenic sulfate-reducing reactor supplied with molasses as sole organic carbon source and sodium sulfate as electron acceptor.The compare of experimental results and computer simulation was also discussed.It was shown that the method of BPNN had a powerful ability to analyze the ecological characteristic of acidogenic sulfate-reducing ecosystem quantitatively.

  11. Reductive and sorptive properties of sulfate green rust (GRSO4)

    DEFF Research Database (Denmark)

    Nedel, Sorin

    The Fe(II), Fe(III) hydroxide containing sulfate in its structure, called sulfate green rust (GRSO4), can effectively reduce and convert contaminants to less mobile and less toxic forms. However, the ability of GRSO4 to remove positively charged species from solution, via sorption, is very limited...

  12. Anaerobic degradation of landfill leachate using an upflow anaerobic fixed-bed reactor with microbial sulfate reduction.

    Science.gov (United States)

    Thabet, Olfa Ben Dhia; Bouallagui, Hassib; Cayol, Jean-luc; Ollivier, Bernard; Fardeau, Marie-Laure; Hamdi, Moktar

    2009-08-15

    This study evaluated the anaerobic degradation of landfill leachate and sulfate reduction as a function of COD/(SO(4)(2-)) ratio in an upflow anaerobic fixed-bed reactor. The reactor, which was inoculated with a mixed consortium, was operated under a constant hydraulic retention time (HRT) of 5 days. We investigated the effect of COD/(SO(4)(2-)) ratio variation on the sulfate reduction efficiency, hydrogen sulfide production, chemical oxygen demand (COD) removal, conductivity, and pH variation. The best reactor performance, with significant sulfate reduction efficiency and COD removal efficiency of 91% and 87%, respectively, was reached under a COD/(SO(4)(2-)) ratio of 1.17. Under these conditions, microscopic analysis showed the abundance of vibrios and rod-shaped bacterial cells. Two anaerobic bacteria were isolated from the reactor sludge. Phylogenetic studies performed on these strains identified strain A1 as affiliated to Clostridium genus and strain H1 as a new species of sulfate-reducing bacteria affiliated to the Desulfovibrio genus. The closest phylogenetic relative of strain H1 was Desulfovibrio desulfuricans, at 96% similarity for partial 16S RNA gene sequence data. Physiological and metabolic characterization was performed for this strain.

  13. In Situ Rates of Sulfate Reduction in Response to Geochemical Perturbations

    Science.gov (United States)

    Kneeshaw, T.A.; McGuire, J.T.; Cozzarelli, I.M.; Smith, E.W.

    2011-01-01

    Rates of in situ microbial sulfate reduction in response to geochemical perturbations were determined using Native Organism Geochemical Experimentation Enclosures (NOGEEs), a new in situ technique developed to facilitate evaluation of controls on microbial reaction rates. NOGEEs function by first trapping a native microbial community in situ and then subjecting it to geochemical perturbations through the introduction of various test solutions. On three occasions, NOGEEs were used at the Norman Landfill research site in Norman, Oklahoma, to evaluate sulfate-reduction rates in wetland sediments impacted by landfill leachate. The initial experiment, in May 2007, consisted of five introductions of a sulfate test solution over 11 d. Each test stimulated sulfate reduction with rates increasing until an apparent maximum was achieved. Two subsequent experiments, conducted in October 2007 and February 2008, evaluated the effects of concentration on sulfate-reduction rates. Results from these experiments showed that faster sulfate-reduction rates were associated with increased sulfate concentrations. Understanding variability in sulfate-reduction rates in response to perturbations may be an important factor in predicting rates of natural attenuation and bioremediation of contaminants in systems not at biogeochemical equilibrium. Copyright ?? 2011 The Author(s). Journal compilation ?? 2011 National Ground Water Association.

  14. The Microbial Metabolic Characteristics in the Course of Sulfate-Reduction

    Institute of Scientific and Technical Information of China (English)

    2004-01-01

    Acid-producing phase reactor of two-phase anaerobic treatment process has remarkable advantages treating sulfate-laden wastewater. In order to investigate SRB population's capability of utilizing substrate and the microbial acidification type formed during the course of sulfate reduction, continuous-flow and batch tests were conducted in a continuous stirred tank bio-film reactor supplied with sodium sulfate as electron acceptor. The experimental results demonstrated that the acidification type formed b...

  15. Effects of bacterially produced precipitates on the metabolism of sulfate reducing bacteria during the bio-treatment process of copper-containing wastewater

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    A large volume of bacterially produced precipitates are generated during the bio-treatment of heavy metal wastewater.The composition of the bacterially produced precipitates and its effects on sulfate reducing bacteria (SRB) in copper-containing waste stream were evaluated in this study.The elemental composition of the microbial precipitate was studied using electrodispersive X-ray spectroscopy (EDX),and it was found that the ratio of S:Cu was 1.12.Combining with the results of copper distribution in the SRB metabolism culture,which was analyzed by the sequential extraction procedure,copper in the precipitates was determined as covellite (CuS).The bacterially produced precipitates caused a decrease of the sulfate reduction rate,and the more precipitates were generated,the lower the sulfate reduction rate was.The particle sizes of bacterially generated covellite were ranging from 0.03 to 2 m by particles size distribution (PSD) analysis,which was smaller than that of the SRB cells.Transmission electron microscopy (TEM) analysis showed that the microbial covellite was deposited on the surface of the cell.The effects of the microbial precipitate on SRB metabolism were found to be weakened by increasing the precipitation time and adding microbial polymeric substances in later experiments.These results provided direct evidence that the SRB activity was inhibited by the bacterially produced covellite,which enveloped the bacterium and thus affected the metabolism of SRB on mass transfer.

  16. Cathodic biofilm activates electrode surface and achieves efficient autotrophic sulfate reduction

    NARCIS (Netherlands)

    Pozo, Guillermo; Jourdin, Ludovic; Lu, Yang; Keller, Jürg; Ledezma, Pablo; Freguia, Stefano

    2016-01-01

    Recent evidence suggests that autotrophic sulfate reduction could be driven by direct and indirect electron transfer mechanisms in bioelectrochemical systems. However, much uncertainty still exists about the electron fluxes from the electrode to the final electron acceptor sulfate during autotrop

  17. Role of sulfate reduction and methane production by organic carbon degradation ineutrophic fjord sediments (Limfjorden, Denmark)

    DEFF Research Database (Denmark)

    Jørgensen, Bo Barker; Parkes, R. John

    2010-01-01

    The anaerobic mineralization of buried organic matter through sulfate reduction and methanogenesis was studied in 2-m-long piston cores of organic-rich, silty-clay sediment from two sites in Limfjorden, Denmark. An extended sulfate-methane transition (SMT) zone was found at 1-1.5-m sediment depth...

  18. Biotechnological aspects of anaerobic oxidation of methane coupled to sulfate reduction

    NARCIS (Netherlands)

    Meulepas, R.J.W.

    2009-01-01

    Sulfate reduction (SR) can be used for the removal and recovery of metals and oxidized sulfur compounds from waste streams. Sulfate-reducing bacteria reduce oxidized sulfur compounds to sulfide. Subsequently, sulfide can precipitate dissolved metals or can be oxidized to elemental sulfur. Both metal

  19. Sulfate Reduction at Low Ph To Remediate Acid Mine Drainage

    NARCIS (Netherlands)

    Sánchez-Andrea, I.; Sanz, J.L.; Bijmans, M.F.M.; Stams, A.J.M.

    2014-01-01

    Industrial activities and the natural oxidation of metallic sulfide-ores produce sulfate-rich waters with low pH and high heavy metals content, generally termed acid mine drainage (AMD). This is of great environmental concern as some heavy metals are highly toxic. Within a number of possibilities, b

  20. Modelling Methane Production and Sulfate Reduction in Anaerobic Granular Sludge Reactor with Ethanol as Electron Donor

    Science.gov (United States)

    Sun, Jing; Dai, Xiaohu; Wang, Qilin; Pan, Yuting; Ni, Bing-Jie

    2016-10-01

    In this work, a mathematical model based on growth kinetics of microorganisms and substrates transportation through biofilms was developed to describe methane production and sulfate reduction with ethanol being a key electron donor. The model was calibrated and validated using experimental data from two case studies conducted in granule-based Upflow Anaerobic Sludge Blanket reactors. The results suggest that the developed model could satisfactorily describe methane and sulfide productions as well as ethanol and sulfate removals in both systems. The modeling results reveal a stratified distribution of methanogenic archaea, sulfate-reducing bacteria and fermentative bacteria in the anaerobic granular sludge and the relative abundances of these microorganisms vary with substrate concentrations. It also indicates sulfate-reducing bacteria can successfully outcompete fermentative bacteria for ethanol utilization when COD/SO42‑ ratio reaches 0.5. Model simulation suggests that an optimal granule diameter for the maximum methane production efficiency can be achieved while the sulfate reduction efficiency is not significantly affected by variation in granule size. It also indicates that the methane production and sulfate reduction can be affected by ethanol and sulfate loading rates, and the microbial community development stage in the reactor, which provided comprehensive insights into the system for its practical operation.

  1. Bacterial chromate reduction and product characterization

    Energy Technology Data Exchange (ETDEWEB)

    Mehlhorn, R.J. [Lawrence Berkeley Lab., CA (United States); Buchanan, B.B.; Leighton, T. [California Univ., Berkeley, CA (United States)

    1992-11-01

    Bacillus subtilis reduced hexavalent chromate to trivalent chromium under either aerobic or anaerobic conditions. Reduction of CR(VI) and appearance of extracellular Cr(III) were demonstrated by electron spin resonance and spectrophotometry. Chromate reduction was stimulated more than five-fold by freeze-thawing, indicating that intracellular reductases or chemical reductants reduce chromate more rapidly than do intact cells. Moderately concentrated cells (10% pellet volume after centrifugation) reduced approximately 40 {mu}M chromate/min (2 mg Cr/1-min) when exposed to 100 {mu}M chromate (5 mg Cr/1). Highly concentrated cells (70% pellet volume) reduced more than 99.8% of 2 mM chromate (100 mg Cr/1) within 15 min. This rate of chromate reduction was of the same order of magnitude as the rate of respiration in aerobic cells. A substantial fraction of the reduction product (ca. 75%) was extracellular Cr(M), which could readily be separated from the cells by centrifugation. At high chromate concentrations, some fraction of reduced CR(VI) appeared to be taken up by cells, consistent with a detection of intracellular paramagnetic products. At low chromate concentrations, undefined growth medium alone reduced Cr(VI), but at a slow rate, relative to cells. Under appropriate conditions, B. subtilis appears to be an organism of choice for detoxifying chromate-contaminated soil and water.

  2. A biofilm model to understand the onset of sulfate reduction in denitrifying membrane biofilm reactors.

    Science.gov (United States)

    Tang, Youneng; Ontiveros-Valencia, Aura; Feng, Liang; Zhou, Chen; Krajmalnik-Brown, Rosa; Rittmann, Bruce E

    2013-03-01

    This work presents a multispecies biofilm model that describes the co-existence of nitrate- and sulfate-reducing bacteria in the H(2)-based membrane biofilm reactor (MBfR). The new model adapts the framework of a biofilm model for simultaneous nitrate and perchlorate removal by considering the unique metabolic and physiological characteristics of autotrophic sulfate-reducing bacteria that use H(2) as their electron donor. To evaluate the model, the simulated effluent H(2), UAP (substrate-utilization-associated products), and BAP (biomass-associated products) concentrations are compared to experimental results, and the simulated biomass distributions are compared to real-time quantitative polymerase chain reaction (qPCR) data in the experiments for parameter optimization. Model outputs and experimental results match for all major trends and explain when sulfate reduction does or does not occur in parallel with denitrification. The onset of sulfate reduction occurs only when the nitrate concentration at the fiber's outer surface is low enough so that the growth rate of the denitrifying bacteria is equal to that of the sulfate-reducing bacteria. An example shows how to use the model to design an MBfR that achieves satisfactory nitrate reduction, but suppresses sulfate reduction.

  3. Trace methane oxidation and the methane dependency of sulfate reduction in anaerobic granular sludge

    KAUST Repository

    Meulepas, Roel J.W.

    2010-05-01

    This study investigates the oxidation of labeled methane (CH4) and the CH4 dependence of sulfate reduction in three types of anaerobic granular sludge. In all samples, 13C-labeled CH4 was anaerobically oxidized to 13C-labeled CO2, while net endogenous CH4 production was observed. Labeled-CH4 oxidation rates followed CH4 production rates, and the presence of sulfate hampered both labeled-CH4 oxidation and methanogenesis. Labeled-CH4 oxidation was therefore linked to methanogenesis. This process is referred to as trace CH4 oxidation and has been demonstrated in methanogenic pure cultures. This study shows that the ratio between labeled-CH4 oxidation and methanogenesis is positively affected by the CH4 partial pressure and that this ratio is in methanogenic granular sludge more than 40 times higher than that in pure cultures of methanogens. The CH4 partial pressure also positively affected sulfate reduction and negatively affected methanogenesis: a repression of methanogenesis at elevated CH4 partial pressures confers an advantage to sulfate reducers that compete with methanogens for common substrates, formed from endogenous material. The oxidation of labeled CH 4 and the CH4 dependence of sulfate reduction are thus not necessarily evidence of anaerobic oxidation of CH4 coupled to sulfate reduction. © 2010 Federation of European Microbiological Societies.

  4. Thermochemical sulfate reduction in deep petroleum reservoirs: a molecular approach; Thermoreduction des sulfates dans les reservoirs petroliers: approche moleculaire

    Energy Technology Data Exchange (ETDEWEB)

    Hanin, S.

    2002-11-01

    The thermochemical sulfate reduction (TSR) is a set of chemical reactions leading to hydrocarbon oxidation and production of carbon dioxide and sour gas (H{sub 2}S) which is observed in deep petroleum reservoirs enriched in anhydrites (calcium sulfate). Molecular and isotopic studies have been conducted on several crude oil samples to determine which types of compounds could have been produced during TSR. Actually, we have shown that the main molecules formed by TSR were organo-sulfur compounds. Indeed, sulfur isotopic measurements. of alkyl-di-benzothiophenes, di-aryl-disulfides and thia-diamondoids (identified by NMR or synthesis of standards) shows that they are formed during TSR as their value approach that of the sulfur of the anhydrite. Moreover, thia-diamondoids are apparently exclusively formed during this phenomenon and can thus be considered as true molecular markers of TSR. In a second part, we have investigated with laboratory experiments the formation mechanism of the molecules produced during TSR. A first model has shown that sulfur incorporation into the organic matter occurred with mineral sulfur species of low oxidation degree. The use of {sup 34}S allowed to show that the sulfates reduction occurred during these simulations. At least, some experiments on polycyclic hydrocarbons, sulfurized or not, allowed to establish that thia-diamondoids could be formed by acid-catalysed rearrangements at high temperatures in a similar way as the diamondoids. (author)

  5. Thermophilic Sulfate Reduction in Hydrothermal Sediment of Lake Tanganyika, East-Africa

    DEFF Research Database (Denmark)

    ELSGAARD, L.; PRIEUR, D.; MUKWAYA, GM;

    1994-01-01

    In environments with temperatures above 60 degrees C, thermophilic prokaryotes are the only metabolically active life-forms. By using the (SO42-)-S-35 tracer technique, we studied the activity of sulfate-reducing microorganisms (SRM) in hot sediment from a hydrothermal vent site in the northern...... part of freshwater Lake Tanganyika (East Africa). Incubation of slurry samples at 8 to 90 degrees C demonstrated meso- and thermophilic sulfate reduction with optimum temperatures of 34 to 45 degrees C and 56 to 65 degrees C, respectively, and with an upper temperature limit of 80 degrees C. Sulfate...... reduction was stimulated at all temperatures by the addition of short-chain fatty acids and benzoate or complex substrates (yeast extract and peptone). A time course experiment showed that linear thermophilic sulfate consumption occurred after a lag phase (12 h) and indicated the presence of a large...

  6. Acetate, lactate, propionate, and isobutyrate as electron donors for iron and sulfate reduction in Arctic marine sediments, Svalbard

    DEFF Research Database (Denmark)

    Finke, Niko; Vandieken, Verona; Jørgensen, Bo Barker

    2007-01-01

    the oxidized (0-2 cm) and the reduced (5-9 cm) zone. In the 0-2 cm layer, 2/3 of the mineralization could be attributed to sulfate reduction and 1/3 to iron reduction. In the 5-9 cm layer, sulfate reduction was the sole mineralization process. Acetate and lactate turnover rates were measured by radiotracer......The contribution of volatile fatty acids (VFA) as e--donors for anaerobic terminal oxidation of organic carbon through iron and sulfate reduction was studied in Arctic fjord sediment. Dissolved inorganic carbon, Fe2+, VFA concentrations, and sulfate reduction were monitored in slurries from....... Inhibition of sulfate reduction with selenate resulted in the accumulation of acetate, propionate, and isobutyrate. The acetate turnover rates determined by radiotracer and accumulation after inhibition were similar. VFA turnover accounted for 21% and 52% of the mineralization through sulfate reduction...

  7. Study of thermochemical sulfate reduction mechanism using compound specific sulfur isotope analysis

    Science.gov (United States)

    Meshoulam, Alexander; Ellis, Geoffrey S.; Said Ahmad, Ward; Deev, Andrei; Sessions, Alex L.; Tang, Yongchun; Adkins, Jess F.; Liu, Jinzhong; Gilhooly, William P.; Aizenshtat, Zeev; Amrani, Alon

    2016-09-01

    The sulfur isotopic fractionation associated with the formation of organic sulfur compounds (OSCs) during thermochemical sulfate reduction (TSR) was studied using gold-tube pyrolysis experiments to simulate TSR. The reactants used included n-hexadecane (n-C16) as a model organic compound with sulfate, sulfite, or elemental sulfur as the sulfur source. At the end of each experiment, the S-isotopic composition and concentration of remaining sulfate, H2S, benzothiophene, dibenzothiophene, and 2-phenylthiophene (PT) were measured. The observed S-isotopic fractionations between sulfate and BT, DBT, and H2S in experimental simulations of TSR correlate well with a multi-stage model of the overall TSR process. Large kinetic isotope fractionations occur during the first, uncatalyzed stage of TSR, 12.4‰ for H2S and as much as 22.2‰ for BT. The fractionations decrease as the H2S concentration increases and the reaction enters the second, catalyzed stage. Once all of the oxidizable hydrocarbons have been consumed, sulfate reduction ceases and equilibrium partitioning then dictates the fractionation between H2S and sulfate (∼17‰). Experiments involving sparingly soluble CaSO4 show that during the second catalytic phase of TSR the rate of sulfate reduction exceeds that of sulfate dissolution. In this case, there is no apparent isotopic fractionation between source sulfate and generated H2S, as all of the available sulfate is effectively reduced at all reaction times. When CaSO4 is replaced with fully soluble Na2SO4, sulfate dissolution is no longer rate limiting and significant S-isotopic fractionation is observed. This supports the notion that CaSO4 dissolution can lead to the apparent lack of fractionation between H2S and sulfate produced by TSR in nature. The S-isotopic composition of individual OSCs record information related to geochemical reactions that cannot be discerned from the δ34S values obtained from bulk phases such as H2S, oil, and sulfate minerals, and

  8. Enhancement of bacterial iron and sulfate respiration for in situ bioremediation of acid mine drainage sites: a case study

    Energy Technology Data Exchange (ETDEWEB)

    Bilgin, A.A.; Harrington, J.M.; Silverstein, J. [ARCADIS G& amp; M, Highlands Ranch, CO (United States)

    2007-08-15

    The prevention of acid mine drainage (AMD) in situ is more attractive than down-gradient treatment alternatives that do not involve source control. AMD source control can be achieved by shifting the microbial activity in the sulfidic rock from pyrite oxidation to anaerobic heterotrophic activity. This is achieved by adding biodegradable organic carbon amendments to the sulfidic rock. This technique was applied to an abandoned coal mine pool in Pennsylvania. The pool had a pH of 3.0 to 3.5. Following treatment, near-neutral pH and decreased effluent heavy metal concentrations were achieved. In situ bioremediation by the enhancement of bacterial iron and sulfate reduction is a promising technology for AMD prevention.

  9. Characterization of the sulfate uptake and assimilation pathway from Xanthomonas citri - targets for bacterial growth inhibitors

    Energy Technology Data Exchange (ETDEWEB)

    Tambascia, C.; Balan, A. [Laboratorio Nacional de Biociencias - LNBIO, Campinas, SP (Brazil)

    2012-07-01

    Full text: Microorganisms require sulfur for growth and obtain it either for inorganic sulfate or organosulfur compounds. ATP-Binding Cassete (SulT family) or major facilitator superfamily-type (SulP) transporters are responsible for the sulfate transport into the cell. In Xanthomonas citri, the phytopathogenic bacterium that causes the canker citrus disease, there are no reports related to the importance of these transporters during in vitro or in vivo infection. We identified in X. citri genome all the genes that belong to the well-characterized cys regulon from Escherichia coli and Salmonella typhimurium, which includes three ABC transporters and all the enzymes necessary for sulfate oxide reduction to sulfide and cysteine. Once these genes have been shown to be extremely important for bacteria growth and development in different environments, we chose the sbpcysWUA and cysDNCHIJG operons, which encodes the ABC inorganic sulfate ABC transporter and all the enzymes necessary for conversion of sulfate in cysteine, respectively. As a step for crystallization trials and resolution of their tridimensional structures, the referred genes were amplified and cloned into the cloning vector pGEM T-easy. In addition, using bioinformatics tools and molecular modeling we characterized all the protein functions as well as built tridimensional models of their structure for determination of the active sites. The importance of each protein is discussed aiming the discovery of a good target for development of inhibitors that could block the bacterium growth. (author)

  10. Seasonal influence on sulfate reduction and zinc sequestration in subsurface treatment wetlands.

    Science.gov (United States)

    Stein, Otto R; Borden-Stewart, Deborah J; Hook, Paul B; Jones, Warren L

    2007-08-01

    To characterize the effects of season, temperature, plant species, and chemical oxygen demand (COD) loading on sulfate reduction and metals removal in treatment wetlands we measured pore water redox potentials and concentrations of sulfate, sulfide, zinc and COD in subsurface wetland microcosms. Two batch incubations of 20 day duration were conducted in each of four seasons defined by temperature and daylight duration. Four treatments were compared: unplanted controls, Typha latifolia (broadleaf cattail), and Schoenoplectus acutus (hardstem bulrush), all at low COD loading (267 mg/L), plus bulrush at high COD loading (534 mg/L). Initial SO4-S and zinc concentrations were 67 and 24 mg/L, respectively. For all treatments, sulfate removal was least in winter (4 degrees C, plant dormancy) greatest in summer (24 degrees C, active plant growth) and intermediate in spring and fall (14 degrees C), but seasonal variation was greater in cattail, and especially, bulrush treatments. Redox measurements indicated that, in winter, plant-mediated oxygen transfer inhibited activity of sulfate reducing bacteria, exacerbating the reduction in sulfate removal due to temperature. Doubling the COD load in bulrush treatments increased sulfate removal by only 20-30% when averaged over all seasons and did not alter the basic pattern of seasonal variation, despite tempering the wintertime increase in redox potential. Seasonal and treatment effects on zinc removal were broadly consistent with sulfate removal and presumably reflected zinc-sulfide precipitation. Results strongly suggest that interactive effects of COD loading rate, temperature, season, and plant species control not only sulfate reduction and zinc sequestration, but also the balance of competition between various microbial consortia responsible for water treatment in constructed wetlands.

  11. Zero valent iron simultaneously enhances methane production and sulfate reduction in anaerobic granular sludge reactors.

    Science.gov (United States)

    Liu, Yiwen; Zhang, Yaobin; Ni, Bing-Jie

    2015-05-15

    Zero valent iron (ZVI) packed anaerobic granular sludge reactors have been developed for improved anaerobic wastewater treatment. In this work, a mathematical model is developed to describe the enhanced methane production and sulfate reduction in anaerobic granular sludge reactors with the addition of ZVI. The model is successfully calibrated and validated using long-term experimental data sets from two independent ZVI-enhanced anaerobic granular sludge reactors with different operational conditions. The model satisfactorily describes the chemical oxygen demand (COD) removal, sulfate reduction and methane production data from both systems. Results show ZVI directly promotes propionate degradation and methanogenesis to enhance methane production. Simultaneously, ZVI alleviates the inhibition of un-dissociated H2S on acetogens, methanogens and sulfate reducing bacteria (SRB) through buffering pH (Fe(0) + 2H(+) = Fe(2+) + H2) and iron sulfide precipitation, which improve the sulfate reduction capacity, especially under deterioration conditions. In addition, the enhancement of ZVI on methane production and sulfate reduction occurs mainly at relatively low COD/ [Formula: see text] ratio (e.g., 2-4.5) rather than high COD/ [Formula: see text] ratio (e.g., 16.7) compared to the reactor without ZVI addition. The model proposed in this work is expected to provide support for further development of a more efficient ZVI-based anaerobic granular system.

  12. Algae as an electron donor promoting sulfate reduction for the bioremediation of acid rock drainage.

    Science.gov (United States)

    Ayala-Parra, Pedro; Sierra-Alvarez, Reyes; Field, Jim A

    2016-11-05

    This study assessed bioremediation of acid rock drainage in simulated permeable reactive barriers (PRB) using algae, Chlorella sorokiniana, as the sole electron donor for sulfate-reducing bacteria. Lipid extracted algae (LEA), the residues of biodiesel production, were compared with whole cell algae (WCA) as an electron donor to promote sulfate-reducing activity. Inoculated columns containing anaerobic granular sludge were fed a synthetic medium containing H2SO4 and Cu(2+). Sulfate, sulfide, Cu(2+) and pH were monitored throughout the experiment of 123d. Cu recovered in the column packing at the end of the experiment was evaluated using sequential extraction. Both WCA and LEA promoted 80% of sulfate removal (12.7mg SO4(2-) d(-1)) enabling near complete Cu removal (>99.5%) and alkalinity generation raising the effluent pH to 6.5. No noteworthy sulfate reduction, alkalinity formation and Cu(2+) removal were observed in the endogenous control. In algae amended-columns, Cu(2+) was precipitated with biogenic H2S produced by sulfate reduction. Formation of CuS was evidenced by sequential extraction and X-ray diffraction. LEA and WCA provided similar levels of electron donor based on the COD balance. The results demonstrate an innovative passive remediation system using residual algae biomass from the biodiesel industry.

  13. Microbial sulfate reduction under sequentially acidic conditions in an upflow anaerobic packed bed bioreactor

    Energy Technology Data Exchange (ETDEWEB)

    Jong, T.; Parry, D.L. [Charles Darwin University, Darwin, NT (Australia). Faculty for Educational Health & Science

    2006-07-15

    The aim of this study was to operate an upflow anaerobic packed bed reactor (UAPB) containing sulfate reducing bacteria (SRB) under acidic conditions similar to those found in acid mine drainage (AMD). The UAPB was filled with sand and operated under continuous flow at progressively lower pH and was shown to be capable of supporting sulfate reduction at pH values of 6.0, 5.0, 4.5, 4.0 and 3.5 in a synthetic medium containing 53.5 mmol l{sup -1} lactate. Sulfate reduction rates of 553-1052 mmol m{sup -3} d{sup -1} were obtained when the influent solution pH was progressively lowered from pH 6.0 to 4.0, under an optimal flow rate of 2.61 ml min{sup -1}. When the influent pH was further lowered to pH 3.5, sulfate reduction was substantially reduced with only about 1% sulfate removed at a rate of 3.35 mmol m{sup -3} d{sup -1} after 20 days of operation. However, viable SRB were recovered from the column, indicating that the SRB population was capable of surviving and metabolizing at low levels even at pH 3.5 conditions for at least 20 days. The changes in conductivity in the SRB column did not always occur with changes in pH and redox potential, suggesting that conductivity measurements may be more sensitive to SRB activity and could be used as an additional tool for monitoring SRB activity. The bioreactor containing SRB was able to reduce sulfate and generate alkalinity even when challenged with influent as low as pH 3.5, indicating that such treatment systems have potential for bioremediating highly acidic, sulfate contaminated waste waters.

  14. Pathways and Microbiology of Thiosulfate Transformations and Sulfate Reduction in a Marine Sediment (Kattegat, Denmark)

    DEFF Research Database (Denmark)

    JØRGENSEN, BB; BAK, F.

    1991-01-01

    Reductive and oxidative pathways of the sulfur cycle were studied in a marine sediment by parallel radiotracer experiments with (SO4(2-))-S-35, (H2S)-S-35, and (S2O3(2-))-S-35 injected into undisturbed sediment cores. The distributions of viable populations of sulfate- and thiosulfate-reducing ba...

  15. METHANOGENESIS AND SULFATE REDUCTION IN CHEMOSTATS: II. MODEL DEVELOPMENT AND VERIFICATION

    Science.gov (United States)

    A comprehensive dynamic model is presented that simulates methanogenesis and sulfate reduction in a continuously stirred tank reactor (CSTR). This model incorporates the complex chemistry of anaerobic systems. A salient feature of the model is its ability to predict the effluent ...

  16. A New Model for Electron Flow for Sulfate Reduction in Desulfovibrio alaskensis G20

    Energy Technology Data Exchange (ETDEWEB)

    Keller, Kimberly L [University of Missouri, Columbia; Rapp-Giles, Barbara J [University of Missouri, Columbia; Semkiw, Elizabeth M. [University of Missouri; Porat, Iris [ORNL; Brown, Steven D [ORNL; Wall, Judy D. [University of Missouri

    2013-01-01

    To understand the energy conversion activities of the anaerobic sulfate-reducing bacteria, it is necessary to identify the components involved in electron flow. The importance of the abundant type I tetraheme cytochrome c3 (TpIc3) as an electron carrier during sulfate respiration was questioned by the previous isolation of a null mutation in the encoding gene, cycA, in Desulfovibrio alaskensis G20. Whereas respiratory growth of the CycA mutant with lactate and sulfate was little affected, growth with pyruvate and sulfate was significantly impaired. We have explored the phenotype of the CycA mutant through physiological tests and transcriptomic and proteomic analyses. Data reported here show that electrons from pyruvate oxidation do not reach adenylyl sulfate reductase, the enzyme catalyzing the first redox reaction during sulfate reduction, in the absence of either CycAor the type I cytochrome c3:menaquinone oxidoreductase, QrcABCD transmembrane complex. In contrast to the wild type, neither CycA and QrcA mutants do not grow with H2 or formate and sulfate as electron acceptor. Transcriptomic and proteomic analyses of the CycA mutant showed that transcripts and enzymes for the pathway from pyruvate to succinate were strongly decreased in the CycA mutant regardless of growth mode. Neither the CycA nor the QrcA mutant grew on fumarate alone, consistent with the omics results and a redox regulation of gene expression. We conclude that TpIc3 and the Qrc complex are essential D. alaskensis components for transfer of electrons released in the periplasm to reach the cytoplasmic adenylyl sulfate reductase and present a model that may explain the CycA phenotype through confurcation of electrons.

  17. New Model for Electron Flow for Sulfate Reduction in Desulfovibrio alaskensis G20

    Energy Technology Data Exchange (ETDEWEB)

    Keller, Kimberly L.; Rapp-Giles, Barbara J.; Semkiw, Elizabeth S.; Porat, Iris; Brown, Steven D.; Wall, Judy D.

    2014-02-01

    To understand the energy conversion activities of the anaerobic sulfate-reducing bacteria, it is necessary to identify the components involved in electron flow. The importance of the abundant type I tetraheme cytochrome c3 (TpIc3) as an electron carrier during sulfate respiration was questioned by the previous isolation of a null mutation in the gene encoding TpIc3, cycA, in Desulfovibrio alaskensis G20. Whereas respiratory growth of the CycA mutant with lactate and sulfate was little affected, growth with pyruvate and sulfate was significantly impaired. We have explored the phenotype of the CycA mutant through physiological tests and transcriptomic and proteomic analyses. Data reported here show that electrons from pyruvate oxidation do not reach adenylyl sulfate reductase, the enzyme catalyzing the first redox reaction during sulfate reduction, in the absence of either CycA or the type I cytochrome c3:menaquinone oxidoreductase transmembrane complex, QrcABCD. In contrast to the wild type, the CycA and QrcA mutants did not grow with H2 or formate and sulfate as the electron acceptor. Transcriptomic and proteomic analyses of the CycA mutant showed that transcripts and enzymes for the pathway from pyruvate to succinate were strongly decreased in the CycA mutant regardless of the growth mode. Neither the CycA nor the QrcA mutant grew on fumarate alone, consistent with the omics results and a redox regulation of gene expression. We conclude that TpIc3 and the Qrc complex are D. alaskensis components essential for the transfer of electrons released in the periplasm to reach the cytoplasmic adenylyl sulfate reductase and present a model that may explain the CycA phenotype through confurcation of electrons.

  18. New Model for Electron Flow for Sulfate Reduction in Desulfovibrio alaskensis G20

    Energy Technology Data Exchange (ETDEWEB)

    Rapp-Giles, Barbara J [University of Missouri, Columbia; Keller, Kimberly L [University of Missouri, Columbia; Porat, Iris [ORNL; Brown, Steven D [ORNL; Semkiw, Elizabeth M. [University of Missouri; Wall, Judy D. [University of Missouri

    2014-01-01

    To understand the energy conversion activities of the anaerobic sulfate-reducing bacteria, it is necessary to identify the components involved in electron flow. The importance of the abundant type I tetraheme cytochrome c3 (TpIc3) as an electron carrier during sulfate respiration was questioned by the previous isolation of a null mutation in the gene encoding TpIc3, cycA, in Desulfovibrio alaskensis G20. Whereas respiratory growth of the CycA mutant with lactate and sulfate was little affected, growth with pyruvate and sulfate was significantly impaired. We have explored the phenotype of the CycA mutant through physiological tests and transcriptomic and proteomic analyses. Data reported here show that electrons from pyruvate oxidation do not reach adenylyl sulfate reductase, the enzyme catalyzing the first redox reaction during sulfate reduction, in the absence of either CycA or the type I cytochrome c3:menaquinone oxidoreductase transmembrane complex, QrcABCD. In contrast to the wild type, the CycA and QrcA mutants did not grow with H2 or formate and sulfate as the electron acceptor. Transcriptomic and proteomic analyses of the CycA mutant showed that transcripts and enzymes for the pathway from pyruvate to succinate were strongly decreased in the CycA mutant regardless of the growth mode. Neither the CycA nor the QrcA mutant grew on fumarate alone, consistent with the omics results and a redox regulation of gene expression. We conclude that TpIc3 and the Qrc complex are D. alaskensis components essential for the transfer of electrons released in the periplasm to reach the cytoplasmic adenylyl sulfate reductase and present a model that may explain the CycA phenotype through confurcation of electrons.

  19. Influence of nitrate and sulfate reduction in the bioelectrochemically assisted dechlorination of cis-DCE.

    Science.gov (United States)

    Lai, Agnese; Verdini, Roberta; Aulenta, Federico; Majone, Mauro

    2015-04-01

    This paper investigated the reductive dechlorination (RD) of cis-dichloroethylene (cis-DCE) (average influent 14.2±0.7 μM) by a bioelectrochemical system (BES), in the presence of real contaminated groundwater containing high levels of nitrate and sulfate. The BES enhanced both the RD and competing reactions, such as nitrate and sulfate reductions, which occurred with neither an external organic carbon source nor any inoculum other than the indigenous microbial consortia in the real groundwater. In preliminary batch tests, RD and full nitrate removal occurred after a short lag phase, whereas sulfate reduction occurred slowly and alongside the RD. Under continuous flow conditions (hydraulic retention time, HRT, 1.4 d), the competition of different electron acceptors was strongly affected by the cathodic potential in the range -550 to -750 mV vs. standard hydrogen electrode (SHE). Nitrate reduction was driven to completion at all tested cathodic potentials, whereas sulfate reduction and the RD rate increased as the cathodic potential became more negative. At -750 mV vs. SHE, strong methanogenesis was also observed and became the most important sink of electrons. The overall coulombic efficiency decreased while the potential became more negative. The RD contribution was always less than 1%. Hence, greater energy consumption was required to obtain higher RD rate and better conversion. Anodic oxidation was only observed at -750 mV vs. SHE where almost 39% of residual vinyl chloride (VC) was oxidized and the sulfate was formed back from sulfide (further contributing to electric waste).

  20. Selective catalytic reduction system and process using a pre-sulfated zirconia binder

    Science.gov (United States)

    Sobolevskiy, Anatoly; Rossin, Joseph A.

    2010-06-29

    A selective catalytic reduction (SCR) process with a palladium catalyst for reducing NOx in a gas, using hydrogen as a reducing agent is provided. The process comprises contacting the gas stream with a catalyst system, the catalyst system comprising (ZrO.sub.2)SO.sub.4, palladium, and a pre-sulfated zirconia binder. The inclusion of a pre-sulfated zirconia binder substantially increases the durability of a Pd-based SCR catalyst system. A system for implementing the disclosed process is further provided.

  1. Role of aqueous sulfide and sulfate-reducing bacteria in the kinetics and mechanisms of the reduction of uranyl ion

    Energy Technology Data Exchange (ETDEWEB)

    Mohagheghi, A.

    1985-01-01

    Formation of sedimentary rock-hosted uranium ore deposits is thought to have resulted from the reduction by aqueous sulfide species of relatively soluble uranyl ion (U(VI)) to insoluble uranium(IV) oxides and silicates. The origin of this H/sub 2/S in such deposits can be either biogenic or abiogenic. Therefore, the kinetics and mechanism of uranyl ion reduction by aqueous sulfide, and the effect of several key variables on the reduction process in non-bacterial (sterile) systems was studied. The role of both pure and mixed cultures of sulfate-reducing bacteria on the reduction process was also investigated. In sterile systems the reduction reaction generally occurred by a two step reaction sequence. Uranium(V) (as UO/sub 2//sup +/) and U(IV) (as UO/sub 2/ the mineral uraninite) were the intermediate and final products, respectively. The initial concentration of uranyl ion required for reaction initiation had a minimum value of 0.8 ppm at pH 7, and was higher at pH values less than or greater than 7. An induction period was observed in all experiments. No reduction was observed after 8 hours at pH 8. Although increasing ionic strength increased the length of the induction period, it also increased the rate of the reduction of UO/sub 2//sup +/ in the second step. No reaction was observed under any experimental conditions with initial UO/sub 2//sup 2 +/ concentration less than 0.1 ppm, which is thought to be typical for ore forming solutions. However, by absorbing uranyl ion onto kaolinite, the reduction by H/sub 2/S occurred at lower UO/sub 2//sup 2 +/ concentrations (approx. 0.1 ppm) in that in the homogeneous system. Thus, adsorption may play a significant role in the reduction and therefore in the formation of ore deposits.

  2. Kinetics of microbially mediated reactions: dissimilatory sulfate reduction in saltmarsh sediments (Sapelo Island, Georgia, USA)

    Science.gov (United States)

    Roychoudhury, Alakendra N.; Van Cappellen, Philippe; Kostka, Joel E.; Viollier, Eric

    2003-04-01

    A sediment disk reactor was tested in once flow-through mode to retrieve kinetic parameters for the Monod rate law that describes sulfate reduction. The experimental method was compared with a previously described procedure by the authors where a sediment plug-flow reactor was operated in a recirculation mode. In recirculation mode, accumulation of metabolic byproducts in certain cases may result in negative feedback, thus preventing accurate determination of kinetic information. The method described in this article provides an alternative to the recirculation sediment plug-flow-through reactor technique for retrieving kinetic parameters of microbially mediated reactions in aquatic sediments. For sulfate reduction in a saltmarsh site, a maximum estimate of the half-saturation concentration, Ks, of 204±26 μM and a maximum reaction rate, Rm, of 2846±129 nmol cm( wet sediment ) 3 d-1 was determined. The Ks value obtained was consistent with the one estimated previously (K s=240±20 μM) from a different site within the same saltmarsh mud flat using a recirculating reactor. From the Rm value and reduction rates determined using 35SO 42- incubation experiments, we infer that sulfate reduction is limited in the field. Substrate availability is not the main contributor for the limitation, however. Competition from other microbes, such as iron reducers affects the activity of sulfate reducers in the suboxic to anoxic zones, whereas aerobes compete in the oxic zone. High sulfide concentration in the pore water may also have acted as a toxin to the sulfate reducers in the field.

  3. Methanogenesis and sulfate reduction in chemostats: A fundamental experimental kinetic study and modeling. Report for 1992-1993

    Energy Technology Data Exchange (ETDEWEB)

    Gupta, A.; Flora, J.R.V.; Gupta, M.; Sayles, G.D.; Suidan, M.T.

    1993-01-01

    Six chemostats containing mixed anaerobic cultures were used to investigate interactions between sulfate reduction and methanogenesis for three substrates: acetic acid, methanol, and formic acid. Sulfate reducers outcompeted methanogens for acetic acid while methanol was not utilized by sulfate reducers. For the chemostat with formic acid feed, competition was observed between methanogens and sulfate reducers with 62% and 24% of the substrate utilized by sulfate reduction and methanogenesis, respectively. A comprehensive dynamic model was developed that simulates methanogenesis and sulfate reduction in a chemostat. The model incorporates the complex chemistry of anaerobic systems and was able to predict both the steady state and the batch tests reasonably well. (Copyright (c) 1993 Water Environment Federation.)

  4. Volumetric determination of uranium using titanous sulfate as reductant before oxidimetric titration

    Science.gov (United States)

    Wahlberg, James S.; Skinner, Dwight L.; Rader, Lewis F.

    1956-01-01

    A new method for determining uranium in samples containing 0.05 percent or more U3O8, using titanous sulfate as reducing agent, is much shorter, faster, and has fewer interferences than conventional methods using reductor columns. The sample is dissolved with sulfuric, nitric, perchloric, and hydrofluoric acids. Elements that would otherwise form insoluble fluorides are kept in solution by complexing the fluoride ion with boric acid. A precipitation is made with cupferron to remove interfering elements. The solution is filtered to remove the precipitated cupferrates instead of extracting them with chloroform as is usually done. Filtration is preferred to extraction because any niobium that may be in solution forms an insoluble cupferrate that may be removed by filtering but is very difficult to extract with chloroform. Excess cupferron is destroyed by oxidizing with nitric and perchloric acids, and evaporating to dense fumes of sulfuric acid. The uranium is reduced to U(IV) by the addition of titanous sulfate, with cupric sulfate used as an indicator of the completeness of the reduction. Metallic copper is formed when all the uranium is reduced. The reduced copper is then reoxidized by the addition of mercuric perchlorate, an excess of ferric sulfate added, and the solution titrated immediately with standard ceric sulfate with ferroin as an indicator. Precision of the method compared favorable with methods in common use, both for uranium ores and for most types of uranium-rich materials.

  5. Sulfate reduction and copper precipitation by a Citrobacter sp. isolated from a mining area

    Energy Technology Data Exchange (ETDEWEB)

    Qiu Rongliang, E-mail: eesqrl@mail.sysu.edu.cn [School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510275 (China)] [Guangdong Provincial Key Laboratory for Environmental Pollution Control and Remediation Technology, Guangzhou 510275 (China); Zhao Benliang; Liu Jinling [School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510275 (China); Huang, Xiongfei [School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510275 (China)] [Guangdong Provincial Key Laboratory for Environmental Pollution Control and Remediation Technology, Guangzhou 510275 (China); Li, Qingfei [School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510275 (China); Brewer, Eric [Viridian Environmental LLC, VA 22207 (United States); Wang, Shizhong; Shi, Ning [School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510275 (China)

    2009-05-30

    A strain of sulfate-reducing bacteria, designated strain 'DBM', was isolated from sediments of a mining area. Phylogenetic analysis of the 16S rRNA gene sequence of the isolate revealed that it was related to members of the genus Citrobacter, with C. AzoR-4, C. freundii, C. braakii and C. werkmanii being the most closely related species (sequence similarity up to 98%). Few studies have been done on sulfate reduction ability in Citrobacter. Electron microscopy studies showed that the morphology of the strain DBM was rod-shaped. Strain DBM reduced 10 mM of sulfate completely to sulfide within 7 d, and it recovered its sulfate reduction ability after 7 d of aerobic growth. Furthermore, strain DBM effectively precipitated 0.40 mM copper during its growth. Elemental composition of the resulting microbial precipitate was studied using electro-dispersive X-ray spectroscopy, and it was found that the ratio of S:Cu was 1.07. The result was consistent with the formation of copper sulfide. Heavy metal precipitation by Citrobacter sp. strain DBM was a phenomenon that may be useful in the bioremediation of acid mine drainage.

  6. Inhibition of bacterial oxidation of ferrous iron by lead nitrate in sulfate-rich systems

    Science.gov (United States)

    Wang, Hongmei; Gong, Linfeng; Cravotta, Charles A.; Yang, Xiaofen; Tuovinen, Olli H.; Dong, Hailiang; Fu, Xiang

    2013-01-01

    Inhibition of bacterial oxidation of ferrous iron (Fe(II)) by Pb(NO3)2 was investigated with a mixed culture of Acidithiobacillus ferrooxidans. The culture was incubated at 30 °C in ferrous-sulfate medium amended with 0–24.2 mM Pb(II) added as Pb(NO3)2. Anglesite (PbSO4) precipitated immediately upon Pb addition and was the only solid phase detected in the abiotic controls. Both anglesite and jarosite (KFe3(SO4)2(OH)6) were detected in inoculated cultures. Precipitation of anglesite maintained dissolved Pb concentrations at 16.9–17.6 μM regardless of the concentrations of Pb(NO3)2 added. Fe(II) oxidation was suppressed by 24.2 mM Pb(NO3)2 addition even when anglesite was removed before inoculation. Experiments with 0–48 mM KNO3 demonstrated that bacterial Fe(II) oxidation decreased as nitrate concentration increased. Therefore, inhibition of Fe(II) oxidation at 24.2 mM Pb(NO3)2 addition resulted from nitrate toxicity instead of Pb addition. Geochemical modeling that considered the initial precipitation of anglesite to equilibrium followed by progressive oxidation of Fe(II) and the precipitation of jarosite and an amorphous iron hydroxide phase, without allowing plumbojarosite to precipitate were consistent with the experimental time-series data on Fe(II) oxidation under biotic conditions. Anglesite precipitation in mine tailings and other sulfate-rich systems maintains dissolved Pb concentrations below the toxicity threshold of A. ferrooxidans.

  7. Kinetics of uncatalyzed thermochemical sulfate reduction by sulfur-free paraffin

    Science.gov (United States)

    Zhang, Tongwei; Ellis, Geoffrey S.; Ma, Qisheng; Amrani, Alon; Tang, Yongchun

    2012-01-01

    To determine kinetic parameters of sulfate reduction by hydrocarbons (HC) without the initial presence of low valence sulfur, we carried out a series of isothermal gold-tube hydrous-pyrolysis experiments at 320, 340, and 360 °C under a constant confined pressure of 24.1 MPa. The reactants used consisted of saturated HC (sulfur-free) and CaSO4 in an aqueous solution buffered to three different pH conditions without the addition of elemental sulfur (S8) or H2S as initiators. H2S produced in the course of reaction was proportional to the extent of the reduction of CaSO4 that was initially the only sulfur-containing reactant. Our results show that the in situ pH of the aqueous solution (herein, in situ pH refers to the calculated pH value of the aqueous solution at certain experimental conditions) can significantly affect the rate of the thermochemical sulfate reduction (TSR) reaction. A substantial increase in the TSR reaction rate was observed with a decrease in the in situ pH. Our experimental results show that uncatalyzed TSR is a first-order reaction. The temperature dependence of experimentally measured H2S yields from sulfate reduction was fit with the Arrhenius equation. The determined activation energy for HC (sulfur-free) reacting with View the MathML sourceHSO4− in our experiments is 246.6 kJ/mol at pH values ranging from 3.0 to 3.5, which is slightly higher than the theoretical value of 227.0 kJ/mol using ab initio quantum chemical calculations on a similar reaction. Although the availability of reactive sulfate significantly affects the rate of reaction, a consistent rate constant was determined by accounting for the HSO4− ion concentration. Our experimental and theoretical approach to the determination of the kinetics of TSR is further validated by a reevaluation of several published experimental TSR datasets without the initial presence of native sulfur or H2S. When the effect of reactive sulfate concentration is appropriately accounted for, the

  8. Geomicrobiological linkages between short-chain alkane consumption and sulfate reduction rates in seep sediments.

    Science.gov (United States)

    Bose, Arpita; Rogers, Daniel R; Adams, Melissa M; Joye, Samantha B; Girguis, Peter R

    2013-01-01

    Marine hydrocarbon seeps are ecosystems that are rich in methane, and, in some cases, short-chain (C2-C5) and longer alkanes. C2-C4 alkanes such as ethane, propane, and butane can be significant components of seeping fluids. Some sulfate-reducing microbes oxidize short-chain alkanes anaerobically, and may play an important role in both the competition for sulfate and the local carbon budget. To better understand the anaerobic oxidation of short-chain n-alkanes coupled with sulfate-reduction, hydrocarbon-rich sediments from the Gulf of Mexico (GoM) were amended with artificial, sulfate-replete seawater and one of four n-alkanes (C1-C4) then incubated under strict anaerobic conditions. Measured rates of alkane oxidation and sulfate reduction closely follow stoichiometric predictions that assume the complete oxidation of alkanes to CO2 (though other sinks for alkane carbon likely exist). Changes in the δ(13)C of all the alkanes in the reactors show enrichment over the course of the incubation, with the C3 and C4 incubations showing the greatest enrichment (4.4 and 4.5‰, respectively). The concurrent depletion in the δ(13)C of dissolved inorganic carbon (DIC) implies a transfer of carbon from the alkane to the DIC pool (-3.5 and -6.7‰ for C3 and C4 incubations, respectively). Microbial community analyses reveal that certain members of the class Deltaproteobacteria are selectively enriched as the incubations degrade C1-C4 alkanes. Phylogenetic analyses indicate that distinct phylotypes are enriched in the ethane reactors, while phylotypes in the propane and butane reactors align with previously identified C3-C4 alkane-oxidizing sulfate-reducers. These data further constrain the potential influence of alkane oxidation on sulfate reduction rates (SRRs) in cold hydrocarbon-rich sediments, provide insight into their contribution to local carbon cycling, and illustrate the extent to which short-chain alkanes can serve as electron donors and govern microbial community

  9. Geomicrobiological linkages between short-chain alkane consumption and sulfate reduction rates in seep sediments.

    Directory of Open Access Journals (Sweden)

    Arpita eBose

    2013-12-01

    Full Text Available Marine hydrocarbon seeps are ecosystems that are rich in methane, and, in some cases, short-chain (C2-C5 and longer alkanes. C2-C4 alkanes such as ethane, propane and butane can be significant components of seeping fluids. Some sulfate-reducing microbes oxidize short-chain alkanes anaerobically, and may play an important role in both the competition for sulfate and the local carbon budget. To better understand the anaerobic oxidation of short-chain n-alkanes coupled with sulfate-reduction, hydrocarbon-rich sediments from the Gulf of Mexico were amended with artificial, sulfate-replete seawater and one of four n-alkanes (C1-C4 then incubated under strict anaerobic conditions. Measured rates of alkane oxidation and sulfate reduction closely follow stoichiometric predictions that assume the complete oxidation of alkanes to CO2 (though other sinks for alkane carbon likely exist. Changes in the δ13C of all the alkanes in the reactors show enrichment over the course of the incubation, with the C3 and C4 incubations showing the greatest enrichment (4.4‰ and 4.5‰ respectively. The concurrent depletion in the δ13C of dissolved inorganic carbon (DIC implies a transfer of carbon from the alkane to the DIC pool (-3.5 and -6.7‰ for C3 and C4 incubations, respectively. Microbial community analyses reveal that certain members of the class Deltaproteobacteria are selectively enriched as the incubations degrade C1-C4 alkanes. Phylogenetic analyses indicate that distinct phylotypes are enriched in the ethane reactors, while phylotypes in the propane and butane reactors align with previously identified C3-C4 alkane-oxidizing sulfate-reducers. These data further constrain the potential influence of alkane oxidation on sulfate reduction rates in cold hydrocarbon-rich sediments, provide insight into their contribution to local carbon cycling, and illustrate the extent to which short-chain alkanes can serve as electron donors and govern microbial community

  10. Bacterial Reduction Of Barium Sulphate By Sulphate-Reducing Bacteria

    Directory of Open Access Journals (Sweden)

    Luptáková Alena

    2015-12-01

    Full Text Available Acid mine drainage (AMD is a worldwide problem leading to contamination of water sources. AMD are characterized by low pH and high content of heavy metals and sulphates. The barium salts application presents one of the methods for the sulphates removing from AMD. Barium chloride, barium hydroxide and barium sulphide are used for the sulphates precipitation in the form of barium sulphate. Because of high investment costs of barium salts, barium sulphide is recycled from barium sulphate precipitates. It can be recycled by thermic or bacterial reduction of barium sulphate. The aim of our study was to verify experimentally the possibility of the bacterial transformation of BaSO4 to BaS by sulphate-reducing bacteria. Applied BaSO4 came from experiments of sulphates removal from Smolnik AMD using BaCl2.

  11. Thermophilic sulfate reduction and methanogenesis with methanol in a high rate anaerobic reactor

    Energy Technology Data Exchange (ETDEWEB)

    Weijma, J.; Stams, A.J.M.; Pol, L.W.H.; Lettinga, G.

    2000-02-05

    Sulfate reduction outcompeted methanogenesis at 65 C and pH 7.5 in methanol and sulfate-fed expanded granular sludge bed reactors operated at hydraulic retention times (HRT) of 14 and 2.5 h, both under methanol-limiting and methanol-overloading conditions. After 100 and 50 days for the reactors operated at 14 and 3.5 h, respectively, sulfide production accounted for 80% of the methanol-COD consumed by the sludge. The specific methanogenic activity on methanol of the sludge from a reactor operated at HRTs of down to 3.5 h for a period of 4 months gradually decreased from 0.83 gCOD {sm_bullet} gVSS{sup {minus}1} {sm_bullet} day{sup {minus}1} at the start to a value of less than 0.05 gCOD {sm_bullet} gVSS{sup {minus}1} {sm_bullet} day{sup {minus}1}, showing that the relative number of methanogens decreased and eventually became very low. By contrast, the increase of the specific sulfidogenic activity of sludge from 0.22 gCOD {sm_bullet} gVSS{sup {minus}1} {sm_bullet} day{sup {minus}1} to a final value of 1.05 gCOD {sm_bullet} gVSS{sup {minus}1} {sm_bullet} day{sup {minus}1} showed that sulfate reducing bacteria were enriched. Methanol degradation by a methanogenic culture obtained from a reactor by serial dilution of the sludge was inhibited in the presence of vancomycin, indicating that methanogenesis directly from methanogenic culture obtained from a reactor by serial dilution of the sludge was inhibited in the presence of vancomycin, indicating that methanogenesis directly from methanol was not important. H{sub 2}/CO{sub 2} and formate, but not acetate, were degraded to methane in the presence of vancomycin. These results indicated that methanol degradation to methane occurs via the intermediates H{sub 2}/CO{sub 2} and formate. The high and low specific methanogenic activity of sludge on H{sub 2}/CO{sub 2} and formate, respectively, indicated that the former substrate probably acts as the main electron donor for the methanogens during methanol degradation. As

  12. Influence of sulfate reduction rates on the Phanerozoic sulfur isotope record

    Science.gov (United States)

    Leavitt, William D.; Halevy, Itay; Bradley, Alexander S.; Johnston, David T.

    2013-07-01

    Phanerozoic levels of atmospheric oxygen relate to the burial histories of organic carbon and pyrite sulfur. The sulfur cycle remains poorly constrained, however, leading to concomitant uncertainties in O2 budgets. Here we present experiments linking the magnitude of fractionations of the multiple sulfur isotopes to the rate of microbial sulfate reduction. The data demonstrate that such fractionations are controlled by the availability of electron donor (organic matter), rather than by the concentration of electron acceptor (sulfate), an environmental constraint that varies among sedimentary burial environments. By coupling these results with a sediment biogeochemical model of pyrite burial, we find a strong relationship between observed sulfur isotope fractionations over the last 200 Ma and the areal extent of shallow seafloor environments. We interpret this as a global dependency of the rate of microbial sulfate reduction on the availability of organic-rich sea-floor settings. However, fractionation during the early/mid-Paleozoic fails to correlate with shelf area. We suggest that this decoupling reflects a shallower paleoredox boundary, primarily confined to the water column in the early Phanerozoic. The transition between these two states begins during the Carboniferous and concludes approximately around the Triassic-Jurassic boundary, indicating a prolonged response to a Carboniferous rise in O2. Together, these results lay the foundation for decoupling changes in sulfate reduction rates from the global average record of pyrite burial, highlighting how the local nature of sedimentary processes affects global records. This distinction greatly refines our understanding of the S cycle and its relationship to the history of atmospheric oxygen.

  13. Inhibition of sulfate reduction by iron, cadmium and sulfide in granular sludge

    Energy Technology Data Exchange (ETDEWEB)

    Gonzalez-Silva, Blanca M. [Division de Ciencias Ambientales, Instituto Potosino de Investigacion Cientifica y Tecnologica, Camino a la Presa San Jose 2055, Lomas 4a. Seccion, 78216, San Luis Potosi, S.L.P. (Mexico); Briones-Gallardo, Roberto [Facultad de Ingenieria-Instituto de Metalurgia, Universidad Autonoma de San Luis Potosi, Sierra Leona 550, Lomas 2a. Seccion, 78210, San Luis Potosi, S.L.P. (Mexico); Razo-Flores, Elias [Division de Ciencias Ambientales, Instituto Potosino de Investigacion Cientifica y Tecnologica, Camino a la Presa San Jose 2055, Lomas 4a. Seccion, 78216, San Luis Potosi, S.L.P. (Mexico); Celis, Lourdes B., E-mail: celis@ipicyt.edu.mx [Division de Ciencias Ambientales, Instituto Potosino de Investigacion Cientifica y Tecnologica, Camino a la Presa San Jose 2055, Lomas 4a. Seccion, 78216, San Luis Potosi, S.L.P. (Mexico)

    2009-12-15

    This study investigated the inhibition effect of iron, cadmium and sulfide on the substrate utilization rate of sulfate reducing granular sludge. A series of batch experiments in a UASB reactor were conducted with different concentrations of iron (Fe{sup 2+}, 4.0-8.5 mM), cadmium (Cd{sup 2+}, 0.53-3.0 mM) and sulfide (4.2-10.6 mM), the reactor was fed with ethanol at 1 g chemical oxygen demand (COD)/L and sulfate to yield a COD/SO{sub 4}{sup 2-} (g/g) ratio of 0.5. The addition of iron, up to a concentration of 8.1 mM, had a positive effect on the substrate utilization rate which increased 40% compared to the rate obtained without metal addition (0.25 g COD/g VSS-d). Nonetheless, iron concentration of 8.5 mM inhibited the specific substrate utilization rate by 57% compared to the substrate utilization rate obtained in the batch amended with 4.0 mM Fe{sup 2+} (0.44 g COD/g VSS-d). Cadmium had a negative effect on the specific substrate utilization rate at the concentrations tested; at 3.0 mM Cd{sup 2+} the substrate utilization rate was inhibited by 44% compared with the substrate utilization rate without metal addition. Cadmium precipitation with sulfide did not decrease the inhibition of cadmium on sulfate reduction. These results could have important practical implications mainly when considering the application of the sulfate reducing process to treat effluents with high concentrations of sulfate and dissolved metals such as iron and cadmium.

  14. Sulfate reduction in sulfuric material after re-flooding: Effectiveness of organic carbon addition and pH increase depends on soil properties.

    Science.gov (United States)

    Yuan, Chaolei; Fitzpatrick, Rob; Mosley, Luke M; Marschner, Petra

    2015-11-15

    Sulfuric material is formed upon oxidation of sulfidic material; it is extremely acidic, and therefore, an environmental hazard. One option for increasing pH of sulfuric material may be stimulation of bacterial sulfate reduction. We investigated the effects of organic carbon addition and pH increase on sulfate reduction after re-flooding in ten sulfuric materials with four treatments: control, pH increase to 5.5 (+pH), organic carbon addition with 2% w/w finely ground wheat straw (+C), and organic carbon addition and pH increase (+C+pH). After 36 weeks, in five of the ten soils, only treatment +C+pH significantly increased the concentration of reduced inorganic sulfur (RIS) compared to the control and increased the soil pore water pH compared to treatment+pH. In four other soils, pH increase or/and organic carbon addition had no significant effect on RIS concentration compared to the control. The RIS concentration in treatment +C+pH as percentage of the control was negatively correlated with soil clay content and initial nitrate concentration. The results suggest that organic carbon addition and pH increase can stimulate sulfate reduction after re-flooding, but the effectiveness of this treatment depends on soil properties.

  15. Experimental investigation on thermochemical sulfate reduction by H2S initiation

    Science.gov (United States)

    Zhang, T.; Amrani, A.; Ellis, G.S.; Ma, Q.; Tang, Y.

    2008-01-01

    Hydrogen sulfide (H2S) is known to catalyze thermochemical sulfate reduction (TSR) by hydrocarbons (HC), but the reaction mechanism remains unclear. To understand the mechanism of this catalytic reaction, a series of isothermal gold-tube hydrous pyrolysis experiments were conducted at 330 ??C for 24 h under a constant confining pressure of 24.1 MPa. The reactants used were saturated HC (sulfur-free) and CaSO4 in the presence of variable H2S partial pressures at three different pH conditions. The experimental results showed that the in-situ pH of the aqueous solution (herein, in-situ pH refers to the calculated pH of aqueous solution under the experimental conditions) can significantly affect the rate of the TSR reaction. A substantial increase in the TSR reaction rate was recorded with a decrease in the in-situ pH value of the aqueous solution involved. A positive correlation between the rate of TSR and the initial partial pressure of H2S occurred under acidic conditions (at pH ???3-3.5). However, sulfate reduction at pH ???5.0 was undetectable even at high initial H2S concentrations. To investigate whether the reaction of H2S(aq) and HSO4- occurs at pH ???3, an additional series of isothermal hydrous pyrolysis experiments was conducted with CaSO4 and variable H2S partial pressures in the absence of HC at the same experimental temperature and pressure conditions. CaSO4 reduction was not measurable in the absence of paraffin even with high H2S pressure and acidic conditions. These experimental observations indicate that the formation of organosulfur intermediates from H2S reacting with hydrocarbons may play a significant role in sulfate reduction under our experimental conditions rather than the formation of elemental sulfur from H2S reacting with sulfate as has been suggested previously (Toland W. G. (1960) Oxidation of organic compounds with aqueous sulphate. J. Am. Chem. Soc. 82, 1911-1916). Quantification of labile organosulfur compounds (LSC), such as thiols

  16. High-throughput screening to identify selective inhibitors of microbial sulfate reduction (and beyond)

    Science.gov (United States)

    Carlson, H. K.; Coates, J. D.; Deutschbauer, A. M.

    2015-12-01

    The selective perturbation of complex microbial ecosystems to predictably influence outcomes in engineered and industrial environments remains a grand challenge for geomicrobiology. In some industrial ecosystems, such as oil reservoirs, sulfate reducing microorganisms (SRM) produce hydrogen sulfide which is toxic, explosive and corrosive. Current strategies to selectively inhibit sulfidogenesis are based on non-specific biocide treatments, bio-competitive exclusion by alternative electron acceptors or sulfate-analogs which are competitive inhibitors or futile/alternative substrates of the sulfate reduction pathway. Despite the economic cost of sulfidogenesis, there has been minimal exploration of the chemical space of possible inhibitory compounds, and very little work has quantitatively assessed the selectivity of putative souring treatments. We have developed a high-throughput screening strategy to target SRM, quantitatively ranked the selectivity and potency of hundreds of compounds and identified previously unrecognized SRM selective inhibitors and synergistic interactions between inhibitors. Once inhibitor selectivity is defined, high-throughput characterization of microbial community structure across compound gradients and identification of fitness determinants using isolate bar-coded transposon mutant libraries can give insights into the genetic mechanisms whereby compounds structure microbial communities. The high-throughput (HT) approach we present can be readily applied to target SRM in diverse environments and more broadly, could be used to identify and quantify the potency and selectivity of inhibitors of a variety of microbial metabolisms. Our findings and approach are relevant for engineering environmental ecosystems and also to understand the role of natural gradients in shaping microbial niche space.

  17. Sulfate reduction at low pH to remediate acid mine drainage

    Energy Technology Data Exchange (ETDEWEB)

    Sánchez-Andrea, Irene, E-mail: irene.sanchezandrea@wur.nl [Departamento de Biología Molecular, Universidad Autónoma de Madrid, 28049 Madrid (Spain); Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen (Netherlands); Sanz, Jose Luis [Departamento de Biología Molecular, Universidad Autónoma de Madrid, 28049 Madrid (Spain); Bijmans, Martijn F.M. [Wetsus, Centre of Sustainable Water Technology, P.O. Box 1113, 8900 CC Leeuwarden (Netherlands); Stams, Alfons J.M. [Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen (Netherlands); IBB – Institute for Biotechnology and Bioengineering, Centre of Biological Engineering, University of Minho, 4710-057 Braga (Portugal)

    2014-03-01

    Highlights: • Acid mine drainage (AMD) is an important environmental concern. • Remediation through biological sulfate reduction and metal recovery can be applied for AMD. • Microbial community composition has a major impact on the performance of bioreactors to treat AMD. • Acidophilic SRB are strongly influenced by proton, sulfide and organic acids concentration. - Abstract: Industrial activities and the natural oxidation of metallic sulfide-ores produce sulfate-rich waters with low pH and high heavy metals content, generally termed acid mine drainage (AMD). This is of great environmental concern as some heavy metals are highly toxic. Within a number of possibilities, biological treatment applying sulfate-reducing bacteria (SRB) is an attractive option to treat AMD and to recover metals. The process produces alkalinity, neutralizing the AMD simultaneously. The sulfide that is produced reacts with the metal in solution and precipitates them as metal sulfides. Here, important factors for biotechnological application of SRB such as the inocula, the pH of the process, the substrates and the reactor design are discussed. Microbial communities of sulfidogenic reactors treating AMD which comprise fermentative-, acetogenic- and SRB as well as methanogenic archaea are reviewed.

  18. Post-Translational Modifications of Desulfovibrio vulgaris Hildenborough Sulfate Reduction Pathway Proteins

    Energy Technology Data Exchange (ETDEWEB)

    Gaucher, S.P.; Redding, A.M.; Mukhopadhyay, A.; Keasling, J.D.; Singh, A.K.

    2008-03-01

    , Desulfovibrio desulfuricans G20, also showed similar +42 Da modifications in the same pathway. Here, we discuss our methods and implications of potential trimethylation in the D. vulgaris sulfate reduction pathway.

  19. Biodegradation of BTEX and Other Petroleum Hydrocarbons by Enhanced and Controlled Sulfate Reduction

    Energy Technology Data Exchange (ETDEWEB)

    Song Jin

    2007-07-01

    High concentrations of sulfide in the groundwater at a field site near South Lovedale, OK, were inhibiting sulfate reducing bacteria (SRB) that are known to degrade contaminants including benzene, toluene, ethylbenzene, and m+p-xylenes (BTEX). Microcosms were established in the laboratory using groundwater and sediment collected from the field site and amended with various nutrient, substrate, and inhibitor treatments. All microcosms were initially amended with FeCl{sub 2} to induce FeS precipitation and, thereby, reduce sulfide concentrations. Complete removal of BTEX was observed within 39 days in treatments with various combinations of nutrient and substrate amendments. Results indicate that elevated concentration of sulfide is a limiting factor to BTEX biodegradation at this site, and that treating the groundwater with FeCl{sub 2} is an effective remedy to facilitate and enhance BTEX degradation by the indigenous SRB population. On another site in Moore, OK, studies were conducted to investigate barium in the groundwater. BTEX biodegradation by SRB is suspected to mobilize barium from its precipitants in groundwater. Data from microcosms demonstrated instantaneous precipitation of barium when sulfate was added; however, barium was detected redissolving for a short period and precipitating eventually, when active sulfate reduction was occurring and BTEX was degraded through the process. SEM elemental spectra of the evolved show that sulfur was not present, which may exclude BaSO{sub 4} and BaS as a possible precipitates. The XRD analysis suggests that barium probably ended in BaS complexing with other amorphous species. Results from this study suggest that SRB may be able to use the sulfate from barite (BaSO{sub 4}) as an electron acceptor, resulting in the release of free barium ions (Ba{sup 2+}), and re-precipitate it in BaS, which exposes more toxicity to human and ecological health.

  20. Methanotrophy and sulfate reduction at the interface between Mediterranean seawater and the MgCl2-dominated Kryos brine basin

    Science.gov (United States)

    Steinle, Lea; Felber, Nicole; Casalino, Claudia; de Lange, Gert J.; Lehmann, Moritz F.; Stadnitskaia, Alina; Sinninghe Damste, Jaap S.; Tessarolo, Chiara; Treude, Tina; Zopfi, Jakob; Niemann, Helge

    2014-05-01

    The Kryos brine basin is located at ˜3000m water depth in the Eastern Mediterranean Sea. The anoxic brine originates from subsurface Messinian evaporites and is dominated by very high concentrations of MgCl2-equivalents (˜5M), making this environment challenging for live. The strong density difference between the brine and the overlying Mediterranean seawater impedes mixing, and the seawater-brine interface is thus characterized by a strong redox gradient. In the redoxcline, we observed sharp sulfate, sulfide and methane concentration gradients, from seawater background concentrations to high concentrations in the brine (˜150 mM sulfate, ˜250 μM sulfide, ˜50 μM methane). Right at the interface, under micro-oxic conditions, we determined methane oxidation rates of up to 60 nM/day, and sulfate reduction rates of up to 15 μM/day. Our findings of 13C-depleted biomarkers typical for aerobic methanotrophs (diplopterol, fatty acid C16:1ω8) indicate an aerobic mode of methane oxidation independent of sulfate reduction. Below the interface (within the anoxic brine), the presence of both methane and sulfate would make the anaerobic oxidation of methane with sulfate (AOM) thermodynamically feasible. However, while sulfate reduction rates were very high (500 μM/day), methane oxidation rates were not detectable suggesting inhibition of AOM. In the brine, we detected high concentrations of an unusual fatty acid (10Me-C16:0) indicative for sulfate reducing bacteria, which might be responsible for the high sulfate reduction rates. In addition, we also found archaeal lipids (archaeol, PMI) moderately depleted in 13C. Considering the absence of AOM activity, these lipids suggest a methanogenic, rather than methanotrophic origin of the archaea within the brine. All these results provide new and exciting insight into life in an extreme environment.

  1. Determination of kinetic coefficients for the simultaneous reduction of sulfate and uranium by Desulfovibrio desulfuricans bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Tucker, M.D.

    1995-05-01

    Uranium contamination of groundwaters and surface waters near abandoned mill tailings piles is a serious concern in many areas of the western United States. Uranium usually exists in either the U(IV) or the U(VI) oxidation state. U(VI) is soluble in water and, as a result, is very mobile in the environment. U(IV), however, is generally insoluble in water and, therefore, is not subject to aqueous transport. In recent years, researchers have discovered that certain anaerobic microorganisms, such as the sulfate-reducing bacteria Desulfovibrio desulfuricans, can mediate the reduction of U(VI) to U(IV). Although the ability of this microorganism to reduce U(VI) has been studied in some detail by previous researchers, the kinetics of the reactions have not been characterized. The purpose of this research was to perform kinetic studies on Desulfovibrio desulficans bacteria during simultaneous reduction of sulfate and uranium and to determine the phase in which uranium exists after it has been reduced and precipitated from solution. The studies were conducted in a laboratory-scale chemostat under substrate-limited growth conditions with pyruvate as the substrate. Kinetic coefficients for substrate utilization and cell growth were calculated using the Monod equation. The maximum rate of substrate utilization (k) was determined to be 4.70 days{sup {minus}1} while the half-velocity constant (K{sub s}) was 140 mg/l COD. The yield coefficient (Y) was determined to be 0.17 mg cells/mg COD while the endogenous decay coefficient (k{sub d}) was calculated as 0.072 days{sup {minus}1}. After reduction, U(IV) Precipitated from solution in the uraninite (UO{sub 2}) phase. Uranium removal efficiency as high as 90% was achieved in the chemostat.

  2. Evaluating enhanced sulfate reduction and optimized volatile fatty acids (VFA) composition in anaerobic reactor by Fe (III) addition.

    Science.gov (United States)

    Liu, Yiwen; Zhang, Yaobin; Ni, Bing-Jie

    2015-02-17

    Anaerobic reactors with ferric iron addition have been experimentally demonstrated to be able to simultaneously improve sulfate reduction and organic matter degradation during sulfate-containing wastewater treatment. In this work, a mathematical model is developed to evaluate the impact of ferric iron addition on sulfate reduction and organic carbon removal as well as the volatile fatty acids (VFA) composition in anaerobic reactor. The model is successfully calibrated and validated using independent long-term experimental data sets from the anaerobic reactor with Fe (III) addition under different operational conditions. The model satisfactorily describes the sulfate reduction, organic carbon removal and VFA production. Results show Fe (III) addition induces the microbial reduction of Fe (III) by iron reducing bacteria (IRB), which significantly enhances sulfate reduction by sulfate reducing bacteria (SRB) and subsequently changes the VFA composition to acetate-dominating effluent. Simultaneously, the produced Fe (II) from IRB can alleviate the inhibition of undissociated H2S on microorganisms through iron sulfide precipitation, resulting in further improvement of the performance. In addition, the enhancement on reactor performance by Fe (III) is found to be more significantly favored at relatively low organic carbon/SO4(2-) ratio (e.g., 1.0) than at high organic carbon/SO4(2-) ratio (e.g., 4.5). The Fe (III)-based process of this work can be easily integrated with a commonly used strategy for phosphorus recovery, with the produced sulfide being recovered and then deposited into conventional chemical phosphorus removal sludge (FePO4) to achieve FeS precipitation for phosphorus recovery while the required Fe (III) being acquired from the waste ferric sludge of drinking water treatment process, to enable maximum resource recovery/reuse while achieving high-rate sulfate removal.

  3. Galvanic interpretation of self-potential signals associated withmicrobial sulfate-reduction

    Energy Technology Data Exchange (ETDEWEB)

    Williams, Kenneth H.; Hubbard, Susan S.; Banfield, Jillian F.

    2007-05-02

    We have evaluated the usefulness of the self-potential (SP)geophysical method to track the onset and location of microbialsulfate-reduction in saturated sediments during organic carbon amendment.Following stimulation of sulfate-reducing bacteria (SRB) by addition oflactate, anomalous voltages exceeding 600 mV correlated in space and timewith the accumulation of dissolved sulfide. Abiotic experiments in whichthe sulfide concentration at the measurement electrode was systematicallyvaried showed a positive correlation between the magnitude of the SPanomaly and differences in the half-cell potential associated with themeasurement and reference electrodes. Thus, we infer that the SPanomaliesresulted from electrochemical differences that developedbetween sulfide-rich regions and areas having higher oxidation potential.In neither experiment did generation of an SP anomaly require thepresence of an in situ electronic conductor, as is required by othermodels. These findings emphasize the importance of incorporation ofelectrochemical effects at electrode surfaces in interpretation of SPdata from geophysical studies. We conclude that SP measurements provide aminimally invasive means for monitoring stimulated sulfate-reductionwithin saturated sediments.

  4. Microbial links between sulfate reduction and metal retention in uranium- and heavy metal-contaminated soil

    DEFF Research Database (Denmark)

    Sitte, Jana; Akob, Denise M.; Kaufmann, Christian;

    2010-01-01

    Sulfate-reducing bacteria (SRB) can affect metal mobility either directly by reductive transformation of metal ions, e.g., uranium, into their insoluble forms or indirectly by formation of metal sulfides. This study evaluated in situ and biostimulated activity of SRB in groundwater-influenced soils...... from a creek bank contaminated with heavy metals and radionuclides within the former uranium mining district of Ronneburg, Germany. In situ activity of SRB, measured by the 35SO42– radiotracer method, was restricted to reduced soil horizons with rates of 142 ± 20 nmol cm–3 day–1. Concentrations...... of heavy metals were enriched in the solid phase of the reduced horizons, whereas pore water concentrations were low. X-ray absorption near-edge structure (XANES) measurements demonstrated that 80% of uranium was present as reduced uranium but appeared to occur as a sorbed complex. Soil-based dsrAB clone...

  5. High rates of sulfate reduction in a low-sulfate hot spring microbial mat are driven by a low level of diversity of sulfate-respiring microorganisms

    DEFF Research Database (Denmark)

    Dillon, Jesse G; Fishbain, Susan; Miller, Scott R

    2007-01-01

    was shown to sustain a highly active sulfur cycle. The highest rates of sulfate respiration were measured close to the surface of the mat late in the day when photosynthetic oxygen production ceased and were associated with a Thermodesulfovibrio-like population. Reduced activity at greater depths...

  6. Models of oxic respiration, denitrification and sulfate reduction in zones of coastal upwelling

    Science.gov (United States)

    Canfield, D. E.

    2006-12-01

    Coastal upwelling zones support some of the highest rates of primary production in the oceans. The settling and subsequent decomposition of this organic matter promotes oxygen depletion. In the Eastern tropical North and South Pacific and the Arabian Sea, large tracts of anoxic water develop, where intensive N 2 production through denitrification and anammox accounts for about 1/3 of the total loss of fixed nitrogen in the marine realm. It is curious that despite extensive denitrification in these waters, complete nitrate removal and the onset of sulfate reduction is extremely rare. A simple box model is constructed here to reproduce the dynamics of carbon, oxygen and nutrient cycling in coastal upwelling zones. The model is constructed with five boxes, where water is exchanged between the boxes by vertical and horizontal mixing and advection. These primary physical drivers control the dynamics of the system. The model demonstrates that in the absence of nitrogen fixation, the anoxic waters in a coastal upwelling system will not become nitrate free. This is because nitrate is the limiting nutrient controlling primary production, and if nitrate concentration becomes too low, primary production rate drops and this reduces rates of nitrate removal through N 2 production. With nitrogen fixation, however, complete nitrate depletion can occur and sulfate reduction will ensue. This situation is extremely rare in coastal upwelling zones, probably because nitrogen-fixing bacteria do not prosper in the high nutrient, turbid waters as typically in these areas. Finally, it is predicted here that the chemistry of the upwelling system will develop in a similar matter regardless whether N 2 production is dominated by anaerobic ammonium oxidation (anammox) or canonical heterotrophic denitrification.

  7. Effect of sulfide removal on sulfate reduction at pH 5 in a hydrogen fed gas-lift bioreactor.

    Science.gov (United States)

    Bijmans, Martijn F M; Dopson, Mark; Ennin, Frederick; Lens, Piet N L; Buisman, Cees J N

    2008-11-01

    Biotechnological treatment of sulfate- and metal-ionscontaining acidic wastewaters from mining and metallurgical activities utilizes sulfate-reducing bacteria to produce sulfide that can subsequently precipitate metal ions. Reducing sulfate at a low pH has several advantages above neutrophilic sulfate reduction. This study describes the effect of sulfide removal on the reactor performance and microbial community in a high-rate sulfidogenic gas-lift bioreactor fed with hydrogen at a controlled internal pH of 5. Under sulfide removal conditions, 99% of the sulfate was converted at a hydraulic retention time of 24 h, reaching a volumetric activity as high as 51 mmol sulfate/l/d. Under nonsulfide removal conditions, sulfide removal at a hydraulic retention time of 24 h resulted in an average H2S concentration of 18.2 mM (584 mg S/l). The incomplete sulfate removal was probably due to sulfide inhibition. Molecular phylogenetic analysis identified 11 separate 16S rRNA bands under sulfide stripping conditions, whereas under nonsulfide removal conditions only 4 separate 16S rRNA bands were found. This shows that a less diverse population was found in the presence of a high sulfide concentration.

  8. Removal of antimony (Sb(V)) from Sb mine drainage: biological sulfate reduction and sulfide oxidation-precipitation.

    Science.gov (United States)

    Wang, Huawei; Chen, Fulong; Mu, Shuyong; Zhang, Daoyong; Pan, Xiangliang; Lee, Duu-Jong; Chang, Jo-Shu

    2013-10-01

    Antimony (Sb(V)) in Sb mine drainage has adverse effects on the receiving water environments. This study for the first time demonstrated the feasibility of using sulfate-reducing bacteria (SRB) to convert sulfate ions in SMD into sulfides that reduce Sb(V) to Sb(III) and to form complex with Sb(III) as precipitate. The principal compound in the precipitate was stibnite (Sb2S3) at pH 7 and pH 9. The Sb(V) removal mechanism is sulfate-reduction and sulfide oxidization-precipitation, different from the conventional SRB-precipitation processes for heavy metals. The Sb(V)/sulfate ratio is noted an essential parameter affecting the Sb removal efficiency from SMD.

  9. Bacterially Induced Dolomite Formation in the Presence of Sulfate Ions under Aerobic Conditions

    Science.gov (United States)

    Sanchez-Roman, M.; McKenzie, J. A.; Vasconcelos, C.; Rivadeneyra, M.

    2005-12-01

    The origin of dolomite remains a long-standing enigma in sedimentary geology because, although thermodynamically favorable, precipitation of dolomite from modern seawater does not occur. Experiments conducted at elevated temperatures (200 oC) indicated that the presence of small concentrations of sulfate ions inhibits the transformation of calcite to dolomite [1]. Indeed, sulfate ions appeared to inhibit dolomite formation above 2 mM concentration (versus 28 mM in modern seawater). Recently, culture experiments have demonstrated that sulfate-reducing bacteria mediate the precipitation of dolomite at Earth surface conditions in the presence of sustained sulfate ion concentrations [2,3]. Additionally, in a number of modern hypersaline environments, dolomite forms from solutions with high sulfate ion concentrations (2 to 70 times seawater). These observations suggest that the experimentally observed sulfate-ion inhibition [1] may not apply to all ancient dolomite formation. Here, we report aerobic culture experiments conducted at low temperatures (25 and 35 oC) and variable sulfate ion concentrations (0, 0.5, 1 and 2 x seawater values) using moderately halophilic bacteria, Halomonas meridiana. After an incubation period of 15 days, experiments at 35 oC with variable sulfate ion concentrations (0, 0.5 x and seawater values) contained crystals of Ca-dolomite and stochiometric dolomite. The experiment at 35 oC with 2 x seawater sulfate ion concentration produced dolomite crystals after 20 days of incubation. In a parallel set of experiments at 25 oC, precipitation of dolomite was observed after 25 days of incubation in cultures with variable sulfate ion concentrations (0, 0.5 x and seawater values). In the culture with 2 x seawater sulfate ion concentration, dolomite crystals were observed after 30 days. Our study demonstrates that halophilic bacteria (or heterotrophic microorganisms), which do not require sulfate ions for metabolism, can mediate dolomite precipitation

  10. Bacterial reduction of selenium in coal mine tailings pond sediment

    Energy Technology Data Exchange (ETDEWEB)

    Siddique, T.; Arocena, J.M.; Thring, R.W.; Zhang, Y.Q. [University of North British Columbia, Prince George, BC (Canada)

    2007-05-15

    Sediment from a storage facility for coal tailings solids was assessed for its capacity to reduce selenium (Se) by native bacterial community. One Se{sup 6+}-reducing bacterium Enterobacter hormaechei (Tar11) and four Se{sup 4+}-reducing bacteria, Klebsiella pneumoniae (Tar1), Pseudomonasfluorescens (Tar3), Stenotrophomonas maltophilia (Tar6), and Enterobacter amnigenus (Tar8) were isolated from the sediment. Enterobacter horinaechei removed 96% of the added Se{sup 6+} (0.92 mg L{sup -1} from the effluents when Se6+ was determined after 5 d of incubation. Analysis of the red precipitates showed that Se{sup 6+} reduction resulted in the formation of spherical particles ({lt}1.0 {mu} m) of Se 0 as observed under scanning electron microscope (SEM) and confirmed by EDAX. Selenium speciation was performed to examine the fate of the added Se{sup 6+} in the sediment with or without addition of Enterobacter hormaechei cells. More than 99% of the added Se{sup 6+} (about 2.5 mg L{sup -1}) was transformed in the nonsterilized sediment (without Enterobacter hormaechei cells) as well as in the sterilized (heat-killed) sediment (with Enterobacter hormaechei cells). The results of this study suggest that the lagoon sediments at the mine site harbor Se{sup 6+}- and Se{sup 4+} -reducing bacteria and may be important sinks for soluble Se (Se{sup 6+} and Se{sup 4+}). Enterobacter hormaechei isolated from metal-contaminated sediment may have potential application in removing Se from industrial effluents.

  11. Microbial Sulfate Reduction Potential in Coal-Bearing Sediments Down to ~2.5 km below the Seafloor off Shimokita Peninsula, Japan

    Science.gov (United States)

    Glombitza, Clemens; Adhikari, Rishi R.; Riedinger, Natascha; Gilhooly, William P.; Hinrichs, Kai-Uwe; Inagaki, Fumio

    2016-01-01

    Sulfate reduction is the predominant anaerobic microbial process of organic matter mineralization in marine sediments, with recent studies revealing that sulfate reduction not only occurs in sulfate-rich sediments, but even extends to deeper, methanogenic sediments at very low background concentrations of sulfate. Using samples retrieved off the Shimokita Peninsula, Japan, during the Integrated Ocean Drilling Program (IODP) Expedition 337, we measured potential sulfate reduction rates by slurry incubations with 35S-labeled sulfate in deep methanogenic sediments between 1276.75 and 2456.75 meters below the seafloor. Potential sulfate reduction rates were generally extremely low (mostly below 0.1 pmol cm−3 d−1) but showed elevated values (up to 1.8 pmol cm−3 d−1) in a coal-bearing interval (Unit III). A measured increase in hydrogenase activity in the coal-bearing horizons coincided with this local increase in potential sulfate reduction rates. This paired enzymatic response suggests that hydrogen is a potentially important electron donor for sulfate reduction in the deep coalbed biosphere. By contrast, no stimulation of sulfate reduction rates was observed in treatments where methane was added as an electron donor. In the deep coalbeds, small amounts of sulfate might be provided by a cryptic sulfur cycle. The isotopically very heavy pyrites (δ34S = +43‰) found in this horizon is consistent with its formation via microbial sulfate reduction that has been continuously utilizing a small, increasingly 34S-enriched sulfate reservoir over geologic time scales. Although our results do not represent in-situ activity, and the sulfate reducers might only have persisted in a dormant, spore-like state, our findings show that organisms capable of sulfate reduction have survived in deep methanogenic sediments over more than 20 Ma. This highlights the ability of sulfate-reducers to persist over geological timespans even in sulfate-depleted environments. Our study

  12. Distinguishing solid bitumens formed by thermochemical sulfate reduction and thermal chemical alteration

    Science.gov (United States)

    Kelemen, S.R.; Walters, C.C.; Kwiatek, P.J.; Afeworki, M.; Sansone, M.; Freund, H.; Pottorf, R.J.; Machel, H.G.; Zhang, T.; Ellis, G.S.; Tang, Y.; Peters, K.E.

    2008-01-01

    Insoluble solid bitumens are organic residues that can form by the thermal chemical alteration (TCA) or thermochemical sulfate reduction (TSR) of migrated petroleum. TCA may actually encompass several low temperature processes, such as biodegradation and asphaltene precipitation, followed by thermal alteration. TSR is an abiotic redox reaction where petroleum is oxidized by sulfate. It is difficult to distinguish solid bitumens associated with TCA of petroleum from those associated with TSR when both processes occur at relatively high temperature. The focus of the present work was to characterize solid bitumen samples associated with TCA or TSR using X-ray photoelectron spectroscopy (XPS). XPS is a surface analysis conducted on either isolated or in situ (>25 ??m diameter) solid bitumen that can provide the relative abundance and chemical speciation of carbon, organic and inorganic heteroatoms (NSO). In this study, naturally occurring solid bitumens from three locations, Nisku Fm. Brazeau River area (TSR-related), LaBarge Field Madison Fm. (TSR-related), and the Alaskan Brooks range (TCA-related), are compared to organic solids generated during laboratory simulation of the TSR and TCA processes. The abundance and chemical nature of organic nitrogen and sulfur in solid bitumens can be understood in terms of the nature of (1) petroleum precursor molecules, (2) the concentration of nitrogen by way of thermal stress and (3) the mode of sulfur incorporation. TCA solid bitumens originate from polar materials that are initially rich in sulfur and nitrogen. Aromaticity and nitrogen increase as thermal stress cleaves aliphatic moieties and condensation reactions take place. Organic sulfur in TCA organic solids remains fairly constant with increasing maturation (3.5 to ???17 sulfur per 100 carbons) into aromatic structures and to the low levels of nitrogen in their hydrocarbon precursors. Hence, XPS results provide organic chemical composition information that helps to

  13. Long-term dynamics of uranium reduction/reoxidation under low sulfate conditions

    Science.gov (United States)

    Komlos, John; Peacock, Aaron; Kukkadapu, Ravi K.; Jaffé, Peter R.

    2008-08-01

    The biological reduction and precipitation of uranium in groundwater has the potential to prevent uranium migration from contaminated sites. Although previous research has shown that uranium bioremediation is maximized during iron reduction, little is known on how long-term iron/uranium reducing conditions can be maintained. Questions also remain about the stability of uranium and other reduced species after a long-term biostimulation scheme is discontinued and oxidants (i.e., oxygen) re-enter the bioreduced zone. To gain further insights into these processes, four columns, packed with sediment containing iron as Fe-oxides (mainly Al-goethite) and silicate Fe (Fe-containing clays), were operated in the laboratory under field-relevant flow conditions to measure the long-term (>200 day) removal efficiency of uranium from a simulated groundwater during biostimulation with an electron donor (3 mM acetate) under low sulfate conditions. The biostimulation experiments were then followed by reoxidation of the reduced sediments with oxygen. During biostimulation, Fe(III) reduction occurred simultaneously with U(VI) reduction. Both Fe-oxides and silicate Fe(III) were partly reduced, and silicate Fe(III) reduction was detected only during the first half of the biostimulation phase while Fe-oxide reduction occurred throughout the whole biostimulation period. Mössbauer measurements indicated that the biogenic Fe(II) precipitate resulting from Fe-oxide reduction was neither siderite nor FeS 0.09 (mackinawite). U(VI) reduction efficiency increased throughout the bioreduction period, while the Fe(III) reduction gradually decreased with time. Effluent Fe(II) concentrations decreased linearly by only 30% over the final 100 days of biostimulation, indicating that bioreducible Fe(III) in the sediment was not exhausted at the termination of the experiment. Even though Fe(III) reduction did not change substantially with time, microorganisms not typically associated with Fe(III) and U

  14. The pH and pCO2 dependence of sulfate reduction in shallow-sea hydrothermal CO2 – venting sediments (Milos Island, Greece

    Directory of Open Access Journals (Sweden)

    Elisa eBayraktarov

    2013-05-01

    Full Text Available Microbial sulfate reduction is a dominant process of organic matter mineralization in sulfate-rich anoxic environments at neutral pH. Recent studies have demonstrated sulfate reduction in low pH environments, but investigations on the microbial activity at variable pH and CO2 partial pressure are still lacking. In this study, the effect of pH and pCO2 on microbial activity was investigated by incubation experiments with radioactive 35S targeting sulfate reduction in sediments from the shallow-sea hydrothermal vent system of Milos, Greece, where pH is naturally decreased by CO2 release. Sediments differed in their physicochemical characteristics with distance from the main site of fluid discharge. Adjacent to the vent site (T ~ 40 – 75 °C, pH ~ 5, maximal sulfate reduction rates were observed between pH 5 – 6. Sulfate reduction in hydrothermally influenced sediments decreased at neutral pH. Sediments unaffected by hydrothermal venting (T ~ 26°, pH ~ 8 expressed the highest sulfate reduction rates between pH 6 – 7. Further experiments investigating the effect of pCO2 on sulfate reduction revealed a steep decrease in activity when the partial pressure increased from 2 to 3 bar. Findings suggest that sulfate reducing microbial communities associated with hydrothermal vent system are adapted to low pH and high CO2, while communities at control sites required a higher pH for optimal activity.

  15. Effect of Sulfide Removal on Sulfate Reduction at pH 5 in a Hydrogen fed Gas-Lift Bioreactor

    NARCIS (Netherlands)

    Bijmans, M.F.M.; Dopson, M.; Lens, P.N.L.; Buisman, C.J.N.

    2008-01-01

    UNCORRECTED PROOF J. Microbiol. Biotechnol. (2007), 17(4), ¿ Effect of Sulfide Removal on Sulfate Reduction at pH 5 in a Hydrogen fed Gas-Lift Bioreactor Bijmans, Martijn F. M.1*, Mark Dopson2, Frederick Ennin1, Piet N. L. Lens1, and Cees J. N. Buisman1 1Sub Department of Environmental Technology, W

  16. Effect of environmental conditions on sulfate reduction with methane as electron donor by an Eckemförde Bay enrichment

    NARCIS (Netherlands)

    Meulepas, R.J.W.; Jagersma, C.G.; Khadem, A.F.; Buisman, C.J.N.; Stams, A.J.M.; Lens, P.N.L.

    2009-01-01

    Sulfate reduction (SR) coupled to anaerobic oxidation of methane (AOM) is meditated by marine microorganisms and forms an important process in the global sulfur and carbon cycle. In this research, the possibility to use this process for the removal and recovery of sulfur and metal compounds from was

  17. Redox transformation, solid phase speciation and solution dynamics of copper during soil reduction and reoxidation as affected by sulfate availability

    Science.gov (United States)

    Fulda, Beate; Voegelin, Andreas; Ehlert, Katrin; Kretzschmar, Ruben

    2013-12-01

    In periodically flooded soils, interactions of Cu with biogenic sulfide formed during soil reduction lead to the precipitation of sparingly soluble Cu-sulfides. In contaminated soils, however, the amounts of Cu can exceed the amount of sulfate available for microbial reduction to sulfide. In laboratory batch experiments, we incubated a paddy soil spiked to ∼4.4 mmol kg-1 (280 mg kg-1) Cu(II) to monitor temporal changes in the concentrations of dissolved Cu and the speciation of solid-phase Cu during 40 days of soil reduction and 28 days of reoxidation as a function of initially available reducible sulfate (0.06, 2.09 or 5.92 mmol kg-1). Using Cu K-edge EXAFS spectroscopy, we found that a large fraction of Cu(II) became rapidly reduced to Cu(I) (23-39%) and Cu(0) (7-17%) before the onset of sulfate reduction. Combination with results from sequential Cu extraction and chromium reducible sulfur (CRS) data suggested that complexation of Cu(I) by reduced organic S groups (Sorg) may be an important process during this early stage. In sulfate-depleted soil, Cu(0) and Cu(I)-Sorg remained the dominant species over the entire reduction period, whereas in soils with sufficient sulfate, initially formed Cu(0) and (remaining) Cu(II) became transformed into Cu-sulfide during continuing sulfate reduction. The formation of Cu(0), Cu(I)-Sorg, and Cu-sulfide led to an effective decrease in dissolved Cu concentrations. Differences in Cu speciation at the end of soil reduction however affected the dynamics of Cu during reoxidation. Whereas Cu(0) was rapidly oxidized to Cu(II), more than half of the S-coordinated Cu fraction persisted over 14 days of aeration. Our results show that precipitation of Cu(0) and complexation of Cu(I) by reduced organic S groups are important processes in periodically flooded soils if sulfide formation is limited by the amount of available sulfate or the duration of soil flooding. The speciation changes of Cu described in this study may also affect the

  18. Microbial reduction of structural iron in interstratified illite-smectite minerals by a sulfate-reducing bacterium

    Science.gov (United States)

    Liu, D.; Dong, H.; Bishop, M.E.; Zhang, Jiahua; Wang, Hongfang; Xie, S.; Wang, Shaoming; Huang, L.; Eberl, D.D.

    2012-01-01

    Clay minerals are ubiquitous in soils, sediments, and sedimentary rocks and could coexist with sulfate-reducing bacteria (SRB) in anoxic environments, however, the interactions of clay minerals and SRB are not well understood. The objective of this study was to understand the reduction rate and capacity of structural Fe(III) in dioctahedral clay minerals by a mesophilic SRB, Desulfovibrio vulgaris and the potential role in catalyzing smectite illitization. Bioreduction experiments were performed in batch systems, where four different clay minerals (nontronite NAu-2, mixed-layer illite-smectite RAr-1 and ISCz-1, and illite IMt-1) were exposed to D. vulgaris in a non-growth medium with and without anthraquinone-2,6-disulfonate (AQDS) and sulfate. Our results demonstrated that D. vulgaris was able to reduce structural Fe(III) in these clay minerals, and AQDS enhanced the reduction rate and extent. In the presence of AQDS, sulfate had little effect on Fe(III) bioreduction. In the absence of AQDS, sulfate increased the reduction rate and capacity, suggesting that sulfide produced during sulfate reduction reacted with the phyllosilicate Fe(III). The extent of bioreduction of structural Fe(III) in the clay minerals was positively correlated with the percentage of smectite and mineral surface area of these minerals. X-ray diffraction, and scanning and transmission electron microscopy results confirmed formation of illite after bioreduction. These data collectively showed that D. vulgaris could promote smectite illitization through reduction of structural Fe(III) in clay minerals. ?? 2011 Blackwell Publishing Ltd.

  19. Microbial reduction of structural iron in interstratified illite-smectite minerals by a sulfate-reducing bacterium.

    Science.gov (United States)

    Liu, D; Dong, H; Bishop, M E; Zhang, J; Wang, H; Xie, S; Wang, S; Huang, L; Eberl, D D

    2012-03-01

    Clay minerals are ubiquitous in soils, sediments, and sedimentary rocks and could coexist with sulfate-reducing bacteria (SRB) in anoxic environments, however, the interactions of clay minerals and SRB are not well understood. The objective of this study was to understand the reduction rate and capacity of structural Fe(III) in dioctahedral clay minerals by a mesophilic SRB, Desulfovibrio vulgaris and the potential role in catalyzing smectite illitization. Bioreduction experiments were performed in batch systems, where four different clay minerals (nontronite NAu-2, mixed-layer illite-smectite RAr-1 and ISCz-1, and illite IMt-1) were exposed to D. vulgaris in a non-growth medium with and without anthraquinone-2,6-disulfonate (AQDS) and sulfate. Our results demonstrated that D. vulgaris was able to reduce structural Fe(III) in these clay minerals, and AQDS enhanced the reduction rate and extent. In the presence of AQDS, sulfate had little effect on Fe(III) bioreduction. In the absence of AQDS, sulfate increased the reduction rate and capacity, suggesting that sulfide produced during sulfate reduction reacted with the phyllosilicate Fe(III). The extent of bioreduction of structural Fe(III) in the clay minerals was positively correlated with the percentage of smectite and mineral surface area of these minerals. X-ray diffraction, and scanning and transmission electron microscopy results confirmed formation of illite after bioreduction. These data collectively showed that D. vulgaris could promote smectite illitization through reduction of structural Fe(III) in clay minerals.

  20. Reductive genome evolution at both ends of the bacterial population size spectrum.

    Science.gov (United States)

    Batut, Bérénice; Knibbe, Carole; Marais, Gabriel; Daubin, Vincent

    2014-12-01

    Bacterial genomes show substantial variations in size. The smallest bacterial genomes are those of endocellular symbionts of eukaryotic hosts, which have undergone massive genome reduction and show patterns that are consistent with the degenerative processes that are predicted to occur in species with small effective population sizes. However, similar genome reduction is found in some free-living marine cyanobacteria that are characterized by extremely large populations. In this Opinion article, we discuss the different hypotheses that have been proposed to account for this reductive genome evolution at both ends of the bacterial population size spectrum.

  1. Thermophilic nitrate-reducing microorganisms prevent sulfate reduction in cold marine sediments incubated at high temperature

    Science.gov (United States)

    Nepomnyashchaya, Yana; Rezende, Julia; Hubert, Casey

    2014-05-01

    Hydrogen sulphide produced during metabolism of sulphate-reducing microorganisms (SRM) is toxic, corrosive and causes detrimental oil reservoir souring. During secondary oil recovery, injecting oil reservoirs with seawater that is rich in sulphate and that also cools high temperature formations provides favourable growth conditions for SRM. Nitrate addition can prevent metabolism of SRM by stimulating nitrate-reducing microorganisms (NRM). The investigations of thermophilic NRM are needed to develop mechanisms to control the metabolism of SRM in high temperature oil field ecosystems. We therefore established a model system consisting of enrichment cultures of cold surface marine sediments from the Baltic Sea (Aarhus Bay) that were incubated at 60°C. Enrichments contained 25 mM nitrate and 40 mM sulphate as potential electron acceptors, and a mixture of the organic substrates acetate, lactate, propionate, butyrate (5 mM each) and yeast extract (0.01%) as potential carbon sources and electron donors. Slurries were incubated at 60°C both with and without initial pasteurization at 80°C for 2 hours. In the enrichments containing both nitrate and sulphate, the concentration of nitrate decreased indicating metabolic activity of NRM. After a four-hour lag phase the rate of nitrate reduction increased and the concentration of nitrate dropped to zero after 10 hours of incubation. The concentration of nitrite increased as the reduction of nitrate progressed and reached 16.3 mM after 12 hours, before being consumed and falling to 4.4 mM after 19-day of incubation. No evidence for sulphate reduction was observed in these cultures during the 19-day incubation period. In contrast, the concentration of sulphate decreased up to 50% after one week incubation in controls containing only sulphate but no nitrate. Similar sulfate reduction rates were seen in the pasteurized controls suggesting the presence of heat resistant SRM, whereas nitrate reduction rates were lower in the

  2. Assessing sulfate reduction and methane cycling in a high salinity pore water system in the northern Gulf of Mexico

    Science.gov (United States)

    Pohlman, J.W.; Ruppel, C.; Hutchinson, D.R.; Downer, R.; Coffin, R.B.

    2008-01-01

    Pore waters extracted from 18 piston cores obtained on and near a salt-cored bathymetric high in Keathley Canyon lease block 151 in the northern Gulf of Mexico contain elevated concentrations of chloride (up to 838 mM) and have pore water chemical concentration profiles that exhibit extensive departures (concavity) from steady-state (linear) diffusive equilibrium with depth. Minimum ??13C dissolved inorganic carbon (DIC) values of -55.9??? to -64.8??? at the sulfate-methane transition (SMT) strongly suggest active anaerobic oxidation of methane (AOM) throughout the study region. However, the nonlinear pore water chemistry-depth profiles make it impossible to determine the vertical extent of active AOM or the potential role of alternate sulfate reduction pathways. Here we utilize the conservative (non-reactive) nature of dissolved chloride to differentiate the effects of biogeochemical activity (e.g., AOM and/or organoclastic sulfate reduction) relative to physical mixing in high salinity Keathley Canyon sediments. In most cases, the DIC and sulfate concentrations in pore waters are consistent with a conservative mixing model that uses chloride concentrations at the seafloor and the SMT as endmembers. Conservative mixing of pore water constituents implies that an undetermined physical process is primarily responsible for the nonlinearity of the pore water-depth profiles. In limited cases where the sulfate and DIC concentrations deviated from conservative mixing between the seafloor and SMT, the ??13C-DIC mixing diagrams suggest that the excess DIC is produced from a 13C-depleted source that could only be accounted for by microbial methane, the dominant form of methane identified during this study. We conclude that AOM is the most prevalent sink for sulfate and that it occurs primarily at the SMT at this Keathley Canyon site.

  3. Sulfate reduction and sulfide oxidation in extremely steep salinity gradients formed by freshwater springs emerging into the Dead Sea.

    Science.gov (United States)

    Häusler, Stefan; Weber, Miriam; Siebert, Christian; Holtappels, Moritz; Noriega-Ortega, Beatriz E; De Beer, Dirk; Ionescu, Danny

    2014-12-01

    Abundant microbial mats, recently discovered in underwater freshwater springs in the hypersaline Dead Sea, are mostly dominated by sulfur-oxidizing bacteria. We investigated the source of sulfide and the activity of these communities. Isotopic analysis of sulfide and sulfate in the spring water showed a fractionation of 39-50‰ indicative of active sulfate reduction. Sulfate reduction rates (SRR) in the spring sediment (Dead Sea water are responsible for the abundant microbial biomass around the springs. The springs flow is highly variable and accordingly the local salinities. We speculate that the development of microbial mats dominated by either Sulfurimonas/Sulfurovum-like or Thiobacillus/Acidithiobacillus-like sulfide-oxidizing bacteria, results from different mean salinities in the microenvironment of the mats. SRR of up to 10 nmol cm(-3) day(-1) detected in the Dead Sea sediment are surprisingly higher than in the less saline springs. While this shows the presence of an extremely halophilic sulfate-reducing bacteria community in the Dead Sea sediments, it also suggests that extensive salinity fluctuations limit these communities in the springs due to increased energetic demands for osmoregulation.

  4. MODELLING OF BACTERIAL SULPHATE REDUCTION IN ANAEROBIC PONDS : KINETIC INVESTIGATIONS

    OpenAIRE

    Harerimana, Casimir; Vasel, Jean-Luc; Jupsin, Hugues; Ouali, Amira

    2011-01-01

    The aim of the study was first to develop a simple and practical model of anaerobic digestion including sulphate-reduction in anaerobic ponds. The basic microbiology of our model consists of three steps, namely, acidogenesis, methanogenesis, and sulphate reduction. This model includes multiple reaction stoichiometry and substrate utilization kinetics. The second aim was to determine some kinetic parameters associated with this model. The values of these parameters for sulfidogenic bacteria ar...

  5. Fe(III)EDTA and Fe(II)EDTA-NO reduction by a sulfate reducing bacterium in NO and SO₂ scrubbing liquor.

    Science.gov (United States)

    Chen, Mingxiang; Zhou, Jiti; Zhang, Yu; Wang, Xiaojun; Shi, Zhuang; Wang, Xiaowei

    2015-03-01

    A viable process concept, based on NO and SO2 absorption into an alkaline Fe(II)EDTA (EDTA: ethylenediaminetetraacetic acid) solution in a scrubber combined with biological reduction of the absorbed SO2 utilizing sulfate reducing bacteria (SRB) and regeneration of the scrubbing liquor in a single bioreactor, was developed. The SRB, Desulfovibrio sp. CMX, was used and its sulfate reduction performances in FeEDTA solutions and Fe(II)EDTA-NO had been investigated. In this study, the detailed regeneration process of Fe(II)EDTA solution, which contained Fe(III)EDTA and Fe(II)EDTA-NO reduction processes in presence of D. sp. CMX and sulfate, was evaluated. Fe(III)EDTA and Fe(II)EDTA-NO reduction processes were primarily biological, even if Fe(III)EDTA and Fe(II)EDTA-NO could also be chemically convert to Fe(II)EDTA by biogenic sulfide. Regardless presence or absence of sulfate, more than 87 % Fe(III)EDTA and 98 % Fe(II)EDTA-NO were reduced in 46 h, respectively. Sulfate and Fe(III)EDTA had no affection on Fe(II)EDTA-NO reduction. Sulfate enhanced final Fe(III)EDTA reduction. Effect of Fe(III)EDTA on Fe(II)EDTA-NO reduction rate was more obvious than effect of sulfate on Fe(II)EDTA-NO reduction rate before 8 h. To overcome toxicity of Fe(II)EDTA-NO on SRB, Fe(II)EDTA-NO was reduced first and the reduction of Fe(III)EDTA and sulfate occurred after 2 h. First-order Fe(II)EDTA-NO reduction rate and zero-order Fe(III)EDTA reduction rate were detected respectively before 8 h.

  6. Bacterial reduction of mercury in the high arctic

    DEFF Research Database (Denmark)

    Møller, Annette Klæstrup

    than the rare phyla, suggesting that the ecological success of a bacterial phylum depends on the diversity rather than the dominance of a few genera. The most dominant phyla included Proteobacteria, Actinobacteria, Bacteroidetes, Cyanobacteria and Firmicutes in the snow and Proteobacteria...... could indicate lateral transfer of the merA genes. Whole genome sequencing revealed a simple mer-operon in a Flavobacterium isolate. Unique for this putative mer-operon was the regulatory element; instead of the common merR this operon was initiated by arsR, which is common for mer-operons in Archaeal...

  7. Impact of genome reduction on bacterial metabolism and its regulation.

    Science.gov (United States)

    Yus, Eva; Maier, Tobias; Michalodimitrakis, Konstantinos; van Noort, Vera; Yamada, Takuji; Chen, Wei-Hua; Wodke, Judith A H; Güell, Marc; Martínez, Sira; Bourgeois, Ronan; Kühner, Sebastian; Raineri, Emanuele; Letunic, Ivica; Kalinina, Olga V; Rode, Michaela; Herrmann, Richard; Gutiérrez-Gallego, Ricardo; Russell, Robert B; Gavin, Anne-Claude; Bork, Peer; Serrano, Luis

    2009-11-27

    To understand basic principles of bacterial metabolism organization and regulation, but also the impact of genome size, we systematically studied one of the smallest bacteria, Mycoplasma pneumoniae. A manually curated metabolic network of 189 reactions catalyzed by 129 enzymes allowed the design of a defined, minimal medium with 19 essential nutrients. More than 1300 growth curves were recorded in the presence of various nutrient concentrations. Measurements of biomass indicators, metabolites, and 13C-glucose experiments provided information on directionality, fluxes, and energetics; integration with transcription profiling enabled the global analysis of metabolic regulation. Compared with more complex bacteria, the M. pneumoniae metabolic network has a more linear topology and contains a higher fraction of multifunctional enzymes; general features such as metabolite concentrations, cellular energetics, adaptability, and global gene expression responses are similar, however.

  8. Enzymatic Reductive Dehalogenation Controls the Biosynthesis of Marine Bacterial Pyrroles.

    Science.gov (United States)

    El Gamal, Abrahim; Agarwal, Vinayak; Rahman, Imran; Moore, Bradley S

    2016-10-12

    Enzymes capable of performing dehalogenating reactions have attracted tremendous contemporary attention due to their potential application in the bioremediation of anthropogenic polyhalogenated persistent organic pollutants. Nature, in particular the marine environment, is also a prolific source of polyhalogenated organic natural products. The study of the biosynthesis of these natural products has furnished a diverse array of halogenation biocatalysts, but thus far no examples of dehalogenating enzymes have been reported from a secondary metabolic pathway. Here we show that the penultimate step in the biosynthesis of the highly brominated marine bacterial product pentabromopseudilin is catalyzed by an unusual debrominase Bmp8 that utilizes a redox thiol mechanism to remove the C-2 bromine atom of 2,3,4,5-tetrabromopyrrole to facilitate oxidative coupling to 2,4-dibromophenol. To the best of our knowledge, Bmp8 is first example of a dehalogenating enzyme from the established genetic and biochemical context of a natural product biosynthetic pathway.

  9. Formate, acetate, and propionate as substrates for sulfate reduction in sub-arctic sediments of Southwest Greenland

    DEFF Research Database (Denmark)

    Glombitza, Clemens; Jaussi, Marion; Røy, Hans;

    2015-01-01

    Volatile fatty acids (VFAs) are key intermediates in the anaerobic mineralization of organic matter in marine sediments. We studied the role of VFAs in the carbon and energy turnover in the sulfate reduction zone of sediments from the sub-arctic Godthåbsfjord (SW Greenland) and the adjacent...... continental shelf in the NE Labrador Sea. VFA porewater concentrations were measured by a new two-dimensional ion chromatography-mass spectrometry method that enabled the direct analysis of VFAs without sample pretreatment. VFA concentrations were low and surprisingly constant (4–6 μmol L−1 for formate...... to −16 kJ (mol formate)−1, −68 to −31 kJ (mol acetate)−1, and −124 to −65 kJ (mol propionate)−1. Thus, ΔGr is apparently not determining the in-situ VFA concentrations directly. However, at the bottom of the sulfate zone of the shelf station, acetoclastic sulfate reduction might operate at its energetic...

  10. Multiple sulfur isotope signatures of sulfite and thiosulfate reduction by the model dissimilatory sulfate-reducer, Desulfovibrio alaskensis str. G20

    Directory of Open Access Journals (Sweden)

    William D. Leavitt

    2014-11-01

    Full Text Available Dissimilatory sulfate reduction serves as a key metabolic carbon remineralization process in anoxic marine environments. Sulfate reducing microorganisms can impart a wide range in mass-dependent sulfur isotopic fractionation. As such, the presence and relative activity of these organisms is identifiable from geological materials. By extension, sulfur isotope records are used to infer the redox balance of marine sedimentary environments, and the oxidation state of Earth’s oceans and atmosphere. However, recent work suggests that our understanding of microbial sulfate reducers (MSRs may be missing complexity associated with the presence and role of key chemical intermediates in the reductive process. This study provides a test of proposed metabolic models of sulfate reduction by growing an axenic culture of the well-studied MSRs, Desulfovibrio alaskensis strain G20, under electron donor limited conditions on the terminal electron acceptors sulfate, sulfite or thiosulfate, and tracking the multiple S isotopic consequences of each condition set. The dissimilatory reduction of thiosulfate and sulfite produce unique minor isotope effects, as compared to the reduction of sulfate. Further, these experiments reveal a complex biochemistry associated with sulfite reduction. That is, under high sulfite concentrations, sulfur is shuttled to an intermediate pool of thiosulfate. Site-specific isotope fractionation (within thiosulfate is very large (34ε ~ 30‰ while terminal product sulfide carries only a small fractionation from the initial sulfite (34ε < 10‰: a signature similar in magnitude to sulfate and thiosulfate reduction. Together these findings show that microbial sulfate reduction (MSR is highly sensitive to the concentration of environmentally important sulfur-cycle intermediates (sulfite and thiosulfate, especially when thiosulfate and the large site-specific isotope effects are involved.

  11. RATES OF SULFATE REDUCTION AND THIOSULFATE CONSUMPTION IN A MARINE MICROBIAL MAT

    NARCIS (Netherlands)

    VISSCHER, PT; PRINS, RA; VANGEMERDEN, H

    1992-01-01

    The sulfur cycle in a microbial mat was studied by determining viable counts of sulfate-reducing bacteria, chemolithoautotrophic sulfur bacteria and anoxygenic phototrophic bacteria. All three functional groups of sulfur bacteria revealed a maximum population density in the uppermost 5 mm of the mat

  12. Toxicity of xenobiotics during sulfate, iron, and nitrate reduction in primary sewage sludge suspensions

    DEFF Research Database (Denmark)

    Elsgaard, Lars

    2010-01-01

    The effect and persistence of six organic xenobiotics was tested under sulfate-, iron-, and nitrate-reducing conditions in primary sewage sludge suspensions. The xenobiotics tested were acenaphthene, phenanthrene, di(2-ethylhexyl)phthalate (DEHP), 4-nonylphenol (4-NP), linear alkylbenzene sulfonate...

  13. Fructose-enhanced reduction of bacterial growth on nanorough surfaces

    Directory of Open Access Journals (Sweden)

    Durmus NG

    2012-02-01

    Full Text Available Naside Gozde Durmus1, Erik N Taylor1, Fatih Inci3,4, Kim M Kummer1, Keiko M Tarquinio5, Thomas J Webster1,21School of Engineering, Brown University, Providence, RI, USA; 2Department of Orthopedics, Brown University, Providence, RI, USA; 3Bio-Acoustic-MEMS in Medicine (BAMM Laboratory, Center for Biomedical Engineering, Department of Medicine, Brigham and Women's Hospital, Harvard-MIT Health Sciences and Technology, Harvard Medical School, MA, USA; 4Istanbul Technical University, Molecular Biology-Genetics and Biotechnology Program, Mobgam, Maslak, Istanbul, Turkey; 5Division of Pediatric Critical Care Medicine, Rhode Island Hospital, Providence, RI, USAAbstract: Patients on mechanical ventilators for extended periods of time often face the risk of developing ventilator-associated pneumonia. During the ventilation process, patients incapable of breathing are intubated with polyvinyl chloride (PVC endotracheal tubes (ETTs. PVC ETTs provide surfaces where bacteria can attach and proliferate from the contaminated oropharyngeal space to the sterile bronchoalveolar area. To overcome this problem, ETTs can be coated with antimicrobial agents. However, such coatings may easily delaminate during use. Recently, it has been shown that changes in material topography at the nanometer level can provide antibacterial properties. In addition, some metabolites, such as fructose, have been found to increase the efficiency of antibiotics used to treat Staphylococcus aureus (S. aureus infections. In this study, we combined the antibacterial effect of nanorough ETT topographies with sugar metabolites to decrease bacterial growth and biofilm formation on ETTs. We present for the first time that the presence of fructose on the nanorough surfaces decreases the number of planktonic S. aureus bacteria in the solution and biofilm formation on the surface after 24 hours. We thus envision that this method has the potential to impact the future of surface engineering of

  14. Sulfate reduction controlled by organic matter availability in deep sediment cores from the saline, alkaline Lake Van (Eastern Anatolia, Turkey

    Directory of Open Access Journals (Sweden)

    Clemens eGlombitza

    2013-07-01

    Full Text Available As part of the International Continental Drilling Program (ICDP deep lake drilling project PaleoVan, we investigated sulfate reduction (SR in deep sediment cores of the saline, alkaline (salinity 21.4 ‰, alkalinity 155 m mEq-1, pH 9.81 Lake Van, Turkey. The cores were retrieved in the Northern Basin (NB and at Ahlat Ridge (AR and reached a maximum depth of 220 m. Additionally, 65-75 cm long gravity cores were taken at both sites. Sulfate reduction rates (SRR were low (≤ 22 nmol cm-3 d-1 compared to lakes with higher salinity and alkalinity, indicating that salinity and alkalinity are not limiting SR in Lake Van. Both sites differ significantly in rates and depth distribution of SR. In NB, SRR are up to 10 times higher than at AR. Sulfate reduction (SR could be detected down to 19 meters below lake floor (mblf at NB and down to 13 mblf at AR. Although SRR were lower at AR than at NB, organic matter (OM concentrations were higher. In contrast, dissolved OM in the pore water at AR contained more macromolecular OM and less low molecular weight OM. We thus suggest, that OM content alone cannot be used to infer microbial activity at Lake Van but that quality of OM has an important impact as well. These differences suggest that biogeochemical processes in lacustrine sediments are reacting very sensitively to small variations in geological, physical or chemical parameters over relatively short distances. 

  15. Use of organic substrates as electron donors for biological sulfate reduction in gypsiferous mine soils from Nakhon Si Thammarat (Thailand).

    Science.gov (United States)

    Kijjanapanich, Pimluck; Annachhatre, Ajit P; Esposito, Giovanni; Lens, Piet N L

    2014-04-01

    Soils in some mining areas contain a high gypsum content, which can give adverse effects to the environment and may cause many cultivation problems, such as a low water retention capacity and low fertility. The quality of such mine soils can be improved by reducing the soil's gypsum content. This study aims to develop an appropriate in situ bioremediation technology for abbreviating the gypsum content of mine soils by using sulfate reducing bacteria (SRB). The technology was applied to a mine soil from a gypsum mine in the southern part of Thailand which contains a high sulfate content (150 g kg(-1)). Cheap organic substrates with low or no cost, such as rice husk, pig farm wastewater treatment sludge and coconut husk chips were mixed (60:20:20 by volume) and supplied to the soil as electron donors for the SRB. The highest sulfate removal efficiency of 59% was achieved in the soil mixed with 40% organic mixture, corresponding to a reduction of the soil gypsum content from 25% to 7.5%. For economic gains, this treated soil can be further used for agriculture and the produced sulfide can be recovered as the fertilizer elemental sulfur.

  16. Soil bacterial community structure responses to precipitation reduction and forest management in forest ecosystems across Germany.

    Science.gov (United States)

    Felsmann, Katja; Baudis, Mathias; Gimbel, Katharina; Kayler, Zachary E; Ellerbrock, Ruth; Bruelheide, Helge; Bruehlheide, Helge; Bruckhoff, Johannes; Welk, Erik; Puhlmann, Heike; Weiler, Markus; Gessler, Arthur; Ulrich, Andreas

    2015-01-01

    Soil microbial communities play an important role in forest ecosystem functioning, but how climate change will affect the community composition and consequently bacterial functions is poorly understood. We assessed the effects of reduced precipitation with the aim of simulating realistic future drought conditions for one growing season on the bacterial community and its relation to soil properties and forest management. We manipulated precipitation in beech and conifer forest plots managed at different levels of intensity in three different regions across Germany. The precipitation reduction decreased soil water content across the growing season by between 2 to 8% depending on plot and region. T-RFLP analysis and pyrosequencing of the 16S rRNA gene were used to study the total soil bacterial community and its active members after six months of precipitation reduction. The effect of reduced precipitation on the total bacterial community structure was negligible while significant effects could be observed for the active bacteria. However, the effect was secondary to the stronger influence of specific soil characteristics across the three regions and management selection of overstorey tree species and their respective understorey vegetation. The impact of reduced precipitation differed between the studied plots; however, we could not determine the particular parameters being able to modify the response of the active bacterial community among plots. We conclude that the moderate drought induced by the precipitation manipulation treatment started to affect the active but not the total bacterial community, which points to an adequate resistance of the soil microbial system over one growing season.

  17. Bacteria and environment: bio-remediation of chromium by sulfate-reducing bacteria; Bacteries et environnement: bioremediation du chrome par les bacteries sulfato-reductrices

    Energy Technology Data Exchange (ETDEWEB)

    Michel, C.

    2001-11-01

    Sulfate-reducing bacteria (SRB) are good candidates for the bio-decontamination of environments polluted by heavy metals (bio-remediation). These bacteria are able to reduce metals such as Cr(VI), U(VI),... into Cr(III), U(IV),... Reduced forms are less toxic and insoluble, so that they can be extracted from waters or immobilized in soils. The reduction of heavy metals by SRB is chemical (reduction involving the hydrogen sulfide produced by the metabolism) and enzymatic (reduction involving metalloproteins such as cytochromes c3). While the reduction by H{sub 2}S is well known, the enzymatic reduction by SRB was recently discovered. The aim of this work was to characterise the enzymatic reduction of chromate by SRB at a cellular and a molecular level. A best understanding of this phenomenon is needed to optimize the bio-remediation ability of SRB in bio-processes, and to select enzymes that could be used in bio-sensors. We have compared various strains of SRB for the enzymatic reduction of Cr(VI), and select Desulfomicrobium norvegicum. This strain can grow in the presence of up to 500 {mu}M Cr(VI), even if Cr(VI) induced a stress at this concentration. This strain was thus chosen for feasibility tests in bioreactors with COGEMA, and then with BRGM (european program 5. PCRDT). The Cr(VI)-reductase activity of various wild type and mutated cytochromes c3 was tested. Cytochromes c3 are poly-hemic and peri-plasmic cytochromes with low redox potentials (-200 to -400 mV). Results suggest the involvement of a negative redox potential in metal-reduction. We have thus tested the ability of other peri-plasmic redox-proteins with low redox potentials for metal-reduction. Ours results have demonstrated for the first time a Cr(VI)-reductase activity for [Fe] and [NiFe] hydrogenases, which are the physiological partners for cytochromes c3. In order to determine, at a molecular level, the reduction mechanism of metals by c3-type cytochromes, we have studied the interaction

  18. IN VITRO EVALUATION OF INTRACANAL BACTERIAL REDUCTION USING TWO DIFFERENT INSTRUMENTATION TECHNIQUES AND IRRIGATION REGIMENS

    Directory of Open Access Journals (Sweden)

    Senthilnayagam Kalyanasundaram

    2016-10-01

    Full Text Available BACKGROUND Enterococcus faecalis, a facultative anaerobic Gram-positive coccus is involved in the endodontic failures. The bacterial elimination from the infected root canal is often achieved by mechanical cleaning and shaping along with irrigants. This study compares the intracanal bacterial reduction using two instrumentation techniques and irrigation regimens. METHODS 50 extracted human mandibular bicuspid teeth with single canal were decoronated at cemento-enamel junction and pulpectomy done. Working length determined and apical foramen sealed with acrylic resin and specimens autoclaved at 1210 centigrade for 20 minutes. Samples were divided in to six groups. Group I - Hand instrumentation with 0.9% saline irrigant; Group II - Hand instrumentation with 5% sodium hypochlorite as irrigant; Group III - Rotary instrumentation with 0.9% saline irrigant; Group IV - Rotary instrumentation with 5% sodium hypochlorite as irrigant; Group V - Control-Only saline irrigation; Group VI - Samples taken immediately after sterilization. Sterilized teeth infected with E. faecalis and incubated for one day at 370 centigrade. Samples were collected from the canals before and after instrumentation and irrigation. The colony forming units were then counted and transformed to log numbers and analysed statistically. RESULTS The reduction in number of colony-forming units was statistically significant. Statistical analysis reveals bacterial reduction in the following order GIV>GIII>GII>GI>GV. CONCLUSION Bacterial reduction is higher with greater taper (0.06 mm/mm instrumentation and it is enhanced with the use of 5% sodium hypochlorite compared to 0.9% saline solution.

  19. Anaerobic oxidation of methane by sulfate in hypersaline groundwater of the Dead Sea aquifer.

    Science.gov (United States)

    Avrahamov, N; Antler, G; Yechieli, Y; Gavrieli, I; Joye, S B; Saxton, M; Turchyn, A V; Sivan, O

    2014-11-01

    Geochemical and microbial evidence points to anaerobic oxidation of methane (AOM) likely coupled with bacterial sulfate reduction in the hypersaline groundwater of the Dead Sea (DS) alluvial aquifer. Groundwater was sampled from nine boreholes drilled along the Arugot alluvial fan next to the DS. The groundwater samples were highly saline (up to 6300 mm chlorine), anoxic, and contained methane. A mass balance calculation demonstrates that the very low δ(13) CDIC in this groundwater is due to anaerobic methane oxidation. Sulfate depletion coincident with isotope enrichment of sulfur and oxygen isotopes in the sulfate suggests that sulfate reduction is associated with this AOM. DNA extraction and 16S amplicon sequencing were used to explore the microbial community present and were found to be microbial composition indicative of bacterial sulfate reducers associated with anaerobic methanotrophic archaea (ANME) driving AOM. The net sulfate reduction seems to be primarily controlled by the salinity and the available methane and is substantially lower as salinity increases (2.5 mm sulfate removal at 3000 mm chlorine but only 0.5 mm sulfate removal at 6300 mm chlorine). Low overall sulfur isotope fractionation observed ((34) ε = 17 ± 3.5‰) hints at high rates of sulfate reduction, as has been previously suggested for sulfate reduction coupled with methane oxidation. The new results demonstrate the presence of sulfate-driven AOM in terrestrial hypersaline systems and expand our understanding of how microbial life is sustained under the challenging conditions of an extremely hypersaline environment.

  20. The Role of Geoelectrical Methods in Monitoring Stimulated Sulfate-Reduction: Insights Gained From Field-Scale Experiments

    Science.gov (United States)

    Williams, K. H.; Kemna, A.; Long, P.; Druhan, J.; Hubbard, S.; Banfield, J.

    2006-12-01

    Understanding how microorganisms influence the physical and chemical properties of the subsurface is hindered by our inability to observe microbial dynamics in real time and with high spatial resolution. Here we investigate the use of time-lapse geoelectrical methods to monitor stimulated sulfate-reduction at the field scale during in-situ acetate amendment at the Rifle, Colorado uranium mill tailings site. Modification of the pore fluid and sediment composition as a result of bisulfide production and mineral precipitation was concomitant with changes in induced polarization (IP) and self-potential (SP) signals. With data collected from both the surface and between boreholes, temporal variations in the IP response were characterized by the development of pronounced phase anomalies related to the precipitation of disordered mackinawite (FeS). Sediment samples recovered from the aquifer showed a close correlation between the location of the IP phase anomalies and the enrichment of acid volatile sulfides. Variations in borehole SP signals closely tracked the onset of sulfate-reduction and primarily resulted from an increase in the concentration of bisulfide adjacent to the measurement electrodes. The magnitude of the SP response was dominated by the galvanic interaction of metallic copper and bisulfide, and it closely approximated the electrochemical cell potential of the anodic and cathodic reactions occurring at the electrode surfaces. Both geolectrical techniques delineated spatially discrete anomalies that appear to reflect the interaction of biostimulation with lithological variability within the aquifer.

  1. Effect of dissimilatory iron and sulfate reduction on arsenic dynamics in the wetland rhizosphere and its bioaccumulation in plants

    Science.gov (United States)

    Jaffe, P. R.; Zhang, Z.; Moon, H. S.; Myneni, S.

    2015-12-01

    The mobility of arsenic in soils is linked to biogeochemical redox processes. The presence of wetland plants in riparian wetlands has a significant impact on the biogeochemical dynamics of the soil/sediment-redoxcline due to the release of root exudates and root turnover and oxygen transfer from the roots into the surrounding sediment. Micro-environmental redox conditions in the rhizosphere affect As, Fe, and S speciation as well as Fe(III) plaque deposition, which affects arsenic transport and uptake by plants. To investigate the dynamics of As coupled to S and Fe cycling in wetlands, mesocosms were operated in a greenhouse under various conditions (high and low Fe, high and low sulfate, with plant and without plants) for four months. Results show that the presence of plants, high Fe, and high SO42- levels enhanced As sequestration in these soils. We hypothesize that this compounding effect is because plants release biodegradable organic carbon, which is used by microorganism to reduce ferrihydrite and SO42- to generate FeS, FeS2, and/or orpiment (As2S3). Over the concentration range studied, As immobilization in soil and uptake by Scirpus actus was mainly controlled by SO42- rather than Fe levels. Under high sulfate levels, As immobilization in soil increased by 50% and As concentrations in plant roots increased by 97%, whereas no significant changes in plant As levels were seen for varying Fe concentrations. More than 80% of As was sequestrated in soils rather than plant uptake. Pore water As speciation analyses indicate that 20% more As(V) was reduced to As(III) under high sulfate as than low sulfate levels and that low Fe was more favorable to the As dissimilatory reduction. More dissimilatory arsenate-respiring bacteria (DARB) under high sulfate were confirmed by quantitative PCR. Arsenic distribution in plant leafs and roots after 30 days of exposure to As was analyzed via Synchrotron X-ray fluorescence analyses. The uptake of As by plants was distributed

  2. Bacterial disproportionation of elemental sulfur coupled to chemical reduction of iron or manganese

    DEFF Research Database (Denmark)

    Thamdrup, Bo; Finster, Kai; Hansen, Jens Würgler;

    1993-01-01

    and pyrite was observed. The transformations were accompanied by growth of slightly curved, rod-shaped bacteria. The quantification of the products revealed that S was microbially disproportionated to sulfate and sulfide, as follows: 4S + 4H(2)O --> SO(4) + 3H(2)S + 2H. Subsequent chemical reactions between...... reduction of MnO(2) to Mn. Growth of small rod-shaped bacteria was observed. When incubated without MnO(2), the culture did not grow but produced small amounts of SO(4) and H(2)S at a ratio of 1:3, indicating again a disproportionation of S. The observed microbial disproportionation of S only proceeds...

  3. Airborne bacterial reduction by spraying slightly acidic electrolyzed water in a laying-hen house.

    Science.gov (United States)

    Zheng, Weichao; Kang, Runmin; Wang, Hongning; Li, Baoming; Xu, Changwen; Wang, Shuang

    2013-10-01

    Spraying slightly acidic electrolyzed water (SAEW) has been considered as a potential approach to reduce airborne bacteria in laying-hen houses. In this study, the effects of spraying SAEW on airborne bacterial reduction were investigated in a laying-hen house as compared with using diluted didecyl dimethyl ammonium bromide (DDAB). Averaged air temperature reduced by approximate 1 degrees C and average relative humidity increased by 3% at a stable ventilation rate (about 2.5 m3 hr(-1) per bird) in the laying-hen house 30 min after spraying (120 mL m(-2)). Compared with the control without spraying, the airborne bacterial concentration was reduced by about 0.70 and 0.37 log10 colony-forming units (CFU) m(-3) in the 4 hr after spraying 120 mL m(-2) SAEW (available chlorine concentration [ACC] of 156 mg L(-1)) and diluted DDAB (active compound concentration of 167 mg L(-1)), respectively. Compared with spraying diluted DDAB, spraying SAEW was determined to be more effective for reducing airborne bacterial in laying-hen houses. The effects of spraying SAEW and diluted DDAB on airborne bacterial reduction in the laying-hen house increased with the increasing available chlorine concentrations for SAEW (156, 206, 262 mg L(-1)) and increasing active compound concentrations for diluted DDAB (167, 333, 500 mg L(-1)), respectively. Spraying SAEW and diluted DDAB with two levels of spraying volumes (120 and 90 mL m(-2)) both showed significant differences on airborne bacterial reduction in the laying-hen house (P < 0.05).

  4. Effect of methanogenic substrates on anaerobic oxidation of methane and sulfate reduction by an anaerobic methanotrophic enrichment.

    KAUST Repository

    Meulepas, Roel J W

    2010-05-06

    Anaerobic oxidation of methane (AOM) coupled to sulfate reduction (SR) is assumed to be a syntrophic process, in which methanotrophic archaea produce an interspecies electron carrier (IEC), which is subsequently utilized by sulfate-reducing bacteria. In this paper, six methanogenic substrates are tested as candidate-IECs by assessing their effect on AOM and SR by an anaerobic methanotrophic enrichment. The presence of acetate, formate or hydrogen enhanced SR, but did not inhibit AOM, nor did these substrates trigger methanogenesis. Carbon monoxide also enhanced SR but slightly inhibited AOM. Methanol did not enhance SR nor did it inhibit AOM, and methanethiol inhibited both SR and AOM completely. Subsequently, it was calculated at which candidate-IEC concentrations no more Gibbs free energy can be conserved from their production from methane at the applied conditions. These concentrations were at least 1,000 times lower can the final candidate-IEC concentration in the bulk liquid. Therefore, the tested candidate-IECs could not have been produced from methane during the incubations. Hence, acetate, formate, methanol, carbon monoxide, and hydrogen can be excluded as sole IEC in AOM coupled to SR. Methanethiol did inhibit AOM and can therefore not be excluded as IEC by this study.

  5. Bacterial reduction of alcohol-based liquid and gel products on hands soiled with blood.

    Science.gov (United States)

    Kawagoe, Julia Y; Graziano, Kazuko Uchikawa; Martino, Marines Dalla Valle; Siqueira, Itacy; Correa, Luci

    2011-11-01

    The antibacterial efficacy of three alcohol-based products (liquid and gel) were tested on the hands with blood and contaminated with Serratia marcescens (ATCC 14756), using EN 1500 procedures in 14 healthy volunteers. The alcohol-based products tested, either gel or liquid-based, reached bacterial reduction levels higher than 99.9% in the presence of blood and did not differ significantly (ANOVA test; P = 0.614).

  6. Sulfation and Desulfation Behavior of Pt-BaO/MgO-Al2O3 NOx Storage Reduction Catalyst.

    Science.gov (United States)

    Jeong, Soyeon; Kim, Do Heui

    2016-05-01

    The comparative study between Pt-BaO/Al2O3 and Pt-BaO/MgO-Al2O3 gives the information about the effect of MgO addition to Al2O3 support on the sulfation and desulfation behavior of Pt-BaO/MgO-Al2O3 NOx storage reduction catalyst. The sulfated two samples were analyzed by using element analysis (EA), X-ray diffraction (XRD), H2 temperature programmed reaction (H2 TPRX) and NOx uptake measurement. The amount of sulfur uptake on 2 wt% Pt-20 wt% BaO/Al2O3 and 2 wt% Pt-20 wt% BaO/MgO-Al2O3 are almost identical as 0.45 and 0.40 of S/Ba, respectively, which yields the drastic decrease in NOx uptake for both sulfated samples. However, after desulfa- tion with H2 at 600 degrees C, the residual sulfur amount on MgO-Al2O3 supported catalyst is three times larger than that on Al2O3 supported one, indicating that sulfur species formed on the former are more stable than those on the latter. It is also well corresponding to the H2 TPRX results where the main H2S peak from MgO-Al2O3 supported sample is observed at higher temperature than Al2O3 supported one, resulting in the lower NOx uptake activity of former sample than the latter one. Meanwhile, after desulfation of MgO-Al2O3 supported sample at 700 degrees C and 800 degrees C, the activity is recovered more significantly due to the removal of the large amount of sulfur while Al2O3 supported one decreases monotonically due to the sintering of Pt crystallite and the formation of BaAl2O4 phase. It is summarized that MgO-Al2O3 supported catalyst enhances the thermal stability of the catalyst, however, forms the stable sulfate species, which needs to be improved to develop the more sulfur resistant NSR catalyst system.

  7. Solid-solution partitioning and thionation of diphenylarsinic acid in a flooded soil under the impact of sulfate and iron reduction.

    Science.gov (United States)

    Zhu, Meng; Tu, Chen; Hu, Xuefeng; Zhang, Haibo; Zhang, Lijuan; Wei, Jing; Li, Yuan; Luo, Yongming; Christie, Peter

    2016-11-01

    Diphenylarsinic acid (DPAA) is a major organic arsenic (As) compound derived from abandoned chemical weapons. The solid-solution partitioning and transformation of DPAA in flooded soils are poorly understood but are of great concern. The identification of the mechanisms responsible for the mobilization and transformation of DPAA may help to develop effective remediation strategies. Here, soil and Fe mineral incubation experiments were carried out to elucidate the partitioning and transformation of DPAA in anoxic (without addition of sulfate or sodium lactate) and sulfide (with the addition of sulfate and sodium lactate) soil and to examine the impact of sulfate and Fe(III) reduction on these processes. Results show that DPAA was more effectively mobilized and thionated in sulfide soil than in anoxic soil. At the initial incubation stages (0-4weeks), 6.7-74.5% of the total DPAA in sulfide soil was mobilized likely by sorption competition with sodium lactate. At later incubation stage (4-8weeks), DPAA was almost completely released into the solution likely due to the near-complete Fe(III) reduction. Scanning transmission X-ray microscopy (STXM) results provide further direct evidence of elevated DPAA release coupled with Fe(III) reduction in sulfide environments. The total DPAA fraction decreased significantly to 24.5% after two weeks and reached 3.4% after eight weeks in sulfide soil, whereas no obvious elimination of DPAA occurred in anoxic soil at the initial two weeks and the total DPAA fraction decreased to 10.9% after eight weeks. This can be explained in part by the enhanced mobilization of DPAA and sulfate reduction in sulfide soil compared with anoxic soil. These results suggest that under flooded soil conditions, Fe(III) and sulfate reduction significantly promote DPAA mobilization and thionation, respectively, and we suggest that it is essential to consider both sulfate and Fe(III) reduction to further our understanding of the environmental fate of DPAA.

  8. Hexavalent Molybdenum Reduction to Mo-Blue by a Sodium-Dodecyl-Sulfate-Degrading Klebsiella oxytoca Strain DRY14

    Directory of Open Access Journals (Sweden)

    M. I. E. Halmi

    2013-01-01

    Full Text Available Bacteria with the ability to tolerate, remove, and/or degrade several xenobiotics simultaneously are urgently needed for remediation of polluted sites. A previously isolated bacterium with sodium dodecyl sulfate- (SDS- degrading capacity was found to be able to reduce molybdenum to the nontoxic molybdenum blue. The optimal pH, carbon source, molybdate concentration, and temperature supporting molybdate reduction were pH 7.0, glucose at 1.5% (w/v, between 25 and 30 mM, and 25°C, respectively. The optimum phosphate concentration for molybdate reduction was 5 mM. The Mo-blue produced exhibits an absorption spectrum with a maximum peak at 865 nm and a shoulder at 700 nm. None of the respiratory inhibitors tested showed any inhibition to the molybdenum-reducing activity suggesting that the electron transport system of this bacterium is not the site of molybdenum reduction. Chromium, cadmium, silver, copper, mercury, and lead caused approximately 77, 65, 77, 89, 80, and 80% inhibition of the molybdenum-reducing activity, respectively. Ferrous and stannous ions markedly increased the activity of molybdenum-reducing activity in this bacterium. The maximum tolerable concentration of SDS as a cocontaminant was 3 g/L. The characteristics of this bacterium make it a suitable candidate for molybdenum bioremediation of sites cocontaminated with detergent pollutant.

  9. Isotopic evidence for water-column denitrification and sulfate reduction at the end-Guadalupian (Middle Permian)

    Science.gov (United States)

    Saitoh, Masafumi; Ueno, Yuichiro; Isozaki, Yukio; Nishizawa, Manabu; Shozugawa, Katsumi; Kawamura, Tetsuya; Yao, Jianxin; Ji, Zhansheng; Takai, Ken; Yoshida, Naohiro; Matsuo, Motoyuki

    2014-12-01

    The total nitrogen and pyrite sulfur isotopic compositions of the Guadalupian-Lopingian (Middle-Upper Permian) shelf carbonates are analyzed at Chaotian in northern Sichuan, South China, to clarify the environmental changes in the relatively deep disphotic zone (generally deeper than 150 m) in the ocean at the end-Guadalupian, focusing on the possible relationships with the deep-sea oxygen depletion and the shallow-sea extinction. At Chaotian, the Guadalupian Maokou Formation and the Early Lopingian Wujiaping Formation are primarily composed of bioclastic limestone of shallow-water facies, although the topmost part of the Maokou Formation (ca. 11 m thick) is composed of bedded black mudstone and chert that was deposited on the disphotic slope/basin under anoxic conditions. Substantially high δ15N values of total nitrogen (up to + 14‰) in the topmost Maokou Formation of the deep-water facies indicate water-mass denitrification. In the same disphotic interval, the consistently low δ34S values of pyrite (ca. - 37‰) suggest sulfate reduction in the sulfate-rich water column. The new nitrogen and sulfur isotopic records at Chaotian indicate the enhanced anaerobic respiration in the oxygen-depleted disphotic zone in the Late Guadalupian in northwestern South China. The active water-column sulfate reduction likely resulted in the emergence of a sulfidic deep-water mass on the disphotic slope/basin, which is supported by the high proportions of pyrite Fe to highly reactive Fe in the rocks shown using 57Fe Mössbauer spectroscopy. The anaerobic respiration in the disphotic zone at the end-Guadalupian may have been enhanced by an expansion of the oxygen minimum zone (OMZ) caused by the increased primary productivity in the surface oceans; the OMZ expansion may have corresponded to the onset of prolonged oxygen depletion in the deep sea. The clear stratigraphic relationship at Chaotian shows the emergence of the sulfidic deep-waters preceding the extinction, implying

  10. Effect of the deletion of qmoABC and the promoter distal gene encoding a hypothetical protein on sulfate-reduction in Desulfovibrio vulgaris Hildenborough

    Energy Technology Data Exchange (ETDEWEB)

    Zane, Grant M.; Yen, Huei-chi Bill; Wall, Judy D.

    2010-03-18

    The pathway of electrons required for the reduction of sulfate in sulfate-reducing bacteria (SRB) is not yet fully characterized. In order to determine the role of a transmembrane protein complex suggested to be involved in this process, a deletion of Desulfovibrio vulgaris Hildenborough was created by marker exchange mutagenesis that eliminated four genes putatively encoding the QmoABC complex and a hypothetical protein (DVU0851). The Qmo complex (quinone-interacting membrane-bound oxidoreductase) is proposed to be responsible for transporting electrons to the dissimilatory adenosine-5?phosphosulfate (APS) reductase in SRB. In support of the predicted role of this complex, the deletion mutant was unable to grow using sulfate as its sole electron acceptor with a range of electron donors. To explore a possible role for the hypothetical protein in sulfate reduction, a second mutant was constructed that had lost only the gene that codes for DVU0851. The second constructed mutant grew with sulfate as the sole electron acceptor; however, there was a lag that was not present with the wild-type or complemented strain. Neither deletion strain was significantly impaired for growth with sulfite or thiosulfate as terminal electron acceptor. Complementation of the D(qmoABC-DVU0851) mutant with all four genes or only the qmoABC genes restored its ability to grow by sulfate respiration. These results confirmed the prediction that the Qmo complex is in the electron pathway for sulfate-reduction and revealed that no other transmembrane complex could compensate when Qmo was lacking.

  11. Fast and sensitive optical toxicity bioassay based on dual wavelength analysis of bacterial ferricyanide reduction kinetics.

    Science.gov (United States)

    Pujol-Vila, F; Vigués, N; Díaz-González, M; Muñoz-Berbel, X; Mas, J

    2015-05-15

    Global urban and industrial growth, with the associated environmental contamination, is promoting the development of rapid and inexpensive general toxicity methods. Current microbial methodologies for general toxicity determination rely on either bioluminescent bacteria and specific medium solution (i.e. Microtox(®)) or low sensitivity and diffusion limited protocols (i.e. amperometric microbial respirometry). In this work, fast and sensitive optical toxicity bioassay based on dual wavelength analysis of bacterial ferricyanide reduction kinetics is presented, using Escherichia coli as a bacterial model. Ferricyanide reduction kinetic analysis (variation of ferricyanide absorption with time), much more sensitive than single absorbance measurements, allowed for direct and fast toxicity determination without pre-incubation steps (assay time=10 min) and minimizing biomass interference. Dual wavelength analysis at 405 (ferricyanide and biomass) and 550 nm (biomass), allowed for ferricyanide monitoring without interference of biomass scattering. On the other hand, refractive index (RI) matching with saccharose reduced bacterial light scattering around 50%, expanding the analytical linear range in the determination of absorbent molecules. With this method, different toxicants such as metals and organic compounds were analyzed with good sensitivities. Half maximal effective concentrations (EC50) obtained after 10 min bioassay, 2.9, 1.0, 0.7 and 18.3 mg L(-1) for copper, zinc, acetic acid and 2-phenylethanol respectively, were in agreement with previously reported values for longer bioassays (around 60 min). This method represents a promising alternative for fast and sensitive water toxicity monitoring, opening the possibility of quick in situ analysis.

  12. Evaluation of Radiation Dose Reduction during CT Scans Using Oxide Bismuth and Nano-Barium Sulfate Shields

    CERN Document Server

    Seoung, Youl-Hun

    2015-01-01

    The purpose of the present study was to evaluate radiation dose reduction and image quality during CT scanning by using a new dose reduction fiber sheet (DRFS) with commercially available bismuth shields. These DRFS were composed of nano-barium sulfate (BaSO4), filling the gaps left by the large oxide bismuth (Bi2O3) particle sizes. The radiation dose was measured five times at directionss of 12 o'clock from the center of the polymethyl methacrylate (PMMA) head phantom to calculate an average value using a CT ionization chamber. The image quality measured CT transverse images of the PMMA head phantom depending on X-ray tube voltages and the type of shielding. Two regions of interest in CT transverse images were chosen from the right and left areas under the surface of the PMMA head phantom and from ion chamber holes located at directions of 12 o'clock from the center of the PMMA head phantom. The results of this study showed that the new DRFS shields could reduce dosages to 15.61%, 23.05%, and 22.71% more in ...

  13. Effect of COD/SO42- ratio and sulfide on thermophilic (55°C) sulfate reduction during the acidification of sucrose at pH 6

    NARCIS (Netherlands)

    Lopes, S.I.C.; Wang, X.; Capela, M.I.; Lens, P.N.L.

    2007-01-01

    This study investigated the effect of the COD/SO42¿ ratio (4 and 1) and the sulfide concentration on the performance of thermophilic (55 °C) acidifying (pH 6) upflow anaerobic sludge bed reactors fed with sucrose at an organic loading rate of 4.5 g COD lreactor¿1 day¿1. Sulfate reduction efficiencie

  14. TREATMENT OF HEXAVALENT CHROMIUM IN CHROMITE ORE PROCESSING SOLID WASTE USING A MIXED REDUCTANT SOLUTION OF FERROUS SULFATE AND SODIUM DITHIONITE

    Science.gov (United States)

    We developed a method for disseminating ferrous iron in the subsurface to enhance chemical reduction of hexavalent chromium (Cr(VI)) in a chromite ore processing solid waste derived from the production of ferrochrome alloy. The method utilizes ferrous sulfate (FeSO4) in combinati...

  15. Studies on the pore water sulfate, chloride and sedimentary methane to understand the sulfate reduction process in the eastern Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Karisiddaiah, S.M.; Borole, D.V.; Rao, B.R.; Paropkari, A.L.; Joao, H.M.; Kocherla, M.; Sarkar, G.P.; Biswas, G.; Kumar, N.

    Sediment cores (~5 m length) from ten stations collected in the water depths of 2665-3210 m in the eastern Arabian Sea were studied for pore water sulfate (SO42-), chloride (Cl-) and lighter-hydrocarbons (methane: C1, ethane:C2 and propane: C3...

  16. Surface Treatments and Functional Coatings for Biocompatibility Improvement and Bacterial Adhesion Reduction in Dental Implantology

    Directory of Open Access Journals (Sweden)

    Pietro Mandracci

    2016-01-01

    Full Text Available Surface modification of dental implants is a key process in the production of these medical devices, and especially titanium implants used in the dental practice are commonly subjected to surface modification processes before their clinical use. A wide range of treatments, such as sand blasting, acid etching, plasma etching, plasma spray deposition, sputtering deposition and cathodic arc deposition, have been studied over the years in order to improve the performance of dental implants. Improving or accelerating the osseointegration process is usually the main goal of these surface processes, but the improvement of biocompatibility and the prevention of bacterial adhesion are also of considerable importance. In this review, we report on the research of the recent years in the field of surface treatments and coatings deposition for the improvement of dental implants performance, with a main focus on the osseointegration acceleration, the reduction of bacterial adhesion and the improvement of biocompatibility.

  17. Microbial sulfate reduction and the sulfur budget for a complete section of altered oceanic basalts, IODP Hole 1256D (eastern Pacific)

    Science.gov (United States)

    Alt, Jeffrey C.; Shanks, Wayne C.

    2011-01-01

    Sulfide mineralogy and the contents and isotope compositions of sulfur were analyzed in a complete oceanic volcanic section from IODP Hole 1256D in the eastern Pacific, in order to investigate the role of microbes and their effect on the sulfur budget in altered upper oceanic crust. Basalts in the 800m thick volcanic section are affected by a pervasive low-temperature background alteration and have mean sulfur contents of 530ppm, reflecting loss of sulfur relative to fresh glass through degassing during eruption and alteration by seawater. Alteration halos along fractures average 155ppm sulfur and are more oxidized, have high SO4/ΣS ratios (0.43), and lost sulfur through oxidation by seawater compared to host rocks. Although sulfur was lost locally, sulfur was subsequently gained through fixation of seawater-derived sulfur in secondary pyrite and marcasite in veins and in concentrations at the boundary between alteration halos and host rocks. Negative δ34Ssulfide-S values (down to -30 °) and low temperatures of alteration (down to ~40 °C) point to microbial reduction of seawater sulfate as the process resulting in local additions of sulfide-S. Mass balance calculations indicate that 15-20% of the sulfur in the volcanic section is microbially derived, with the bulk altered volcanic section containing 940ppm S, and with δ34S shifted to -6.0‰) from the mantle value (0 ‰). The bulk volcanic section may have gained or lost sulfur overall. The annual flux of microbial sulfur into oceanic basement based on Hole 1256D is 3-4 X1010molSyr-1, within an order of magnitude of the riverine sulfate source and the sedimentary pyrite sink. Results indicate a flux of bacterially derived sulfur that is fixed in upper ocean basement of 7-8 X 10-8molcm-2yr-1 over 15m.y. This is comparable to that in open ocean sediment sites, but is one to two orders of magnitude less than for ocean margin sediments. The global annual subduction of sulfur in altered oceanic basalt lavas based

  18. Effect of sulfate on the methanogenic activity of a bacterial culture from a brewery Wastewater during glucose degradation

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The maximum specific methanogenic activity (SMA) of a sludge originating from a brewery wastewater treatment plant on the degradation of glucose was investigated at various levels of sulfate on a specific loading basis. Batch experiments were conducted in serum bottles at pH 7 and 35℃.A comparison of the values indicates that the SMA of this mixed culture was increased and reached its highest level of 0.128g CH4 gas COD/(g VSS·d)when biomass was in contact with sulfate at a ratio of 1:0.114 by weight.

  19. Bacterial communities in haloalkaliphilic sulfate-reducing bioreactors under different electron donors revealed by 16S rRNA MiSeq sequencing

    Energy Technology Data Exchange (ETDEWEB)

    Zhou, Jiemin [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, P.O. Box 353, Beijing 100190 (China); University of Chinese Academy of Sciences, Beijing 100049 (China); Zhou, Xuemei; Li, Yuguang [101 Institute, Ministry of Civil Affairs, Beijing 100070 (China); Xing, Jianmin, E-mail: jmxing@ipe.ac.cn [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, P.O. Box 353, Beijing 100190 (China)

    2015-09-15

    Highlights: • Bacterial communities of haloalkaliphilic bioreactors were investigated. • MiSeq was first used in analysis of communities of haloalkaliphilic bioreactors. • Electron donors had significant effect on bacterial communities. - Abstract: Biological technology used to treat flue gas is useful to replace conventional treatment, but there is sulfide inhibition. However, no sulfide toxicity effect was observed in haloalkaliphilic bioreactors. The performance of the ethanol-fed bioreactor was better than that of lactate-, glucose-, and formate-fed bioreactor, respectively. To support this result strongly, Illumina MiSeq paired-end sequencing of 16S rRNA gene was applied to investigate the bacterial communities. A total of 389,971 effective sequences were obtained and all of them were assigned to 10,220 operational taxonomic units (OTUs) at a 97% similarity. Bacterial communities in the glucose-fed bioreactor showed the greatest richness and evenness. The highest relative abundance of sulfate-reducing bacteria (SRB) was found in the ethanol-fed bioreactor, which can explain why the performance of the ethanol-fed bioreactor was the best. Different types of SRB, sulfur-oxidizing bacteria, and sulfur-reducing bacteria were detected, indicating that sulfur may be cycled among these microorganisms. Because high-throughput 16S rRNA gene paired-end sequencing has improved resolution of bacterial community analysis, many rare microorganisms were detected, such as Halanaerobium, Halothiobacillus, Desulfonatronum, Syntrophobacter, and Fusibacter. 16S rRNA gene sequencing of these bacteria would provide more functional and phylogenetic information about the bacterial communities.

  20. Bacterially mediated removal of phosphorus and cycling of nitrate and sulfate in the waste stream of a "zero-discharge" recirculating mariculture system.

    Science.gov (United States)

    Krom, M D; Ben David, A; Ingall, E D; Benning, L G; Clerici, S; Bottrell, S; Davies, C; Potts, N J; Mortimer, R J G; van Rijn, J

    2014-06-01

    Simultaneous removal of nitrogen and phosphorus by microbial biofilters has been used in a variety of water treatment systems including treatment systems in aquaculture. In this study, phosphorus, nitrate and sulfate cycling in the anaerobic loop of a zero-discharge, recirculating mariculture system was investigated using detailed geochemical measurements in the sludge layer of the digestion basin. High concentrations of nitrate and sulfate, circulating in the overlying water (∼15 mM), were removed by microbial respiration in the sludge resulting in a sulfide accumulation of up to 3 mM. Modelling of the observed S and O isotopic ratios in the surface sludge suggested that, with time, major respiration processes shifted from heterotrophic nitrate and sulfate reduction to autotrophic nitrate reduction. The much higher inorganic P content of the sludge relative to the fish feces is attributed to conversion of organic P to authigenic apatite. This conclusion is supported by: (a) X-ray diffraction analyses, which pointed to an accumulation of a calcium phosphate mineral phase that was different from P phases found in the feces, (b) the calculation that the pore waters of the sludge were highly oversaturated with respect to hydroxyapatite (saturation index = 4.87) and (c) there was a decrease in phosphate (and in the Ca/Na molar ratio) in the pore waters simultaneous with an increase in ammonia showing there had to be an additional P removal process at the same time as the heterotrophic breakdown of organic matter.

  1. Metagenome reveals potential microbial degradation of hydrocarbon coupled with sulfate reduction in an oil-immersed chimney from Guaymas Basin

    Directory of Open Access Journals (Sweden)

    Ying eHe

    2013-06-01

    Full Text Available Deep-sea hydrothermal vent chimneys contain a high diversity of microorganisms, yet the metabolic activity and the ecological functions of the microbial communities remain largely unexplored. In this study, a metagenomic approach was applied to characterize the metabolic potential in a Guaymas hydrothermal vent chimney and to conduct comparative genomic analysis among a variety of environments with sequenced metagenomes. Complete clustering of functional gene categories with a comparative metagenomic approach showed that this Guaymas chimney metagenome was clustered most closely with a chimney metagenome from Juan de Fuca. All chimney samples were enriched with genes involved in recombination and repair, chemotaxis and flagellar assembly, highlighting their roles in coping with the fluctuating extreme deep-sea environments. A high proportion of transposases was observed in all the metagenomes from deep-sea chimneys, supporting the previous hypothesis that horizontal gene transfer may be common in the deep-sea vent chimney biosphere. In the Guaymas chimney metagenome, thermophilic sulfate reducing microorganisms including bacteria and archaea were found predominant, and genes coding for the degradation of refractory organic compounds such as cellulose, lipid, pullullan, as well as a few hydrocarbons including toluene, ethylbenzene and o-xylene were identified. Therefore, this oil-immersed chimney supported a thermophilic microbial community capable of oxidizing a range of hydrocarbons that served as electron donors for sulphate reduction under anaerobic conditions.

  2. The effect of atmospheric sulfate reductions on diffuse radiation and photosynthesis in the United States during 1995-2013

    Science.gov (United States)

    Keppel-Aleks, G.; Washenfelder, R. A.

    2016-09-01

    Aerosol optical depth (AOD) has been shown to influence the global carbon sink by increasing the fraction of diffuse light, which increases photosynthesis over a greater fraction of the vegetated canopy. Between 1995 and 2013, U.S. SO2 emissions declined by over 70%, coinciding with observed AOD reductions of 3.0 ± 0.6% yr-1 over the eastern U.S. In the Community Earth System Model (CESM), these trends cause diffuse light to decrease regionally by almost 0.6% yr-1, leading to declines in gross primary production (GPP) of 0.07% yr-1. Integrated over the analysis period and domain, this represents 0.5 Pg C of omitted GPP. A separate upscaling calculation that used published relationships between GPP and diffuse light agreed with the CESM model results within 20%. The agreement between simulated and data-constrained upscaling results strongly suggests that anthropogenic sulfate trends have a small impact on carbon uptake in temperate forests due to scattered light.

  3. Halomonas desiderata as a bacterial model to predict the possible biological nitrate reduction in concrete cells of nuclear waste disposals.

    Science.gov (United States)

    Alquier, Marjorie; Kassim, Caroline; Bertron, Alexandra; Sablayrolles, Caroline; Rafrafi, Yan; Albrecht, Achim; Erable, Benjamin

    2014-01-01

    After closure of a waste disposal cell in a repository for radioactive waste, resaturation is likely to cause the release of soluble species contained in cement and bituminous matrices, such as ionic species (nitrates, sulfates, calcium and alkaline ions, etc.), organic matter (mainly organic acids), or gases (from steel containers and reinforced concrete structures as well as from radiolysis within the waste packages). However, in the presence of nitrates in the near-field of waste, the waste cell can initiate oxidative conditions leading to enhanced mobility of redox-sensitive radionuclides (RN). In biotic conditions and in the presence of organic matter and/or hydrogen as electron donors, nitrates may be microbiologically reduced, allowing a return to reducing conditions that promote the safety of storage. Our work aims to analyze the possible microbial reactivity of nitrates at the bitumen - concrete interface in conditions as close as possible to radioactive waste storage conditions in order (i) to evaluate the nitrate reaction kinetics; (ii) to identify the by-products (NO2(-), NH4(+), N2, N2O, etc.); and (iii) to discriminate between the roles of planktonic bacteria and those adhering as a biofilm structure in the denitrifying activity. Leaching experiments on solid matrices (bitumen and cement pastes) were first implemented to define the physicochemical conditions that microorganisms are likely to meet at the bitumen-concrete interface, e.g. highly alkaline pH conditions (10 < pH < 11) imposed by the cement matrix. The screening of a range of anaerobic denitrifying bacterial strains led us to select Halomonas desiderata as a model bacterium capable of catalyzing the reaction of nitrate reduction in these particular conditions of pH. The denitrifying activity of H. desiderata was quantified in a batch bioreactor in the presence of solid matrices and/or leachate from bitumen and cement matrices. Denitrification was relatively fast in the presence of cement

  4. Effect of liming on sulfate transformation and sulfur gas emissions in degraded vegetable soil treated by reductive soil disinfestation.

    Science.gov (United States)

    Meng, Tianzhu; Zhu, Tongbin; Zhang, Jinbo; Cai, Zucong

    2015-10-01

    Reductive soil disinfestation (RSD), namely amending organic materials and mulching or flooding to create strong reductive status, has been widely applied to improve degraded soils. However, there is little information available about sulfate (SO4(2-)) transformation and sulfur (S) gas emissions during RSD treatment to degraded vegetable soils, in which S is generally accumulated. To investigate the effects of liming on SO4(2-) transformation and S gas emissions, two SO4(2-)-accumulated vegetable soils (denoted as S1 and S2) were treated by RSD, and RSD plus lime, denoted as RSD0 and RSD1, respectively. The results showed that RSD0 treatment reduced soil SO4(2-) by 51% and 61% in S1 and S2, respectively. The disappeared SO4(2-) was mainly transformed into the undissolved form. During RSD treatment, hydrogen sulfide (H2S), carbonyl sulfide (COS), and dimethyl sulfide (DMS) were detected, but the total S gas emission accounted for soils. Compared to RSD0, lime addition stimulated the conversion of SO4(2-) into undissolved form, reduced soil SO4(2-) by 81% in S1 and 84% in S2 and reduced total S gas emissions by 32% in S1 and 57% in S2, respectively. In addition to H2S, COS and DMS, the emissions of carbon disulfide, methyl mercaptan, and dimethyl disulfide were also detected in RSD1 treatment. The results indicated that RSD was an effective method to remove SO4(2-), liming stimulates the conversion of dissolved SO4(2-) into undissolved form, probably due to the precipitation with calcium.

  5. The early stage of bacterial genome-reductive evolution in the host.

    Directory of Open Access Journals (Sweden)

    Han Song

    2010-05-01

    Full Text Available The equine-associated obligate pathogen Burkholderia mallei was developed by reductive evolution involving a substantial portion of the genome from Burkholderia pseudomallei, a free-living opportunistic pathogen. With its short history of divergence (approximately 3.5 myr, B. mallei provides an excellent resource to study the early steps in bacterial genome reductive evolution in the host. By examining 20 genomes of B. mallei and B. pseudomallei, we found that stepwise massive expansion of IS (insertion sequence elements ISBma1, ISBma2, and IS407A occurred during the evolution of B. mallei. Each element proliferated through the sites where its target selection preference was met. Then, ISBma1 and ISBma2 contributed to the further spread of IS407A by providing secondary insertion sites. This spread increased genomic deletions and rearrangements, which were predominantly mediated by IS407A. There were also nucleotide-level disruptions in a large number of genes. However, no significant signs of erosion were yet noted in these genes. Intriguingly, all these genomic modifications did not seriously alter the gene expression patterns inherited from B. pseudomallei. This efficient and elaborate genomic transition was enabled largely through the formation of the highly flexible IS-blended genome and the guidance by selective forces in the host. The detailed IS intervention, unveiled for the first time in this study, may represent the key component of a general mechanism for early bacterial evolution in the host.

  6. Photodynamic therapy on bacterial reduction in dental caries: in vivo study

    Science.gov (United States)

    Baptista, Alessandra; Araujo Prates, Renato; Kato, Ilka Tiemy; Amaral, Marcello Magri; Zanardi de Freitas, Anderson; Simões Ribeiro, Martha

    2010-04-01

    The reduction of pathogenic microorganisms in supragingival plaque is one of the principal factors in caries prevention and control. A large number of microorganisms have been reported to be inactivated in vitro by photodynamic therapy (PDT). The purpose of this study was to develop a rat model to investigate the effects of PDT on bacterial reduction in induced dental caries. Twenty four rats were orally inoculated with Streptococcus mutans cells (ATCC 25175) for three consecutive days. The animals were fed with a cariogenic diet and water with 10% of sucrose ad libitum, during all experimental period. Caries lesion formation was confirmed by Optical Coherence Tomography (OCT) 5 days after the beginning of the experiment. Then, the animals were randomly divided into two groups: Control Group: twelve animals were untreated by either light or photosensitizer; and PDT Group: twelve animals were treated with 100μM of methylene blue for 5min and irradiated by a Light Emitting Diode (LED) at λ = 640+/-30nm, fluence of 172J/cm2, output power of 240mW, and exposure time of 3min. Microbiological samples were collected before, immediately after, 3, 7 and 10 days after treatment and the number of total microaerophiles was counted. OCT images showed areas of enamel demineralization on rat molars. Microbiological analysis showed a significant bacterial reduction after PDT. Furthermore, the number of total microaerophiles in PDT group remained lower than control group until 10 days posttreatment. These findings suggest that PDT could be an alternative approach to reduce bacteria in dental caries.

  7. Cold Plasma Inactivation of Bacterial Biofilms and Reduction of Quorum Sensing Regulated Virulence Factors.

    Directory of Open Access Journals (Sweden)

    Dana Ziuzina

    Full Text Available The main objectives of this work were to investigate the effect of atmospheric cold plasma (ACP against a range of microbial biofilms commonly implicated in foodborne and healthcare associated human infections and against P. aeruginosa quorum sensing (QS-regulated virulence factors, such as pyocyanin, elastase (Las B and biofilm formation capacity post-ACP treatment. The effect of processing factors, namely treatment time and mode of plasma exposure on antimicrobial activity of ACP were also examined. Antibiofilm activity was assessed for E. coli, L. monocytogenes and S. aureus in terms of reduction of culturability and retention of metabolic activity using colony count and XTT assays, respectively. All samples were treated 'inpack' using sealed polypropylene containers with a high voltage dielectric barrier discharge ACP generated at 80 kV for 0, 60, 120 and 300 s and a post treatment storage time of 24 h. According to colony counts, ACP treatment for 60 s reduced populations of E. coli to undetectable levels, whereas 300 s was necessary to significantly reduce populations of L. monocytogenes and S. aureus biofilms. The results obtained from XTT assay indicated possible induction of viable but non culturable state of bacteria. With respect to P. aeruginosa QS-related virulence factors, the production of pyocyanin was significantly inhibited after short treatment times, but reduction of elastase was notable only after 300 s and no reduction in actual biofilm formation was achieved post-ACP treatment. Importantly, reduction of virulence factors was associated with reduction of the cytotoxic effects of the bacterial supernatant on CHO-K1 cells, regardless of mode and duration of treatment. The results of this study point to ACP technology as an effective strategy for inactivation of established biofilms and may play an important role in attenuation of virulence of pathogenic bacteria. Further investigation is warranted to propose direct evidence

  8. Uranium isotopic fractionation factors during U(VI) reduction by bacterial isolates

    Science.gov (United States)

    Basu, Anirban; Sanford, Robert A.; Johnson, Thomas M.; Lundstrom, Craig C.; Löffler, Frank E.

    2014-07-01

    We experimentally determined the magnitude of uranium isotopic fractionation induced by U(VI) reduction by metal reducing bacterial isolates. Our results indicate that microbial U(VI) reduction induces isotopic fractionation; heavier isotopes (i.e., 238U) partition into the solid U(IV) products. The magnitudes of isotopic fractionation (expressed as ε = 1000‰ * (α-1)) for 238U/235U were 0.68‰ ± 0.05‰ and 0.99‰ ± 0.12‰ for Geobacter sulfurreducens strain PCA and strain IFRC-N, respectively. The ε values for Anaeromyxobacter dehalogenans strain FRC-W, strain FRC-R5, a novel Shewanella isolate, and Desulfitobacterium sp. strain Viet1 were 0.72‰ ± 0.15‰, 0.99‰ ± 0.12‰, 0.96‰ ± 0.16‰ and 0.86‰ ± 0.06‰, respectively. Our results show that the maximum ε values of ∼1.0‰ were obtained with low biomass (∼107 cells/mL) and low electron donor concentrations (∼500 μM). These results provide an initial assessment of 238U/235U shifts induced by microbially-mediated U(VI) reduction, which is needed as 238U/235U data are increasingly applied as redox indicators in various geochemical settings.

  9. Influence of Sulfation on the Catalytic Activity of Ni-ZrO2 for NO Reduction with Propane in Excess Oxygen

    Institute of Scientific and Technical Information of China (English)

    Shujuan Zhang; Landong Li; Fuxiang Zhang; Naijia Guan

    2005-01-01

    Selective catalytic reduction (SCR) of nitric oxide with propane in excess oxygen was investigated on Ni-ZrO2 (NZ) and sulfated Ni-ZrO2 (SNZ), prepared by coprecipitation from a mixture of nickel nitrate-zirconium oxychloride followed by modifying with (NH4)2SO4. It was found that sulfated Ni-ZrO2catalyst showed higher activity for the SCR of NO with propane than that of Ni-ZrO2. The structural and surface properties of catalysts were studied by XRD, BET, SEM and FT-IR of pyridine adsorption. The experimental results indicated that the modification of (NH4)2SO4 resulted in the generation of strong Bronsted and Lewis acid sites and promoted the dispersion of the Ni species, which could lead to higher NO conversion and propane efficiency in NO reduction.

  10. Sulfur cycling of intertidal Wadden Sea sediments (Konigshafen, Island of Sylt, Germany): sulfate reduction and sulfur gas emission

    Science.gov (United States)

    Kristensen, E.; Bodenbender, J.; Jensen, M. H.; Rennenberg, H.; Jensen, K. M.

    2000-05-01

    Sulfate reduction rates (SRR t) and reduced inorganic sulfur pools (RIS) in Wadden Sea sediment as well as sulfur gas emissions directly to the atmosphere were measured at intervals of 2 to 12 months from 1991 to 1994. Three stations were chosen in the intertidal embayment, Königshafen, representing the range of sediments found in the Wadden Sea: Organic-poor coarse sand, organic-poor and Arenicola marina inhabited medium sand, and organic-rich muddy sand. Maximum SRR t were 2 to 5 times higher in muddy sand than in the sandy sediments. The depth-integrated SRR t varied 12 to 13-fold on a seasonal basis at the three stations. Although temperature controls biochemical processes, the overall control is more complex due to the simultaneous influence of other seasonal factors such as availability of organic matter and oxidation level of surface sediment. The sedimentary RIS pools were low due to iron limitation and contained only 30% acid volatile sulfur (AVS). Muddy sand had up to an order of magnitude more RIS than the two sandy sediments. The turnover of RIS was rapid (turnover time from ˜1 to 32 h), fastest during summer and at the sandy stations. The emission of S-gases was dominated by H 2S during summer (45-67% of the total), and was highest in muddy and lowest in coarse sand. H 2S was less important in early spring (3-49% of the total). Other sulfur gases, such as COS, DMS and CS 2, each accounted for less than 20% of the total sulfur emissions with no specific temporal and spatial pattern. Due to the low content of metals in the sediment, the reduced sulfur pools are cycled rapidly with chemical and biological reoxidation at oxic-anoxic boundaries as a major sink. Thus, the emissions of H 2S account for less than 1‰ of the sulfide produced.

  11. Reductive Leaching of Iron from Sulfate Slag%硫酸烧渣还原浸取铁

    Institute of Scientific and Technical Information of China (English)

    金程; 李登新

    2012-01-01

    采用硫化物作助剂还原浸出硫酸烧渣中的三价铁.采用L9(43)四因素三水平正交试验,考察助剂用量、硫酸用量、温度、时间对浸出效果的影响,并确定最佳配比.结果表明:影响的显著顺序为助剂用量>时间>硫酸用量>温度.在下述最佳条件下铁浸取率可以达到87.8%:起始液固比2∶1、搅拌转速1 300 r/min、助剂用量17.2g、硫酸23 mL、85℃反应3h.%The ferric iron was reductive leached from sulfate slag with sulfide. The effects of leaching agent dosage, sulfuric acid consumption, reaction temperature and time on leaching rate of iron were investigated with L9(43) orthogonal test. The results show that the sequence of effecting is leaching agent dosage, reaction time, sulfuric acid consumption and reaction temperature. The iron leaching rate reaches 87. 8% on the following optimum conditions: ratio of liquid to solid of 2 : 1, stirring rate of 1 300 r/min, leaching a-gent dosage of 17. 2 g, sulfuric acid consumption of 23 mL, leaching temperature of 85 °C and leaching time of 3 h.

  12. 硫酸烧渣加压浸取铁%Pressure Reduction Leaching Iron from Sulfate Slag

    Institute of Scientific and Technical Information of China (English)

    金程; 王恩强; 李登新

    2011-01-01

    Ferric iron was reduction leached from sulfate slag with sulfide agent. Effects of the following factors on leaching were studied, such as, dosage of additives, sulfuric acid consumption, initial sulfuric acid concentration, reaction temperature, stirring speed, and reaction time. The results show that iron leaching rate reaches 99. 4%, efficiency of additive usage reaches 98. 9% on the following conditions: surplus coefficient of leaching agent is 1. 1, surplus coefficient of sulfuric acid is 1. 4, 3. 5 mol/L initial sulfuric acid concentration with 800 r/min stirring rate, 95 °C? 3 h.%采用自制硫化物助浸剂在密闭反应釜中还原浸出硫酸烧渣中的铁.分别进行了助浸剂用量、硫酸用量、始酸浓度、反应温度、搅拌速度、反应时间等条件试验,考察各因素对浸取效果的影响.结果表明:当酸浸渣25.0 g,助浸剂过剩系数1.1,硫酸过剩系数1.4,始酸浓度3.5 mol/L,反应温度95℃,搅拌速度800 r/min,反应时间3h时,铁浸取率达99.4%,助浸剂有效利用率达98.9%.

  13. Low pH (6, 5, and 4) sulfate reduction during the acidification of sucrose under thermophilic (55°C) conditions

    NARCIS (Netherlands)

    Lopes, S.I.C.; Sulistyawati, I.; Capela, M.I.; Lens, P.N.L.

    2007-01-01

    The effect of a low pH (6, 5 and 4) and different COD/SO42¿ ratios (9 and 3.5) on thermophilic (55 °C) sulfate reduction and acidification of sucrose was investigated using three upflow anaerobic sludge bed reactors fed with sucrose at an organic loading rate of 3.5 gCOD (lreactor d)¿1. The three re

  14. Investigating the Effects of Se Solid Phase Substitution in Jarosite Minerals Influenced by Bacterial Reductive Dissolution

    Directory of Open Access Journals (Sweden)

    Rachel E. Franzblau

    2014-01-01

    Full Text Available Jarosite minerals (AB3(TO42(OH6 are iron hydroxysulfate minerals that can readily incorporate trace metals into their mineral structure. A range of metals can be incorporated into the jarosite structure, including oxyanions such as selenate (SeO42−. Selenium is a micronutrient, but is toxic in relatively low doses. Selenium is present in aqueous systems in its two oxyanion forms: selenate and selenite (SeO32−. The tetrahedral sulfate coordination site can be completely substituted for selenate in jarosite minerals (NaFe3(SO4x(SeO42-x(OH6. Bacteria have been observed to reduce Se oxyanions to both more reduced forms and insoluble elemental Se. This is a pathway for selenium immobilization at contaminated sites. This experiment investigates the reductive dissolution of two Se-jarosites (solid substitution containing high and low selenium concentrations in the presence of Shewanella putrefaciens CN32. It was observed that both Fe(III and selenate were metabolically reduced and released into solution through jarosite dissolution . Selenate was also found to be incorporated intracellularly and reduced to particulate Se which was released upon cell lysis. Compared to the abiotic samples, enhanced dissolution was found with both the live and dead bacteria treatments.

  15. Paper-based chromatic toxicity bioassay by analysis of bacterial ferricyanide reduction.

    Science.gov (United States)

    Pujol-Vila, F; Vigués, N; Guerrero-Navarro, A; Jiménez, S; Gómez, D; Fernández, M; Bori, J; Vallès, B; Riva, M C; Muñoz-Berbel, X; Mas, J

    2016-03-03

    Water quality assessment requires a continuous and strict analysis of samples to guarantee compliance with established standards. Nowadays, the increasing number of pollutants and their synergistic effects lead to the development general toxicity bioassays capable to analyse water pollution as a whole. Current general toxicity methods, e.g. Microtox(®), rely on long operation protocols, the use of complex and expensive instrumentation and sample pre-treatment, which should be transported to the laboratory for analysis. These requirements delay sample analysis and hence, the response to avoid an environmental catastrophe. In an attempt to solve it, a fast (15 min) and low-cost toxicity bioassay based on the chromatic changes associated to bacterial ferricyanide reduction is here presented. E. coli cells (used as model bacteria) were stably trapped on low-cost paper matrices (cellulose-based paper discs, PDs) and remained viable for long times (1 month at -20 °C). Apart from bacterial carrier, paper matrices also acted as a fluidic element, allowing fluid management without the need of external pumps. Bioassay evaluation was performed using copper as model toxic agent. Chromatic changes associated to bacterial ferricyanide reduction were determined by three different transduction methods, i.e. (i) optical reflectometry (as reference method), (ii) image analysis and (iii) visual inspection. In all cases, bioassay results (in terms of half maximal effective concentrations, EC50) were in agreement with already reported data, confirming the good performance of the bioassay. The validation of the bioassay was performed by analysis of real samples from natural sources, which were analysed and compared with a reference method (i.e. Microtox). Obtained results showed agreement for about 70% of toxic samples and 80% of non-toxic samples, which may validate the use of this simple and quick protocol in the determination of general toxicity. The minimum instrumentation

  16. The impact of biostimulation on the fate of sulfate and associated sulfur dynamics in groundwater

    Science.gov (United States)

    Miao, Ziheng; Carreón-Diazconti, Concepcion; Carroll, Kenneth C.; Brusseau, Mark L.

    2014-08-01

    The impact of electron-donor addition on sulfur dynamics for a groundwater system with low levels of metal contaminants was evaluated with a pilot-scale biostimulation test conducted at a former uranium mining site. Geochemical and stable-isotope data collected before, during, and after the test were analyzed to evaluate the sustainability of sulfate reducing conditions induced by the test, the fate of hydrogen sulfide, and the impact on aqueous geochemical conditions. The results of site characterization activities conducted prior to the test indicated the absence of measurable bacterial sulfate reduction. The injection of an electron donor (ethanol) induced bacterial sulfate reduction, as confirmed by an exponential decrease of sulfate concentration in concert with changes in oxidation-reduction potential, redox species, alkalinity, production of hydrogen sulfide, and fractionation of δ34S-sulfate. High, stoichiometrically-equivalent hydrogen sulfide concentrations were not observed until several months after the start of the test. It is hypothesized that hydrogen sulfide produced from sulfate reduction was initially sequestered in the form of iron sulfides until the exhaustion of readily reducible iron oxides within the sediment. The fractionation of δ34S for sulfate was atypical, wherein the enrichment declined in the latter half of the experiment. It was conjectured that mixing effects associated with the release of sulfate from sulfate minerals associated with the sediments, along with possible sulfide re-oxidation contributed to this behavior. The results of this study illustrate the biogeochemical complexity that is associated with in-situ biostimulation processes involving bacterial sulfate reduction.

  17. Extraction of copper from an oxidized (lateritic) ore using bacterially catalysed reductive dissolution.

    Science.gov (United States)

    Nancucheo, Ivan; Grail, Barry M; Hilario, Felipe; du Plessis, Chris; Johnson, D Barrie

    2014-01-01

    An oxidized lateritic ore which contained 0.8 % (by weight) copper was bioleached in pH- and temperature-controlled stirred reactors under acidic reducing conditions using pure and mixed cultures of the acidophilic chemolithotrophic bacterium Acidithiobacillus ferrooxidans. Sulfur was provided as the electron donor for the bacteria, and ferric iron present in goethite (the major ferric iron mineral present in the ore) acted as electron acceptor. Significantly more copper was leached by bacterially catalysed reductive dissolution of the laterite than in aerobic cultures or in sterile anoxic reactors, with up to 78 % of the copper present in the ore being extracted. This included copper that was leached from acid-labile minerals (chiefly copper silicates) and that which was associated with ferric iron minerals in the lateritic ore. In the anaerobic bioreactors, soluble iron in the leach liquors was present as iron (II) and copper as copper (I), but both metals were rapidly oxidized (to iron (III) and copper (II)) when the reactors were aerated. The number of bacteria added to the reactors had a critical role in dictating the rate and yield of copper solubilised from the ore. This work has provided further evidence that reductive bioprocessing, a recently described approach for extracting base metals from oxidized deposits, has the potential to greatly extend the range of metal ores that can be biomined.

  18. Bacterial community structure and activity of sulfate reducing bacteria in a membrane aerated biofilm analyzed by microsensor and molecular techniques.

    Science.gov (United States)

    Liu, Hong; Tan, Shuying; Sheng, Zhiya; Liu, Yang; Yu, Tong

    2014-11-01

    The activities and vertical spatial distribution of sulfate reducing bacteria (SRB) in an oxygen (O2 )-based membrane aerated biofilm (MAB) were investigated using microsensor (O2 and H2 S) measurements and molecular techniques (polymerase chain reaction-denaturing gradient gel electrophoresis [PCR-DGGE] and fluorescence in situ hybridization [FISH]). The O2 concentration profile revealed that O2 penetrated from the bottom (substratum) of the gas permeable membrane, and was gradually consumed within the biofilm until it was completely depleted near the biofilm/bulk liquid interface, indicating oxic and anoxic zone in the MAB. The H2 S concentration profile showed that H2 S production was found in the upper 285 µm of the biofilm, indicating a high activity of SRB in this region. The results from DGGE of the PCR-amplified dissimilatory sulfite reductase subunit B (dsrB) gene and FISH showed an uneven spatial distribution of SRB. The maximum SRB biomass was located in the upper biofilm. The information from the molecular analysis can be supplemented with that from microsensor measurements to better understand the microbial community and activity of SRB in the MAB.

  19. Biotic and a-biotic Mn and Fe cycling in deep sediments across a gradient of sulfate reduction rates along the California margin

    Science.gov (United States)

    Schneider-Mor, A.; Steefel, C.; Maher, K.

    2011-12-01

    The coupling between the biological and a-biotic processes controlling trace metals in deep marine sediments are not well understood, although the fluxes of elements and trace metals across the sediment-water interface can be a major contribution to ocean water. Four marine sediment profiles (ODP leg 167 sites 1011, 1017, 1018 and 1020)were examined to evaluate and quantify the biotic and abiotic reaction networks and fluxes that occur in deep marine sediments. We compared biogeochemical processes across a gradient of sulfate reduction (SR) rates with the objective of studying the processes that control these rates and how they affect major elements as well as trace metal redistribution. The rates of sulfate reduction, methanogenesis and anaerobic methane oxidation (AMO) were constrained using a multicomponent reactive transport model (CrunchFlow). Constraints for the model include: sediment and pore water concentrations, as well as %CaCO3, %biogenic silica, wt% carbon and δ13C of total organic carbon (TOC), particulate organic matter (POC) and mineral associated carbon (MAC). The sites are distinguished by the depth of AMO: a shallow zone is observed at sites 1018 (9 to 19 meters composite depth (mcd)) and 1017 (19 to 30 mcd), while deeper zones occur at sites 1011 (56 to 76 mcd) and 1020 (101 to 116 mcd). Sulfate reduction rates at the shallow AMO sites are on the order 1x10-16 mol/L/yr, much faster than rates in the deeper zone sulfate reduction (1-3x10-17 mol/L/yr), as expected. The dissolved metal ion concentrations varied between the sites, with Fe (0.01-7 μM) and Mn (0.01-57 μM) concentrations highest at Site 1020 and lowest at site 1017. The highest Fe and Mn concentrations occurred at various depths, and were not directly correlated with the rates of sulfate reduction and the maximum alkalinity values. The main processes that control cycling of Fe are the production of sulfide from sulfate reduction and the distribution of Fe-oxides. The Mn distribution

  20. New evidence for TiO2 uniform surfaces leading to complete bacterial reduction in the dark: critical issues.

    Science.gov (United States)

    Nesic, Jelena; Rtimi, Sami; Laub, Danièle; Roglic, Goran M; Pulgarin, Cesar; Kiwi, John

    2014-11-01

    This study presents new evidence for the events leading to Escherichia coli reduction in the absence of light irradiation on TiO2-polyester (from now on TiO2-PES. By transmission electron microscopy (TEM) the diffusion of TiO2 NP's aggregates with the E. coli outer lipo-polyssacharide (LPS) layer is shown to be a prerequisite for the loss of bacterial cultivability. Within 30 min in the dark the TiO2 aggregates interact with E. coli cell wall leading within 120 min to the complete loss of bacterial cultivability on a TiO2-PES 5% TiO2 sample. The bacterial reduction was observed to increase with a higher TiO2 loading on the PES up to 5%. Bacterial disinfection on TiO2-PES in the dark was slower compared to the runs under low intensity simulated sunlight light irradiation. The interaction between the TiO2 aggregates and the E. coli cell wall is discussed in terms of the competition between the TiO2 units collapsing to form TiO2-aggregates at a physiologic pH-value followed by the electrostatic interaction with the bacteria surface. TiO2-PES samples were able to carry repetitive bacterial inactivation. This presents a potential for practical applications. X-ray photoelectron spectroscopy (XPS) evidence was found for the reduction of Ti4+ to Ti3+ contributing to redox interactions between TiO2-PES and the bacterial cell wall. Insight is provided into the mechanism of interaction between the E. coli cell wall and TiO2 NP's. The properties of the TiO2-PES surface like percentage atomic concentration, TiO2-loading, optical absorption, surface charge and crystallographic phases are reported in this study.

  1. Reduction of nitrate and uranium by indigenous bacteria; Reduction des nitrates et de l'uranium par les bacteries indigenes

    Energy Technology Data Exchange (ETDEWEB)

    Abdelouas, A. [Center for Research in Superconductivity and Superconductivity Electronics (United States); Lutze, W.; Nuttall, E. [University of New Mexico, Albuquerque NM (United States). Dept. of Chemical and Nuclear Engineering

    1998-07-01

    A bio-remediation concept has been developed to clean up ground water contaminated with nitrate (1200 mg.L{sup -1}) and uranium (0.25 mg.L{sup -1}). We studied the Tuba City mill tailings site, Arizona, USA. Indigenous bacteria capable of catalyzing the reduction of NO{sub 3}{sup -} and U(VI) were identified in the ground water and in the host rock, the Navajo sandstone. After complete reduction of O{sub 2} and NO{sub 3}{sup -} within one week, U(VI) was reduced and precipitated as uraninite. Final uranium concentrations < 15{mu}g.L{sup -1} were reached after a few weeks at 24 deg C. Iron sulfide also precipitated as a result of reduction of Fe(III) on the sand surface and sulfate in the ground water. U(VI) was not reduced by sulfide. It was found that enzymatic reduction of U(VI) is faster than abiotic reduction under the conditions given by the composition of the ground water. (authors)

  2. Simulation of the inhibition of microbial sulfate reduction in a two-compartment upflow bioreactor subjected to molybdate injection.

    Science.gov (United States)

    de Jesus, E B; de Andrade Lima, L R P

    2016-08-01

    Souring of oil fields during secondary oil recovery by water injection occurs mainly due to the action of sulfate-reducing bacteria (SRB) adhered to the rock surface in the vicinity of injection wells. Upflow packed-bed bioreactors have been used in petroleum microbiology because of its similarity to the oil field near the injection wells or production. However, these reactors do not realistically describe the regions near the injection wells, which are characterized by the presence of a saturated zone and a void region close to the well. In this study, the hydrodynamics of the two-compartment packing-free/packed-bed pilot bioreactor that mimics an oil reservoir was studied. The packed-free compartment was modeled using a continuous stirred tank model with mass exchange between active and stagnant zones, whereas the packed-bed compartment was modeled using a piston-dispersion-exchange model. The proposed model adequately represents the hydrodynamic of the packed-free/packed-bed bioreactor while the simulations provide important information about the characteristics of the residence time distribution (RTD) curves for different sets of model parameters. Simulations were performed to represent the control of the sulfate-reducing bacteria activity in the bioreactor with the use of molybdate in different scenarios. The simulations show that increased amounts of molybdate cause an effective inhibition of the souring sulfate-reducing bacteria activity.

  3. Occurrence of benthic microbial nitrogen fixation coupled to sulfate reduction in the seasonally hypoxic Eckernförde Bay, Baltic Sea

    Directory of Open Access Journals (Sweden)

    V. J. Bertics

    2013-03-01

    Full Text Available Despite the worldwide occurrence of marine hypoxic regions, benthic nitrogen (N cycling within these areas is poorly understood and it is generally assumed that these areas represent zones of intense fixed N loss from the marine system. Sulfate reduction can be an important process for organic matter degradation in sediments beneath hypoxic waters and many sulfate-reducing bacteria (SRB have the genetic potential to fix molecular N (N2. Therefore, SRB may supply fixed N to these systems, countering some of the N lost via microbial processes, such as denitrification and anaerobic ammonium oxidation. The objective of this study was to evaluate if N2 fixation, possibly by SRB, plays a role in N cycling within the seasonally hypoxic sediments from the Eckernförde Bay, Baltic Sea. Monthly samplings were performed over the course of one year to measure nitrogenase activity (NA and sulfate reduction rates, to determine the seasonal variations in bioturbation (bioirrigation activity and important benthic geochemical profiles, such as sulfur and N compounds, and to monitor changes in water column temperature and oxygen concentrations. Additionally, at several time points, the active N-fixing community was examined via molecular tools. Integrated rates of N2 fixation (approximated from NA and sulfate reduction showed a similar seasonality pattern, with highest rates occurring in August (approx. 22 and 880 nmol cm−3 d−1 of N and SO42−, respectively and October (approx. 22 and 1300 nmol cm−3 d−1 of N and SO42− respectively, and lowest rates occurring in February (approx. 8 and 32 nmol cm−3 d−1 of N and SO42−, respectively. These rate changes were positively correlated with bottom water temperatures and previous reported plankton bloom activities, and negatively correlated with bottom water oxygen concentrations. Other variables that also appeared to play a role in rate determination were bioturbation, bubble irrigation and winter storm

  4. Effects of Lead and Mercury on Sulfate-Reducing Bacterial Activity in a Biological Process for Flue Gas Desulfurization Wastewater Treatment

    Science.gov (United States)

    Zhang, Liang; Lin, Xiaojuan; Wang, Jinting; Jiang, Feng; Wei, Li; Chen, Guanghao; Hao, Xiaodi

    2016-07-01

    Biological sulfate-reducing bacteria (SRB) may be effective in removing toxic lead and mercury ions (Pb(II) and Hg(II)) from wet flue gas desulfurization (FGD) wastewater through anaerobic sulfite reduction. To confirm this hypothesis, a sulfite-reducing up-flow anaerobic sludge blanket reactor was set up to treat FGD wastewater at metal loading rates of 9.2 g/m3-d Pb(II) and 2.6 g/m3-d Hg(II) for 50 days. The reactor removed 72.5 ± 7% of sulfite and greater than 99.5% of both Hg(II) and Pb(II). Most of the removed lead and mercury were deposited in the sludge as HgS and PbS. The contribution of cell adsorption and organic binding to Pb(II) and Hg(II) removal was 20.0 ± 0.1% and 1.8 ± 1.0%, respectively. The different bioavailable concentration levels of lead and mercury resulted in different levels of lethal toxicity. Cell viability analysis revealed that Hg(II) was less toxic than Pb(II) to the sludge microorganisms. In the batch tests, increasing the Hg(II) feeding concentration increased sulfite reduction rates. In conclusion, a sulfite-reducing reactor can efficiently remove sulfite, Pb(II) and Hg(II) from FGD wastewater.

  5. Using a Statistical Model to Examine the Effect of COD: SO42− Ratio, HRT and LA Concentration on Sulfate Reduction in an Anaerobic Sequencing Batch Reactor

    Directory of Open Access Journals (Sweden)

    Rajesh Singh

    2014-11-01

    Full Text Available Taguchi statistical design, an orthogonal array (OA method, was used to study the impact of the COD/SO42− ratio, hydraulic retention time (HRT and linoleic acid (LA concentration on sulfate (SO42− reduction in an anaerobic sequencing batch reactor using glucose as the electron donor. Based on the OA, optimum condition for maximum SO42− reduction was evaluated. Increasing the COD/SO42− ratio and HRT caused decreasing SO42− reduction while increased SO42− reduction was observed with increasing LA concentration (1 g L−1. In control (not fed LA cultures, higher SO42− reduction (87% ± 3% was observed at a low COD/SO42− ratio of 0.8. This indicates that increasing SO42− reduction was observed at increasing SO42− loading rates. In general, results from this study reveal that limiting the substrate concentration with high SO42− levels (low COD/SO42− ratio favors high SO42− removal. Surface plots were used to evaluate the significant interactions between the experimental factors. Accuracy of the model was verified using an analysis of residuals. Optimum conditions for maximum SO42− reduction (97.61% were observed at a COD/SO42− ratio of 0.8 (level 1, 12 h HRT (level 1 together with 1000 mg L−1 LA addition (level 3. In general, the Taguchi OA provided a useful approach for predicting the percent SO42− reduction in inhibited mixed anaerobic cultures within the factor levels investigated.

  6. Bacterial reduction and release of adsorbed arsenate on Fe(Ⅲ)-, Al-and coprecipitated Fe(Ⅲ)/Al-hydroxides

    Institute of Scientific and Technical Information of China (English)

    Xuexia Zhang; Yongfeng Jia; Shaofeng Wang; Rongrong Pan; Xudong Zhang

    2012-01-01

    Mobilization of arsenic under anaerobic conditions is of great concern in arsenic contaminated soils and sediments.Bacterial reduction of As(Ⅴ)and Fe(Ⅲ)influences the cycling and partitioning of arsenic between solid and aqueous phase.We investigated the impact of bacterially mediated reductions of Fe(Ⅲ)/A1 hydroxides-bound arsenic(Ⅴ)and iron(Ⅲ)oxides on arsenic release.Our results suggested that As(Ⅴ)reduction occurred prior to Fe(Ⅲ)reduction,and Fe(Ⅲ)reduction did not enhance the release of arsenic.Instead,Fe(Ⅲ)hydroxides retained their dissolved concentrations during the experimental process,even though the new iron mineral-magnetite formed.In contrast,the release of reduced As(Ⅲ)was promoted greatly when aluminum hydroxides was incorporated.Thus,the substitution of aluminum hydroxides may be responsible for the release of arsenic in the contaminated soils and sediments,since aluminum substitution of Fe(Ⅲ)hydroxides universally occurs under natural conditions.

  7. Improved Understanding of Microbial Iron and Sulfate Reduction Through a Combination of Bottom-up and Top-down Functional Proteomics Assays

    Energy Technology Data Exchange (ETDEWEB)

    Richardson, Ruth [Cornell Univ., Ithaca, NY (United States)

    2016-02-28

    Our overall goal was to improve the understanding of microbial iron and sulfate reduction by evaluating a diverse iron and sulfate reducing organisms utilizing a multi-omics approach combining “top-down” and “bottom-up” omics methodologies. We initiated one of the first combined comparative genomics, shotgun proteomics, RTqPCR, and heterologous expression studies in pursuit of our project objectives. Within the first year of this project, we created a new bioinformatics tool for ortholog identification (“SPOCS”). SPOCS is described in our publication, Curtis et al., 2013. Using this tool we were able to identify conserved orthologous groups across diverse iron and sulfate reducing microorganisms from Firmicutes, gamma-proteobacteria and delta-proteobacteria. For six iron and sulfate reducers we also performed shotgun proteomics (“bottom-up” proteomics including accurate mass and time (AMT) tag and iTRAQ approaches). Cultures include Gram (-) and Gram (+) microbes. Gram (-) were: Geobacter sulfureducens (grown on iron citrate and fumarate), Geobacter bemidjiensis (grown on iron citrate and fumarate), Shewanella oneidiensis (grown on iron citrate and fumarate) and Anaeromyxobacter dehalogenans (grown on iron citrate and fumarate). Although all cultures grew on insoluble iron, the iron precipitates interfered with protein extraction and analysis; which remains a major challenge for researchers in disparate study systems. Among the Gram (-) organisms studied, Anaeromyxobacter dehalogenans remains the most poorly characterized. Yet, it is arguably the most versatile organisms we studied. In this work we have used comparative proteomics to hypothesize which two of the dozens of predicted c-type cytochromes within Anaeromyxobacter dehalogenans may be directly involved in soluble iron reduction. Unfortunately, heterologous expression of these Anaeromyxobacter dehalogenans ctype cytochromes led to poor protein production and/or formation of inclusion bodies

  8. p-Cresyl sulfate and indoxyl sulfate in pediatric patients on chronic dialysis

    Directory of Open Access Journals (Sweden)

    Hye Sun Hyun

    2013-04-01

    Full Text Available &lt;b&gt;Purpose:&lt;/b&gt; Indoxyl sulfate and p- cresyl sulfate are important protein-bound uremic retention solutes whose levels can be partially reduced by renal replacement therapy. These solutes originate from intestinal bacterial protein fermentation and are associated with cardiovascular outcomes and chronic kidney disease progression. The aims of this study were to investigate the levels of indoxyl sulfate and p- cresyl sulfate as well as the effect of probiotics on reducing the levels of uremic toxins in pediatric patients on dialysis. &lt;b&gt;Methods:&lt;/b&gt; We enrolled 20 pediatric patients undergoing chronic dialysis; 16 patients completed the study. The patients underwent a 12-week regimen of VSL#3, a high-concentration probiotic preparation, and the serum levels of indoxyl sulfate and p- cresyl sulfate were measured before treatment and at 4, 8, and 12 weeks after the regimen by using fluorescence liquid chromatography. To assess the normal range of indoxyl sulfate and p- cresyl sulfate we enrolled the 16 children with normal glomerular filtration rate who had visited an outpatient clinic for asymptomatic microscopic hematuria that had been detected by a school screening in August 2011. &lt;b&gt;Results:&lt;/b&gt; The baseline serum levels of indoxyl sulfate and p- cresyl sulfate in the patients on chronic dialysis were significantly higher than those in the children with microscopic hematuria. The baseline serum levels of p- cresyl sulfate in the peritoneal dialysis group were significantly higher than those in the hemodialysis group. There were no significant changes in the levels of these uremic solutes after 12-week VSL#3 treatment in the patients on chronic dialysis. &lt;b&gt;Conclusion:&lt;/b&gt; The levels of the uremic toxins p- cresyl sulfate and indoxyl sulfate are highly elevated in pediatric patients on dialysis, but there was no significant effect by

  9. Health Effects of Alkaline Diet and Water, Reduction of Digestive-tract Bacterial Load, and Earthing.

    Science.gov (United States)

    Mousa, Haider Abdul-Lateef

    2016-04-01

    In the article, the author discusses the issue of chronic, low-grade acidosis that is thought to be brought about primarily by 2 factors: (1) advancing age, with a consequent decline in renal function; and (2) diet. An acid-forming diet can induce low-grade metabolic acidosis, which causes very small decreases in blood pH and plasma bicarbonate (HCO3-) that remain within the range considered to be normal. However, if the duration of the acidosis is prolonged or chronically present, even a low degree of acidosis can become significant. This article reviews supporting evidence in the literature that has shown that consumption of abundant alkaline-forming foods can result in improvement in bone mineral density (BMD) and muscle mass, protection from chronic illnesses, reduced tumor-cell invasion and metastasis, and effective excretion of toxins from the body. In addition, a large number of studies showing the benefits of alkaline water (mineral water) have revealed that people consuming water with a high level of total dissolved solids (TDS) (ie, with a high mineral content) have shown a lower incidence of coronary heart disease (CHD), cardiovascular disease (CVD), and cancer and lower total mortality rates. Consumption of alkaline water also may prevent osteoporosis and protect pancreatic beta cells with its antioxidant effects. In addition, this article discusses the literature that shows that reducing digestive-tract bacterial load can play an important role in increasing blood alkalinity toward the normal upper limit. That change occurs through good oral hygiene, flossing of teeth, perfect chewing of food, and bowel evacuation as soon as possible. Finally, the author reviews the literature that shows that earthing (ie, the direct contact of the human body with the earth) can supply a current of plentiful electrons. Earthing has been shown to reduce acute and chronic inflammation, blood glucose in patients with diabetes, red blood cell (RBC) aggregation, and blood

  10. Incorporation of aqueous reaction kinetics and biodegradation intoTOUGHREACT: Application of a multi-region model to hydrobiogeoChemicaltransport of denitrification and sulfate reduction

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Tianfu

    2006-07-13

    The need to consider aqueous and sorption kinetics andmicrobiological processes arises in many subsurface problems. Ageneral-rate expression has been implemented into the TOUGHREACTsimulator, which considers multiple mechanisms (pathways) and includesmultiple product, Monod, and inhibition terms. This paper presents aformulation for incorporating kinetic rates among primary species intomass-balance equations. The space discretization used is based on aflexible integral finite difference approach that uses irregular griddingto model bio-geologic structures. A general multi-region model forhydrological transport interacted with microbiological and geochemicalprocesses is proposed. A 1-D reactive transport problem with kineticbiodegradation and sorption was used to test the enhanced simulator,which involves the processes that occur when a pulse of water containingNTA (nitrylotriacetate) and cobalt is injected into a column. The currentsimulation results agree very well with those obtained with othersimulators. The applicability of this general multi-region model wasvalidated by results from a published column experiment ofdenitrification and sulfate reduction. The matches with measured nitrateand sulfate concentrations were adjusted with the interficial areabetween mobile hydrological and immobile biological regions. Resultssuggest that TOUGHREACT can not only be a useful interpretative tool forbiogeochemical experiments, but also can produce insight into processesand parameters of microscopic diffusion and their interplay withbiogeochemical reactions. The geometric- and process-based multi-regionmodel may provide a framework for understanding field-scalehydrobiogeochemical heterogeneities and upscaling parameters.

  11. Structural and functional studies of multiheme cytochromes C involved in extracellular electron transport in bacterial dissimilatory metal reduction.

    Science.gov (United States)

    Tikhonova, T V; Popov, V O

    2014-12-01

    Bacteria utilizing insoluble mineral forms of metal oxides as electron acceptors in respiratory processes are widespread in the nature. The electron transfer from a pool of reduced quinones in the cytoplasmic membrane across the periplasm to the bacterial outer membrane and then to an extracellular acceptor is a key step in bacterial dissimilatory metal reduction. Multiheme cytochromes c play a crucial role in the extracellular electron transfer. The bacterium Shewanella oneidensis MR-1 was used as a model organism to study the mechanism of extracellular electron transport. In this review, we discuss recent data on the composition, structures, and functions of multiheme cytochromes c and their functional complexes responsible for extracellular electron transport in Shewanella oneidensis.

  12. Bacterial diversity and reductive dehalogenase redundancy in a 1,2-dichloroethane-degrading bacterial consortium enriched from a contaminated aquifer

    Directory of Open Access Journals (Sweden)

    Wittebolle Lieven

    2010-02-01

    Full Text Available Abstract Background Bacteria possess a reservoir of metabolic functionalities ready to be exploited for multiple purposes. The use of microorganisms to clean up xenobiotics from polluted ecosystems (e.g. soil and water represents an eco-sustainable and powerful alternative to traditional remediation processes. Recent developments in molecular-biology-based techniques have led to rapid and accurate strategies for monitoring and identification of bacteria and catabolic genes involved in the degradation of xenobiotics, key processes to follow up the activities in situ. Results We report the characterization of the response of an enriched bacterial community of a 1,2-dichloroethane (1,2-DCA contaminated aquifer to the spiking with 5 mM lactate as electron donor in microcosm studies. After 15 days of incubation, the microbial community structure was analyzed. The bacterial 16S rRNA gene clone library showed that the most represented phylogenetic group within the consortium was affiliated with the phylum Firmicutes. Among them, known degraders of chlorinated compounds were identified. A reductive dehalogenase genes clone library showed that the community held four phylogenetically-distinct catalytic enzymes, all conserving signature residues previously shown to be linked to 1,2-DCA dehalogenation. Conclusions The overall data indicate that the enriched bacterial consortium shares the metabolic functionality between different members of the microbial community and is characterized by a high functional redundancy. These are fundamental features for the maintenance of the community's functionality, especially under stress conditions and suggest the feasibility of a bioremediation treatment with a potential prompt dehalogenation and a process stability over time.

  13. Cathodic bacterial community structure applying the different co-substrates for reductive decolorization of Alizarin Yellow R.

    Science.gov (United States)

    Sun, Qian; Li, Zhi-Ling; Wang, You-Zhao; Yang, Chun-Xue; Chung, Jong Shik; Wang, Ai-Jie

    2016-05-01

    Selective enrichment of cathodic bacterial community was investigated during reductive decolorization of AYR fedding with glucose or acetate as co-substrates in biocathode. A clear distinction of phylotype structures were observed between glucose-fed and acetate-fed biocathodes. In glucose-fed biocathode, Citrobacter (29.2%), Enterococcus (14.7%) and Alkaliflexus (9.2%) were predominant, and while, in acetate-fed biocathode, Acinetobacter (17.8%) and Achromobacter (6.4%) were dominant. Some electroactive or reductive decolorization genera, like Pseudomonas, Delftia and Dechloromonas were commonly enriched. Both of the higher AYR decolorization rate (k(AYR)=0.46) and p-phenylenediamine (PPD) generation rate (k(PPD)=0.38) were obtained fed with glucose than acetate (k(AYR)=0.18; k(PPD)=0.16). The electrochemical behavior analysis represented a total resistance in glucose-fed condition was about 73.2% lower than acetate-fed condition. The different co-substrate types, resulted in alteration of structure, richness and composition of bacterial communities, which significantly impacted the performances and electrochemical behaviors during reductive decolorization of azo dyes in biocathode.

  14. Temperature dependence of microbial degradation of organic matter in marine sediments: polysaccharide hydrolysis, oxygen consumption, and sulfate reduction

    DEFF Research Database (Denmark)

    Arnosti, C.; Jørgensen, BB; Sagemann, J.;

    1998-01-01

    remineralization were monitored through consumption of oxygen and reduction of (SO42-)-S-35. At each of the 4 sites, the temperature response of the initial step of organic carbon remineralization was similar to that of the terminal steps. Although optimum temperatures were always well above ambient environmental...

  15. Occurrence of benthic microbial nitrogen fixation coupled to sulfate reduction in the seasonally hypoxic Eckernförde Bay, Baltic Sea

    Directory of Open Access Journals (Sweden)

    V. J. Bertics

    2012-06-01

    Full Text Available Despite the worldwide occurrence of marine hypoxic regions, benthic nitrogen (N cycling within these areas is poorly understood and it is generally assumed that these areas represent zones of intense fixed N loss from the marine system. Sulfate reduction can be an important process for organic matter degradation in sediments beneath hypoxic waters and many sulfate-reducing bacteria (SRB have the genetic potential to fix molecular N (N2. Therefore, SRB may supply fixed N to these systems, countering some of the N lost via microbial processes such as denitrification and anaerobic ammonium oxidation. The objective of this study was to evaluate if N2-fixation, possibly by SRB, plays a role in N cycling within the seasonally hypoxic sediments from Eckernförde Bay, Baltic Sea. Monthly samplings were performed over the course of one year to measure N2-fixation and sulfate reduction rates, to determine the seasonal variations in bioturbation (bioirrigation activity and important benthic geochemical profiles, such as sulfur and N compounds, and to monitor changes in water column temperature and oxygen concentrations. Additionally, at several time points, rates of benthic denitrification were also measured and the active N-fixing community was examined via molecular tools. Integrated rates of N2-fixation and sulfate reduction showed a similar seasonality pattern, with highest rates occurring in August (approx. 22 and 880 nmol cm−3 d−1 of N and SO42−, respectively and October (approx. 22 and 1300 nmol cm−3 d−1 of N and SO42−, respectively, and lowest rates occurring in February (approx. 8 and 32 nmol cm−3 d−1 of N and SO42−, respectively. These rate changes were positively correlated with bottom water temperatures and previous reported plankton bloom activities

  16. Kinetic analysis of microbial sulfate reduction by desulfovibrio desulfuricans in an anaerobic upflow porous media biofilm reactor.

    Science.gov (United States)

    Chen, C I; Mueller, R F; Griebe, T

    1994-02-20

    An anaerobic upflow porous media biofilm reactor was designed to study the kinetics and stoichiometry of hydrogen sulfide production by the sulfate-reducing bacterium (SRB) Desulfovibrio desulfuricans (ATCC 5575) as the first step for the modeling and control of formation souring (H(2)S) in oil field porous media. The reactor was a packed bed (50 x 5.5 cm) tubular reactor. Sea sand (140 to 375 mum) was used as the porous media. The initial indication of souring was the appearance of well-separated black spots (precipitates of iron sulfide) in the sand bed. The blackened zones expanded radially and upward through the column. New spots also appeared and expanded into the cone shapes. Lactate (substrate) was depleted and hydrogen sulfide appeared in the effluent.Analysis of the pseudo-steady state column shows that there were concentration gradients for lactate and hydrogen sulfide along the column. The results indicate that most of the lactate was consumed at the front part of the column. Measurements of SRB biomass on the solid phase (sand) and in the liquid phase indicate that the maximum concentration of SRB biomass resided at the front part of the column while the maximum in the liquid phase occurred further downstream. The stoichiometry regarding lactate consumption and hydrogen sulfide production observed in the porous media reactor was different from that in a chemostat. After analyzing the radial dispersion coefficient for the SRB in porous media and kinetics of microbial growth, it was deduced that transport phenomena dominate the souring process in our porous media reactor system. (c) 1994 John Wiley & Sons, Inc.

  17. Reductive dechlorination of methoxychlor by bacterial species of environmental origin: evidence for primary biodegradation of methoxychlor in submerged environments.

    Science.gov (United States)

    Satsuma, Koji; Masuda, Minoru

    2012-02-29

    Methoxychlor [1,1,1-trichloro-2,2-bis(4-methoxyphenyl)ethane] is an organochlorine insecticide that undergoes dechlorination in natural submerged environments. We investigated the ability to dechlorinate this compound in seven environmental bacterial species ( Aeromonas hydrophila , Enterobacter amnigenus , Klebsiella terrigena , Bacillus subtilis , Achromobacter xylosoxidans , Acinetobacter calcoaceticus , and Mycobacterium obuense ) and the enteric bacterium Escherichia coli as a positive control. In R2A broth at 25 °C under aerobic, static culture, all species except Ach. xylosoxidans were observed to convert methoxychlor to dechlorinated methoxychlor [1,1-dichloro-2,2-bis(4-methoxyphenyl)ethane]. The medium was aerobic at first, but bacterial growth resulted in the consumption of oxygen and generated microaerobic and weakly reductive conditions. Replacement of the headspace of the culture tubes with nitrogen gas was found to decrease the dechlorination rate. Our findings suggest that extensive bacterial species ubiquitously inhabiting the subsurface water environment play an important role in the primary dechlorination of methoxychlor.

  18. Effects of thermal maturation and thermochemical sulfate reduction on compound-specific sulfur isotopic compositions of organosulfur compounds in Phosphoria oils from the Bighorn Basin, USA

    Science.gov (United States)

    Ellis, Geoffrey S.; Said-Ahamed, Ward; Lillis, Paul G.; Shawar, Lubna; Amrani, Alon

    2017-01-01

    Compound-specific sulfur isotope analysis was applied to a suite of 18 crude oils generated from the Permian Phosphoria Formation in the Bighorn Basin, western USA. These oils were generated at various levels of thermal maturity and some experienced thermochemical sulfate reduction (TSR). This is the first study to examine the effects of thermal maturation on stable sulfur isotopic compositions of individual organosulfur compounds (OSCs) in crude oil. A general trend of 34S enrichment in all of the studied compounds with increasing thermal maturity was observed, with the δ34S values of alkyl-benzothiophenes (BTs) tending to be enriched in 34S relative to those of the alkyl-dibenzothiophenes (DBTs) in lower-maturity oils. As thermal maturity increases, δ34S values of both BTs and DBTs become progressively heavier, but the difference in the average δ34S value of the BTs and DBTs (Δ34S BT-DBT) decreases. Differences in the isotopic response to thermal stress exhibited by these two compound classes are considered to be the result of relative differences in their thermal stabilities. TSR-altered Bighorn Basin oils have OSCs that are generally enriched in 34S relative to non-TSR-altered oils, with the BTs being enriched in 34S relative to the DBTs, similar to the findings of previous studies. However, several oils that were previously interpreted to have been exposed to minor TSR have Δ34S BT-DBT values that do not support this interpretation. The δ34S values of the BTs and DBTs in some of these oils suggest that they did not experience TSR, but were derived from a more thermally mature source. The heaviest δ34S values observed in the OSCs are enriched in 34S by up to 10‰ relative to that of Permian anhydrite in the Bighorn Basin, suggesting that there may be an alternate or additional source of sulfate in some parts of the basin. These results indicate that the sulfur isotopic composition of OSCs in oil provides a sensitive indicator for the extent of TSR

  19. Effects of ORP, recycling rate, and HRT on simultaneous sulfate reduction and sulfur production in expanded granular sludge bed (EGSB) reactors under micro-aerobic conditions for treating molasses distillery wastewater.

    Science.gov (United States)

    Qinglin, Xie; Yanhong, Li; Shaoyuan, Bai; Hongda, Ji

    2012-01-01

    An expanded granular sludge bed (EGSB) reactor was adopted to incubate the sludge biogranule that could simultaneously achieve sulfate reduction and sulfide reoxidization to elemental sulfur for treating molasses distillery wastewater. The EGSB reactor was operated for 175 days at 35 °C with a pH value of 7.0, chemical oxygen demand (COD) loading rate of 4.8 kg COD/(m³ d), and sulfate loading rate of 0.384 kg SO(4)(2-)/(m³ d). The optimal operation parameters, including the oxidation reduction potential (ORP), recycling rate, and hydraulic retention time (HRT), were established to obtain stable and acceptable removal efficiencies of COD, sulfate, and higher elemental sulfur production. With an ORP of -440 mV, a recycling rate of 300%, and HRT of 15 h, the COD and sulfate removal efficiencies were 73.4 and 61.3%, respectively. The elemental sulfur production ratio reached 30.1% when the elemental sulfur concentration in the effluent was 48.1 mg/L. The performance results were also confirmed by the mass balance calculation of sulfate, sulfide, and elemental sulfur over the EGSB reactor.

  20. Biomass reduction of Salvinia molesta exposed to copper sulfate pentahydrate (CuSO4.5H2O

    Directory of Open Access Journals (Sweden)

    João Pedro Alves de Azevedo Barros

    2015-07-01

    Full Text Available Copper in the aquatic ecosystem may remain adsorbed or be incorporated into the biomass and undergo biomagnification causing unwanted effects to aquatic macrophyte communities. This study evaluated the biomass reduction of Salvinia molesta (Mitchell exposed to copper sulphate pentahydrate (CuSO4.5H2O under laboratory conditions. Approximately 20.5 g of fresh mass (FM of S. molesta (0.74 g dry matter, DM were placed in glass tanks with different concentrations (n = 3 of CuSO4.5H2O as follows: 0.0; 2.0; 4.0; 6.0; and 8.0 mg L-1 for 28 days. The dry mass was determined after each seven-day interval over 28 days and submitted to repeated ANOVA measures, followed by a Tukey test (P<0,05. The results show that macrophyte increased until the seventh day of exposure in all treatments. After this period, the biomass of S. molesta decreased; but there was no significant difference between treatments with copper, except for the 8.0 mg L-1 treatment. The copper treatments decreased the S. molesta biomass an average of 43.2% (0.50 g DM after 28 days. At the end of the experiment, copper absorption in the treatments with 6.0 and 8.0 mg L-1 was on average 77.9% higher than in the treatments with 2 and 4 mg L-1 . The treatments with 6.0 and 8.0 mg L-1 reached their maximum bioaccumulation capacity after 14 days. The results show that contamination of the aquatic environment at concentrations above 2 mg L-1 Cu2+ can reduce the S. molesta biomass by approximately 43%.

  1. Sources of conductance changes during bacterial reduction of trimethylamine oxide to trimethylammonium in phosphate buffer.

    Science.gov (United States)

    Owens, J D; Miskin, D R; Wacher-Viveros, M C; Benge, L C

    1985-06-01

    The sources of conductance changes during reduction of trimethylamine oxide to trimethylamine by Escherichia coli with formate as electron donor and in the presence of phosphate buffer were investigated. Theoretical considerations and experimental results suggest that the major source of conductance change is the conversion of dihydrogen phosphate to hydrogen phosphate. This transformation contributes almost twice as much to the total conductance change as does the conversion of uncharged trimethylamine oxide to charged trimethylammonium.

  2. Over-expression of the bacterial phytase US417 in Arabidopsis reduces the concentration of phytic acid and reveals its involvement in the regulation of sulfate and phosphate homeostasis and signaling.

    Science.gov (United States)

    Belgaroui, Nibras; Zaidi, Ikram; Farhat, Ameny; Chouayekh, Hichem; Bouain, Nadia; Chay, Sandrine; Curie, Catherine; Mari, Stéphane; Masmoudi, Khaled; Davidian, Jean-Claude; Berthomieu, Pierre; Rouached, Hatem; Hanin, Moez

    2014-11-01

    Phytic acid (PA) is the main phosphorus storage form in plant seeds. It is recognized as an anti-nutrient for humans and non-ruminant animals, as well as one of the major sources of phosphorus that contributes to eutrophication. Therefore, engineering plants with low PA content without affecting plant growth capacity has become a major focus in plant breeding. Nevertheless, lack of knowledge on the role of PA seed reserves in regulating plant growth and in maintaining ion homeostasis hinders such an agronomical application. In this context, we report here that the over-expression of the bacterial phytase PHY-US417 in Arabidopsis leads to a significant decrease in seed PA, without any effect on the seed germination potential. Interestingly, this over-expression also induced a higher remobilization of free iron during germination. Moreover, the PHY-over-expressor lines show an increase in inorganic phosphate and sulfate contents, and a higher biomass production after phosphate starvation. Finally, phosphate sensing was altered because of the changes in the expression of genes induced by phosphate starvation or involved in phosphate or sulfate transport. Together, these results show that the over-expression of PHY-US417 reduces PA concentration, and provide the first evidence for the involvement of PA in the regulation of sulfate and phosphate homeostasis and signaling.

  3. 废铁屑还原软锰矿制备高纯硫酸锰工艺研究%Preparation of High Purity Manganese Sulfate from the Reduction of Pyrolusite Using Scrap Iron as the Reductant

    Institute of Scientific and Technical Information of China (English)

    蔡振勇; 易清风; 刘汉勇; 方明略; 龚学华; 符国庆

    2011-01-01

    研究了采用废铁屑作为还原剂,在稀硫酸介质中湿法还原软锰矿制备硫酸锰的工艺过程.通过单因素实验确定最佳工艺参数,结果表明:当Fe/MnO2的摩尔比为0.78∶1,H2SO4/MnO2的摩尔比为2.1∶1,反应温度50℃,反应时间80 min时,锰的浸出率在95%以上.加入碳酸钙中和调节溶液pH值至5~6,使溶液中的铁、铝等杂质离子水解为氢氧化铁、氢氧化铝等沉淀除去,加入硫化钡使浸出溶液中的重金属离子以硫化物沉淀除去,减压过滤得到硫酸锰粗滤液,向粗滤液中加入二氟化锰使溶液中的Ca2+、Mg2+等离子生成氟化物沉淀,然后溶液经过静置过滤得到硫酸锰净化液,滤液经浓缩、结晶制备硫酸锰产品.经检测产品纯度在99%以上,杂质含量低于国家标准.%In this paper, the leaching of manganese sulfate from pyrolusite with scrap iron as a reductant in dilute sulfuric acid solution was studied. Optimal parameters that affect the leaching efficiency of manganese sulfate were determined by the single factor method. The results shows that the leaching rate of manganese can reach more than 95%under the condition of Fe to MnO2 molar ratio of 0.78, H2SO4 to MnO2 molar ratio of 2.1, reaction temperature 50°C, reaction time 80min. Calcium carbonate was added to the leaching solution to adjust pH 5 ~ 6 so that iron^aluminum and other impurities were removed by becoming iron hydroxide、aluminum hydroxide and other precipitations. Heavy metal ions were removed by adding barium sulfide to the leaching solution to form sulfide precipitations. After being filtrated, manganese difluoride was added to the filtrate to precipitate Ca2+ 、Mg2+ and other impurities. After standing, the solution was then filtrated and high purity manganese sulfate solution was obtained. Crystallized manganese sulfate was obtained after being concentrated. Manganese sulfate purity can reach more than 99% and impurity contents were lower than those

  4. Microbiology and biogeochemistry of sediments and rhizosphere of mangroves: bacterial production, sulphate-reduction and methylation of mercury with methodological focus on incubation-extraction of {sup 14}C-leucine; Microbiologia e biogeoquimica de sedimentos e rizosfera de manguezais: producao bacteriana, sulfato-reducao e metilacao do mercurio com enfoque metodologico na incubacao-extracao de {sup 14}C-leucina

    Energy Technology Data Exchange (ETDEWEB)

    Feijo, Issabella Vitoria Abduche

    2015-07-01

    Mangroves are one of the most important ecosystems when it comes to cycling of various elements, including carbon and mercury. Microbiological processes that occur in sediment are essential for carbon mineralization, its conversion into biomass and for availability of mercury to the food chain. Sulfate-reducing bacteria are one of the main groups responsible for degradation of organic compounds in marine sediments and mercury methylation, especially in the rhizosphere of macrophyte. The aim of this study was to evaluate bacterial production (BP) over different sedimentary profiles as well as mercury methylation (% MeHg), sulfate reduction rates (SRR) and bacterial production in the rhizosphere of a ubiquitous mangrove tree. Radiochemical approaches were used to access bacterial production ({sup 14}C-leucine), sulfate reduction ({sup 35}SO{sub 4}) and mercury methylation ({sup 203}Hg). Study area was located at Coroa Grande (Sepetiba bay) and Jequia mangrove (Guanabara bay). Methodological studies using {sup 14}C-leucine as a tool to assess bacterial production in mangrove sediment were not found. In this context, we tested two leucine uptake methodologies for measuring bacterial production in mangrove sediments according to Baath et al. (2001) Soil Biol. Biochem., v.33,p. 1571-1574 and Fischer and Pusch (1999) Appl. Environ. Microbiol., v.6, p.4411-4418. Our results suggest that an adaptation of both techniques were suitable to measure BP in mangrove sediment. We also provided underlying parameters of the method such as saturation level and linearity of leucine incorporation that can be used as guidance for future studies in mangrove. Once the methodology was established, we accessed BP along a shallow sedimentary profile in three physiographic mangroves types: basin, fringe and riverine. BP was highly heterogeneous in different physiographic types of mangroves and along the sediment profiles.The mangrove located at Guanabara bay presented BP which was 50 times

  5. Effect of COD:SO4 2− Ratio, HRT and Linoleic Acid Concentration on Mesophilic Sulfate Reduction: Reactor Performance and Microbial Population Dynamics

    Directory of Open Access Journals (Sweden)

    Chungman Moon

    2015-05-01

    Full Text Available Biological sulfate (SO42− reduction was examined in anaerobic sequential batch reactors (ASBRs operated under different hydraulic retention times (HRTs ranging from 12 to 36 h and COD (Chemical Oxygen Demand/SO42− ratios of 2.4, 1.6 and 0.8. Competition between SO42− reducing bacteria (SRBs, methane producing archaea (MPAs and homoacetogens (HACs was examined in controls and cultures treated with linoleic acid (LA. The ASBR performance was influenced by the COD/SO42− ratio in control cultures with a SO42− reduction of 87% at a COD/SO42− ratio of 0.8. At a 12 h HRT, in both control and LA treated cultures, greater than 75% SO42− removal was observed under all the conditions examined. In control reactors operating at a 36 h HRT, high levels of MPAs belonging to Methanobacteriales and Methanosarcinales were detected; however, in comparison, under low COD/SO42− ratio and with decreasing HRT conditions, a relative increase in SRBs belonging to Desulfovibrio and Desulfatibacillum was observed. Adding 0.5 g·L−1 LA suppressed Methanobacteriales, while increasing the LA concentration to 1 g·L−1 completely suppressed MPAs with a relative increase in SRBs. HACs belonging to Bacteroidetes were observed in the control and in cultures operated at 12 h HRT with a COD/SO42− ratio of 1.6 and fed 0.5 g·L−1 LA; however, with all other LA levels (0.5 and 1.0 g·L−1 and HRTs (12, 24 and 36 h, HACs were not detected.

  6. Off limits: sulfate below the sulfate-methane transition

    Science.gov (United States)

    Brunner, Benjamin; Arnold, Gail; Røy, Hans; Müller, Inigo; Jørgensen, Bo

    2016-07-01

    One of the most intriguing recent discoveries in biogeochemistry is the ubiquity of cryptic sulfur cycling. From subglacial lakes to marine oxygen minimum zones, and in marine sediments, cryptic sulfur cycling - the simultaneous sulfate consumption and production - has been observed. Though this process does not leave an imprint in the sulfur budget of the ambient environment - thus the term cryptic - it may have a massive impact on other element cycles and fundamentally change our understanding of biogeochemical processes in the subsurface. Classically, the sulfate-methane transition (SMT) in marine sediments is considered to be the boundary that delimits sulfate reduction from methanogenesis as the predominant terminal pathway of organic matter mineralization. Two sediment cores from Aarhus Bay, Denmark reveal the constant presence of sulfate (generally 0.1 to 0.2 mM) below the SMT. The sulfur and oxygen isotope signature of this deep sulfate (34S = 18.9‰, 18O = 7.7‰) was close to the isotope signature of bottom-seawater collected from the sampling site (34S = 19.8‰, 18O = 7.3‰). In one of the cores, oxygen isotope values of sulfate at the transition from the base of the SMT to the deep sulfate pool (18O = 4.5‰ to 6.8‰) were distinctly lighter than the deep sulfate pool. Our findings are consistent with a scenario where sulfate enriched in 34S and 18O is removed at the base of the SMT and replaced with isotopically light sulfate below. Here, we explore scenarios that explain this observation, ranging from sampling artifacts, such as contamination with seawater or auto-oxidation of sulfide - to the potential of sulfate generation in a section of the sediment column where sulfate is expected to be absent which enables reductive sulfur cycling, creating the conditions under which sulfate respiration can persist in the methanic zone.

  7. Assessing the influence of the carbon oxidation-reduction state on organic pollutant biodegradation in algal-bacterial photobioreactors.

    Science.gov (United States)

    Bahr, Melanie; Stams, Alfons J M; De la Rosa, Francisco; García-Encina, Pedro A; Muñoz, Raul

    2011-05-01

    The influence of the carbon oxidation-reduction state (CORS) of organic pollutants on their biodegradation in enclosed algal-bacterial photobioreactors was evaluated using a consortium of enriched wild-type methanotrophic bacteria and microalgae. Methane, methanol and glucose (with CORS -4, -2 and 0, respectively) were chosen as model organic pollutants. In the absence of external oxygen supply, microalgal photosynthesis was not capable of supporting a significant methane and methanol biodegradation due to their high oxygen demands per carbon unit, while glucose was fully oxidized by photosynthetic oxygenation. When bicarbonate was added, removal efficiencies of 37 ± 4% (20 days), 65 ± 4% (11 days) and 100% (2 days) were recorded for CH(4,) CH(3)OH and C(6)H(12)O(6), respectively due to the additional oxygen generated from photosynthetic bicarbonate assimilation. The use of NO(3)(-) instead of NH(4)(+) as nitrogen source (N oxidation-reduction state of +5 vs. -3) resulted in an increase in CH(4) degradation from 0 to 33 ± 3% in the absence of bicarbonate and from 37 ± 4% to 100% in the presence of bicarbonate, likely due to a decrease in the stoichiometric oxygen requirements and the higher photosynthetic oxygen production. Hypothetically, the CORS of the substrates might affect the CORS of the microalgal biomass composition (higher lipid content). However, the total lipid content of the algal-bacterial biomass was 19 ± 7% in the absence and 16 ± 2% in the presence of bicarbonate.

  8. Assessing the influence of the carbon oxidation-reduction state on organic pollutant biodegradation in algal-bacterial photobioreactors

    Energy Technology Data Exchange (ETDEWEB)

    Bahr, Melanie; Garcia-Encina, Pedro A.; Munoz, Raul [Valladolid Univ. (Spain). Dept. of Chemical Engineering and Environmental Technology; Stams, Alfons J.M. [Valladolid Univ. (Spain). Dept. of Chemical Engineering and Environmental Technology; Wageningen Univ. (Netherlands). Lab. of Microbiology; Rosa, Francisco de la [Valladolid Univ. (Spain). Dept. of Analytical Chemistry

    2011-05-15

    The influence of the carbon oxidation-reduction state (CORS) of organic pollutants on their biodegradation in enclosed algal-bacterial photobioreactors was evaluated using a consortium of enriched wild-type methanotrophic bacteria and microalgae. Methane, methanol and glucose (with CORS -4, -2 and 0, respectively) were chosen as model organic pollutants. In the absence of external oxygen supply, microalgal photosynthesis was not capable of supporting a significant methane and methanol biodegradation due to their high oxygen demands per carbon unit, while glucose was fully oxidized by photosynthetic oxygenation. When bicarbonate was added, removal efficiencies of 37 {+-} 4% (20 days), 65 {+-} 4% (11 days) and 100% (2 days) were recorded for CH{sub 4}, CH{sub 3}OH and C{sub 6}H{sub 12}O{sub 6}, respectively due to the additional oxygen generated from photosynthetic bicarbonate assimilation. The use of NO{sub 3}{sup -} instead of NH{sub 4}{sup +} as nitrogen source (N oxidation-reduction state of +5 vs. -3) resulted in an increase in CH4 degradation from 0 to 33 {+-} 3% in the absence of bicarbonate and from 37 {+-} 4% to 100% in the presence of bicarbonate, likely due to a decrease in the stoichiometric oxygen requirements and the higher photosynthetic oxygen production. Hypothetically, the CORS of the substrates might affect the CORS of the microalgal biomass composition (higher lipid content). However, the total lipid content of the algal-bacterial biomass was 19 {+-} 7% in the absence and 16 {+-} 2% in the presence of bicarbonate. (orig.)

  9. A unique isotopic fingerprint during sulfate-driven anaerobic oxidation of methane

    Science.gov (United States)

    Antler, G.; Turchyn, A. V.; Herut, B.; Sivan, O.

    2014-12-01

    Bacterial sulfate reduction is responsible for the majority of anaerobic methane oxidation in modern marine sediments. This sulfate-driven AOM can often metabolize all the methane produced within marine sediments, preventing any from reaching the overlying ocean. In certain areas, however, methane concentrations are high enough to form bubbles, which can reach the seafloor, only partially metabolized through sulfate-driven AOM; these areas where methane bubbles into the ocean are called cold seeps, or methane seeps. We use the sulfur and oxygen isotopes of sulfate (d34SSO4 and d18OSO4) in locations where sulfate-driven AOM is occurring both in methane seeps as well as lower flux methane transition zones to show that in methane seeps, the d34SSO4 and d18OSO4 data during the coupled sulfate reduction fall into a very narrow range and with a close to linear relationship (slope 0.37± 0.01 (R^2= 0.98, n=52, 95% confidence interval). In the studied environments, considerably different physical properties exist, excluding the possibility that this linear relationship can be attributed to physical processes such as diffusion, advection or mixing of two end-members. This unique isotopic signature emerges during bacterial sulfate reduction by methane in 'cold' seeps and differs when sulfate is reduced by either organic matter oxidation or by a slower, diffusive flux of methane within marine sediments. We show also that this unique isotope fingerprint is preserved in the rock record in authigenic build-ups of carbonates and barite associated with methane seeps, and may serve as a powerful tool for identifying catastrophic methane release in the geological record.

  10. Reduction of azo dyes and nitroaromatic compounds by bacterial enzymes from the human intestinal tract

    Energy Technology Data Exchange (ETDEWEB)

    Rafii, F.; Cerniglia, C.E. [Food and Drug Administration, Jefferson, AR (United States)

    1995-06-01

    Several anaerobic bacteria from the human intestinal tract are capable of reducing azo dyes and nitropolycyclic aromatic hydrocarbons to the corresponding aromatic amines with enzymes that have azoreductase and nitroreductase activities. The majority of bacteria with these activities belong to the genera Clostridium and Eubacterium. The azoreductases and nitroreductases from three Clostridium strains and one Eubacterium strain were studied. Both enzymes were produced constitutively in each of the bacteria; the enzymes from various bacteria had different electrophoretic mobilities. The azoreductases from all of the bacteria had immunological homology, as was evident from the cross-reactivity of an antibody raised against the azoreductase of C perfringens with azoreductases from other bacteria. Comparison of azoreductases and nitroreductases showed that they both had identical electrophoretic mobilities on polyacrylamide gels and reacted with the antibody against the azoreductase from C. perfringens. Furthermore, the nitroaromatic compounds competitively inhibited the azoreductase activity. The data indicate that the reduction of both nitroaromatic compounds and azo dyes may be carried out by the same enzyme, which is possibly a flavin adenine dinucleotide dehydrogenase that is synthesized throughout the cell and not associated with any organized subcellular structure. 15 refs., 1 fig., 2 tabs.

  11. Sulfur geochemistry and microbial sulfate reduction during low-temperature alteration of uplifted lower oceanic crust: Insights from ODP Hole 735B

    Science.gov (United States)

    Alford, Susan E.; Alt, Jeffrey C.; Shanks, Wayne C.

    2011-01-01

    Sulfide petrography plus whole rock contents and isotope ratios of sulfur were measured in a 1.5 km section of oceanic gabbros in order to understand the geochemistry of sulfur cycling during low-temperature seawater alteration of the lower oceanic crust, and to test whether microbial effects may be present. Most samples have low SO4/ΣS values (≤ 0.15), have retained igneous globules of pyrrhotite ± chalcopyrite ± pentlandite, and host secondary aggregates of pyrrhotite and pyrite laths in smectite ± iron-oxyhydroxide ± magnetite ± calcite pseudomorphs of olivine and clinopyroxene. Compared to fresh gabbro containing 100–1800 ppm sulfur our data indicate an overall addition of sulfide to the lower crust. Selection of samples altered only at temperatures ≤ 110 °C constrains microbial sulfate reduction as the only viable mechanism for the observed sulfide addition, which may have been enabled by the production of H2 from oxidation of associated olivine and pyroxene. The wide range in δ34Ssulfide values (− 1.5 to + 16.3‰) and variable additions of sulfide are explained by variable εsulfate-sulfide under open system pathways, with a possible progression into closed system pathways. Some samples underwent oxidation related to seawater penetration along permeable fault horizons and have lost sulfur, have high SO4/ΣS (≥ 0.46) and variable δ34Ssulfide (0.7 to 16.9‰). Negative δ34Ssulfate–δ34Ssulfide values for the majority of samples indicate kinetic isotope fractionation during oxidation of sulfide minerals. Depth trends in sulfide–sulfur contents and sulfide mineral assemblages indicate a late-stage downward penetration of seawater into the lower 1 km of Hole 735B. Our results show that under appropriate temperature conditions, a subsurface biosphere can persist in the lower oceanic crust and alter its geochemistry.

  12. Reduction of rainbow trout spleen size by splenectomy does not alter resistance against bacterial cold water disease.

    Science.gov (United States)

    Wiens, Gregory D; Marancik, David P; Zwollo, Patty; Kaattari, Stephen L

    2015-03-01

    In lower vertebrates, the contribution of the spleen to anti-bacterial immunity is poorly understood. We have previously reported a phenotypic and genetic correlation between resistance to Flavobacterium psychrophilum, the causative agent of bacterial cold water disease (BCWD) and spleen somatic index (spleen weight normalized to body weight, SI). Fish families with larger pre-challenge SI values were found to have greater BCWD survival (resistance) following intraperitoneal injection of a lethal dose of F. psychrophilum. Since the mammalian spleen is known to be crucial for capture and destruction of encapsulated bacteria, we tested the hypothesis that reduction of spleen size, by surgical splenectomy, should reduce the survival advantage of the larger-spleen, disease-resistant fish. Experiments were performed using two separate lines of fish that had previously been selected either based on BCWD survival (resistant and susceptible), or selected based on spleen size (high and low SI). Following 65 to 81 days post-surgical recovery, fish were challenged with F. psychrophilum and mortality monitored for a minimum of 21 days. No significant difference in the relative survival was detected between splenectomized or sham-operated groups, while SI of splenectomized fish was reduced to an average of 8-12% of control animals. A positive correlation was observed between the SI, measured at the time of splenectomy, and time-to-death post-challenge. In summary, these experiments argue that larger spleen size alone is not sufficient for greater BCWD resistance, but rather it is an indirect indicator of immunological status.

  13. Impact of well intake systems on bacterial, algae, and organic carbon reduction in SWRO desalination systems, SAWACO, Jeddah, Saudi Arabia

    KAUST Repository

    Dehwah, Abdullah

    2014-07-18

    The intake system can play a significant role in improving the feed water quality and ultimately influence the performance of downstream components of the seawater reverse osmosis desalination processes. In most cases, open-ocean intakes produce poor feed water quality in terms of the abundance of naturally occurring organic matter, which increases the risk of membrane fouling. An alternative intake is the subsurface system, which is based on the riverbank filtration concept that provides natural filtration and biological treatment of the feed water prior to the entry of the water into the desalination plant. The use of subsurface intakes normally improves the raw water quality by reducing suspended solids, algae, bacterial, and dissolved organic carbon concentrations. Therefore, the risk of biofouling caused by these substances can be reduced by implementing the appropriate type of intake system. The use of well intake systems was investigated along the Red Sea shoreline of Saudi Arabia in the Jeddah region. Data were collected from a seawater reverse osmosis (SWRO) plant with a capacity of 10,000 m3/d. The well system produces feed water from an artificial-fill peninsula that was constructed atop of the seabed. Ten wells have been constructed on the peninsula for extracting raw seawater. Water samples were collected from nearby surface seawater as a reference and from selected individual wells. The percentage of algae and bacterial removal by induced filtration process was evaluated by comparison of the seawater concentrations with the well discharges. Transparent exopolymer particles and organic carbon fractions reduction was also measured. The quality of raw water extracted from the well systems was highly improved compared with the raw seawater source. It was observed that algae were virtually 100% removed and the bacterial concentration was significantly removed by the aquifer matrix. The detailed analysis of organic carbon fraction using liquid

  14. Mercury methylation and bacterial activity associated to tropical phytoplankton

    Energy Technology Data Exchange (ETDEWEB)

    Coelho-Souza, Sergio A. [Laboratorio de Tracadores Wolfgang Pfeiffer, SL 62, Instituto de Biofisica Carlos Chagas Filho, Bloco G, Ilha do Fundao, Universidade Federal do Rio de Janeiro (IBCCF/UFRJ), RJ, CEP 21949-900 (Brazil); Guimaraes, Jean R.D. [Laboratorio de Tracadores Wolfgang Pfeiffer, SL 62, Instituto de Biofisica Carlos Chagas Filho, Bloco G, Ilha do Fundao, Universidade Federal do Rio de Janeiro (IBCCF/UFRJ), RJ, CEP 21949-900 (Brazil)]. E-mail: jeanrdg@biof.ufrj.br; Mauro, Jane B.N. [Laboratorio de Tracadores Wolfgang Pfeiffer, SL 62, Instituto de Biofisica Carlos Chagas Filho, Bloco G, Ilha do Fundao, Universidade Federal do Rio de Janeiro (IBCCF/UFRJ), RJ, CEP 21949-900 (Brazil); Miranda, Marcio R. [Laboratorio de Tracadores Wolfgang Pfeiffer, SL 62, Instituto de Biofisica Carlos Chagas Filho, Bloco G, Ilha do Fundao, Universidade Federal do Rio de Janeiro (IBCCF/UFRJ), RJ, CEP 21949-900 (Brazil); Azevedo, Sandra M.F.O. [Laboratorio de Ecofisiologia e Toxicologia de Cianobacterias, IBCCF/UFRJ, RJ (Brazil)

    2006-07-01

    The methylated form of mercury (Hg), methylmercury (MeHg), is one of the most toxic pollutants. Biotic and/or abiotic methylation, often associated to sulfate-reducing bacteria metabolism, occurs in aquatic environments and in many tropical areas, mostly in the periphyton associated to floating macrophyte roots. Data about mercury methylation by phytoplankton are scarce and the aim of this study was to verify the biotic influence in the methylation process in Microcystis aeruginosa and Sineccocystis sp. laboratory strains and in natural populations of phytoplankton from two different aquatic systems, the mesotrophic Ribeirao das Lajes reservoir and hypereutrophic oligohaline Jacarepagua lagoon, Rio de Janeiro state, Brazil. Adapted radiochemical techniques were used to measure sulfate-reduction, mercury methylation and bacterial activity in phytoplankton samples. Methyl-{sup 203}Hg formation from added inorganic {sup 203}Hg and {sup 3}H-Leucine uptake were measured by liquid scintillation as well as sulfate-reduction, estimated as H{sub 2} {sup 35}S produced from added Na{sub 2} {sup 35}SO{sub 4}. There was no significant difference in low methylation potentials (0.37%) among the two cyanobacterium species studied in laboratory conditions. At Ribeirao das Lajes reservoir, there was no significant difference in methylation, bacterial activity and sulfate-reduction of surface sediment between the sampling points. Methylation in sediments (3-4%) was higher than in phytoplankton (1.5%), the opposite being true for bacterial activity (sediment mean 6.6 against 150.3 nmol gdw{sup -1} h{sup -1} for phytoplankton samples). At Jacarepagua lagoon, an expressive bacterial activity (477.1 x 10{sup 3} nmol gdw{sup -1} h{sup -1} at a concentration of 1000 nM leucine) and sulfate-reduction ({approx}21% H{sub 2} {sup 35}S trapped) associated to phytoplankton (mostly cyanobacteria M. aeruginosa) was observed, but mercury methylation was not detected.

  15. Bacterial Community Succession During in situ Uranium Bioremediation: Spatial Similarities Along Controlled Flow Paths

    Energy Technology Data Exchange (ETDEWEB)

    Hwang, Chiachi; Wu, Weimin; Gentry, Terry J.; Carley, Jack; Corbin, Gail A.; Carroll, Sue L.; Watson, David B.; Jardine, Phil M.; Zhou, Jizhong; Criddle, Craig S.; Fields, Matthew W.

    2009-05-22

    Bacterial community succession was investigated in a field-scale subsurface reactor formed by a series of wells that received weekly ethanol additions to re-circulating groundwater. Ethanol additions stimulated denitrification, metal reduction, sulfate reduction, and U(VI) reduction to sparingly soluble U(IV). Clone libraries of SSU rRNA gene sequences from groundwater samples enabled tracking of spatial and temporal changes over a 1.5 y period. Analyses showed that the communities changed in a manner consistent with geochemical variations that occurred along temporal and spatial scales. Canonical correspondence analysis revealed that the levels of nitrate, uranium, sulfide, sulfate, and ethanol strongly correlated with particular bacterial populations. As sulfate and U(VI) levels declined, sequences representative of sulfate-reducers and metal-reducers were detected at high levels. Ultimately, sequences associated with sulfate-reducing populations predominated, and sulfate levels declined as U(VI) remained at low levels. When engineering controls were compared to the population variation via canonical ordination, changes could be related to dissolved oxygen control and ethanol addition. The data also indicated that the indigenous populations responded differently to stimulation for bio-reduction; however, the two bio-stimulated communities became more similar after different transitions in an idiosyncratic manner. The strong associations between particular environmental variables and certain populations provide insight into the establishment of practical and successful remediation strategies in radionuclide-contaminated environments with respect to engineering controls and microbial ecology.

  16. Biocorrosion: pH regulation by sulfate-reducing bacteria. Biocorrosion: regulation du pH par les bacteries sulfato-reductrices

    Energy Technology Data Exchange (ETDEWEB)

    Crolet, J.L. (Societe Nationale des Petroles d' Aquitaine (SNPA), 64 - Pau (France)); Daumas, S. (GRAM, 13 - Aix-en-Provence (France)); Magot, M. (Sanofi Elf Bio Recherches, 31 - Labege (France))

    1992-01-01

    Association between microbiology bacteria metabolisms knowledge and water chemistry corrosion in presence of acid gases CO[sub 2] and H[sub 2]S leads to the conclusion that sulfate reducing bacteria regulate their environment pH around a value corresponding to a no acid production. Experimental results of the proposed model are presented with explanation of pitting corrosion, with a theoretical sorting of the most dangerous strains, and for petroleum exploitation: the potential link between the most severe bacteria corrosion and oxygen entrances, thiosulfates presence and other intermediate oxidation compounds of sulfur. (A.B.). 17 refs., 5 figs.

  17. Influence of sulfate-reducing bacteria on the corrosion of steel in seawater: laboratory and in situ study; Influence des bacteries sulfato-reductrices sur la corrosion d'acier en milieu marin: etude au laboratoire et en milieu marin

    Energy Technology Data Exchange (ETDEWEB)

    Benbouzid-Rollet, N

    1993-07-01

    A fouling reactor was designed to study, the influence of a mixed bio-film on AISI 316 L stainless steel. The bio-film was formed on the steel surface by the fermentative bacterium Vibrio natriegens. The sulfate-reducing bacterium Desulfovibrio vulgaris was then introduced in the reactor and colonized the surface, constituting approximately 5 % of the total population. The settlement of an anaerobic bacterium in the bio-film shows in it the existence of anaerobic micro-niches. Stainless steel electrochemical behavior was analyzed using open circuit potential and potentiodynamic polarization curves. Growth of the bio-film does not induce corrosion, but seems to change the cathodic oxygen reduction kinetics, diminishing the corrosion hazard. This effect increases when D. vulgaris grows in the bio-film. An ennobling of the open circuit potential was observed, similar to field cases already described. A case of drilling corrosion of carbon steel in a harbour area showed the characteristics of anaerobic corrosion related to sulfate-reducing bacteria. The total cultivatable SRB population was quantified and metabolic types were enumerated using specific electron donors. A maximum cell density of 1,1 x 10{sup 8} cells/ cm{sup 2} was estimated, revealing a very important growth of SRB on surfaces. Population structure was different in corroded and non-corroded areas. In corroded area, SRB utilizing benzoate and propionate were more abundant. A strain belonging to the sporulating genus Desulfotomaculum was isolated using these substrates, suggesting a partial aeration in the area of hole appearance. However, in vitro corrosion assays showed that the bacterial population sampled in this area induced a consequent weight loss of steel coupons, in the absence of oxygen. This was observed only with a diversified population, similar to that present in situ. It could not be reproduced with a mixed culture of two purified strains. (author)

  18. Sulfur Isotope Systematics and the Link Between Fluctuating Sulfate Levels and P Recycling in a Low Sulfate, Permanently Anoxic Lake (Lake McCarrons, MN): Implications for the Precambrian Rise of Oxygen

    Science.gov (United States)

    Gomes, M. L.; Hurtgen, M. T.

    2009-12-01

    Seawater sulfate concentrations have been used to track the rise of oxygen in the Precambrian ocean-atmosphere system because the primary mode of sulfate delivery to the ocean is the oxidative weathering of sulfides on land. Ancient seawater sulfate concentrations have been inferred from the extent of sulfur (S) isotope fractionation incurred during bacterial sulfate reduction (BSR) where organisms preferentially utilize 32S (over 34S) in the process of reducing of sulfate to sulfide. Within this context, increased variability in δ34Spyrite values in Proterozoic (~2.3 Ga) sediments—along with a corresponding increase in the isotopic difference between sulfate and pyrite (Δ34S)—has been attributed to an increase in seawater sulfate concentrations (from 1 mM) and inferentially Earth-surface oxygen levels. However, most S isotope studies have been calibrated using modern marine sediments that contain sulfate-reducing bacteria that are adapted to the high concentration of sulfate in the modern ocean (~28mM). In order to better understand S isotope systematics within a low sulfate system and to improve our interpretive construct for S isotope results generated from ancient strata, we explore the magnitude of S isotope fractionations associated with microbial activity in the water column and sediments of a low sulfate (isotope difference between surface water sulfate and bottom water sulfide is ~5‰ (Δ34S) while in situ S isotope fractionations associated with BSR at the sediment-water interface approach 35‰; (3) sulfate reduction rates in the upper 3 cm of organic carbon rich sediment are ~0.1 µM cm-3 d-1, an order of magnitude lower than those recorded under higher (modern marine) sulfate concentrations; and (4) sulfate concentrations influence the efficiency of P recycling (as determined via bag incubation experiments). Here, we suggest that an increase in sulfate levels at ~2.3 Ga, as indicated by larger Δ34S values recorded in strata of this age

  19. Thermophilic (55 - 65°C) and extreme thermophilic (70 - 80°C) sulfate reduction in methanol and formate-fed UASB reactors

    NARCIS (Netherlands)

    Vallero, M.V.G.; Camarero, E.; Lettinga, G.; Lens, P.N.L.

    2004-01-01

    The feasibility of thermophilic (55-65 degreesC) and extreme thermophilic (70-80 degreesC) sulfate-reducing processes was investigated in three lab-scale upflow anaerobic sludge bed (UASB) reactors fed with either methanol or formate as the sole substrates and inoculated with mesophilic granular slu

  20. A New Proof of Concept in Bacterial Reduction: Antimicrobial Action of Violet-Blue Light (405 nm) in Ex Vivo Stored Plasma

    Science.gov (United States)

    Maclean, Michelle; Anderson, John G.; MacGregor, Scott J.; White, Tracy

    2016-01-01

    Bacterial contamination of injectable stored biological fluids such as blood plasma and platelet concentrates preserved in plasma at room temperature is a major health risk. Current pathogen reduction technologies (PRT) rely on the use of chemicals and/or ultraviolet light, which affects product quality and can be associated with adverse events in recipients. 405 nm violet-blue light is antibacterial without the use of photosensitizers and can be applied at levels safe for human exposure, making it of potential interest for decontamination of biological fluids such as plasma. As a pilot study to test whether 405 nm light is capable of inactivating bacteria in biological fluids, rabbit plasma and human plasma were seeded with bacteria and treated with a 405 nm light emitting diode (LED) exposure system (patent pending). Inactivation was achieved in all tested samples, ranging from low volumes to prebagged plasma. 99.9% reduction of low density bacterial populations (≤103 CFU mL−1), selected to represent typical “natural” contamination levels, was achieved using doses of 144 Jcm−2. The penetrability of 405 nm light, permitting decontamination of prebagged plasma, and the nonrequirement for photosensitizing agents provide a new proof of concept in bacterial reduction in biological fluids, especially injectable fluids relevant to transfusion medicine. PMID:27774337

  1. A New Proof of Concept in Bacterial Reduction: Antimicrobial Action of Violet-Blue Light (405 nm in Ex Vivo Stored Plasma

    Directory of Open Access Journals (Sweden)

    Michelle Maclean

    2016-01-01

    Full Text Available Bacterial contamination of injectable stored biological fluids such as blood plasma and platelet concentrates preserved in plasma at room temperature is a major health risk. Current pathogen reduction technologies (PRT rely on the use of chemicals and/or ultraviolet light, which affects product quality and can be associated with adverse events in recipients. 405 nm violet-blue light is antibacterial without the use of photosensitizers and can be applied at levels safe for human exposure, making it of potential interest for decontamination of biological fluids such as plasma. As a pilot study to test whether 405 nm light is capable of inactivating bacteria in biological fluids, rabbit plasma and human plasma were seeded with bacteria and treated with a 405 nm light emitting diode (LED exposure system (patent pending. Inactivation was achieved in all tested samples, ranging from low volumes to prebagged plasma. 99.9% reduction of low density bacterial populations (≤103 CFU mL−1, selected to represent typical “natural” contamination levels, was achieved using doses of 144 Jcm−2. The penetrability of 405 nm light, permitting decontamination of prebagged plasma, and the nonrequirement for photosensitizing agents provide a new proof of concept in bacterial reduction in biological fluids, especially injectable fluids relevant to transfusion medicine.

  2. Reduction of bacterial growth by a vesicular-arbuscular mycorrhizal fungus in the rhizosphere of cucumber (Cucumis sativus L.)

    DEFF Research Database (Denmark)

    Christensen, H.; Jakobsen, I.

    1993-01-01

    with adhering soil, bulk soil, and soil from unplanted tubes were sampled after 4 weeks. Samples were labelled with [H-3]-thymidine and bacteria in different size classes were measured after staining by acridine orange. The presence of VAM decreased the rate of bacterial DNA synthesis, decreased the bacterial...... plants. At the bottom of the tubes, the [H-3]-thymidine incorporation was significantly higher on root tips of mycorrhizal plants. Correspondingly, the bacterial biovolumes of rods with dimension 0.28-0.40 x 1.1-1.6 mum, from the bulk soil in the center of tubes and from root segments in the center...

  3. Combined iron and sulfate reduction biostimulation as a novel approach to enhance BTEX and PAH source-zone biodegradation in biodiesel blend-contaminated groundwater.

    Science.gov (United States)

    Müller, Juliana B; Ramos, Débora T; Larose, Catherine; Fernandes, Marilda; Lazzarin, Helen S C; Vogel, Timothy M; Corseuil, Henry X

    2017-03-15

    The use of biodiesel as a transportation fuel and its growing mandatory blending percentage in diesel increase the likelihood of contaminating groundwater with diesel/biodiesel blends. A 100L-field experiment with B20 (20% biodiesel and 80% diesel, v/v) was conducted to assess the potential for the combined biostimulation of iron and sulfate reducing bacteria to enhance BTEX and PAH biodegradation in a diesel/biodiesel blend-contaminated groundwater. A B20 field experiment under monitored natural attenuation (MNA) was used as a baseline control. Ammonium acetate and a low-cost and sustainable product recovered from acid mine drainage treatment were used to stimulate iron and sulfate-reducing conditions. As a result, benzene and naphthalene concentrations (maximum concentrations were 28.1μgL(-1) and 10.0μgL(-1), respectively) remained lower than the MNA experiment (maximum concentrations were 974.7μgL(-1) and 121.3μgL(-1), respectively) over the whole experiment. Geochemical changes were chronologically consistent with the temporal change of the predominance of Geobacter and GOUTA19 which might be the key players responsible for the rapid attenuation of benzene and naphthalene. To the best of our knowledge, this is the first field experiment to demonstrate the potential for the combined iron and sulfate biostimulation to enhance B20 source-zone biodegradation.

  4. Diversity of sulfur isotope fractionations by sulfate-reducing prokaryotes

    DEFF Research Database (Denmark)

    Detmers, Jan; Brüchert, Volker; Habicht, K S;

    2001-01-01

    Batch culture experiments were performed with 32 different sulfate-reducing prokaryotes to explore the diversity in sulfur isotope fractionation during dissimilatory sulfate reduction by pure cultures. The selected strains reflect the phylogenetic and physiologic diversity of presently known....... Sulfate reducers that oxidized the carbon source completely to CO2 showed greater fractionations than sulfate reducers that released acetate as the final product of carbon oxidation. Different metabolic pathways and variable regulation of sulfate transport across the cell membrane all potentially affect...

  5. Development of methods for measuring microbiological and corrosive activity of sulfate-reducing bacteria: Final report. Mise au point de methodes de mesure de l'activite microbiologique et corrosive des bacteries sulfato-reductrices: Final rapport

    Energy Technology Data Exchange (ETDEWEB)

    1985-01-01

    Two groups of methods for studying microbiological and corrosive events have been followed in this study. They are based on the fact that metal corrosion, in particular of iron, is an electrochemical phenomena even if biological processes can intervene. The first group of methods consisted of classical measurements of the following parameters: (1) corrosion potential; (2) polarization resistance; (3) slope of the anodic and cathodic TAFEL lines; (4) velocity of the general corrosion; and (5) pitting index. The second group of methods is more original, and concerns the potential measurements in ''biological electrical batteries.'' Such a battery consists of two half elements (electrodes immerged in an electrolyte) that are identical at the onset of the experiment except for the presence of sulfate-reducing bacteria in one cell whereas the other one is sterile. The influence of temperature and bacteric population on the corrosion activity has been studied. The temperatures varied between 25 and 45/sup 0/C and the bacteric concentration between 0 and 20,000 bacteria/ml. Bacterial corrosion can already be detected a few days after the start of an experiment. This fast response indicates the potential of this method relative to classical microbiological methods. 29 figs.

  6. Effect of heavy metals and phenol on bacterial decolourisation and COD reduction of sucrose-aspartic acid Maillard product

    Institute of Scientific and Technical Information of China (English)

    Sangeeta Yadav; Ram Chandra

    2013-01-01

    Melanodins are amino-carbonyl complex,predominantly present in sugarcane molasses based distillery wastewater as major source of colourant.The microbial decolourisation of melanoidin is a challenge due to its binding property with other co-pollutants of distillery waste.Results revealed that the presence of Zn2+ (2.00-20.00 mg/L) in melanoidin solution (1200 mg/L) stimulated the bacterial growth and sucrose-aspartic acid Maillard product (SAA) decolourisation as compared to control,while Fe3+ and Mn2+ at the same concentration inhibited the process.However,the presence of phenol (100 mg/L) along with Zn2+,Fe3+ and Mn2+ suppressed the bacterial growth,SAA decolourisation and MnP activity.The shrinkage and reduced number of bacterial cell count at higher concentration of heavy metals in presence of phenol was also observed under scanning electron microscope.

  7. Activation and transfer of sulfate in biological systems (1960); Activation biologique du sulfate et son transfert (1960)

    Energy Technology Data Exchange (ETDEWEB)

    Chapeville, F. [Commissariat a l' Energie Atomique, Saclay (France).Centre d' Etudes Nucleaires

    1960-07-01

    It examines in this review the successive stages of active sulfate formation and its role in biological synthesis of sulfuric esters. The possible role of active sulfate as intermediary in sulfate reduction is also discussed. (author) [French] On examine dans cette etude les stades successifs de la mise en evidence du sulfate actif, son role dans la formation des esters sulfuriques de natures diverses, ainsi que sa participation eventuelle comme intermediaire au cours de la reduction du sulfate. On decrit aussi un procede de preparation du systeme biologique, generateur du sulfate actif et une methode de synthese chimique. (auteur)

  8. Pilot study to evaluate 3 hygiene protocols on the reduction of bacterial load on the hands of veterinary staff performing routine equine physical examinations.

    Science.gov (United States)

    Traub-Dargatz, Josie L; Weese, J Scott; Rousseau, Joyce D; Dunowska, Magdalena; Morley, Paul S; Dargatz, David A

    2006-07-01

    Reduction factors (RFs) for bacterial counts on examiners' hands were compared when performing a standardized equine physical examination, followed by the use of one of 3 hand-hygiene protocols (washing with soap, ethanol gel application, and chlorohexidine-ethanol application). The mean RFs were 1.29 log10 and 1.44 log10 at 2 study sites for the alcohol-gel (62% ethyl alcohol active ingredient) protocols and 1.47 log10 and 1.94 log10 at 2 study sites for the chlorhexidine-alcohol (61% ethyl alcohol plus 1% chlorhexidine active ingredients) protocols, respectively. The RFs were significantly different (P bacterial load on the hands of people after they perform routine physical examinations.

  9. Monitoring Subsurface Microbial Biomass, Community Composition and Physiological Status during Biological Uranium Reduction with Acetate Addition using Lipid Analysis, DNA Arrays and q-PCR

    Science.gov (United States)

    Peacock, A. D.; Long, P. E.; N'Guessan, L.; Williams, K. H.; Chandler, D.

    2011-12-01

    Our objectives for this effort were to investigate microbial community dynamics during each of the distinct terminal electron accepting phases that occur during long-term acetate addition for the immobilization of Uranium. Groundwater was collected from four wells (one up gradient and three down gradient) at three different depths and at four different times (pre-acetate injection, peak iron reduction, iron/sulfate reduction transition and during heavy sulfate reduction). Phospholipid fatty acid analysis (PLFA) results from ground water showed that microbial biomass was highest during Iron reduction and then lower during the transition from Iron reduction to Sulfate reduction and lowest during Sulfate reduction. Microbial community composition parameters as measured by PLFA showed distinct differences with terminal electron accepting status. Monounsaturated PLFA that have been shown to correspond with Gram-negative bacteria and Geobacteracea increased markedly with Iron reduction and then decreased with the onset of sulfate reduction. Bacterial physiological stress levels as measured by PLFA fluctuated with terminal electron acceptor status. Low bacterial stress levels coincided with pre-donor addition and Iron reduction but were much higher during Iron to Sulfate transition and during Sulfate reduction. Microarray results showed the expected progression of microbial signatures from Iron to Sulfate -reducers with changes in acetate amendment and in situ field conditions. The microarray response for Geobacter was highly correlated with qPCR for the same target gene (R2 = 0.84). Probes targeting Desulfobacter and Desulfitobacterium were the most reactive during the Iron to Sulfate transition and into Sulfate reduction, with a consistent Desulfotomaculum signature throughout the field experiment and a general decrease in Geobacter signal to noise ratios during the onset of Sulfate reducing conditions. Nitrate reducers represented by Dechloromonas and Dechlorosoma

  10. Nitrogen and phosphorus removal from wastewater treatment plant effluent via bacterial sulfate reduction in an anoxic bioreactor packed with wood and iron.

    Science.gov (United States)

    Yamashita, Takahiro; Yamamoto-Ikemoto, Ryoko

    2014-09-22

    We investigated the removal of nitrogen and phosphate from the effluent of a sewage treatment plant over a long-term operation in bioreactors packed with different combinations of wood and iron, with a trickling filter packed with foam ceramics for nitrification. The average nitrification rate in the trickling filter was 0.17 kg N/m3∙day and remained at 0.11 kg N/m3∙day even when the water temperature was below 15 °C. The denitrification and phosphate removal rates in the bioreactor packed with aspen wood and iron were higher than those in the bioreactor packed with cedar chips and iron. The bioreactor packed with aspen wood and iron continued to remove nitrate and phosphate for >1200 days of operation. The nitrate removal activity of a biofilm attached to the aspen wood from the bioreactor after 784 days of operation was 0.42 g NO3-N/kg dry weight wood∙ day. There was no increase in the amount of dissolved organic matter in the outflow from the bioreactors.

  11. Nitrogen and Phosphorus Removal from Wastewater Treatment Plant Effluent via Bacterial Sulfate Reduction in an Anoxic Bioreactor Packed with Wood and Iron

    Directory of Open Access Journals (Sweden)

    Takahiro Yamashita

    2014-09-01

    Full Text Available We investigated the removal of nitrogen and phosphate from the effluent of a sewage treatment plant over a long-term operation in bioreactors packed with different combinations of wood and iron, with a trickling filter packed with foam ceramics for nitrification. The average nitrification rate in the trickling filter was 0.17 kg N/m3∙day and remained at 0.11 kg N/m3∙day even when the water temperature was below 15 °C. The denitrification and phosphate removal rates in the bioreactor packed with aspen wood and iron were higher than those in the bioreactor packed with cedar chips and iron. The bioreactor packed with aspen wood and iron continued to remove nitrate and phosphate for >1200 days of operation. The nitrate removal activity of a biofilm attached to the aspen wood from the bioreactor after 784 days of operation was 0.42 g NO3-N/kg dry weight wood∙ day. There was no increase in the amount of dissolved organic matter in the outflow from the bioreactors.

  12. Effect of 2 different premilking teat sanitation routines on reduction of bacterial counts on teat skin of cows on commercial dairy farms.

    Science.gov (United States)

    Baumberger, C; Guarín, J F; Ruegg, P L

    2016-04-01

    Premilking teat sanitation reduces the load of bacteria on teat skin before milking and it is a fundamental practice used to ensure collection of high-quality milk. The objective of this study was to compare reduction in bacterial populations of teat skin after premilking preparation using either predipping with 0.5% iodine followed by drying (conventional; CONV) or using a semiautomated teat scrubber that uses chlorine dioxide (TS; FutureCow, Longwood, FL). Ten farms currently using a commercial teat scrubber system were enrolled. Cows (n=40 per farm) were assigned to CONV (n=198) or TS (n=196) premilking udder preparation. Teat skin swabs were collected before and after udder preparation and analyzed for total bacterial count (TBC), Streptococcus spp., Staphylococcus spp., and gram-negative bacteria (GNB). Reduction (RED) of each bacterial group was defined as the difference in the number of bacteria measured before and after udder preparation. Before udder preparation, Staphylococcus spp. (15,036 cfu/mL) and Streptococcus spp. (12,621 cfu/mL) were the most numerous microflora. Gram-negative bacteria were less numerous (1,538 cfu/mL). A significant treatment by farm interaction was identified for RED of all bacterial counts. Compared with teats prepared using TS, teats prepared using CONV preparation had greater RED of TBC on 3 farms, of Streptococcus spp. on 2 farms, and of Staphylococcus spp. on 1 farm. On all other farms, RED in TBC, Streptococcus spp., and Staphylococcus spp. did not differ based on teat preparation method. Use of TS resulted in greater RED of GNB of teats on 3 farms, but RED in GNB was greater for teats cleaned by CONV on 1 farm; for the other 6 farms, RED of GNB did not differ between methods. For all bacterial counts, an effect of chlorine dioxide concentration used in the teat scrubber was observed. Results from this study suggest both CONV and TS can effectively reduce bacterial counts, but farm conditions and management practices can

  13. Monitoring sulfide and sulfate-reducing bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Tanner, R.S.

    1995-12-31

    Simple yet precise and accurate methods for monitoring sulfate-reducing bacteria (SRB) and sulfide remain useful for the study of bacterial souring and corrosion. Test kits are available to measure sulfide in field samples. A more precise methylene blue sulfide assay for both field and laboratory studies is described here. Improved media, compared to that in API RP-38, for enumeration of SRB have been formulated. One of these, API-RST, contained cysteine (1.1 mM) as a reducing agent, which may be a confounding source of sulfide. While cysteine was required for rapid enumeration of SRB from environmental samples, the concentration of cysteine in medium could be reduced to 0.4 mM. It was also determined that elevated levels of yeast extract (>1 g/liter) could interfere with enumeration of SRB from environmental samples. The API-RST medium was modified to a RST-11 medium. Other changes in medium composition, in addition to reduction of cysteine, included reduction of the concentration of phosphate from 3.4 mM to 2.2 mM, reduction of the concentration of ferrous iron from 0.8 mM to 0.5 mM and preparation of a stock mineral solution to ease medium preparation. SRB from environmental samples could be enumerated in a week in this medium.

  14. Quantifying Heavy Metals Sequestration by Sulfate-Reducing Bacteria in an Acid Mine Drainage-Contaminated Natural Wetland

    OpenAIRE

    Moreau, John W.; Fournelle, John H.; Banfield, Jillian F.

    2013-01-01

    Bioremediation strategies that depend on bacterial sulfate reduction for heavy metals remediation harness the reactivity of these metals with biogenic aqueous sulfide. Quantitative knowledge of the degree to which specific toxic metals are partitioned into various sulfide, oxide, or other phases is important for predicting the long-term mobility of these metals under environmental conditions. Here we report the quantitative partitioning into sedimentary biogenic sulfides of a suite of metals ...

  15. Pilot study to evaluate 3 hygiene protocols on the reduction of bacterial load on the hands of veterinary staff performing routine equine physical examinations

    OpenAIRE

    Josie L Traub-Dargatz; Weese, J Scott; Rousseau, Joyce D.; Dunowska, Magdalena; Morley, Paul S.; Dargatz, David A.

    2006-01-01

    Reduction factors (RFs) for bacterial counts on examiners’ hands were compared when performing a standardized equine physical examination, followed by the use of one of 3 hand-hygiene protocols (washing with soap, ethanol gel application, and chlorohexidine-ethanol application). The mean RFs were 1.29 log10 and 1.44 log10 at 2 study sites for the alcohol-gel (62% ethyl alcohol active ingredient) protocols and 1.47 log10 and 1.94 log10 at 2 study sites for the chlorhexidine-alcohol (61% ethyl ...

  16. Hyperbranched poly(NIPAM) polymers modified with antibiotics for the reduction of bacterial burden in infected human tissue engineered skin.

    Science.gov (United States)

    Shepherd, Joanna; Sarker, Prodip; Rimmer, Stephen; Swanson, Linda; MacNeil, Sheila; Douglas, Ian

    2011-01-01

    The escalating global incidence of bacterial infection, particularly in chronic wounds, is a problem that requires significant improvements to existing therapies. We have developed hyperbranched poly(NIPAM) polymers functionalized with the antibiotics Vancomycin and Polymyxin-B that are sensitive to the presence of bacteria in solution. Binding of bacteria to the polymers causes a conformational change, resulting in collapse of the polymers and the formation of insoluble polymer/bacteria complexes. We have applied these novel polymers to our tissue engineered human skin model of a burn wound infected with Pseudomonas aeruginosa and Staphylococcus aureus. When the polymers were removed from the infected skin, either in a polymer gel solution or in the form of hydrogel membranes, they removed bound bacteria, thus reducing the bacterial load in the infected skin model. These bacteria-binding polymers have many potential uses, including coatings for wound dressings.

  17. Sources of sulfate supporting anaerobic metabolism in a contaminated aquifer

    Science.gov (United States)

    Ulrich, G.A.; Breit, G.N.; Cozzarelli, I.M.; Suflita, J.M.

    2003-01-01

    Field and laboratory techniques were used to identify the biogeochemical factors affecting sulfate reduction in a shallow, unconsolidated alluvial aquifer contaminated with landfill leachate. Depth profiles of 35S-sulfate reduction rates in aquifer sediments were positively correlated with the concentration of dissolved sulfate. Manipulation of the sulfate concentration in samples revealed a Michaelis-Menten-like relationship with an apparent Km and Vmax of approximately 80 and 0.83 ??M SO4-2??day-1, respectively. The concentration of sulfate in the core of the leachate plume was well below 20 ??M and coincided with very low reduction rates. Thus, the concentration and availability of this anion could limit in situ sulfate-reducing activity. Three sulfate sources were identified, including iron sulfide oxidation, barite dissolution, and advective flux of sulfate. The relative importance of these sources varied with depth in the alluvium. The relatively high concentration of dissolved sulfate at the water table is attributed to the microbial oxidation of iron sulfides in response to fluctuations of the water table. At intermediate depths, barite dissolves in undersaturated pore water containing relatively high concentrations of dissolved barium (???100 ??M) and low concentrations of sulfate. Dissolution is consistent with the surface texture of detrital barite grains in contact with leachate. Laboratory incubations of unamended and barite-amended aquifer slurries supported the field observation of increasing concentrations of barium in solution when sulfate reached low levels. At a deeper highly permeable interval just above the confining bottom layer of the aquifer, sulfate reduction rates were markedly higher than rates at intermediate depths. Sulfate is supplied to this deeper zone by advection of uncontaminated groundwater beneath the landfill. The measured rates of sulfate reduction in the aquifer also correlated with the abundance of accumulated iron sulfide

  18. The impact of temperature change on the activity and community composition of sulfate-reducing bacteria in arctic versus temperate marine sediments

    DEFF Research Database (Denmark)

    Robador, Alberto; Brüchert, Volker; Jørgensen, Bo Barker

    2009-01-01

    that was weaker after prolonged incubations, which could imply an acclimatization response rather than a selection process of the SRB community. The microbial community composition was analysed by targeting the 16S ribosomal RNA using catalysed reporter deposition fluorescence in situ hybridization (CARD...... composition of sulfate-reducing bacteria were studied in the permanently cold sediment of north-western Svalbard (Arctic Ocean) and compared with a temperate habitat with seasonally varying temperature (German Bight, North Sea). Short-term 35S-sulfate tracer incubations in a temperature-gradient block......-FISH). The results showed the decline of specific groups of SRB and confirmed a strong impact of increasing temperatures on the microbial community composition of arctic sediment. Conversely, in seasonally changing sediment sulfate reduction rates and sulfate-reducing bacterial abundance changed little in response...

  19. Thermophilic Sulfate-Reducing Bacteria in Cold Marine Sediment

    DEFF Research Database (Denmark)

    ISAKSEN, MF; BAK, F.; JØRGENSEN, BB

    1994-01-01

    C to search for presence of psychrophilic, mesophilic and thermophilic sulfate-reducing bacteria. Detectable activity was initially only in the mesophilic range, but after a lag phase sulfate reduction by thermophilic sulfate-reducing bacteria were observed. No distinct activity of psychrophilic...

  20. Antibiotic reduction campaigns do not necessarily decrease bacterial resistance: the example of methicillin-resistant Staphylococcus aureus.

    Science.gov (United States)

    Kardas-Sloma, Lidia; Boëlle, Pierre-Yves; Opatowski, Lulla; Guillemot, Didier; Temime, Laura

    2013-09-01

    Interventions designed to reduce antibiotic consumption are under way worldwide. While overall reductions are often achieved, their impact on the selection of antibiotic-resistant selection cannot be assessed accurately from currently available data. We developed a mathematical model of methicillin-sensitive and methicillin-resistant Staphylococcus aureus (MSSA and MRSA) transmission inside and outside the hospital. A systematic simulation study was then conducted with two objectives: to assess the impact of antibiotic class-specific changes during an antibiotic reduction period and to investigate the interactions between antibiotic prescription changes in the hospital and the community. The model reproduced the overall reduction in MRSA frequency in French intensive-care units (ICUs) with antibiotic consumption in France from 2002 to 2003 as an input. However, the change in MRSA frequency depended on which antibiotic classes changed the most, with the same overall 10% reduction in antibiotic use over 1 year leading to anywhere between a 69% decrease and a 52% increase in MRSA frequency in ICUs and anywhere between a 37% decrease and a 46% increase in the community. Furthermore, some combinations of antibiotic prescription changes in the hospital and the community could act in a synergistic or antagonistic way with regard to overall MRSA selection. This study shows that class-specific changes in antibiotic use, rather than overall reductions, need to be considered in order to properly anticipate the impact of an antibiotic reduction campaign. It also highlights the fact that optimal gains will be obtained by coordinating interventions in hospitals and in the community, since the effect of an intervention in a given setting may be strongly affected by exogenous factors.

  1. Rhizosphere bacterial community composition responds to arbuscular mycorrhiza, but not to reductions in microbial activity induced by foliar cutting

    DEFF Research Database (Denmark)

    Madsen, Mette Vestergård; Henry, Frédéric; Rangel-Castro, J. Ignacio

    2008-01-01

    Differences in bacterial community composition (BCC) between bulk and rhizosphere soil and between rhizospheres of different plant species are assumed to be strongly governed by quantitative and qualitative rhizodeposit differences. However, data on the relationship between rhizodeposit amounts...... and BCC are lacking. Other soil microorganisms, e.g. arbuscular mycorrhizal fungi (AMF), may also influence BCC. We simulated foliar herbivory (cutting) to reduce belowground carbon allocation and rhizodeposition of pea plants grown either with or without AMF. This reduced soil respiration, rhizosphere...... microbial biomass and bacteriovorous protozoan abundance, whereas none of these were affected by AMF. After labelling plants with 13CO2, root and rhizosphere soil 13C enrichment of cut plants were reduced to a higher extent (24-46%) than shoot 13C enrichment (10-24%). AMF did not affect 13C enrichment...

  2. HPLC based method for the measurement of the reduction of aflatoxin B1 by bacterial cultures isolated from different African foods.

    Science.gov (United States)

    Färber, P; Brost, I; Adam, R; Holzapfel, W

    2000-06-01

    The consumption of fermented foods contaminated with aflatoxin B1 is linked to aflatoxicosis. Aflatoxicosis is a serious problem in developing countries with environmental conditions appropriate for the biosynthesis of AFB1 byAspergillus flavus andAspergillus parasiticus. In Africa, especially in Ghana and Nigeria, there is a very high risk of liver cancer which is caused by the consumption of AFB1-intoxicated, traditionally fermented maize and sorghum products. It is suggested that one way to diminish this health risk might be the reduction of the AFB1 concentration in foods by bacteria. Especially bacteria used for food fermentation processes are of great importance, with a special emphasis on lactic acid bacteria which are involved in traditionally fermented African foods based on maize and sorghum.Most publications dealing with aflatoxin degradation by microorganisms describe a phosphate buffer test system for the performance of degradation experiments. In contrast to that, a test system based on physiological active bacterial and yeast cells has been developed, to assess food fermentation organisms for their ability to reduce the AFB1 concentration in vitro. The aflatoxin B1 concentration in test samples was quatitatively determined by HPLC.The assessment of lactic acid bacteria originating from different German and other European culture collections only showed a very slight reduction of the AFB1 concentration from 3% to 12%. Screening experiments in which other bacterial genera and lactic acid bacteria, isolated from different African foods have been assessed, in most cases showed the same results. However, some bacterial strains, e.g. strains of the genusBacillus derived from European culture collections and strains of the genusLactobacillus isolated from African foods, caused a release of AFB1 which was chemically bound before to components of the test medium and which therefore could not be extracted with chloroform.A process quite similar to that may

  3. Activation by caecal reduction of the azo dye D & C red no. 9 to a bacterial mutagen.

    Science.gov (United States)

    Dillon, D; Combes, R; Zeiger, E

    1994-07-01

    D & C Red No. 9 is a monoazo dye used for manufacturing printing inks, rubber and plastics, and as an additive in cosmetics and drugs. In an NTP carcinogenicity study in rats and mice it induced splenic sarcomas and liver nodules in male rats; no chemical-related tumours were induced in mice. On the basis of its contradictory responses in a range of in vitro tests and its inactivity in several in vivo genotoxicity assays, it has been suggested that the dye may act as a non-genotoxic carcinogen. We tested the dye in the Salmonella mutagenicity assay using several different protocols. The dye was not mutagenic when tested using the standard (aerobic) preincubation protocol. Variable responses were seen when the flavin mononucleotide (FMN) reduction protocol was used. A third protocol was provided by incubating the test compound overnight with a rat caecal preparation under anoxic conditions to reduce the azo bond. Ethyl acetate extracts of this incubation mixture, when tested in the standard preincubation protocol using induced rat liver S9, yielded dose-related mutagenic responses in TA100, and a weak response in TA98. The presuemed major reduction product, 1-amino-2-naphthol (1-A-2-N) was mutagenic to TA100, but not TA98, in standard protocols with S9. The results show that it is necessary to use a protocol in which D & C Red No. 9 is reduced in order to demonstrate the mutagenicity of this dye. The non-genotoxicity previously reported for D & C Red No. 9, may have been due to insufficient reductive cleavage.(ABSTRACT TRUNCATED AT 250 WORDS)

  4. Farklı Hidrolik Bekletme Sürelerinin Anaerobik Perdeli Reaktörde Sülfat İndirgenmesi Üzerine Etkisi / Effect of Different Hydraulic Retention Time (HRT on Sulfate Reduction in Anaerobic Baffled Reactor

    Directory of Open Access Journals (Sweden)

    Şebnem ÖZDEMİR

    2012-12-01

    üresinin 2 gün olduğu çalışma koşullarında çıkış suyundaki KOİ ve SO4-2 verimleri %84 ile %88 olarak gözlemlenirken bekleme süresinin 0,5 gün olduğu çalışma koşullarında ise bu değer %80 ve %75 olarak gözlemlenmiştir. Ayrıca bekleme süresinin 2 gün olduğu çalışma koşullarında son bölmedeki sülfür oluşum verimi % 75 iken, bekleme süresi 0,5 güne indirildiğinde aynı bölmedeki sülfür oluşum veriminin %96’a çıktığı gözlemlenmiştir. Çıkarımlar ve Özgün Değer: Yapılan bu çalışma ile yüksek sülfat konsantrasyona sahip atıksuların arıtımında anaerobik perdeli reaktörün iyi bir alternatif olabileceği kanıtlanmıştır. Ayrıca çıkış sülfat ve sülfür konsantrasyonlarının değişen HBS’den etkilenmediği gözlenmiştir. Effect of Different Hydraulic Retention Time (HRT on Sulfate Reduction in Anaerobic Baffled Reactor Design and Method: The anaerobic baffled reactor (ABR is a modification of up-flow anaerobic sludge blanket (UASB reactor. A laboratory scale ABR was inoculated with an effluent of a full scale anaerobic digester located in Kayseri Wastewater Treatment Plant, Turkey. Before inoculation, the sludge was sieved to remove coarse materials. The ABR was 20 cm wide, 80 cm long, 20 cm deep and constructed from glass, with a working volume of 19 L. Reactor was divided into four equal 4.75 L compartments by vertical baffles, each compartment having down-comer and riser regions created by further vertical baffle. The lower parts of down-comer baffles were angled at 450 in order to direct the flow evenly through the riser. Ethanol and sulfate are consumed as electron donor and electron acceptor, respectively. Sulfate, dissolved sulfide, pH, alkalinity and chemical oxygen demand (COD have measured three times a week. Aim: There are varying structures and concentrations of sulfate compounds in natural waters. In addition, the amount of sulfate is higher in some industrial wastewaters In addition, some

  5. Metabolic Flexibility of Sulfate Reducing Bacteria

    Directory of Open Access Journals (Sweden)

    Caroline M. Plugge

    2011-05-01

    Full Text Available Dissimilatory sulfate-reducing prokaryotes (SRB are a very diverse group of anaerobic bacteria that are omnipresent in nature and play an imperative role in the global cycling of carbon and sulfur. In anoxic marine sediments sulfate reduction accounts for up to 50% of the entire organic mineralization in coastal and shelf ecosystems where sulfate diffuses several meters deep into the sediment. As a consequence, SRB would be expected in the sulfate-containing upper sediment layers, whereas methanogenic Archaea would be expected to succeed in the deeper sulfate-depleted layers of the sediment. Where sediments are high in organic matter, sulfate is depleted at shallow sediment depths, and biogenic methane production will occur. In the absence of sulfate, many SRB ferment organic acids and alcohols, producing hydrogen, acetate, and carbon dioxide, and may even rely on hydrogen- and acetate-scavenging methanogens to convert organic compounds to methane. SRB can establish two different life styles, and these can be termed as sulfidogenic and acetogenic, hydrogenogenic metabolism. The advantage of having different metabolic capabilities is that it raises the chance of survival in environments when electron acceptors become depleted. In marine sediments, SRB and methanogens do not compete but rather complement each other in the degradation of organic matter.Also in freshwater ecosystems with sulfate concentrations of only 10-200 μM, sulfate is consumed efficiently within the top several cm of the sediments. Here, many of the δ-Proteobacteria present have the genetic machinery to perform dissimilatory sulfate reduction, yet they have an acetogenic, hydrogenogenic way of life.In this review we evaluate the physiology and metabolic mode of SRB in relation with their environment.

  6. Bacterial sulphate reduction and mixing processes at the Aespoe Hard Rock Laboratory indicated by groundwater delta34S isotope signatures

    Energy Technology Data Exchange (ETDEWEB)

    Wallin, Bill (Geokema AB (Sweden))

    2011-04-15

    This report includes data mostly obtained from delta34S isotope measurements of groundwater at the Aespoe Island and one sampling from the Laxemar site, southeastern Sweden, during tunnel construction. Early sampling at Aespoe (up to 1992), before tunnel excavation, indicates a groundwater system with multiple sulphur sources. The isotope changes over time in the dissolved sulphate were studied during a sampling campaign in the monitoring phase from 1993 to 1995. A total of 88 samples were collected by SKB between 1992 and 1995 from core-drilled surface boreholes and from boreholes drilled in the tunnel (34 of these samples were collected from the tunnel boreholes). The results of the analyses have been the focus of discussion of the isotope changes with time in the dissolved sulphate (SO{sub 4}{sup 2-}). The results indicate that the sulphur isotope signatures in the dissolved sulphate of the groundwater and those from fracture-filling sulphides at Aespoe originate from multiple sulphur sources in the groundwater at Aespoe and Laxemar. The data may be grouped as follows: a) typically homogeneous marine signatures of dissolved SO{sub 4}{sup 2-} are observed, with delta34S values of approximately +21 per mille CDT at intermediate depths of approximately 100-250 m; b) dissolved sulphate in the groundwater at greater depths (below 600 m) with average values of approximately +10 per mille CDT; and c) a dissolved SO{sub 4}{sup 2-} originating from a mixture of these sulphur sources (100-600m), although there is a difference between a mixture and modification by reduction. Reduced sulphur with low delta34S values is also recorded in fracture-filling sulphides, with delta34S values of approximately 0 to -10 per mille CDT. This may contribute to small changes in the isotope signature of the dissolved SO{sub 4}{sup 2-}, probably by sulphide oxidation in the past. The changes in the delta34S isotope data for dissolved SO{sub 4}{sup 2-} over the 1992-1996 period suggest a

  7. Sulfate reducing bacteria and their activities in oil sands process-affected water biofilm

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Hong; Yu, Tong, E-mail: tong.yu@ualberta.ca; Liu, Yang, E-mail: yang.liu@ualberta.ca

    2015-12-01

    Biofilm reactors were constructed to grow stratified multispecies biofilm in oil sands process-affected water (OSPW) supplemented with growth medium. The development of sulfate reducing bacteria (SRB) within the biofilm and the biofilm treatment of OSPW were evaluated. The community structure and potential activity of SRB in the biofilm were investigated with H{sub 2}S microsensor measurements, dsrB gene-based denaturing gradient gel electrophoresis (DGGE), and the real time quantitative polymerase chain reaction (qPCR). Multispecies biofilm with a thickness of 1000 μm was successfully developed on engineered biocarriers. H{sub 2}S production was observed in the deeper anoxic zone of the biofilm from around 750 μm to 1000 μm below the bulk water-biofilm interface, revealing sulfate reduction in the deeper zone of the stratified biofilm. The biofilm removed chemical oxygen demand (COD), sulfate, and nitrogen. The study expands current knowledge of biofilm treatment of OSPW and the function of anaerobic SRB in OSPW biofilm, and thus provides information for future bioreactor development in the reclamation of OSPW. - Graphical abstract: The development of sulfate reducing bacteria (SRB) within Oil Sands Process-affected Water (OSPW) biofilm and the biofilm treatment of OSPW were evaluated by Liu and coworkers. Combined microsensor and molecular biology techniques were utilized in this study. Their results demonstrated that multispecies biofilm with a thickness of 1000 μm was successfully developed on engineered biocarriers. H{sub 2}S production was observed in the deeper anoxic zone of the biofilm from around 750 μm to 1000 μm below the bulk water-biofilm interface, revealing sulfate reduction in the deeper zone of the biofilm. The biofilm removed chemical oxygen demand (COD), sulfate, and nitrogen. - Highlights: • Biofilm in oil sands wastewater was developed on engineered biocarriers. • Bacterial community and in situ activity of SRB were studied in the

  8. Bio-reduction of Cr(VI) by exopolysaccharides (EPS) from indigenous bacterial species of Sukinda chromite mine, India.

    Science.gov (United States)

    Harish, R; Samuel, Jastin; Mishra, R; Chandrasekaran, N; Mukherjee, A

    2012-07-01

    Chrome mining activity has contributed intensively towards pollution of hexavalent chromium around Sukinda Valley, Orissa, India. In an attempt to study the specific contribution of exopolysaccharides (EPS) extracted from indigenous isolates towards Cr(VI) reduction, three chromium (VI) tolerant strains were isolated from the effluent mining sludge. Based on the tolerance towards Cr(VI) and EPS production capacity, one of them was selected for further work. The taxonomic identity of the selected strain was confirmed to be Enterobacter cloacae (showing 98% similarity in BLAST search to E. cloacae) through 16S rRNA analysis. The EPS production was observed to increase with increasing Cr(VI) concentration in the growth medium, highest being 0.078 at 100 mg/l Cr(VI). The extracted EPS from Enterobacter cloacae SUKCr1D was able to reduce 31.7% of Cr(VI) at 10 mg/l concentration, which was relevant to the prevailing natural concentrations at Sukinda mine effluent sludge. The FT-IR spectral studies confirmed the surface chemical interactions of hexavalent chromium with EPS.

  9. Acidic electrolyzed water as a novel transmitting medium for high hydrostatic pressure reduction of bacterial loads on shelled fresh shrimp

    Directory of Open Access Journals (Sweden)

    Suping eDu

    2016-03-01

    Full Text Available Acidic electrolyzed water (AEW, a novel non-thermal sterilization technology, is widely used in the food industry. In this study, we firstly investigated the effect of AEW as a new pressure transmitting medium for high hydrostatic pressure (AEW-HHP processing on microorganisms inactivation on shelled fresh shrimp. The optimal conditions of AEW-HHP for Vibrio parahaemolyticus inactivation on sterile shelled fresh shrimp were obtained using response surface methodology: NaCl concentration to electrolysis 1.5 g/L, treatment pressure 400 MPa, treatment time 10 min. Under the optimal conditions mentioned above, AEW dramatically enhanced the efficiency of HHP for inactivating V. parahaemolyticus and Listeria monocytogenes on artificially contaminated shelled fresh shrimp, and the log reductions were up to 6.08 and 5.71 log10 CFU/g respectively, while the common HHP could only inactivate the two pathogens up to 4.74 and 4.31 log10 CFU/g respectively. Meanwhile, scanning electron microscopy (SEM showed the same phenomenon. For the naturally contaminated shelled fresh shrimp, AEW-HHP could also significantly reduce the micro flora when examined using plate count and PCR-DGGE. There were also no significant changes, histologically, in the muscle tissues of shrimps undergoing the AEW-HHP treatment. In summary, using AEW as a new transmitting medium for HHP processing is an innovative non thermal technology for improving the food safety of shrimp and other aquatic products.

  10. Characterization of microbial activities and U reduction in a shallow aquifer contaminated by uranium mill tailings.

    Science.gov (United States)

    Elias, D A; Krumholz, L R; Wong, D; Long, P E; Suflita, J M

    2003-07-01

    A characterization of the Shiprock, NM, uranium mill tailing site focused on the geochemical and microbiological factors governing in-situ uranium-redox reactions. Groundwater and aqueous extracts of sediment samples contained a wide concentration range of sulfate, nitrate, and U(VI) with median values of 21.2 mM, 16.1 micro M, and 2.7 micro M, respectively. Iron(III) was not detected in groundwater, but a median value of 0.3 mM in sediment extracts was measured. Bacterial diversity down gradient from the disposal pile reflected the predominant geochemistry with relatively high numbers of sulfate- and nitrate-reducing microorganisms, and smaller numbers of acetogenic, methanogenic, nitrate-dependent Fe(II)-oxidizing, Fe(III)-reducing, and sulfide-oxidizing bacteria. In aquifer slurry incubations, nitrate reduction was always preferred and had a negative impact on sulfate-, Fe(III)-, and U-reduction rates. We also found that sulfate-reduction rates decreased sharply in the presence of clay, while Fe(III)-reduction increased with no clear impact on U reduction. In the absence of clay, iron and sulfate reduction correlated with concentrations of Fe(III) and sulfate, respectively. Rates of U(VI) loss did not correlate with the concentration of any electron acceptor. With the exception of Fe(III), electron donor amendment was largely unsuccessful in stimulating electron acceptor loss over a 2-week incubation period, suggesting that endogenous forms of organic matter were sufficient to support microbial activity. Our findings suggest that efforts to accelerate biological U reduction should initially focus on stimulating nitrate removal.

  11. Bacterial Reduction of Toxic Cr(Ⅵ)into Cr(Ⅲ)%利用细菌还原有毒Cr(Ⅵ)为Cr(Ⅲ)

    Institute of Scientific and Technical Information of China (English)

    Muhammad Faisal; Shahida Hasnain

    2004-01-01

    Two chromium-resistant bacterial strains CrT-1 and CrT-13,which can tolerate K2 CrO4 up to 40 mg·mL-1 on nutrient agar,25 mg·mL-1 K2 CrO4 in nutrient broth,and up to 10 mg·mL-1 in acetate-minimal media,were used in this study.On the basis of 16S rRNA,strain CrT-1 was identified as Ochrobactrum intermedium and CrT-13 as Brevibacterium sp..Uptake of chromate was greater in living cells than in heat-killed cells.Ochrobactrum intermedium CrT-1 reduced 73% and 41% of Cr(Ⅵ)while Brevibacterium CrT-13 reduced 62% and 48% Cr(Ⅵ) at an initial chromate concentration of 750,and 1500 μg·mL-1,after 96 hours with an inoculum size of 9.6×107 cells·mL-1.Different heavy metals at low concentrations did not affect the reduction potential of the strains significantly.Ochrobactrum intermedium CrT-1 reduced 84% and 65% while Brevibacterium CrT-13 reduced 60% and 44% of Cr(Ⅵ)at an initial Cr(Ⅵ)concentration of 250 and 500 μg·mL-1,espectively,in an industrial effluent sample.

  12. Peak to Average Power Ratio Reduction using a Hybrid of Bacterial Foraging and Modified Cuckoo Search Algorithm in MIMO-OFDM System

    Directory of Open Access Journals (Sweden)

    R. Manjith

    2014-05-01

    Full Text Available The Partial Transmit Sequence which reduces the PAPR (Peak-to-Average Power Ratio in Multiple Input Multiple Output Orthogonal Frequency Division Multiplexing (MIMO-OFDM system using a novel optimization algorithm is proposed in this study. This novel optimization algorithm is based on a hybrid of Bacterial Foraging Optimization (BFO and Modified Cuckoo Search algorithm (MCS and is thus called HBFOMCS. In HBFOMCS, reproduction of individuals in a new generation is created, not only by swim and tumble operation as in BFO, but also by MCS. The natural reproduction step of BFO is swapped by the concept of searching best solutions as in MCS which then increases the possibility of generating the elite individuals for next generation. These enhanced reproduction step constitute the ready-to-perform population for the new generation once the initial population is performed by swim and tumble operation. Afterwards, discover probability is applied to abandon the worst solution due to the nature of MCS. HBFOMCS is applied to optimize the best combination from a set of allowed phase factors in Partial Transmit Sequence (PTS technique. The performance of HBFOMCS is compared with BFO, Cuckoo Search (CS and Modified cuckoo search MCS in the PAPR reduction in MIMO-OFDM system, accordingly proving its proficiency.

  13. Carbonate-associated sulfate in lucinid (Bivalvia) shells

    Science.gov (United States)

    Peng, Y.; Bao, H.; Anderson, L.; Engel, A. S.

    2007-12-01

    Symbiosis is a fundamental driver of evolution, with examples ranging from mitochondria in eukaryotic cells to barnacle-whale commensalism. The association between sulfur-oxidizing (thiotrophic) bacteria and the lucinid bivalve clade is particularly intriguing because the inferred antiquity of the relationship (>400 m.y.) seems at odds with the relatively loose ecologic linkage of living members. Because only half of genus-level lucinid taxa are extant, and the δ13C of shell carbonate exhibits no systematic difference between symbiotic and non- symbiotic bivalves, a new morphologically-independent proxy to determine whether fossil taxa possessed thiotrophic endosymbionts is needed. The δ34S of carbonate-associated sulfate (CAS) in bivalve shells may hold promise because biogenic carbonate incorporates sulfate into its crystal structure during biomineralization. Incorporation of bacterially derived SO42- (with a more negative δ34S value due to its reduced sulfur origin) into the lucinid-shell crystal lattice would, therefore, impart a distinctly lower δ34SCAS value than that from seawater SO42-, and would be distinguishable from CAS values of co- occurring heterotrophic bivalves. We measured CAS contents, δ34SCAS and δ18OCAS values of 15 sets of lucinid and co-occurring infaunal and epifaunal heterotrophic bivalve shells collected from modern and Cenozoic shallow marine sites. The modern bivalve shells had variable CAS content, from 100 to 2600 ppm. Epifauna often had the highest concentrations relative to the other ecological groups. The δ34SCAS and δ18OCAS clustered at values corresponding to modern seawater sulfate, but with significant scatter. There was no systematic isotope- compositional difference among all bivalves in the same habitat, or among the same lucinid, infaunal, or epifaunal groups across different sites. The fossil bivalve shells tended to preserve lower CAS concentrations and the isotope compositions further deviated from seawater values

  14. Tyrosine Sulfation of Statherin

    Directory of Open Access Journals (Sweden)

    C. Kasinathan, N. Gandhi, P. Ramaprasad, P. Sundaram, N. Ramasubbu

    2007-01-01

    Full Text Available Tyrosylprotein sulfotransferase (TPST, responsible for the sulfation of a variety of secretory and membrane proteins, has been identified and characterized in submandibular salivary glands (William et al. Arch Biochem Biophys 1997; 338: 90-96. In the present study we demonstrate the sulfation of a salivary secretory protein, statherin, by the tyrosylprotein sulfotransferase present in human saliva. Optimum statherin sulfation was observed at pH 6.5 and at 20 mm MnCl2. Increase in the level of total sulfation was observed with increasing statherin concentration. The Km value of tyrosylprotein sulfotransferase for statherin was 40 μM. Analysis of the sulfated statherin product on SDS-polyacrylamide gel electrophoresis followed by autoradiography revealed 35S-labelling of a 5 kDa statherin. Further analysis of the sulfated statherin revealed the sulfation on tyrosyl residue. This study is the first report demonstrating tyrosine sulfation of a salivary secretory protein. The implications of this sulfation of statherin in hydroxyapatite binding and Actinomyces viscosus interactions are discussed.

  15. Roles of heparan sulfate sulfation in dentinogenesis.

    Science.gov (United States)

    Hayano, Satoru; Kurosaka, Hiroshi; Yanagita, Takeshi; Kalus, Ina; Milz, Fabian; Ishihara, Yoshihito; Islam, Md Nurul; Kawanabe, Noriaki; Saito, Masahiro; Kamioka, Hiroshi; Adachi, Taiji; Dierks, Thomas; Yamashiro, Takashi

    2012-04-06

    Cell surface heparan sulfate (HS) is an essential regulator of cell signaling and development. HS traps signaling molecules, like Wnt in the glycosaminoglycan side chains of HS proteoglycans (HSPGs), and regulates their functions. Endosulfatases Sulf1 and Sulf2 are secreted at the cell surface to selectively remove 6-O-sulfate groups from HSPGs, thereby modifying the affinity of cell surface HSPGs for its ligands. This study provides molecular evidence for the functional roles of HSPG sulfation and desulfation in dentinogenesis. We show that odontogenic cells are highly sulfated on the cell surface and become desulfated during their differentiation to odontoblasts, which produce tooth dentin. Sulf1/Sulf2 double null mutant mice exhibit a thin dentin matrix and short roots combined with reduced expression of dentin sialophosphoprotein (Dspp) mRNA, encoding a dentin-specific extracellular matrix precursor protein, whereas single Sulf mutants do not show such defective phenotypes. In odontoblast cell lines, Dspp mRNA expression is potentiated by the activation of the Wnt canonical signaling pathway. In addition, pharmacological interference with HS sulfation promotes Dspp mRNA expression through activation of Wnt signaling. On the contrary, the silencing of Sulf suppresses the Wnt signaling pathway and subsequently Dspp mRNA expression. We also show that Wnt10a protein binds to cell surface HSPGs in odontoblasts, and interference with HS sulfation decreases the binding affinity of Wnt10a for HSPGs, which facilitates the binding of Wnt10a to its receptor and potentiates the Wnt signaling pathway, thereby up-regulating Dspp mRNA expression. These results demonstrate that Sulf-mediated desulfation of cellular HSPGs is an important modification that is critical for the activation of the Wnt signaling in odontoblasts and for production of the dentin matrix.

  16. Quantifying heavy metals sequestration by sulfate-reducing bacteria in an Acid mine drainage-contaminated natural wetland.

    Science.gov (United States)

    Moreau, John W; Fournelle, John H; Banfield, Jillian F

    2013-01-01

    Bioremediation strategies that depend on bacterial sulfate reduction for heavy metals remediation harness the reactivity of these metals with biogenic aqueous sulfide. Quantitative knowledge of the degree to which specific toxic metals are partitioned into various sulfide, oxide, or other phases is important for predicting the long-term mobility of these metals under environmental conditions. Here we report the quantitative partitioning into sedimentary biogenic sulfides of a suite of metals and metalloids associated with acid mine drainage contamination of a natural estuarine wetland for over a century.

  17. Quantifying heavy metals sequestration by sulfate-reducing bacteria in an acid mine drainage-contaminated wetland

    Directory of Open Access Journals (Sweden)

    John W Moreau

    2013-03-01

    Full Text Available Bioremediation strategies that depend on bacterial sulfate reduction for heavy metals remediation harness the reactivity of these metals with biogenic aqueous sulfide. Quantitative knowledge of the degree to which specific toxic metals are partitioned into various sulfide, oxide, or other phases is important for predicting the long-term mobility of these metals under environmental conditions. Here we report the quantitative partitioning into sedimentary biogenic sulfides of a suite of metals and metalloids associated with acid mine drainage contamination of a natural estuarine wetland for over a century.

  18. METABOLISM OF SULFATE-REDUCING PROKARYOTES

    NARCIS (Netherlands)

    HANSEN, TA

    1994-01-01

    Dissimilatory sulfate reduction is carried out by a heterogeneous group of bacteria and archaea that occur in environments with temperatures up to 105 degrees C. As a group together they have the capacity to metabolize a wide variety of compounds ranging from hydrogen via typical organic fermentatio

  19. Theoretical study on the reactivity of sulfate species with hydrocarbons

    Science.gov (United States)

    Ma, Q.; Ellis, G.S.; Amrani, A.; Zhang, T.; Tang, Y.

    2008-01-01

    The abiotic, thermochemically controlled reduction of sulfate to hydrogen sulfide coupled with the oxidation of hydrocarbons, is termed thermochemical sulfate reduction (TSR), and is an important alteration process that affects petroleum accumulations in nature. Although TSR is commonly observed in high-temperature carbonate reservoirs, it has proven difficult to simulate in the laboratory under conditions resembling nature. The present study was designed to evaluate the relative reactivities of various sulfate species in order to provide greater insight into the mechanism of TSR and potentially to fill the gap between laboratory experimental data and geological observations. Accordingly, quantum mechanics density functional theory (DFT) was used to determine the activation energy required to reach a potential transition state for various aqueous systems involving simple hydrocarbons and different sulfate species. The entire reaction process that results in the reduction of sulfate to sulfide is far too complex to be modeled entirely; therefore, we examined what is believed to be the rate limiting step, namely, the reduction of sulfate S(VI) to sulfite S(IV). The results of the study show that water-solvated sulfate anions SO42 - are very stable due to their symmetrical molecular structure and spherical electronic distributions. Consequently, in the absence of catalysis, the reactivity of SO42 - is expected to be extremely low. However, both the protonation of sulfate to form bisulfate anions (HSO4-) and the formation of metal-sulfate contact ion-pairs could effectively destabilize the sulfate molecular structure, thereby making it more reactive. Previous reports of experimental simulations of TSR generally have involved the use of acidic solutions that contain elevated concentrations of HSO4- relative to SO42 -. However, in formation waters typically encountered in petroleum reservoirs, the concentration of HSO4- is likely to be significantly lower than the levels

  20. Mechanisms of bacterial resistance to chromium compounds.

    Science.gov (United States)

    Ramírez-Díaz, Martha I; Díaz-Pérez, César; Vargas, Eréndira; Riveros-Rosas, Héctor; Campos-García, Jesús; Cervantes, Carlos

    2008-06-01

    Chromium is a non-essential and well-known toxic metal for microorganisms and plants. The widespread industrial use of this heavy metal has caused it to be considered as a serious environmental pollutant. Chromium exists in nature as two main species, the trivalent form, Cr(III), which is relatively innocuous, and the hexavalent form, Cr(VI), considered a more toxic species. At the intracellular level, however, Cr(III) seems to be responsible for most toxic effects of chromium. Cr(VI) is usually present as the oxyanion chromate. Inhibition of sulfate membrane transport and oxidative damage to biomolecules are associated with the toxic effects of chromate in bacteria. Several bacterial mechanisms of resistance to chromate have been reported. The best characterized mechanisms comprise efflux of chromate ions from the cell cytoplasm and reduction of Cr(VI) to Cr(III). Chromate efflux by the ChrA transporter has been established in Pseudomonas aeruginosa and Cupriavidus metallidurans (formerly Alcaligenes eutrophus) and consists of an energy-dependent process driven by the membrane potential. The CHR protein family, which includes putative ChrA orthologs, currently contains about 135 sequences from all three domains of life. Chromate reduction is carried out by chromate reductases from diverse bacterial species generating Cr(III) that may be detoxified by other mechanisms. Most characterized enzymes belong to the widespread NAD(P)H-dependent flavoprotein family of reductases. Several examples of bacterial systems protecting from the oxidative stress caused by chromate have been described. Other mechanisms of bacterial resistance to chromate involve the expression of components of the machinery for repair of DNA damage, and systems related to the homeostasis of iron and sulfur.

  1. Microbial dehalogenation of trichlorophenol by a bacterial consortium: characterization and mechanism

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    Chlorinated phenolic compounds are a class of toxic and refractory organic pollutants. The pollution caused by chlorophenols poses serious ecological and environmental problems. A stable bacterial consortium capable of reductively dechlorinating trichlorophenol was isolated using chlorophenol as the sole source of carbon and energy. The physiological characteristics of the mixed cultures were studied and the results show that the consortium could use pyruvate as the carbon and energy source. The fermentation of pyruvate, sulfate reduction and dechlorination process proceeded strictly in succession within this consortium. The effect of specific inhibitors on the dechlorinating activity of the consortium was investigated, and the results indicate that sulfate and molybdate (1 mmol/L) have a strong inhibitive influence on the dechlorination activity. Fluorescence in situ hybridization (FISH) technique was applied to analyzing the composition of the consortium and the results reveal that one major subpopulation within the consortium was phylogenetically affiliated to gamma and delta subclass of Proteobacteria.

  2. Processes affecting δ34S and δ18O values of dissolved sulfate in alluvium along the Canadian River, central Oklahoma, USA

    Science.gov (United States)

    Tuttle, Michele L.W.; Breit, George N.; Cozzarelli, Isabelle M.

    2009-01-01

    The δ34S and δ18O values for dissolved sulfate in groundwater are commonly used in aquifer studies to identify sulfate reservoirs and describe biogeochemical processes. The utility of these data, however, often is compromised by mixing of sulfate sources within reservoirs and isotope fractionation during sulfur redox cycling. Our study shows that, after all potential sulfate sources are identified and isotopically characterized, the δ34SSO4 and δ18OSO4 values differentiate processes such as sulfate-source mixing, sulfide oxidation, barite dissolution, and organosulfur decomposition. During bacterial reduction of sulfate, the values reflect kinetic sulfur isotope fractionation and exchange of oxygen isotopes between sulfate and water. Detailed analysis of the chemistry (Cl and SO4 concentrations) and isotopic composition (δ2HH2Oand δ18OH2O) of groundwater in an alluvial aquifer in Central Oklahoma, USA allowed the identification of five distinct end members that supply water to the aquifer (regional groundwater flowing into the study area, river water, leachate from a closed landfill that operated within the site, rain, and surface runoff). The δ34SSO4 and δ18OSO4 values in each end member differentiated three sources of sulfate: sulfate dissolved from Early to Late Permian rocks within the drainage basin (δ34SSO4 = 8–12‰ and δ18OSO4 = 10‰), iron sulfides oxidized by molecular oxygen during low water-table levels (δ34SSO4 = − 16‰ and δ18OSO4 = 10‰), and organosulfur compounds (predominately ester sulfates) from decomposition of vegetation on the surface and from landfill trash buried in the alluvium (δ34SSO4 = 8‰ and δ18OSO4 = 6‰). During bacterial reduction of these sulfate sources, similar isotope fractionation processes are recorded in the parallel trends of increasing δ34SSO4 and δ18OSO4 values. When extensive reduction occurs, the kinetic sulfur isotope fractionation (estimated by εH2S–SO4 = − 23

  3. Commercial Application of Technique for Removing Sulfates from Reforming Catalyst

    Institute of Scientific and Technical Information of China (English)

    JiChangqing

    2002-01-01

    In the course of reduction of reforming catalyst by not hydrogen a certain amount of chlorine containing compounds is added to the recycle hydrogen to facilitate the reduction of sulfates.The outcome of commercial application of this technique has revealed that the procedure of "regeneration by chlorination→reduction→sulfate removal→sulfiding and oil feed-in"aimed at sulate removal is very simple and can recover the reaction activity of reforming catalyst after having been poisoned by sulfates.This procedure can be disseminated for application in refineries.

  4. Contribution to the study of the role of sulfate-reducing bacteria in bio-corrosion phenomenon; Contribution a l'etude du role des bacteries sulfato-reductrices dans les phenomenes de biocorrosion

    Energy Technology Data Exchange (ETDEWEB)

    Chatelus, C

    1987-11-15

    By their metabolic activities of hydrogen consumption and of sulfides production, the sulfate-reducing bacteria are the main bacteria responsible of the metallic corrosion phenomena in the absence of oxygen. A physiological and enzymatic study of some Desulfovibrio has contributed to the understanding of the role of these bacteria in the anaerobic bio-corrosion phenomena. Desulfovibrio (D.) vulgaris in organic medium, after having oxidized the lactate, consumes the hydrogen formed by the electrochemical reaction of iron dissolution. The Desulfovibrio can be responsible either of a corrosion by a direct contact with the metal in using the H{sub 2} layer formed at its surface, (bacteria are then adsorbed at the surface because of an iron sulfide crystalline lattice), or of a distant corrosion in consuming the dissolved or gaseous hydrogen. As their hydrogenases can be stable in time independently of the cellular structure (D. vulparis) and active at high temperatures (to 70 C - 75 C) (D. baculatus), these bacteria can act in conditions incompatible with the viability of cells but compatible with the enzymatic expression. A study in terms of temperature has shown that inside the mesophilic group of the Desulfovibrio, the behaviour towards this parameter is specific to each bacteria, that accounts for the permanent presence of the representatives of this population in sites where the temperature variations are important. A change of some degrees Celsius can induce modifications in the yields of bacteria growth and by a consequence in variations in the corrosion intensity. Moreover, sulfate D. multispirans can reduce with specific velocities of different growth, the nitrate, the nitrite and the fumarate. Some sulfato-reducing could then adapt themselves to the variations of concentrations in electron acceptors and metabolize the oxidized substances used as biocides too. The choice of an electron acceptor rather than another do not depend uniquely of the specificity of

  5. Performance of a haloalkaliphilic bioreactor and bacterial community shifts under different COD/SO{sub 4}{sup 2−} ratios and hydraulic retention times

    Energy Technology Data Exchange (ETDEWEB)

    Zhou, Jie-Min [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); University of Chinese Academy of Sciences, Beijing 100049 (China); Song, Zi-Yu [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); Yan, Dao-Jiang; Liu, Yi-Lan [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); University of Chinese Academy of Sciences, Beijing 100049 (China); Yang, Mao-Hua [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); Cao, Hong-Bin [National Engineering Laboratory for Hydrometallurgical Cleaner Production Technology, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); Xing, Jian-Min, E-mail: jmxing@home.ipe.ac.cn [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China)

    2014-06-01

    Highlights: • Haloalkaliphilic microorganisms were used to reduce sulfate. • Sulfide concentration reached up to 1603 mg/L. • There was no sulfide inhibition to haloalkaliphilic microorganisms. • Bacterial community of haloalkaliphilic bioreactor was studied. - Abstract: Sulfur dioxide from flue gas was converted into sulfate after the absorption of alkaline solutions. Haloalkaliphilic microorganisms have been used in reducing sulfate to decrease expenses and avoid sulfide inhibition. The effects of different COD/SO{sub 4}{sup 2−} ratios and hydraulic retention times (HRTs) on the sulfate removal efficiency and bacterial community were investigated in model experiments. Ethanol showed better performance as an electron donor than lactate. The optimum COD/SO{sub 4}{sup 2−} ratio and HRT were 4.0 and 18 h, respectively, with respective sulfate removal efficiency and rate of 97.8 ± 1.11% and 6.26 ± 0.0710 g/L d. Sulfide concentrations reached 1603 ± 3.38 mg/L. Based on denaturing gradient gel electrophoresis analysis of 16S rDNA, the major sulfate-reducing bacterium (SRB) was Desulfonatronovibrio sp., which was only detected at a COD/SO{sub 4}{sup 2−} ratio of 4.0 using ethanol as an electron donor. Different HRTs had no significant effect on the band corresponding to this species. PCR results show that methane-producing archaea (MPA) were from the acetoclastic methanogenic family Methanosarcinaceae. Quantitative real-time PCR did not demonstrate any significant competition between SRB and MPA. The findings of this study indicate that sulfate reduction, nitrate reduction, and sulfide oxidization may occur in the same bioreactor.

  6. Techniques for the conversion to carbon dioxide of oxygen from dissolved sulfate in thermal waters

    Science.gov (United States)

    Nehring, N.L.; Bowen, P.A.; Truesdell, A.H.

    1977-01-01

    The fractionation of oxygen isotopes between dissolved sulfate ions and water provides a useful geothermometer for geothermal waters. The oxygen isotope composition of dissolved sulfate may also be used to indicate the source of the sulfate and processes of formation. The methods described here for separation, purification and reduction of sulfate to prepare carbon dioxide for mass spectrometric analysis are modifications of methods by Rafter (1967), Mizutani (1971), Sakai and Krouse (1971), and Mizutani and Rafter (1969). ?? 1976.

  7. Characterization of U(VI) reduction in contaminated sediments with slow-degrading electron donor source

    Science.gov (United States)

    Wu, W.; Watson, D. B.; Zhang, G.; Mehlhorn, T.; Lowe, K.; Earles, J.; Phillips, J.; Kelly, S. D.; Boyanov, M.; Kemner, K. M.; Schadt, C.; Criddle, C. S.; Jardine, P. M.; Brooks, S. C.

    2011-12-01

    In order to select sustainable, high efficiency and cost effective electron donor source, oleate and emulsified vegetable oil (EVO) were tested uranium (VI) reduction in comparison with ethanol in microcosms using uranium contaminated sediments and groundwater from the US DOE Oak Ridge Integrated Field Research Challenge (ORIFRC) site. The effect of initial sulfate concentration on U(VI) reduction was also tested. Both oleate and EVO were effective electron donor sources for U(VI) reduction. Accumulation of acetate as a major product and the removal of aqueous U(VI) were observed and were associated with sulfate reduction. Both oleate and EVO supported U(VI) reduction but at slower rates with a comparable but slightly lower extent of reduction than ethanol. X-ray absorption near-edge spectroscopy (XANES) analysis confirmed reduction of U(VI) to U(IV). The extent of U(VI) reduction in solid phase was negatively influenced by aqueous calcium concentration. The majority of electrons of the three substrates were consumed by sulfate reduction, Fe(III) reduction, and methanogenesis. Initial U(VI) concentration in the aqueous phase increased with increased sulfate concentration (1 versus 5 mM), likely due to U(VI) desorption from the solid phase. At the higher initial sulfate concentration more U(VI) was reduced and fewer electrons were used in methanogenesis. Analysis of bacterial and archeal populations using 16S rRNA gene libraries showed a significant increase in Deltaproteobacteria after biostimulation. The microbial community structures developed with oleate and EVO were significantly distinct from those developed with ethanol. Bacteria similar to Desulforegula spp. was predominant for oleate and EVO degradation but were not observed in ethanol-amended microcosms. Known U(VI)-reducing bacteria in the microcosms amended with the three electron donor sources included iron(III) reducing Geobacter spp. but in lower abundances than sulfate-reducing Desulfovibrio spp. The

  8. Localized corrosion of carbon steels due to sulfate-reducing bacteria. Development of a specific sensor; Corrosion localisee des aciers au carbone induite par des bacteries sulfato-reductrices. Developpement d'un capteur specifique

    Energy Technology Data Exchange (ETDEWEB)

    Monfort Moros, N.

    2001-11-01

    This work concerns the microbiologically influenced corrosion of carbon steels in saline anaerobic media (3% of NaCl) containing sulfato-reducing bacteria (Desulfovibrio gabonensis, DSM 10636). In these media, extreme localised corrosion occurs by pitting under the bio-film covering the metallic substrate. A sensor with concentric electrodes was designed to initiate the phenomenon of bio-corrosion, recreating the favourable conditions for growth of a corrosion pit, and then measuring the corrosion current maintained by bacterial activity. The pit initiation was achieved through either of two methods. The electrochemical conditioning involved driving the potential difference between inner and outer electrodes to values corresponding to a galvanic corrosion that can be maintained by the bacterial metabolism. The mechanical process involved removal of a portion of the bio-film by scratching, yielding galvanic potential differences equivalent to that found by the conditioning technique. This protocol was found to be applicable to a bio-corrosion study on industrial site for the monitoring of the metallic structures deterioration (patent EN 00/06114, May 2000). Thereafter, a fundamental application uses the bio-corrosion sensor for Electrochemical Impedance Spectroscopy (EIS), Electrochemical Noise Analysis (ENA) and current density cartography by the means of micro-electrodes. Thus, the EIS technique reveals the importance of the FeS corrosion products for initiation of bio-corrosion start on carbon steel. In addition, depending on the method used to create a pit, the ENA gives rise to supplementary processes (gaseous release) disturbing the bio-corrosion detection. The beginning of a bio-corrosion process on a clean surface surrounded with bio-film was confirmed by the current density cartography. These different results establish the sensor with concentric electrodes as an indispensable tool for bio-corrosion studies, both in the laboratory and on industrial sites

  9. Elucidating microbial processes in nitrate- and sulfate-reducing systems using sulfur and oxygen isotope ratios: The example of oil reservoir souring control

    Science.gov (United States)

    Hubert, Casey; Voordouw, Gerrit; Mayer, Bernhard

    2009-07-01

    Sulfate-reducing bacteria (SRB) are ubiquitous in anoxic environments where they couple the oxidation of organic compounds to the production of hydrogen sulfide. This can be problematic for various industries including oil production where reservoir "souring" (the generation of H 2S) requires corrective actions. Nitrate or nitrite injection into sour oil fields can promote SRB control by stimulating organotrophic nitrate- or nitrite-reducing bacteria (O-NRB) that out-compete SRB for electron donors (biocompetitive exclusion), and/or by lithotrophic nitrate- or nitrite-reducing sulfide oxidizing bacteria (NR-SOB) that remove H 2S directly. Sulfur and oxygen isotope ratios of sulfide and sulfate were monitored in batch cultures and sulfidic bioreactors to evaluate mitigation of SRB activities by nitrate or nitrite injection. Sulfate reduction in batch cultures of Desulfovibrio sp. strain Lac15 indicated typical Rayleigh-type fractionation of sulfur isotopes during bacterial sulfate reduction (BSR) with lactate, whereas oxygen isotope ratios in unreacted sulfate remained constant. Sulfur isotope fractionation in batch cultures of the NR-SOB Thiomicrospira sp. strain CVO was minimal during the oxidation of sulfide to sulfate, which had δ18O SO4 values similar to that of the water-oxygen. Treating an up-flow bioreactor with increasing doses of nitrate to eliminate sulfide resulted in changes in sulfur isotope ratios of sulfate and sulfide but very little variation in oxygen isotope ratios of sulfate. These observations were similar to results obtained from SRB-only, but different from those of NR-SOB-only pure culture control experiments. This suggests that biocompetitive exclusion of SRB took place in the nitrate-injected bioreactor. In two replicate bioreactors treated with nitrite, less pronounced sulfur isotope fractionation and a slight decrease in δ18O SO4 were observed. This indicated that NR-SOB played a minor role during dosing with low nitrite and that

  10. Direct Sulfation of Limestone

    DEFF Research Database (Denmark)

    Hu, Guilin; Dam-Johansen, Kim; Wedel, Stig

    2007-01-01

    -state diffusion. The nucleation and crystal grain growth of the solid product, and this mixed control mechanism provide satisfactory explanations of the various phenomena related to the direct sulfation of limestone, such as porosity in the product layer, the variation of the apparent reaction orders of SO2, O-2...

  11. The platelet glycoprotein thrombospondin binds specifically to sulfated glycolipids.

    Science.gov (United States)

    Roberts, D D; Haverstick, D M; Dixit, V M; Frazier, W A; Santoro, S A; Ginsburg, V

    1985-08-05

    The human platelet glycoprotein thrombospondin (TSP) binds specifically and with high affinity to sulfatides (galactosylceramide-I3-sulfate). Binding of 125I-TSP to lipids from sheep and human erythrocytes and human platelets resolved on thin layer chromatograms indicates that sulfatides are the only lipids in the membrane which bind TSP. Binding to less than 2 ng of sulfatide could be detected. TSP failed to bind to other purified lipids including cholesterol 3-sulfate, phospholipids, neutral glycolipids, and gangliosides. Binding of 125I-TSP was inhibited by unlabeled TSP, by low pH, and by reduction of intersubunit disulfide bonds with dithiothreitol. A monoclonal antibody against TSP (A2.5), which inhibits hemagglutination and agglutination of fixed activated platelets by TSP, strongly inhibited TSP binding to sulfatides. A second monoclonal antibody (C6.7), which inhibits hemagglutination and aggregation of thrombin-activated live platelets, weakly inhibited sulfatide binding. Binding was inhibited by high ionic strength and by some monosaccharide sulfates including methyl-alpha-D-GlcNAc-3-sulfate. Neutral sugars did not inhibit. Fucoidan, a sulfated fucan, strongly inhibited binding with 50% inhibition at 0.3 micrograms/ml fucoidan. Other sulfated polysaccharides including heparin and dextran sulfates were good inhibitors, whereas hyaluronic acid and keratan sulfate were very weak.

  12. Efficacy of acetate-amended biostimulation for uranium sequestration: Combined analysis of sediment/groundwater geochemistry and bacterial community structure

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Jie; Veeramani, Harish; Qafoku, Nikolla P.; Singh, Gargi; Riquelme, Maria V.; Pruden, Amy; Kukkadapu, Ravi K.; Gartman, Brandy N.; Hochella, Michael F.

    2017-03-01

    Systematic flow-through column experiments were conducted using sediments and ground water collected from different subsurface localities at the U.S. Department of Energy’s Integrated Field Research Challenge site in Rifle, Colorado. The principal purpose of this study is to gain a better understanding of the interactive effects of groundwater geochemistry, sediment mineralogy, and indigenous bacterial community structures on the efficacy of uranium removal from the groundwater with/without acetate amendment. Overall, we find that the subtle variations in the sediments’ mineralogy, particle size, redox conditions, as well as contents of metal(loid) co-contaminants showed a pronounced effect on the associated bacterial population and composition, which mainly determines the system’s performance with respect to uranium removal. Positive relationship was identified between the abundance of dissimilatory sulfate-reduction genes (i.e., drsA), markers of sulfate-reducing bacteria, and the sediments’ propensity to sequester aqueous uranium. In contrast, no obvious connections were observed between the abundance of common iron-reducing bacteria, e.g., Geobacter spp., and the sediments’ ability to sequester uranium. In the sediments with low bacterial biomass and the absence of sulfate-reducing conditions, abiotic adsorption onto mineral surfaces such as phyllosilicates likely played a relatively major role in the attenuation of aqueous uranium; however, in these scenarios, acetate amendment induced detectable rebounds in the effluent uranium concentrations. The results of this study suggest that reductive immobilization of uranium can be achieved under predominantly sulfate-reducing conditions, and provide insight into the integrated roles of various biogeochemical components in long-term uranium sequestration.

  13. Sulfate and dissolved sulfide variation under low COD/Sulfate ratio in Up-flow Anaerobic Sludge Blanket (UASB treating domestic wastewater

    Directory of Open Access Journals (Sweden)

    Sérvio Túlio Alves Cassini

    2012-04-01

    Full Text Available In this study, the dynamics of sulfate reduction and dissolved sulfide generation (S2-, HS-, H2Saq in liquid phase was evaluated in an UASB reactor treating domestic wastewater with low COD/Sulfate content. The evaluation in the UASB reactor was performed at three sludge heights (0.25, 1.25, 2.25 taps and effluent of the reactor. Sulfate reduction was verified in the reactor, with an average reduction of 24 % throughout the experiment period. However, the dissolved sulfide concentration in the reactor was not higher than 5.0 mg Sdiss/L. The kinetic model of first order showed good fit to describe the sulfate reduction under different COD/sulfate ratio, with K1app between 2.94x10-5 s-1 and 1.17x10-5 s-1 with correlation coefficients for data over 91%. The maximum rate to sulfate reduction was 18.0 mg SO42-/L.h-1 and small variation in COD/sulfate ratio promotes a significant change both in sulfate and sulfide concentrations.

  14. Matrix composition and community structure analysis of a novel bacterial pyrite leaching community.

    Science.gov (United States)

    Ziegler, Sibylle; Ackermann, Sonia; Majzlan, Juraj; Gescher, Johannes

    2009-09-01

    Here we describe a novel bacterial community that is embedded in a matrix of carbohydrates and bio/geochemical products of pyrite (FeS(2)) oxidation. This community grows in stalactite-like structures--snottites--on the ceiling of an abandoned pyrite mine at pH values of 2.2-2.6. The aqueous phase in the matrix contains 200 mM of sulfate and total iron concentrations of 60 mM. Micro-X-ray diffraction analysis showed that jarosite [(K,Na,H(3)O)Fe(3)(SO(4))(2)(OH)(6)] is the major mineral embedded in the snottites. X-ray absorption near-edge structure experiments revealed three different sulfur species. The major signal can be ascribed to sulfate, and the other two features may correspond to thiols and sulfoxides. Arabinose was detected as the major sugar component in the extracellular polymeric substance. Via restriction fragment length polymorphism analysis, a community was found that mainly consists of iron oxidizing Leptospirillum and Ferrovum species but also of bacteria that could be involved in dissimilatory sulfate and dissimilatory iron reduction. Each snottite can be regarded as a complex, self-contained consortium of bacterial species fuelled by the decomposition of pyrite.

  15. Pd/Sulfated Alumina: a Novel Catalyst for Selective Catalytic Reduction of NO with Methane%Pd/硫酸化氧化铝——一种新型甲烷选择还原NO催化剂

    Institute of Scientific and Technical Information of China (English)

    李宁; 王爱琴; 郑明远; 王晓东; 张涛

    2003-01-01

    Recently, much attention has been directed to the selective catalytic reduction (SCR) of NO with methane as reductant[1,2]. Pd-based catalysts have been found to be active for the reaction[3~6]. However, the performance of the Pd-based catalysts for this reaction depends strongly on the nature of the supports[3,4].

  16. Evaluation of the efficacy of a bacterial consortium for the removal of color, reduction of heavy metals, and toxicity from textile dye effluent.

    Science.gov (United States)

    Jadhav, J P; Kalyani, D C; Telke, A A; Phugare, S S; Govindwar, S P

    2010-01-01

    A microbial consortium DAS consisting three bacterial sp. originally obtained from dye contaminated sites of Solapur, India was selected because it was capable of decolorizing textile effluent and dye faster than the individual bacteria under static conditions. Identification of the isolates by 16S rRNA techniques revealed the isolates to be Pseudomonas species. The concerted metabolic activity of these isolates led to complete decolorization of textile effluent as well as Reactive Orange 16 (100 mg l(-1)) within 48-h at pH 7 and 30 degrees C. Studies involving Reactive Orange 16 (RO16) dye were carried with the bacterial consortium DAS to elucidate the mechanism of biodegradation. Induction of the laccase and reductase enzyme during RO16 decolorization indicated their role in biodegradation. The biodegradation of RO16 was monitored by using IR spectroscopy, HPLC and GC-MS analysis. Cytotoxicity, genotoxicity and phytotoxicity studies carried out before and after decolorization of the textile effluent revealed the nontoxic nature of the biotreated sample.

  17. Antifouling potential of Nature-inspired sulfated compounds

    Science.gov (United States)

    Almeida, Joana R.; Correia-da-Silva, Marta; Sousa, Emília; Antunes, Jorge; Pinto, Madalena; Vasconcelos, Vitor; Cunha, Isabel

    2017-02-01

    Natural products with a sulfated scaffold have emerged as antifouling agents with low or nontoxic effects to the environment. In this study 13 sulfated polyphenols were synthesized and tested for antifouling potential using the anti-settlement activity of mussel (Mytilus galloprovincialis) plantigrade post-larvae and bacterial growth inhibition towards four biofilm-forming bacterial strains. Results show that some of these Nature-inspired compounds were bioactive, particularly rutin persulfate (2), 3,6-bis(β-D-glucopyranosyl) xanthone persulfate (6), and gallic acid persulfate (12) against the settlement of plantigrades. The chemical precursors of sulfated compounds 2 and 12 were also tested for anti-settlement activity and it was possible to conclude that bioactivity is associated with sulfation. While compound 12 showed the most promising anti-settlement activity (EC50 = 8.95 μg.mL‑1), compound 2 also caused the higher level of growth inhibition in bacteria Vibrio harveyi (EC20 = 12.5 μg.mL‑1). All the three bioactive compounds 2, 6, and 12 were also found to be nontoxic to the non target species Artemia salina ( 1000 μg.mL‑1). This study put forward the relevance of synthesizing non-natural sulfated small molecules to generate new nontoxic antifouling agents.

  18. Bacterial Vaginosis

    Science.gov (United States)

    ... Issues > Conditions > Sexually Transmitted > Bacterial Vaginosis Health Issues Listen Español Text Size Email Print Share Bacterial Vaginosis Page Content Bacterial vaginosis (BV) is the most common vaginal infection in sexually active teenaged girls . It appears to be caused by ...

  19. Heparan sulfate biosynthesis

    DEFF Research Database (Denmark)

    Multhaupt, Hinke A B; Couchman, John R

    2012-01-01

    that the synthesis of heparan sulfate is tightly controlled. Although genomics has identified the enzymes involved in glycosaminoglycan synthesis in a number of vertebrates and invertebrates, the regulation of the process is not understood. Moreover, the localization of the various enzymes in the Golgi apparatus has...... not been carried out in a detailed way using high-resolution microscopy. We have begun this process, using well-known markers for the various Golgi compartments, coupled with the use of characterized antibodies and cDNA expression. Laser scanning confocal microscopy coupled with line scanning provides high......-quality resolution of the distribution of enzymes. The EXT2 protein, which when combined as heterodimers with EXT1 comprises the major polymerase in heparan sulfate synthesis, has been studied in depth. All the data are consistent with a cis-Golgi distribution and provide a starting point to establish whether all...

  20. Controlling barium sulfate

    Energy Technology Data Exchange (ETDEWEB)

    Greenley, R.

    Even though for several years success has been realized in controlling barium sulfate scale deposition in relatively shallow, low pressure oil wells--by squeezing an organic phosphonate scale inhibitor into the producing zone--barium sulfate scale depositon in deep, high pressure/high temperature wells usually meant an expensive workover operation. A case history of a deep (16,000 ft) well in St. Mary Parish, Louisiana, and the scale inhibitor squeeze operation are described. Based on the successful results obtained in treating this well, a generalized treating procedure for combating downhole scale deposition in high pressure/high temperature gas wells is presented. Formation squeezing with such an inhibitor represents a significant breakthrough for the oil and gas industry.

  1. Localized sulfate-reducing zones in a coastal plain aquifer

    Science.gov (United States)

    Brown, C.J.; Coates, J.D.; Schoonen, M.A.A.

    1999-01-01

    High concentrations of dissolved iron in ground water of coastal plain or alluvial aquifers contribute to the biofouling of public supply wells for which treatment and remediation is costly. Many of these aquifers, however, contain zones in which microbial sulfate reduction and the associated precipitation of iron-sulfide minerals decreases iron mobility. The principal water-bearing aquifer (Magothy Aquifer of Cretaceous age) in Suffolk County, New York, contains localized sulfate-reducing zones in and near lignite deposits, which generally are associated with clay lenses. Microbial analyses of core samples amended with [14C]-acetate indicate that microbial sulfate reduction is the predominant terminal-electron-accepting process (TEAP) in poorly permeable, lignite-rich sediments at shallow depths and near the ground water divide. The sulfate-reducing zones are characterized by abundant lignite and iron-sulfide minerals, low concentrations of Fe(III) oxyhydroxides, and by proximity to clay lenses that contain pore water with relatively high concentrations of sulfate and dissolved organic carbon. The low permeability of these zones and, hence, the long residence time of ground water within them, permit the preservation and (or) allow the formation of iron-sulfide minerals, including pyrite and marcasite. Both sulfate-reducing bacteria (SRB) and iron-reducing bacteria (IRB) are present beneath and beyond the shallow sulfate-reducing zones. A unique Fe(III)-reducing organism, MD-612, was found in core sediments from a depth of 187 m near the southern shore of Long Island. The distribution of poorly permeable, lignite-rich, sulfate-reducing zones with decreased iron concentration is varied within the principal aquifer and accounts for the observed distribution of dissolved sulfate, iron, and iron sulfides in the aquifer. Locating such zones for the placement of production wells would be difficult, however, because these zones are of limited aerial extent.

  2. Sulfation of chondroitin. Specificity, degree of sulfation, and detergent effects with 4-sulfating and 6-sulfating microsomal systems

    Energy Technology Data Exchange (ETDEWEB)

    Sugumaran, G.; Silbert, J.E.

    1988-04-05

    Microsomal preparations from chondroitin 6-sulfate-producing chick embryo epiphyseal cartilage, and from chondroitin 4-sulfate-producing mouse mastocytoma cells, were incubated with UDP-(14C)glucuronic acid and UDP-N-acetylgalactosamine to form non-sulfated proteo(14C)chondroitin. Aliquots of the incubations were then incubated with 3'-phosphoadenylylphosphosulfate (PAPS) in the presence or absence of various detergents. In the absence of detergents, there was good sulfation of this endogenous proteo(14C)chondroitin by the original microsomes from both sources. Detergents, with the exception of Triton X-100, markedly inhibited sulfation in the mast cell system but not in the chick cartilage system. These results indicate that sulfation and polymerization are closely linked on cell membranes and that in some cases this organization can be disrupted by detergents. When aliquots of the original incubation were heat inactivated, and then reincubated with new microsomes from chick cartilage and/or mouse mastocytoma cells plus PAPS, there was no significant sulfation of this exogenous proteo(14C) chondroitin with either system unless Triton X-100 was added. Sulfation of exogenous chondroitin and chondroitin hexasaccharide was compared with sulfation of endogenous and exogenous proteo(14C)chondroitin. Sulfate incorporation into hexasaccharide and chondroitin decreased as their concentrations (based on uronic acid) approached that of the proteo(14C)chondroitin. At the same time, the degree of sulfation in percent of substituted hexosamine increased. However, the degree of sulfation did not reach that of the endogenous proteo(14C)chondroitin. Hexasaccharide and chondroitin sulfation were stimulated by the presence of Triton X-100. However, in contrast to the exogenous proteo(14C)chondroitin, there was some sulfation of hexasaccharide and chondroitin in the absence of this detergent.

  3. Sulfated fucan as support for antibiotic immobilization.

    Science.gov (United States)

    Araújo, P M; Oliveira, G B; Córdula, C R; Leite, E L; Carvalho Jr, L B; Silva, M P C

    2004-03-01

    Xylofucoglucuronan from Spatoglossum schröederi algae was tested as a support for antibiotic immobilization. The polysaccharide (20 mg in 6 ml) was first activated using carbodiimide, 1-ethyl-3-(3-dimethylamino-propyl)carbodiimide methiodide (20 mg in 2 ml), under stirring for 1 h at 25 masculine C and pH from 4.5 to 5.0. After adjusting the pH to 8.0, either gentamicin or amikacin (62.5 mg in 1.25 ml) was then immobilized on this chemically modified polysaccharide with shaking for 24 h in a cold room. Infrared spectra of the activated carbodiimide xylofucoglucuronan showed two bands to carbonyl (C=O at 1647.9 and 1700.7 cm(-1)) and to amide (C-NH2) groups (1662.8 and 1714.0 cm(-1)). Microbial characterization of the derivatives was carried out by the disk diffusion method using Staphylococcus aureus or Klebsiella pneumoniae incorporated in Müller Hinton medium. Inhibition halos of bacterial growth were observed for the antibiotics immobilized on this sulfated heteropolysaccharide before and after dialysis. However, the halos resulting from the samples after dialysis were much smaller, suggesting that dialysis removed either non-covalently bound antibiotic or other small molecules. In contrast, bacterial growth was not inhibited by either xylofucoglucuronan or its activated form or by gentamicin or amikacin after dialysis. An additional experiment was carried out which demonstrated that the sulfated heteropolysaccharide was hydrolyzed by the microorganism. Therefore, the antibiotic immobilized on xylofucoglucuronan can be proposed as a controlled drug delivery system. Furthermore, this sulfated heteropolysaccharide can be extracted easily from sea algae Spatoglossum schröederi.

  4. Sulfated fucan as support for antibiotic immobilization

    Directory of Open Access Journals (Sweden)

    Araújo P.M.

    2004-01-01

    Full Text Available Xylofucoglucuronan from Spatoglossum schröederi algae was tested as a support for antibiotic immobilization. The polysaccharide (20 mg in 6 ml was first activated using carbodiimide, 1-ethyl-3-(3-dimethylamino-propylcarbodiimide methiodide (20 mg in 2 ml, under stirring for 1 h at 25ºC and pH from 4.5 to 5.0. After adjusting the pH to 8.0, either gentamicin or amikacin (62.5 mg in 1.25 ml was then immobilized on this chemically modified polysaccharide with shaking for 24 h in a cold room. Infrared spectra of the activated carbodiimide xylofucoglucuronan showed two bands to carbonyl (C = O at 1647.9 and 1700.7 cm-1 and to amide (CÝ-NH2 groups (1662.8 and 1714.0 cm-1. Microbial characterization of the derivatives was carried out by the disk diffusion method using Staphylococcus aureus or Klebsiella pneumoniae incorporated in Müller Hinton medium. Inhibition halos of bacterial growth were observed for the antibiotics immobilized on this sulfated heteropolysaccharide before and after dialysis. However, the halos resulting from the samples after dialysis were much smaller, suggesting that dialysis removed either non-covalently bound antibiotic or other small molecules. In contrast, bacterial growth was not inhibited by either xylofucoglucuronan or its activated form or by gentamicin or amikacin after dialysis. An additional experiment was carried out which demonstrated that the sulfated heteropolysaccharide was hydrolyzed by the microorganism. Therefore, the antibiotic immobilized on xylofucoglucuronan can be proposed as a controlled drug delivery system. Furthermore, this sulfated heteropolysaccharide can be extracted easily from sea algae Spatoglossum schröederi.

  5. Application of Gray Relational Analysis to the Experimental Design on Reduction of U(VI) by Sulfate-reducing Bacteria%灰色关联分析在硫酸盐还原菌还原U(Ⅵ)试验设计中的应用

    Institute of Scientific and Technical Information of China (English)

    荣丽杉; 谢水波; 凌辉; 王水云

    2011-01-01

    This paper determines the main factors in the experiment of U (VI) Reduction by sulfate-reducing bacteria (SRB) through gray correlation analysis, based on the experi- mental design. Results show that the method is simple, objective, reliable, and provides a scientific basis for experimental design to treat the wastewater containin~ ll( VIh%基于硫酸盐还原茵(SRB)还原U(Ⅵ)试验设计方案,通过灰色关联分析方法,确定在硫酸盐还原茵(SRB)还原u(Ⅵ)试验中主要的影响因素。结果表明,该方法计算简便,结果客观可靠,为含u(VI)废水处理试验设计提供了科学依据。

  6. Ambient iron concentration regulates the sulfate reducing activity in the mangrove swamps of Diwar, Goa, India

    Digital Repository Service at National Institute of Oceanography (India)

    Attria, K.; Kerkar,S.; LokaBharathi, P.A.

    enrichment and subsequently, the effect of these iron concentrations on the sulfate reduction rates. The inhibitory effects of iron (Fe +2 ) at 8.5 mM concentrations on the SRR of an anaerobic sludge reactor has been reported by Gonzalez-Silva et al...; 2002). Sulfate reduction could be suppressed due to preference for iron reduction over SRR (Thamdrup, 2000). Alternatively iron could directly inhibit SRR (Gonzalez- Silva et al., 2009). [Fig.7] In the present study, slurry experiments...

  7. Reconstruction of secular variation in seawater sulfate concentrations

    Science.gov (United States)

    Algeo, T. J.; Luo, G. M.; Song, H. Y.; Lyons, T. W.; Canfield, D. E.

    2015-04-01

    Long-term secular variation in seawater sulfate concentrations ([SO42-]SW) is of interest owing to its relationship to the oxygenation history of Earth's surface environment. In this study, we develop two complementary approaches for quantification of sulfate concentrations in ancient seawater and test their application to late Neoproterozoic (635 Ma) to Recent marine units. The "rate method" is based on two measurable parameters of paleomarine systems: (1) the S-isotope fractionation associated with microbial sulfate reduction (MSR), as proxied by Δ34SCAS-PY, and (2) the maximum rate of change in seawater sulfate, as proxied by &partial; δ 34SCAS/∂ t(max). The "MSR-trend method" is based on the empirical relationship of Δ34SCAS-PY to aqueous sulfate concentrations in 81 modern depositional systems. For a given paleomarine system, the rate method yields an estimate of maximum possible [SO42-]SW (although results are dependent on assumptions regarding the pyrite burial flux, FPY), and the MSR-trend method yields an estimate of mean [SO42-]SW. An analysis of seawater sulfate concentrations since 635 Ma suggests that [SO42-]SW was low during the late Neoproterozoic (ocean anoxia, intense MSR, and pyrite burial. The procedures developed in this study offer potential for future high-resolution quantitative analyses of paleo-seawater sulfate concentrations.

  8. Effects of sulfate streptomycin treatments on bacterial number, enzyme activities and compound transformations in simulated constructed wetlands%模拟人工湿地中硫酸盐氯霉素处理对细菌数量、湿地酶活性和生化作用的影响

    Institute of Scientific and Technical Information of China (English)

    孙雪姣; 徐婷婷; 叶海冬; 都李萍; 应杰; 章晓凝; 李鑫; 张崇邦

    2014-01-01

    霉素的不同浓度(P <0.05),而酶活性的总体变化则未能区分。结论本研究突出了细菌在人工湿地氮和有机磷转化方面的重要性,因为细菌的逐渐抑制导致了与氮和磷循环有关的酶以及生化作用的显著降低。另一方面,还发现土壤生化作用的总体变化对链霉素的浓度梯度比酶活性敏感,这一规律是否具有普遍性还需进一步验证。%Objectives]It is well known that bacteria are the most important microbial component in the constructed wetlands, since some biochemical processes are associated with bacterial communities.However, this conclusion mentioned above is obtained through a comparison of bacterial community dynamics with the specific biochemical processes or removal efficiencies of pollutants in wastewaters, thus being indirect.The direct evidences are not available till now.The current study was intended to reveal the important role of bacteria in the constructed wetlands using a selective inhibition method accepted extensively by researchers around the world, along with some analyses of bacterial number, enzyme activities and biochemical processes.[Methods]The current study was conducted using the vertical flow simulated wetlands in which were filled with three players of materials such as fine sand (diameter =1-2 mm), coarse sand (diameter 6-12 mm) and gravel (diameter 50-120 mm).Nutgrass ( Cyperu srotundus L.) was planted in the constructed wetlands.Wastewater was the effluent from a pig breeding farm, and filled into wetlands using a pulse-irrigation program, the water retention time was 7 d and the draining empty time was 0.5 d.Six treatment gradients of sulfate streptomycin were applied into the simulated wetlands (0, 1.0, 1.5, 2.0, 2.5 and 3.0 mg/kg sand) to investigate relationships between the sulfate streptomycin treatment doses and bacterial number, enzyme activities and biochemical transformations.Bacterial number was determined using a plate counting approach, enayme

  9. Molecular dissection of placental malaria protein VAR2CSA interaction with a chemo-enzymatically synthesized chondroitin sulfate library

    DEFF Research Database (Denmark)

    Sugiura, Nobuo; Clausen, Thomas Mandel; Shioiri, Tatsuasa

    2016-01-01

    that interacts with a recombinant minimal CS-binding region of VAR2CSA (rVAR2) using a CS library of various defined lengths and sulfate compositions. The CS library was chemo-enzymatically synthesized with bacterial chondroitin polymerase and recombinant CS sulfotransferases. We found that C-4 sulfation...

  10. Sulfation pattern of fucose branches affects the anti-hyperlipidemic activities of fucosylated chondroitin sulfate.

    Science.gov (United States)

    Wu, Nian; Zhang, Yu; Ye, Xingqian; Hu, Yaqin; Ding, Tian; Chen, Shiguo

    2016-08-20

    Fucosylated chondroitin sulfates (fCSs) are glycosaminoglycans extracted from sea cucumbers, consisting of chondroitin sulfate E (CSE) backbones and sulfated fucose branches. The biological properties of fCSs could be affected by the sulfation pattern of their fucose branches. In the present study, two fCSs were isolated from sea cucumbers Isostichopus badionotus (fCS-Ib) and Pearsonothuria graeffei (fCS-Pg). Their monosaccharide compositions of glucuronic acid (GlcA), N-acetylgalactosamine (GalNAc), fucose (Fuc) and sulfate were at similar molar ratio with 1.0/0.7/0.9/3.1 for fCS-Ib and 1.0/0.8/1.5/2.6 for fCS-Pg. The two fCSs have different sulfation patterns on their fucose branches, fCS-Pg with 3,4-O-disulfation while fCS-Ib with 2,4-O-disulfation. Their antihyperlipidemic effects were compared using a high-fat high-fructose diet (HFFD)-fed C57BL/6J mice model. Both fCS-Ib and fCS-Pg had significant effects on lipid profile improvement, liver protection, blood glucose diminution and hepatic glycogen synthesis. Specifically, fCS-Pg with 3,4-O-disulfation fucose branches was more effective in reduction of blood cholesterol (TC), low density lipoprotein (LDL) and atherogenic index (AI). Our results indicate that both fCSs, especially fCS-Pg, could be used as a potential anti-hyperlipidemic drug.

  11. 混合硫酸盐还原菌群还原Cr(Ⅵ)的初步研究%Primary Study on Reduction of Cr( Ⅵ )by Mixed Sulfate-Reducing Bacteria

    Institute of Scientific and Technical Information of China (English)

    李光; 方晓兰; 蔡志辉

    2011-01-01

    In this paper, the mixed sulfate-reducing bacteria(SRB) were used to treat the wastewater containing Cr(Ⅵ). The effects of pH value and cultural temperature on removal rate of Cr(Ⅵ) were investigated. The results showed that the removal rate of Cr(Ⅵ) reached 97. 6% with Cr(Ⅵ) concentration of 50 mg · L-1, pH value of 7. 0, cultural temperature of 36 °C , cultural time of 36 h. The mixed SRB expected to play an important role in treating high concentrations of wastewater containing Cr(Ⅵ) because of its wider range of pH value and temperature, high efficiency, stable performance.%利用驯化后的耐受Cr(Ⅵ)的混合硫酸盐还原菌群处理含Cr(Ⅵ)废水,探讨了pH值、培养温度等对Cr(Ⅵ)去除率的影响。结果表明,当Cr(Ⅵ)浓度为50 mg·L-1、pH值为7.0、培养温度为36℃、培养时间为36 h时,该混合菌群对Cr(Ⅵ)的去除率达到最高,为97.6%。该混合菌群能适应较宽的pH值和温度范围且处理效率高、性能稳定,有望成为处理高浓度含Cr(Ⅵ)废水的理想方法。

  12. Use of calcium sulfate to accelerate densification while reducing greenhouse gas (GHG) emissions from oil sands tailings ponds

    Energy Technology Data Exchange (ETDEWEB)

    Bordenave, S.; Ramos, E.; Lin, S.; Voordouw, G.; Gieg, L. [Calgary Univ., AB (Canada). Petroleum Microbiology Research Group; Guo, C.; Wells, S. [Suncor Energy, Calgary, AB (Canada)

    2009-07-01

    Oil sands tailings ponds contain high volumes of fine tailings. Accelerated densification of the tailings can be achieved by adding calcium sulfate, and microbial activity has also been known to increase the tailings densification process. The presence of calcium sulfate can divert microbial activity from the production of methane. This study characterized the microbial processes in a tailings pond in order to estimate their contribution to tailings densification and greenhouse gas (GHG) emissions reductions. Sulfate and sulfide concentrations were measured. Rates of microbial sulfate reduction and methanogenesis were measured as a function of depth in a pond treated with calcium sulfate. Samples were collected at various depths from a tailings pond in northern Alberta. The study showed that the highest rates of methanogenesis occurred in areas where sulfate reduction rates were low. Fluctuating rates of sulfate reduction demonstrated that different microbial activities occurred at discrete levels in the pond. The study suggested that sulfide formed by the reduction of sulfate at depth is carried upwards in gas bubbles and then oxidized back into sulfate in the upper oxygenated layers of the pond. It was concluded that when used as a consolidation agent, calcium sulfate reduces GHG emissions from tailings ponds. 13 refs., 3 figs.

  13. [Diagnosis of bacterial vaginosis].

    Science.gov (United States)

    Djukić, Slobodanka; Ćirković, Ivana; Arsić, Biljana; Garalejić, Eliana

    2013-01-01

    Bacterial vaginosis is a common, complex clinical syndrome characterized by alterations in the normal vaginal flora. When symptomatic, it is associated with a malodorous vaginal discharge and on occasion vaginal burning or itching. Under normal conditions, lactobacilli constitute 95% of the bacteria in the vagina. Bacterial vaginosis is associated with severe reduction or absence of the normal H2O2-producing lactobacilli and overgrowth of anaerobic bacteria and Gardnerella vaginalis, Atopobium vaginae, Mycoplasma hominis and Mobiluncus species. Most types of infectious disease are diagnosed by culture, by isolating an antigen or RNA/DNA from the microbe, or by serodiagnosis to determine the presence of antibodies to the microbe. Therefore, demonstration of the presence of an infectious agent is often a necessary criterion for the diagnosis of the disease. This is not the case for bacterial vaginosis, since the ultimate cause of the disease is not yet known. There are a variety of methods for the diagnosis of bacterial vaginosis but no method can at present be regarded as the best. Diagnosing bacterial vaginosis has long been based on the clinical criteria of Amsel, whereby three of four defined criteria must be satisfied. Nugent's scoring system has been further developed and includes validation of the categories of observable bacteria structures. Up-to-date molecular tests are introduced, and better understanding of vaginal microbiome, a clear definition for bacterial vaginosis, and short-term and long-term fluctuations in vaginal microflora will help to better define molecular tests within the broader clinical context.

  14. Identification of the proton pathway in bacterial reaction centers: Both protons associated with reduction of QB to QBH2 share a common entry point

    Science.gov (United States)

    Ädelroth, Pia; Paddock, Mark L.; Sagle, Laura B.; Feher, George; Okamura, Melvin Y.

    2000-01-01

    The reaction center from Rhodobacter sphaeroides uses light energy for the reduction and protonation of a quinone molecule, QB. This process involves the transfer of two protons from the aqueous solution to the protein-bound QB molecule. The second proton, H+(2), is supplied to QB by Glu-L212, an internal residue protonated in response to formation of QA− and QB−. In this work, the pathway for H+(2) to Glu-L212 was studied by measuring the effects of divalent metal ion binding on the protonation of Glu-L212, which was assayed by two types of processes. One was proton uptake from solution after the one-electron reduction of QA (DQA→D+QA−) and QB (DQB→D+QB−), studied by using pH-sensitive dyes. The other was the electron transfer kAB(1) (QA−QB→QAQB−). At pH 8.5, binding of Zn2+, Cd2+, or Ni2+ reduced the rates of proton uptake upon QA− and QB− formation as well as kAB(1) by ≈an order of magnitude, resulting in similar final values, indicating that there is a common rate-limiting step. Because D+QA− is formed 105-fold faster than the induced proton uptake, the observed rate decrease must be caused by an inhibition of the proton transfer. The Glu-L212→Gln mutant reaction centers displayed greatly reduced amplitudes of proton uptake and exhibited no changes in rates of proton uptake or electron transfer upon Zn2+ binding. Therefore, metal binding specifically decreased the rate of proton transfer to Glu-L212, because the observed rates were decreased only when proton uptake by Glu-L212 was required. The entry point for the second proton H+(2) was thus identified to be the same as for the first proton H+(1), close to the metal binding region Asp-H124, His-H126, and His-H128. PMID:11078513

  15. Metagenomic and functional analyses of the consequences of reduction of bacterial diversity on soil functions and bioremediation in diesel-contaminated microcosms.

    Science.gov (United States)

    Jung, Jaejoon; Philippot, Laurent; Park, Woojun

    2016-03-14

    The relationship between microbial biodiversity and soil function is an important issue in ecology, yet most studies have been performed in pristine ecosystems. Here, we assess the role of microbial diversity in ecological function and remediation strategies in diesel-contaminated soils. Soil microbial diversity was manipulated using a removal by dilution approach and microbial functions were determined using both metagenomic analyses and enzymatic assays. A shift from Proteobacteria- to Actinobacteria-dominant communities was observed when species diversity was reduced. Metagenomic analysis showed that a large proportion of functional gene categories were significantly altered by the reduction in biodiversity. The abundance of genes related to the nitrogen cycle was significantly reduced in the low-diversity community, impairing denitrification. In contrast, the efficiency of diesel biodegradation was increased in the low-diversity community and was further enhanced by addition of red clay as a stimulating agent. Our results suggest that the relationship between microbial diversity and ecological function involves trade-offs among ecological processes, and should not be generalized as a positive, neutral, or negative relationship.

  16. Performance of sulfate-dependent anaerobic ammonium oxidation

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    The performance of sulfate-dependent anaerobic ammonium oxidation was studied.The results showed that both SO42-and NH4+ were chemically stable under anaerobic conditions.They did not react with each other in the absence of biological catalyst(sludge).The anaerobic digested sludge cultivated in an anaerobic reactor for three years took on the ability of oxidizing ammonium with sulfate anaero-bically.The average reduction of sulfate and ammonium was 71.67 mg.L-1 and 56.82 mg.L-1 at high concentrations.The reaction between SO42-and NH4+ was difficult,though feasible,due to its low standard Gibbs free energy change.The experiment demonstrated that high substrate concentrations and low oxidation-reduction potential(ORP) may be favourable for the biological reaction.

  17. Performance of sulfate-dependent anaerobic ammo-nium oxidation

    Institute of Scientific and Technical Information of China (English)

    ZHANG Lei; ZHENG Ping; HE YuHui; JIN RenCun

    2009-01-01

    The performance of sulfate-dependent anaerobic ammonium oxidation was studied. The results showed that both SO42- and NH4+ were chemically stable under anaerobic conditions. They did not react with each other in the absence of biological catalyst (sludge). The anaerobic digested sludge cultivated in an anaerobic reactor for three years took on the ability of oxidizing ammonium with sulfate anaero-bically. The average reduction of sulfate and ammonium was 71.67 mg.L-1 and 56.82 mg.L-1 at high concentrations.The reaction between SO42- and NH4+ was difficult, though feasible, due to its low standard Gibbs free energy change. The experiment demonstrated that high substrate concentrations and low oxidation-reduction potential (ORP) may be favourable for the biological reaction.

  18. Isotopic composition of sulfate accumulations, Northern Calcareous Alps, Austria

    Science.gov (United States)

    Bojar, Ana-Voica; Halas, Stanislaw; Bojar, Hans-Peter; Trembaczowski, Andrzej

    2015-04-01

    isotopic compositon of 14 sulfides as galena, sphalerite, pyrite and native sulfure were determined as well, with values ranging between -17.5 and 2.8 ‰ (CDT). For the investigated sulfates, the sulfur isotopic values show generally low values, which are characteristic for the late Permian. The broad distribution of sulfide values point toward bacterial reduction, fact also reflected by some higher isotopic values of sulfates. The oxygen values show a larger scatter from 9 to 23‰, which is even larger than that found for the Zechstein anhydrites of northern Germany, north-eastern Italian Alps or western Poland. The associated carbonates, as calcite, dolomite and magnesite are in disequilibrium with the sulfates indicating rather primary marine isotopic signature than re-equlibration with the sulfates at higher temperatures. References Leitner, C., Neubauer, F., Genser, J., Borojevic-Sostaric, B., Rantitsch, G., 2013. 40Ar/39Ar ages of recrystallization of rock-forming polyhalite in Alpine rocksalt deposits. In Jordan, F., Mark, D.F., Verati C. (eds.) Advances in 40Ar/39Ar Dating: from Archaeology to Planetary Sciences. Geological Society, London, Special Publications, 378, 207-244. Kirchner, E., 1987: Die Mineral- und Gesteinsvorkommen in den Gipslagerstätten der Lammermasse, innerhalb der Hallstattzone, Salzburg. Jahrbuch Haus der Natur. 10, 156-167. Postl, W., 1990. Enargit und Parnauit aus dem Gips- und Anhydritbergbau Tragöß-Oberort, Steiermark. In: Niedermayr, G. et al. (1990): Neue Mineralfunde aus Österreich XXXIX. Carinthia II, 180/100, 277. Tollmann, A., 1977. Geologie von Österreich. Band 1. Die Zentralalpen. Deuticke, Wien, 766 pp.

  19. Interaction of PACls with sulfate

    Institute of Scientific and Technical Information of China (English)

    XU Yi; WANG Dong-Sheng; TANG Hong-Xiao

    2004-01-01

    This article discusses the influential factors on Al13 separation considering the interaction of sulfate with various polyaluminum chloride(PACl). The experimental results showed that the basicity(B=[OH]/[Al]), the concentration of PACl and Al/SO4 ratio exhibited significant roles in the PACl-sulfate reaction. It indicated that different species in various PACl underwent different reaction pathway with sulfate. The Alc, colloidal species, formed precipitation quickly with sulfate, while Alb, oligomers and polymers, undergoes slow crystallization. And Ala, monomers, reacts with sulfate to form soluble complexes. The kinetic difference of reaction made it possible to realize the separation of Alb and further purification. The decrease of Ala resulted in the limit of ferron method was also mentioned.

  20. Kinetic Analysis and Applications to Thermochemicai Sulfate Reduction of Methane: Taking Puguang Gas Reservoirs as an Example%甲烷热化学硫酸盐还原反应动力学分析及其应用:以普光气藏为例

    Institute of Scientific and Technical Information of China (English)

    王强; 徐立恒; 赵文光; 杨博

    2012-01-01

    Thermochemical sulfate reduction (TSR) has modified the role of the gas reservoir. Selecting kinetics model on the basis of the high pressure thermal simulation experiment, we have obtained the dynamic parameters and reproduced rock reaction of methane with sulfate in the geological conditions by considering the burial and thermal evolution history of the Puguang area. It is concluded in this study that TSR of CH4 of Feixianguan Formations began from 130 Ma, at palco 210 ℃ and terminated 30 Ma ago; The cumulative amount of methane consumed by the TSR only amounted to 2. 4%, which indicates that Feixianguan TSR in the late lost less methane without affecting the later storage of methane. So, it is of exploration significance for deep carbonate reservoirs.%热化学硫酸盐还原反应(TSR)对气藏有改造作用.以高压釜模拟实验为基础,选取甲烷与硫酸钙反应的动力学模型求取动力学参数,并结合普光地区的热史和埋藏史再现地质条件下甲烷与硫酸盐岩的反应过程,得出在距今130 Ma(早白垩世)的飞仙关组甲烷发生了硫酸盐还原反应,反应起始温度210℃,持续至30Ma前反应终止;TSP的累积消耗甲烷量仅2.4%,说明在飞仙关组TSR对甲烷的后期损耗较少,因此并不影响甲烷的后期保存,这对于较深的碳酸盐岩储层依然具有勘探意义.

  1. H2O2-Promoted Size Growth of Sulfated TiO2 Nanocrystals

    Institute of Scientific and Technical Information of China (English)

    YAN You-Jun; QIU Xiao-Qing; WANG Hui; LI Li-Ping; LI Guang-She

    2008-01-01

    Anatase nanoparticles modified by sulfate groups were synthesized using hydrother- mal method. The particles were controlled to large sizes by simply adjusting the amount of H2O2, in which HOO- ions replaced the surface sulfate groups and reduced the steric effect to promote the grain growth. The size-induced microstructural changes of the as-prepared nanoparticles were characterized using powder XRD, FT-IR, TG, and UV-vis analyses. The sulfate groups existed on anatase surface in unidentate and bidentate coordination forms. With the particle size reduction, bandgap energies of the as-prepared anatase nanoparticles decreased, and the desorption temperature of sulfate groups shifted towards lower temperatures.

  2. Community size and metabolic rates of psychrophilic sulfate-reducing bacteria in Arctic marine sediments

    DEFF Research Database (Denmark)

    Knoblauch, C.; Jørgensen, BB; Harder, J.

    1999-01-01

    The numbers of sulfate reducers in two Arctic sediments within situ temperatures of 2.6 and -1.7 degrees C were determined. Most-probable-number counts were higher at 10 degrees C than at 20 degrees C, indicating the predominance of a psychrophilic community. Mean specific sulfate reduction rates...... of 19 isolated psychrophiles were compared to corresponding rates of 9 marine, mesophilic sulfate-reducing bacteria. The results indicate that, as a physiological adaptation to the permanently cold Arctic environment, psychrophilic sulfate reducers have considerably higher specific metabolic rates than...

  3. Community size and metabolic rates of psychrophilic sulfate-reducing bacteria in Arctic marine sediments

    Energy Technology Data Exchange (ETDEWEB)

    Knoblauch, C.; Joergensen, B.B.; Harder, J.

    1999-09-01

    The numbers of sulfate reducers in two Arctic sediments with in situ temperatures of 2.6 and {minus}1.7C were determined. Most-probable-number counts were higher at 10 C than at 20 C, indicating the predominance of a psychrophilic community. Mean specific sulfate reduction rates of 19 isolated psychrophiles were compared to corresponding rates of 9 marine, mesophilic sulfate-reducing bacteria. The results indicate that, as a physiological adaptation to the permanently cold Arctic environment, psychrophilic sulfate reducers have considerably higher specific metabolic rates than their mesophilic counterparts at similarly low temperatures.

  4. Rationally designed fluorescently labeled sulfate-binding protein mutants: evaluation in the development of a sensing system for sulfate

    Science.gov (United States)

    Shrestha, Suresh; Salins, Lyndon L E.; Mark Ensor, C.; Daunert, Sylvia

    2002-01-01

    Periplasmic binding proteins from E. coli undergo large conformational changes upon binding their respective ligands. By attaching a fluorescent probe at rationally selected unique sites on the protein, these conformational changes in the protein can be monitored by measuring the changes in fluorescence intensity of the probe which allow the development of reagentless sensing systems for their corresponding ligands. In this work, we evaluated several sites on bacterial periplasmic sulfate-binding protein (SBP) for attachment of a fluorescent probe and rationally designed a reagentless sensing system for sulfate. Eight different mutants of SBP were prepared by employing the polymerase chain reaction (PCR) to introduce a unique cysteine residue at a specific location on the protein. The sites Gly55, Ser90, Ser129, Ala140, Leu145, Ser171, Val181, and Gly186 were chosen for mutagenesis by studying the three-dimensional X-ray crystal structure of SBP. An environment-sensitive fluorescent probe (MDCC) was then attached site-specifically to the protein through the sulfhydryl group of the unique cysteine residue introduced. Each fluorescent probe-conjugated SBP mutant was characterized in terms of its fluorescence properties and Ser171 was determined to be the best site for the attachment of the fluorescent probe that would allow for the development of a reagentless sensing system for sulfate. Three different environment-sensitive fluorescent probes (1,5-IAEDANS, MDCC, and acylodan) were studied with the SBP171 mutant protein. A calibration curve for sulfate was constructed using the labeled protein and relating the change in the fluorescence intensity with the amount of sulfate present in the sample. The detection limit for sulfate was found to be in the submicromolar range using this system. The selectivity of the sensing system was demonstrated by evaluating its response to other anions. A fast and selective sensing system with detection limits for sulfate in the

  5. Nickel, manganese and copper removal by a mixed consortium of sulfate reducing bacteria at a high COD/sulfate ratio.

    Science.gov (United States)

    Barbosa, L P; Costa, P F; Bertolino, S M; Silva, J C C; Guerra-Sá, R; Leão, V A; Teixeira, M C

    2014-08-01

    The use of sulfate-reducing bacteria (SRB) in passive treatments of acidic effluents containing heavy metals has become an attractive alternative biotechnology. Treatment efficiency may be linked with the effluent conditions (pH and metal concentration) and also to the amount and nature of the organic substrate. Variations on organic substrate and sulfate ratios clearly interfere with the biological removal of this ion by mixed cultures of SRB. This study aimed to cultivate a mixed culture of SRB using different lactate concentrations at pH 7.0 in the presence of Ni, Mn and Cu. The highest sulfate removal efficiency obtained was 98 %, at a COD/sulfate ratio of 2.0. The organic acid analyses indicated an acetate accumulation as a consequence of lactate degradation. Different concentrations of metals were added to the system at neutral pH conditions. Cell proliferation and sulfate consumption in the presence of nickel (4, 20 and 50 mg l(-1)), manganese (1.5, 10 and 25 mg l(-1)) and copper (1.5, 10 and 25 mg l(-1)) were measured. The presence of metals interfered in the sulfate biological removal however the concentration of sulfide produced was high enough to remove over 90 % of the metals in the environment. The molecular characterization of the bacterial consortium based on dsrB gene sequencing indicated the presence of Desulfovibrio desulfuricans, Desulfomonas pigra and Desulfobulbus sp. The results here presented indicate that this SRB culture may be employed for mine effluent bioremediation due to its potential for removing sulfate and metals, simultaneously.

  6. Bacterial gastroenteritis

    Science.gov (United States)

    Bacterial gastroenteritis is present when bacteria cause an infection of the stomach and intestines ... has not been treated Many different types of bacteria can cause ... Campylobacter jejuni E coli Salmonella Shigella Staphylococcus ...

  7. Papillomavirus microbicidal activities of high-molecular-weight cellulose sulfate, dextran sulfate, and polystyrene sulfonate.

    Science.gov (United States)

    Christensen, N D; Reed, C A; Culp, T D; Hermonat, P L; Howett, M K; Anderson, R A; Zaneveld, L J

    2001-12-01

    The high-molecular-weight sulfated or sulfonated polysaccharides or polymers cellulose sulfate, dextran sulfate, and polystyrene sulfonate were tested for microbicidal activity against bovine papillomavirus type 1 (BPV-1) and human papillomavirus type 11 (HPV-11) and type 40 (HPV-40). In vitro assays included the BPV-1-induced focus-forming assay and transient infection of human A431 cells with HPVs. The compounds were tested for microbicidal activity directly by preincubation with virus prior to addition to cell cultures and indirectly by addition of virus to compound-treated cells and to virus-coated cells to test inactivation of the virus after virus-cell binding. The data indicated that all three compounds showed direct microbicidal activity with 50% effective concentrations between 10 to 100 microg/ml. These concentrations were nontoxic to cell cultures for both assays. When a clone of C127 cells was tested for microbicidal activity, approximately 10-fold-less compound was required to achieve a 50% reduction in BPV-1-induced foci than for the uncloned parental C127 cells. Pretreatment of cells with compound prior to addition of virus also demonstrated strong microbicidal activity with dextran sulfate and polystyrene sulfonate, but cellulose sulfate required several orders of magnitude more compound for virus inactivation. Polystyrene sulfonate prevented subsequent infection of HPV-11 after virus-cell binding, and this inactivation was observed up to 4 h after addition of virus. These data indicate that the polysulfated and polysulfonated compounds may be useful nontoxic microbicidal compounds that are active against a variety of sexually transmitted disease agents including papillomaviruses.

  8. Sulfate transport in toad skin

    DEFF Research Database (Denmark)

    Larsen, Erik Hviid; Simonsen, K

    1988-01-01

    1. In short-circuited toad skin preparations exposed bilaterally to NaCl-Ringer's containing 1 mM SO2(-4), influx of sulfate was larger than efflux showing that the skin is capable of transporting sulfate actively in an inward direction. 2. This active transport was not abolished by substituting...... apical Na+ for K+. 3. Following voltage activation of the passive Cl- permeability of the mitochondria-rich (m.r.) cells sulfate flux-ratio increased to a value predicted from the Ussing flux-ratio equation for a monovalent anion. 4. In such skins, which were shown to exhibit vanishingly small leakage...

  9. 不同硫酸盐引发的热化学还原作用对原油裂解气生成的影响%Effects of thermochemical reduction initiated by different sulfates on the generation of oil cracking gas

    Institute of Scientific and Technical Information of China (English)

    何坤; 张水昌; 米敬奎; 毛榕; 帅燕华; 毕丽娜

    2013-01-01

    由于反应途径或机制不同于裂解反应,硫酸盐热化学还原作用(TSR)很可能会改变油藏中原油的热稳定性和裂解气产量.为了阐明TSR作用对原油裂解气生成的影响,利用黄金管热模拟装置开展了一系列不同硫酸盐和原油的升温热解实验.非烃气体,包括H2S的大量生成表明,石膏和硫酸镁的加入引发了原油的TSR反应,其中,石膏参与的TSR作用对烃类气体的产量和生成活化能无明显影响;相对而言,硫酸镁参与的TSR反应引起了最终甲烷产量约13.1%的降低和大分子气态烃(C2+)稳定性的明显降低;氯化镁的加入导致了硫酸镁体系中H2S产量进一步的增加和烃类气体产量进一步的降低.可以证实,在硫酸镁热解体系中,C2+与活性结构HSO4发生了氧化还原反应,这也是导致烃类气体产量降低的重要原因.因此,TSR作用对裂解气生成的影响很大程度上受控于地层水中的硫酸盐类型和活性结构的浓度.%Thermochemical sulfate reduction (TSR) might alter the stability of oils and the yield of cracked gas in reservoirs because its reaction pathway or mechanism differs from that of oil cracking.In order to ascertain the effect of TSR on the generation of cracked gas from oils,we performed a series of non-isothermal pyrolysis experiments involving different sulfates and an oil (QB3) with a gold-tube system.The generation of considerable amounts of non-hydrocarbon gases (including H2S) indicates that TSR is initiated by the presence of gypsum and magnesium sulfate (MgSO4).Comparatively,the yield and generation activation energy of gaseous hydrocarbons are not obviously affected by TSR involving gypsum.Whereas TSR involving MgSO4 leads to about 13.1% decrease in the methane yield and also a remarkable decrease in the stability of C2+,and the addition of MgCl2 to the MgSO4 system results in a further increase in the H2S yield but a further decrease in the hydrocarbon gas yield

  10. Low-intensity electromagnetic irradiation of 70.6 and 73 GHz frequencies enhances the effects of disulfide bonds reducer on Escherichia coli growth and affects the bacterial surface oxidation-reduction state.

    Science.gov (United States)

    Torgomyan, Heghine; Trchounian, Armen

    2011-10-14

    Low-intensity electromagnetic irradiation (EMI) of 70.6 and 73 GHz frequencies (flux capacity - 0.06 mW cm(-2)) had bactericidal effects on Escherichia coli. This EMI (1h) exposure suppressed the growth of E. coli K-12(λ). The pH value (6.0-8.0) did not significantly affect the growth. The lag-phase duration was prolonged, and the growth specific rate was inhibited, and these effects were more noticeable after 73 GHz irradiation. These effects were enhanced by the addition of DL-dithiothreitol (DTT), a strong reducer of disulfide bonds in surface membrane proteins, which in its turn also has bactericidal effect. Further, the number of accessible SH-groups in membrane vesicles was markedly decreased by EMI that was augmented by N,N'-dicyclohexycarbodiimide and DTT. These results indicate a change in the oxidation-reduction state of bacterial cell membrane proteins that could be the primary membranous mechanism in the bactericidal effects of low-intensity EMI of the 70.6 and 73 GHz frequencies.

  11. p-Cresyl Sulfate

    Directory of Open Access Journals (Sweden)

    Tessa Gryp

    2017-01-01

    Full Text Available If chronic kidney disease (CKD is associated with an impairment of kidney function, several uremic solutes are retained. Some of these exert toxic effects, which are called uremic toxins. p-Cresyl sulfate (pCS is a prototype protein-bound uremic toxin to which many biological and biochemical (toxic effects have been attributed. In addition, increased levels of pCS have been associated with worsening outcomes in CKD patients. pCS finds its origin in the intestine where gut bacteria metabolize aromatic amino acids, such as tyrosine and phenylalanine, leading to phenolic end products, of which pCS is one of the components. In this review we summarize the biological effects of pCS and its metabolic origin in the intestine. It appears that, according to in vitro studies, the intestinal bacteria generating phenolic compounds mainly belong to the families Bacteroidaceae, Bifidobacteriaceae, Clostridiaceae, Enterobacteriaceae, Enterococcaceae, Eubacteriaceae, Fusobacteriaceae, Lachnospiraceae, Lactobacillaceae, Porphyromonadaceae, Staphylococcaceae, Ruminococcaceae, and Veillonellaceae. Since pCS remains difficult to remove by dialysis, the gut microbiota could be a future target to decrease pCS levels and its toxicity, even at earlier stages of CKD, aiming at slowing down the progression of the disease and decreasing the cardiovascular burden.

  12. p-Cresyl Sulfate

    Science.gov (United States)

    Gryp, Tessa; Vanholder, Raymond; Vaneechoutte, Mario; Glorieux, Griet

    2017-01-01

    If chronic kidney disease (CKD) is associated with an impairment of kidney function, several uremic solutes are retained. Some of these exert toxic effects, which are called uremic toxins. p-Cresyl sulfate (pCS) is a prototype protein-bound uremic toxin to which many biological and biochemical (toxic) effects have been attributed. In addition, increased levels of pCS have been associated with worsening outcomes in CKD patients. pCS finds its origin in the intestine where gut bacteria metabolize aromatic amino acids, such as tyrosine and phenylalanine, leading to phenolic end products, of which pCS is one of the components. In this review we summarize the biological effects of pCS and its metabolic origin in the intestine. It appears that, according to in vitro studies, the intestinal bacteria generating phenolic compounds mainly belong to the families Bacteroidaceae, Bifidobacteriaceae, Clostridiaceae, Enterobacteriaceae, Enterococcaceae, Eubacteriaceae, Fusobacteriaceae, Lachnospiraceae, Lactobacillaceae, Porphyromonadaceae, Staphylococcaceae, Ruminococcaceae, and Veillonellaceae. Since pCS remains difficult to remove by dialysis, the gut microbiota could be a future target to decrease pCS levels and its toxicity, even at earlier stages of CKD, aiming at slowing down the progression of the disease and decreasing the cardiovascular burden. PMID:28146081

  13. Impact of sulfate pollution on anaerobic biogeochemical cycles in a wetland sediment.

    Science.gov (United States)

    Baldwin, Darren S; Mitchell, Alison

    2012-03-15

    The impact of sulfate pollution is increasingly being seen as an issue in the management of inland aquatic ecosystems. In this study we use sediment slurry experiments to explore the addition of sulfate, with or without added carbon, on the anaerobic biogeochemical cycles in a wetland sediment that previously had not been exposed to high levels of sulfate. Specifically we looked at the cycling of S (sulfate, dissolved and particulate sulfide--the latter measured as acid volatile sulfide; AVS), C (carbon dioxide, bicarbonate, methane and the short chain volatile fatty acids formate, acetate, butyrate and propionate), N (dinitrogen, ammonium, nitrate and nitrite) and redox active metals (Fe(II) and Mn(II)). Sulfate had the largest effects on the cycling of S and C. All the added S at lower loadings were converted to AVS over the course of the experiment (30 days). At the highest loading (8 mmol) less than 50% of consumed S was converted to AVS, however this is believed to be a kinetic effect. Although sulfate reduction was occurring in sediments with added sulfate, dissolved sulfide concentrations remained low throughout the study. Sulfate addition affected methanogenesis. In the absence of added carbon, addition of sulfate, even at a loading of 1 mmol, resulted in a halving of methane formation. The initial rate of formation of methane was not affected by sulfate if additional carbon was added to the sediment. However, there was evidence for anaerobic methane oxidation in those sediments with added sulfate and carbon, but not in those sediments treated only with carbon. Surprisingly, sulfate addition had little apparent impact on N dynamics; previous studies have shown that sulfide can inhibit denitrification and stimulate dissimilatory nitrate reduction to ammonia. We propose that because most of the reduced sulfur was in particulate form, levels of dissolved sulfide were too low to interfere with the N cycle.

  14. Biological sulfate removal from construction and demolition debris leachate: Effect of bioreactor configuration

    Energy Technology Data Exchange (ETDEWEB)

    Kijjanapanich, Pimluck, E-mail: som_cheng00@hotmail.com [Pollution Prevention and Resource Recovery Chair Group, UNESCO-IHE Institute for Water Education, Westvest 7, 2611 AX Delft (Netherlands); Do, Anh Tien [Civil and Environmental Engineering, University of South Florida, Tampa, FL 33620 (United States); Annachhatre, Ajit P. [Environmental Engineering and Management, Asian Institute of Technology, PO Box 4, Klongluang, Pathumthani 12120 (Thailand); Esposito, Giovanni [Department of Civil and Mechanical Engineering, University of Cassino and Southern Lazio, Via Di Biasio 43, 03043 Cassino (Italy); Yeh, Daniel H. [Civil and Environmental Engineering, University of South Florida, Tampa, FL 33620 (United States); Lens, Piet N.L. [Pollution Prevention and Resource Recovery Chair Group, UNESCO-IHE Institute for Water Education, Westvest 7, 2611 AX Delft (Netherlands)

    2014-03-01

    Highlights: • Novel biological technique for gypsum removal from CDD. • CDDS leachate treatment performed using different sulfate reducing bioreactors. • Gypsum in CDD can be used as a source of sulfate for sulfate reducing bacteria. • High calcium concentration (1000 mg L{sup −1}) did not affect the bioreactor performance. - Abstract: Due to the contamination of construction and demolition debris (CDD) by gypsum drywall, especially, its sand fraction (CDD sand, CDDS), the sulfate content in CDDS exceeds the posed limit of the maximum amount of sulfate present in building sand (1.73 g sulfate per kg of sand for the Netherlands). Therefore, the CDDS cannot be reused for construction. The CDDS has to be washed in order to remove most of the impurities and to obtain the right sulfate content, thus generating a leachate, containing high sulfate and calcium concentrations. This study aimed at developing a biological sulfate reduction system for CDDS leachate treatment and compared three different reactor configurations for the sulfate reduction step: the upflow anaerobic sludge blanket (UASB) reactor, inverse fluidized bed (IFB) reactor and gas lift anaerobic membrane bioreactor (GL-AnMBR). This investigation demonstrated that all three systems can be applied for the treatment of CDDS leachate. The highest sulfate removal efficiency of 75–85% was achieved at a hydraulic retention time (HRT) of 15.5 h. A high calcium concentration up to 1000 mg L{sup −1} did not give any adverse effect on the sulfate removal efficiency of the IFB and GL-AnMBR systems.

  15. Super-heavy pyrite (δ34Spyr > δ34SCAS) in the terminal Proterozoic Nama Group, Southern Namibia: Implications for atmospheric oxygen and seawater sulfate at the dawn of animal life

    Science.gov (United States)

    Ries, J. B.; Fike, D. A.; Pratt, L.; Lyons, T. W.; Grotzinger, J. P.

    2009-12-01

    Sulfur isotope analysis (δ34S) of well-preserved carbonates spanning a ca. 10 Myr interval of the terminal Proterozoic Nama Group in Namibia, southwestern Africa, reveals that pyrite is consistently enriched in 34S relative to coeval seawater sulfate as preserved in carbonate associated sulfate (CAS). This observation is not consistent with the current paradigm for interpreting the geologic record of sulfur isotopes, which assumes that pyrite δ34S (δ34Spyr) will be equal to or less than co-occurring CAS δ34S (δ34SCAS) due to the kinetic isotope effect of bacterial sulfate reduction (BSR) that favors the lighter isotope of sulfur (32S) during sulfur-oxygen bond-breakage. Although the precise mechanism of pyrite enrichment is debatable, our combined observations of extremely enriched pyrite, low concentrations of CAS and pyrite, and high frequency fluctuations in δ34SCAS and δ34Spyr throughout the Nama Group carbonates point to very low concentrations of sulfate in portions of the terminal Proterozoic ocean. The additional occurrence of 34S-enriched pyrite in contemporaneous terminal Proterozoic sections from Poland and Canada reveal that low seawater sulfate may have been widespread in the oceans at this time. However, the absence of such extremely 34S-enriched pyrites from well-preserved, coeval carbonate sections in Oman suggests that such conditions were not globally uniform. Low, geographically varied concentrations of marine sulfate in terminal Proterozoic time are consistent with elevated and geographically varied concentrations of reactive, non-pyritized iron in marine shales recently reported for this interval, suggesting that high dissolved Fe(II)/low O2 conditions persisted in a range of marine facies as late as 543 Ma - tens of millions of years after the origin of animals yet prior to their major diversification in Early Cambrian time.

  16. 21 CFR 558.364 - Neomycin sulfate.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 6 2010-04-01 2010-04-01 false Neomycin sulfate. 558.364 Section 558.364 Food and... in Animal Feeds § 558.364 Neomycin sulfate. (a) Approvals. Type A medicated article: 325 grams per.... (c) (d) Conditions of use. Neomycin sulfate is used as follows: Neomycin Sulfate...

  17. 21 CFR 184.1307 - Ferric sulfate.

    Science.gov (United States)

    2010-04-01

    ... Substances Affirmed as GRAS § 184.1307 Ferric sulfate. (a) Ferric sulfate (iron (III) sulfate, Fe2(SO4)3 CAS Reg. No. 10028-22-5) is a yellow substance that may be prepared by oxidizing iron (II) sulfate or by treating ferric oxide or ferric hydroxide with sulfuric acid. (b) The ingredient must be of a...

  18. Isolation and identification of bacteria responsible for simultaneous anaerobic ammonium and sulfate removal

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Sulfate-dependent anaerobic ammonium oxidation is a novel biological reaction,in which ammonium is oxidized with sulfate as the electron acceptor under anoxic conditions.Ammonium and sulfate are cosmopolitan chemical species which are an integral part of the global nitrogen and sulfur cycles.A detailed exploration of sulfate-dependent anaerobic ammonium oxidation is quite practical.In this work,a bacterial strain named ASR has been isolated from an anaerobic ammonia and sulfate removing reactor working under steady-state.On the basis of electron microscopy,physiological tests and 16S rDNA phylogenetic sequence analysis,the strain ASR is found to be related to Bacillus benzoevorans.According to the biological carbon source utilization test,the strain ASR could use many carbon sources.Its optimum pH value and temperature were 8.5 and 30 °C,respectively.The test proves that the strain ASR is able to use sulfate to oxidize ammonia anaerobically.The maximum ammonia and sulfate removal rates were 44.4% and 40.0%,respectively.The present study provided biological evidence for the confirmation and development of sulfate-dependent anaerobic ammonium oxidation and brought new insights into the global nitrogen and sulfur cycles.

  19. Biphasic role of chondroitin sulfate in cardiac differentiation of embryonic stem cells through inhibition of Wnt/β-catenin signaling.

    Directory of Open Access Journals (Sweden)

    Robert D Prinz

    Full Text Available The glycosaminoglycan chondroitin sulfate is a critical component of proteoglycans on the cell surface and in the extracellular matrix. As such, chondroitin sulfate side chains and the sulfation balance of chondroitin play important roles in the control of signaling pathways, and have a functional importance in human disease. In contrast, very little is known about the roles of chondroitin sulfate molecules and sulfation patterns during mammalian development and cell lineage specification. Here, we report a novel biphasic role of chondroitin sulfate in the specification of the cardiac cell lineage during embryonic stem cell differentiation through modulation of Wnt/beta-catenin signaling. Lineage marker analysis demonstrates that enzymatic elimination of endogenous chondroitin sulfates leads to defects specifically in cardiac differentiation. This is accompanied by a reduction in the number of beating cardiac foci. Mechanistically, we show that endogenous chondroitin sulfate controls cardiac differentiation in a temporal biphasic manner through inhibition of the Wnt/beta-catenin pathway, a known regulatory pathway for the cardiac lineage. Treatment with a specific exogenous chondroitin sulfate, CS-E, could mimic these biphasic effects on cardiac differentiation and Wnt/beta-catenin signaling. These results establish chondroitin sulfate and its sulfation balance as important regulators of cardiac cell lineage decisions through control of the Wnt/beta-catenin pathway. Our work suggests that targeting the chondroitin biosynthesis and sulfation machinery is a novel promising avenue in regenerative strategies after heart injury.

  20. Kinetics of nitrate and sulfate removal using a mixed microbial culture with or without limited-oxygen fed.

    Science.gov (United States)

    Xu, Xi-Jun; Chen, Chuan; Wang, Ai-Jie; Guo, Hong-Liang; Yuan, Ye; Lee, Duu-Jong; Ren, Nan-Qi

    2014-07-01

    The biological degradation of nitrate and sulfate was investigated using a mixed microbial culture and lactate as the carbon source, with or without limited-oxygen fed. It was found that sulfate reduction was slightly inhibited by nitrate, since after nitrate depletion the sulfate reduction rate increased from 0.37 mg SO4 (2-)/mg VSS d to 0.71 mg SO4 (2-)/mg VSS d, and the maximum rate of sulfate reduction in the presence of nitrate corresponded to 56 % of the non-inhibited sulfate reduction rate determined after nitrate depleted. However, simultaneous but not sequential reduction of both oxy-anions was observed in this study, unlike some literature reports in which sulfate reduction starts only after depletion of nitrate, and this case might be due to the fact that lactate was always kept above the limiting conditions. At limited oxygen, the inhibited effect on sulfate reduction by nitrate was relieved, and the sulfate reduction rate seemed relatively higher than that obtained without limited-oxygen fed, whereas kept almost constant (0.86-0.89 mg SO4 (2-)/mg VSS d) cross the six ROS states. In contrast, nitrate reduction rates decreased substantially with the increase in the initial limited-oxygen fed, showing an inhibited effect on nitrate reduction by oxygen. Kinetic parameters determined for the mixed microbial culture showed that the maximum specific sulfate utilization rate obtained (0.098 ± 0.022 mg SO4 (2-)/(mg VSS h)) was similar to the reported typical value (0.1 mg SO4 (2-)/(mg VSS h)), also indicating a moderate inhibited effect by nitrate.

  1. Mobility of alkali cations in polypyrrole-dodecyl sulfate

    Energy Technology Data Exchange (ETDEWEB)

    Kupila, E.L. [Department of Chemistry, University of Turku, 20500 Turku (Finland); Kankare, J. [Department of Chemistry, University of Turku, 20500 Turku (Finland)

    1995-03-01

    Due to the immobility of the large dodecyl sulfate anion, the mobile ions in polypyrrole-dodecyl sulfate are small ions from the solution. Virgin PP-dodecyl sulfate does not contain other ionic species, but already the first reduction causes the incorporation of cations into the membrane. Using in situ AC conductimetry on a double-band platinum electrode, we show that the insertion of cations from the solution into the PP membrane proceeds as a non-conducting zone advancing from the solution interface toward the substrate. The model allows to estimate ion mobilities in the membrane giving 8.6x10{sup -7}cm{sup 2}s{sup -1}V{sup -1} for K{sup +}. (orig.)

  2. The seed composition of Arabidopsis mutants for the group 3 sulfate transporters indicates a role in sulfate translocation within developing seeds.

    Science.gov (United States)

    Zuber, Hélène; Davidian, Jean-Claude; Aubert, Grégoire; Aimé, Delphine; Belghazi, Maya; Lugan, Raphaël; Heintz, Dimitri; Wirtz, Markus; Hell, Rüdiger; Thompson, Richard; Gallardo, Karine

    2010-10-01

    Sulfate is required for the synthesis of sulfur-containing amino acids and numerous other compounds essential for the plant life cycle. The delivery of sulfate to seeds and its translocation between seed tissues is likely to require specific transporters. In Arabidopsis (Arabidopsis thaliana), the group 3 plasmalemma-predicted sulfate transporters (SULTR3) comprise five genes, all expressed in developing seeds, especially in the tissues surrounding the embryo. Here, we show that sulfur supply to seeds is unaffected by T-DNA insertions in the SULTR3 genes. However, remarkably, an increased accumulation of sulfate was found in mature seeds of four mutants out of five. In these mutant seeds, the ratio of sulfur in sulfate form versus total sulfur was significantly increased, accompanied by a reduction in free cysteine content, which varied depending on the gene inactivated. These results demonstrate a reduced capacity of the mutant seeds to metabolize sulfate and suggest that these transporters may be involved in sulfate translocation between seed compartments. This was further supported by sulfate measurements of the envelopes separated from the embryo of the sultr3;2 mutant seeds, which showed differences in sulfate partitioning compared with the wild type. A dissection of the seed proteome of the sultr3 mutants revealed protein changes characteristic of a sulfur-stress response, supporting a role for these transporters in providing sulfate to the embryo. The mutants were affected in 12S globulin accumulation, demonstrating the importance of intraseed sulfate transport for the synthesis and maturation of embryo proteins. Metabolic adjustments were also revealed, some of which could release sulfur from glucosinolates.

  3. Genes of primary sulfate assimilation are part of the glucosinolate biosynthetic network in Arabidopsis thaliana.

    Science.gov (United States)

    Yatusevich, Ruslan; Mugford, Sarah G; Matthewman, Colette; Gigolashvili, Tamara; Frerigmann, Henning; Delaney, Sean; Koprivova, Anna; Flügge, Ulf-Ingo; Kopriva, Stanislav

    2010-04-01

    Glucosinolates are plant secondary metabolites involved in responses to biotic stress. The final step of their synthesis is the transfer of a sulfo group from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) onto a desulfo precursor. Thus, glucosinolate synthesis is linked to sulfate assimilation. The sulfate donor for this reaction is synthesized from sulfate in two steps catalyzed by ATP sulfurylase (ATPS) and adenosine 5'-phosphosulfate kinase (APK). Here we demonstrate that R2R3-MYB transcription factors, which are known to regulate both aliphatic and indolic glucosinolate biosynthesis in Arabidopsis thaliana, also control genes of primary sulfate metabolism. Using trans-activation assays we found that two isoforms of APK, APK1, and APK2, are regulated by both classes of glucosinolate MYB transcription factors; whereas two ATPS genes, ATPS1 and ATPS3, are differentially regulated by these two groups of MYB factors. In addition, we show that the adenosine 5'-phosphosulfate reductases APR1, APR2, and APR3, which participate in primary sulfate reduction, are also activated by the MYB factors. These observations were confirmed by analysis of transgenic lines with modulated expression levels of the glucosinolate MYB factors. The changes in transcript levels also affected enzyme activities, the thiol content and the sulfate reduction rate in some of the transgenic plants. Altogether the data revealed that the MYB transcription factors regulate genes of primary sulfate metabolism and that the genes involved in the synthesis of activated sulfate are part of the glucosinolate biosynthesis network.

  4. Bacterial Adhesion & Blocking Bacterial Adhesion

    DEFF Research Database (Denmark)

    Vejborg, Rebecca Munk

    2008-01-01

    tract to the microbial flocs in waste water treatment facilities. Microbial biofilms may however also cause a wide range of industrial and medical problems, and have been implicated in a wide range of persistent infectious diseases, including implantassociated microbial infections. Bacterial adhesion...... is the first committing step in biofilm formation, and has therefore been intensely scrutinized. Much however, still remains elusive. Bacterial adhesion is a highly complex process, which is influenced by a variety of factors. In this thesis, a range of physico-chemical, molecular and environmental parameters......, which influence the transition from a planktonic lifestyle to a sessile lifestyle, have been studied. Protein conditioning film formation was found to influence bacterial adhesion and subsequent biofilm formation considerable, and an aqueous extract of fish muscle tissue was shown to significantly...

  5. Bacterial lipases

    NARCIS (Netherlands)

    Jaeger, Karl-Erich; Ransac, Stéphane; Dijkstra, Bauke W.; Colson, Charles; Heuvel, Margreet van; Misset, Onno

    1994-01-01

    Many different bacterial species produce lipases which hydrolyze esters of glycerol with preferably long-chain fatty acids. They act at the interface generated by a hydrophobic lipid substrate in a hydrophilic aqueous medium. A characteristic property of lipases is called interfacial activation, mea

  6. Bacterial Ecology

    DEFF Research Database (Denmark)

    Fenchel, Tom

    2011-01-01

    Bacterial ecology is concerned with the interactions between bacteria and their biological and nonbiological environments and with the role of bacteria in biogeochemical element cycling. Many fundamental properties of bacteria are consequences of their small size. Thus, they can efficiently exploit...

  7. Identification of sulfate reducers and Syntrophobacter sp. in anaerobic granular sludge by fatty-acid biomarkers and 16S rRNA probing

    NARCIS (Netherlands)

    Oude Elferink, S.J.W.H.; Boschker, H.T.S.; Stams, A.J.M.

    1998-01-01

    The sulfate-reducing bacterial sludge population in anaerobic bioreactors, treating different types of wastewater in the presence or absence of sulfate, was evaluated by polar-lipid fatty acid (PLFA) analyses, and by 16S rRNA dot-blot hybridizations using specific 16S rRNA- targeted oligonucleotide

  8. Identification of sulfate reducers and Syntrophobacter sp. in anaerobic granular sludge by fatty-acid biomarkers and 16S rRNA probing

    NARCIS (Netherlands)

    Oude Elferink, S.J.W.H.; Boschker, H.T.S.; Stams, A.J.M.

    1998-01-01

    The sulfate-reducing bacterial sludge population in anaerobic bioreactors, treating different types of wastewater in the presence or absence of sulfate, was evaluated by polar-lipid fatty acid (PLFA) analyses, and by 16S rRNA dot-blot hybridizations using specific 16S rRNA-targeted oligonucleotide p

  9. Diversity of Dominant Bacterial Taxa in Activated Sludge Promotes Functional Resistance following Toxic Shock Loading

    KAUST Repository

    Saikaly, Pascal

    2010-12-14

    Examining the relationship between biodiversity and functional stability (resistance and resilience) of activated sludge bacterial communities following disturbance is an important first step towards developing strategies for the design of robust biological wastewater treatment systems. This study investigates the relationship between functional resistance and biodiversity of dominant bacterial taxa by subjecting activated sludge samples, with different levels of biodiversity, to toxic shock loading with cupric sulfate (Cu[II]), 3,5-dichlorophenol (3,5-DCP), or 4-nitrophenol (4-NP). Respirometric batch experiments were performed to determine the functional resistance of activated sludge bacterial community to the three toxicants. Functional resistance was estimated as the 30 min IC50 or the concentration of toxicant that results in a 50% reduction in oxygen utilization rate compared to a referential state represented by a control receiving no toxicant. Biodiversity of dominant bacterial taxa was assessed using polymerase chain reaction-terminal restriction fragment length polymorphism (PCR-T-RFLP) targeting the 16S ribosomal RNA (16S rRNA) gene. Statistical analysis of 30 min IC50 values and PCR-T-RFLP data showed a significant positive correlation (P<0.05) between functional resistance and microbial diversity for each of the three toxicants tested. To our knowledge, this is the first study showing a positive correlation between biodiversity of dominant bacterial taxa in activated sludge and functional resistance. In this system, activated sludge bacterial communities with higher biodiversity are functionally more resistant to disturbance caused by toxic shock loading. © 2010 Springer Science+Business Media, LLC.

  10. Sodium Dodecyl Sulfate (SDS)-Loaded Nanoporous Polymer as Anti-Biofilm Surface Coating Material

    DEFF Research Database (Denmark)

    Li, Li; Molin, Søren; Yang, Liang

    2013-01-01

    -b-polydimethylsiloxane (1,2-PB-b-PDMS) block copolymer via chemical cross-linking of the 1,2-PB block followed by quantitative removal of the PDMS block. Sodium dodecyl sulfate (SDS) was loaded into the nanoporous 1,2-PB from aqueous solution. The SDS-loaded nanoporous polymer films were shown to block bacterial attachment...

  11. 21 CFR 520.82b - Aminopropazine fumarate, neomycin sulfate tablets.

    Science.gov (United States)

    2010-04-01

    ... chapter. (c) Conditions of use. (1) The drug is used in dogs to control bacterial diarrhea caused by... 21 Food and Drugs 6 2010-04-01 2010-04-01 false Aminopropazine fumarate, neomycin sulfate tablets. 520.82b Section 520.82b Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND...

  12. Fermentation parameters, quality and losses in sugarcane silages treated with chemical additives and a bacterial inoculant

    Directory of Open Access Journals (Sweden)

    André de Faria Pedroso

    2011-11-01

    Full Text Available The objective of this trial was to evaluate chemical additives and a bacterial inoculant on the inhibition of alcoholic fermentation and reduction of losses in sugarcane silages. Treatments were (doses on a fresh forage basis: without additive (control; urea (10 g/kg; urea (5 g/kg + sodium benzoate (0.5 g/kg; sodium benzoate (1 g/kg; urea + ammonium sulfate in a 9:1 relation (10 g/kg; Lactobacillus buchneri (5 × 10(4 cfu/g. Silages were produced in 10.16- × 30-cm PVC tubes, provided with tight lids adapted with Bunsen valves for gas losses quantification. Minisilos were opened 139 days after ensiling. Ethanol content (227 g/kg dry matter - DM and total DM loss (30% were high in the control silage. All additives, except benzoate, decreased ethanol concentration in silages. Inoculation with L. buchneri increased acetic acid content in the silage, resulting in a 41% reduction in ethanol content and the lowest gas loss among treatments (15.2%. There was synergistic effect between additives for the combined use of urea and benzoate. Silage treated with urea + ammonium sulfate has higher content of total digestible nutrients than the silage treated with urea exclusively.

  13. Heparan sulfate structure: methods to study N-sulfation and NDST action.

    Science.gov (United States)

    Dagälv, Anders; Lundequist, Anders; Filipek-Górniok, Beata; Dierker, Tabea; Eriksson, Inger; Kjellén, Lena

    2015-01-01

    Heparan sulfate proteoglycans are important modulators of cellular processes where the negatively charged polysaccharide chains interact with target proteins. The sulfation pattern of the heparan sulfate chains will determine the proteins that will bind and the affinity of the interactions. The N-deacetylase/N-sulfotransferase (NDST) enzymes are of key importance during heparan sulfate biosynthesis when the sulfation pattern is determined. In this chapter, metabolic labeling of heparan sulfate with [(35)S]sulfate or [(3)H]glucosamine in cell cultures is described, in addition to characterization of polysaccharide chain length and degree of N-sulfation. Methods to measure NDST enzyme activity are also presented.

  14. Comparative evaluation of antibacterial property and substantivity of chlorhexidine containing dentifrices with sodium lauryl sulfate and Tween as surfactants: An in vivo study

    Directory of Open Access Journals (Sweden)

    V Venu

    2013-01-01

    Full Text Available Aim: The aim of the study was to determine the antibacterial property and substantivity of chlorhexidine containing dentifrices with sodium lauryl sulfate (SLS and Tween as surfactants. Materials and Methods: It is a double-blind cross over the study, a total of 20 children within their mixed dentition period (7-13 year having Streptococci mutans count more than 10 6 were selected for the main study. Three types of chlorhexidine containing dentifrices were used with a washout period of 1 week. Out of the three toothpastes, one was without surfactant and other two toothpastes contained SLS and Tween as surfactants respectively. 20 volunteers brushed for 1 min during the study day with their assigned toothpaste. Saliva samples were collected before brushing, immediately after brushing and 1, 3, 5, and 7 hand sent for microbial analysis. The culture carried out by inoculating saliva sample onto Mitis salivarius agar for selective isolation of S. mutans followed by counting of colony forming unit. Results: Group I and III (Chlorhexidine and CHX + Tween had shown statistically significant reduction in bacterial count until 7 h when compared to their baseline values ( P < 0.001. Group II toothpaste (CHX + SLS had shown significant reduction in bacterial count until 3 h only. On inter group comparison, Group III had shown good amount of percentage reduction in bacterial count when compared to other groups. Conclusion: CHX + Tween toothpaste had shown statistically significant reduction in antibacterial activity and substantivity than other groups. These findings show chlorhexidine containing toothpaste with non-ionic surfactant will be able to maintain the antibacterial property and substantivity of chlorhexidine.

  15. A Direct Sulfation Process of a Marine Polysaccharide in Ionic Liquid.

    Science.gov (United States)

    Chopin, Nathalie; Sinquin, Corinne; Ratiskol, Jacqueline; Zykwinska, Agata; Weiss, Pierre; Cérantola, Stéphane; Le Bideau, Jean; Colliec-Jouault, Sylvia

    2015-01-01

    GY785 is an exopolysaccharide produced by a mesophilic bacterial strain Alteromonas infernus discovered in the deep-sea hydrothermal vents. GY785 highly sulfated derivative (GY785 DRS) was previously demonstrated to be a promising molecule driving the efficient mesenchymal stem cell chondrogenesis for cartilage repair. This glycosaminoglycan- (GAG-) like compound was modified in a classical solvent (N,N'-dimethylformamide). However, the use of classical solvents limits the polysaccharide solubility and causes the backbone degradation. In the present study, a one-step efficient sulfation process devoid of side effects (e.g., polysaccharide depolymerization and/or degradation) was developed to produce GAG-like derivatives. The sulfation of GY785 derivative (GY785 DR) was carried out using ionic liquid as a reaction medium. The successful sulfation of this anionic and highly branched heteropolysaccharide performed in ionic liquid would facilitate the production of new molecules of high specificity for biological targets such as tissue engineering or regenerative medicine.

  16. Studies on Sulfation of Lycium barbarum Polysaccharides

    Institute of Scientific and Technical Information of China (English)

    YI,Jian-Ping; YAN,Hong; ZHONG,Ru-Gang

    2004-01-01

    @@ Polysaccharides can anti-virus, such as human immunodeficiency virus (HIV-1),[1] herpes simplex virus (HSV-1,HSV-2) and cytomegalovirus. Some of them are sulfates, e.g. dextran sulfate, heparin, sulfonation of chitosan and sulfated derivatives of Lentinan. Our results showed that sulfated derivatives of Lycium barbarum polysaccharides (LBP)have anti-HIV activity. Because the anti-HIV activity of LBP was deeply dependent on the molecular weight, the sulfation pattern and glycosidic branches besides degree of sulfation (DS), so we emphasized our work on the factors of DS.

  17. [Bacterial vaginosis].

    Science.gov (United States)

    Romero Herrero, Daniel; Andreu Domingo, Antonia

    2016-07-01

    Bacterial vaginosis (BV) is the main cause of vaginal dysbacteriosis in the women during the reproductive age. It is an entity in which many studies have focused for years and which is still open for discussion topics. This is due to the diversity of microorganisms that cause it and therefore, its difficult treatment. Bacterial vaginosis is probably the result of vaginal colonization by complex bacterial communities, many of them non-cultivable and with interdependent metabolism where anaerobic populations most likely play an important role in its pathogenesis. The main symptoms are an increase of vaginal discharge and the unpleasant smell of it. It can lead to serious consequences for women, such as an increased risk of contracting sexually transmitted infections including human immunodeficiency virus and upper genital tract and pregnancy complications. Gram stain is the gold standard for microbiological diagnosis of BV, but can also be diagnosed using the Amsel clinical criteria. It should not be considered a sexually transmitted disease but it is highly related to sex. Recurrence is the main problem of medical treatment. Apart from BV, there are other dysbacteriosis less characterized like aerobic vaginitis of which further studies are coming slowly but are achieving more attention and consensus among specialists.

  18. Source-receptor relationships between East Asian sulfur dioxide emissions and Northern Hemisphere sulfate concentrations

    Directory of Open Access Journals (Sweden)

    J. Liu

    2008-07-01

    obtained using either sensitivity (i.e., varying emissions from a region to examine the effects on downwind concentrations or tagging techniques. Our findings suggest that future changes in EA sulfur emissions may cause little change in the sulfate-induced health impact over downwind continents. However, SO2 emission reductions may significantly reduce the sulfate concentrations and the resulting negative radiative forcing over the North Pacific and the United States, thus providing a warming tendency.

  19. Source-receptor relationships between East Asian sulfur dioxide emissions and Northern Hemisphere sulfate concentrations

    Science.gov (United States)

    Liu, J.; Mauzerall, D. L.; Horowitz, L. W.

    2008-07-01

    ) or tagging techniques. Our findings suggest that future changes in EA sulfur emissions may cause little change in the sulfate-induced health impact over downwind continents. However, SO2 emission reductions may significantly reduce the sulfate concentrations and the resulting negative radiative forcing over the North Pacific and the United States, thus providing a warming tendency.

  20. A sulfate conundrum: Dissolved sulfates of deep-saline brines and carbonate-associated sulfates

    Science.gov (United States)

    Labotka, Dana M.; Panno, Samuel V.; Locke, Randall A.

    2016-10-01

    Sulfates in deeply circulating brines and carbonate-associated sulfates (CAS) within sedimentary units of the Cambrian strata in the Illinois Basin record a complex history. Dissolved sulfate within the Mt. Simon Sandstone brines exhibits average δ34SSO4 values of 35.4‰ and δ18OSO4 values of 14.6‰ and appears to be related to Cambrian seawater sulfate, either original seawater or sourced from evaporite deposits such as those in the Michigan Basin. Theoretical and empirical relationships based on stable oxygen isotope fractionation suggest that sulfate within the lower depths of the Mt. Simon brines has experienced a long period of isolation, possibly several tens of millions of years. Comparison with brines from other stratigraphic units shows the Mt. Simon brines are geochemically unique. Dissolved sulfate from brines within the Ironton-Galesville Sandstone averages 22.7‰ for δ34SSO4 values and 13.0‰ for δ18OSO4 values. The Ironton-Galesville brine has mixed with younger groundwater, possibly of Ordovician to Devonian age and younger. The Eau Claire Formation lies between the Mt. Simon and Ironton-Galesville Sandstones. The carbonate units of the Eau Claire and stratigraphically equivalent Bonneterre Formation contain CAS that appears isotopically related to the Late Pennsylvanian-Early Permian Mississippi Valley-type ore pulses that deposited large sulfide minerals in the Viburnum Trend/Old Lead Belt ore districts. The δ34SCAS values range from 21.3‰ to 9.3‰, and δ18OCAS values range from +1.4‰ to -2.6‰ and show a strong covariance (R2 = 0.94). The largely wholesale replacement of Cambrian seawater sulfate signatures in these dolomites does not appear to have affected the sulfate signatures in the Mt. Simon brines even though these sulfide deposits are found in the stratigraphically equivalent Lamotte Sandstone to the southwest. On the basis of this and previous studies, greater fluid densities of the Mt. Simon brines may have prevented the

  1. Sulfation of thyroid hormone by estrogen sulfotransferase

    NARCIS (Netherlands)

    M.H.A. Kester (Monique); T.J. Visser (Theo); C.H. van Dijk (Caren); D. Tibboel (Dick); A.M. Hood (Margaret); N.J. Rose; W. Meinl; U. Pabel; H. Glatt; C.N. Falany; M.W. Coughtrie

    1999-01-01

    textabstractSulfation is one of the pathways by which thyroid hormone is inactivated. Iodothyronine sulfate concentrations are very high in human fetal blood and amniotic fluid, suggesting important production of these conjugates in utero. Human estrogen sulfotransferas

  2. Inhibition of sulfate reducing bacteria in aquifer sediment by iron nanoparticles.

    Science.gov (United States)

    Kumar, Naresh; Omoregie, Enoma O; Rose, Jerome; Masion, Armand; Lloyd, Jonathan R; Diels, Ludo; Bastiaens, Leen

    2014-03-15

    Batch microcosms were setup to determine the impact of different sized zero valent iron (Fe(0)) particles on microbial sulfate reduction during the in situ bio-precipitation of metals. The microcosms were constructed with aquifer sediment and groundwater from a low pH (3.1), heavy-metal contaminated aquifer. Nano (nFe(0)), micro (mFe(0)) and granular (gFe(0)) sized Fe(0) particles were added to separate microcosms. Additionally, selected microcosms were also amended with glycerol as a C-source for sulfate-reducing bacteria. In addition to metal removal, Fe(0) in microcosms also raised the pH from 3.1 to 6.5, and decreased the oxidation redox potential from initial values of 249 to -226 mV, providing more favorable conditions for microbial sulfate reduction. mFe(0) and gFe(0) in combination with glycerol were found to enhance microbial sulfate reduction. However, no sulfate reduction occurred in the controls without Fe(0) or in the microcosm amended with nFe(0). A separate dose test confirmed the inhibition for sulfate reduction in presence of nFe(0). Hydrogen produced by Fe(0) was not capable of supporting microbial sulfate reduction as a lone electron donor in this study. Microbial analysis revealed that the addition of Fe(0) and glycerol shifted the microbial community towards Desulfosporosinus sp. from a population initially dominated by low pH and metal-resisting Acidithiobacillus ferrooxidans.

  3. Bioremediation of copper-containing wastewater by sulfate reducing bacteria coupled with iron.

    Science.gov (United States)

    Bai, He; Kang, Yong; Quan, Hongen; Han, Yang; Sun, Jiao; Feng, Ying

    2013-11-15

    In order to treat copper-containing wastewater effectively using sulfate reducing bacteria (SRB), iron (Fe(0)) was added to enhance the activity of SRB. The SRB system and the SRB + Fe(0) system were operated under continuous operation. The sulfate reduction efficiency of the SRB + Fe(0) system was twice as much as that of the SRB system with the sulfate loading rate at 125  mg L(-1) h(-1). The effect of COD/SO4(2-) on sulfate reduction indicates an enhanced activity of SRB by adding Fe(0). 99% of total sulfate was deducted in both systems at pH 4.0-7.0, and temperature slightly influenced the removal of sulfate in the SRB + Fe(0) system. In the copper-containing wastewater treatment, the SRB + Fe(0) system shows a better performance since sulfate removal in this system was higher than the SRB system, and the removal ratio of Cu(2+) was held above 95% in SRB + Fe(0) system at all influent Cu(2+) concentrations.

  4. Dissimilatory reduction of perchlorate and other common pollutants by a consortium enriched from tidal flats of the Yellow Sea

    Institute of Scientific and Technical Information of China (English)

    Nirmala Bardiya; Jae-Ho Bae

    2015-01-01

    Objective: To enrich a facultative anaerobic bacterial consortium from the Yellow Sea and assess its ability to reduce perchlorate and other co-pollutants. Methods: Bacterial consortium collected from the tidal flats of the Yellow Sea was enriched in an anoxic medium containing perchlorate as the electron (e-) acceptor and acetate as the electron (e-) donor. The enriched consortium was then tested for perchlorate reduction under different perchlorate concentrations and in the presence of nitrate by using standard anaerobic techniques. The complete enzymatic reduction of perchlorate to chloride was confirmed by chlorite dismutation. Ability of the consortium to grow with alternate e- acceptors was also tested with acetate as the e- donor. Results: The enriched consortium could rapidly reduce perchlorate up to the initial concentration of 25.65 mmol/L. In the presence of nitrate, perchlorate reduction did not occur immediately and reduction of nitrate started after a lag phase, with concomitant accumulation of nitrite. The perchlorate-enriched consortium could reduce chlorate, oxygen, Cr (VI), and selenate as the alternate e- acceptors but failed to utilize sulfate, thiosulfate, sulfite, and nitrite. Conclusions: The consortium from the tidal flats of the Yellow Sea could reduce perchlorate and co-contaminants such as chlorate, nitrate, Cr (VI), and selenate under heterotrophic conditions with acetate as the e- donor and carbon source. While perchlorate was completely dismutated into innocuous chloride and oxygen, accumulation of nitrite occurred during the reduction of nitrate.

  5. Characterization of the bacterial community in the sediment of a brackish lake with oyster aquaculture.

    Science.gov (United States)

    Santander-De Leon, Sheila Mae S; Okunishi, Suguru; Kihira, Masaki; Nakano, Miyo; Nuñal, Sharon N; Hidaka, Masayasu; Yoshikawa, Takeshi; Maeda, Hiroto

    2013-01-01

    The physicochemical properties and bacterial community in sediments of Lake Shiraishi, a lake with brackish water, were characterized to elucidate the influence of oyster farming and seawater and freshwater inflow. Physicochemical analyses suggested the marine origin of the sediment at the mouth of the lake, while higher organic matter load and the resultant anaerobic, reductive condition of the sediments of the inner part were observed. The bacterial community in the sediments reflects these sediment environments: the bacterial community in the vicinities of oyster farms included sulfate-reducing bacteria (SRB) , although sulfur-oxidizing bacteria (SOB) were found at all the sampling sites. In addition, similarity of the band profiles obtained with 16S ribosomal RNA gene (16S rDNA) -denaturing gradient gel electrophoresis (DGGE) decreased in proportion to the distance from the mouth of the lake to the oyster farms in the inner part. This study was able to characterize the microbial community shift in brackish lake sediments with an oyster aquaculture system through the molecular fingerprinting technique, DGGE, in relation to their physicochemical characteristics.

  6. Effect of magnesium peroxide biostimulation of fish feed-loaded marine sediments on changes in the bacterial community.

    Science.gov (United States)

    Santander-De Leon, Sheila Mae S; Okunishi, Suguru; Kihira, Masaki; Nakano, Miyo; Nuñal, Sharon N; Hidaka, Masayasu; Yoshikawa, Takeshi; Maeda, Hiroto

    2013-01-01

    The effect of an oxygen-releasing compound (ORC) magnesium peroxide (MgO(2)) on the changes in the bacterial community in organically polluted sediment of aquaculture farms was tested in a microcosm experiment. The sediment, to which fish feed was added, was treated with 1% or 5% MgO(2). The addition of fish feed induced a highly reduced environment with low redox potential, high total sulfides, and abundance of sulfate-reducing bacteria (SRB) . Although the sediment remained highly reduced at 1% MgO(2), there was a significant reduction of total sulfides, increase of redox potential, and resultant reduction of SRB. The bacterial community clearly changed with the treatments according to denaturing gradient gel electrophoresis (DGGE) analysis of 16S ribosomal RNA gene (16S rDNA) . Aerobes disappeared in the fish feed-added sediment, and some SRB emerged in place of these aerobes. On the other hand, the SRB disappeared in the ORC-amended sediment due to its highly oxic condition. This study revealed the bacterial community in the sediments was affected mainly by the redox potential and resultant sulfides produced by SRB, but total organic carbon and nitrogen were not determinants of the microbial population.

  7. 21 CFR 524.1484e - Neomycin sulfate and polymyxin B sulfate ophthalmic solution.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 6 2010-04-01 2010-04-01 false Neomycin sulfate and polymyxin B sulfate ophthalmic solution. 524.1484e Section 524.1484e Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF... DOSAGE FORM NEW ANIMAL DRUGS § 524.1484e Neomycin sulfate and polymyxin B sulfate ophthalmic solution....

  8. 21 CFR 582.1643 - Potassium sulfate.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 6 2010-04-01 2010-04-01 false Potassium sulfate. 582.1643 Section 582.1643 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) ANIMAL... Additives § 582.1643 Potassium sulfate. (a) Product. Potassium sulfate. (b) Conditions of use....

  9. 21 CFR 184.1643 - Potassium sulfate.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Potassium sulfate. 184.1643 Section 184.1643 Food... Specific Substances Affirmed as GRAS § 184.1643 Potassium sulfate. (a) Potassium sulfate (K2SO4, CAS Reg... having a bitter, saline taste. It is prepared by the neutralization of sulfuric acid with...

  10. 21 CFR 582.5443 - Magnesium sulfate.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 6 2010-04-01 2010-04-01 false Magnesium sulfate. 582.5443 Section 582.5443 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) ANIMAL... Supplements 1 § 582.5443 Magnesium sulfate. (a) Product. Magnesium sulfate. (b) Conditions of use....

  11. 21 CFR 184.1443 - Magnesium sulfate.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Magnesium sulfate. 184.1443 Section 184.1443 Food... Specific Substances Affirmed as GRAS § 184.1443 Magnesium sulfate. (a) Magnesium sulfate (MgSO4·7H2O, CAS... magnesium oxide, hydroxide, or carbonate with sulfuric acid and evaporating the solution to...

  12. Sulfate transport in Penicillium chrysogenum plasma membranes.

    OpenAIRE

    Hillenga, Dirk J.; Versantvoort, Hanneke J.M.; Driessen, Arnold J. M.; Konings, Wil N.

    1996-01-01

    Transport studies with Penicillium chrysogenum plasma membranes fused with cytochrome c oxidase liposomes demonstrate that sulfate uptake is driven by the transmembrane pH gradient and not by the transmembrane electrical potential. Ca2+ and other divalent cations are not required. It is concluded that the sulfate transport system catalyzes the symport of two protons with one sulfate anion.

  13. Pore-water sulfate concentration profiles of sediment cores from Krishna-Godavari and Goa basins, India

    Digital Repository Service at National Institute of Oceanography (India)

    Mazumdar, A.; Paropkari, A.L.; Borole, D.V.; Rao, B.R.; Khadge, N.H.; Karisiddaiah, S.M.; Kocherla, M.; Joao, H.M.

    . Authigenic carbonates with depleted carbon isotopic composition (Delta sup(13) C = - 48 to - 50 %) at the base of the sulfate reduction zone in a core from K -G suggests anaerobic methane oxidation (AMO) process. The possibility. that the underlying methane...

  14. Electron transfer from sulfate-reducing bacteria biofilm promoted by reduced graphene sheets

    Institute of Scientific and Technical Information of China (English)

    WAN Yi; ZHANG Dun; WANG Yi; WU Jiajia

    2012-01-01

    Reduced graphene sheets (RGSs) mediate electron transfer between sulfate-reducing bacteria (SRB) and solid electrodes,and promote the development of microbial fuelcells (MFC).We have investigated RSG-promoted electron transfer between SRB and a glassy carbon (GC) electrode.The RGSs were produced at high yield by a chemical sequence involving graphite oxidation,ultrasonic exfoliation of nanosheets,and N2H4 reduction.Cyclic voltammetric testing showed that the characteristic anodic peaks (around 0.3 V)might arise from the combination of bacterial membrane surface cytochrome c3 and the metabolic products of SRB.After 6 d,another anodic wave gradually increased to a maximum current peak and a third anodic signal became visible at around 0 V.The enhancements of two characteristic anodic peaks suggest that RSGs mediate electron-transfer kinetics between bacteria and the solid electrode.Manipulation of these recentlydiscovered electron-transport mechanisms will lead to significant advances in MFC engineering.

  15. High sulfur isotope fractionation associated with anaerobic oxidation of methane in a low sulfate, iron rich environment

    Directory of Open Access Journals (Sweden)

    Hannah Sophia Weber

    2016-06-01

    Full Text Available Sulfur isotope signatures provide key information for the study of microbial activity in modern systems and the evolution of the Earth surface redox system. Microbial sulfate reducers shift sulfur isotope distributions by discriminating against heavier isotopes. This discrimination is strain-specific and often suppressed at sulfate concentrations in the lower micromolar range that are typical to freshwater systems and inferred for ancient oceans. Anaerobic oxidation of methane (AOM is a sulfate-reducing microbial process with a strong impact on global sulfur cycling in modern habitats and potentially in the geological past, but its impact on sulfur isotope signatures is poorly understood, especially in low sulfate environments. We investigated sulfur cycling and 34S fractionation in a low-sulfate freshwater sediment with biogeochemical conditions analogous to Early Earth environments. The zone of highest AOM activity was associated in situ with a zone of strong 34S depletions in the pool of reduced sulfur species, indicating a coupling of sulfate reduction and AOM at sulfate concentrations < 50 µmol L-1. In slurry incubations of AOM-active sediment, the addition of methane stimulated sulfate reduction and induced a bulk sulfur isotope effect of ~29 ‰. Our results imply that sulfur isotope signatures may be strongly impacted by AOM even at sulfate concentrations two orders of magnitude lower than at present oceanic levels. Therefore, we suggest that sulfur isotope fractionation during AOM must be considered when interpreting 34S signatures in modern and ancient environment.

  16. Microbial iron reduction and methane oxidation in subsurface sediments of the Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Fernandes, C.E.G.; Judith, M.; Gonsalves, M.J.B.D.; Nazareth, D.R.; Nagarchi, L.; Kamaleson, A.S.

    oxidation. Total bacterial abundance (TC), viable aerobic counts accounting for aerobic and facultative anaerobes (TVCa), viable anaerobic counts (TVCan), methane, sulfate, ferrous [Fe(II], hydroxylamine extractable iron and HCl extractable iron...

  17. Structure and anticoagulant activity of a fucosylated chondroitin sulfate from echinoderm. Sulfated fucose branches on the polysaccharide account for its high anticoagulant action.

    Science.gov (United States)

    Mourão, P A; Pereira, M S; Pavão, M S; Mulloy, B; Tollefsen, D M; Mowinckel, M C; Abildgaard, U

    1996-09-27

    A polysaccharide isolated from the body wall of the sea cucumber Ludwigothurea grisea has a backbone like that of mammalian chondroitin sulfate: [4-beta-D-GlcA-1-->3-beta-D-GalNAc-1]n but substituted at the 3-position of the beta--glucuronic acid residues with sulfated alpha--fucopyranosyl branches (Vieira, R. P., Mulloy, B., and Mourão, P. A. S. (1991) J. Biol. Chem. 266, 13530-13536). Mild acid hydrolysis removes the sulfated alpha--fucose branches, and cleaved residues have been characterized by 1H NMR spectroscopy; the most abundant species is fucose 4-O-monosulfate, but 2,4- and 3, 4-di-O-sulfated residues are also present. Degradation of the remaining polysaccharide with chondroitin ABC lyase shows that the sulfated alpha-L-fucose residues released by mild acid hydrolysis are concentrated toward the non-reducing end of the polysaccharide chains; enzyme-resistant polysaccharide material includes the reducing terminal and carries acid-resistant -fucose substitution. The sulfated alpha-L-fucose branches confer anticoagulant activity on the polysaccharide. The specific activity of fucosylated chondroitin sulfate in the activated partial thromboplastin time assay is greater than that of a linear homopolymeric alpha-L-fucan with about the same level of sulfation; this activity is lost on defucosylation or desulfation but not on carboxyl-reduction of the polymer. Assays with purified reagents show that the fucosylated chondroitin sulfate can potentiate the thrombin inhibition activity of both antithrombin and heparin cofactor II.

  18. Tris(ethylenediaminecobalt(II sulfate

    Directory of Open Access Journals (Sweden)

    Bunlawee Yotnoi

    2010-06-01

    Full Text Available The structure of the title compound, [CoII(C2H8N23]SO4, the cobalt example of [M(C2H8N23]SO4, is reported. The Co and S atoms are located at the 2d and 2c Wyckoff sites (point symmetry 32, respectively. The Co atom is coordinated by six N atoms of three chelating ethylenediamine molecules generated from half of the ethylenediamine molecule in the asymmetric unit. The O atoms of the sulfate anion are disordered mostly over two crystallographic sites. The third disorder site of O (site symmetry 3 has a site occupancy approaching zero. The H atoms of the ethylenediamine molecules interact with the sulfate anions via intermolecular N—H...O hydrogen-bonding interactions.

  19. Sulfates on Mars: Indicators of Aqueous Processes

    Science.gov (United States)

    Bishop, Janice L.; Lane, Melissa D.; Dyar, M. Darby; Brown, Adrian J.

    2006-01-01

    Recent analyses by MER instruments at Meridiani Planum and Gusev crater and the OMEGA instrument on Mars Express have provided detailed information about the presence of sulfates on Mars [1,2,3]. We are evaluating these recent data in an integrated multi-disciplinary study of visible-near-infrared, mid-IR and Mossbauer spectra of several sulfate minerals and sulfate-rich analog sites. Our analyses suggest that hydrated iron sulfates may account for features observed in Mossbauer and mid-IR spectra of Martian soils [4]. The sulfate minerals kieserite, gypsum and other hydrated sulfates have been identified in OMEGA spectra in the layered terrains in Valles Marineris and Terra Meridiani [2]. These recent discoveries emphasize the importance of studying sulfate minerals as tracers of aqueous processes. The sulfate-rich rock outcrops observed in Meridiani Planum may have formed in an acidic environment similar to acid rock drainage environments on Earth [5]. Because microorganisms typically are involved in the oxidation of sulfides to sulfates in terrestrial sites, sulfate-rich rock outcrops on Mars may be a good location to search for evidence of past life on that planet. Whether or not life evolved on Mars, following the trail of sulfate minerals will lead to a better understanding of aqueous processes and chemical weathering.

  20. Bacterial hydrodynamics

    CERN Document Server

    Lauga, Eric

    2015-01-01

    Bacteria predate plants and animals by billions of years. Today, they are the world's smallest cells yet they represent the bulk of the world's biomass, and the main reservoir of nutrients for higher organisms. Most bacteria can move on their own, and the majority of motile bacteria are able to swim in viscous fluids using slender helical appendages called flagella. Low-Reynolds-number hydrodynamics is at the heart of the ability of flagella to generate propulsion at the micron scale. In fact, fluid dynamic forces impact many aspects of bacteriology, ranging from the ability of cells to reorient and search their surroundings to their interactions within mechanically and chemically-complex environments. Using hydrodynamics as an organizing framework, we review the biomechanics of bacterial motility and look ahead to future challenges.

  1. Chondroitin Sulfate Perlecan Enhances Collagen Fibril Formation

    DEFF Research Database (Denmark)

    Kvist, A. J.; Johnson, A. E.; Mörgelin, M.

    2006-01-01

    produced in the presence of perlecan. Interestingly, the enhancement of collagen fibril formation is independent on the core protein and is mimicked by chondroitin sulfate E but neither by chondroitin sulfate D nor dextran sulfate. Furthermore, perlecan chondroitin sulfate contains the 4,6-disulfated......Inactivation of the perlecan gene leads to perinatal lethal chondrodysplasia. The similarity to the phenotypes of the Col2A1 knock-out and the disproportionate micromelia mutation suggests perlecan involvement in cartilage collagen matrix assembly. We now present a mechanism for the defect...... in collagen type II fibril assembly by perlecan-null chondrocytes. Cartilage perlecan is a heparin sulfate or a mixed heparan sulfate/chondroitin sulfate proteoglycan. The latter form binds collagen and accelerates fibril formation in vitro, with more defined fibril morphology and increased fibril diameters...

  2. Structural studies on sulfated oligosaccharides derived from the carbohydrate-protein linkage region of chondroitin 6-sulfate proteoglycans of shark cartilage. (II.) Seven compounds containing 2 or 3 sulfate residues.

    NARCIS (Netherlands)

    Vliegenthart, J.F.G.; Waard, P. de; Harada, T.; Sugahara, K.

    1992-01-01

    Shark cartilage proteoglycans bear predominantly chondroitin 6-sulfate. After exhaustive protease digestion, reductive beta-elimination and subsequent chondroitinase ABC digestion, 13 hexasaccharide alditols were obtained from the carbohydrate-protein linkage region and six of them contain 0 or 1 su

  3. Sulfation and biological activities of konjac glucomannan.

    Science.gov (United States)

    Bo, Surina; Muschin, Tegshi; Kanamoto, Taisei; Nakashima, Hideki; Yoshida, Takashi

    2013-05-15

    The sulfation of konjac glucomannan and its anti-HIV and blood anticoagulant activities were investigated. Konjac glucomannan is a polysaccharide occurring naturally in konjac plant tubers and has high molecular weights. Solubility in water is very low, and the aqueous solutions at low concentrations have high viscosity. Before sulfation, hydrolysis by diluted sulfuric acid was carried out to decrease the molecular weights of M¯n=19.2 × 10(4)-0.2 × 10(4). Sulfation with piperidine-N-sulfonic acid or SO3-pyridine complex gave sulfated konjac glucomannans with molecular weights of M¯n=1.0 × 10(4)-0.4 × 10(4) and degrees of sulfation (DS) of 1.3-1.4. It was found that the sulfated konjac glucomannans had potent anti-HIV activity at a 50% effective concentration, (EC50) of 1.2-1.3 μg/ml, which was almost as high as that of an AIDS drug, ddC, whose EC50=3.2 μg/ml, and moderate blood anticoagulant activity, AA=0.8-22.7 units/mg, compared to those of standard sulfated polysaccharides, curdlan (10 units/mg) and dextran (22.7 units/mg) sulfates. Structural analysis of sulfated konjac glucomannans with negatively charged sulfated groups was performed by high resolution NMR, and the interaction between poly-l-lysine with positively charged amino groups as a model compound of proteins and peptides was measured by surface plasmon resonance measurement, suggesting that the sulfated konjac glucomannans had a high binding stability on immobilized poly-l-lysine. The binding of sulfated konjac glucomannan was concentration-dependent, and the biological activity of the sulfated konjac glucomannans may be due to electrostatic interaction between the sulfate and amino groups.

  4. Biodegradation of endosulfan and endosulfan sulfate by Achromobacter xylosoxidans strain C8B in broth medium.

    Science.gov (United States)

    Singh, Ngangbam Sarat; Singh, Dileep K

    2011-09-01

    Endosulfan is one of the most widely used wide spectrum cyclodiene organochlorine insecticide. In environment, endosulfan can undergo either oxidation or hydrolysis reaction to form endosulfan sulfate and endosulfan diol respectively. Endosulfan sulfate is as toxic and as persistent as its parent isomers. In the present study, endosulfan degrading bacteria were isolated from soil through selective enrichment technique using sulfur free medium with endosulfan as sole sulfur source. Out of the 8 isolated bacterial strains, strain C8B was found to be the most efficient endosulfan degrader, degrading 94.12% α-endosulfan and 84.52% β-endosulfan. The bacterial strain was identified as Achromobacter xylosoxidans strain C8B on the basis of 16S rDNA sequence similarity. Achromobacter xylosoxidans strain C8B was also found to degrade 80.10% endosulfan sulfate using it as sulfur source. No known metabolites were found to be formed in the culture media during the entire course of degradation. Besides, the bacterial strain was found to degrade all the known endosulfan metabolites. There was marked increase in the quantity of released CO(2) from the culture media with endosulfan as sulfur source as compared to MgSO(4) suggesting that the bacterial strain, Achromobacter xylosoxidans strain C8B probably degraded endosulfan completely through the formation of endosulfan ether.

  5. Antimicrobial effect of a crude sulfated polysaccharide from the red seaweed Gracilaria ornata

    Directory of Open Access Journals (Sweden)

    Rodrigo das Neves dos Santos Amorim

    2012-04-01

    Full Text Available The aim of this study was to determine the yield, chemical composition, specific rotation (SR, infrared (IR spectroscopy and the effect on bacterial growth of a crude sulfated polysaccharide (SP from the red marine alga G. ornata (Go. Go-1 (25°C, Go-2 (80°C, and Go-3 (80°C were sequentially extracted and yielded 9.2%. The contents of sulfate (5.88-10.3% and proteins (0.1-3.7% were small. The values of SR were [µ]D20°f -19.0, -51.0, and -56.5, respectively. IR spectrums showed the presence of galactose-4 sulfate and absence of 3,6-anydrogalactose-2 sulfate, galactose-6 sulfate and galactose-2 sulfate. SR and IR techniques confirmed SPs. Go-3 was tested on the growth of bacteria (Bacillus subtilis, Staphylococcus aureus, Enterobacter aerogens, Escherichia coli, Pseudomonas aeruginosa, Salmonela choleraesuis and Salmonela typhi, but only E. coli was inhibited.

  6. Microbial community response to addition of polylactate compounds to stimulate hexavalent chromium reduction in groundwater.

    Science.gov (United States)

    Brodie, Eoin L; Joyner, Dominique C; Faybishenko, Boris; Conrad, Mark E; Rios-Velazquez, Carlos; Malave, Josue; Martinez, Ramon; Mork, Benjamin; Willett, Anna; Koenigsberg, Steven; Herman, Donald J; Firestone, Mary K; Hazen, Terry C

    2011-10-01

    To evaluate the efficacy of bioimmobilization of Cr(VI) in groundwater at the Department of Energy Hanford site, we conducted a series of microcosm experiments using a range of commercial electron donors with varying degrees of lactate polymerization (polylactate). These experiments were conducted using Hanford Formation sediments (coarse sand and gravel) immersed in Hanford groundwater, which were amended with Cr(VI) and several types of lactate-based electron donors (Hydrogen Release Compound, HRC; primer-HRC, pHRC; extended release HRC) and the polylactate-cysteine form (Metal Remediation Compound, MRC). The results showed that polylactate compounds stimulated an increase in bacterial biomass and activity to a greater extent than sodium lactate when applied at equivalent carbon concentrations. At the same time, concentrations of headspace hydrogen and methane increased and correlated with changes in the microbial community structure. Enrichment of Pseudomonas spp. occurred with all lactate additions, and enrichment of sulfate-reducing Desulfosporosinus spp. occurred with almost complete sulfate reduction. The results of these experiments demonstrate that amendment with the pHRC and MRC forms result in effective removal of Cr(VI) from solution most likely by both direct (enzymatic) and indirect (microbially generated reductant) mechanisms.

  7. Sulfate assimilation in eukaryotes: fusions, relocations and lateral transfers

    Directory of Open Access Journals (Sweden)

    Durnford Dion G

    2008-02-01

    Full Text Available Abstract Background The sulfate assimilation pathway is present in photosynthetic organisms, fungi, and many bacteria, providing reduced sulfur for the synthesis of cysteine and methionine and a range of other metabolites. In photosynthetic eukaryotes sulfate is reduced in the plastids whereas in aplastidic eukaryotes the pathway is cytosolic. The only known exception is Euglena gracilis, where the pathway is localized in mitochondria. To obtain an insight into the evolution of the sulfate assimilation pathway in eukaryotes and relationships of the differently compartmentalized isoforms we determined the locations of the pathway in lineages for which this was unknown and performed detailed phylogenetic analyses of three enzymes involved in sulfate reduction: ATP sulfurylase (ATPS, adenosine 5'-phosphosulfate reductase (APR and sulfite reductase (SiR. Results The inheritance of ATPS, APR and the related 3'-phosphoadenosine 5'-phosphosulfate reductase (PAPR are remarkable, with multiple origins in the lineages that comprise the opisthokonts, different isoforms in chlorophytes and streptophytes, gene fusions with other enzymes of the pathway, evidence a eukaryote to prokaryote lateral gene transfer, changes in substrate specificity and two reversals of cellular location of host- and endosymbiont-originating enzymes. We also found that the ATPS and APR active in the mitochondria of Euglena were inherited from its secondary, green algal plastid. Conclusion Our results reveal a complex history for the enzymes of the sulfate assimilation pathway. Whilst they shed light on the origin of some characterised novelties, such as a recently described novel isoform of APR from Bryophytes and the origin of the pathway active in the mitochondria of Euglenids, the many distinct and novel isoforms identified here represent an excellent resource for detailed biochemical studies of the enzyme structure/function relationships.

  8. Bacterial vaginosis -- aftercare

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/patientinstructions/000687.htm Bacterial vaginosis - aftercare To use the sharing features on this ... to back after you use the bathroom. Preventing Bacterial Vaginosis You can help prevent bacterial vaginosis by: Not ...

  9. Pregnancy Complications: Bacterial Vaginosis

    Science.gov (United States)

    ... Complications & Loss > Pregnancy complications > Bacterial vaginosis and pregnancy Bacterial vaginosis and pregnancy E-mail to a friend Please ... this page It's been added to your dashboard . Bacterial vaginosis (also called BV or vaginitis) is an infection ...

  10. Microbial reduction of iodate

    Science.gov (United States)

    Councell, T.B.; Landa, E.R.; Lovley, D.R.

    1997-01-01

    The different oxidation species of iodine have markedly different sorption properties. Hence, changes in iodine redox states can greatly affect the mobility of iodine in the environment. Although a major microbial role has been suggested in the past to account for these redox changes, little has been done to elucidate the responsible microorganisms or the mechanisms involved. In the work presented here, direct microbial reduction of iodate was demonstrated with anaerobic cell suspensions of the sulfate reducing bacterium Desulfovibrio desulfuricans which reduced 96% of an initial 100 ??M iodate to iodide at pH 7 in 30 mM NaHCO3 buffer, whereas anaerobic cell suspensions of the dissimilatory Fe(III)-reducing bacterium Shewanella putrefaciens were unable to reduce iodate in 30 mM NaHCO3 buffer (pH 7). Both D. desulfuricans and S. putrefaciens were able to reduce iodate at pH 7 in 10 mM HEPES buffer. Both soluble ferrous iron and sulfide, as well as iron monosulfide (FeS) were shown to abiologically reduce iodate to iodide. These results indicate that ferric iron and/or sulfate reducing bacteria are capable of mediating both direct, enzymatic, as well as abiotic reduction of iodate in natural anaerobic environments. These microbially mediated reactions may be important factors in the fate and transport of 129I in natural systems.

  11. Inhibition of synthesis of heparan sulfate by selenate: Possible dependence on sulfation for chain polymerization

    Energy Technology Data Exchange (ETDEWEB)

    Dietrich, C.P.; Nader, H.B. (Paulist School of Medicine, Sao Paulo (Brazil)); Buonassisi, V.; Colburn, P. (W. Alton Jones Cell Science Center, Lake Placid, NY (USA))

    1988-01-01

    Selenate, a sulfation inhibitor, blocks the synthesis of heparan sulfate and chondroitin sulfate by cultured endothelial cells. In contrast, selenate does not affect the production of hyaluronic acid, a nonsulfated glycosaminoglycan. No differences in molecular weight, ({sup 3}H)glucosamine/({sup 35}S)sulfuric acid ratios, or disaccharide composition were observed when the heparan sulfate synthesized by selenate-treated cells was compared with that of control cells. The absence of undersulfated chains in preparations from cultures exposed to selenate supports the concept that, in the intact cell, the polymerization of heparan sulfate might be dependent on the sulfation of the saccharide units added to the growing glycosaminoglycan chain.

  12. Assimilation of terrigenous organic matter via bacterial biomass as a food source for a brackish clam, Corbicula japonica (Mollusca: Bivalva)

    Science.gov (United States)

    Yamanaka, Toshiro; Mizota, Chitoshi; Maki, Yonosuke; Matsumasa, Masatoshi

    2013-07-01

    Corbicula japonica collected from the Kitakami River estuary, northeastern Japan, showed lower δ34S values in soft-body parts (+1.7 to +11.0‰) than the ambient seawater sulfate sulfur (+21‰), and this value gradually decreased at successive sites up to 15.8 km upstream from the river mouth. Previous study using carbon and nitrogen isotopes suggests that the bivalve nonselectively assimilates particulate organic matter of marine and terrestrial origin by filter feeding. This pattern in δ34S values may indicate a considerable contribution of a food source derived from terrigenous organic matter, which has low δ34S values close to 0‰, and the bivalve has been reported to have cellulase and hemicellulase activities. Unique fatty acids (iso 17:0 and anteiso 17:0 acids), both characteristic of sulfate-reducing bacteria, were observed in the salt-free, soft-body parts of the bivalve. The concentration of monounsaturated fatty acids, possibly derived from bacteria, was also high. Trace amounts of a polyunsaturated fatty acid (20:5ω3) specific to dinoflagellates were detected. In Corbicula habitats, reductive sandy layers with ample sulfides that were sporadically intercalated into the oxidative sandy sediment were often observed. The stable isotopic signatures of sediment sulfides (acid-volatile sulfide) and associated pore-water sulfates were -8.9 to +8.6‰ and +22.4 to +26.3‰, respectively, indicating the existence of bacterial sulfate-reducing activity and thiobios biomass. These isotopic signatures of the sediment, with the fatty acid composition of the bivalve, confirm the importance of a food source derived from bacteria belonging to the thiobios in the substrate sediments via pedal feeding, rather than direct digestion of terrigenous organic matter, in this estuarine ecosystem.

  13. Distinguishing iron-reducing from sulfate-reducing conditions

    Science.gov (United States)

    Chapelle, F.H.; Bradley, P.M.; Thomas, M.A.; McMahon, P.B.

    2009-01-01

    Ground water systems dominated by iron- or sulfate-reducing conditions may be distinguished by observing concentrations of dissolved iron (Fe2+) and sulfide (sum of H2S, HS-, and S= species and denoted here as "H2S"). This approach is based on the observation that concentrations of Fe2+ and H2S in ground water systems tend to be inversely related according to a hyperbolic function. That is, when Fe2+ concentrations are high, H2S concentrations tend to be low and vice versa. This relation partly reflects the rapid reaction kinetics of Fe2+ with H2S to produce relatively insoluble ferrous sulfides (FeS). This relation also reflects competition for organic substrates between the iron- and the sulfate-reducing microorganisms that catalyze the production of Fe2+ and H 2S. These solubility and microbial constraints operate in tandem, resulting in the observed hyperbolic relation between Fe2+ and H 2S concentrations. Concentrations of redox indicators, including dissolved hydrogen (H2) measured in a shallow aquifer in Hanahan, South Carolina, suggest that if the Fe2+/H2S mass ratio (units of mg/L) exceeded 10, the screened interval being tapped was consistently iron reducing (H2 ???0.2 to 0.8 nM). Conversely, if the Fe 2+/H2S ratio was less than 0.30, consistent sulfate-reducing (H2 ???1 to 5 nM) conditions were observed over time. Concomitantly high Fe2+ and H2S concentrations were associated with H2 concentrations that varied between 0.2 and 5.0 nM over time, suggesting mixing of water from adjacent iron- and sulfate-reducing zones or concomitant iron and sulfate reduction under nonelectron donor-limited conditions. These observations suggest that Fe2+/H2S mass ratios may provide useful information concerning the occurrence and distribution of iron and sulfate reduction in ground water systems. ?? 2009 National Ground Water Association.

  14. Quantification and control of restrictive ecological factors in acidogenic de-sulfate bioreactor

    Institute of Scientific and Technical Information of China (English)

    王爱杰; 任南琪

    2002-01-01

    As an artificial microbial ecosystem, acidogenic de-sulfate bioreactor has high efficiency of sulfate removal. The restrictive ecological factors, including causing ecological factors, such as COD/SO42- ratio and sulfate loading rate (Ns), and following ecological factors, such as pH value, oxidation reduction potential (ORP) and alkalinity (ALK) have significant effect on the ability and stability of acidogenic de-sulfate bio-reactor. Continuous flow and batch test were carried out to investigate the quantification and control of COD/SO42- ratio, Ns, pH value, ORP and ALK in acidogenic de-sulfate bioreactor supplied with molasses wastewater as sole organic carbon source and sodium sulfate as electron donor. It was demonstrated that In order to maintain high sulfate removal rate (SRR) of 80% to 90%, the restrictive factors should meet all the requirement as follows: kCOD/ SO42- ratio≥2.0, Ns≤7.5 kg (m3·d)-1,pH=5.7~6.2,ORP=-320~-420 mV and ALK=1 500~2 000 mg/L.

  15. Effect of sulfate on low-temperature anaerobic digestion.

    Science.gov (United States)

    Madden, Pádhraig; Al-Raei, Abdul M; Enright, Anne M; Chinalia, Fabio A; de Beer, Dirk; O'Flaherty, Vincent; Collins, Gavin

    2014-01-01

    The effect of sulfate addition on the stability of, and microbial community behavior in, low-temperature anaerobic expanded granular sludge bed-based bioreactors was investigated at 15°C. Efficient bioreactor performance was observed, with chemical oxygen demand (COD) removal efficiencies of >90%, and a mean SO(2-) 4 removal rate of 98.3%. In situ methanogensis appeared unaffected at a COD: SO(2-) 4 influent ratio of 8:1, and subsequently of 3:1, and was impacted marginally only when the COD: SO(2-) 4 ratio was 1:2. Specific methanogenic activity assays indicated a complex set of interactions between sulfate-reducing bacteria (SRB), methanogens and homoacetogenic bacteria. SO(2-) 4 addition resulted in predominantly acetoclastic, rather than hydrogenotrophic, methanogenesis until >600 days of SO(2-) 4-influenced bioreactor operation. Temporal microbial community development was monitored by denaturation gradient gel electrophoresis (DGGE) of 16S rRNA genes. Fluorescence in situ hybridizations (FISH), qPCR and microsensor analysis were combined to investigate the distribution of microbial groups, and particularly SRB and methanogens, along the structure of granular biofilms. qPCR data indicated that sulfidogenic genes were present in methanogenic and sulfidogenic biofilms, indicating the potential for sulfate reduction even in bioreactors not exposed to SO(2-) 4. Although the architecture of methanogenic and sulfidogenic granules was similar, indicating the presence of SRB even in methanogenic systems, FISH with rRNA targets found that the SRB were more abundant in the sulfidogenic biofilms. Methanosaeta species were the predominant, keystone members of the archaeal community, with the complete absence of the Methanosarcina species in the experimental bioreactor by trial conclusion. Microsensor data suggested the ordered distribution of sulfate reduction and sulfide accumulation, even in methanogenic granules.

  16. Evaluating Deterioration of Concrete by Sulfate Attack

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Effects of factors such as water to cement ratio, fly ash and silica fume on the resistance of concrete to sulfate attack were investigated by dry-wet cycles and immersion method. The index of the resistance to sulfate attack was used to evaluate the deterioration degree of concrete damaged by sulfate. The relationship between the resistance of concrete to sulfate attack and its permeability/porosity were analyzed as well as its responding mechanism. Results show that the depth of sulfate crystal attack from surface to inner of concrete can be reduced by decreasing w/c and addition of combining fly ash with silica fume. The variation of relative elastic modulus ratio and relative flexural strength ratio of various specimens before and after being subjected to sulfate attack was compared.

  17. Depolymerization of sulfated polysaccharides under hydrothermal conditions.

    Science.gov (United States)

    Morimoto, Minoru; Takatori, Masaki; Hayashi, Tetsuya; Mori, Daiki; Takashima, Osamu; Yoshida, Shinichi; Sato, Kimihiko; Kawamoto, Hitoshi; Tamura, Jun-ichi; Izawa, Hironori; Ifuku, Shinsuke; Saimoto, Hiroyuki

    2014-01-30

    Fucoidan and chondroitin sulfate, which are well known sulfated polysaccharides, were depolymerized under hydrothermal conditions (120-180°C, 5-60min) as a method for the preparation of sulfated polysaccharides with controlled molecular weights. Fucoidan was easily depolymerized, and the change of the molecular weight values depended on the reaction temperature and time. The degree of sulfation and IR spectra of the depolymerized fucoidan did not change compared with those of untreated fucoidan at reaction temperatures below 140°C. However, fucoidan was partially degraded during depolymerization above 160°C. Nearly the same depolymerization was observed for chondroitin sulfate. These results indicate that hydrothermal treatment is applicable for the depolymerization of sulfated polysaccharides, and that low molecular weight products without desulfation and deformation of the initial glycan structures can be obtained under mild hydrothermal conditions.

  18. Field and laboratory studies of methane oxidation in an anoxic marine sediment: Evidence for a methanogen-sulfate reducer consortium

    Science.gov (United States)

    Hoehler, Tori M.; Alperin, Marc J.; Albert, Daniel B.; Martens, Christopher S.

    1994-12-01

    Field and laboratory studies of anoxic sediments from Cape Lookout Bight, North Carolina, suggest that anaerobic methane oxidation is mediated by a consortium of methanogenic and sulfate-reducing bacteria. A seasonal survey of methane oxidation and CO2 reduction rates indicates that methane production was confined to sulfate-depleted sediments at all times of year, while methane oxidation occurred in two modes. In the summer, methane oxidation was confined to sulfate-depleted sediments and occurred at rates lower than those of CO2 reduction. In the winter, net methane oxidation occurred in an interval at the base of the sulfate-containing zone. Sediment incubation experiments suggest both methanogens and sulfate reducers were responsible for the observed methane oxidation. In one incubation experiment both modes of oxidation were partially inhibited by 2-bromoethanesulfonic acid (a specific inhibitor of methanogens). This evidence, along with the apparent confinement of methane oxidation to sulfate-depleted sediments in the summer, indicates that methanogenic bacteria are involved in methane oxidation. In a second incubation experiment, net methane oxidation was induced by adding sulfate to homogenized methanogenic sediments, suggesting that sulfate reducers also play a role in the process. We hypothesize that methanogens oxidize methane and produce hydrogen via a reversal of CO2 reduction. The hydrogen is efficiently removed and maintained at low concentrations by sulfate reducers. Pore water H2 concentrations in the sediment incubation experiments (while net methane oxidation was occurring) were low enough that methanogenic bacteria could derive sufficient energy for growth from the oxidation of methane. The methanogen-sulfate reducer consortium is consistent not only with the results of this study, but may also be a feasible mechanism for previously documented anaerobic methane oxidation in both freshwater and marine environments.

  19. Biochemical and molecular characterization of potential phosphate-solubilizing bacteria in acid sulfate soils and their beneficial effects on rice growth.

    Directory of Open Access Journals (Sweden)

    Qurban Ali Panhwar

    Full Text Available A study was conducted to determine the total microbial population, the occurrence of growth promoting bacteria and their beneficial traits in acid sulfate soils. The mechanisms by which the bacteria enhance rice seedlings grown under high Al and low pH stress were investigated. Soils and rice root samples were randomly collected from four sites in the study area (Kelantan, Malaysia. The topsoil pH and exchangeable Al ranged from 3.3 to 4.7 and 1.24 to 4.25 cmol(c kg(-1, respectively, which are considered unsuitable for rice production. Total bacterial and actinomycetes population in the acidic soils were found to be higher than fungal populations. A total of 21 phosphate-solubilizing bacteria (PSB including 19 N2-fixing strains were isolated from the acid sulfate soil. Using 16S rRNA gene sequence analysis, three potential PSB strains based on their beneficial characteristics were identified (Burkholderia thailandensis, Sphingomonas pituitosa and Burkholderia seminalis. The isolated strains were capable of producing indoleacetic acid (IAA and organic acids that were able to reduce Al availability via a chelation process. These PSB isolates solubilized P (43.65% existing in the growth media within 72 hours of incubation. Seedling of rice variety, MR 219, grown at pH 4, and with different concentrations of Al (0, 50 and 100 µM was inoculated with these PSB strains. Results showed that the bacteria increased the pH with a concomitant reduction in Al concentration, which translated into better rice growth. The improved root volume and seedling dry weight of the inoculated plants indicated the potential of these isolates to be used in a bio-fertilizer formulation for rice cultivation on acid sulfate soils.

  20. Biochemical and molecular characterization of potential phosphate-solubilizing bacteria in acid sulfate soils and their beneficial effects on rice growth.

    Science.gov (United States)

    Panhwar, Qurban Ali; Naher, Umme Aminun; Shamshuddin, Jusop; Jusop, Shamshuddin; Othman, Radziah; Latif, Md Abdul; Ismail, Mohd Razi

    2014-01-01

    A study was conducted to determine the total microbial population, the occurrence of growth promoting bacteria and their beneficial traits in acid sulfate soils. The mechanisms by which the bacteria enhance rice seedlings grown under high Al and low pH stress were investigated. Soils and rice root samples were randomly collected from four sites in the study area (Kelantan, Malaysia). The topsoil pH and exchangeable Al ranged from 3.3 to 4.7 and 1.24 to 4.25 cmol(c) kg(-1), respectively, which are considered unsuitable for rice production. Total bacterial and actinomycetes population in the acidic soils were found to be higher than fungal populations. A total of 21 phosphate-solubilizing bacteria (PSB) including 19 N2-fixing strains were isolated from the acid sulfate soil. Using 16S rRNA gene sequence analysis, three potential PSB strains based on their beneficial characteristics were identified (Burkholderia thailandensis, Sphingomonas pituitosa and Burkholderia seminalis). The isolated strains were capable of producing indoleacetic acid (IAA) and organic acids that were able to reduce Al availability via a chelation process. These PSB isolates solubilized P (43.65%) existing in the growth media within 72 hours of incubation. Seedling of rice variety, MR 219, grown at pH 4, and with different concentrations of Al (0, 50 and 100 µM) was inoculated with these PSB strains. Results showed that the bacteria increased the pH with a concomitant reduction in Al concentration, which translated into better rice growth. The improved root volume and seedling dry weight of the inoculated plants indicated the potential of these isolates to be used in a bio-fertilizer formulation for rice cultivation on acid sulfate soils.

  1. Methane and sulfate dynamics in sediments from mangrove-dominated tropical coastal lagoons, Yucatan, Mexico

    Science.gov (United States)

    Chuang, P. C.; Young, Megan B.; Dale, Andrew W.; Miller, Laurence G.; Herrera-Silveira, Jorge A.; Paytan, Adina

    2016-01-01

    Porewater profiles in sediment cores from mangrove-dominated coastal lagoons (Celestún and Chelem) on the Yucatán Peninsula, Mexico, reveal the widespread coexistence of dissolved methane and sulfate. This observation is interesting since dissolved methane in porewaters is typically oxidized anaerobically by sulfate. To explain the observations we used a numerical transport-reaction model that was constrained by the field observations. The model suggests that methane in the upper sediments is produced in the sulfate reduction zone at rates ranging between 0.012 and 31 mmol m−2 d−1, concurrent with sulfate reduction rates between 1.1 and 24 mmol SO42− m−2 d−1. These processes are supported by high organic matter content in the sediment and the use of non-competitive substrates by methanogenic microorganisms. Indeed sediment slurry incubation experiments show that non-competitive substrates such as trimethylamine (TMA) and methanol can be utilized for microbial methanogenesis at the study sites. The model also indicates that a significant fraction of methane is transported to the sulfate reduction zone from deeper zones within the sedimentary column by rising bubbles and gas dissolution. The shallow depths of methane production and the fast rising methane gas bubbles reduce the likelihood for oxidation, thereby allowing a large fraction of the methane formed in the sediments to escape to the overlying water column.

  2. DMBT1 functions as pattern-recognition molecule for poly-sulfated and poly-phosphorylated ligands

    DEFF Research Database (Denmark)

    End, Caroline; Bikker, Floris; Renner, Marcus;

    2009-01-01

    Deleted in malignant brain tumors 1 (DMBT1) is a secreted glycoprotein displaying a broad bacterial-binding spectrum. Recent functional and genetic studies linked DMBT1 to the suppression of LPS-induced TLR4-mediated NF-kappaB activation and to the pathogenesis of Crohn's disease. Here, we aimed...... that DMBT1 functions as pattern-recognition molecule for poly-sulfated and poly-phosphorylated ligands providing a molecular basis for its broad bacterial-binding specificity and its inhibitory effects on LPS-induced TLR4-mediated NF-kappaB activation....... at unraveling the molecular basis of its function in mucosal protection and of its broad pathogen-binding specificity. We report that DMBT1 directly interacts with dextran sulfate sodium (DSS) and carrageenan, a structurally similar sulfated polysaccharide, which is used as a texturizer and thickener in human...

  3. The efficacy and safety of high-dose arbekacin sulfate therapy (once-daily treatment) in patients with MRSA infection.

    Science.gov (United States)

    Yamamoto, Yoshihiro; Izumikawa, Koichi; Hashiguchi, Koji; Fukuda, Yuichi; Kobayashi, Tsutomu; Kondo, Akira; Inoue, Yuichi; Morinaga, Yoshitomo; Nakamura, Shigeki; Imamura, Yoshifumi; Miyazaki, Taiga; Kakeya, Hiroshi; Yanagihara, Katsunori; Kohno, Shigeru

    2012-04-01

    The efficacy and safety of once-daily high-dose arbekacin sulfate therapy for methicillin-resistant Staphylococcus aureus (MRSA) infection were evaluated, with analysis of their relationship to blood drug levels. The study was conducted in patients with pneumonia or sepsis, the cause of which was suspected to be MRSA, who were admitted to the Nagasaki University Hospital or its affiliated hospitals between January 2009 and December 2010. The initial drug dose was set at a level expected to yield the goal peak of 20 μg/ml and a trough level of less than 2 μg/ml, using the Habekacin Therapeutic Drug Monitoring analysis software. Thirteen patients were enrolled: 10 patients had pneumonia and 3 patients had sepsis. Patient mean age was 72.0 years; mean initial drug dose was 269.2 mg. Clinical efficacy at completion of treatment and bacterial eradication-reduction were achieved in 66.7% (6/9) and 62.5% (5/8) of patients, respectively. Incidence of adverse reactions was 38.5% (5/13). In analysis of efficacy in relationship to serum drug levels, the peak drug level was 22.7 ± 5.50 μg/ml, on average, and 15 μg/ml or higher in all 6 responders. Also, in patients with renal dysfunction, it seemed to be essential to ensure a certain peak drug level and to control the trough level appropriately. Although the number of patients was limited, once-daily high-dose arbekacin sulfate therapy may be highly effective, without posing any major safety problems. Further larger-scale studies are needed.

  4. Modeling of ferric sulfate decomposition and sulfation of potassium chloride during grate‐firing of biomass

    DEFF Research Database (Denmark)

    Wu, Hao; Jespersen, Jacob Boll; Jappe Frandsen, Flemming

    2013-01-01

    Ferric sulfate is used as an additive in biomass combustion to convert the released potassium chloride to the less harmful potassium sulfate. The decomposition of ferric sulfate is studied in a fast heating rate thermogravimetric analyzer and a volumetric reaction model is proposed to describe th...

  5. Involvement of highly sulfated chondroitin sulfate in the metastasis of the Lewis lung carcinoma cells.

    NARCIS (Netherlands)

    Li, F.; Dam, G.B. ten; Murugan, S.; Yamada, S.; Hashiguchi, T.; Mizumoto, S.; Oguri, K.; Okayama, M.; Kuppevelt, A.H.M.S.M. van; Sugahara, K.

    2008-01-01

    The altered expression of cell surface chondroitin sulfate (CS) and dermatan sulfate (DS) in cancer cells has been demonstrated to play a key role in malignant transformation and tumor metastasis. However, the functional highly sulfated structures in CS/DS chains and their involvement in the process

  6. Discovery of a Heparan sulfate 3- o -sulfation specific peeling reaction

    NARCIS (Netherlands)

    Huang, Yu; Mao, Yang; Zong, Chengli; Lin, Cheng; Boons, Geert Jan; Zaia, Joseph

    2015-01-01

    Heparan sulfate (HS) 3-O-sulfation determines the binding specificity of HS/heparin for antithrombin III and plays a key role in herpes simplex virus (HSV) infection. However, the low natural abundance of HS 3-O-sulfation poses a serious challenge for functional studies other than the two cases ment

  7. Simultaneous degradation of waste phosphogypsum and liquid manure from industrial pig farm by a mixed community of sulfate-reducing bacteria.

    Science.gov (United States)

    Rzeczycka, Marzenna; Miernik, Antoni; Markiewicz, Zdzislaw

    2010-01-01

    The utilization of pig manure as a source of nutrients for the dissimilatory reduction of sulfates present in phosphogypsum was investigated. In both types of media used (synthetic medium and raw pig manure) increased utilization of sulfates with growing COD/SO4(2-)ratio in the medium was observed. The percent of sulfate reduction obtained in synthetic medium was from 18 to 99%, whereas the value for cultures set up in raw liquid manure was from 12% (at COD/SO4(2-) of 0.3) up to as high as 98% (at COD/SO4(2-) equal 3.80). Even with almost complete reduction of sulfates the percent of COD reduction did not exceed 55%. Based on the results obtained it was concluded that the effectiveness of removal of sulfates and organic matter by sulfate-reducing bacteria (SRB) depends to a considerable degree on the proportion between organic matter and sulfates in the purified wastewaters. The optimal COD/SO4(2-)ratio for the removal oforganic matter was between 0.6 and 1.2 whereas the optimal ratio for the removal of sulfates was between 2.4 and 4.8.

  8. A critical role for lymphatic endothelial heparan sulfate in lymph node metastasis

    Directory of Open Access Journals (Sweden)

    Srinivasan R Sathish

    2010-12-01

    Full Text Available Abstract Background Lymph node metastasis constitutes a key event in tumor progression. The molecular control of this process is poorly understood. Heparan sulfate is a linear polysaccharide consisting of unique sulfate-modified disaccharide repeats that allow the glycan to bind a variety of proteins, including chemokines. While some chemokines may drive lymphatic trafficking of tumor cells, the functional and genetic importance of heparan sulfate as a possible mediator of chemokine actions in lymphatic metastasis has not been reported. Results We applied a loss-of-function genetic approach employing lymphatic endothelial conditional mutations in heparan sulfate biosynthesis to study the effects on tumor-lymphatic trafficking and lymph node metastasis. Lymphatic endothelial deficiency in N-deacetylase/N-sulfotransferase-1 (Ndst1, a key enzyme involved in sulfating nascent heparan sulfate chains, resulted in altered lymph node metastasis in tumor-bearing gene targeted mice. This occurred in mice harboring either a pan-endothelial Ndst1 mutation or an inducible lymphatic-endothelial specific mutation in Ndst1. In addition to a marked reduction in tumor metastases to the regional lymph nodes in mutant mice, specific immuno-localization of CCL21, a heparin-binding chemokine known to regulate leukocyte and possibly tumor-cell traffic, showed a marked reduction in its ability to associate with tumor cells in mutant lymph nodes. In vitro modified chemotaxis studies targeting heparan sulfate biosynthesis in lymphatic endothelial cells revealed that heparan sulfate secreted by lymphatic endothelium is required for CCL21-dependent directional migration of murine as well as human lung carcinoma cells toward the targeted lymphatic endothelium. Lymphatic heparan sulfate was also required for binding of CCL21 to its receptor CCR7 on tumor cells as well as the activation of migration signaling pathways in tumor cells exposed to lymphatic conditioned medium

  9. Bacterial β-(1,3)-glucan prevents DSS-induced IBD by restoring the reduced population of regulatory T cells.

    Science.gov (United States)

    Lee, Kwang-Ho; Park, Min; Ji, Kon-Young; Lee, Hwa-Youn; Jang, Ji-Hun; Yoon, Il-Joo; Oh, Seung-Su; Kim, Su-Man; Jeong, Yun-Hwa; Yun, Chul-Ho; Kim, Mi-Kyoung; Lee, In-Young; Choi, Ha-Rim; Ko, Ki-sung; Kang, Hyung-Sik

    2014-10-01

    Bacterial β-(1,3)-glucan has more advantages in terms of cost, yield and efficiency than that derived from mushrooms, plants, yeasts and fungi. We have previously developed a novel and high-yield β-(1,3)-glucan produced by Agrobacterium sp. R259. This study aimed to elucidate the functional mechanism and therapeutic efficacy of bacterial β-(1,3)-glucan in dextran sulfate sodium (DSS)-induced inflammatory bowel disease (IBD).Mice were orally pretreated with bacterial β-(1,3)-glucan at daily doses of 2.5 or 5mg/kg for 2 weeks. After 6 days of DSS treatment, clinical assessment of IBD severity and expression of pro-inflammatory cytokines were evaluated. In vivo cell proliferation was examined by immunohistochemistry using Ki-67 and ER-TR7 antibodies. The frequency of regulatory T cells (Tregs) was analyzed by flow cytometry. Natural killer (NK) activity and IgA level were evaluated using NK cytotoxicity assay and ELISA.The deterioration of body weight gain, colonic architecture, disease score and histological score was recovered in DSS-induced IBD mice when pretreated with bacterial β-(1,3)-glucan. The recruitment of macrophages and the gene expression of proinflammatory cytokines, such as IL-1β, IL-6 and IL-17A/F, were markedly decreased in the colon of β-(1,3)-glucan-pretreated mice. β-(1,3)-Glucan induced the recovery of Tregs in terms of their frequency in DSS-induced IBD mice. Intriguingly, β-(1,3)-glucan reversed the functional defects of NK cells and excessive IgA production in DSS-induced IBD mice.We conclude that bacterial β-(1,3)-glucan prevented the progression of DSS-induced IBD by recovering the reduction of Tregs, functional defect of NK cells and excessive IgA production.

  10. The roles of the micro-organisms and chromium content in the corrosion of iron-chromium steels in the presence of sulfate-reducing bacteria; Role des micro-organismes et de la teneur en chrome dans la corrosion d`aciers fer-chrome en presence de bacteries sulfato-reductrices

    Energy Technology Data Exchange (ETDEWEB)

    Ferrante, V.

    1991-12-01

    Although the ability of sulfate-reducing bacteria to enhance the corrosion of steel is now widely accepted, the actual processes involved in such phenomena are still discussed. This work is dedicated to the study of the exact roles played in corrosion processes firstly, by the presence of D. vulgaris cells and, secondly, by chemical factors such as the material composition and the accumulation of sulfide ions in the solution. The use of microbiological, electrochemical and analytical experimental techniques lead to results that show the interdependence of the bacteria and the material as well as the importance of the steel composition in the adhesion of the micro-organisms and the general corrosion rates. The bacteria cells and dissolved sulfide ions do not markedly influence the general corrosion rates. They however induce surface state modifications that can result in localized corrosion phenomena.

  11. The roles of the micro-organisms and chromium content in the corrosion of iron-chromium steels in the presence of sulfate-reducing bacteria; Roles des micro-organismes et de la teneur en chrome dans la corrosion d'aciers fer-chrome en presence de bacteries sulfato-reductrices

    Energy Technology Data Exchange (ETDEWEB)

    Ferrante, V

    1991-09-15

    If it is widely accepted that the presence of sulfate-reducing bacteria can increase the aqueous corrosion of steels, the induced mechanisms are still not definitively established. The aim of this work is to specify the roles, for corrosion, of the presence of bacteria (D. Vulgaris) in one part and of chemical parameters as the composition of the material and the accumulation of sulfides in another part. The use of experimental techniques coming from microbiology, electrochemistry or chemical analysis has revealed the interdependence which exists between the bacteria and the material, and the importance of the steel composition towards the adhesion of microorganisms and the generalized corrosion. The bacteria and the dissolved sulfides do not seem to influence remarkably the generalized corrosion. Nevertheless, the alterations of the surface state they induce could be the cause of localized corrosion phenomena. (O.M.)

  12. Fucoidans - sulfated polysaccharides of brown algae

    Energy Technology Data Exchange (ETDEWEB)

    Usov, Anatolii I; Bilan, M I [N.D.Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow (Russian Federation)

    2009-08-31

    The methods of isolation of fucoidans and determination of their chemical structures are reviewed. The fucoidans represent sulfated polysaccharides of brown algae, the composition of which varies from simple fucan sulfates to complex heteropolysaccharides. The currently known structures of such biopolymers are presented. A variety of the biological activities of fucoidans is briefly summarised.

  13. Fucoidans — sulfated polysaccharides of brown algae

    Science.gov (United States)

    Usov, Anatolii I.; Bilan, M. I.

    2009-08-01

    The methods of isolation of fucoidans and determination of their chemical structures are reviewed. The fucoidans represent sulfated polysaccharides of brown algae, the composition of which varies from simple fucan sulfates to complex heteropolysaccharides. The currently known structures of such biopolymers are presented. A variety of the biological activities of fucoidans is briefly summarised.

  14. Primary mesenchyme cell migration requires a chondroitin sulfate/dermatan sulfate proteoglycan.

    Science.gov (United States)

    Lane, M C; Solursh, M

    1991-02-01

    Primary mesenchyme cell migration in the sea urchin embryo is inhibited by sulfate deprivation and exposure to exogenous beta-D-xylosides, two treatments known to disrupt proteoglycan synthesis. We show that in the developing sea urchin, exogenous xyloside affects the synthesis by the primary mesenchyme cells of a very large, cell surface chondroitin sulfate/dermatan sulfate proteoglycan. This proteoglycan is present in a partially purified fraction that restores migratory ability to defective cells in vitro. The integrity of this chondroitin sulfate/dermatan sulfate proteoglycan appears essential for primary mesenchyme cell migration since treatment of actively migrating cells with chondroitinase ABC reversibly inhibited their migration in vitro.

  15. Source-receptor relationships between East Asian sulfur dioxide emissions and Northern Hemisphere sulfate concentrations

    Directory of Open Access Journals (Sweden)

    J. Liu

    2008-03-01

    Full Text Available We analyze the effect of varying East Asian (EA sulfur emissions on sulfate concentrations in the Northern Hemisphere, using a global coupled oxidant-aerosol model (MOZART-2. We conduct a base and five sensitivity simulations, in which sulfur emissions from each continent are tagged, to establish the source-receptor (S-R relationship between EA sulfur emissions and sulfate concentrations over source and downwind regions. We find that from west to east across the North Pacific, EA sulfate contributes approximately 80%–20% of sulfate at the surface, but at least 50% at 500 hPa. In addition, EA SO2 emissions account for approximately 30%–50% and 10%–20% of North American background sulfate over the western and eastern US, respectively. The contribution of EA sulfate to the western US at the surface is highest in MAM and JJA, but is lowest in DJF. Reducing EA SO2 emissions will significantly decrease the spatial extent of the EA sulfate influence over the North Pacific both at the surface and at 500 mb in all seasons, but the extent of influence is insensitive to emission increases, particularly in DJF and JJA. We find that EA sulfate concentrations over most downwind regions respond nearly linearly to changes in EA SO2 emissions, but sulfate concentrations over the EA source region increase more slowly than SO2 emissions, particularly at the surface and in winter, due to limited availability of oxidants (mostly H2O2. We find that similar estimates of the S-R relationship for trans-Pacific transport of EA sulfate would be obtained using either sensitivity or tagging techniques. Our findings suggest that future changes in EA sulfur emissions may cause little change in the sulfate induced health impact over downwind continents but SO2 emission reductions may significantly reduce the sulfate related climate cooling over the North Pacific and the United States.

  16. Growth of sulfate reducers in deep-subseafloor sediments stimulated by crustal fluids

    Directory of Open Access Journals (Sweden)

    Katja eFichtel

    2012-02-01

    Full Text Available On a global scale, crustal fluids fuel a substantial part of the deep subseafloor biosphere by providing electron acceptors for microbial respiration. In this study, we examined bacterial cultures from a sediment column of the Juan de Fuca Ridge, Northeast Pacific (IODP Site U1301 which is divided into three distinctive compartments: an upper sulfate-containing zone, formed by bottom-seawater diffusion, a sulfate-depleted zone and a second (~140 m thick sulfate-containing zone influenced by fluid diffusion from the basaltic aquifer. Sulfate reducers were isolated from near-surface and near-basement sediments. All initial enrichments harboured specific communities of heterotrophic microorganisms. Among those, the number of isolated spore-forming Firmicutes decreased from 60% to 21% with sediment depth. Strains affiliated to Desulfosporosinus lacus, Desulfotomaculum sp. and Desulfovibrio aespoeensis were recovered from the upper sediment layers (1.3-9.1 meters below seafloor, mbsf. Several strains of Desulfovibrio indonesiensis and one relative of Desulfotignum balticum were isolated from near-basement sediments (240-262 mbsf. The physiological investigation of strains affiliated to D. aespoeensis, D. indonesiensis and D. balticum indicated that they were all able to use sulfate, thiosulfate and sulfite as electron acceptors. In the presence of sulfate, they grew strain-specifically on a few short-chain n-alcohols and fatty acids, only. The strains fermented either ethanol, pyruvate or betaine. Interestingly, all strains utilized hydrogen and the isolate affiliated to D. indonesiensis even exhibited an autotrophic life-mode. Thus, in the deep subseafloor where organic substrates are limited or hardly degradable, hydrogen might become an essential electron donor. The isolation of non-sporeforming sulfate reducers from fluid-influenced layers indicates that they have survived the long-term burial as active populations even after the separation from

  17. Adaptation of psychrophilic and psychrotrophic sulfate-reducing bacteria to permanently cold marine environments

    DEFF Research Database (Denmark)

    Isaksen, MF; Jørgensen, BB

    1996-01-01

    The potential for sulfate reduction at low temperatures was examined in two different cold marine sediments, Mariager Fjord (Denmark), which is permanently cold (3 to 6 degrees C) but surrounded by seasonally warmer environments, and the Weddell Sea (Antarctica), which is permanently below 0 degr...

  18. Inhibition of hydrogen sulfide, methane, and total gas production and sulfate-reducing bacteria in in vitro swine manure by tannins, with focus on condensed quebracho tannins.

    Science.gov (United States)

    Whitehead, Terence R; Spence, Cheryl; Cotta, Michael A

    2013-09-01

    Management practices from large-scale swine production facilities have resulted in the increased collection and storage of manure for off-season fertilization use. Odor and emissions produced during storage have increased the tension among rural neighbors and among urban and rural residents. Production of these compounds from stored manure is the result of microbial activity of the anaerobic bacteria populations during storage. In the current study, the inhibitory effects of condensed quebracho tannins on in vitro swine manure for reduction of microbial activity and reduced production of gaseous emissions, including the toxic odorant hydrogen sulfide produced by sulfate-reducing bacteria (SRB), was examined. Swine manure was collected from a local swine facility, diluted in anaerobic buffer, and mixed with 1 % w/v fresh feces. This slurry was combined with quebracho tannins, and total gas and hydrogen sulfide production was monitored over time. Aliquots were removed periodically for isolation of DNA to measure the SRB populations using quantitative PCR. Addition of tannins reduced overall gas, hydrogen sulfide, and methane production by greater than 90 % after 7 days of treatment and continued to at least 28 days. SRB population was also significantly decreased by tannin addition. qRT-PCR of 16S rDNA bacteria genes showed that the total bacterial population was also decreased in these incubations. These results indicate that the tannins elicited a collective effect on the bacterial population and also suggest a reduction in the population of methanogenic microorganisms as demonstrated by reduced methane production in these experiments. Such a generalized effect could be extrapolated to a reduction in other odor-associated emissions during manure storage.

  19. Impact of Organic Carbon Electron Donors on Microbial Community Development under Iron- and Sulfate-Reducing Conditions.

    Directory of Open Access Journals (Sweden)

    Man Jae Kwon

    Full Text Available Although iron- and sulfate-reducing bacteria in subsurface environments have crucial roles in biogeochemical cycling of C, Fe, and S, how specific electron donors impact the compositional structure and activity of native iron- and/or sulfate-reducing communities is largely unknown. To understand this better, we created bicarbonate-buffered batch systems in duplicate with three different electron donors (acetate, lactate, or glucose paired with ferrihydrite and sulfate as the electron acceptors and inoculated them with subsurface sediment as the microbial inoculum. Sulfate and ferrihydrite reduction occurred simultaneously and were faster with lactate than with acetate. 16S rRNA-based sequence analysis of the communities over time revealed that Desulfotomaculum was the major driver for sulfate reduction coupled with propionate oxidation in lactate-amended incubations. The reduction of sulfate resulted in sulfide production and subsequent abiotic reduction of ferrihydrite. In contrast, glucose promoted faster reduction of ferrihydrite, but without reduction of sulfate. Interestingly, the glucose-amended incubations led to two different biogeochemical trajectories among replicate bottles that resulted in distinct coloration (white and brown. The two outcomes in geochemical evolution might be due to the stochastic evolution of the microbial communities or subtle differences in the initial composition of the fermenting microbial community and its development via the use of different glucose fermentation pathways available within the community. Synchrotron-based x-ray analysis indicated that siderite and amorphous Fe(II were formed in the replicate bottles with glucose, while ferrous sulfide and vivianite were formed with lactate or acetate. These data sets reveal that use of different C utilization pathways projects significant changes in microbial community composition over time that uniquely impact both the geochemistry and mineralogy of subsurface

  20. ISOLASI DAN IDENTIFIKASI BAKTERI PEREDUKSI SULFAT PADA AREA PERTAMBANGAN BATU BARA MUARA ENIM, SUMATERA SELATAN

    Directory of Open Access Journals (Sweden)

    Muchamad Yusron

    2010-02-01

    Full Text Available Sulfate reducing bacteria utilize sulfate as their terminal electron acceptor and reduce it to sulphide. Acid mine drainage, by-products of mining activities, is an acidic sulfate-rich wastewater suitable habitat for sulfate reducing bacteria. Isolation and identification of sulfate reducing bacteria collected from Muara Enim coal mining, South Sumatra was carried out at Laboratory of Environmental Biotechnology, Indonesian Center for Biodiversity and Biotechnology (ICBB, Bogor, and Laboratory of Microbiology, Faculty of Veterinary, Bogor Agricultural University. Postgate B liquid media was used for isolation and purification via serial dilution. Physiological and biochemical characterization was done based on Bergeys Manual of Determinative Bacteriology. Fifteen pure isolates have been isolated with diverse characteristics. Eight isolates can sustain at pH 3, while the rest sustain at pH 4 or above. Sulfate reduction efficiency of each isolates were different, but increased as the pH increased. The bacteria are classified as Desulfovibrio sp., which is characterized straight rods, motile, non spore-forming and able to grow in simple organic carbon.

  1. Poverty Reduction

    OpenAIRE

    Ortiz, Isabel

    2007-01-01

    The paper reviews poverty trends and measurements, poverty reduction in historical perspective, the poverty-inequality-growth debate, national poverty reduction strategies, criticisms of the agenda and the need for redistribution, international policies for poverty reduction, and ultimately understanding poverty at a global scale. It belongs to a series of backgrounders developed at Joseph Stiglitz's Initiative for Policy Dialogue.

  2. Preparation of Barley Storage Protein, Hordein, for Analytical Sodium Dodecyl Sulfate-Polyacrylamide Gel Electrophoresis

    DEFF Research Database (Denmark)

    Doll, Hans; Andersen, Bente

    1981-01-01

    The extraction, reduction, and alkylation of barley hordein for routine electrophoresis in sodium dodecyl sulfate-polyacrylamide gels were studied to set up a simple preparation procedure giving well-resolved bands in the electrophoresis gel. Hordein was extracted from single crushed seeds or flour...... by aqueous 50% propan-2-ol containing a Tris-borate buffer, pH 8.6. The presence of the buffer facilitates the consecutive complete reduction of the extracted protein in the alcohol. Reduction and alkylation in the buffer containing propan-2-ol give sharper bands in the electrophoresis than reduction...

  3. High aerosol acidity despite declining atmospheric sulfate concentrations over the past 15 years

    Science.gov (United States)

    Weber, Rodney J.; Guo, Hongyu; Russell, Armistead G.; Nenes, Athanasios

    2016-04-01

    Particle acidity affects aerosol concentrations, chemical composition and toxicity. Sulfate is often the main acid component of aerosols, and largely determines the acidity of fine particles under 2.5 μm in diameter, PM2.5. Over the past 15 years, atmospheric sulfate concentrations in the southeastern United States have decreased by 70%, whereas ammonia concentrations have been steady. Similar trends are occurring in many regions globally. Aerosol ammonium nitrate concentrations were assumed to increase to compensate for decreasing sulfate, which would result from increasing neutrality. Here we use observed gas and aerosol composition, humidity, and temperature data collected at a rural southeastern US site in June and July 2013 (ref. ), and a thermodynamic model that predicts pH and the gas-particle equilibrium concentrations of inorganic species from the observations to show that PM2.5 at the site is acidic. pH buffering by partitioning of ammonia between the gas and particle phases produced a relatively constant particle pH of 0-2 throughout the 15 years of decreasing atmospheric sulfate concentrations, and little change in particle ammonium nitrate concentrations. We conclude that the reductions in aerosol acidity widely anticipated from sulfur reductions, and expected acidity-related health and climate benefits, are unlikely to occur until atmospheric sulfate concentrations reach near pre-anthropogenic levels.

  4. Airway responses to sulfate and sulfuric acid aerosols in asthmatics. An exposure-response relationship.

    Science.gov (United States)

    Utell, M J; Morrow, P E; Speers, D M; Darling, J; Hyde, R W

    1983-09-01

    Epidemiologic studies support an association between elevated levels of sulfates and increased symptoms in asthmatics. To determine if these pollutants produce airway responses, 17 asthmatics inhaled the following sulfates: sodium bisulfate, ammonium sulfate, ammonium bisulfate (NH4HSO4), or sulfuric acid (H2SO4) aerosols with an aerodynamic diameter of 0.80 micron at concentrations of 100 micrograms/m3, 450 micrograms/m3, and 1,000 micrograms/m3. A sodium chloride (NaCl) aerosol of similar characteristics, administered by double-blind randomization, served as a control. Subjects breathed these aerosols for a 16-minute period via a mouthpiece. Deposition studies showed 54 to 65% retention of the inhaled aerosols. At the 1,000 micrograms/m3 concentration, the Threshold Limit Value for occupational exposure, H2SO4 and NH4HSO4 inhalation produced significant reductions in specific airway conductance (SGaw) (p less than 0.05) and forced expiratory volume in one second (p less than 0.01) compared with NaCl or pre-exposure values. At the 450 micrograms/m3 concentration, only H2SO4 inhalation produced a significant reduction in SGaw (p less than 0.01). At 100 micrograms/m3, a level 3 to 5 times greater than peak urban levels, no significant change in airway function occurred after any sulfate exposure. These data indicate that asthmatics demonstrate bronchoconstriction after brief exposure to common acidic sulfate pollutants.

  5. Inhibitory concentrations of 2,4D and its possible intermediates in sulfate reducing biofilms

    Energy Technology Data Exchange (ETDEWEB)

    Garcia-Cruz, Ulises [Department of Biotechnology, Environmental Science and Technology, Universidad Autonoma Metropolitana-Iztapalapa, Ave. San Rafael Atlixco 186, Vicentina, 09340 D.F. (Mexico); Celis, Lourdes B. [Division de Ciencias Ambientales, Instituto Potosino de Investigacion Cientifica y Tecnologica, Camino a la Presa San Jose 2055, Lomas 4a. Seccion, 78216 San Luis Potosi, S.L.P. (Mexico); Poggi, Hector [Department of Biotechnology and Bioengineering, CINVESTAV, Av. Instituto Politecnico Nacional 2508, Col. San Pedro Zacatenco, 07360 D.F. (Mexico); Meraz, Monica, E-mail: meraz@xanum.uam.mx [Department of Biotechnology, Environmental Science and Technology, Universidad Autonoma Metropolitana-Iztapalapa, Ave. San Rafael Atlixco 186, Vicentina, 09340 D.F. (Mexico)

    2010-07-15

    Different concentrations of the herbicide 2,4-dichlorophenoxyacetic acid (2,4D) and its possible intermediates such as 2,4-dichlorophenol (2,4DCP), 4-chlorophenol (4CP), 2-chlorophenol (2CP) and phenol, were assayed to evaluate the inhibitory effect on sulfate and ethanol utilization in a sulfate reducing biofilm. Increasing concentrations of the chlorophenolic compounds showed an adverse effect on sulfate reduction rate and ethanol conversion to acetate, being the intermediate 2,4DCP most toxic than the herbicide. The monochlorophenol 4CP (600 ppm) caused the complete cessation of sulfate reduction and ethanol conversion. The ratio of the electron acceptor to the electron donor utilized as well as the sulfate utilization volumetric rates, diminished when chlorophenols and phenol concentrations were increased, pointing out to the inhibition of the respiratory process and electrons transfer. The difference found in the IC{sub 50} values obtained was due to the chemical structure complexity of the phenolic compounds, the number of chlorine atoms as much as the chlorine atom position in the phenol ring. The IC{sub 50} values (ppm) indicated that the acute inhibition on the biofilm was caused by 2,4DCP (17.4) followed by 2,4D (29.0), 2CP (99.8), 4CP (108.0) and phenol (143.8).

  6. The ecophysiology of sulfur isotope fractionation by sulfate reducing bacteria in response to variable environmental conditions

    Science.gov (United States)

    Leavitt, W.; Bradley, A. S.; Johnston, D. T.; Pereira, I. A. C.; Venceslau, S.; Wallace, C.

    2014-12-01

    Microbial sulfate reducers (MSR) drive the Earth's biogeochemical sulfur cycle. At the heart of this energy metabolism is a cascade of redox transformations coupling organic carbon and/or hydrogen oxidation to the dissimilatory reduction of sulfate to sulfide. The sulfide produced is depleted in the heavier isotopes of sulfur relative to sulfate. The magnitude of discrimination (fractionation) depends on: i) the cell-specific sulfate reduction rate (csSRR, Kaplan & Rittenberg (1964) Can. J. Microbio.; Chambers et al. (1975) Can. J. Microbio; Sim et al. (2011) GCA; Leavitt et al. (2013) PNAS), ii) the ambient sulfate concentration (Harrison & Thode (1958) Research; Habicht et al. (2002) Science; Bradley et al. in review), iii) both sulfate and electron donor availability, or iv) an intrinsic physiological limitation (e.g. cellular division rate). When neither sulfate nor electron donor limits csSRR a more complex function relates the magnitude of isotope fractionation to cell physiology and environmental conditions. In recent and on-going work we have examined the importance of enzyme-specific fractionation factors, as well as the influence of electron donor or electron acceptor availability under carefully controlled culture conditions (e.g. Leavitt et al. (2013) PNAS). In light of recent advances in MSR genetics and biochemistry we utilize well-characterized mutant strains, along with a continuous-culture methodology (Leavitt et al. (2013) PNAS) to further probe the fractionation capacity of this metabolism under controlled physiological conditions. We present our latest findings on the magnitude of S and D/H isotope fractionation in both wild type and mutant strains. We will discuss these in light of recent theoretical advances (Wing & Halevy (2014) PNAS), examining the mode and relevance of MSR isotope fractionation in the laboratory to modern and ancient environmental settings, particularly anoxic marine sediments.

  7. Electron-bifurcating transhydrogenase is central to hydrogen isotope fractionation during lipid biosynthesis in sulfate reducing bacteria

    Science.gov (United States)

    Leavitt, W.; Flynn, T. M.; Suess, M.; Bradley, A. S.

    2015-12-01

    A significant range in microbial lipid 2H/1H ratios is observed in modern marine sediments [Li et al. 2009. GCA]. The magnitude of hydrogen isotope fractionation between microbial lipids and growth water (2ɛlipid-H2O) is hypothesized to relate to the central carbon and energy metabolism [Zhang et al. 2009. PNAS]. These observations have raised the intriguing possibility for culture independent identification of the dominant metabolic pathways operating in environments critical to the geological record. One such metabolism we would like to track for its global significance in sedimentary carbon cycling is bacterial sulfate reduction [Jørgensen. 1982. Nature]. To-date, heterotrophic sulfate reducing bacteria (SRB) have been observed to produce lipids that are depleted in fatty acid H-isotope composition, relative to growth water (2ɛlipid-H2O ~ -125 to -175 ‰), with experiments on different substrates yielding little variability [Campbell et al. 2009. GCA; Osburn. 2013; Dawson et al. 2015. Geobiology]. In stark contrast, aerobic heterotrophs show a wide range in fractionations (2ɛlipid-H2O ~ +300 to -125‰) which seems to scale with the route cellular carbon metabolism [Zhang et al. 2009. PNAS; Heinzelmann et al. 2015. Front Microbio]. Recent work in aerobic methylotrophs [Bradley et al. 2014. AGU] implicates transhydrogenase (TH) activity as a critical control on 2ɛlipid-H2O. This work suggests a specific driving mechanism for this range in fractionation is the ratio of intracellular NADPH/NADH, and more fundamentally, the intracellular redox state. In SRB a key component of energy metabolism is the activity of electron-bifurcating TH [Price et al. 2014. Front Microbio], for which a recent transposon mutant library has generated a number of knockouts in the target gene [Kuehl et al. 2014. mBio] in the model organism Desulfovibrio alaskensis strain G20. In this study we compare growth rates, fatty acid concentrations and 2ɛlipid-H2O from wild type and TH

  8. Isolation and characterization of a mesophilic heavy-metals-tolerant sulfate-reducing bacterium Desulfomicrobium sp. from an enrichment culture using phosphogypsum as a sulfate source.

    Science.gov (United States)

    Azabou, Samia; Mechichi, Tahar; Patel, Bharat K C; Sayadi, Sami

    2007-02-09

    A sulfate-reducing bacterium, was isolated from a 6 month trained enrichment culture in an anaerobic media containing phosphogypsum as a sulfate source, and, designated strain SA2. Cells of strain SA2 were rod-shaped, did not form spores and stained Gram-negative. Phylogenetic analysis of the 16S rRNA gene sequence of the isolate revealed that it was related to members of the genus Desulfomicrobium (average sequence similarity of 98%) with Desulfomicrobium baculatum being the most closely related (sequence similarity of 99%). Strain SA2 used thiosulfate, sulfate, sulfite and elemental sulfur as electron acceptors and produced sulfide. Strain SA2 reduced sulfate contained in 1-20g/L phosphogypsum to sulfide with reduction of sulfate contained in 2g/L phosphogypsum being the optimum concentration. Strain SA2 grew with metalloid, halogenated and non-metal ions present in phosphogypsum and with added high concentrations of heavy metals (125ppm Zn and 100ppm Ni, W, Li and Al). The relative order for the inhibitory metal concentrations, based on the IC(50) values, was Cu, Te>Cd>Fe, Co, Mn>F, Se>Ni, Al, Li>Zn.

  9. Investigation of Sulfate concentration influence on Anaerobic Lagoon performance: Birjand Wastewater Treatment plant: A Case study

    Directory of Open Access Journals (Sweden)

    Mohammad Malakootian

    2016-05-01

    Full Text Available Background and Aim: In the present study the influence of the different sulfate concentration on the anaerobic lagoon stabilization was investigated. Materials and Methods: The present study is an experimental research carried out on anaerobic stabilization pond pilot for 7 months in Birjand wastewater treatment plant. After making sure of a steady state sulfate with different concentrations of 200, 300 and 400 mg/L were injected into the pilot. Then parameters including pH, organic nitrogen, ammonia nitrogen, BOD5, COD and nitrate were measured. All of the experiments were carried out according to the methods presented in the book "Standard Method" for the examination of water and wastewater (2005. Results: It was found that by increasing sulfate concentration from 200 to 300 mg/L all of parameters  except BOD5 (10% reduction had no significant changes., but by increasing the sulfate concentration from 200 to 400 mg/L the removal efficiency of the parameters such as BOD5, COD, Organic nitrogen, total kjeldahl nitrogen, nitrate and sulfate reduced to 11, 8, 12, 26, 6 and 10 percent, respectively. PH in the first stage was alkaline and then changed to acidic. Conclusion: Anaerobic stabilization ponds have different capacities for removal of organic compounds at different sulfate concentrations; so that; in sulfate concentration of 200 mg/L, the proper operation was seen and in concentration of 300 mg/L, sulfate-reducing bacteria get dominant and therefore odor is produced..  Alternatively, by increasing the concentration of sulphate to 400 mg/L, ammonia nitrogen increased 2.5 times (150% in the effluent.

  10. Sulfate and chromate increased each other's uptake and translocation in As-hyperaccumulator Pteris vittata.

    Science.gov (United States)

    de Oliveira, Letúzia M; Gress, Julia; De, Jaysankar; Rathinasabapathi, Bala; Marchi, Giuliano; Chen, Yanshan; Ma, Lena Q

    2016-03-01

    We investigated the effects of chromate (CrVI) and sulfate on their uptake and translocation in As-hyperaccumulator Pteris vittata. Plants were exposed to 1) 0.1 mM CrVI and 0, 0.25, 1.25 or 2.5 mM sulfate or 2) 0.25 mM sulfate and 0, 0.5, 2.5 or 5.0 mM CrVI for 1 d in hydroponics. P. vittata accumulated 26 and 1261 mg kg(-1) Cr in the fronds and roots at CrVI0.1, and 2197 and 1589 mg kg(-1) S in the fronds and roots at S0.25. Increasing sulfate concentrations increased Cr root concentrations by 16-66% and helped CrVI reduction to CrIII whereas increasing CrVI concentrations increased frond sulfate concentrations by 3-27%. Increasing sulfate concentrations enhanced TBARS concentrations in the biomass, indicating oxidative stress caused lipid peroxidation in plant cell membranes. However, addition of 0.25-2.5 mM sulfate alleviated CrVI's toxic effects and decreased TBARS from 23.5 to 9.46-12.3 μmol g(-1) FW. Though CrVI was supplied, 78-96% of CrIII was in the biomass, indicating efficient CrVI reduction to CrIII by P. vittata. The data indicated the amazing ability of P. vittata in Cr uptake at 289 mg kg(-1) h(-1) with little translocation to the fronds. These results indicated that P. vittata had potential in Cr phytoremediation in contaminated sites but further studies are needed to evaluate this potential. The facts that CrVI and sulfate helped each other in uptake by P. vittata suggest that CrVI was not competing with sulfate uptake in P. vittata. However, the mechanisms of how sulfate and CrVI enhance each other's accumulation in P. vittata need further investigation.

  11. Di-sulfated Keratan Sulfate as a Novel Biomarker for Mucopolysaccharidosis II, IVA, and IVB.

    Science.gov (United States)

    Shimada, Tsutomu; Tomatsu, Shunji; Mason, Robert W; Yasuda, Eriko; Mackenzie, William G; Hossain, Jobayer; Shibata, Yuniko; Montaño, Adriana M; Kubaski, Francyne; Giugliani, Roberto; Yamaguchi, Seiji; Suzuki, Yasuyuki; Orii, Kenji E; Fukao, Toshiyuki; Orii, Tadao

    2015-01-01

    Keratan sulfate (KS) is a storage material in mucopolysaccharidosis IV (MPS IV). However, no detailed analysis has been reported on subclasses of KS: mono-sulfated KS and di-sulfated KS. We established a novel method to distinguish and quantify mono- and di-sulfated KS using liquid chromatography-tandem mass spectrometry and measured both KS levels in various specimens.Di-sulfated KS was dominant in shark cartilage and rat serum, while mono-sulfated KS was dominant in bovine cornea and human serum. Levels of both mono- and di-sulfated KS varied with age in the blood and urine from control subjects and patients with MPS II and IVA. The mean levels of both forms of KS in the plasma/serum from patients with MPS II, IVA, and IVB were elevated compared with that in age-matched controls. Di-sulfated KS provided more significant difference between MPS IVA and the age-matched controls than mono-sulfated KS. The ratio of di-sulfated KS to total KS in plasma/serum increased with age in control subjects and patients with MPS II but was age independent in MPS IVA patients. Consequently, this ratio can discriminate younger MPS IVA patients from controls. Levels of mono- and di-sulfated KS in urine of MPS IVA and IVB patients were all higher than age-matched controls for all ages studied.In conclusion, the level of di-sulfated KS and its ratio to total KS can distinguish control subjects from patients with MPS II, IVA, and IVB, indicating that di-sulfated KS may be a novel biomarker for these disorders.

  12. Using Terrestrial Sulfate Efflorescences as an Analogue of Hydrated Sulfate Formation in Valles Marineris on Mars

    Science.gov (United States)

    Smith, P. C.; Szynkiewicz, A.

    2015-12-01

    Hydrated sulfate minerals provide conclusive evidence that a hydrologic cycle was once active on the surface of Mars. Two classes of hydrated sulfate minerals have been detected by robotic instruments on Mars: monohydrated sulfate minerals comprised of kieserite and gypsum, and various polyhydrated sulfates with Fe-Ca-Na-Mg-rich compositions. These minerals are found in various locations on Mars, including large surface exposures in valley settings of Valles Marineris. However, the sulfate sources and formation mechanisms of these minerals are not yet well understood.Recently, it has been suggested that the sulfate minerals in Valles Marineris might have formed in a manner similar to sulfate efflorescences found in dry environments on Earth. In this study, we use sulfate effloresences from the Rio Puerco Watershed, New Mexico as a terrestrial analogue to assess major factors that might have led to deposition of sulfate minerals in Valles Marineris. In different seasons indicative of dry and wet conditions, we collected field photographs and sediment samples for chemical and stable isotopic analyses (sulfur content, δ34S) to determine major sources of sulfate ions for efflorescences and to assess how the seasonal changes in surface/groundwater activity affect their formation. Preliminary sulfur isotope results suggest that oxidation of bedrock sulfides (0.01-0.05 wt. S %) is a major source of sulfate ion for efflorescences formation because their δ34S varied in negative range (-28 to -20‰) similar to sulfides (average -32‰). Using field photographs collected in Oct 2006, Feb and Nov 2012, May 2013, Mar and Oct 2014, we infer that the highest surface accumulation of sulfate efflorescences in the studied analog site was observed after summer monsoon seasons when more water was available for surface and subsurface transport of solutes from chemical weathering. Conversely, spring snow melt led to enhanced dissolution of sulfate efflorescences.

  13. Study of cadmium electrochemical deposition in sulfate medium

    Energy Technology Data Exchange (ETDEWEB)

    Montiel, T.; Solorza, O.; Sanchez, H.

    2000-03-01

    The cadmium electrochemical deposition process from sulfate medium was studied by means of different electrochemical techniques in both stationary and nonstationary diffusion regimes. The kinetics of the electrochemical reduction of cadmium on solid cadmium electrodes was examined and the kinetic parameters are presented, as well as the diffusion coefficient derived from the different techniques. Temperature has an important effect on the cadmium reduction kinetics, and the activation energy of the process was evaluated. The electrochemical deposition of cadmium is a complex process due to the coexistence of adsorption and nucleation processes; the adsorbed electroactive species appears to be Cd{sup +2}, and a mechanism for cadmium electrodeposition on solid cadmium electrodes is proposed.

  14. Sulfated binary and trinary oxide solid superacids

    Institute of Scientific and Technical Information of China (English)

    缪长喜; 华伟明; 陈建民; 高滋

    1996-01-01

    A series of sulfated binary and trinary oxide solid superacids were prepared, and their catalytic activities for n-butane isomerization at low temperature were measured. The incorporation of different metal oxides into ZrO2 may produce a positive or negative effect on the acid strength and catalytic activity of the solid superacids. Sulfated oxides of Cr-Zr, Fe-Cr-Zr and Fe-V-Zr are 2 - 3 times more active than the reported sulfated Fe-Mn-Zr oxide. The enhancement in the superacidity and catalytic activity of these new solid superacids has been discussed on account of the results of various characteriation techniques.

  15. Analysis of tyrosine-O-sulfation

    DEFF Research Database (Denmark)

    Bundgaard, J.R.; Sen, J.W.; Johnsen, A.H.

    2008-01-01

    Tyrosine O-sulfation was first described about 50 years ago as a post-translational modification of fibrinogen. In the following 30 years it was considered to be a rare modification affecting only a few proteins and peptides. However, in the beginning of the 1980s tyrosine (Tyr) sulfation was shown...... the presence of radioactively labeled tyrosine. These techniques have been described in detail previously. The aim of this chapter is to present alternative analytical methods of Tyr sulfation than radioisotope incorporation before analysis Udgivelsesdato: 2008...

  16. Chlorate: a reversible inhibitor of proteoglycan sulfation

    Energy Technology Data Exchange (ETDEWEB)

    Humphries, D.E.; Silbert, J.E.

    1988-07-15

    Bovine aorta endothelial cells were cultured in medium containing (/sup 3/H)glucosamine, (/sup 35/S)sulfate, and various concentrations of chlorate. Cell growth was not affected by 10 mM chlorate, while 30 mM chlorate had a slight inhibitory effect. Chlorate concentrations greater than 10 mM resulted in significant undersulfation of chondroitin. With 30 mM chlorate, sulfation of chondroitin was reduced to 10% and heparan to 35% of controls, but (/sup 3/H)glucosamine incorporation on a per cell basis did not appear to be inhibited. Removal of chlorate from the culture medium of cells resulted in the rapid resumption of sulfation.

  17. Stratospheric sulfate geoengineering impacts on global agriculture

    Science.gov (United States)

    Xia, L.; Robock, A.; Lawrence, P.; Lombardozzi, D.

    2015-12-01

    Stratospheric sulfate geoengineering has been proposed to reduce the impacts of anthropogenic climate change. If it is ever used, it would change agricultural production, and so is one of the future climate scenarios for the third phase of the Global Gridded Crop Model Intercomparison. As an example of those impacts, we use the Community Land Model (CLM-crop 4.5) to simulate how climate changes from the G4 geoengineering scenario from the Geoengineering Modeling Intercomparison Project. The G4 geoengineering scenario specifies, in combination with RCP4.5 forcing, starting in 2020 daily injections of a constant amount of SO2 at a rate of 5 Tg SO2 per year at one point on the Equator into the lower stratosphere. Eight climate modeling groups have completed G4 simulations. We use the crop model to simulate the impacts of climate change (temperature, precipitation, and solar radiation) on the global agriculture system for five crops - rice, maize, soybeans, cotton, and sugarcane. In general, without irrigation, compared with the reference run (RCP4.5), global production of cotton, rice and sugarcane would increase significantly due to the cooling effect. Maize and soybeans show different regional responses. In tropical regions, maize and soybean have a higher yield in G4 compared with RCP4.5, while in the temperate regions they have a lower yield under a geoengineered climate. Impacts on specific countries in terms of different crop production depend on their locations. For example, the United States and Argentina show soybean production reduction of about 15% under G4 compared to RCP4.5, while Brazil increases soybean production by about 10%.

  18. Sulfate-reducing bacteria colonize pouches formed for ulcerative colitis but not for familial adenomatous polyposis.

    LENUS (Irish Health Repository)

    Duffy, M

    2012-02-03

    PURPOSE: Ileal pouch-anal anastomosis remains the "gold standard" in surgical treatment of ulcerative colitis and familial adenomatous polyposis. Pouchitis occurs mainly in patients with a background of ulcerative colitis, although the reasons for this are unknown. The aim of this study was to characterize differences in pouch bacterial populations between ulcerative colitis and familial adenomatous pouches. METHODS: After ethical approval was obtained, fresh stool samples were collected from patients with ulcerative colitis pouches (n = 10), familial adenomatous polyposis (n = 7) pouches, and ulcerative colitis ileostomies (n = 8). Quantitative measurements of aerobic and anaerobic bacteria were performed. RESULTS: Sulfate-reducing bacteria were isolated from 80 percent (n = 8) of ulcerative colitis pouches. Sulfate-reducing bacteria were absent from familial adenomatous polyposis pouches and also from ulcerative colitis ileostomy effluent. Pouch Lactobacilli, Bifidobacterium, Bacteroides sp, and Clostridium perfringens counts were increased relative to ileostomy counts in patients with ulcerative colitis. Total pouch enterococci and coliform counts were also increased relative to ileostomy levels. There were no significant quantitative or qualitative differences between pouch types when these bacteria were evaluated. CONCLUSIONS: Sulfate-reducing bacteria are exclusive to patients with a background of ulcerative colitis. Not all ulcerative colitis pouches harbor sulfate-reducing bacteria because two ulcerative colitis pouches in this study were free of the latter. They are not present in familial adenomatous polyposis pouches or in ileostomy effluent collected from patients with ulcerative colitis. Total bacterial counts increase in ulcerative colitis pouches after stoma closure. Levels of Lactobacilli, Bifidobacterium, Bacteroides sp, Clostridium perfringens, enterococci, and coliforms were similar in both pouch groups. Because sulfate-reducing bacteria are

  19. Sulfated cellulose thin films with antithrombin affinity

    Directory of Open Access Journals (Sweden)

    2009-11-01

    Full Text Available Cellulose thin films were chemically modified by in situ sulfation to produce surfaces with anticoagulant characteristics. Two celluloses differing in their degree of polymerization (DP: CEL I (DP 215–240 and CEL II (DP 1300–1400 were tethered to maleic anhydride copolymer (MA layers and subsequently exposed to SO3•NMe3 solutions at elevated temperature. The impact of the resulting sulfation on the physicochemical properties of the cellulose films was investigated with respect to film thickness, atomic composition, wettability and roughness. The sulfation was optimized to gain a maximal surface concentration of sulfate groups. The scavenging of antithrombin (AT by the surfaces was determined to conclude on their potential anticoagulant properties.

  20. ROE Wet Sulfate Deposition 2009-2011

    Data.gov (United States)

    U.S. Environmental Protection Agency — The raster data represent the amount of wet sulfate deposition in kilograms per hectare from 2009 to 2011. Summary data in this indicator were provided by EPA’s...

  1. Molecular Characterization of Wetland Soil Bacterial Community in Constructed Mesocosms

    Science.gov (United States)

    2006-06-01

    characterize the soil bacterial community, pre-PCE injection, among three wetland plant species from the sedge family ( Cyperaceae ) within constructed...community among three wetland plant species from the sedge family ( Cyperaceae ) within a constructed reductive dechlorination wetland and to identify...injection, among three wetland plant species from the sedge family ( Cyperaceae ) within constructed wetland mesocosms and to identify any bacterial dominance

  2. Sulfate Resistance of Alkali Activated Pozzolans

    OpenAIRE

    Bondar, Dali

    2015-01-01

    The consequence of sulfate attack on geopolymer concrete, made from an alkali activated natural pozzolan (AANP) has been studied in this paper. Changes in the compressive strength, expansion and capillary water absorption of specimens have been investigated combined with phases determination by means of X-ray diffraction. At the end of present investigation which was to evaluate the performance of natural alumina silica based geopolymer concrete in sodium and magnesium sulfate solution, the l...

  3. Survival of bacterial indicators and the functional diversity of native microbial communities in the Floridan aquifer system, south Florida

    Science.gov (United States)

    Lisle, John T.

    2014-01-01

    model than when exposed to groundwater from the APPZ (range: 0.540–0.684 h-1). The inactivation rates for the first phase of the models for P. aeruginosa were not significantly different between the UFA (range: 0.144–0.770 h-1) and APPZ (range: 0.159–0.772 h-1) aquifer zones. The inactivation rates for the second phase of the model for this P. aeruginosa were also similar between UFA (range: 0.003–0.008 h-1) and APPZ (0.004–0.005 h-1) zones, although significantly slower than the model’s first phase rates for this bacterial species. Geochemical data were used to determine which dissimilatory biogeochemical reactions were most likely to occur under the native conditions in the UFA and APPZ zones using thermodynamics principles to calculate free energy yields and other cell-related energetics data. The biogeochemical processes of acetotrophic and hydrogenotrophic sulfate reduction, methanogenesis and anaerobic oxidation of methane dominated in all six groundwater sites. A high throughput DNA microarray sequencing technology was used to characterize the diversity in the native aquifer bacterial communities (bacteria and archaea) and assign putative physiological capabilities to the members of those communities. The bacterial communities in both zones of the aquifer were shown to possess the capabilities for primary and secondary fermentation, acetogenesis, methanogenesis, anaerobic methane oxidation, syntrophy with methanogens, ammonification, and sulfate reduction. The data from this study provide the first determination of bacterial indicator survival during exposure to native geochemical conditions of the Floridan aquifer in south Florida. Additionally, the energetics and functional bacterial diversity characterizations are the first descriptions of native bacterial communities in this region of the Floridan aquifer and reveal how these communities persist under such extreme conditions. Collectively, these types of data can be used to develop and refine

  4. Is there a correlation between structure and anticoagulant action of sulfated galactans and sulfated fucans?

    Science.gov (United States)

    Pereira, Mariana S; Melo, Fábio R; Mourão, Paulo A S

    2002-10-01

    We attempted to identify the specific structural features in sulfated galactans and sulfated fucans that confer anticoagulant activity. For this study we employed a variety of invertebrate polysaccharides with simple structures composed of well-defined units of oligosaccharides. Our results indicate that a 2-O-sulfated, 3-linked alpha-L-galactan, but not a alpha-L-fucan with a similar molecular size, is a potent thrombin inhibitor mediated by antithrombin or heparin cofactor II. The difference between the activities of these two polysaccharides is not very pronounced when factor Xa replaced thrombin. The occurrence of 2,4-di-O-sulfated units is an amplifying motif for 3-linked alpha-fucan-enhanced thrombin inhibition by antithrombin. If we replace antithrombin by heparin cofactor II, then the major structural requirement for the activity becomes single 4-O-sulfated fucose units. The presence of 2-O-sulfated fucose residues always had a deleterious effect on anticoagulant activity. Overall, our results indicate that the structural requirements for interaction of sulfated galactans and sulfated fucans with coagulation cofactors and their target proteases are stereospecific and not merely a consequence of their charge density and sulfate content.

  5. Characterization, antioxidant and cytotoxic activity of sulfated derivatives of a water-insoluble polysaccharides from Dictyophora indusiata.

    Science.gov (United States)

    Deng, Chao; Xu, Jingjing; Fu, Haitian; Chen, Jinghua; Xu, Xin

    2015-04-01

    The present study described the characterization and biological properties of water‑soluble sulfated polysaccharides prepared from water‑insoluble polysaccharide (DIP), which were extracted from Dictyophora indusiata. The sulfation of DIP was performed using the chlorosulfonic acid‑pyridine method. The water solubilities of the sulfated derivatives were measured at room temperature according to the Chinese Pharmacopoeia. The scavenging activity of hydroxyl radicals and 1,1‑diphenyl‑2‑picrylhydrazyl (DPPH) as determined, together with the reduction ability of the sulfated polysaccharides. The cytotoxic and antiproliferative effects of DIP and the sulfated derivatives on MCF‑7 and B16 cells were then determined using an MTT assay. The substitution degrees of the sulfated polysaccharides were 0.584 (S1‑DIP), 0.989 (S2‑DIP) and 1.549 (S3‑DIP) according to barium chloride‑gelatin nephelometry. Infrared spectroscopy and 13C‑nuclear magnetic resonance indicated that the substitution of S‑DIP occurred mainly at the C‑6 position, followed by the C‑4 and C‑2 positions. A significant increase was noted in the antioxidant activity of the sulfated derivatives compared with that of DIP. In addition, the S‑DIPs exhibited a more marked reducing capacity and clearing activity of hydroxyl radicals and DPPH. This indicated that the antioxidant capacity of the polysaccharides was significantly higher following sulfation. Furthermore, in in vitro cell investigations, DIP exhibited no inhibitory effects on the growth of the B16 or MCF‑7 tumor cells. However, the sulfated derivatives exerted marked inhibitory effects on these cell lines. Sulfate modification may therefore contribute to an improvement in water solubility and in the antioxidant and antitumor activities of natural DIP.

  6. Hormonal control of sulfate uptake and assimilation.

    Science.gov (United States)

    Koprivova, Anna; Kopriva, Stanislav

    2016-08-01

    Plant hormones have a plethora of functions in control of plant development, stress response, and primary metabolism, including nutrient homeostasis. In the plant nutrition, the interplay of hormones with responses to nitrate and phosphate deficiency is well described, but relatively little is known about the interaction between phytohormones and regulation of sulfur metabolism. As for other nutrients, sulfate deficiency results in modulation of root architecture, where hormones are expected to play an important role. Accordingly, sulfate deficiency induces genes involved in metabolism of tryptophane and auxin. Also jasmonate biosynthesis is induced, pointing to the need of increase the defense capabilities of the plants when sulfur is limiting. However, hormones affect also sulfate uptake and assimilation. The pathway is coordinately induced by jasmonate and the key enzyme, adenosine 5'-phosphosulfate reductase, is additionally regulated by ethylene, abscisic acid, nitric oxid, and other phytohormones. Perhaps the most intriguing link between hormones and sulfate assimilation is the fact that the main regulator of the response to sulfate starvation, SULFATE LIMITATION1 (SLIM1) belongs to the family of ethylene related transcription factors. We will review the current knowledge of interplay between phytohormones and control of sulfur metabolism and discuss the main open questions.

  7. Preparation of Agarose Sulfate and Its Antithrombogenicity

    Institute of Scientific and Technical Information of China (English)

    JIE Youping; ZHANG Lingmin; CHEN Peng; MAO Xuan; TANG Shunqing

    2012-01-01

    As one of the seaweed polysaccharide,agarose has received much attention because of its biocompatibility.However,its application in biomedical field was limited with its biological inertia.Modification with some functional groups is needed to obtain agarose derivatives with biological activity and expand its applications.Consequently,agarose was sulfated with chlorosulfonic acid-pyridine with formamide as dispersing agent.The orthogonal test result showed that the optimal reaction condition was the reaction time being 4 h,the reaction temperature 65 ℃,and the ratio of chlorosulfonic acid to agarose 1-4(mL/g).Two kinds of the insoluble agarose sulfate (below 37 ℃) were synthesized with degree of substitution (DS) being 0.17 and 0.43 respectively.Infrared spectroscopy (IR) and 13C nuclear magnetic resonance (13C-NMR) spectroscopy results proved that C3-6 in agarose was sulfated.Their hydrophobic property and BSA adsorption capacity rose with increasing DS,while the adsorption of Hb was reduced.The anti-clotting properties of agarose sulfate were significantly improved,and agarose sulfate could protect red blood cells from deformation after adsorption of BSA.These findings demonstrate that the cold-water insoluble agarose sulfate has a promise for applications as heparin-like material in anticoagulation or endothelial regeneration scaffold.

  8. Structure of a rat hepatoma heparan sulfate

    Energy Technology Data Exchange (ETDEWEB)

    Fedarko, N.S.; Ishihara, M.; Conrad, H.E.

    1986-05-01

    Previous studies showed that as monolayer cultures of a rat hepatocyte cell line passed from log growth to confluency there was an increase in sulfation of heparan sulfate (HS) and the accumulation of a unique species of HS with a high content of sulfated GlcA residues in the nucleus. The present study compares the HS metabolism of a rat (Morris) hepatoma line. Cells were labeled with /sup 35/SO/sub 4//sup 2 -/ and the structure and distribution of (/sup 35/SO/sub 4/)HS from the culture medium (CM), the pericellular matrix (Ma), the nucleus (NUC), the outer nuclear membrane (NM), and the remaining cytoplasmic (CP) pool was measured as nitrous acid-susceptible material. The amount of label incorporated into each pool was 1/10 that observed in the hepatocyte line. The HS proteglycan and the free HS chains from the hepatoma showed size distributions similar to those found for the hepatocytes, but a lower average charge density. In the HS from the CM, Ma, and CP pools 56% of glucosamine residues were sulfated; in that from the NM and NUC pools 46% were sulfated. HONO treatment gave mono- and disulfated disaccharides in a ratio of 1.5:1 for all five cellular pools, but showed that the HS from the NUC pool did not contain high levels of sulfated GlcA residues.

  9. Ammonium sulfate preparation from phosphogypsum waste

    Directory of Open Access Journals (Sweden)

    Abdel-Hakim T. Kandil

    2017-01-01

    Full Text Available The Egyptian phosphogypsum waste is treated using sulfuric acid prior the ammonium sulfate production. The relevant factors that would affect the removal efficiencies of some impurities are studied. The optimum conditions of the treatment are 8 M sulfuric acid solution and 1/4 solid/liquid ratio for 30 min contact time at 80 °C. Moreover, the optimum conditions of the ammonium sulfate preparation are 10 g of the suspended impure or purified phosphogypsum in 40 ml of 3% ammonium sulfate solution (as initiator, 1/4 solid/liquid ratio at pH7 at an addition of an excess ammonium carbonate, and 150 rpm stirring speed for 4.0 h contact time at 55 °C as well as the 5 mg of barium chloride is added to remove the radium in the ammonium sulfate product. Finally, the ammonium sulfate is crystallized and the chemical analysis of the product shows 20% nitrogen and 23.6% sulfur. Therefore, the purity of the obtained ammonium sulfate is 95% from the purified phosphogypsum.

  10. Effect of sulfate aerosol on tropospheric NOx and ozone budgets: Model simulations and TOPSE evidence

    Science.gov (United States)

    Tie, Xuexi; Emmons, Louisa; Horowitz, Larry; Brasseur, Guy; Ridley, Brian; Atlas, Elliot; Stround, Craig; Hess, Peter; Klonecki, Andrzej; Madronich, Sasha; Talbot, Robert; Dibb, Jack

    2003-02-01

    The distributions of NOx and O3 are analyzed during TOPSE (Tropospheric Ozone Production about the Spring Equinox). In this study these data are compared with the calculations of a global chemical/transport model (Model for OZone And Related chemical Tracers (MOZART)). Specifically, the effect that hydrolysis of N2O5 on sulfate aerosols has on tropospheric NOx and O3 budgets is studied. The results show that without this heterogeneous reaction, the model significantly overestimates NOx concentrations at high latitudes of the Northern Hemisphere (NH) in winter and spring in comparison to the observations during TOPSE; with this reaction, modeled NOx concentrations are close to the measured values. This comparison provides evidence that the hydrolysis of N2O5 on sulfate aerosol plays an important role in controlling the tropospheric NOx and O3 budgets. The calculated reduction of NOx attributed to this reaction is 80 to 90% in winter at high latitudes over North America. Because of the reduction of NOx, O3 concentrations are also decreased. The maximum O3 reduction occurs in spring although the maximum NOx reduction occurs in winter when photochemical O3 production is relatively low. The uncertainties related to uptake coefficient and aerosol loading in the model is analyzed. The analysis indicates that the changes in NOx due to these uncertainties are much smaller than the impact of hydrolysis of N2O5 on sulfate aerosol. The effect that hydrolysis of N2O5 on global NOx and O3 budgets are also assessed by the model. The results suggest that in the Northern Hemisphere, the average NOx budget decreases 50% due to this reaction in winter and 5% in summer. The average O3 budget is reduced by 8% in winter and 6% in summer. In the Southern Hemisphere (SH), the sulfate aerosol loading is significantly smaller than in the Northern Hemisphere. As a result, sulfate aerosol has little impact on NOx and O3 budgets of the Southern Hemisphere.

  11. Prevention of bacterial adhesion

    DEFF Research Database (Denmark)

    Klemm, Per; Vejborg, Rebecca Munk; Hancock, Viktoria

    2010-01-01

    Management of bacterial infections is becoming increasingly difficult due to the emergence and increasing prevalence of bacterial pathogens that are resistant to available antibiotics. Conventional antibiotics generally kill bacteria by interfering with vital cellular functions, an approach...... that imposes selection pressure for resistant bacteria. New approaches are urgently needed. Targeting bacterial virulence functions directly is an attractive alternative. An obvious target is bacterial adhesion. Bacterial adhesion to surfaces is the first step in colonization, invasion, and biofilm formation....... As such, adhesion represents the Achilles heel of crucial pathogenic functions. It follows that interference with adhesion can reduce bacterial virulence. Here, we illustrate this important topic with examples of techniques being developed that can inhibit bacterial adhesion. Some of these will become...

  12. Sulfated polysaccharides and cell differentiation in the sea urchin embryo.

    Science.gov (United States)

    Løvtrup-Rein, H; Løvtrup, S

    1984-01-01

    The synthesis of sulfated polysaccharides during the embryonic development of Paracentrotus lividus has been investigated by incorporation of radioactive sulfate, glucose, glucosamine and fucose. The following substances become labelled: fucan sulfate (approximately 60%), heparan sulfate (approximately 20%) and dermatan sulfate (approximately 20%), and possibly a very slight amount of chondroitin sulfate. In animalized and vegetalized embryos, the rate of incorporation is significantly reduced, and furthermore dermatan sulfate is almost absent in animalized embryos. It is concluded that this substance is associated with the differentiation of vegetative cells, possibly the mesenchyme cells.

  13. Kriging direct and indirect estimates of sulfate deposition: A comparison. Forest Service research paper

    Energy Technology Data Exchange (ETDEWEB)

    Reams, G.A.; Huso, M.M.P.; Vong, R.J.; McCollum, J.M.

    1997-08-01

    Due to logistical and cost constraints, acidic deposition is rarely measured at forest research or sampling locations. A crucial first step to assessing the effects of acid rain on forests is an accurate estimate of acidic deposition at forest sample sites. The authors examine two methods (direct and indirect) for estimating sulfate deposition at atmospherically unmonitored forest sites. The direct method only uses directly measured deposition data, while the indirect method additionally incorporates precipitation measurements from a spatially denser network of monitoring sites. Sulfate deposition values were estimated by point kriging using both the direct and indirect methods. By using the supplemental data from the precipitation monitoring network, estimates of sulfate deposition improved substantially, particularly at sites that are relatively isolated to the acid deposition monitoring network. Cross-validated procedures indicate that by using the indirect method, a reduction of approximately 20 to 25 percent in the predicted error sum of squares occurred.

  14. Anaerobic biodegradation of soybean biodiesel and diesel blends under sulfate-reducing conditions.

    Science.gov (United States)

    Wu, Shuyun; Yassine, Mohamad H; Suidan, Makram T; Venosa, Albert D

    2016-10-01

    Biotransformation of soybean biodiesel and its biodiesel/petrodiesel blends were investigated under sulfate-reducing conditions. Three blends of biodiesel, B100, B50, and B0, were treated using microbial cultures pre-acclimated to B100 (biodiesel only) and B80 (80% biodiesel and 20% petrodiesel). Results indicate that the biodiesel could be effectively biodegraded in the presence or absence of petrodiesel, whereas petrodiesel could not be biodegraded at all under sulfate-reducing conditions. The kinetics of biodegradation of individual Fatty Acid Methyl Ester (FAME) compounds and their accompanying sulfate-reduction rates were studied using a serum bottle test. As for the biodegradation of individual FAME compounds, the biodegradation rates for the saturated FAMEs decreased with increasing carbon chain length. For unsaturated FAMEs, biodegradation rates increased with increasing number of double bonds. The presence of petrodiesel had a greater effect on the rate of biodegradation of biodiesel than on the extent of removal.

  15. Comparative study on the mechanisms of rotavirus inactivation by sodium dodecyl sulfate and ethylenediaminetetraacetate

    Energy Technology Data Exchange (ETDEWEB)

    Ward, R.L. (Sandia Labs., Albuquerque, NM); Ashley, C.S.

    1980-06-01

    This report describes a comparative study on the effects of the anionic detergent sodium dodecyl sulfate and the chelating agent ethylenediaminetetraacetate on purified rotavirus SA-11 particles. Both chemicals readily inactivated rotavirus at quite low concentrations and under very mild conditions. In addition, both agents modified the viral capsid and prevented the adsorption of inactivated virions to cells. Capsid damage by ethylenediaminetetraacetate caused a shift in the densities of rotavirions from about l.35 to about 1.37 g/ml and a reduction in their sedimentation coefficients. Sodium dodcyl sulfate, on the other hand, did not detectably alter either of these physical properties of rotavirions. Both agents caused some alteration of the isoelectric points of the virions. Finally, analysis of rotavirus proteins showed that ethylenediaminetetraacetate caused the loss of two protein peaks from the electrophoretic pattern of virions but sodium dodecyl sulfate caused the loss of only one of these same protein peaks.

  16. Deciphering the Role of Tyrosine Sulfation in Xanthomonas oryzae pv. oryzae Using Shotgun Proteomic Analysis

    Directory of Open Access Journals (Sweden)

    Hye-Jee Park

    2016-06-01

    Full Text Available A bacterial tyrosine sulfotransferase, RaxST, is required for activation of rice XA21-mediated immunity, and it catalyzes sulfation of tyrosine residues of Omp1X and RaxX in Xanthomonas oryzae pv. oryzae, a causal agent of bacterial blight in rice. Although RaxST is biochemically well-characterized, biological functions of tyrosine sulfation have not been fully elucidated. We compared protein expression patterns between the wildtype and a raxST knockout mutant using shotgun proteomic analysis. Forty nine proteins displayed a more than 1.5-fold difference in their expression between the wildtype and the mutant strains. Clusters of orthologous groups analysis revealed that proteins involved in cell motility were most abundant, and phenotypic observation also showed that the twitching motility of the mutant was dramatically changed. These results indicate that tyrosine sulfation by RaxST is essential for Xoo movement, and they provide new insights into the biological roles of RaxST in cellular processes.

  17. Extension of anaerobic digestion model no. 1 with the processes of sulphate reduction

    NARCIS (Netherlands)

    Fedorovich, V.; Lens, P.N.L.; Kalyuzhnyi, S.

    2003-01-01

    In the present work, the Anaerobic Digestion Model No. 1 (ADM1) for computer simulation of anaerobic processes was extended to the processes of sulfate reduction. The upgrade maintained the structure of ADM1 and included additional blocks describing sulfate-reducing processes (multiple reaction stoi

  18. High sulfur isotope fractionation associated with anaerobic oxidation of methane in a low sulfate, iron rich environment

    Science.gov (United States)

    Weber, Hannah; Thamdrup, Bo; Habicht, Kirsten

    2016-06-01

    Sulfur isotope signatures provide key information for the study of microbial activity in modern systems and the evolution of the Earth surface redox system. Microbial sulfate reducers shift sulfur isotope distributions by discriminating against heavier isotopes. This discrimination is strain-specific and often suppressed at sulfate concentrations in the lower micromolar range that are typical to freshwater systems and inferred for ancient oceans. Anaerobic oxidation of methane (AOM) is a sulfate-reducing microbial process with a strong impact on global sulfur cycling in modern habitats and potentially in the geological past, but its impact on sulfur isotope signatures is poorly understood, especially in low sulfate environments. We investigated sulfur cycling and 34S fractionation in a low-sulfate freshwater sediment with biogeochemical conditions analogous to Early Earth environments. The zone of highest AOM activity was associated in situ with a zone of strong 34S depletions in the pool of reduced sulfur species, indicating a coupling of sulfate reduction and AOM at sulfate concentrations oceanic levels. Therefore, we suggest that sulfur isotope fractionation during AOM must be considered when interpreting 34S signatures in modern and ancient environment.

  19. Impact of elevated nitrate on sulfate-reducing bacteria: A comparative study of Desulfovibrio vulgaris

    Energy Technology Data Exchange (ETDEWEB)

    He, Q.; He, Z.; Joyner, D.C.; Joachimiak, M.; Price, M.N.; Yang, Z.K.; Yen, H.-C. B.; Hemme, C. L.; Chen, W.; Fields, M.; Stahl, D. A.; Keasling, J. D.; Keller, M.; Arkin, A. P.; Hazen, T. C.; Wall, J. D.; Zhou, J.

    2010-07-15

    Sulfate-reducing bacteria have been extensively studied for their potential in heavy-metal bioremediation. However, the occurrence of elevated nitrate in contaminated environments has been shown to inhibit sulfate reduction activity. Although the inhibition has been suggested to result from the competition with nitrate-reducing bacteria, the possibility of direct inhibition of sulfate reducers by elevated nitrate needs to be explored. Using Desulfovibrio vulgaris as a model sulfate-reducing bacterium, functional genomics analysis reveals that osmotic stress contributed to growth inhibition by nitrate as shown by the upregulation of the glycine/betaine transporter genes and the relief of nitrate inhibition by osmoprotectants. The observation that significant growth inhibition was effected by 70 mM NaNO{sub 3} but not by 70 mM NaCl suggests the presence of inhibitory mechanisms in addition to osmotic stress. The differential expression of genes characteristic of nitrite stress responses, such as the hybrid cluster protein gene, under nitrate stress condition further indicates that nitrate stress response by D. vulgaris was linked to components of both osmotic and nitrite stress responses. The involvement of the oxidative stress response pathway, however, might be the result of a more general stress response. Given the low similarities between the response profiles to nitrate and other stresses, less-defined stress response pathways could also be important in nitrate stress, which might involve the shift in energy metabolism. The involvement of nitrite stress response upon exposure to nitrate may provide detoxification mechanisms for nitrite, which is inhibitory to sulfate-reducing bacteria, produced by microbial nitrate reduction as a metabolic intermediate and may enhance the survival of sulfate-reducing bacteria in environments with elevated nitrate level.

  20. A Direct Sulfation Process of a Marine Polysaccharide in Ionic Liquid

    Directory of Open Access Journals (Sweden)

    Nathalie Chopin

    2015-01-01

    Full Text Available GY785 is an exopolysaccharide produced by a mesophilic bacterial strain Alteromonas infernus discovered in the deep-sea hydrothermal vents. GY785 highly sulfated derivative (GY785 DRS was previously demonstrated to be a promising molecule driving the efficient mesenchymal stem cell chondrogenesis for cartilage repair. This glycosaminoglycan- (GAG- like compound was modified in a classical solvent (N,N′-dimethylformamide. However, the use of classical solvents limits the polysaccharide solubility and causes the backbone degradation. In the present study, a one-step efficient sulfation process devoid of side effects (e.g., polysaccharide depolymerization and/or degradation was developed to produce GAG-like derivatives. The sulfation of GY785 derivative (GY785 DR was carried out using ionic liquid as a reaction medium. The successful sulfation of this anionic and highly branched heteropolysaccharide performed in ionic liquid would facilitate the production of new molecules of high specificity for biological targets such as tissue engineering or regenerative medicine.

  1. Sulfated polysaccharides from Loligo vulgaris skin: potential biological activities and partial purification.

    Science.gov (United States)

    Abdelmalek, Baha Eddine; Sila, Assaâd; Krichen, Fatma; Karoud, Wafa; Martinez-Alvarez, Oscar; Ellouz-Chaabouni, Semia; Ayadi, Mohamed Ali; Bougatef, Ali

    2015-01-01

    The characteristics, biological properties, and purification of sulfated polysaccharides extracted from squid (Loligo vulgaris) skin were investigated. Their chemical and physical characteristics were determined using X-ray diffraction and infrared spectroscopic analysis. Sulfated polysaccharides from squid skin (SPSS) contained 85.06% sugar, 2.54% protein, 1.87% ash, 8.07% sulfate, and 1.72% uronic acid. The antioxidant properties of SPSS were investigated based on DPPH radical-scavenging capacity (IC50 = 19.42 mg mL(-1)), hydrogen peroxide-scavenging activity (IC50 = 0.91 mg mL(-1)), and β-carotene bleaching inhibition (IC50 = 2.79 mg mL(-1)) assays. ACE-inhibitory activity of SPSS was also investigated (IC50 = 0.14 mg mL(-1)). Further antimicrobial activity assays indicated that SPSS exhibited marked inhibitory activity against the bacterial and fungal strains tested. Those polysaccharides did not display hemolytic activity towards bovine erythrocytes. Fractionation by DEAE-cellulose column chromatography showed three major absorbance peaks. Results of this study suggest that sulfated polysaccharides from squid skin are attractive sources of polysaccharides and promising candidates for future application as dietary ingredients.

  2. Synthesis of the Oligosaccharides Related to Branching Sites of Fucosylated Chondroitin Sulfates from Sea Cucumbers

    Directory of Open Access Journals (Sweden)

    Nadezhda E. Ustyuzhanina

    2015-02-01

    Full Text Available Natural anionic polysaccharides fucosylated chondroitin sulfates (FCS from sea cucumbers attract great attention nowadays due to their ability to influence various biological processes, such as blood coagulation, thrombosis, angiogenesis, inflammation, bacterial and viral adhesion. To determine pharmacophore fragments in FCS we have started systematic synthesis of oligosaccharides with well-defined structure related to various fragments of these polysaccharides. In this communication, the synthesis of non-sulfated and selectively O-sulfated di- and trisaccharides structurally related to branching sites of FCS is described. The target compounds are built up of propyl β-d-glucuronic acid residue bearing at O-3 α-l-fucosyl or α-l-fucosyl-(1→3-α-l-fucosyl substituents. O-Sulfation pattern in the fucose units of the synthetic targets was selected according to the known to date holothurian FCS structures. Stereospecific α-glycoside bond formation was achieved using 2-O-benzyl-3,4-di-O-chloroacetyl-α-l-fucosyl trichloroacetimidate as a donor. Stereochemical outcome of the glycosylation was explained by the remote participation of the chloroacetyl groups with the formation of the stabilized glycosyl cations, which could be attacked by the glycosyl acceptor only from the α-side. The experimental results were in good agreement with the SCF/MP2 calculated energies of such participation. The synthesized oligosaccharides are regarded as model compounds for the determination of a structure-activity relationship in FCS.

  3. Sulfated polysaccharides and immune response: promoter or inhibitor?

    Science.gov (United States)

    Chen, D; Wu, X Z; Wen, Z Y

    2008-06-01

    Sulfated polysaccharides, which frequently connect to core protein, are expressed not only on cell surface but also throughout the extracellular matrix. Besides providing structural integrity of cells, sulfated polysaccharides interact with a variety of sulfated polysaccharides-binding proteins, such as growth factors, cytokines, chemokines and proteases. Sulfated polysaccharides play two-edged roles, inhibitor and promoter, in immune response. Some sulfated polysaccharides act as the immunosuppressor by blocking inflammatory signal transduction induced by proinflammatory cytokines, suppressing the activation of complement and inhibiting the process that leukocytes adhere to and pass through endothelium. On the contrary, the interaction between immune cells and sulfated polysaccharides produced by bacteria, endothelial cells and immune cells initiate the occurrence of immune response. It promotes the processes of recognizing and arresting antigen, migrating transendothelium, moving into and out of immune organ and enhancing the proliferation of lymphocyte. The structure of sulfated polysaccharides, such as molecular weight and sulfated sites heterogeneity, especially the degree of disaccharide sulfation, position of the sulfate moiety and organization of sulfated domains, may play critical role in their controversial effects. As a consequence, the interaction between sulfated polysaccharides and sulfated polysaccharide-binding proteins may be changed by modifying the structure of sulfated polysaccharides chains. The administration of drug targeting sulfated polysaccharide-protein interaction may be useful in treating inflammatory related diseases.

  4. Geochemistry of dissolved inorganic carbon in a Coastal Plain aquifer. 1. Sulfate from confining beds as an oxidant in microbial CO2 production

    Science.gov (United States)

    Chapelle, F.H.; McMahon, P.B.

    1991-01-01

    A primary source of dissolved inorganic carbon (DIC) in the Black Creek aquifer of South Carolina is carbon dioxide produced by microbially mediated oxidation of sedimentary organic matter. Groundwater chemistry data indicate, however, that the available mass of inorganic electron acceptors (oxygen, Fe(III), and sulfate) and observed methane production is inadequate to account for observed CO2 production. Although sulfate concentrations are low (approximately 0.05-0.10 mM) in aquifer water throughout the flow system, sulfate concentrations are greater in confining-bed pore water (0.4-20 mM). The distribution of culturable sulfate-reducing bacteria in these sediments suggests that this concentration gradient is maintained by greater sulfate-reducing activity in sands than in clays. Calculations based on Fick's Law indicate that possible rates of sulfate diffusion to aquifer sediments are sufficient to explain observed rates of CO2 production (about 10-5 mmoll-1 year-1), thus eliminating the apparent electron-acceptor deficit. Furthermore, concentrations of dissolved hydrogen in aquifer water are in the range characteristic of sulfate reduction (2-6 nM), which provides independent evidence that sulfate reduction is the predominant terminal electron-accepting process in this system. The observed accumulation of pyrite- and calcite-cemented sandstones at sand-clay interfaces is direct physical evidence that these processes have been continuing over the history of these sediments. ?? 1991.

  5. What is the current status of chondroitin sulfate and glucosamine for the treatment of knee osteoarthritis?

    Science.gov (United States)

    Henrotin, Yves; Marty, Marc; Mobasheri, Ali

    2014-07-01

    Chondroitin sulfate and glucosamine sulfate exert beneficial effects on the metabolism of in vitro models of cells derived from synovial joints: chondrocytes, synoviocytes and cells from subchondral bone, all of which are involved in osteoarthritis (OA). They increase type II collagen and proteoglycan synthesis in human articular chondrocytes and are able to reduce the production of some pro-inflammatory mediators and proteases, to reduce the cellular death process, and improve the anabolic/catabolic balance of the extracellular cartilage matrix (ECM). Clinical trials have reported a beneficial effect of chondroitin sulfate and glucosamine sulfate on pain and function. The structure-modifying effects of these compounds have been reported and analyzed in recent meta-analyses. The results for knee OA demonstrate a small but significant reduction in the rate of joint space narrowing. Chondroitin sulfate and glucosamine sulphate are recommended by several guidelines from international societies for the management of knee and hip OA, while others do not recommend these products or recommend only under condition. This comprehensive review clarifies the role of these compounds in the therapeutic arsenal for patients with knee OA.

  6. Evaluation of the treatment of chromite ore processing residue by ferrous sulfate and asphalt.

    Science.gov (United States)

    Moon, Deok Hyun; Wazne, Mahmoud; Koutsospyros, Agamemnon; Christodoulatos, Christos; Gevgilili, Halil; Malik, Moinuddin; Kalyon, Dilhan M

    2009-07-15

    The effectiveness of the treatment of chromite ore processing residue (COPR) with ferrous sulfate and encapsulation into asphalt were explored separately and in combination. The asphalt treatment was conducted by mixing COPR or ferrous sulfate pretreated COPR with varying amounts of asphalt. To assess the efficacy of the treatment, the leachability of toxicity characteristic leaching procedure (TCLP) total chromium (Cr) from all treated samples was determined for curing periods up to 16 months. X-ray absorption near edge structure (XANES) analyses were also performed to evaluate the Cr(6+) concentration in the selected samples. The combination treatment of ferrous sulfate and the encapsulation of the treated COPR into asphalt reduced the TCLP total Cr concentration to lower than the regulatory limit of 5mg/L for Cr contaminated soils, after 16 months. However, the Cr concentrations were still higher than the universal treatment standards (UTS) of 0.6 mg/L for hazardous waste. On the other hand, treatment with ferrous sulfate alone or the encapsulation of the COPR in asphalt failed to meet the TCLP total Cr concentration of 5mg/L, after 16 months. XANES analyses results showed that more than 75% Cr(6+) reduction was achieved upon pretreatment with ferrous sulfate.

  7. On the roles and regulation of chondroitin sulfate and heparan sulfate in zebrafish pharyngeal cartilage morphogenesis

    DEFF Research Database (Denmark)

    Holmborn, Katarina; Habicher, Judith; Kasza, Zsolt;

    2012-01-01

    The present study addresses the roles of heparan sulfate (HS) proteoglycans and chondroitin sulfate (CS) proteoglycans in the development of zebrafish pharyngeal cartilage structures. uxs1 and b3gat3 mutants, predicted to have impaired biosynthesis of both HS and CS because of defective formation...

  8. Bacterial contamination of platelet concentrates: pathogen detection and inactivation methods

    Directory of Open Access Journals (Sweden)

    Dana Védy

    2009-04-01

    Full Text Available Whereas the reduction of transfusion related viral transmission has been a priority during the last decade, bacterial infection transmitted by transfusion still remains associated to a high morbidity and mortality, and constitutes the most frequent infectious risk of transfusion. This problem especially concerns platelet concentrates because of their favorable bacterial growth conditions. This review gives an overview of platelet transfusion-related bacterial contamination as well as on the different strategies to reduce this problem by using either bacterial detection or inactivation methods.

  9. Heparin-like properties of sulfated alginates with defined sequences and sulfation degrees.

    Science.gov (United States)

    Arlov, Øystein; Aachmann, Finn Lillelund; Sundan, Anders; Espevik, Terje; Skjåk-Bræk, Gudmund

    2014-07-14

    Sulfated glycosaminoglycans have a vast range of protein interactions relevant to the development of new biomaterials and pharmaceuticals, but their characterization and application is complicated mainly due to a high structural variability and the relative difficulty to isolate large quantities of structurally homogeneous samples. Functional and versatile analogues of heparin/heparan sulfate can potentially be created from sulfated alginates, which offer structure customizability through targeted enzymatic epimerization and precise tuning of the sulfation degree. Alginates are linear polysaccharides consisting of β-D-mannuronic acid (M) and α-L-guluronic acid (G), derived from brown algae and certain bacteria. The M/G ratio and distribution of blocks are critical parameters for the physical properties of alginates and can be modified in vitro using mannuronic-C5-epimerases to introduce sequence patterns not found in nature. Alginates with homogeneous sequences (poly-M, poly-MG, and poly-G) and similar molecular weights were chemically sulfated and structurally characterized by the use of NMR and elemental analysis. These sulfated alginates were shown to bind and displace HGF from the surface of myeloma cells in a manner similar to heparin. We observed dependence on the sulfation degree (DS) as well as variation in efficacy based on the alginate monosaccharide sequence, relating to relative flexibility and charge density in the polysaccharide chains. Co-incubation with human plasma showed complement compatibility of the alginates and lowering of soluble terminal complement complex levels by sulfated alginates. The sulfated polyalternating (poly-MG) alginate proved to be the most reproducible in terms of precise sulfation degrees and showed the greatest relative degree of complement inhibition and HGF interaction, maintaining high activity at low DS values.

  10. Prospect on Microbial Production of Chondroitin Sulfate%硫酸软骨素微生物生产展望

    Institute of Scientific and Technical Information of China (English)

    陈祥娥; 凌沛学

    2012-01-01

    Chondroitin sulfate is a member of the glycosaminoglycan family, with a wide range of applications. The bacterial capsular polysaccharide having similar structure to the biosynthetic precursor of chondroitin sulfate can be used as the substrate to produce chondroitin sulfate and its analogs by chemical or biosynthesis modification, which is a promising way of non-animals CS production. This review briefly introduces the relevant studies.%硫酸软骨素(CS)为糖胺聚糖家族一员,具有广泛的应用.采用与CS生物合成前体具有相似结构的细菌荚膜多糖为底物,经化学或生物修饰可生产CS及其类似物,是一种较有希望的非动物源性CS生产方式.本文对相关研究作一综述.

  11. Sulfate-reducing microorganisms in wetlands – fameless actors in carbon cycling and climate change

    Directory of Open Access Journals (Sweden)

    Michael ePester

    2012-02-01

    Full Text Available Freshwater wetlands are a major source of the greenhouse gas methane but at the same time can function as carbon sink. Their response to global warming and environmental pollution is one of the largest unknowns in the upcoming decades to centuries. In this review, we highlight the role of sulfate-reducing microorganisms (SRM in the intertwined element cycles of wetlands. Although regarded primarily as methanogenic environments, biogeochemical studies have revealed a previously hidden sulfur cycle in wetlands that can sustain rapid renewal of the small standing pools of sulfate. Thus, dissimilatory sulfate reduction, which frequently occurs at rates comparable to marine surface sediments, can contribute up to 36–50% to anaerobic carbon mineralization in these ecosystems. Since sulfate reduction is thermodynamically favored relative to fermentative processes and methanogenesis, it effectively decreases gross methane production thereby mitigating the flux of methane to the atmosphere. However, very little is known about wetland SRM. Molecular analyses using dsrAB [encoding subunit A and B of the dissimilatory (bisulfite reductase] as marker genes demonstrated that members of novel phylogenetic lineages, which are unrelated to recognized SRM, dominate dsrAB richness and, if tested, are also abundant among the dsrAB-containing wetland microbiota. These discoveries point towards the existence of so far unknown SRM that are an important part of the autochthonous wetland microbiota. In addition to these numerically dominant microorganisms, a recent stable isotope probing study of SRM in a German peatland indicated that rare biosphere members might be highly active in situ and have a considerable stake in wetland sulfate reduction. The hidden sulfur cycle in wetlands and the fact that wetland SRM are not well represented by described SRM species explains their so far neglected role as important actors in carbon cycling and climate change.

  12. Microkinetic Modeling of Lean NOx Trap Sulfation and Desulfation

    Energy Technology Data Exchange (ETDEWEB)

    Larson, Richard S. [Sandia National Lab. (SNL-CA), Livermore, CA (United States)

    2011-08-01

    A microkinetic reaction sub-mechanism designed to account for the sulfation and desulfation of a commercial lean NOx trap (LNT) is presented. This set of reactions is appended to a previously developed mechanism for the normal storage and regeneration processes in an LNT in order to provide a comprehensive modeling tool. The reactions describing the storage, release, and reduction of sulfur oxides are patterned after those involving NOx, but the number of reactions is kept to the minimum necessary to give an adequate simulation of the experimental observations. Values for the kinetic constants are estimated by fitting semi-quantitatively the somewhat limited experimental data, using a transient plug flow reactor code to model the processes occurring in a single monolith channel. Rigorous thermodynamic constraints are imposed in order to ensure that the overall mechanism is consistent both internally and with the known properties of all gas-phase species. The final mechanism is shown to be capable of reproducing the principal aspects of sulfation/desulfation behavior, most notably (a) the essentially complete trapping of SO2 during normal cycling; (b) the preferential sulfation of NOx storage sites over oxygen storage sites and the consequent plug-like and diffuse sulfation profiles; (c) the degradation of NOx storage and reduction (NSR) capability with increasing sulfation level; and (d) the mix of H2S and SO2 evolved during desulfation by temperature-programmed reduction.

  13. Peritonitis - spontaneous bacterial

    Science.gov (United States)

    Spontaneous bacterial peritonitis (SBP); Ascites - peritonitis; Cirrhosis - peritonitis ... who are on peritoneal dialysis for kidney failure. Peritonitis may have other causes . These include infection from ...

  14. New insights into the transport processes controlling the sulfate-methane-transition-zone near methane vents

    Science.gov (United States)

    Sultan, Nabil; Garziglia, Sébastien; Ruffine, Livio

    2016-05-01

    Over the past years, several studies have raised concerns about the possible interactions between methane hydrate decomposition and external change. To carry out such an investigation, it is essential to characterize the baseline dynamics of gas hydrate systems related to natural geological and sedimentary processes. This is usually treated through the analysis of sulfate-reduction coupled to anaerobic oxidation of methane (AOM). Here, we model sulfate reduction coupled with AOM as a two-dimensional (2D) problem including, advective and diffusive transport. This is applied to a case study from a deep-water site off Nigeria’s coast where lateral methane advection through turbidite layers was suspected. We show by analyzing the acquired data in combination with computational modeling that a two-dimensional approach is able to accurately describe the recent past dynamics of such a complex natural system. Our results show that the sulfate-methane-transition-zone (SMTZ) is not a vertical barrier for dissolved sulfate and methane. We also show that such a modeling is able to assess short timescale variations in the order of decades to centuries.

  15. Pathway of Fermentative Hydrogen Production by Sulfate-reducing Bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Wall, Judy D. [Univ. of Missouri, Columbia, MO (United States)

    2015-02-16

    Biofuels are a promising source of sustainable energy. Such biofuels are intermediate products of microbial metabolism of renewable substrates, in particular, plant biomass. Not only are alcohols and solvents produced in this degradative process but energy-rich hydrogen as well. Non photosynthetic microbial hydrogen generation from compounds other than sugars has not been fully explored. We propose to examine the capacity of the abundant soil anaerobes, sulfate-reducing bacteria, for hydrogen generation from organic acids. These apparently simple pathways have yet to be clearly established. Information obtained may facilitate the exploitation of other microbes not yet readily examined by molecular tools. Identification of the flexibility of the metabolic processes to channel reductant to hydrogen will be useful in consideration of practical applications. Because the tools for genetic and molecular manipulation of sulfate-reducing bacteria of the genus Desulfovibrio are developed, our efforts will focus on two strains, D. vulgaris Hildenborough and Desulfovibrio G20.Therefore total metabolism, flux through the pathways, and regulation are likely to be limiting factors which we can elucidate in the following experiments.

  16. Activity and phylogenetic diversity of sulfate-reducing microorganisms in low-temperature subsurface fluids within the upper oceanic crust

    Directory of Open Access Journals (Sweden)

    Alberto eRobador

    2015-01-01

    Full Text Available The basaltic ocean crust is the largest aquifer system on Earth, yet the rates of biological activity in this environment are unknown. Low-temperature (<100 °C fluid samples were investigated from two borehole observatories in the Juan de Fuca Ridge flank, representing a range of upper oceanic basement thermal and geochemical properties. Microbial sulfate reduction rates were measured in laboratory incubations with 35S-sulfate over a range of temperatures, with microbial activity limited by the availability of organic electron donors. Thermodynamic calculations indicate energetic constraints for metabolism in the higher temperature, more altered and isolated fluids, which together with relatively higher cell-specific sulfate reduction rates reveal increased maintenance requirements, consistent with novel species-level dsrAB phylotypes of thermophilic sulfate-reducing microorganisms. Our estimates suggest that microbially-mediated sulfate reduction may account for the removal of organic matter in fluids within the upper oceanic crust and underscore the potential quantitative impact of microbial processes in deep subsurface marine crustal fluids on marine and global biogeochemical carbon cycling.

  17. Methane and sulfate dynamics in sediments from mangrove-dominated tropical coastal lagoons, Yucatán, Mexico

    Science.gov (United States)

    Chuang, Pei-Chuan; Young, Megan B.; Dale, Andrew W.; Miller, Laurence G.; Herrera-Silveira, Jorge A.; Paytan, Adina

    2016-05-01

    Porewater profiles in sediment cores from mangrove-dominated coastal lagoons (Celestún and Chelem) on the Yucatán Peninsula, Mexico, reveal the widespread coexistence of dissolved methane and sulfate. This observation is interesting since dissolved methane in porewaters is typically oxidized anaerobically by sulfate. To explain the observations we used a numerical transport-reaction model that was constrained by the field observations. The model suggests that methane in the upper sediments is produced in the sulfate reduction zone at rates ranging between 0.012 and 31 mmol m-2 d-1, concurrent with sulfate reduction rates between 1.1 and 24 mmol SO42- m-2 d-1. These processes are supported by high organic matter content in the sediment and the use of non-competitive substrates by methanogenic microorganisms. Indeed sediment slurry incubation experiments show that non-competitive substrates such as trimethylamine (TMA) and methanol can be utilized for microbial methanogenesis at the study sites. The model also indicates that a significant fraction of methane is transported to the sulfate reduction zone from deeper zones within the sedimentary column by rising bubbles and gas dissolution. The shallow depths of methane production and the fast rising methane gas bubbles reduce the likelihood for oxidation, thereby allowing a large fraction of the methane formed in the sediments to escape to the overlying water column.

  18. Photoinactivation of major bacterial pathogens in aquaculture

    Directory of Open Access Journals (Sweden)

    Heyong Jin Roh

    2016-08-01

    Full Text Available Abstract Background Significant increases in the bacterial resistance to various antibiotics have been found in fish farms. Non-antibiotic therapies for infectious diseases in aquaculture are needed. In recent years, light-emitting diode technology has been applied to the inactivation of pathogens, especially those affecting humans. The purpose of this study was to assess the effect of blue light (wavelengths 405 and 465 nm on seven major bacterial pathogens that affect fish and shellfish important in aquaculture. Results We successfully demonstrate inactivation activity of a 405/465-nm LED on selected bacterial pathogens. Although some bacteria were not fully inactivated by the 465-nm light, the 405-nm light had a bactericidal effect against all seven pathogens, indicating that blue light can be effective without the addition of a photosensitizer. Photobacterium damselae, Vibrio anguillarum, and Edwardsiella tarda were the most susceptible to the 405-nm light (36.1, 41.2, and 68.4 J cm−2, respectively, produced one log reduction in the bacterial populations, whereas Streptococcus parauberis was the least susceptible (153.8 J cm−2 per one log reduction. In general, optical density (OD values indicated that higher bacterial densities were associated with lower inactivating efficacy, with the exception of P. damselae and Vibrio harveyi. In conclusion, growth of the bacterial fish and shellfish pathogens evaluated in this study was inactivated by exposure to either the 405- or 465-nm light. In addition, inactivation was dependent on exposure time. Conclusions This study presents that blue LED has potentially alternative therapy for treating fish and shellfish bacterial pathogens. It has great advantages in aspect of eco-friendly treating methods differed from antimicrobial methods.

  19. Tracking photosynthetic sulfide oxidation in a meromictic lake using sulfate δ34S and δ18O

    Science.gov (United States)

    Gilhooly, W. P.; Reinhard, C.; Lyons, T. W.; Glass, J. B.

    2012-12-01

    Phototrophic sulfur bacteria oxidize sulfide and fix carbon dioxide in the presence of sunlight without producing oxygen. Environmental conditions in the Paleo- and Mesoproterozoic, when atmospheric oxygen concentrations were at low levels and portions of the oceans were anoxic and sulfidic (euxinic), were conducive to widespread carbon fixation by anoxygenic photosynthesis. This pathway may have helped sustain euxinic conditions in the Proterozoic water column. With limited organic biomarker and geochemical evidence for widespread production of anoxygenic phototrophs, however, additional proxies are needed to fingerprint paleoecological and biogeochemical signals associated with photic zone euxinia. Paired δ34S and δ18O from ancient sulfates (gypsum, barite, or CAS) may offer an added constraint on the history and ecological dominance of photosynthetic S-oxidation. Sulfate-oxygen can fractionate during sulfate reduction, but the extent of isotopic enrichment is controlled either by kinetic isotope effects imparted during intracellular enzymatic steps or equilibrium oxygen exchange with ambient water. An improved understanding of these processes can be gained from modern natural environments. Mahoney Lake is a density-stratified lake located within the White Lake Basin of British Columbia. The euxinic water column supports a dense plate of purple sulfur bacteria (Amoebobacter purpureus) that thrives where free sulfide intercepts the photic zone at ~7 m water depth. We analyzed the isotopic composition of sulfate (δ34SSO4 and δ18OSO4), sulfide (δ34SH2S), and water (δ18OH2O) to track the potentially coupled processes of dissimilatory sulfate reduction and phototrophic sulfide oxidation within this meromictic lake. Large isotopic offsets observed between sulfate and sulfide within the monimolimnion (δ34SSO4-H2S = 51‰) and within pore waters along the oxic margin (δ34SSO4-H2S >50‰) are consistent with sulfate reduction in both the sediments and the anoxic

  20. Microbial Fe(III) Oxide Reduction in Chocolate Pots Hot Springs, Yellowstone National Park

    Science.gov (United States)

    Fortney, N. W.; Roden, E. E.; Boyd, E. S.; Converse, B. J.

    2014-12-01

    Previous work on dissimilatory iron reduction (DIR) in Yellowstone National Park (YNP) has focused on high temperature, low pH environments where soluble Fe(III) is utilized as an electron acceptor for respiration. Much less attention has been paid to DIR in lower temperature, circumneutral pH environments, where solid phase Fe(III) oxides are the dominant forms of Fe(III). This study explored the potential for DIR in the warm (ca. 40-50°C), circumneutral pH Chocolate Pots hot springs (CP) in YNP. Most probable number (MPN) enumerations and enrichment culture studies confirmed the presence of endogenous microbial communities that reduced native CP Fe(III) oxides. Enrichment cultures demonstrated sustained DIR coupled to acetate and lactate oxidation through repeated transfers over ca. 450 days. Pyrosequencing of 16S rRNA genes indicated that the dominant organisms in the enrichments were closely affiliated with the well known Fe(III) reducer Geobacter metallireducens. Additional taxa included relatives of sulfate reducing bacterial genera Desulfohalobium and Thermodesulfovibrio; however, amendment of enrichments with molybdate, an inhibitor of sulfate reduction, suggested that sulfate reduction was not a primary metabolic pathway involved in DIR in the cultures. A metagenomic analysis of enrichment cultures is underway in anticipation of identifying genes involved in DIR in the less well-characterized dominant organisms. Current studies are aimed at interrogating the in situ microbial community at CP. Core samples were collected along the flow path (Fig. 1) and subdivided into 1 cm depth intervals for geochemical and microbiological analysis. The presence of significant quantities of Fe(II) in the solids indicated that DIR is active in situ. A parallel study investigated in vitro microbial DIR in sediments collected from three of the coring sites. DNA was extracted from samples from both studies for 16S rRNA gene and metagenomic sequencing in order to obtain a

  1. Virulence reduction in Bacteriophage resistant bacteria

    Directory of Open Access Journals (Sweden)

    Marcela eLeón

    2015-04-01

    Full Text Available Bacteriophages can influence the abundance, diversity and evolution of bacterial communities. Several bacteriophages have been reported to add virulence factors to their host and to increase bacterial virulence. However, lytic bacteriophages can also exert a selective pressure allowing the proliferation of strains with reduced virulence. This reduction can be explained because bacteriophages use structures present on the bacterial surface as receptors, which can be virulence factors in different bacterial species. Therefore, strains with modifications in these receptors will be resistant to bacteriophage infection and may also exhibit reduced virulence. This mini-review summarizes the reports on bacteriophage-resistant strains with reductions in virulence, and it discusses the potential consequences in phage therapy and in the use of bacteriophages to select attenuated strains for vaccines.

  2. Salt Reduction in a Model High-Salt Akawi Cheese: Effects on Bacterial Activity, pH, Moisture, Potential Bioactive Peptides, Amino Acids, and Growth of Human Colon Cells.

    Science.gov (United States)

    Gandhi, Akanksha; Shah, Nagendra P

    2016-04-01

    This study evaluated the effects of sodium chloride reduction and its substitution with potassium chloride on Akawi cheese during storage for 30 d at 4 °C. Survival of probiotic bacteria (Lactobacillus acidophilus, Lactobacillus casei, and Bifidobacterium longum) and starter bacteria (Streptococcus thermophilus and Lactobacillus delbrueckii ssp. bulgaricus), angiotensin-converting enzyme-inhibitory and antioxidant activities, and concentrations of standard amino acids as affected by storage in different brine solutions (10% NaCl, 7.5% NaCl, 7.5% NaCl+KCl [1:1], 5% NaCl, and 5% NaCl+KCl [1:1]) were investigated. Furthermore, viability of human colon cells and human colon cancer cells as affected by the extract showing improved peptide profiles, highest release of amino acids and antioxidant activity (that is, from cheese brined in 7.5% NaCl+KCl) was evaluated. Significant increase was observed in survival of probiotic bacteria in cheeses with low salt after 30 d. Calcium content decreased slightly during storage in all cheeses brined in various solutions. Further, no significant changes were observed in ACE-inhibitory activity and antioxidant activity of cheeses during storage. Interestingly, concentrations of 4 essential amino acids (phenylalanine, tryptophan, valine, and leucine) increased significantly during storage in brine solutions containing 7.5% total salt. Low concentration of cheese extract (100 μg/mL) significantly improved the growth of normal human colon cells, and reduced the growth of human colon cancer cells. Overall, the study revealed that cheese extracts from reduced-NaCl brine improved the growth of human colon cells, and the release of essential amino acids, but did not affect the activities of potential bioactive peptides.

  3. Source apportionment of sulfate and nitrate particulate matter in the Eastern United States and effectiveness of emission control programs.

    Science.gov (United States)

    Zhang, Hongliang; Hu, Jianlin; Kleeman, Michael; Ying, Qi

    2014-08-15

    Reducing population exposure to PM2.5 in the eastern US will require control of secondary sulfate and nitrate. A source-oriented Community Multi-scale Air Quality (CMAQ) model is used to determine contributions of major emission sources to nitrate and sulfate concentrations in the seven eastern US cities (New York City, Pittsburgh, Baltimore, Chicago, Detroit, St. Paul, and Winston-Salem) in January and August of 2000 and 2006. Identified major nitrate sources include on-road gasoline-powered vehicles, diesel engines, natural gas and coal combustion. From 2000 to 2006, January nitrate concentrations decreased by 25-68% for all the seven cities. On average, ~53% of this change was caused by emissions controls while 47% was caused by meteorology variations. August nitrate concentrations decreased by a maximum of 68% in New York City but Detroit experienced increasing August nitrate concentrations by up to 33%. On average, ~33% of the reduction in nitrate is offset by increases associated with meteorological conditions that favor nitrate formation. Coal combustion and natural gas are the dominant sources for sulfate in both seasons. January sulfate decrease from 2000 to 2006 in all cities by 4-58% except New York City, which increases by 13%. On average, ~93% of the reduction in sulfate was attributed to emission controls with 7% associated with changes in meteorology. August sulfate concentrations decrease by 11-44% in all cities. On average, emission controls alone between 2000 and 2006 would have caused 6% more reduction but the effectiveness of the controls was mitigated by meteorology conditions more favorable to sulfate production in 2006 vs. 2000. The results of this study suggest that regional emissions controls between 2000 and 2006 have been effective at reducing population exposure to PM2.5 in the eastern US, but yearly variations in meteorology must be carefully considered when assessing the exact magnitude of the control benefits.

  4. Formation of the natural sulfate aerosol

    Energy Technology Data Exchange (ETDEWEB)

    Kerminen, V.M.; Hillamo, R.; Maekinen, M.; Virkkula, A.; Maekelae, T.; Pakkanen, T. [Helsinki Univ. (Finland). Dept. of Physics

    1996-12-31

    Anthropogenic sulfate aerosol, together with particles from biomass burning, may significantly reduce the climatic warming due to man-made greenhouse gases. The radiative forcing of aerosol particles is based on their ability to scatter and absorb solar radiation (direct effect), and on their influences on cloud albedos and lifetimes (indirect effect). The direct aerosol effect depends strongly on the size, number and chemical composition of particles, being greatest for particles of 0.1-1 {mu}m in diameter. The indirect aerosol effect is dictated by the number of particles being able to act as cloud condensation nuclei (CCN). For sulfate particles, the minimum CCN size in tropospheric clouds is of the order of 0.05-0.2 {mu}m. To improve aerosol parameterizations in future climate models, it is required that (1) both primary and secondary sources of various particle types will be characterized at a greater accuracy, and (2) the influences of various atmospheric processes on the spatial and temporal distribution of these particles and their physico-chemical properties are known much better than at the present. In estimating the climatic forcing due to the sulfate particles, one of the major problems is to distinguish between sulfur from anthropogenic sources and that of natural origin. Global emissions of biogenic and anthropogenic sulfate pre-cursors are comparable in magnitude, but over regional scales either of these two source types may dominate. The current presentation is devoted to discussing the natural sulfate aerosol, including the formation of sulfur-derived particles in the marine environment, and the use of particulate methanesulfonic acid (MSA) as a tracer for the natural sulfate

  5. Anti HSV-1 Activity of Halistanol Sulfate and Halistanol Sulfate C Isolated from Brazilian Marine Sponge Petromica citrina (Demospongiae

    Directory of Open Access Journals (Sweden)

    Cláudia Maria Oliveira Simões

    2013-10-01

    Full Text Available The n-butanol fraction (BF obtained from the crude extract of the marine sponge Petromica citrina, the halistanol-enriched fraction (TSH fraction, and the isolated compounds halistanol sulfate (1 and halistanol sulfate C (2, were evaluated for their inhibitory effects on the replication of the Herpes Simplex Virus type 1 (HSV-1, KOS strain by the viral plaque number reduction assay. The TSH fraction was the most effective against HSV-1 replication (SI = 15.33, whereas compounds 1 (SI = 2.46 and 2 (SI = 1.95 were less active. The most active fraction and these compounds were also assayed to determine the viral multiplication step(s upon which they act as well as their potential synergistic effects. The anti-HSV-1 activity detected was mediated by the inhibition of virus attachment and by the penetration into Vero ce