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Sample records for avoiding cod gadus

  1. Avoidance from petroleum hydrocarbons by the cod (Gadus morhua)

    OpenAIRE

    Bøhle, Bjørn

    1982-01-01

    In laboratory experiments cod was presented a choice situation between different concentrations of petroleum hydrocarbons, appearing as "water soluble fraction" and emulsified droplets derived from Fuel Oil No. 2. In most experiments, the fishes seemed to avoid water containing hydrocarbons, though some fishes for periods was indifferent also to considerable contaminated water. The over all results indicates that a majority of the fishes avoided water containing total hyd...

  2. Selective haddock (Melanogrammus aeglefinus) trawling: Avoiding cod (Gadus morhua) bycatch

    DEFF Research Database (Denmark)

    Krag, Ludvig Ahm; Holst, René; Madsen, Niels;

    2010-01-01

    The critical condition of the North Sea cod stocks has resulted in restrictions on not only cod, but also haddock and other species that are caught together with cod. Thus full exploitation of the haddock stock is unachievable unless cod can be excluded from the haddock catch. We designed a...... collect the escapees, three sampling bags were attached beneath the raised fishing line. The selective haddock trawl reduced the total catch of cod by 55% during the day and 82% at night, and 99% of the marketable haddock was caught during the day and 89% at night. Cod escape rates were highly length...... dependent: smaller cod escaped the trawl in greater numbers than did larger individuals. Whiting, saithe. lemon sole, and plaice were included in the analysis. (C) 2009 Elsevier B.V. All rights reserved....

  3. Avoidance of petroleum hydrocarbons by the cod (Gadus morhua)

    OpenAIRE

    Bøhle, Bjørn

    1986-01-01

    The experimental fish were held in two different aquaria, one with three and one with two compartments. Water containing "water soluble fraction" of Fuel Oil No. 2 was introduced in one of the compartments. By means of light- and sound-based detectors, the amount of time spent by the fish in the various compartments was recorded. Although the results were somewhat contradictory, it seems that the fish avoided water containing more than 100 µg/l of the petroleum hydrocarbons.

  4. Characterization of trypsin forms from Atlantic cod (Gadus morhua)

    OpenAIRE

    Guðrún Birna Jakobsdóttir 1987

    2012-01-01

    Trypsins from Atlantic cod (Gadus morhua) are highly active cold-adapted proteases. The purpose of this project was to characterize a benzamidine purified trypsin isolate from Atlantic cod with special emphasis on trypsin Y. Furthermore, the purpose was to compare the kinetic parameters (kcat, KM and kcat/KM) of cod trypsin Y and cod trypsin I towards various chromogenic substrates. The aim was also to compare the ability of cod trypsin and bovine trypsin to degrade native prot...

  5. Click sounds produced by cod (Gadus morhua)

    Science.gov (United States)

    Vester, Heike I.; Folkow, Lars P.; Blix, A. S.

    2004-02-01

    Conspicuous sonic click sounds were recorded in the presence of cod (Gadus morhua), together with either harp seals (Pagophilus groenlandicus), hooded seals (Cystophora cristata) or a human diver in a pool. Similar sounds were never recorded in the presence of salmon (Salmo salar) together with either seal species, or from either seal or fish species when kept separately in the pool. It is concluded that cod was the source of these sounds and that the clicks were produced only when cod were approached by a swimming predatorlike body. The analyzed click sounds (n=377) had the following characteristics (overall averages +/- S.D.): peak frequency=5.95+/-2.22 kHz peak-to-peak duration=0.70+/-0.45 ms sound pressure level (received level)=153.2+/-7.0 dB re 1 μPa at 1 m. At present the mechanism and purpose of these clicks is not known. However, the circumstances under which they were recorded and some observations on the behavior of the seals both suggest that the clicks could have a predator startling function.

  6. Click sounds produced by cod (Gadus morhua).

    Science.gov (United States)

    Vester, Heike I; Folkow, Lars P; Blix, A S

    2004-02-01

    Conspicuous sonic click sounds were recorded in the presence of cod (Gadus morhua), together with either harp seals (Pagophilus groenlandicus), hooded seals (Cystophora cristata) or a human diver in a pool. Similar sounds were never recorded in the presence of salmon (Salmo salar) together with either seal species, or from either seal or fish species when kept separately in the pool. It is concluded that cod was the source of these sounds and that the clicks were produced only when cod were approached by a swimming predatorlike body. The analyzed click sounds (n = 377) had the following characteristics (overall averages +/- S.D.): peak frequency = 5.95 +/- 2.22 kHz; peak-to-peak duration = 0.70 +/- 0.45 ms; sound pressure level (received level) = 153.2 +/- 7.0 dB re 1 microPa at 1 m. At present the mechanism and purpose of these clicks is not known. However, the circumstances under which they were recorded and some observations on the behavior of the seals both suggest that the clicks could have a predator startling function. PMID:15000203

  7. Cod Gadus morhua and climate change: processes, productivity and prediction

    DEFF Research Database (Denmark)

    Brander, Keith

    2010-01-01

    , predators, parasites and diseases are much more difficult to estimate and predict. Climate can affect all life-history stages through direct and indirect processes and although the consequences in terms of growth, survival and reproductive output can be monitored, it is often difficult to determine...... the causes. Investigation of cod Gadus morhua populations across the whole North Atlantic Ocean has shown large-scale patterns of change in productivity due to lower individual growth and condition, caused by large-scale climate forcing. If a population is being heavily exploited then a drop in productivity...... can push it into decline unless the level of fishing is reduced: the idea of a stable carrying capacity is a dangerous myth. Overexploitation can be avoided by keeping fishing mortality low and by monitoring and responding rapidly to changes in productivity. There are signs that this lesson has been...

  8. The hypoxia avoidance behaviour of juvenile Atlantic cod (Gadus morhua L.) depends on the provision and pressure level of an O2 refuge

    DEFF Research Database (Denmark)

    Herbert, Neill A.; Skjaeraasen, Jon E.; Nilsen, Trygve; Salvanes, Anne G. V.; Steffensen, John Fleng

    2011-01-01

    The frequency of low O(2) (hypoxia) has increased in coastal marine areas but how fish avoid deleterious water masses is not yet clear. To assess whether the presence and oxygen pressure (PO(2)) level of an O(2) refuge affects the hypoxia avoidance behaviour of fish, individual Atlantic cod (Gadus...... morhua L.) were exposed to a range of O(2) choices in a 2-way choice chamber at 11.4 degrees C over two different experiments. Cod in the first experiment were allowed access to a fixed O(2) refuge (fully air-saturated seawater) whilst oxygen pressure (PO(2)) on the other side was reduced in steps to a...... exposed to 4.3 kPa but the safety, i.e. PO(2), of the refuge was reduced. Fish not only spent less time at 4.3 kPa as a result of fewer sampling visits but they also swam at considerably slower speeds. The presence of an avoidance response was thus strongly related to refuge PO(2) and it is unlikely that...

  9. Review of western Baltic cod (Gadus morhua) recruitment dynamics

    DEFF Research Database (Denmark)

    Hüssy, Karin

    2011-01-01

    Important processes in the recruitment dynamics of western Baltic cod (Gadus morhua) are identified. Spawning areas are in the deep, saline waters below 20–40 m, depending on area topography. Spatial distribution remains relatively stable over time. Peak spawning shows an area-specific pattern...

  10. Excess post hypoxic oxygen consumption in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Plambech, M.; Deurs, Mikael van; Steffensen, J.F.; Tirsgaard, B.; Behrens, Jane

    2013-01-01

    Atlantic cod Gadus morhua experienced oxygen deficit (DO2 ) when exposed to oxygen levels below their critical level (c. 73% of pcrit) and subsequent excess post-hypoxic oxygen consumption (CEPHO) upon return to normoxic conditions, indicative of an oxygen debt. The mean±s.e. CEPHO:DO2 was 6...

  11. Automatic grunt detector and recognizer for Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Urazghildiiev, Ildar R; Van Parijs, Sofie M

    2016-05-01

    Northwest Atlantic cod (Gadus morhua) have been heavily overfished in recent years and have not yet recovered. Passive acoustic technology offers a new approach to identify the spatial location of spawning fish, as well as their seasonal and long term persistence in an area. To date, the lack of a species-specific detector has made searching for Atlantic cod grunts in large amounts of passive acoustic data cumbersome. To address this problem, an automatic grunt detection and recognition algorithm that processes yearlong passive acoustic data recordings was designed. The proposed technique is a two-stage hypothesis testing algorithm that includes detecting and recognizing all grunt-like sounds. Test results demonstrated that the algorithm provided a detection probability of 0.93 for grunts with a signal-to-noise ratio (SNR) higher than 10 dB, and a detection probability of 0.8 for grunts with the SNR ranging from 3 to 10 dB. This detector is being used to identify cod in current and historical data from U.S. waters. Its use has significantly reduced the time required to find and validate the presence of cod grunts. PMID:27250148

  12. Digestibility of chitin in cod, Gadus morhua, in vivo

    Science.gov (United States)

    Danulat, Eva

    1987-12-01

    Sixteen cod, Gadus morhua (L.), were individually fed a single ration of shrimps, Crangon allmanni. Four fish were killed and examined 6, 12, 24 and 48 h after the fish had been fed. Chitinase activities were measured in the extracts of stomach contents, stomach tissue, pyloric caecae, intestinal contents and intestinal tissue. The level of enzyme activity in different parts of the digestive tract was shown to be dependent on the phase of the digestive process. High concentrations of the chitin degradation product N-acetyl-D-glucosamine were determined in the stomach and in the intestinal contents. Based on the chitin concentration in the food organisms and the individual food uptake, the amount of chitin consumed by each fish could be calculated. Only up to 9% of the ingested chitin was recovered from the intestinal contents of the fish at any given time after feeding (6, 12, 24 and 48 h). In addition, only 2.4% of the chitin consumed with the food could be recovered in the collected faeces of the fish. The 4 cod killed 48 h after feeding had completely emptied their stomach. Chitin digestion in these fish was calculated to have been 90%.

  13. Occurrence of anisakid nematodes in Atlantic cod (Gadus morhua) and Greenland cod (Gadus ogac), West Greenland

    DEFF Research Database (Denmark)

    Mouritsen, Kim N.; Hedeholm, Rasmus; Schack, Henriette B.;

    2010-01-01

    Anisakid nematodes commonly infect gadids, and are of economic and aesthetic importance to the commercial fishing industry in Greenland as some species are pathogenic to humans. However, very little is known about the occurrence of these parasites and their impact on the hosts in Greenland waters...... both nematode species regarding prevalence of infection and mean infection intensity was evident, and there was no relationship between fish condition and the intensity of nematode infections. Standardised for size, capelin-eating cod were in better condition and more heavily infected than fish...

  14. Atlantic cod (Gadus morhua) CC chemokines: Diversity and expression analysis.

    Science.gov (United States)

    Borza, Tudor; Stone, Cynthia; Rise, Matthew L; Bowman, Sharen; Johnson, Stewart C

    2010-08-01

    Chemokines are a large, diverse group of small cytokines that can be classified into several families, including the CC chemokines that are characterized by two adjacent cysteines near their amino terminus. CC chemokines play a pivotal role in host defense mechanisms by inducing leukocyte chemotaxis under physiological and inflammatory conditions. Analysis of CC chemokines from teleost fishes indicates that the number of CC chemokine genes and their tissue expression patterns vary largely in this group of vertebrates. Here we describe 32 distinct CC chemokine sequences from Atlantic cod (Gadus morhua) identified by analysis of approximately 206,000 ESTs. Phylogenetic analysis of Atlantic cod CC chemokines placed these sequences in seven clusters, most likely resulting from species-specific gene duplications, and two unique sequences; 12 of these CC chemokines, including at least one member of each cluster, were analyzed by QPCR using four immune-related tissues (head kidney, liver, spleen and blood) obtained from unstimulated, polyriboinosinic polyribocytidylic acid (pIC)-stimulated and formalin-killed atypical Aeromonas salmonicida-stimulated individuals. EST abundance and QPCR analysis indicate that the expression of closely related CC chemokines GmSCYA101 and GmSCYA102, GmSCYA108 and GmSCYA109 or GmSCYA122 and GmSCYA124 can be highly tissue-specific despite substantial sequence identity. Stimulation with the viral mimic pIC or formalin-killed atypical A. salmonicida resulted in increased expression of most of the CC chemokines, indicating that they can be regarded as either inducible (inflammatory) or dual-function rather than constitutive (homeostatic). Tissue specificity, and the level of induction, varied broadly; for example, GmSCYA123 was at least 4-fold up-regulated by both inducers in all tissues analyzed, whereas pIC increased the expression of GmSCYA124 in liver over 1500 times. PMID:20381521

  15. Population genetic structure in gadoid fish with focus on Atlantic cod Gadus morhua

    OpenAIRE

    Guðni Magnús Eiríksson 1970

    2015-01-01

    In the present study genetic variation and population genetic structure in spawning Atlantic cod, Gadus morhua, around Iceland was examined. Earlier research on population genetic structure in cod has not been conclusive and the use of different molecular methods have shown different patterns. It is important to determine why different methods show different patterns in order to describe the population genetic structure in cod. In the present study both microsatellite DNA variation and mitoch...

  16. Geolocation of North Sea cod (Gadus morhua) using Hidden Markov Models and behavioural switching

    DEFF Research Database (Denmark)

    Pedersen, Martin Wæver; Righton, David; Thygesen, Uffe Høgsbro; Andersen, Ken Haste; Madsen, Henrik

    2008-01-01

    When geolocating fish based on archival tag data, a realistic assessment of uncertainty is essential. Here, we describe an application of a novel Fokker–Planck-based method to geolocate Atlantic cod (Gadus morhua) in the North Sea area. In this study, the geolocation relies mainly on matching tidal...... patterns in depth measurements when a fish spends a prolonged period of time at the seabed with a tidal database. Each day, the method provides a nonparametric probability distribution of the position of a tagged fish and therefore avoids enforcing a particular distribution, such as a Gaussian distribution....... In addition to the tidal component of the geolocation, the model incoporates two behavioural states, either high or low activity, estimated directly from the depth data, that affect the diffusivity parameter of the model and improves the precision and realism of the geolocation significantly. The new...

  17. Atlantic cod (Gadus morhua hemoglobin genes: multiplicity and polymorphism

    Directory of Open Access Journals (Sweden)

    Gamperl A Kurt

    2009-09-01

    Full Text Available Abstract Background Hemoglobin (Hb polymorphism, assessed by protein gel electrophoresis, has been used almost exclusively to characterize the genetic structure of Atlantic cod (Gadus morhua populations and to establish correlations with phenotypic traits such as Hb oxygen binding capacity, temperature tolerance and growth characteristics. The genetic system used to explain the results of gel electrophoresis entails the presence of one polymorphic locus with two major alleles (HbI-1; HbI-2. However, vertebrates have more than one gene encoding Hbs and recent studies have reported that more than one Hb gene is present in Atlantic cod. These observations prompted us to re-evaluate the number of Hb genes expressed in Atlantic cod, and to perform an in depth search for polymorphisms that might produce relevant phenotypes for breeding programs. Results Analysis of Expressed Sequence Tags (ESTs led to the identification of nine distinct Hb transcripts; four corresponding to the α Hb gene family and five to the β Hb gene family. To gain insights about the Hb genes encoding these transcripts, genomic sequence data was generated from heterozygous (HbI-1/2 parents and fifteen progeny; five of each HbI type, i.e., HbI-1/1, HbI-1/2 and HbI-2/2. β Hb genes displayed more polymorphism than α Hb genes. Two major allele types (β1A and β1B that differ by two linked non-synonymous substitutions (Met55Val and Lys62Ala were found in the β1 Hb gene, and the distribution of these β1A and β1B alleles among individuals was congruent with that of the HbI-1 and HbI-2 alleles determined by protein gel electrophoresis. RT-PCR and Q-PCR analysis of the nine Hb genes indicates that all genes are expressed in adult fish, but their level of expression varies greatly; higher expression of almost all Hb genes was found in individuals displaying the HbI-2/2 electrophoretic type. Conclusion This study indicates that more Hb genes are present and expressed in adult

  18. Multidimensionality of behavioural phenotypes in Atlantic cod, Gadus morhua.

    Science.gov (United States)

    Meager, Justin J; Fernö, Anders; Skjæraasen, Jon Egil; Järvi, Torbjörn; Rodewald, Petra; Sverdrup, Gisle; Winberg, Svante; Mayer, Ian

    2012-06-25

    Much of the inter-individual variation observed in animal behaviour is now attributed to the existence of behavioural phenotypes or animal personalities. Such phenotypes may be fundamental to fisheries and aquaculture, yet there have been few detailed studies of this phenomenon in exploited marine animals. We investigated the behavioural and neuroendocrine responses of Atlantic cod (Gadus morhua L.), to situations reflecting critical ecological challenges: predator attacks and territorial challenges. Both hatchery-reared and wild fish were tested and behavioural profiles were compared with baseline conditions. We then used an objective, multivariate approach, rather than assigning individuals along one-dimensional behavioural axes, to examine whether distinct behavioural phenotypes were present. Our results indicate that two distinct behavioural phenotypes were evident in fish from each background. In hatchery-reared fish, phenotypes displayed divergent locomotor activity, sheltering, brain monoamine concentrations and responses to competitive challenges. In wild fish, phenotypes were distinguished primarily by locomotor activity, sheltering and responsiveness to predator stimuli. Hatcheries presumably represent a more stressful social environment, and social behaviour and neuroendocrine responses were important in discerning behavioural phenotypes in hatchery fish, whereas antipredator responses were important in discerning phenotypes in wild fish that have previously encountered predators. In both fish types, behavioural and physiological traits that classified individuals into phenotypes were not the same as those that were correlated across situations. These results highlight the multidimensionality of animal personalities, and that the processes that regulate one suite of behavioural traits may be very different to the processes that regulate other behaviours. PMID:22465310

  19. Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Hansen, Jakob Hemmer; Hedeholm, R.B.;

    2013-01-01

    Accurate prediction of species distribution shifts in the face of climate change requires a sound understanding of population diversity and local adaptations. Previous modeling has suggested that global warming will lead to increased abundance of Atlantic cod (Gadus morhua) in the ocean around Gr...

  20. Fathers modify thermal reaction norms for hatching success in Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Dahlke, Flemming T.; Politis, Sebastian Nikitas; Butts, Ian;

    2016-01-01

    therefore hold important implications for resilience. This study examined how males differ in their ability to sire viable offspring and whether the paternal contribution modified thermal reaction norms for hatching success in two replicated trials with cod Gadus morhua from the Northwest Atlantic (trial 1...

  1. Distribution and drift of Atlantic cod ( Gadus morhua ) eggs and larvae in Greenland offshore waters

    DEFF Research Database (Denmark)

    Wieland, Kai; Hovgård, Holger

    2002-01-01

    Catches of Atlantic cod (Gadus morhua) eggs and larvae from 45 national and international ichthyoplankton surveys conducted in Greenland offshore waters during the period 1950 to 1984 have been compiled and re-analysed. Southeast and Southwest Greenland were identified as im- portant spawning are...

  2. Vaccination of Atlantic cod (Gadus morhua L.) against atypical furunculosis using different adjuvants

    OpenAIRE

    Hamid, Lemia M.O

    2003-01-01

    In recent years increased attention has been focussed on fish vaccines and vaccination against diseases in farmed fish. In this study, efficacy and side effects of vaccination against atypical furunculosis in Atlantic cod (Gadus morhua L.) were studied in an experimental trial by using different adjuvants. The different adjuvanted vaccines were administered by intraperitoneal injection (i.p.) to Atlantic cod. The adjuvants used were CpG DNA, Aluminium hydroxide (Alhydrogel), an...

  3. Precautionary management of Baltic Sea cod (Gadus morhua callaris) under different harvesting and environmental scenarios.

    OpenAIRE

    Isomaa, Marleena

    2015-01-01

    The purpose of this thesis was to increase knowledge of heavily harvested cod stock dynamics and attain information for more suitable and sustainable management strategies. Achieving sustainable management strategies requires sufficient knowledge about the population dynamics. One tool for research this is to introduce stochastic variation models in investigated species stock dynamics. As a model species we use eastern Baltic Sea cod (Gadus morhua callarias), where the population dynamics are...

  4. Growth, temperature and density relationships of North Sea cod ( Gadus morhua )

    DEFF Research Database (Denmark)

    Rindorf, Anna; Jensen, Henrik; Schrum, Corinna

    2008-01-01

    temperature; however, although temperature increased, distribution of 1-year-olds changed concurrently and no increase in length at age 1 occurred. Growth from age 1 to age 2 decreased as ambient biomass of sandeel and density of cod decreased, whereas growth of cod older than 2 years decreased with......This study presents an analysis of the relationship between ambient temperature, cod density, fishing mortality, prey fish biomass, and growth of North Sea cod (Gadus morhua) as estimated from survey catches during the period from 1983 to 2006. Growth of young cod was positively related to...... increasing density of cod and increased with increasing biomass of demersal fish prey. Though growth of juveniles was strongly positively correlated to ambient temperature, no indication of direct temperature limitation of growth of older North Sea cod was found....

  5. Ribosomal RNA gene sequences confirm that protistan endoparasite of larval cod Gadus morhua is Ichthyodinium sp

    DEFF Research Database (Denmark)

    Skovgaard, Alf; Meyer, Stefan; Overton, Julia Lynne; Støttrup, Josianne; Buchmann, Kurt

    2010-01-01

    An enigmatic protistan endoparasite found in eggs and larvae of cod Gadus morhua and turbot Psetta maxima was isolated from Baltic cod larvae, and DNA was extracted for sequencing of the parasite's small Subunit ribosomal RNA (SSU rRNA) gene. The endoparasite has previously been suggested to be...... related to Ichthyodinium chabelardi, a dinoflagellate-like protist that parasitizes yolk sacs of embryos and larvae of a variety of fish species. Comparison of a 1535 bp long fragment of the SSU rRNA gene of the cod endoparasite showed absolute identify with I. chabelardi, demonstrating that the 2...

  6. Using interview-based recall surveys to estimate cod Gadus morhua and eel Anguilla anguilla harvest in Danish recreational fishing

    OpenAIRE

    Sparrevohn, Claus Reedtz; Storr-Paulsen, Marie

    2012-01-01

    Using interview-based recall surveys to estimate cod Gadus morhua and eel Anguilla anguilla harvest in Danish recreational fishing. – ICES Journal of Marine Science, 69: 323–330.Marine recreational fishing is a popular outdoor activity in Denmark, practised by both anglers and passive gear fishers. However, the impact on the targeted stocks is unknown, so to estimate the 2009 harvest of cod Gadus morhua and eel Anguilla anguilla, two separate interview-based surveys were initiated and carried...

  7. Linking lipid dynamics with the reproductive cycle in Baltic cod Gadus morhua

    DEFF Research Database (Denmark)

    Røjbek, Maria; Jacobsen, Charlotte; Tomkiewicz, Jonna;

    2012-01-01

    of Baltic cod from spring/early summer to midsummer since the early 1990s remain unresolved and may partly be diet related. This study demonstrated that a substantial amount of lipid was invested in cod ovarian development, and that lipid composition varied substantially with the reproductive cycle......This study describes lipid composition and antioxidants of Baltic cod Gadus morhua L. during the reproductive cycle, and investigates whether they reflect its dominant prey and whether levels of fatty acids important for reproductive performance were low. Reasons for a shift in peak spawning time...... in cod diet, while the level of 16:1n-7 and astaxanthin indicated the presence of the isopod Saduria entomon in cod diet. It is likely that food web alterations in the Baltic ecosystem related to environmental and hydrographic changes caused a decrease in ARA availability. Low ARA content coincides...

  8. Analysing migrations of Atlantic cod Gadus morhua in the north‐east Atlantic Ocean

    DEFF Research Database (Denmark)

    Neuenfeldt, S.; Righton, D.; Neat, F.;

    2013-01-01

    be measured directly but has to be estimated using the available data on light, temperature, pressure and salinity. The reconstructed locations based on advanced estimation techniques have been termed geolocations. Examples are discussed which illustrate the applicability of geolocations in...... state-of-the-art geolocations for cod Gadus morhua in the north-east Atlantic Ocean, the major aim of this review is to raise awareness of gaps in knowledge and to identify ideas for new research...

  9. Effects of alkylphenols (C4-C7) on the reproductive system of Atlantic cod (Gadus morhua)

    OpenAIRE

    Meier, Sonnich

    2007-01-01

    The work in this thesis is a part of a strategic work at the Institute of Marine Research, which aims to develop a variety of methods to be used in investigating potential endocrine disruption in Atlantic cod (Gadus morhua). Produced water, a by-product of offshore oil production, contains significant amounts of alkylphenols (APs). Many studies have shown that long-chain para-substituated APs cause endocrine disruption in freshwater fish, but relatively little is currently know...

  10. Male size composition affects male reproductive variance in Atlantic cod Gadus morhua L. spawning aggregations

    DEFF Research Database (Denmark)

    Bekkevold, Dorte

    2006-01-01

    Estimates of Atlantic cod Gadus morhua reproductive success, determined using experimental spawning groups and genetic paternity assignment of offspring, showed that within-group variance in male size correlated positively with the degree of male mating skew, predicting a decrease in male...... reproductive skew with decreasing size variation among males under natural conditions. (c) 2006 The Author Journal compilation (c) 2006 The Fisheries Society of the British Isles...

  11. Differences in salinity tolerance and gene expression between two populations of Atlantic cod (Gadus morhua) in response to salinity stress

    DEFF Research Database (Denmark)

    Larsen, Peter Foged; Eg Nielsen, Einar; Meier, Kristian; Olsvik, P.A.; Hansen, M.M.; Loeschcke, V.

    salinity tolerance and gene expression among Atlantic cod (Gadus morhua) from two populations distributed across a steep salinity gradient, we observed high mortality (45% North Sea cod and 80% Baltic Sea cod) in a reciprocal common garden setup. Quantitative RT-PCR assays for expression of hsp70 and Na...... findings strongly suggest that Atlantic cod are adapted to local saline conditions, despite relatively low levels of neutral genetic divergence between populations...

  12. Spatial and temporal distribution of Pacific cod Gadus macrocephalus juveniles in Mutsu Bay, Japan

    OpenAIRE

    Takatsu, Tetsuya; Yoshida, Yasuyuki; KOOKA, Kouji; Sugimoto, Kouichi; Takahashi, Toyomi

    2001-01-01

    The spatial distributions of Pacific cod (Gadus macrocephalus) juveniles and their food organisms were examined in Mutsu Bay from April to July during 1988-1997. In April, large larvae (≤25 mm in total length (TL)) and pelagic juveniles (>25 mm TL) were widely distributed in the bay, and were concentrated at the same depths as calanoid copepodites during daylight hours. Geographical changes in cod TLs might have been due to transport by the Tsugaru Warm Current. After mid- and late May, juven...

  13. Do North Sea cod (Gadus morhua) fisheries maintain high catch rates at low stock size?

    DEFF Research Database (Denmark)

    Rindorf, Anna; Andersen, Bo Sølgaard

    2008-01-01

    This study presents all investigation of the relationship between stock size of North Sea cod (Gadus morhua) and catch rates in seven commercial fishing fleets. The shape of the relationship was estimated using a model allowing both density-dependent changes in catchability and bias in the...... change was insufficient to compensate for the decrease in stock size, and catch rates of all fleets decreased. Two factors that could lead to nonconstant catchability were investigated: (i) the presence of decoupling between stock size and density ill high-density areas and (ii) the presence of...... concurrent shifts in the spatial distribution of the cod stock and the cod fishery. No evidence of the former was found but there was a northern shift in the spatial distribution of both effort and the cod stock....

  14. Structure of chymotrypsin variant B from Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Leth-Larsen, Rikke; Asgeirsson, B; Thórólfsson, M;

    1996-01-01

    The amino-acid sequence of chymotrypsin variant B isolated from the pyloric caeca of Atlantic cod has been elucidated. The characterization of the primary structure is based on N-terminal Edman degradation and mass spectrometry of the native protein and enzymatically derived peptides. Chymotrypsi...

  15. Atlantic Cod (Gadus morhua benefits from the availability of seagrass (Zostera marina nursery habitat

    Directory of Open Access Journals (Sweden)

    Richard J. Lilley

    2014-12-01

    Full Text Available The Atlantic cod (Gadus morhua is a species of significant economic and historic importance but infamous for its decline. Apart from overfishing, the causes of this decline and its subsequent lack of recovery remain largely unresolved. Indeed, the degree to which specific habitats are important for this species remains unquantified at the scale of North Atlantic. Here, the literature on the role of eelgrass meadows (Zostera marina as valuable nursery habitat for the Atlantic cod is reviewed and synthesized. Evidence is presented on relative densities of Atlantic cod in shallow water environments and in eelgrass meadows in comparison to alternative habitats. In addition, evidence pertaining to the ’viability gains’ attributed to the use of eelgrass meadows as nursery habitat (growth and survival by juvenile Atlantic cod is analyzed. Although juvenile Atlantic cod use of Z. marina is found to be facultative, when possible, available literatures indicates that they may select Z. marina as a nursery habitat where they are found in high density (average of at least 246 ha−1. From their use of Z. marina habitat the juvenile Atlantic cod receives viability benefits from it, improving their chances of reaching maturation. This paper provides strong evidence that eelgrass meadows are of significant importance to contributing to Atlantic cod stocks.

  16. Effect of produced water on cod (Gadus morhua) immune responses

    Energy Technology Data Exchange (ETDEWEB)

    Hamoutene, D.; Mabrouk, G.; Samuelson, S.; Mansour, A.; Lee, K. [Fisheries and Oceans Canada, Dartmouth, NS (Canada). Maritimes Region, Ocean Sciences Division; Volkoff, H.; Parrish, C. [Memorial Univ. of Newfoundland, St. John' s, NL (Canada); Mathieu, A. [Oceans Ltd., St. John' s, NL (Canada)

    2007-07-01

    Studies have shown that produced water (PW) discharged from North Sea offshore platforms affects the biota at greater distances from operational platforms than originally presumed. According to PW dispersion simulations, dilution by at least 240 times occurs within 50-100 m, and up to 9000 times by 20 km from the discharge. In this study, the effect of PW on cod immunity was investigated by exposing fish to 0, 100 ppm (x 10,000 dilution) or 200 ppm (x 500) of PW for 76 days. Immune responses were evaluated at the end of the exposure. Fish from the 3 groups were injected with Aeromonas salmonicida lipopolysaccharides (LPS). Blood cell observation and flow cytometry were used to investigate the serum cortisol levels and gill histology along with ratios and respiratory burst (RB) responses of both circulating and head-kidney white blood cells (WBCs). The study revealed that baseline immunity and stress response were not affected by PW, other than an irritant-induced change in gill cells found in treated cod. In all groups, LPS injection resulted in a pronounced decrease in RB of head-kidney cells and an increase in serum cortisol and protein levels. However, the group exposed to 200 ppm of PW exhibited the most significant changes. LPS injection was also shown to influence WBC ratios, but further studies are needed to determine if this impact is stronger in fish exposed to PW. This study suggested an effect of PW on cod immunity after immune challenge with LPS.

  17. Effect of produced water on cod (Gadus morhua) immune responses

    International Nuclear Information System (INIS)

    Studies have shown that produced water (PW) discharged from North Sea offshore platforms affects the biota at greater distances from operational platforms than originally presumed. According to PW dispersion simulations, dilution by at least 240 times occurs within 50-100 m, and up to 9000 times by 20 km from the discharge. In this study, the effect of PW on cod immunity was investigated by exposing fish to 0, 100 ppm (x 10,000 dilution) or 200 ppm (x 500) of PW for 76 days. Immune responses were evaluated at the end of the exposure. Fish from the 3 groups were injected with Aeromonas salmonicida lipopolysaccharides (LPS). Blood cell observation and flow cytometry were used to investigate the serum cortisol levels and gill histology along with ratios and respiratory burst (RB) responses of both circulating and head-kidney white blood cells (WBCs). The study revealed that baseline immunity and stress response were not affected by PW, other than an irritant-induced change in gill cells found in treated cod. In all groups, LPS injection resulted in a pronounced decrease in RB of head-kidney cells and an increase in serum cortisol and protein levels. However, the group exposed to 200 ppm of PW exhibited the most significant changes. LPS injection was also shown to influence WBC ratios, but further studies are needed to determine if this impact is stronger in fish exposed to PW. This study suggested an effect of PW on cod immunity after immune challenge with LPS

  18. Environmental effects on recruitment and implications for biological reference points of Eastern Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Köster, Fritz; Vinther, Morten; MacKenzie, Brian; Eero, Margit; Plikshs, Maris

    2009-01-01

    The decline of the Eastern Baltic cod (Gadus morhua) stock from highest to lowest stock levels on record throughout the 1980s and early 1990s was caused by a combination of recruitment failure and increasing fishing pressure at declining stock sizes. The processes driving the reproductive success...... fishing mortality or the limit biomass reference point is indicated. However, an accepted methodology to determine these reference points in situations of changing stock productivity or system carrying capacity does not exist. Environmental conditions affecting recruitment matter not only for the...

  19. Heteroplasmy of Short Tandem Repeats in Mitochondrial DNA of Atlantic Cod, Gadus Morhua

    OpenAIRE

    Arnason, E.; RAND, D. M.

    1992-01-01

    The mitochondrial DNA of the Atlantic cod (Gadus morhua) contains a tandem array of 40-bp repeats in the D-loop region of the molecule. Variation among molecules in the copy number of these repeats results in mtDNA length variation and heteroplasmy (the presence of more than one form of mtDNA in an individual). In a sample of fish collected from different localities around Iceland and off George's Bank, each individual was heteroplasmic for two or more mtDNAs ranging in repeat copy number fro...

  20. Seasonal prevalence and intensity of follicular atresia in Baltic cod Gadus morhua callarias L

    DEFF Research Database (Denmark)

    Kraus, Gerd; Tomkiewicz, Jonna; Diekmann, R.; Köster, Fritz

    2008-01-01

    In the present study, 307 ovaries of eastern Baltic cod Gadus morhua callarias sampled during the prespawning and spawning season 2000 were analysed histologically to estimate the seasonal prevalence and intensity of atresia. The number of atretic oocytes per ovary was estimated using a combination...... of the physical disector method and volume fraction (Delesse principle). Atretic oocytes were observed in 32% of the ovaries. Prevalence of atresia was independent of female size, but increased significantly with declining female condition from prespawning and through the spawning stages. The...... population egg loss due to atresia amounted to 4.6% indicating that Baltic cod was performing close to maximum productivity, i.e. potential egg production. (c) 2008 The Authors Journal compilation (c) 2008 The Fisheries Society of the British Isles....

  1. Parasites of wild cod postlarvae (Gadus morhua L.) in the North Sea

    DEFF Research Database (Denmark)

    Kuhn, Jesper; Kania, Per W.; Skovgaard, Alf;

    The Atlantic cod, Gadus morhua L. is a common and commercially important fish species in the North Sea, but estimated stock size and recruitment has been on an overall declining path since 1980. Atlantic cod is in this sense believed in the future to become one of the most intensively cultivated...... gadoid species in the North Atlantic and has been the subject of several parasitological studies. Past research is however primarily concentrated around adult or juvenile fish and our knowledge concerning the larval stage is very sparse. This is in spite of the general belief that at this stage, fish...... Hysterothylacium aduncum, 5 trematodes (1 Lecithaster levinseni, 4 Hemiurus) and 5 individuals of a tetraphyllidean plerocercoid cestode larva. Intensity, abundance and prevalence will be presented as well as area of infection. Brief introduction to the parasites and known literature on the parasitic effect will...

  2. Growth pattern and growth dependent mortality of larval and pelagic juvenile North Sea cod Gadus morhua

    DEFF Research Database (Denmark)

    Nielsen, Rune; Munk, Peter

    2004-01-01

    . Otolith radius and larval standard length were highly correlated, and otolith growth was used as a measure of larval somatic growth. The larvae were divided into 3 groups dependent on their hatch-date, and for each hatch group, the same period of past growth was compared between fish sampled in April and...... May. A 2-way repeated-measurement ANOVA revealed a significant higher past growth of fish sampled in May in 2 of the 3 hatch-groups, implying a higher mortality of the slow growing larvae. Additionally, otolith size at age differed significantly between the April and May sampling of the oldest larvae......We investigated growth patterns and evidence of growth dependent survival for a population of Atlantic cod Gadus morhua using analysis of their otolith microstructure. Central concentrations of a population of cod larvae and juveniles in the north-eastern North Sea were sampled twice (in April and...

  3. Effect of temperature on quality-related changes in cod (Gadus morhua) during short- and long-term frozen storage

    DEFF Research Database (Denmark)

    Burgaard, Maria Garver; Jørgensen, Bo

    2010-01-01

    Cod (Gadus morhua) was stored at eight temperatures (-10 to -80 degrees C) for 1 to 18 months, after which quality indicators were measuredincluding drip loss, water holding capacity, low field NMR spin-spin relaxation, color, amount of thiobarbituric acid reactive substances, and sarcoplasmic...

  4. New species in the genus Francisella (Gammaproteobacteria; Francisellaceae); Francisella piscicida sp. nov. isolated from cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Ottem, Karl F; Nylund, Are; Karlsbakk, Egil; Friis-Møller, Alice; Krossøy, Bjørn; Knappskog, Dag

    2007-01-01

    A Francisella strain, GM2212, previously isolated from moribund farmed Atlantic cod (Gadus morhua) in Norway, is closely related to Francisella philomiragia among Francisella spp. according to its complete 16S rDNA, 16S-23S intergenic spacer, 23S rDNA, 23S-5S intergenic spacer, 5S rDNA, FopA, lip...

  5. Characterization of Francisella sp., GM2212, the first Francisella isolate from marine fish, Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Ottem, Karl F; Nylund, Are; Karlsbakk, Egil; Friis-Møller, Alice; Krossøy, Bjørn

    2007-01-01

    A Francisella sp., isolate GM2212(T), previously isolated from diseased farmed Atlantic cod Gadus morhua in Norway is characterized. The complete 16S rDNA, 16S-23S intergenic spacer, 23S rDNA, 23S-5S intergenic spacer, 5S rDNA, FopA, lipoprotein TUL4 (LpnA), malate dehydrogenase and a hypothetica...

  6. Walking the cod: an investigation into the relative robustness of cod, Gadus morhua, skeletal elements

    Directory of Open Access Journals (Sweden)

    Andrew K.G. Jones

    1999-12-01

    Full Text Available A simple experiment is described which details what happens to the bones of cod when they are walked on by a man. The pattern of fragmentation for various elements is illustrated and an index of robustness proposed for those elements in a cod skeleton most frequently recovered from archaeological sites.

  7. Effects of Loma morhua (Microsporidia) infection on the cardiorespiratory performance of Atlantic cod Gadus morhua (L).

    Science.gov (United States)

    Powell, M D; Gamperl, A K

    2016-02-01

    The microsporidian Loma morhua infects Atlantic cod (Gadus morhua) in the wild and in culture and results in the formation of xenomas within the gill filaments, heart and spleen. Given the importance of the two former organs to metabolic capacity and thermal tolerance, the cardiorespiratory performance of cod with a naturally acquired infection of Loma was measured during an acute temperature increase (2 °C h(-1) ) from 10 °C to the fish's critical thermal maximum (CTMax ). In addition, oxygen consumption and swimming performance were measured during two successive critical swimming speed (Ucrit ) tests at 10 °C. While Loma infection had a negative impact on cod cardiac function at warm temperatures, and on metabolic capacity in both the CTMax and Ucrit tests (i.e. a reduction of 30-40%), it appears that the Atlantic cod can largely compensate for these Loma-induced cardiorespiratory limitations. For example, (i) CTMax (21.0 ± 0.3 °C) and Ucrit (~1.75 BL s(-1) ) were very comparable to those reported in previous studies using uninfected fish from the same founder population; and (ii) our data suggest that tissue oxygen extraction, and potentially the capacity for anaerobic metabolism, is enhanced in fish infected with this microsporidian. PMID:25683657

  8. Predation rates by North Sea cod (Gadus morhua) - Predictions from models on gastric evacuation and bioenergetics

    Science.gov (United States)

    Hansson, S.; Rudstam, L. G.; Kitchell, J.F.; Hilden, M.; Johnson, B.L.; Peppard, P.E.

    1996-01-01

    We compared four different methods for estimating predation rates by North Sea cod (Gadus moi hua). Three estimates, based on gastric evacuation rates, came from an ICES multispecies working group and the fourth from a bioenergetics model. The bioenergetics model was developed from a review of literature on cod physiology. The three gastric evacuation rate models produced very different prey consumption estimates for small (2 kg) fish. For most size and age classes, the bioenergetics model predicted food consumption rates intermediate to those predicted by the gastric evacuation models. Using the standard ICES model and the average population abundance and age structure for 1974-1989, annual, prey consumption by the North Sea cod population (age greater than or equal to 1) was 840 kilotons. The other two evacuation rate models produced estimates of 1020 and 1640 kilotons, respectively. The bioenergetics model estimate was 1420 kilotons. The major differences between models were due to consumption rate estimates for younger age groups of cod. (C) 1996 International Council for the Exploration of the Sea

  9. Bacterial Colonization of Cod (Gadus morhua L.) and Halibut (Hippoglossus hippoglossus) Eggs in Marine Aquaculture

    Science.gov (United States)

    Hansen, Geir Høvik; Olafsen, Jan A.

    1989-01-01

    Aquaculture has brought about increased interest in mass production of marine fish larvae. Problems such as poor egg quality and mass mortality of fish larvae have been prevalent. The intensive incubation techniques that often result in bacterial overgrowth on fish eggs could affect the commensal relationship between the indigenous microflora and opportunistic pathogens and subsequently hamper egg development, hatching, larval health, and ongrowth. Little information about the adherent microflora on fish eggs is available, and the present study was undertaken to describe the microbial ecology during egg development and hatching of two fish species of potential commercial importance in marine aquaculture. Attachment and development of the bacterial flora on cod (Gadus morhua L.) eggs from fertilization until hatching was studied by scanning electron microscopy. The adherent microflora on cod (G. morhua L.) and halibut (Hippoglossus hippoglossus) eggs during incubation was characterized and grouped by cluster analysis. Marked bacterial growth could be demonstrated 2 h after fertilization, and at hatching eggs were heavily overgrown. Members of the genera Pseudomonas, Alteromonas, Aeromonas, and Flavobacterium were found to dominate on the surface of both cod and halibut eggs. The filamentous bacterium Leucothrix mucor was found on eggs from both species. While growth of L. mucor on halibut eggs was sparse, cod eggs with a hairy appearance due to overgrowth by this bacterium close to hatching were frequently observed. Vibrio fischeri could be detected on cod eggs only, and pathogenic vibrios were not detected. Members of the genera Moraxella and Alcaligenes were found only on halibut eggs. Caulobacter and Seliberia spp. were observed attached to eggs dissected from cod ovaries under sterile conditions, indicating the presence of these bacteria in ovaries before spawning. Adherent strains did not demonstrate antibiotic resistance above a normal level. Attempts to

  10. Temperature-mediated survival, development and hatching variation of Pacific cod Gadus macrocephalus eggs.

    Science.gov (United States)

    Bian, X; Zhang, X; Sakrai, Y; Jin, X; Gao, T; Wan, R; Yamamoto, J

    2014-01-01

    Laboratory-validated data on the survival, development and hatching responses of fertilized Pacific cod Gadus macrocephalus eggs from the northern Japan stock were determined through an incubation experiment. The optimum temperature for survival until hatching ranged from 4 to 8°C. No significant difference in development rates was found between the populations from Mutsu Bay, Japan, and western Canadian coastal waters even though the samples may belong to different G. macrocephalus stocks. Gadus macrocephalus larvae hatched asynchronously from egg batches despite incubation under the same environment during their development. Both incubation temperature and temperature-mediated hatch rank affect size and yolk reserve. These data suggest that variations in water temperatures within an ecological range markedly influence the development rates, survival and hatching of the eggs, as well as the stage at hatch larvae of G. macrocephalus. Asynchronous hatching and the production of offspring with variable sizes and yolk reserves are considered evolutionary bet-hedging strategies that enable the species to maximize their likelihood of survival in an environment with variable temperatures. PMID:24344879

  11. Does DNA extraction affect the physical and chemical composition of historical cod (Gadus morhua) otoliths?

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Eg Nielsen, Einar; Hüssy, Karin;

    2010-01-01

    conflicting interests regarding how the limited and irreplaceable otolith collections should be used. To resolve this, it is important to find out whether DNA extraction damages otoliths such that they can no longer be used for other research purposes or whether individual otoliths can be used in multiple...... applications. We examined the effects of three different DNA extraction methods on the elemental composition, the morphology, and the clarity of annual growth increments for successful age estimation of Atlantic cod (Gadus morhua) otoliths that had been archived for 0–31 years. The three extraction methods...... yielded DNA of comparable quality, and none of the methods caused major damage to the otoliths. Of the element concentrations measured, only Mg and Rb showed considerable changes resulting from DNA extraction. The physical properties of the otolith (morphology and clarity of annual growth increments) were...

  12. Conserving marine biodiversity: insights from life-history trait candidate genes in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Hansen, Jakob Hemmer; Therkildsen, Nina Overgaard; Meldrup, Dorte;

    2014-01-01

    Recent technological developments have facilitated an increased focus on identifying genomic regions underlying adaptive trait variation in natural populations, and it has been advocated that this information should be important for designating population units for conservation. In marine fishes......, phenotypic studies have suggested adaptation through divergence of life-history traits among natural populations, but the distribution of adaptive genetic variation in these species is still relatively poorly known. In this study, we extract information about the geographical distribution of genetic...... variation for 33 single nucleotide polymorphisms (SNPs) associated with life-history trait candidate genes, and compare this to variation in 70 putatively neutral SNPs in Atlantic cod (Gadus morhua). We analyse samples covering the major population complexes in the eastern Atlantic and find strong evidence...

  13. Prey exoskeletons influence the course of gastric evacuation in Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Couturier, C. S.; Andersen, N. G.; Audet, C.;

    2013-01-01

    the prey exoskeleton all affected gastric evacuation: duration of initial delay, overall evacuation rate and a decreased evacuation rate at the end of the process. The power exponential function (PEF), with its shape parameter, described the course of evacuation for these prey types well, especially......This study examined the effects of prey exoskeleton characteristics on gastric evacuation patterns in Atlantic cod Gadus morhua. Three distinct stages were highlighted in the gastric evacuation of crustacean prey characterized by a robust exoskeleton. The experiments confirmed that the three shrimp...... the initial delay. The PEF does not, however, allow describing evacuation by the current stomach content mass independent of meal size, which limits its usefulness in estimating consumption rates of wild G. morhua. To predict and describe gastric evacuation of prey with a robust exoskeleton, it is...

  14. Using otolith microstructure to analyse growth of juvenile Baltic cod Gadus morhua

    DEFF Research Database (Denmark)

    Hüssy, Karin; Mosegaard, Henrik; Hinrichsen, H.H.; Böttcher, U.

    2003-01-01

    relationship between fish and otolith size were found to change at settling, with an increase of fish size in relation to otolith size after settling. This change was more pronounced on the slope compared to the top of the bank. The timing of first settling at the 2 localities did not differ with respect to......Pelagic and demersal juvenile Baltic cod Gadus morhua L. were collected on the slope and the top of Rønne bank in the Baltic Sea during 2 cruises in November and December 1998. The growth, age at settling and vertical migration pattern were studied by otolith microstructure analysis. The...... fish age. At both localities, fish that hatched early in the season spent a shorter time in the pelagic stage than late-hatched fish. However, significant differences in growth rate during the pelagic stage were observed, where fish captured on the slope grew faster. On the bank, individuals with fast...

  15. Individual behaviour of Baltic cod (Gadus morhua) in relation to sex and reproductive state

    DEFF Research Database (Denmark)

    Nielsen, Birgitte; Hüssy, Karin; Neuenfeldt, Stefan;

    2013-01-01

    Information from data storage tags (DSTs) is conventionally used to infer movement patterns or reveal characteristics (e.g. temperature or salinity) of the environment surrounding tagged fish. Here we link data derived from DSTs with the reproductive physiology of tagged fish. Individual vertical...... activity of adult male and female Atlantic cod Gadus morhua L. in the Bornholm Basin was derived from DST measures and related to the individual histologically determined reproductive phase. Spawning migrations were identified by movements towards deeper and more saline waters. No difference was observed...... the spawning period differs between sexes, as does the level of activity during spawning events. Not all individuals followed the general pattern; a considerable number of individuals were found to spawn in shallow water in the Arkona Basin, and juvenile fish undertook the migration without spawning...

  16. Using interview-based recall surveys to estimate cod Gadus morhua and eel Anguilla anguilla harvest in Danish recreational fishing

    DEFF Research Database (Denmark)

    Sparrevohn, Claus Reedtz; Storr-Paulsen, Marie

    2012-01-01

    Using interview-based recall surveys to estimate cod Gadus morhua and eel Anguilla anguilla harvest in Danish recreational fishing. – ICES Journal of Marine Science, 69: 323–330.Marine recreational fishing is a popular outdoor activity in Denmark, practised by both anglers and passive gear fishers...... mandatory Danish fishing licence. The second survey was designed to identify those who fish without a licence. It was estimated that 1231 t of cod were harvested in 2009, corresponding to 4.8% of the entire Danish cod yield (recreational harvest + commercial landings). Area differences were found, and, in...... certain areas, the recreational harvest of cod accounted for more than 30% of the total yield. The majority (81%) of the recreational cod harvest was taken by anglers. Eels, however, are almost exclusively caught with passive gear (fykenets) and a total of 104 t year−1 was harvested, which corresponds to...

  17. Polycyclic aromatic compounds in cod (Gadus morhua) from the Northwest Atlantic and St. Lawrence Estuary.

    Science.gov (United States)

    Hellou, J; Upshall, C; Payne, J F; Hodson, P V

    1994-05-01

    There is limited information available on levels of polycyclic aromatic hydrocarbons (PAH) in major fish populations including populations from the Northwest Atlantic. The cod (Gadus morhua) stocks off eastern Canada form the basis of one of the world's most important fisheries. Muscle tissues of cod collected from Northwest Atlantic Fisheries Organisation (NAFO) management Divisions 2J, 3K and 3Ps off Newfoundland and Labrador, as well as three contaminated sites in the Gulf of St. Lawrence were analyzed for total polycyclic aromatic (PAC) by fluorimetry. Concentrations were determined in terms of crude oil and chrysene equivalents in line with recommendations of the International Oceanographic Commission. Overall, relatively low concentrations of PAC were found, the highest values generally being below 0.1 microgram/g (dry weight) in terms of chrysene equivalents. Similarly, only trace levels of a few PAH were detected in composite samples analyzed by gas chromatography-mass spectrometry (GC-MS). It is of interest that the highest levels of PAC were found in fish from NAFO Division 3K, while concentrations in fish from the two contiguous zones, 2J and 3Ps, as well as the Gulf of St. Lawrence, were similar. Division 3K is a major fishing zone and it is important to determine if trawler fleets are important sources of hydrocarbons derived from fossil fuels, in this and similar fishing areas of the world's oceans. PMID:8016631

  18. Catch-Quota Pilot Study on the Dutch commercial fishery on cod (Gadus morhua)(first period: 2010-2012

    OpenAIRE

    Helmond, van, A.T.M.; Couperus, A.S.; Warmerdam, M.J.M.; Tuinen, van, P.

    2012-01-01

    The possibility to operate a catch-quota scheme on Dutch commercial fishing vessels was investigated in a pilot study on the commercial fishery on cod (Gadus Morhua). The project started at the end of 2010 and was fully operational, with five Dutch registered vessels, in 2011. To be able to implement a catch quota management system, monitoring and reporting of the total catches is an essential element. This might be done by using electronic monitoring (EM). The participating vessels received ...

  19. Feeding opportunities of larval and juvenile cod (Gadus morhua) in a Greenlandic fjord: temporal and spatial linkages between cod and their preferred prey

    DEFF Research Database (Denmark)

    Swalethorp, Rasmus; Kjellerup, Sanne; Malanski, Evandro; Munk, Peter; Nielsen, Torkel Gissel

    2014-01-01

    . The present analysis is based on nine cruises each covering 5 stations visited between 24 May and 5 August 2010 comparing zooplankton abundance, cod gut content and distribution patterns. Cod 4–25 mm in length preferred prey of about 5 % of their own length. During ontogeny, their preferences changed......Feeding of fish depends on a spatial and temporal match with prey, and since larval and juvenile feeding can be highly selective, their preferences for given prey sizes and taxa should be considered when quantifying the actual availability of potential prey. We investigated the diet and prey...... preferences of the early-life stages of Atlantic cod (Gadus morhua) to quantify the availability of prey during a spring-summer season in a West Greenlandic fjord. We hypothesized that abundances of larval and juvenile cod at size were synchronized to optimal availability of preferred prey in space and time...

  20. Biomarker candidate discovery in Atlantic cod (Gadus morhua) continuously exposed to North Sea produced water from egg to fry

    DEFF Research Database (Denmark)

    Bohne-Kjersem, Anneli; Bache, Nicolai; Meier, Sonnich;

    2010-01-01

    In this study Atlantic cod (Gadus morhua) were exposed to different levels of North Sea produced water (PW) and 17beta-oestradiol (E(2)), a natural oestrogen, from egg to fry stage (90 days). By comparing changes in protein expression following E(2) exposure to changes induced by PW treatment, we...... changes that may be useful as biomarker candidates of produced water (PW) and oestradiol exposure in Atlantic cod fry. The biomarker candidates discovered in this study may, following validation, prove effective as diagnostic tools in monitoring exposure and effects of discharges from the petroleum...

  1. Stable isotope evidence for late medieval (14th-15th C origins of the eastern Baltic cod (Gadus morhua fishery.

    Directory of Open Access Journals (Sweden)

    David C Orton

    Full Text Available Although recent historical ecology studies have extended quantitative knowledge of eastern Baltic cod (Gadus morhua exploitation back as far as the 16th century, the historical origin of the modern fishery remains obscure. Widespread archaeological evidence for cod consumption around the eastern Baltic littoral emerges around the 13th century, three centuries before systematic documentation, but it is not clear whether this represents (1 development of a substantial eastern Baltic cod fishery, or (2 large-scale importation of preserved cod from elsewhere. To distinguish between these hypotheses we use stable carbon and nitrogen isotope analysis to determine likely catch regions of 74 cod vertebrae and cleithra from 19 Baltic archaeological sites dated from the 8th to the 16th centuries. δ(13C and δ(15N signatures for six possible catch regions were established using a larger sample of archaeological cod cranial bones (n = 249. The data strongly support the second hypothesis, revealing widespread importation of cod during the 13th to 14th centuries, most of it probably from Arctic Norway. By the 15th century, however, eastern Baltic cod dominate within our sample, indicating the development of a substantial late medieval fishery. Potential human impact on cod stocks in the eastern Baltic must thus be taken into account for at least the last 600 years.

  2. Development of a SNP resource and a genetic linkage map for Atlantic cod (Gadus morhua

    Directory of Open Access Journals (Sweden)

    Higgins Brent

    2010-03-01

    Full Text Available Abstract Background Atlantic cod (Gadus morhua is a species with increasing economic significance for the aquaculture industry. The genetic improvement of cod will play a critical role in achieving successful large-scale aquaculture. While many microsatellite markers have been developed in cod, the number of single nucleotide polymorphisms (SNPs is currently limited. Here we report the identification of SNPs from sequence data generated by a large-scale expressed sequence tag (EST program, focusing on fish originating from Canadian waters. Results A total of 97976 ESTs were assembled to generate 13448 contigs. We detected 4753 SNPs that met our selection criteria (depth of coverage ≥ 4 reads; minor allele frequency > 25%. 3072 SNPs were selected for testing. The percentage of successful assays was 75%, with 2291 SNPs amplifying correctly. Of these, 607 (26% SNPs were monomorphic for all populations tested. In total, 64 (4% of SNPs are likely to represent duplicated genes or highly similar members of gene families, rather than alternative alleles of the same gene, since they showed a high frequency of heterozygosity. The remaining polymorphic SNPs (1620 were categorised as validated SNPs. The mean minor allele frequency of the validated loci was 0.258 (± 0.141. Of the 1514 contigs from which validated SNPs were selected, 31% have a significant blast hit. For the SNPs predicted to occur in coding regions (141, we determined that 36% (51 are non-synonymous. Many loci (1033 SNPs; 64% are polymorphic in all populations tested. However a small number of SNPs (184 that are polymorphic in the Western Atlantic were monomorphic in fish tested from three European populations. A preliminary linkage map has been constructed with 23 major linkage groups and 924 mapped SNPs. Conclusions These SNPs represent powerful tools to accelerate the genetic improvement of cod aquaculture. They have been used to build a genetic linkage map that can be applied to

  3. Unraveling the evolution of the Atlantic cod's (Gadus morhua L. alternative immune strategy.

    Directory of Open Access Journals (Sweden)

    Martin Malmstrøm

    Full Text Available Genes encoding the major histocompatibility complex (MHC have been thought to play a vital role in the adaptive immune system in all vertebrates. The discovery that Atlantic cod (Gadus morhua has lost important components of the MHC II pathway, accompanied by an unusually high number of MHC I genes, shed new light on the evolution and plasticity of the immune system of teleosts as well as in higher vertebrates. The overall aim of this study was to further investigate the highly expanded repertoire of MHC I genes using a cDNA approach to obtain sequence information of both the binding domains and the sorting signaling potential in the cytoplasmic tail. Here we report a novel combination of two endosomal sorting motifs, one tyrosine-based associated with exogenous peptide presentation by cross-presenting MHCI molecules, and one dileucine-based associated with normal MHC II functionality. The two signal motifs were identified in the cytoplasmic tail in a subset of the genes. This indicates that these genes have evolved MHC II-like functionality, allowing a more versatile use of MHC I through cross-presentation. Such an alternative immune strategy may have arisen through adaptive radiation and acquisition of new gene function as a response to changes in the habitat of its ancestral lineage.

  4. Correlations between hemoglobin type and temperature preference of juvenile Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Behrens, Jane W.; Gräns, Albin; Therkildsen, Nina Overgaard;

    2012-01-01

    Atlantic cod (Gadus morhua L.) exhibits polymorphic hemoglobin variants with the HbI locus showing a strong North-South geographic cline in frequency distribution of three main types (1/1, 1/2 and 2/2). This may indicate selective advantages of the different HbI types under various temperature...... regimes. Despite this only one study has directly examined the temperature preference of the two homozygous types, HbI-1/1 and HbI-2/2, whereas the preference of the heterozygote (HbI-1/2) has never previously been addressed. By exposing fish to a 4–19 °C temperature gradient in an annular preference...... chamber we recorded the preferred temperature of wild juvenile G. morhua of all three main Hbl types originating from an area where they co-exist. HbI-2/2 G. morhua preferred significantly cooler water (8.9±0.2 °C) compared to the HbI-1/1 group (11±0.6 °C), this difference, however, not being as distinct...

  5. Evaluating SNP ascertainment bias and its impact on population assignment in Atlantic cod, Gadus morhua.

    Science.gov (United States)

    Bradbury, Ian R; Hubert, Sophie; Higgins, Brent; Bowman, Sharen; Paterson, Ian G; Snelgrove, Paul V R; Morris, Corey J; Gregory, Robert S; Hardie, David C; Borza, Tudor; Bentzen, Paul

    2011-03-01

    The increasing use of single nucleotide polymorphisms (SNPs) in studies of nonmodel organisms accentuates the need to evaluate the influence of ascertainment bias on accurate ecological or evolutionary inference. Using a panel of 1641 expressed sequence tag-derived SNPs developed for northwest Atlantic cod (Gadus morhua), we examined the influence of ascertainment bias and its potential impact on assignment of individuals to populations ranging widely in origin. We hypothesized that reductions in assignment success would be associated with lower diversity in geographical regions outside the location of ascertainment. Individuals were genotyped from 13 locations spanning much of the contemporary range of Atlantic cod. Diversity, measured as average sample heterozygosity and number of polymorphic loci, declined (c. 30%) from the western (H(e) = 0.36) to eastern (H(e) = 0.25) Atlantic, consistent with a signal of ascertainment bias. Assignment success was examined separately for pools of loci representing differing degrees of reductions in diversity. SNPs displaying the largest declines in diversity produced the most accurate assignment in the ascertainment region (c. 83%) and the lowest levels of correct assignment outside the ascertainment region (c. 31%). Interestingly, several isolated locations showed no effect of assignment bias and consistently displayed 100% correct assignment. Contrary to expectations, estimates of accurate assignment range-wide using all loci displayed remarkable similarity despite reductions in diversity. Our results support the use of large SNP panels in assignment studies of high geneflow marine species. However, our evidence of significant reductions in assignment success using some pools of loci suggests that ascertainment bias may influence assignment results and should be evaluated in large-scale assignment studies. PMID:21429176

  6. Development of international fisheries for the eastern Baltic cod ( Gadus morhua ) from the late 1880s until 1938

    DEFF Research Database (Denmark)

    Eero, Margit; MacKenzie, Brian; Karlsdottir, H.M.; Gaumiga, R.

    The paper provides an overview of eastern Baltic cod (Gadus morhua) fisheries from the end of the 1880s until 1938, in order to improve the knowledge of long-term stock dynamics. The data compiled and included in the study comprise catches and economic values of exploited fish species, time series...... of indicators of fishing effort and qualitative information on developments in fishing technology. This information has been assembled for different countries and locations in the Baltic Sea. We first summarize the multi-decadal development of national cod fisheries and their relative importance...... during the first decades of the 20th century. We then assess whether these data can be used to estimate the relative roles of fishing and ecosystem changes on variations in catches. We conclude that the assembled data reveal biologically meaningful variations in the state of the cod stock and that some...

  7. Impact of water-accommodated fractions of crude oil on Atlantic cod, Gadus morhua following chronic exposure

    International Nuclear Information System (INIS)

    This study examined the long-term effects of hydrocarbon exposure on the gonadal development of fish. Mature Atlantic cod (Gadus morhua) were exposed to low concentrations of water accommodated fractions (WAFs) of polycyclic aromatic hydrocarbons (PAHs) in an ambient flowthrough seawater system. Some PAH-exposed cod groups were depurated afterwards for 38 to 287 days. Mortality was rare, and external lesions occurred only in the PAH-exposed groups. The gonado-somatic index revealed that gonadal development was disrupted in both sexes and spawning and spermiation was delayed in the 33 depurated PAH-groups. The findings indicate that chronic exposure to WAFs in the water column may have an adverse effect on reproduction in Atlantic cod.

  8. Accumulation and elimination of methylmercury in Atlantic cod (Gadus morhua L.) following dietary exposure

    International Nuclear Information System (INIS)

    Methylmercury is known to bioaccumulate and biomagnify up the marine food chain. Fish from high levels of the marine food chain may contain relatively high concentrations of mercury, and most (>70%) of the mercury found in muscle is methylmercury. In aquaculture, marine protein (mainly fishmeal) is the dominant source of methylmercury, and this raises some concern with regards to fish welfare and consumer safety. A dietary exposure study, including a depuration period, was carried out in order to study the accumulation and elimination of methylmercury in Atlantic cod (Gadus morhua L.), and to estimate the transfer of methylmercury from feed to fish. Fish were sampled throughout a three month exposure period and a three month depuration period. Muscle samples were fractionated into a protein and a lipid fraction by lipid extraction using methanol and chloroform. Mercury and methylmercury were determined by inductively coupled plasma mass spectrometry (ICPMS) and gas chromatography-inductively coupled plasma mass spectrometry (GC-ICPMS), respectively. A continuous accumulation of methylmercury, after a lag period of 10 days, was observed in muscle tissue during the three months exposure to methylmercury (0.95+/-0.03μg Hg/g feed, n=6). After three months, the final concentration in muscle was 0.38+/-0.04μg Hg/gww (n=6), where methylmercury constituted 90-95% of the mercury present. The elimination of methylmercury from muscle was slow and incomplete (within the three months of depuration) with an estimated elimination half-life (t1/2) of 377 days. The transfer of methylmercury from feed to Atlantic cod, described by the estimated absorption efficiency, was 38%. In muscle more than 99% of the mercury was found in the protein fraction. These results suggest that Atlantic cod readily takes up dietary methylmercury, which is efficiently accumulated into muscle, where it is incorporated into larger peptides or proteins. Comparable results were found for Atlantic salmon

  9. Reconstructing historical stock development of Atlantic cod (Gadus morhua) in the eastern Baltic Sea before the beginning of intensive exploitation

    DEFF Research Database (Denmark)

    Eero, Margit; Köster, Fritz; MacKenzie, Brian

    2008-01-01

    The landings of Atlantic cod (Gadus morhua) in the eastern Baltic Sea in the early decades of the 20th century were below 50 thousand tonnes and therefore lower than in recent years at very low stock size. These low landings have largely contributed to a perception that the stock size was also low...... mortality before the 1940s was below 0.2, but reached moderate levels during the Second World War. The stock size before the war may be considered as a reference level of biomass at low fishing impact, providing important information for the management of fisheries and the Baltic ecosystem....

  10. Plasma FITC-dextran exchange between the primary and secondary circulatory systems in the Atlantic cod, Gadus Morhua

    DEFF Research Database (Denmark)

    Fischer, Claes; Steffensen, John Fleng

    2008-01-01

    Fluorescein isothiocyanate dextran (FITC-dextran) exchange between the primary (PCS) and secondary (SCS) circulatory systems in the Atlantic cod, Gadus morhua (Linnaeus, 1752), were studied using 20-kDa (n = 4) and 500-kDa (n = 4) FITC-dextran. In order to give a qualitative perspective of the...... injected 500-kDa FITC-dextran was also examined, and it was observed that of the 500-kDa FITC-dextran lost from the primary and secondary vascular systems, 63.0 +/- 9.2% could be recovered from the liver....

  11. Purification and characterisation of trypsin-like enzyme from the pyloric caeca of cod (Gadus morhua) II

    OpenAIRE

    Luiz Henrique Beirão; Ian Mckintoch Mackie; Evanilda Teixeira; César Damian

    2001-01-01

    A trypsin -like enzyme from the pyloric caeca of cod (Gadus morhua) was purified by affinity chromatography on CHOM Sepharose 4B. Some characteristics were established by its catalytic activity on T.A.M.E., typical enzyme substrate, and serine protease inhibitors. The enzyme had an isoelectric point of 5.30 and 5.89 and was very similar in amino acid composition to bovine trypsin, but differed in having a higher relative amount of acidic amino acids and a lower amount of basic amino acids. Th...

  12. Characterization of Francisella sp., GM2212, the first Francisella isolate from marine fish, Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Ottem, Karl F; Nylund, Are; Karlsbakk, Egil;

    2007-01-01

    A Francisella sp., isolate GM2212(T), previously isolated from diseased farmed Atlantic cod Gadus morhua in Norway is characterized. The complete 16S rDNA, 16S-23S intergenic spacer, 23S rDNA, 23S-5S intergenic spacer, 5S rDNA, FopA, lipoprotein TUL4 (LpnA), malate dehydrogenase and a hypothetica......; but is susceptible to ceftazidime, tetracycline, gentamicin, ciprofloxacin. Based on the molecular and phenotypical characteristics, we suggest that this GM2212 isolate, may represent a new species of Francisella. Isolate GM2212(T) (=CNCM I-3481(T) = CNCM I-3511(T) = DSM 18777(T))....

  13. Cloning and expression analysis of interferon regulatory factor 7 in the Pacific cod, Gadus macrocephalus.

    Science.gov (United States)

    Sun, Hang; Jiang, Zhiqiang; Mao, Mingguang; Huo, Yuan; Han, Yuzhe; Zhang, Saisai

    2016-02-01

    Interferon regulatory factor 7 (IRF7) plays an important role in regulating the response of type I interferon (IFN) to viral infection. To understand the mechanisms underlying immune reactions in the Pacific cod, Gadus macrocephalus, the gene encoding G. macrocephalus IRF7 was cloned and characterized. The cDNA of G. macrocephalus IRF7 was also cloned and sequenced. A cDNA sequence of 2032 bp was assembled using polymerase chain reaction (PCR) products. It contains an open reading frame of 1323 bp in length, which encoded a 440-amino acid polypeptide that comprised a DNA-binding domain (DBD), an IRF association domain (IAD), and a serine-rich domain (SRD). In the DBD, the tryptophan cluster consisted of only four tryptophans, which is a unique characteristic in fish IRF7. The mRNA of IRF7 was detected in various tissues, including in the spleen, thymus, kidney, intestine, and gills, using relative quantification PCR (R-qPCR). Dynamic expression of IRF7 was observed in larvae throughout post-hatching (ph) development, with the highest level detected at day of ph (dph) 25. Response to immune stimulation was examined by challenging larvae with polyriboinosinic polyribocytidylic acid (pIC) to mimic viral infection and elicit an immune reaction. R-qPCR revealed that the expression of IRF7 significantly increased in pIC-treated groups relative to that in the control groups, in a time-dependent manner, with peak responses at 48 and 72 h after pIC-treatment. These results show that IRF7 is expressed in various tissues of adult fish and larvae and is sensitive to viral infection, suggesting that it plays a role in antiviral immune defense in G. macrocephalus. PMID:26702560

  14. Temperature Modulates the Effects of Ocean Acidification on Intestinal Ion Transport in Atlantic Cod, Gadus morhua

    Science.gov (United States)

    Hu, Marian Y.; Michael, Katharina; Kreiss, Cornelia M.; Stumpp, Meike; Dupont, Sam; Tseng, Yung-Che; Lucassen, Magnus

    2016-01-01

    CO2-driven seawater acidification has been demonstrated to enhance intestinal bicarbonate secretion rates in teleosts, leading to an increased release of CaCO3 under simulated ocean acidification scenarios. In this study, we investigated if increasing CO2 levels stimulate the intestinal acid–base regulatory machinery of Atlantic cod (Gadus morhua) and whether temperatures at the upper limit of thermal tolerance stimulate or counteract ion regulatory capacities. Juvenile G. morhua were acclimated for 4 weeks to three CO2 levels (550, 1200, and 2200 μatm) covering present and near-future natural variability, at optimum (10°C) and summer maximum temperature (18°C), respectively. Immunohistochemical analyses revealed the subcellular localization of ion transporters, including Na+/K+-ATPase (NKA), Na+/H+-exchanger 3 (NHE3), Na+/HCO3− cotransporter (NBC1), pendrin-like Cl−/HCO3− exchanger (SLC26a6), V-type H+-ATPase subunit a (VHA), and Cl− channel 3 (CLC3) in epithelial cells of the anterior intestine. At 10°C, proteins and mRNA were generally up-regulated for most transporters in the intestinal epithelium after acclimation to higher CO2 levels. This supports recent findings demonstrating increased intestinal HCO3− secretion rates in response to CO2 induced seawater acidification. At 18°C, mRNA expression and protein concentrations of most ion transporters remained unchanged or were even decreased, suggesting thermal compensation. This response may be energetically favorable to retain blood HCO3− levels to stabilize pHe, but may negatively affect intestinal salt and water resorption of marine teleosts in future oceans. PMID:27313538

  15. Temperature modulates the effects of ocean acidification on intestinal ion transport in Atlantic cod, Gadus morhua

    Directory of Open Access Journals (Sweden)

    Marian Yong-An Hu

    2016-06-01

    Full Text Available CO2-driven seawater acidification has been demonstrated to enhance intestinal bicarbonate secretion rates in teleosts, leading to an increased release of CaCO3 under simulated ocean acidification scenarios. In this study, we investigated if increasing CO2 levels stimulate the intestinal acid–base regulatory machinery of Atlantic cod (Gadus morhua and whether temperatures at the upper limit of thermal tolerance stimulate or counteract ion regulatory capacities. Juvenile G. morhua were acclimated for four weeks to three CO2 levels (550, 1,200 and 2,200 μatm covering present and near-future natural variability, at optimum (10°C and summer maximum temperature (18°C, respectively. Immunohistochemical analyses revealed the subcellular localization of ion transporters, including Na+/K+-ATPase (NKA, Na+/H+-exchanger 3 (NHE3, Na+/HCO3- cotransporter (NBC1, pendrin-like Cl-/HCO3- exchanger (SLC26a6, V-type H+-ATPase subunit a (VHA and Cl- channel 3 (CLC3 in epithelial cells of the anterior intestine. At 10°C, proteins and mRNA were generally up-regulated for most transporters in the intestinal epithelium after acclimation to higher CO2 levels. This supports recent findings demonstrating increased intestinal HCO3- secretion rates in response to CO2 induced seawater acidification. At 18°C, mRNA expression and protein concentrations of most ion transporters remained unchanged or were even decreased, suggesting thermal compensation. This response may be energetically favorable to retain blood HCO3- levels to stabilize pHe, but may negatively affect intestinal salt and water resorption of marine teleosts in future oceans.

  16. Heavy metals in Pacific cod (Gadus macrocephalus) from the Aleutians: location, age, size, and risk.

    Science.gov (United States)

    Burger, Joanna; Gochfeld, Michael; Shukla, Tara; Jeitner, Christian; Burke, Sean; Donio, Mark; Shukla, Sheila; Snigaroff, Ronald; Snigaroff, Daniel; Stamm, Timothy; Volz, Conrad

    2007-11-01

    Considerable attention has been devoted to the risks from mercury (Hg) and polychlorinated biphenyls (PCB) to high-level predators (including humans) who consume freshwater fish. Although the U.S. Food and Drug Administration (FDA) issued advisories because of Hg for four marine fish species, there are few data on lead (Pb), cadmium (Cd), or other metals in Bering Sea fish generally, or on the risk these levels pose to the fish themselves or to consumers of marine fish. Levels of arsenic (As), Cd, chromium (Cr), Pb, Hg, and selenium (Se) levels were examined in muscle and liver of 142 Pacific Cod (Gadus macrocephalus) collected in 2004 at Nikolski, Adak, Amchitka, and Kiska Islands in the Aleutian Chain (Alaska) in the Bering Sea/North Pacific Ocean, a major source of commercial fishing. One key objective was whether there were location, age, gender, and size effects on tissue concentration that might pose a risk to the fish or their predators (including humans). All fish were measured and weighed, and a subset was aged by examining otolith layers. As was higher in liver than in muscle (geometric mean 2420 versus 1590 ng/g or ppb wet weight), as were Cd (GM 224 versus 1.92) and Se (GM 1380 versus 165). Conversely, Cr was higher in muscle (76.8 versus 45 ppb), as were Pb (23.7 vs 12 ppb) and surprisingly Hg (128 versus 82 ppb). Adak, until recently a large military base, had the highest levels of As, Hg, and Se, while Amchitka had the highest Pb levels, but Nikolski, which generally had the lowest levels, had relatively high Pb in liver. In general, interisland differences were significant for most metals in muscle, but only for Cr in liver. Weight and length were positively related to age, but age tended to explain more of the variance in metal levels. The multiple regression relationships differed by tissue in an unanticipated manner. Location contributed significantly to the models for muscle Cd, Pb, Hg, and Se, but not for liver levels. Conversely the length by

  17. Effects of dietary fatty acids on the production and quality of eggs and larvae of Atlantic cod (Gadus morhua L.)

    DEFF Research Database (Denmark)

    Røjbek, Maria; Støttrup, Josianne; Jacobsen, Charlotte;

    2014-01-01

    end of spawning. Lipid composition and egg and larval quality of 34 family crosses were investigated. Results indicated that ARA uptake into eggs from broodstock diet was highly efficient achieving proportions of ARA up to 84% higher in eggs than in the diet. EPA was 42–76% higher, and DHA was 155......Cultivated Atlantic cod (Gadus morhua) entering their first year of gamete maturation were fed diets with different levels of arachidonic acid (ARA) and eicosapentaenoic acid (EPA) for 6.5 months prior to commencement of spawning. Gravid females were stripped three times: at the beginning, peak and......–173% higher in eggs than in diets. Cod fed the diet with the lowest EPA/ARA ratio had the greatest egg production. Eggs from fish on a diet with high ARA level had significantly higher fertilization and hatching success than those fed low levels of ARA. This diet produced on average 71 viable eggs g 1 female...

  18. An estrogen-responsive plasma protein expression signature in Atlantic cod (Gadus morhua) revealed by SELDI-TOF MS

    DEFF Research Database (Denmark)

    Nielsen, Mari Mæland; Meyer, Sonnich; Larsen, Bodil Katrine; Andersen, Odd Ketil; Hjelle, Anne

    2011-01-01

    Compound-specific protein expression signatures( PESs) can be revealed by proteomic techniques. The SELDI-TOF MS approach is advantageous due to its simplicity and high-throughput capacity,however, there are concerns regarding the reproducibility of this method. The aim of this study was to define...... an estrogen-responsive PES in plasma of Atlantic cod (Gadus morhua) using the SELDI-TOF MS technique. Protein expression analysis of male cod exposed to 17 b-estradiol (E2) showed that 27 plasma peaks were differentially expressed following exposure.There producibility of this result was evaluated by...... targeted antibody-assisted SELDI-TOF MS approach was carried out in an attempt to identify the E2-responsive peaks. Results indicated that 2 peaks were fragments of the well-known biomarkers VTG and/or ZRP. In this study, the SELDI-TOF MS technology has shown its potential for defining compound...

  19. Proteome changes in Atlantic cod (Gadus morhua) exposed to oil and produced water: Discovery of biomarker candidates for environmental monitoring

    Energy Technology Data Exchange (ETDEWEB)

    Kjersem, Anneli B

    2007-07-15

    Proteomics were applied to identify changes in the proteome of Atlantic cod (Gadus morhua) exposed to crude North Sea oil and North Sea produced water at different life stages and during early development. Apparent protein changes were identified and linked to possible signalling pathways and mechanisms involved in the biological response of fish following exposure. Exposure to North Sea crude oil and produced water appeared to induce a large number of changes, also at low levels of exposure. More than 40 of the 137 protein changes detected in plasma of juvenile cod following exposed to crude oil and surrogate produced water appeared at the lowest level of exposure, 0.06 ppm crude oil. Almost all of the protein changes detected in whole fry and fry liver following produced water exposure occurred at the lowest levels of produced water, 0.01% and 0.1% produced water

  20. Variations in the drift of larval cod ( Gadus morhua L.) in the Baltic Sea : combining field observations and modelling

    DEFF Research Database (Denmark)

    Voss, R.; Hinrichsen, H.H.; St. John, Michael

    1999-01-01

    Coupled three-dimensional (3-D) physical oceanographic modelling and field sampling programmes were carried out in May 1988 and August 1991 to investigate the potential drift of larval cod (Gadus morhua L.) in the Bornholm Basin of the Baltic Sea. The goals were to predict the transport of cod...... larvae, thus aiding the identification of physical processes influencing larval retention/dispersal. Numerical simulations were performed using a 3-D eddy-resolving baroclinic model based on the Bryan-Cox-Semtner code adapted for the Baltic Sea. Within the Bornholm Basin, the model was initialized with...... ground truth data of physical parameters obtained on the research cruises, and all simulations were forced with actual wind data. Outside the basin, generalized hydrographic features of the Baltic Sea were utilized by incorporation of simulated hydrographic fields from previous model runs typical for the...

  1. Free radical scavenging and angiotensin-I converting enzyme inhibitory peptides from Pacific cod (Gadus macrocephalus) skin gelatin.

    Science.gov (United States)

    Ngo, Dai-Hung; Ryu, Bomi; Vo, Thanh-Sang; Himaya, S W A; Wijesekara, Isuru; Kim, Se-Kwon

    2011-12-01

    Potent antioxidative peptides were purified from Pacific cod (Gadus macrocephalus) skin gelatin using alcalase, neutrase, papain, trypsin, pepsin, and α-chymotrypsin. Among them, the papain hydrolysate exhibited the highest antioxidant activity. Therefore, it was further purified and obtained two peptides with amino acid sequences of Thr-Cys-Ser-Pro (388 Da) and Thr-Gly-Gly-Gly-Asn-Val (485.5 Da). The antioxidant activity of the purified peptides was performed by electron spin resonance technique. Moreover, their intracellular free radical scavenging activity using 2',7'-dichlorofluorescin diacetate and the protective effect against oxidation-induced DNA damage were evaluated in mouse macrophages (RAW 264.7 cells). Furthermore, both peptides have shown potential angiotensin-I converting enzyme inhibitory effect. The present study demonstrated that the peptides derived from Pacific cod (G. macrocephalus) skin gelatin could be used in the food industry as functional ingredients with potent antioxidative and antihypertensive benefits. PMID:21945677

  2. Aminoglycoside antibiotics and the sensory hair cells of inner ear and lateral line system in the Atlantic cod, Gadus morhua: effects on fish hearing threshold

    OpenAIRE

    Faucher, Karine; Aas-Hansen, Øyvind; Damsgard, Borge; Bégout, Marie-Laure; Fuhr, Torgrim; Laukli, Einar; Stenklev, Niels-Christian

    2007-01-01

    The aims of the present study were to investigate: a) the potential involvement of the fish lateral line system in hearing at 250 Hz and b) the possible regeneration of the inner ear hair cells in the Atlantic cod (Gadus morhua). The inner ear and lateral line system of the Atlantic cod were inactivated using ototoxic aminoglycoside antibiotics by injection (gentamicin) or bath (gentamicin and streptomycin), respectively. Hearing thresholds were measured in the fish using the Auditory Brainst...

  3. Differential Survival among Batches of Atlantic Cod (Gadus morhua L. from Fertilisation through to Post-Metamorphosis.

    Directory of Open Access Journals (Sweden)

    Petra E Petersen

    Full Text Available Aquaculture production of cod has decreased from over 20,000 tonnes in 2009 to less than 2,000 tonnes in 2014 and the industry faces many challenges, one of which is high and unpredictably variable mortality rates in the early life stages. Hence, full-cycle farming with hatchery produced juveniles is still considered unprofitable compared to fisheries and on-growing of wild cod. In the present study, potential batch differences in progeny survival of wild-caught, hatchery-spawned Faroe Bank cod (Gadus morhua L. were investigated at two defined periods during early life history; i the embryo stage (60 day degrees post fertilisation and ii the fry stage (110 days post hatch, post metamorphosis. The fry stage experiment was conducted in three replicates (N = 300 per replicate, and a panel of three polymorphic microsatellite markers was used for parental analysis. Mean survival rate at the embryo stage was 69% (± 20% SD. Survival was positively associated with egg diameter (P < 0.01, explaining 90% of the variation in egg survival rates. The data were too scarce to conclude either way concerning a possible correlation between survival rates between the two periods (P < 0.10. Offspring from three batches (from a total of eight dominated in the fry stage, contributing over 90% of the progeny, and results were consistent over all three replicate tanks. The skewed batch representation observed may be of relevance to the effective management of selective breeding programmes for cod.

  4. Residency, site fidelity and habitat use of Atlantic cod (Gadus morhua) at an offshore wind farm using acoustic telemetry.

    Science.gov (United States)

    Reubens, Jan T; Pasotti, Francesca; Degraer, Steven; Vincx, Magda

    2013-09-01

    Because offshore wind energy development is fast growing in Europe it is important to investigate the changes in the marine environment and how these may influence local biodiversity and ecosystem functioning. One of the species affected by these ecosystem changes is Atlantic cod (Gadus morhua), a heavily exploited, commercially important fish species. In this research we investigated the residency, site fidelity and habitat use of Atlantic cod on a temporal scale at windmill artificial reefs in the Belgian part of the North Sea. Acoustic telemetry was used and the Vemco VR2W position system was deployed to quantify the movement behaviour. In total, 22 Atlantic cod were tagged and monitored for up to one year. Many fish were present near the artificial reefs during summer and autumn, and demonstrated strong residency and high individual detection rates. When present within the study area, Atlantic cod also showed distinct habitat selectivity. We identified aggregation near the artificial hard substrates of the wind turbines. In addition, a clear seasonal pattern in presence was observed. The high number of fish present in summer and autumn alternated with a period of very low densities during the winter period. PMID:23937893

  5. The influence of feeding behaviour on growth of Atlantic cod (Gadus morhua, Linnaeus, 1758) in the North Sea

    DEFF Research Database (Denmark)

    Hüssy, Karin; Andersen, Niels Gerner; Pedersen, Eva Maria

    2016-01-01

    The objective of this study was to resolve key mechanisms driving individual growth patterns of Atlantic cod (Gadus morhua). Growth dynamics were analysed by linking growth patterns with stomach content composition and environmental temperature. Samples were collected in August/September of the...... years 2009, 2010 and 2011 in the north-eastern part of the central North Sea. Prey selection was assessed by identification of individual prey items in the stomach content to species. Ten feeding groups were identified consisting of individuals with one prey type dominating their stomach contents (≥75...... opportunistic in their prey selection, but at the same time indicated that the total, broad feeding niche width of the population is dominated by individual diet specialization and that many individuals temporally show a preference for a particular prey type. The contribution of invertebrates and particularly...

  6. Genomic signatures of local directional selection in a high gene flow marine organism, the Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Hansen, Jakob Hemmer; Poulsen, Nina Aagaard; Loeschske, Volker; Moen, Thomas; Johansen, Torild; Mittelholzer, Christian; Taranger, Geir-Lasse; Ogden, Rob; Carvalho, Gary R.

    2009-01-01

    -associated single nucleotide polymorphisms (SNPs) for evidence of selection in local populations of Atlantic cod (Gadus morhua L.) across the species distribution. Results: Our global genome scan analysis identified eight outlier gene loci with very high statistical support, likely to be subject to directional...... and complex, i.e. outlier loci were generally not only associated with one of a few divergent local populations. Even on a limited geographical scale between the proximate North Sea and Baltic Sea populations four loci displayed evidence of adaptive evolution. Temporal genome scan analysis applied to...... DNA from archived otoliths from a Faeroese population demonstrated stability of the intra-population variation over 24 years. An exploratory landscape genetic analysis was used to elucidate potential effects of the most likely environmental factors responsible for the signatures of local adaptation...

  7. Low impact of exposure to environmentally relevant doses of 226Ra in Atlantic cod (Gadus morhua) embryonic cells

    International Nuclear Information System (INIS)

    The aim of this study was to investigate whether 226Ra, a radionuclide present in produced water from oil platforms in the North Sea and other offshore drilling areas, could affect vulnerable early life stages of Atlantic cod (Gadus morhua). Blastula-stage embryonic cells (EC) from fertilized eggs of Atlantic cod were isolated and exposed to environmental relevant concentrations of 226Ra and transcription of selected genes quantified. The results showed a weak, but significant up-regulation of GPx3 and HSP70 transcripts after 48 h of exposure to 2.11 Bq/L. In EC exposed to three 226Ra concentrations (2.11, 23 and 117 Bq/L) for 12 h, metallothionein, HSP90AA, thioredoxin and caspase 8 were significantly up-regulated in cells exposed to 117 Bq/L, whereas thioredoxin was also significantly up-regulated in EC exposed to 23 Bq/L. When EC were exposed to the same 226Ra concentrations for 48 h, only heme oxygenase was significantly up-regulated in the 23 Bq/L exposure group. The results suggest that environmentally relevant activities of 226Ra may induce oxidative stress and apoptosis in fish ECs. Exposure of Atlantic cod EC to Cd, selected as a model toxicant, supported the ability of EC around blastula stage to respond to toxicants by altered transcription. Due to dilution, environmentally relevant concentrations of radionuclides present in produced water would be expected to pose a minor threat to early life stages of fish. - Highlights: ► 226Ra affects the transcription of genes in Atlantic cod embryonic cells. ► 226Ra may induce oxidative stress and apoptosis in fish embryonic cells. ► 226Ra not expected to pose a major threat to early life stages of marine fish.

  8. Effects of chilled storage and cryopreservation on sperm characteristics, antioxidant enzyme activities, and lipid peroxidation in Pacific cod Gadus microcephalus

    Science.gov (United States)

    Wang, Xueying; Shi, Xuehui; Liu, Yifan; Yu, Daode; Guan, Shuguang; Liu, Qinghua; Li, Jun

    2016-07-01

    The present study evaluated the effects of chilled storage and cryopreservation on sperm motion characteristics, antioxidant enzyme activities, and lipid peroxidation in the Pacific cod Gadus macrocephalus. Sperm motility and the activities of superoxide dismutase (SOD), catalase (CAT), glutathione peroxidase (GPx), glutathione reductase (Gr), and lipid peroxidation (measured via malondialdehyde (MDA) content) were determined after the milt was stored at 4°C for 12 h, cryopreserved without cryoprotectant in 12% propylene glycol (PG), cryopreserved in 12% PG+0.1 mol/L trehalose, or cryopreserved in 12% PG spermatozoa but centrifuged to decant the supernatant prior to cryopreservation (only sperm cells were cryopreserved). After chilled storage or cryopreservation, the SOD, CAT and GPx activities were reduced in sperm cells and increased in seminal plasma in almost all treatments; sperm motility parameters were also decreased. However, the addition of trehalose into the cryoprotectant could significantly improve the postthaw sperm quality as revealed by the sperm average path velocity. This improvement might be attributed to the function of trehalose in scavenging reactive oxygen species. Chilled storage and cryopreservation had significant effects on sperm motion characteristics, antioxidant enzyme activities, and lipid peroxidation in the Pacific cod.

  9. Single and mixture effects of aquatic micropollutants studied in precision-cut liver slices of Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Bizarro, Cristina; Eide, Marta; Hitchcock, Daniel J; Goksøyr, Anders; Ortiz-Zarragoitia, Maren

    2016-08-01

    The low concentrations of most contaminants in the aquatic environment individually may not affect the normal function of the organisms on their own. However, when combined, complex mixtures may provoke unexpected effects even at low amounts. Selected aquatic micropollutants such as chlorpyrifos, bis-(2-ethylhexyl)-phthalate (DEHP), perfluorooctanoic acid (PFOA) and 17α-ethinylestradiol (EE2) were tested singly and in mixtures at nM to μM concentrations using precision-cut liver slices (PCLS) of Atlantic cod (Gadus morhua). Fish liver is a target organ for contaminants due to its crucial role in detoxification processes. In order to understand the effects on distinct key liver metabolic pathways, transcription levels of various genes were measured, including cyp1a1 and cyp3a, involved in the metabolism of organic compounds, including toxic ones, and the catabolism of bile acids and steroid hormones; cyp7a1, fabp and hmg-CoA, involved in lipid and cholesterol homeostasis; cyp24a1, involved in vitamin D metabolism; and vtg, a key gene in xenoestrogenic response. Only EE2 had significant effects on gene expression in cod liver slices when exposed singly at the concentrations tested. However, when exposed in combinations, effects not detected in single exposure conditions arose, suggesting complex interactions between studied pollutants that could not be predicted from the results of individual exposure scenarios. Thus, the present work highlights the importance of assessing mixtures when describing the toxic effects of micropollutants to fish liver metabolism. PMID:27388235

  10. Prediction of larval viability based on egg quality parameters and early cleavage patterns in the experiments of triploidy induction in Atlantic cod, Gadus morhua L.

    OpenAIRE

    Rani, Manira Sultana

    2005-01-01

    Abnormal blastomere morphology may be indicative of low egg viability in fish and therefore represent a useful tool for rapid qualitative assessments for commercial and experimental aquaculture purposes. This work reviews the literature on this subject, and compares early cleavage patterns in a series of preliminary experiments of triploidy induction in Atlantic cod, Gadus morhua. Data from 4 different egg batches showed that cleavage abnormalities were generally higher in cold...

  11. Prediction of selectivity from morphological conditions: Methodology and a case study on cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Herrmann, Bent; Krag, Ludvig Ahm; Frandsen, Rikke;

    2009-01-01

    The FISHSELECT methodology. tools, and software were developed and used to measure the morphological parameters that determine the ability of cod to penetrate different mesh types, sizes, and openings. The shape of one cross-section at the cod's head was found to explain 97.6% of the mesh penetra......-haul and the between-haul variations previously reported from sea trials. Finally, based on the results obtained, ideas to improve the size selection of cod in towed gear are presented....

  12. Potential bias in estimates of abundance and distribution of North Sea cod (Gadus morhua) due to strong winds prevailing prior or during a survey

    DEFF Research Database (Denmark)

    Wieland, Kai; Olesen, Hans Jakob; Pedersen, Eva Maria;

    2011-01-01

    The impact of strong winds on catches of cod (Gadus morhua) was studied using different fishing methods during small-scale surveys with commercial fishing vessels in the north-eastern central North Sea. Catch per unit effort of a flyshooter and a trawler were considerably lower in the shallower...... survey had significant effects on the catch rates in particular for the trawler. These results supports fishermen's opinion that strong winds may cause an underestimation of biomass of cod in shallow waters and a bias in the resulting spatial distribution derived from bottom trawl surveys....

  13. Spatiotemporal distribution and composition of mixed stock fishery of Atlantic cod (Gadus morhua) in West Greenlandic waters based on retrospective genetic analysis

    DEFF Research Database (Denmark)

    Bonanomi, Sara; Therkildsen, Nina Overgaard; Hedeholm, Rasmus Berg; Retzel, Anja; Eg Nielsen, Einar

    Historical samples of fish are a unique source of DNA to investigate the temporal dynamics of fish population structure and distribution over time. During the last century Atlantic cod (Gadus morhua) stocks have declined dramatically in Greenlandic Waters. Recent genetic investigations have...... identified the presence of four genetically distinct spawning groups in the area. We used SNP (Single Nucleotide Polymorphism) analysis of DNA from archived historical cod otoliths (1946-2011) to conduct a retrospective spatiotemporal genetic analysis. The aim was to detect historical changes in the...

  14. Integrating the markers Pan I and haemoglobin with the genetic linkage map of Atlantic cod (Gadus morhua

    Directory of Open Access Journals (Sweden)

    Simpson Gary

    2010-10-01

    Full Text Available Abstract Background Haemoglobin (Hb and pantophysin (Pan I markers have been used intensively in population studies of Atlantic cod (Gadus morhua and in the analysis of traits such as temperature tolerance, growth characteristics and sexual maturation. We used an Illumina GoldenGate panel and the KASPar SNP genotyping system to analyse SNPs in three Atlantic cod families, one of which was polymorphic at the Hb β1 locus, and to generate a genetic linkage map integrating Pan I and multiple Hb loci. Findings Data generated allowed the mapping of nine Hb loci, the Pan I locus, and other 122 SNPs onto an existing linkage genetic map for Atlantic cod. Four Hb genes (i.e. α1, α4, β1 and β5 have been mapped on linkage group (LG 2 while the other five (i.e. α2, α3, β2, β3 and β4 were placed on LG18. Pan I was mapped on LG 1 using a newly developed KASPar assay for a SNP variable only in Pan IA allelic variants. The new linkage genetic map presented here comprises 1046 SNPs distributed between 23 linkage groups, with a length of 1145.6 cM. A map produced by forcing additional loci, resulting in a reduced goodness-of-fit for mapped markers, allowed the mapping of a total of 1300 SNPs. Finally, we compared our genetic linkage map data with the genetic linkage map data produced by a different group and identified 29 shared SNPs distributed on 10 different linkage groups. Conclusions The genetic linkage map presented here incorporates the marker Pan I, together with multiple Hb loci, and integrates genetic linkage data produced by two different research groups. This represents a useful resource to further explore if Pan I and Hbs or other genes underlie quantitative trait loci (QTL for temperature sensitivity/tolerance or other phenotypes.

  15. Distribution and drift of Atlantic cod ( Gadus morhua ) eggs and larvae in Greenland offshore waters

    DEFF Research Database (Denmark)

    Wieland, Kai; Hovgård, Holger

    2002-01-01

    recruitment of the West Greenland cod stock. It is also shown that cod eggs and larvae occasionally drift from Southwest Iceland across the Denmark Strait to the East Greenland shelf from where a subsequent transport and immigration of juveniles to West Greenland waters can occur. Larval transport across the...

  16. Automatic feeding and Harvesting of Juvenile Atlantic Cod (Gadus Morhua L. in a Pond

    Directory of Open Access Journals (Sweden)

    V. Øiestad

    1987-01-01

    Full Text Available Large scale production of juvenile Atlantic cod has been carried out since 1980 in a saltwater pond. A break-through was obtained in 1983 with high survival rates of cod larvae to metamorphosis. In 1985 we made progress in two fiels, reduced cannibalism and automatic harvesting. Juvenile cod formed large schools while fed dry pellets in the currents set up by five propellers. An underwater loudspeaker was programmed to give sound pulses just before feeding. During harvesting dry pellets were released inside a fish trap while giving the sound signals the cod juveniles were conditioned to. The cod readily entered the trap and a computer-controlled fish pump transported the fish from the fish trap into a storing tank and grading grids. The trap gradually emptied the pond of fish and more than 80

  17. Hydroacoustic ex situ target strength measurements on juvenile cod ( Gadus morhua L.)

    DEFF Research Database (Denmark)

    Nielsen, J. Rasmus; Lundgren, Bo

    1999-01-01

    Most TS-measurements on fish have been carried out for 38 kHz, and the existing TS algorithm for 120 kHz on cod is based on measurements on stunned fish. The main objective of these experiments was to establish an empirical estimate of the relation between acoustic reflection (target strength, TS...... relationship is compared to other TS measurements on juvenile cod in literature. TS at 120 kHz for the investigated cod size range seems to decrease faster by length than the 20 logL relation used for larger cod. The results were used to check the expected range limits of TS for juvenile cod during survey, and......) and length of live juvenile cod (7-10 cm and 15-20 cm) at 120 kHz. This was done by recording the variation in TS of freely swimming cod tracking single fish targets for the two size groups within the acoustic beam held. The experiment was set up in an open air 2000 m(3) tank where the small 5-10 cm...

  18. Amino acid sequence of the cold-active alkaline phosphatase from Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Asgeirsson, Bjarni; Nielsen, Berit Noesgaard; Højrup, Peter

    2003-01-01

    Atlantic cod is a marine fish that lives at low temperatures of 0-10 degrees C and contains a cold-adapted alkaline phosphatase (AP). Preparations of AP from either the lower part of the intestines or the pyloric caeca area were subjected to proteolytic digestion, mass spectrometry and amino acid...... sequencing by Edman degradation. The primary structure exhibits greatest similarity to human tissue non-specific AP (80%), and approximately 30% similarity to AP from Escherichia coli. The key residues required for catalysis are conserved in the cod AP, except for the third metal binding site, where cod AP...

  19. Evaluation of Electrical Stunning of Atlantic Cod (Gadus morhua) and Turbot (Psetta maxima) in Seawater

    OpenAIRE

    Lambooij, E.; Digre, H.; Erikson, U.; Reimert, H.G.M.; Burggraaf, D.; Vis, van de, J.W.

    2013-01-01

    The aim of this study was to assess electrical stunning of Atlantic cod and turbot in seawater to develop a protocol for the process of stunning and killing. An induced general epileptiform insult (unconscious) had a duration of 40 ± 27 s (n =14) in cod (2.6 ± 0.5 kg) and 34 ± 18 s (n = 19) in turbot (520 ± 65 g). Seven cod and 3 turbot displayed a physical reaction, and 11 turbot registered an electroencephalogram (EEG) response to pain stimuli administered 30 s post-stun. The heart rate was...

  20. Investigation of fixed wavelength fluorescence results for biliary metabolites of polycyclic aromatic hydrocarbons formed in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Pampanin, Daniela M; Kemppainen, Eeva K; Skogland, Karianne; Jørgensen, Kåre B; Sydnes, Magne O

    2016-02-01

    Fixed wavelength fluorescence (FF) and synchronous fluorescence scanning (SFS) of fish bile are commonly used methods to analyze for exposure to polycyclic aromatic hydrocarbons (PAHs) from petrogenic and pyrogenic sources. A range of conjugated oxidation products from petrogenic PAHs are normally accumulated in the bile. Therefore their detection is important. In the present study, phenanthrene and naphthalene metabolites, formed in vivo in Atlantic cod (Gadus morhua), were used to study the response of these compounds in both FF and SFS analyses. The selected synthetic metabolites were (-)-(1R,2R)-1,2-dihydrophenanthrene-1,2-diol and (-)-(1R,2R)-1,2-dihydronaphthalene-1,2-diol. The study findings showed that the recommended excitation and emission wavelengths for FF analysis do not comprise the maximum emission wavelengths for these metabolites, providing an incorrect estimation of the PAH exposure. A method developed in our laboratory for the synthesis of (-)-(1R,2R)-1,2-dihydrophenanthrene-1,2-diol is also described. PMID:26492423

  1. Fertilisation and hatching success of Atlantic cod (Gadus morhua) eggs when exposed to various concentrations of produced water

    International Nuclear Information System (INIS)

    This study investigated the fertilization and hatching success of Atlantic cod (Gadus morhua) eggs that were exposed to various dilutions of produced water from a natural gas production platform. A control group of eggs was fertilized in sea water without any produced water. Another set of eggs were fertilized in sea water with 4 different concentrations of produced water and held their respective concentrations for 24 hours to evaluate the success of the fertilization. Viable fertilized eggs were transferred to 96 well plates containing fresh sea water and incubated in the dark at approximately 6 degrees C until hatch. Eggs began hatching about 14 days after fertilization (DPF), peaked at about 17 DPF, then finished hatching by 21 DPF. Analysis of PAH content in the diluted produced water showed that at 0.32 percent, 1.08 percent and 3.6 percent concentrations, the fertilization success was greater than or equal to that of the control group. However, for the 12 percent concentration, there were no viable fertilized eggs present after the 24 hour period. Survivability of eggs during sea water incubation was similar for the 0 percent, 0.32 percent and 1.08 percent treatment groups, but egg mortality increased for the 3.60 percent concentration group, to about 61.5 percent mean cumulative mortality at 6 DPF, then remained constant. The mean hatching success for all dilutions was presented.

  2. Growth of juvenile Atlantic cod Gadus morhua in land-based recirculation systems: Effects of feeding regime, photoperiod and diet

    DEFF Research Database (Denmark)

    Fülberth, Michael; Moran, Damian; Jarlbæk, Henrik;

    2009-01-01

    feeding duration. In each RAS unit three diets (A, B and C) were tested, which were broadly similar in composition but from different manufacturers. Water exchange rate averaged 10–19% in the three recirculation systems, and key water quality parameters such as NH4+ and CO2 remained at low effect......The combined effect of feeding regime and photoperiod on the growth of juvenile Atlantic cod Gadus morhua in land-based recirculating aquaculture systems (RAS) was examined using three different commercial diets. Fish of 8–10 g were reared in 1 m3 tanks at an initial density of 10 kg m− 3 for 78 d...... concentrations (<0.4 and <3 mg L− 1, respectively). Final stocking densities were 45–60 kg m− 3. There was a significant influence of both feed/photoperiod regime and diet on specific growth rate (SGR). Fish receiving the LD12:11 and LD6:6 regimes and Diet A grew best (SGR 2.59 and 2.54% d− 1 respectively). Fish...

  3. Evaluation of chemical markers for age validation of western Baltic cod (Gadus morhua otoliths

    Directory of Open Access Journals (Sweden)

    Sven Stötera

    2015-11-01

    Baltic cod were intraperitoneally injected with the different chemicals and kept for 47 days in netpens. The lowest mortality and best ring formation was observed at 100mg/kg cod wet weight compared to 50 and 25mg/kg wet weight (TET only. Preliminary analysis suggests that the simultaneous injection of TET and STR decreases the visibility of TET-rings. This is probably due to a binding interaction between both markers in the body of the fish, so that less TET is bound in the otolith. The use of tetracycline hydrochloride in the concentrations of 50 mg/kg and 100 mg/kg fish were considered the most appropriate to mark Baltic cod for age validation in large-scale mark-recapture experiments. TET and STR should not be injected together.

  4. Fishing gear-induced skin ulcerations in Baltic cod, Gadus morhua L

    DEFF Research Database (Denmark)

    Mellergaard, Stig; Bagge, O.

    1998-01-01

    In 1982 a high prevalence of skin ulcerations was observed in Baltic cod in the vicinity of the Danish island of Bornholm. In March the prevalence varied from G to 13%, and in May it had increased to between 26 and 48%. The ulcerations had a sequential development. The initial stage appeared as s...... escaping from the nets, combined with bilateral occurrence of the ulcers, strongly indicates that the skin ulcers were induced by the fishing gear. Features of the pathology could be linked to the temporary retention of cod in trawl meshes....

  5. Effects of handling stress and storage conditions on quality of farmed cod (Gadus morhua)

    OpenAIRE

    Tran, Minh Phu

    2010-01-01

    Atlantic cod is a promising species for fish farming in Norway. In order to maintain a high fish quality and achieve higher fish quality, it is necessary toincrease the understanding of pre and post mortem biochemical processes in fish.The effects of pre slaughter handling stress on fish quality have been observed in many studies. Stress and storage temperature had effect on the color and texture of pre rigor filleted farmed cod. The main objectives of this study were to determine effects of ...

  6. Degradation of ATP and glycogen in cod ( Gadus morhua ) muscle during freezing

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Jessen, Flemming

    2001-01-01

    Changes in ATP, IMP, lactate and glycogen contents in the muscle of cod were followed during freezing at temperatures of -20C and -45C. ATP degradation was accompanied by a corresponding increase in IMP content. Simultaneous measurement of temperature showed that at both freezing rates, the...... greatest decrease in ATP content was observed when the temperature reached -0.8C. Glycolysis occurred during freezing of cod as indicated by an increase in lactate content. The changes found in all measured metabolites were more pronounced when freezing was performed at a slow rate compared to a fast rate...

  7. Development and experimental validation of a 20K Atlantic cod (Gadus morhua) oligonucleotide microarray based on a collection of over 150,000 ESTs.

    Science.gov (United States)

    Booman, Marije; Borza, Tudor; Feng, Charles Y; Hori, Tiago S; Higgins, Brent; Culf, Adrian; Léger, Daniel; Chute, Ian C; Belkaid, Anissa; Rise, Marlies; Gamperl, A Kurt; Hubert, Sophie; Kimball, Jennifer; Ouellette, Rodney J; Johnson, Stewart C; Bowman, Sharen; Rise, Matthew L

    2011-08-01

    The collapse of Atlantic cod (Gadus morhua) wild populations strongly impacted the Atlantic cod fishery and led to the development of cod aquaculture. In order to improve aquaculture and broodstock quality, we need to gain knowledge of genes and pathways involved in Atlantic cod responses to pathogens and other stressors. The Atlantic Cod Genomics and Broodstock Development Project has generated over 150,000 expressed sequence tags from 42 cDNA libraries representing various tissues, developmental stages, and stimuli. We used this resource to develop an Atlantic cod oligonucleotide microarray containing 20,000 unique probes. Selection of sequences from the full range of cDNA libraries enables application of the microarray for a broad spectrum of Atlantic cod functional genomics studies. We included sequences that were highly abundant in suppression subtractive hybridization (SSH) libraries, which were enriched for transcripts responsive to pathogens or other stressors. These sequences represent genes that potentially play an important role in stress and/or immune responses, making the microarray particularly useful for studies of Atlantic cod gene expression responses to immune stimuli and other stressors. To demonstrate its value, we used the microarray to analyze the Atlantic cod spleen response to stimulation with formalin-killed, atypical Aeromonas salmonicida, resulting in a gene expression profile that indicates a strong innate immune response. These results were further validated by quantitative PCR analysis and comparison to results from previous analysis of an SSH library. This study shows that the Atlantic cod 20K oligonucleotide microarray is a valuable new tool for Atlantic cod functional genomics research. PMID:21127932

  8. Foraging behavior of larval cod ( Gadus morhua ) influenced by prey density and hunger

    DEFF Research Database (Denmark)

    Munk, Peter

    1995-01-01

    decreased their prey size selectivity. Behavioural response was to a large degree determined by the level of hunger, represented by the number of newly ingested prey in the gut. The findings show that cod larvae have a flexible response to changes in feeding conditions and imply that larvae can grow and...

  9. Stage-specific mortality of Baltic cod ( Gadus morhua L.) eggs

    DEFF Research Database (Denmark)

    Wieland, Kai; Hinrichsen, H.H.; Grønkjær, P.

    2000-01-01

    A study on cod egg mortality was carried out in the Bornholm Basin (southern central Baltic Sea) toward the end of July 1996. An initial egg aggregation marked by a satellite-tracked drifter buoy was sampled repeatedly over an Ii-day period; profiles of temperature, salinity and dissolved oxygen...

  10. Simulations on the prediction of cod (Gadus morhua) freshness from an intelligent packaging sensor concept

    NARCIS (Netherlands)

    Heising, J.K.; Boekel, van M.A.J.S.; Dekker, M.

    2015-01-01

    A non-destructive method that monitors changes in the freshness status of packed cod fillets has potential for the development of an intelligent packaging concept. The method is based on monitoring volatile compounds that dissolve and dissociate in the sensing aqueous phase. A mathematical model was

  11. Fishing gear-induced skin ulcerations in Baltic cod, Gadus morhua L

    DEFF Research Database (Denmark)

    Mellergaard, Stig; Bagge, O.

    1998-01-01

    In 1982 a high prevalence of skin ulcerations was observed in Baltic cod in the vicinity of the Danish island of Bornholm. In March the prevalence varied from G to 13%, and in May it had increased to between 26 and 48%. The ulcerations had a sequential development. The initial stage appeared as...... severe skin abrasions in the area from the pectoral fin posterior to the level of the anus. The skin abrasions developed into large spots of necrotic dermal tissue with a diameter of 2-5 cm. The central part of the necrotic area sloughed off exposing a large haemorrhagic ulcer. Characteristically most of...... the ulcerations on the trunk occurred bilaterally. A common histopathological finding was coagulation necrosis of the muscular tissue. The ulcerated fish were mainly 24-28 cm in length. P, correlation between high concentrations of cod around Bornholm, high fishing activity in the area, length of fish...

  12. Stock recruitment relationships for cod ( Gadus morhua L.) in the central Baltic Sea incorporating environmental variability

    DEFF Research Database (Denmark)

    Jarre, Astrid; Wieland, Kai; MacKenzie, Brian; Hinrichsen, H.H.; Plikshs, M.; Aro, E.

    2000-01-01

    investigations on recruitment, which were continued through a partial recovery of the stock in the mid-1990s. The principal factors influencing recruitment and recognized at present are: (i) the volume of water with temperature, oxygen and salinity conditions which meet the minimum requirements for successful...... egg development ('reproductive volume'); (ii) the age-structure of the spawning stock; (iii) the timing of spawning; and (iv) predation mortality on eggs due to sprat (Sprattus sprattus) and herring (Clupea harengus), as well as cod cannibalism. We relate recruitment at age 2 to parent stock size...... using updated time series of these variables, comprising the period 1966 to 1994. Spawning stock biomass and egg production are compared as measures of parent stock size. The influence of wind energy and zooplankton abundance on cod recruitment are discussed. A modified Ricker model is outlined...

  13. Male reproductive competition in spawning aggregations of cod ( Gadus morhua , L.)

    DEFF Research Database (Denmark)

    Bekkevold, Dorte; Hansen, Michael Møller; Loeschcke, V.

    2002-01-01

    Reproductive competition may lead to a large skew in reproductive success among individuals. Very few studies have analysed the paternity contribution of individual males in spawning aggregations of fish species with huge census population sizes. We quantified the variance in male reproductive...... success in spawning aggregations of cod under experimental conditions over an entire spawning season. Male reproductive success was estimated by microsatellite-based parentage analysis of offspring produced in six separate groups of spawning cod. In total, 1340 offspring and 102 spawnings distributed...... across a spawning season were analysed. Our results show that multiple males contributed sperm to most spawnings but that paternity frequencies were highly skewed among males, with larger males on average siring higher proportions of offspring. It was further indicated that male reproductive success was...

  14. Why is age determination of Baltic cod (Gadus morhua) so difficult?

    DEFF Research Database (Denmark)

    Hüssy, Karin

    2010-01-01

    consistent pattern the following year, and overlap was not influenced by sex or fish size. The results suggest that otolith opacity in Baltic cod is not associated with seasonal patterns in daily increment structure and that traditional age determination based on otolith opacity yields highly uncertain......The aim of this study was to evaluate the consistency of three methods for assigning annuli in adult Baltic cod otoliths. The methods examined were (i) daily increment patterns, (ii) opacity profiles, and (iii) traditional age reading. Frequency distributions of the distance from the nucleus to the...... similar to opacity patterns. However, within individual fish, the co-occurrence of overlap between the two patterns was random. In cases where there was overlap, translucent zone formation started just before the disappearance of visible increments. Overlap in 1 year did not necessarily lead to a...

  15. An Integrated Approach to Gene Discovery and Marker Development in Atlantic Cod (Gadus morhua)

    OpenAIRE

    Bowman, Sharen; Hubert, Sophie; Higgins, Brent; Stone, Cynthia; Kimball, Jennifer; Borza, Tudor; Bussey, Jillian Tarrant; Simpson, Gary; Kozera, Catherine; Curtis, Bruce A.; Hall, Jennifer R.; Hori, Tiago S.; Feng, Charles Y.; Rise, Marlies; Booman, Marije

    2010-01-01

    Atlantic cod is a species that has been overexploited by the capture fishery. Programs to domesticate this species are underway in several countries, including Canada, to provide an alternative route for production. Selective breeding programs have been successfully applied in the domestication of other species, with genomics-based approaches used to augment conventional methods of animal production in recent years. Genomics tools, such as gene sequences and sets of variable markers, also hav...

  16. Synthesis and degradation of adenosine triphosphate in cod ( Gadus morhua ) at subzero temperatures

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Nielsen, Jette; Jessen, Flemming

    1999-01-01

    This study has demonstrated that the extraction step is very important when analysing ATP and its degradation products. An important factor is whether the sample is fresh, frozen or thawed when homogenised since thawing of the sample will lead to rapid loss of ATP. During frozen storage it was...... degrees C. Furthermore, it was found that in whole cod ATP could be synthesised at a significant rate at -7 degrees C. (C) 1999 Society of Chemical Industry....

  17. An integrated approach to gene discovery and marker development in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Bowman, Sharen; Hubert, Sophie; Higgins, Brent; Stone, Cynthia; Kimball, Jennifer; Borza, Tudor; Bussey, Jillian Tarrant; Simpson, Gary; Kozera, Catherine; Curtis, Bruce A; Hall, Jennifer R; Hori, Tiago S; Feng, Charles Y; Rise, Marlies; Booman, Marije; Gamperl, A Kurt; Trippel, Edward; Symonds, Jane; Johnson, Stewart C; Rise, Matthew L

    2011-04-01

    Atlantic cod is a species that has been overexploited by the capture fishery. Programs to domesticate this species are underway in several countries, including Canada, to provide an alternative route for production. Selective breeding programs have been successfully applied in the domestication of other species, with genomics-based approaches used to augment conventional methods of animal production in recent years. Genomics tools, such as gene sequences and sets of variable markers, also have the potential to enhance and accelerate selective breeding programs in aquaculture, and to provide better monitoring tools to ensure that wild cod populations are well managed. We describe the generation of significant genomics resources for Atlantic cod through an integrated genomics/selective breeding approach. These include 158,877 expressed sequence tags (ESTs), a set of annotated putative transcripts and several thousand single nucleotide polymorphism markers that were developed from, and have been shown to be highly variable in, fish enrolled in two selective breeding programs. Our EST collection was generated from various tissues and life cycle stages. In some cases, tissues from which libraries were generated were isolated from fish exposed to stressors, including elevated temperature, or antigen stimulation (bacterial and viral) to enrich for transcripts that are involved in these response pathways. The genomics resources described here support the developing aquaculture industry, enabling the application of molecular markers within selective breeding programs. Marker sets should also find widespread application in fisheries management. PMID:20396923

  18. Hydroacoustic ex situ target strength measurements on juvenile cod ( Gadus morhua L.)

    DEFF Research Database (Denmark)

    Nielsen, J. Rasmus; Lundgren, Bo

    1999-01-01

    Most TS-measurements on fish have been carried out for 38 kHz, and the existing TS algorithm for 120 kHz on cod is based on measurements on stunned fish. The main objective of these experiments was to establish an empirical estimate of the relation between acoustic reflection (target strength, TS......) and length of live juvenile cod (7-10 cm and 15-20 cm) at 120 kHz. This was done by recording the variation in TS of freely swimming cod tracking single fish targets for the two size groups within the acoustic beam held. The experiment was set up in an open air 2000 m(3) tank where the small 5-10 cm...... long fish were swimming freely during measurement in cages (1 x 1 x 3 m) within the acoustic beam under natural conditions in seawater with a salinity of 30 and a temperature of 11 degrees C. An EY500 split-beam acoustic system was used to detect single fish passing through the acoustic beam field...

  19. Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua

    Directory of Open Access Journals (Sweden)

    Mittelholzer Christian

    2009-12-01

    Full Text Available Abstract Background Marine fishes have been shown to display low levels of genetic structuring and associated high levels of gene flow, suggesting shallow evolutionary trajectories and, possibly, limited or lacking adaptive divergence among local populations. We investigated variation in 98 gene-associated single nucleotide polymorphisms (SNPs for evidence of selection in local populations of Atlantic cod (Gadus morhua L. across the species distribution. Results Our global genome scan analysis identified eight outlier gene loci with very high statistical support, likely to be subject to directional selection in local demes, or closely linked to loci under selection. Likewise, on a regional south/north transect of central and eastern Atlantic populations, seven loci displayed strongly elevated levels of genetic differentiation. Selection patterns among populations appeared to be relatively widespread and complex, i.e. outlier loci were generally not only associated with one of a few divergent local populations. Even on a limited geographical scale between the proximate North Sea and Baltic Sea populations four loci displayed evidence of adaptive evolution. Temporal genome scan analysis applied to DNA from archived otoliths from a Faeroese population demonstrated stability of the intra-population variation over 24 years. An exploratory landscape genetic analysis was used to elucidate potential effects of the most likely environmental factors responsible for the signatures of local adaptation. We found that genetic variation at several of the outlier loci was better correlated with temperature and/or salinity conditions at spawning grounds at spawning time than with geographic distance per se. Conclusion These findings illustrate that adaptive population divergence may indeed be prevalent despite seemingly high levels of gene flow, as found in most marine fishes. Thus, results have important implications for our understanding of the interplay of

  20. Chemical surface disinfection of eggs of Baltic cod, Gadus morhua L

    DEFF Research Database (Denmark)

    Overton, J L; Bruun, Morten Sichlau; Dalsgaard, Inger

    2010-01-01

    . Effective disinfection was also recorded using 100 mg L−1 Actomar K30. Egg batch effect rather than initial bacterial concentration, disinfectant type or incubation method determined the survival of the eggs to hatching and survival of larvae. Because of the carcinogenic effect of glutaraldehyde, iodophor......-fertilization. Bactericidal effect of disinfection, survival to hatching, hatching success and larval abnormalities were assessed. Larval survival was recorded at 5-, 10- and 15-days post-hatch (dph). Although Baltic cod eggs have an unusually thin chorion, they could tolerate surface disinfection. A reduction in bacterial...

  1. The effect of carbon dioxide on growth of juvenile Atlantic cod Gadus morhua L

    DEFF Research Database (Denmark)

    Moran, Damian; Støttrup, Josianne

    2011-01-01

    substantially reduced with increasing CO2 dosage. The size-specific growth trajectories of fish reared under the medium and high CO2 treatments were approximately 2.5 and 7.5 times lower (respectively) than that of fish in the low treatment. Size variance and mortality rate was not significantly different...... experiments using marine fish species. The test concentrations were recalculated from the reported carbonate chemistry conditions, and indicated that the CO2 concentration effect threshold may have been overestimated in two of these studies. Our study suggests that juvenile Atlantic cod are more susceptible...

  2. Glycolysis and ATP degradation in cod ( Gadus morhua ) at subzero temperatures in relation to thaw rigor

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Jessen, Flemming

    2001-01-01

    Glycolysis was shown to occur during freezing of cod of decrease in glycogen and an increase in lactate. In addition, the ATP content decreased during freezing. Synthesis of ATP was measured as degradation of glycogen. During storage at -9 and - 12 degreesC it was found that degradation of ATP was...... faster than synthesis of ATP. This was leading to presence of glycogen even at low ATP concentrations. The ATP and glycogen degradation rates and lactate formation rate reached an optimum (both in small samples as well as in whole fish) when stored at -9 degreesC compared to -12 degreesC. Evidence of ATP...

  3. Effect of produced water on feeding and metabolism of Atlantic cod (Gadus morhua)

    International Nuclear Information System (INIS)

    This paper addressed concerns regarding potentially detrimental cumulative effects of waste products from oil industry activities on marine organisms around production sites. The metabolic capacities, feeding and digestive physiology of fish have been shown to change with environmental parameters, which could impact the growth and health status of fish populations. In this study, the effects of produced water (PW) on feeding and metabolism of Atlantic cod was investigated by exposing fish to 0.100 ppm (x 10,000 PW dilution) or 200 ppm (x 500 dilution) of PW for 76 days. Throughout the experiment, food intake and mean weight were monitored. In addition, serum lipids, metabolites and gene expression of a brain appetite regulating factor were measured at the end of the experiment. No significant differences were observed in weight gain or food intake between the 3 groups of fish. Serum metabolites and neuropeptide Y expression remained unchanged between groups. The study is ongoing to complete comparative measurements of whole blood fatty acid profiles in plasma. The preliminary results indicate that feeding and metabolism in cod is not affected by produced water

  4. Correlation between microbiota and growth in Mangrove Killifish (Kryptolebias marmoratus) and Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Forberg, Torunn; Sjulstad, Eli Bjørnø; Bakke, Ingrid; Olsen, Yngvar; Hagiwara, Atsushi; Sakakura, Yoshitaka; Vadstein, Olav

    2016-01-01

    The vertebrate gut is host to large communities of bacteria, and one of the beneficial contributions of this commensal gut microbiota is the increased nutritional gain from feed components that the host cannot degrade on its own. Fish larvae of similar age and under the same rearing conditions often diverge with regards to growth. The underlying reasons for this could be differences in genetic background, feeding behavior or digestive capacity. Both feeding behavior and digestion can be influenced by differences in the microbiota. To investigate possible correlations between the size of fish larvae and their gut microbiota, we analyzed the microbiota small and large genetically homogenous killifish and genetically heterogeneous cod larvae by Bray-Curtis Similarity measures of 16S DNA DGGE patterns. A significant difference in richness (p = 0.037) was observed in the gut microbiota of small and large killifish, but the overall gut microbiota was not found to be significantly different (p = 0.13), indicating strong genetic host selection on microbiota composition at the time of sampling. The microbiota of small and large cod larvae was significantly different with regards to evenness and diversity (p = 0.0001), and a strong correlation between microbiota and growth was observed. PMID:26875510

  5. Stage-specific mortality of Baltic cod ( Gadus morhua L.) eggs

    DEFF Research Database (Denmark)

    Wieland, Kai; Hinrichsen, H.H.; Grønkjær, P.

    2000-01-01

    A study on cod egg mortality was carried out in the Bornholm Basin (southern central Baltic Sea) toward the end of July 1996. An initial egg aggregation marked by a satellite-tracked drifter buoy was sampled repeatedly over an Ii-day period; profiles of temperature, salinity and dissolved oxygen...... were concurrently recorded. Three replicate estimates of mortality were obtained for each pair of subsequent developmental stages from newly spawned eggs to early larvae. A consistent pattern of stage-specific mortality coincided well with previous experimental observations. Average daily mortality...... rates were 7.2% (eggs IA/IB), 38.7% (eggs (IB/II), 25.6% (eggs II/III), 40.0% (eggs III/IV), and 42.3% (eggs IV/early larvae). The cumulative mortality until hatch amounted to 99.9%. Results from hydrodynamic modelling, however, indicated that the drifter's trajectory was influenced by wind stress...

  6. Using data storage tags to link otolith macrostructure in Baltic cod Gadus morhua with environmental conditions

    DEFF Research Database (Denmark)

    Hüssy, Karin; Nielsen, Birgitte; Mosegaard, Henrik; Worsøe Clausen, Lotte

    2009-01-01

    We examined otolith opacity of Baltic cod in relation to environmental conditions in order to evaluate the formation mechanisms of seasonal patterns used in age determination. Adult fish were tagged with data storage tags (DSTs) and a permanent mark was induced in the otoliths by injection of a...... strontium chloride solution. Based on environmental conditions experienced, fish were classified into different behavioural types: non-reproducing 'non-spawner', and 'spawner' undertaking spawning migrations. Otolith opacity, an indicator of otolith and fish somatic growth and condition, was examined in...... expected-but in non-spawning fish only. In spawners, the general trend was a decrease in opacity from pre- to post spawning. A significant - but positive - temperature effect was only found in the pre-spawning period. The negative effects during and following spawning were not significant. In spawners...

  7. Effect of catch location, season and quality on value of Icelandic cod (Gadus morhua) products

    DEFF Research Database (Denmark)

    Margeirsson, Sveinn; Nielsen, Allan Aasbjerg; Jonsson, Gudmundur R.;

    2006-01-01

    In this book, scientists from various disciplines address the advances in seafood research with respect to quality, safety, consumer's demands and processing of wild and farmed fish. The nutritional properties of marine lipids and lipid oxidation from model systems to seafood are presented. Several...... contributions on the effects of natural anti-oxidants to prevent oxidation are also included. Effects of dietary factors on muscle tissue quality, pre-rigor processing and brining of farmed cod are covered. The development of rigor mortis and the quality of muscle in relation to commercial and experimental....... Attention is paid to the development of the Quality Index Method for the evaluation of the quality of fresh fish and products. The characterisation and the quality of processed by-products are also presented. The presence of trace elements and organic contaminants in variety of seafood products is...

  8. Antioxidant activity of cod (Gadus morhua) protein hydrolysates: Fractionation and characterisation of peptide fractions

    DEFF Research Database (Denmark)

    Farvin Habebullah, Sabeena; Andersen, Lisa Lystbæk; Otte, Jeanette;

    2016-01-01

    This study aimed to characterise peptide fractions (>5 kDa, 3–5 kDa and <3 kDa) with antioxidative activity obtained from a cod protein hydrolysate. The free amino acids in all fractions were dominated by Ala, Gly, Glu and Ser. The total amino acid composition had high proportions of Lys, Ala and...... Glu. The 3–5 kDa and <3 kDa fractions were further fractionated by size exclusion chromatography. All sub-fractions showed high Fe2+ chelating activity. The DPPH radical-scavenging activity of the 3–5 kDa fraction was exerted mainly by one sub-fraction dominated by peptides with masses below 600 Da....... The DPPH radical-scavenging activity of the <3 kDa fraction was exerted by sub-fractions with low molecular weight. The highest reducing power was found in a sub-fraction containing peptides rich in Arg, Tyr and Phe. Both free amino acids and low molecular weight peptides thus seemed to contribute to...

  9. Photoperiod-modulated testis maturation in Atlantic cod (Gadus morhua, L.).

    Science.gov (United States)

    Almeida, Fernanda F L; Taranger, Geir Lasse; Norberg, Birgitta; Karlsen, Orjan; Bogerd, Jan; Schulz, Rüdiger W

    2009-04-01

    Precocious male puberty is a significant problem in Atlantic cod aquaculture. While photoperiod manipulation can inhibit testis growth, a detailed analysis of effects on spermatogenesis is missing. Starting July 1, 2004, prepubertal fish were exposed to different photoperiod regimens in indoor tanks for 17 mo. Testis histology, germ cell dynamics (proliferation and apoptosis), and plasma androgen levels were analyzed. In the natural light (NL) group, testis growth started in September 2004 and was completed in February 2005, when a 2-mo spawning period started. In the constant light (LL) group, none or very few spermatogenic cysts were recruited into spermatogenesis, and apoptotic germ cell loss was high. A change of photoperiod from NL to LL at winter solstice (December 21, 2004) resulted in premature (2 mo) completion of the reproductive cycle, while changing from LL to NL at winter solstice triggered faster than normal testis development. Plasma testosterone levels increased in the NL group from spermatogonial proliferation toward meiosis, while those of 11-ketotestosterone increased toward spermiogenesis and spermiation. Plasma androgen levels did not rise under LL conditions. Comparing fish with developing testes from all groups indicated that low androgen levels were associated with a high incidence of spermatogonial apoptosis; we also found that androgen receptor mRNA expression was most prominent in Sertoli cells in contact with growing spermatogonial clones. Our data show that an inhibitory photoperiod (LL) reduced or blocked differentiation of spermatogonia, increased apoptosis (particularly among proliferating spermatogonia), and was associated with reduced androgen levels, a situation possibly reflecting insufficient gonadotropic stimulation. PMID:19038862

  10. Interactive effects of incubation temperature and salinity on the early life stages of pacific cod Gadus macrocephalus

    Science.gov (United States)

    Bian, Xiaodong; Zhang, Xiumei; Sakurai, Yasunari; Jin, Xianshi; Wan, Ruijing; Gao, Tianxiang; Yamamoto, Jun

    2016-02-01

    The combined effects of incubation temperature and salinity on the early life stages of Pacific cod Gadus macrocephalus were examined under controlled laboratory conditions. Data were collected from two synchronized experiments. Experiment 1 was designed to evaluate the interactive effects of incubation temperature and salinity on the hatchability of fertilized G. macrocephalus eggs. Experiment 2 was set up to evaluate the interactive effects of incubation temperature and salinity on the time from hatching to 50% mortality of the non-fed yolk-sac larvae (M50). The results show that temperature could significantly influence the development and hatchability of the larvae, as well as the hatching characteristics of G. macrocephalus. Viable hatch was significantly influenced by salinity when the upper and lower thermal limits were approached and shows the synergism of low salinity on egg development at low-temperatures and conversely inhibitory effects of low-salinity at high-temperatures. Data on developmental rates as influenced by temperature were presented at each tested salinity level. No influence of salinity was found at the temperature levels tested. Dome-shaped quadratic curves were fitted to the relationship between temperature and the incidence of larval size and yolk storage at hatch for most of the tested salinity levels. The effect of salinity across all temperatures, however, had a much smaller influence on larval size and no effect on yolk storage at hatch. The influence of temperature on larval duration (time from hatching to M50) could be described in all cases by an exponential power function. Evidence on the synergism of low salinity at low-temperatures and conversely inhibitory effects of low-salinity at high-temperatures was also observed. The results were discussed in reference to salinity modified temperature effects on the early life stages of G. macrocephalus. Maximum hatchability and larval size at hatch, and moderate salinity tolerance and

  11. Accumulation of polychlorinated biphenyls from contaminated sediment by Atlantic cod (Gadus morhua): direct accumulation from resuspended sediment and dietary accumulation via the polychaete Nereis virens.

    Science.gov (United States)

    Ruus, Anders; Daae, Ingrid Aarre; Hylland, Ketil

    2012-11-01

    Bioaccumulation of sediment-associated polychlorinated biphenyls (PCBs) was examined in Atlantic cod (Gadus morhua) through direct diffusion from the sediment (via the water phase) and through the food chain (dietary exposure). To facilitate direct accumulation from the sediment, it was continuously resuspended. To study the dietary bioaccumulation of PCBs, cod were fed benthic polychaetes (Nereis virens) previously exposed to test sediments, which were naturally polluted sediments from the inner Oslofjord (Norway). Both exposure experiments had a duration of 129 d. Furthermore, the role of sediments as a source of PCBs accumulated in Oslofjord cod was elucidated, using results from environmental monitoring as a reference. Generally, the results suggest that the contaminated sediments of the inner Oslofjord are an important source of legacy PCBs for accumulation in resident cod, although additional contributions may also be important. Crude estimates of assimilation efficiency of ingested PCBs (through diet) were found to be 30 to 50%; the highest was for the lower chlorinated congeners (PCB-28 and -52). Challenges for applying trophic magnification factors for determining biomagnification in laboratory experiments, in terms of preventive environmental safety, are indicated. The results provide useful information for parameterization of models describing the behavior of hydrophobic persistent contaminants in the foodweb of the Oslofjord and elsewhere. PMID:22865726

  12. Effect of replacement of fish oil with camelina (Camelina sativa) oil on growth, lipid class and fatty acid composition of farmed juvenile Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Hixson, Stefanie M; Parrish, Christopher C; Anderson, Derek M

    2013-12-01

    Camelina (Camelina sativa) oil was tested as a replacement for fish oil in diets for farmed Atlantic cod (Gadus morhua). Camelina differs from other plant oilseeds previously used in aquaculture with high lipid (40 %), α-linolenic acid (40 %), antioxidants and low proportions of saturated fats. Dietary treatments were fed to cod (19 g fish⁻¹ initial weight) for 9 weeks and included a fish oil control (FO), 40 % (CO40) and 80 % (CO80) replacement of fish oil with camelina oil. There was no effect of replacing fish oil with camelina oil included at levels up to 80 % on the growth performance. Cod fed CO80 stored more lipid in the liver (p CO40 > CO80; p Camelina oil can reduce the amount of fish oil needed to meet lipid requirements, although replacing 80 % of fish oil reduced LC PUFAs in both tissues. A comparison of BF₃ and H₂SO₄ as catalysts to transmethylate cod liver and muscle lipids revealed small but significant differences in some fatty acid proportions. PMID:23584924

  13. An investigation of appetite-related peptide transcript expression in Atlantic cod (Gadus morhua) brain following a Camelina sativa meal-supplemented feeding trial.

    Science.gov (United States)

    Tuziak, Sarah M; Rise, Matthew L; Volkoff, Hélène

    2014-10-25

    Camelina sativa is a hardy oilseed crop with seeds that contain high levels of ω3 polyunsaturated fatty acids and protein, which are critical components of fish feed. Camelina might thus be used as a cheaper and more sustainable supplement to fish-based products in aquaculture. Atlantic cod, Gadus morhua, is a species of interest in the aquaculture industry due to a decrease in wild populations and subsequent collapse of some cod fisheries. As cod are carnivorous fish, it is necessary to determine how this species physiologically tolerates plant-based diets. In this study, juvenile Atlantic cod were subjected to 13 weeks of either 15 or 30% camelina meal (CM)-supplemented diets or a control fish meal feed. Growth and food intake were evaluated and the mRNA expression of appetite-related hormones [pro-melanin-concentrating hormone (pmch), hypocretin (synonym: orexin, hcrt), neuropeptide Y (npy) and cocaine- and amphetamine-regulated transcript (cart)] was assessed using quantitative real-time PCR in brain regions related to food intake regulation (telencephalon/preoptic area, optic tectum/thalamus and hypothalamus). CM inclusion diets caused decreases in both growth and food intake in Atlantic cod. Optic tectum pmch transcript expression was significantly higher in fish fed the 30% CM diet compared to fish fed the 15% CM diet. In the hypothalamus, compared to fish fed the control diet, hcrt expression was significantly higher in fish fed the 30% CM diet, while npy transcript expression was significantly higher in fish fed the 15% CM diet. cart mRNA expression was not affected by diet in any brain region. Further studies are needed to determine which factors (e.g. anti-nutritional factors, palatability and nutritional deficits) contribute to reduced feed intake and growth, as well as the maximum CM inclusion level that does not negatively influence feed intake, growth rate and the transcript expression of appetite-related factors in Atlantic cod. PMID:25151310

  14. Micro geographical population structure of cod Gadus morhua in the North Sea and west of Scotland: the role of sampling loci and individuals

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Wright, Peter John; Hansen, Jakob Hemmer;

    2009-01-01

    We investigated potential microgeographical population structure among spatial and temporal samples of cod Gadus morhua L., collected in the northern North Sea and around Scotland, using microsatellite genetic markers. Results were highly dependent on the samples and microsatellite loci included...... clear isolation of 2 samples collected at Viking and pairwise grouping of temporal adult samples from the same location. On a northeast Atlantic regional scale, inferences on local populations and patterns of population structuring were more robust to the inclusion of the microsatellite under selection....... However, while loci subject to selection may provide biased results in relation to identifying populations based on an evolutionary paradigm, they may prove valuable for separating populations on ecological time scales...

  15. Combination of genetics and spatial modelling highlights the sensitivity of cod (Gadus morhua) population diversity in the North Sea to distributions of fishing

    DEFF Research Database (Denmark)

    Heath, Michael R.; Culling, Mark A.; Crozier, Walter W.;

    2014-01-01

    Conserving genetic diversity in animal populations is important for sustaining their ability to respond to environmental change. However, the “between-population” component of genetic diversity (biocomplexity) is threatened in many exploited populations, particularly marine fish, where harvest...... management regions may be larger than the spatial extent of genetically distinct subpopulations. Using single-nucleotide polymorphism data, we delineated the geographic limits of three population units of Atlantic cod (Gadus morhua) in northwest European waters. Two of the populations cohabit the North Sea......, and trawl survey data showed differing trends in their abundances. We developed a spatial model of these units to simulate population dynamics under spatial patterns of harvesting. Competition between units during the pelagic juvenile stages in the model led to suppression of the more localized...

  16. Cortisol levels and expression of stress- and apoptotic-related genes in the embryos of Atlantic cod, Gadus morhua following exposure to air

    DEFF Research Database (Denmark)

    Marlowe, Christopher; Caipang, A.; Fagutao, Ferdinand F.;

    2015-01-01

    determined before the application of the stressor and at 0.5, 1 and 24 h post-exposure. There was no significant difference in the total cortisol levels of the fertilized eggs before and after handling stress. There was high expression level of hsp70 and sod before application of the stressor and......Embryos (morula stage) of Atlantic cod, Gadus morhua L., were collected and subjected to air exposure for 2 min. followed by recovery at ambient conditions in the rearing container. Total immunoreactive cortisol and transcription of selected stress- and apoptosis-related genes of the embryos were...... significantly increased at 0.5 h postexposure. The expression levels of cat and gpx were weak to moderate and were not affected by the stressor. The apoptotic genes, mcl1 and NR-13 were highly expressed and significantly increased after exposure to air. Bcl-X1 and Bcl-X2 were moderately expressed in the control...

  17. Distribution and elimination of [14C]octachlorostyrene in cod (Gadus morhua), rainbow trout (Salmo gairdneri), and blue mussel (Mytilus edulis)

    International Nuclear Information System (INIS)

    Cod (Gadus morhua) and rainbow trout (Salmo gairdneri) were given a single oral dose of 100 microCi/kg b.w. of [14C]octachlorostyrene [(14C]OCS) in peanut oil. Blue mussel (Mytilus edulis) was exposed to [14C]OCS in water. The distribution and elimination of the compound was studied by liquid scintillation counting and whole-body autoradiography. The highest degree of radioactivity in the cod and rainbow trout was measured in the liver and the visceral fat, respectively. The degree of radioactivity in the brain of cod exceeded that of the rainbow trout by a factor between 2 and 4 at all survival times. In addition to bile excretion of [14C]OCS-derived radioactivity, a possible excretion over the intestinal mucosa was suggested. The rate of elimination was slow in both species, and substantial amounts of radioactivity remained in the tissues 90 d after administration. In the blue mussel, the highest degree of radioactivity was found in the hepatopancreas. Substantial amounts of radioactivity were present in the mussel tissues 60 d after administration

  18. Harvest Pressure on Coastal Atlantic Cod (Gadus morhua) from Recreational Fishing Relative to Commercial Fishing Assessed from Tag-Recovery Data.

    Science.gov (United States)

    Kleiven, Alf Ring; Fernandez-Chacon, Albert; Nordahl, Jan-Harald; Moland, Even; Espeland, Sigurd Heiberg; Knutsen, Halvor; Olsen, Esben Moland

    2016-01-01

    Marine recreational fishing is a popular outdoor activity. However, knowledge about the magnitude of recreational catches relative to commercial catches in coastal fisheries is generally sparse. Coastal Atlantic cod (Gadus morhua) is a target species for recreational fishers in the North Atlantic. In Norway, recreational fishers are allowed to use a variety of traps and nets as well as long-line and rod and line when fishing for cod. From 2005 to 2013, 9729 cod (mean size: 40 cm, range: 15-93 cm) were tagged and released in coastal Skagerrak, southeast Norway. Both high-reward (NOK 500) and low-reward tags (NOK 50) were used in this study. Because some harvested fish (even those posting high-reward tags) may go unreported by fishers, reporting rates were estimated from mark-recovery models that incorporate detection parameters in their structure, in addition to survival and mortality estimates. During 2005 to 2013, a total of 1707 tagged cod were recovered and reported by fishers. We estimate the overall annual survival to be 33% (SE 1.5). Recreational rod and line fishing were responsible for 33.7% (SE 2.4) of total mortality, followed by commercial fisheries (15.1% SE 0.8) and recreational fixed gear (6.8% SE 0.4). Natural mortality was 44.4% (SE 2.5) of total mortality. Our findings suggest that recreational fishing-rod and line fishing in particular-is responsible for a substantial part of fishing mortality exerted on coastal cod in southern Norway. PMID:26959371

  19. Slave to the rhythm: seasonal signals in otolith microchemistry reveal age of eastern Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Hüssy, Karin; Gröger, J.; Heidemann, F.;

    2016-01-01

    Annual growth zones in cod otoliths from the eastern Baltic stock are less discrete than in other cod stocks leading to biased age reading, which recently led to a failure of age-based assessment in the eastern Baltic cod stock. In this study, we explored the applicability of minor and trace...... element patterns in cod otoliths for age determination. By first identifying elements of interest in a stock without ageing problems, western Baltic cod, we then tested their applicability on another stock without ageing problems, North Sea cod, and finally applied this knowledge to estimate age of......, the same patterns in Cu, Zn, Rb, Mg, and Mn signals occurred. All eastern Baltic cod with low visual contrast between growth zones exhibited clearly defined synchronous cycles in Cu, Zn, Rb and Pb. Using a combined finite differencing method and structural break models approach, the statistical...

  20. Preferred temperature of juvenile Atlantic cod Gadus morhua with different haemoglobin genotypes at normoxia and moderate hypoxia

    DEFF Research Database (Denmark)

    Petersen, Maria Faldborg; Steffensen, John Fleng

    2003-01-01

    was the case for HbI-1 cod, which preferred 9.8+/-1.8 degrees C during hypoxia, whereas HbI-2 cod did not show this effect. The results indicate that environmental temperature changes will lead to a distributional change in the different haemoglobin types of Atlantic cod, global warming providing an...... advantage for HbI-1 cod. However, since HbI-1 cod prefer a low temperature under hypoxic conditions, a combination of increased water temperature and hypoxia could be unfavourable for Atlantic cod stocks....... in northern regions, and the HbI(1) allele dominant in warmer areas. To determine if temperature is a selective parameter in the distribution of the haemoglobin types, the preferred temperature of the homozygous genotypes HbI-1 and HbI-2 was measured. We found that HbI-2 cod preferred a temperature...

  1. The responses of Atlantic cod (Gadus morhua L.) to ultrasound-emitting predators: stress, behavioural changes or debilitation?

    DEFF Research Database (Denmark)

    Schack, H.B.; Malte, H.; Madsen, Peter Teglberg

    2008-01-01

    A previous study has reported that Atlantic cod can be conditioned to detect ultrasonic sound pulses of high intensity. This capability has been proposed as a mean for detection and avoidance of echolocating toothed whales that emit intense ultrasonic clicks. In this study, we use acoustic...... playbacks to test the hypotheses that unconditioned cod can detect and respond to intense ultrasound from toothed whales and from echosounders. Intense ultrasound exposure of 210 dB re. 1µPa (pp) did not cause a short-term stress response in the form of bradycardia in unconditioned cod. Free-swimming cod...... exposed to ultrasonic clicks and echosounder pulses with received levels of more than 204 dB re. 1 µPa (pp) did not elicit flight responses as seen in ultrasound detecting Alosinae. Furthermore, we tested the debilitating effects of high intensity ultrasound on swimming cod with no detected changes in...

  2. Uptake and tissue distribution of C4-C7 alkylphenols in Atlantic cod (Gadus morhua): relevance for biomonitoring of produced water discharges from oil production.

    Science.gov (United States)

    Sundt, Rolf C; Baussant, Thierry; Beyer, Jonny

    2009-01-01

    The sensitivity of different tissues for assessment of chronic low-dose environmental exposure of fish to alkylphenols (APs) was investigated. We exposed Atlantic cod (Gadus morhua) in the laboratory to tritium labelled 4-tert-butylphenol, 4n-pentylphenol, 4n-hexylphenol, and 4n-heptylphenol via seawater (8 ng/l) and via contaminated feed (5 microg/kg fish per day). Measurements of different fish tissues during eight days of exposure and eight subsequent days of recovery revealed that APs administered via spiked seawater were readily taken up whereas the uptake was far less efficient when APs were administered in spiked feed. AP residues were mainly located in the bile fluid whereas the concentrations in liver were very low, indicating a rapid excretion and the liver-bile axis to be the major route of elimination. The biological half-life of APs in the exposed cod was short, between 10 and 20 h. Our study shows that in connection with biomonitoring of AP exposure in fish, assessment of AP metabolites in bile fluid is a more sensitive tool than detection of parent AP levels in liver or other internal tissues. PMID:18945454

  3. Hydrolysis of Marine Cod (Gadus Morhua) Head - Utilization of rest raw material from cod for production of ingredients for human consumption

    OpenAIRE

    Meldstad, Fataneh

    2015-01-01

    The main objective of this study was to determine the possibility of utilizing frozen marine cod head for further processing into high-quality and high-yield fish protein hydrolysates. The project included determination of the effect of mincing versus whole head, frozen storage and thawing methods on the composition and yield of FPH. The results show that freezing and thawing of cod head lead to small changes in the composition of raw material and consequently the resulting ...

  4. Effect of netting direction and number of meshes around on size selection in the codend for Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Wienbeck, Harald; Herrmann, Bent; Moderhak, Waldemar;

    2011-01-01

    We investigated experimentally the effect that turning the netting direction 90° (T90) and halving the number of meshes around in the circumference in a diamond mesh codend had on size selection of Baltic cod. The results generally agreed with predictions of a previous simulation-based study. Both...... modifications had a significant positive effect on the size selection of cod. The best selection results were obtained for a codend in which both factors were applied together. For that codend, very little between-haul variation in cod size selection was detected, especially compared to the reference codend in...

  5. Rested and stressed farmed Atlantic cod (Gadus morhua) chilled in ice or slurry and effects on quality.

    Science.gov (United States)

    Digre, Hanne; Erikson, Ulf; Aursand, Ida G; Gallart-Jornet, Lorena; Misimi, Ekrem; Rustad, Turid

    2011-01-01

    The main objectives of this study were to investigate (1) whether rested harvest of farmed cod was better maintained by chilling with slurry rather than by traditional ice storage, (2) whether chilling with slurry would be a feasible chilling method to assure low core temperatures (≤0 °C) at packing of gutted fish, and (3) the effects of superchilling compared with traditional ice on selected quality parameters of cod during storage. In the experiment, seawater slurry at -2.0 ± 0.3 °C was used. Anesthetized (AQUI-S™), percussion stunned, and stressed cod chilled in slurry were compared. Cod stored on ice were used as reference group. The fish were evaluated at the day of slaughter, and after 7 and 14 d of storage according to handling stress (initial muscle pH, muscle twitches, rigor mortis), core temperatures, quality index method, microbial counts, weight changes, salt and water content, water distribution, pH, adenosine triphosphate-degradation products, K-value, water-holding capacity, fillet color, and texture. Chilling cod in slurry was more rapid than chilling in ice. Prechilling (1 d) of cod in slurry before subsequent ice storage resulted in lower quality 7 d postmortem compared with both ice and continuous slurry storage. The potential advantages of superchilling became more prominent after 14 d with lower microbiological activity, better maintenance of freshness (lower total quality index scores and lower K-values) compared with fish stored on ice. A drawback with slurry-stored fish was that cloudy eyes developed earlier, in addition to weight gain and salt uptake compared to ice-stored fish. Practical Application: Chilling is an essential operation in any fish-processing plant. This manuscript addresses different applications of slurry ice in the processing and storage of Atlantic cod. Cod quality was assessed after 7 and 14 d of iced and superchilled storage. PMID:21535722

  6. Evolutionary redesign of the Atlantic cod (Gadus morhua L.) Toll-like receptor repertoire by gene losses and expansions.

    Science.gov (United States)

    Solbakken, Monica H; Tørresen, Ole K; Nederbragt, Alexander J; Seppola, Marit; Gregers, Tone F; Jakobsen, Kjetill S; Jentoft, Sissel

    2016-01-01

    Genome sequencing of the teleost Atlantic cod demonstrated loss of the Major Histocompatibility Complex (MHC) class II, an extreme gene expansion of MHC class I and gene expansions and losses in the innate pattern recognition receptor (PRR) family of Toll-like receptors (TLR). In a comparative genomic setting, using an improved version of the genome, we characterize PRRs in Atlantic cod with emphasis on TLRs demonstrating the loss of TLR1/6, TLR2 and TLR5 and expansion of TLR7, TLR8, TLR9, TLR22 and TLR25. We find that Atlantic cod TLR expansions are strongly influenced by diversifying selection likely to increase the detectable ligand repertoire through neo- and subfunctionalization. Using RNAseq we find that Atlantic cod TLRs display likely tissue or developmental stage-specific expression patterns. In a broader perspective, a comprehensive vertebrate TLR phylogeny reveals that the Atlantic cod TLR repertoire is extreme with regards to losses and expansions compared to other teleosts. In addition we identify a substantial shift in TLR repertoires following the evolutionary transition from an aquatic vertebrate (fish) to a terrestrial (tetrapod) life style. Collectively, our findings provide new insight into the function and evolution of TLRs in Atlantic cod as well as the evolutionary history of vertebrate innate immunity. PMID:27126702

  7. Seasonal variation in biomarkers in blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua)-Implications for environmental monitoring in the Barents Sea

    Energy Technology Data Exchange (ETDEWEB)

    Nahrgang, J., E-mail: jasmine.m.nahrgang@uit.no [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Brooks, S.J. [Norwegian Institute for Water Research (NIVA), NO-0349 Oslo (Norway); Evenset, A. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Camus, L. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University Centre In Svalbard (UNIS), NO-9171 Longyearbyen (Norway); Jonsson, M.; Smith, T.J. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Lukina, J. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University of Tromso, Faculty of Biosciences, Fisheries and Economics, Department of Arctic and Marine Biosciences, NO-9037 Tromso (Norway); Frantzen, M. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); Giarratano, E. [Centro Nacional Patagonico (CENPAT-CONICET), AR-9120 Puerto Madryn (Argentina); Renaud, P.E. [Akvaplan-niva, FRAM Centre, NO-9296 Tromso (Norway); University Centre In Svalbard (UNIS), NO-9171 Longyearbyen (Norway)

    2013-02-15

    In the Barents Sea, the limited data on biological relevant indicators and their responses to various anthropogenic stressors have hindered the development of a consistent scientific basis for selecting indicator species and developing practical procedures for environmental monitoring. Accordingly, the main aim of the present study was to develop a common set of baseline values for contaminants and biomarkers in three species, and to identify their strengths and limitations in monitoring of the Barents Sea. Blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua) were sampled from a north Norwegian fjord in March, June, September and December 2010. Digestive glands from the bivalve species and liver from Atlantic cod were analysed for biomarkers of oxidative stress (catalase [CAT], glutathione peroxidase [GPX], glutathione-S-transferase activities [GST], lipid peroxidation as thiobarbituric reactive substances [TBARS] and total oxyradical scavenging capacity [TOSC]), biotransformation (ethoxyresorufine-O-deethylase activity [EROD]) and general stress (lysosomal membrane stability [LMS]). Concentrations of polycyclic aromatic hydrocarbons (PAHs) and metals in the bivalves and PAH metabolites in fish bile were quantified. Finally, energy reserves (total lipids, proteins and carbohydrates) and electron transport system (ETS) activity in the digestive gland of the bivalves and liver of Atlantic cod provided background information for reproductive cycle and general physiological status of the organisms. Blue mussel and Icelandic scallop showed very similar trends in biological cycle, biomarker expression and seasonality. Biomarker baselines in Atlantic cod showed weaker seasonal variability. However, important biological events may have been undetected due to the large time intervals between sampling occasions. Physiological biomarkers such as energy reserves and ETS activity were recommended as complementary parameters to the

  8. Seasonal variation in biomarkers in blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua)—Implications for environmental monitoring in the Barents Sea

    International Nuclear Information System (INIS)

    In the Barents Sea, the limited data on biological relevant indicators and their responses to various anthropogenic stressors have hindered the development of a consistent scientific basis for selecting indicator species and developing practical procedures for environmental monitoring. Accordingly, the main aim of the present study was to develop a common set of baseline values for contaminants and biomarkers in three species, and to identify their strengths and limitations in monitoring of the Barents Sea. Blue mussel (Mytilus edulis), Icelandic scallop (Chlamys islandica) and Atlantic cod (Gadus morhua) were sampled from a north Norwegian fjord in March, June, September and December 2010. Digestive glands from the bivalve species and liver from Atlantic cod were analysed for biomarkers of oxidative stress (catalase [CAT], glutathione peroxidase [GPX], glutathione-S-transferase activities [GST], lipid peroxidation as thiobarbituric reactive substances [TBARS] and total oxyradical scavenging capacity [TOSC]), biotransformation (ethoxyresorufine-O-deethylase activity [EROD]) and general stress (lysosomal membrane stability [LMS]). Concentrations of polycyclic aromatic hydrocarbons (PAHs) and metals in the bivalves and PAH metabolites in fish bile were quantified. Finally, energy reserves (total lipids, proteins and carbohydrates) and electron transport system (ETS) activity in the digestive gland of the bivalves and liver of Atlantic cod provided background information for reproductive cycle and general physiological status of the organisms. Blue mussel and Icelandic scallop showed very similar trends in biological cycle, biomarker expression and seasonality. Biomarker baselines in Atlantic cod showed weaker seasonal variability. However, important biological events may have been undetected due to the large time intervals between sampling occasions. Physiological biomarkers such as energy reserves and ETS activity were recommended as complementary parameters to the

  9. A study of lipid- and water-soluble arsenic species in liver of Northeast Arctic cod (Gadus morhua) containing high levels of total arsenic.

    Science.gov (United States)

    Sele, Veronika; Sloth, Jens J; Julshamn, Kåre; Skov, Kasper; Amlund, Heidi

    2015-04-01

    In the present study liver samples (n=26) of Northeast Arctic cod (Gadus morhua), ranging in total arsenic concentrations from 2.1 to 240mg/kg liver wet weight (ww), were analysed for their content of total arsenic and arsenic species in the lipid-soluble and water-soluble fractions. The arsenic concentrations in the lipid fractions ranged from 1.8 to 16.4mg As/kg oil of liver, and a linear correlation (r(2)=0.80, pHPLC-ICP-MS), revealed the presence of several arsenolipids. Three major arsenic-containing hydrocarbons (C17H39AsO, C19H41AsO and C23H37AsO) and five arsenic-containing fatty acids (C17H35AsO3, C19H39AO3, C19H37AsO3, C23H37AsO3 and C24H37AsO3) were identified using HPLC coupled to quadrupole time-of-flight mass spectrometry (qTOF-MS). Arsenobetaine was the major arsenic species in the water-soluble fraction of the livers, while dimethylarsinate, arsenocholine and inorganic arsenic were minor constituents. Inorganic arsenic accounted for less than 0.1% of the total arsenic in the liver samples. PMID:25618262

  10. Adjustments of molecular key components of branchial ion and pH regulation in Atlantic cod (Gadus morhua) in response to ocean acidification and warming.

    Science.gov (United States)

    Michael, Katharina; Kreiss, Cornelia M; Hu, Marian Y; Koschnick, Nils; Bickmeyer, Ulf; Dupont, Sam; Pörtner, Hans-O; Lucassen, Magnus

    2016-03-01

    Marine teleost fish sustain compensation of extracellular pH after exposure to hypercapnia by means of efficient ion and acid-base regulation. Elevated rates of ion and acid-base regulation under hypercapnia may be stimulated further by elevated temperature. Here, we characterized the regulation of transepithelial ion transporters (NKCC1, NBC1, SLC26A6, NHE1 and 2) and ATPases (Na(+)/K(+) ATPase and V-type H(+) ATPase) in gills of Atlantic cod (Gadus morhua) after 4 weeks of exposure to ambient and future PCO2 levels (550 μatm, 1200 μatm, 2200 μatm) at optimum (10 °C) and summer maximum temperature (18 °C), respectively. Gene expression of most branchial ion transporters revealed temperature- and dose-dependent responses to elevated PCO2. Transcriptional regulation resulted in stable protein expression at 10 °C, whereas expression of most transport proteins increased at medium PCO2 and 18 °C. mRNA and protein expression of distinct ion transport proteins were closely co-regulated, substantiating cellular functional relationships. Na(+)/K(+) ATPase capacities were PCO2 independent, but increased with acclimation temperature, whereas H(+) ATPase capacities were thermally compensated but decreased at medium PCO2 and 10 °C. When functional capacities of branchial ATPases were compared with mitochondrial F1Fo ATP-synthase strong correlations of F1Fo ATP-synthase and ATPase capacities generally indicate close coordination of branchial aerobic ATP demand and supply. Our data indicate physiological plasticity in the gills of cod to adjust to a warming, acidifying ocean within limits. In light of the interacting and non-linear, dose-dependent effects of both climate factors the role of these mechanisms in shaping resilience under climate change remains to be explored. PMID:26688541

  11. Multi-decadal responses of a cod (Gadus morhua) population to human-induced trophic changes, fishing, and climate

    DEFF Research Database (Denmark)

    Eero, Margit; MacKenzie, Brian; Köster, Fritz;

    2011-01-01

    Understanding how human impacts have interacted with natural variability to affect populations and ecosystems is required for sustainable management and conservation. The Baltic Sea is one of the few large marine ecosystems worldwide where the relative contribution of several key forcings to...... changes in fish populations can be analyzed with empirical data. In this study we investigate how climate variability and multiple human impacts (fishing, marine mammal hunting, eutrophication) have affected multi-decadal scale dynamics of cod in the Baltic Sea during the 20th century.We document...... significant climate-driven variations in cod recruitment production at multi-annual timescales, which had major impacts on population dynamics and the yields to commercial fisheries. We also quantify the roles of marine mammal predation, eutrophication, and exploitation on the development of the cod...

  12. Oceanographic influences on the distribution of Baltic cod, Gadus morhua , during spawning in the Bornholm Basin of the Baltic Sea

    DEFF Research Database (Denmark)

    Tomkiewicz, Jonna; Lehmann, K.M.; St. John, Michael

    1998-01-01

    results from a survey carried out during the 1995 spawning period in the Bornholm Basin, at present the main spawning area of this stock. Cod distribution, abundance and population structure were estimated from hydroacoustic and trawl data and related to hydrographic parameters as well as to bottom depth....... In the central basin, cod were aggregated in an intermediate layer about 15 m thick. This area of peak abundance was defined at its upper limit by the halocline and at the lower limit by oxygen content. The majority of individuals caught in the basin centre were in spawning or pre-spawning condition...... with a high proportion of males to females. On the basin slopes, aggregations of cod were found near the bottom. These individuals were mainly immature and maturing stages with an increasing proportion of females to males with size. Salinity and oxygen conditions were found to be the major factors...

  13. The Effects of Temperature, Hypoxia and Hypercapnia on the Metabolism of Atlantic Cod Gadus morhua

    DEFF Research Database (Denmark)

    Tirsgård, Bjørn

    thesis is a series of studies investigating how two of the most important abiotic environmental parameters, temperature and low oxygen levels (hypoxia) affect different aspects of larvae and juvenile Atlantic cod metabolism. The temperature studies were developed especially with the aim to be implemented...... aquaculture systems exposing fish to chronically elevated CO2 levels (Timmons et al., 2010) I also investigated the effect of elevated dissolved CO2 concentration (termed hypercapnia) on the metabolism and digestion in the Atlantic cod. Migration between water layers might change water temperature several...... important for bio-energetic models (Werner et al., 1996; Leising and Franks, 1999; Werner et al., 2001; Lough et al., 2005). The temperature effect on the metabolism of Atlantic cod larvae however have received little attention (Laurence, 1978; Finn et al., 2002; Peck and Buckley, 2008), likely due to...

  14. Where does the cod come from? Panels of gene‐associated markers provide vastly improved origin assignment in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Hansen, Jakob Hemmer; Taylor, Martin; Carvalho, Gary

    2012-01-01

    Methods for determining the geographical origin of individual fish are in high demand for fighting illegal, unreported, and unregulated (IUU) fishing and for independent control of catch certificates and “eco‐labels”. Hitherto, genetic origin assignment of marine fish has been hampered by the......‐European variation in more than 1200 gene‐associated SNPs in cod and found that levels of differentiation for a subset of 132 SNPs was best explained by a model including directional selection. These high‐differentiation SNPs were used for designing “minimum panels with maximum power” for a number of case studies...... relevant for controlling illegal fishing, ecolabels, and fisheries management. Our results demonstrate how application of gene‐associated markers will probably revolutionize origin assignment in cod by providing faster, cheaper, and more reliable tools for origin assignment...

  15. Trypsin and trypsinogen as indices of growth and survival potential of cod (Gadus morhua L.) larvae. In: The propagation of cod Gadus morhua L.: an international symposium, Arendal, 14 - 17 June 1983

    OpenAIRE

    Hjelmeland, Knut; Huse, Ingvar; Jørgensen, Terje; Molvik, G.; Raa, Jan

    1984-01-01

    Using a radioimmunoassay it could be demonstrated that the content of trypsin and trypsinogen in cod larvae increased markedly during the first 4 days after hatching. In the same period the trypsin activity, measured by the conventional method, was constant, but increased considerably on day 5. At that time the larvae were ready for the first feed intake. After day 5 the total quantity of trypsin and trypsinogen dropped again, independent of whether the larvae received an...

  16. Electrical stunning of farmed Atlantic cod Gadus morhua L.: a comparison of an industrial and experimental method

    NARCIS (Netherlands)

    Digre, H.; Erikson, U.; Misimi, E.; Lambooij, E.; Vis, van de J.W.

    2010-01-01

    An industrial and experimental electrical method for stunning farmed Atlantic cod in air and seawater (SW), respectively, were compared. The impacts of sedation with AQUI-S™ and exercise to exhaustion before electrical stunning were also assessed to monitor the possible depletion of rested muscle en

  17. Stable isotope evidence for late medieval (14th-15th C) origins of the eastern Baltic cod (Gadus morhua) fishery

    DEFF Research Database (Denmark)

    Orton, D.C.; Makowiecki, D.; de Roo, T.;

    2011-01-01

    hypotheses we use stable carbon and nitrogen isotope analysis to determine likely catch regions of 74 cod vertebrae and cleithra from 19 Baltic archaeological sites dated from the 8th to the 16th centuries. δ13C and δ15N signatures for six possible catch regions were established using a larger sample of...

  18. Effect of bottom type on catch rates of North Sea cod (Gadus morhua) in surveys with commercial fishing vessels

    DEFF Research Database (Denmark)

    Wieland, Kai; Pedersen, Eva Maria; Olesen, Hans Jakob;

    2009-01-01

    Seven surveys with commercial fishing vessels were conducted during a collaborative fishermen-scientist project on the distribution of cod in the north-eastern North Sea between June 2006 and June 2008. A flyshooter, a trawler and a gillnetter participated in this study. In general, catch rates...

  19. Food resource utilization by juvenile Baltic cod Gadus morhua : a mechanism potentially influencing recruitment success at the demersal juvenile stage?

    DEFF Research Database (Denmark)

    Hüssy, Karin; St. John, Michael; Böttcher, U.

    1997-01-01

    , than those reported to be consumed by juveniles in other areas. The apparent overlap in food resource utilization among the different size groups of demersal juveniles observed in this study suggests that in years with low prey abundance, or high abundance of pelagic juveniles, strong intra-specific...... competition for food. resources may affect the recruitment success of Baltic cod....

  20. Improving the size- and species selectivity of cod (Gadus morhua) in demersal mixed-species trawl fisheries

    DEFF Research Database (Denmark)

    Krag, Ludvig Ahm

    can substantially reduce the catch of cod without simultaneously reduce the catch of the target species. To optimise the trade-off between discard and loss of marketable catch, solutions have to be specific to particular fisheries or populations of fish. Papers 1 and 3 provide specific examples of how...

  1. Effects of sex, stock, and environment on the shape of known-age Atlantic cod ( Gadus morhua ) otoliths

    DEFF Research Database (Denmark)

    Cardinale, M.; Doering-Arjes, P.; Kastowsky, M.; Mosegaard, Henrik

    2004-01-01

    temperature and diet regime) on otolith shape and morphometrics. Using otolith shape, cod individuals were significantly separated into Bank and Plateau stocks. Total classification success was between 79% and 85% between stocks and between 85% and 96% between environments for the different age classes. The...

  2. The third serine proteinase with chymotrypsin specificity isolated from Atlantic cod (Gadus morhua) is a type-II elastase

    DEFF Research Database (Denmark)

    Asgeirsson, B; Leth-Larsen, Rikke; Thórólfsson, M; Nedertoft, M M; Højrup, P

    1998-01-01

    catalytic efficiency of elastase C. The effects of several inhibitors on cod elastase C were identical to effects on chymotrypsins variants A and B, but dissimilar when compared with porcine pancreatic elastase. On the basis of the specificity and amino acid sequence, we conclude that the enzyme under study...

  3. Long-term stability and effective population size in North Sea and Baltic Sea cod ( Gadus morhua )

    DEFF Research Database (Denmark)

    Poulsen, Nina Aagaard; Eg Nielsen, Einar; Schierup, M.H.; Loeschcke, V.; Grønkjær, P.

    2006-01-01

    DNA from archived otoliths was used to explore the temporal stability of the genetic composition of two cod populations, the Moray Firth (North Sea) sampled in 1965 and 2002, and the Bornholm Basin (Baltic Sea) sampled in 1928 and 1997. We found no significant changes in the allele frequencies for...... the Moray Firth population, while subtle but significant genetic changes over time were detected for the Bornholm Basin population. Estimates of the effective population size (N-e) generally exceeded 500 for both populations when employing a number of varieties of the temporal genetic method. However...... the number of alleles commonly reported at microsatellite loci in Atlantic cod is best explained by N-e's exceeding thousand. Recent fishery-induced bottlenecks can, however, not be ruled out as an explanation for the apparent discrepancy between high levels of variability and recently reported...

  4. An abundance estimate of ling ( Molva molva ) and cod ( Gadus morhua ) in the Skagerrak and the northeastern North Sea, 1872

    DEFF Research Database (Denmark)

    Poulsen, R.T.; Cooper, A.B.; Holm, P.;

    2007-01-01

    Fisheries management may suffer from historical myopia, because most stock assessments are based on time series which are ca. 30-40 years long. This investigation examines changes in population dynamics of two gadoid species in the Skagerrak- northeastern North Sea on a century scale, and argues...... that long-term, historical abundance estimates are relevant to the determination of biomass reference points in fisheries management. Situated within the field of historical ecology, this paper presents findings on the abundance of ling and cod in 1872. Calculations are based on historical CPUE and catch...... data. Ling abundance was ca. 100-200 million individuals aged 4+ and probably exceeded cod abundances (ca. 3 million individuals aged 3+) in the Skagerrak and in the northeastern North Sea in 1872. Current ling abundances are unknown but probably lower than in 1872, as reflected in declining landings...

  5. Interactions between xenoestrogens and ketoconazole on hepatic CYP1A and CYP3A, in juvenile Atlantic cod (Gadus morhua)

    OpenAIRE

    Hasselberg, Linda; Grøsvik, Bjørn Einar; Goksøyr, Anders; Celander, Malin C

    2005-01-01

    Background: Xenoestrogens and antifungal azoles probably share a common route of metabolism, through hepatic cytochrome P450 (CYP) enzymes. Chemical interactions with metabolic pathways may affect clearance of both xenobiotics and endobiotics. This study was carried out to identify possible chemical interactions by those substances on CYP1A and CYP3A, in Atlantic cod liver. We investigated effects of two xenoestrogens (nonylphenol and ethynylestradiol) and of the mo...

  6. Damage and functional recovery of the Atlantic cod (Gadus morhua) inner ear hair cells following local injection of gentamicin

    OpenAIRE

    Faucher, Karine; Aas-Hansen, Øyvind; Damsgård, Borge; Laukli, Einar; Stenklev, Niels-Christian

    2009-01-01

    This study addresses the ultrastructural and functional damage and subsequent recovery of the inner ear in the Atlantic cod following intrasaccular gentamicin injection. Inner ear damage was assessed using SEM and measurements of AEP following 250-Hz pure-tone stimuli. Data from gentamicin-treated fish were compared with control (no injection) and sham (injection of saline) fish. Control fish had normal response thresholds associated with welldeveloped hair cell bundle...

  7. The effect of temperature and body size on metabolic scope of activity in juvenile Atlantic cod Gadus morhua L

    DEFF Research Database (Denmark)

    Tirsgaard, Bjørn; Behrens, Jane; Steffensen, John Fleng

    2015-01-01

    respectively 14.5, 11.8 and 10.9 °C in a 50, 200 and 450 g cod. Irrespective of BM cold water temperatures resulted in a reduction (30–35%) of MS whereas the reduction of MS at warm temperatures was only evident for larger fish (200 and 450 g), caused by plateauing of MMR at 10 °C and above. Warm temperatures...

  8. Chronic CO2 exposure markedly increases the incidence of cataracts in juvenile Atlantic cod Gadus morhua L

    DEFF Research Database (Denmark)

    Moran, Damian; Tubbs, Lincoln; Støttrup, Josianne G.

    2012-01-01

    A study was undertaken to test the affect of chronic exposure to elevated dissolved carbon dioxide on juvenile Atlantic cod. The CO2 treatment concentrations were designated as low (1–2mgL−1, 1000μatm), medium (8mgL−1, 3500μatm) and high (18mgL−1, 8500μatm), and the fish were reared at 10°C and 2...

  9. Cod larvae sampling with a large pump off SW-Island. In: The propagation of cod Gadus morhua L.: an international symposium, Arendal, 14 - 17 June 1983

    OpenAIRE

    Fridgeirsson, E.

    1984-01-01

    In an attempt to collect adequate samples of cod and other larvae in the spawning areas off SW-Iceland, experiments using a large fish pump for this purpose were carried out from 1981 to 1983. The pump used was an 8" hydraulic centrifugal pump commonly used by fishing vessels in Iceland. In 1981 samples were taken at a fixed station off Reykjanes at 6-8 depths from 0 to 34 m at 4 h intervals for 36 h. In 1982 and 1983 vertical profiles were taken at various stations. F...

  10. Water balance in cod eggs. In: The propagation of cod Gadus morhua L.: an international symposium, Arendal, 14 - 17 June 1983

    OpenAIRE

    Riis-Vestergaard, J.

    1984-01-01

    The yolk osmolarity of cod eggs decreases from about 400 mOsm 2 days after spawning to 300 mOsm at hatching, as opposed to a sea water osmolarity of c. l000 nOsm. The osmolarity difference forces an osmotic water loss upon the eggs. The embryos take 3-4 weeks to reach a developmental stage allowing them to compensate water losses by the mechanisms known from the adult fish. In this period the rate of osmotic water loss is minimized by a low water permeability: 0.24 x 10^-6 cm^3 cm^-2 S^-1 on ...

  11. Effect of sub-lethal exposure to ultraviolet radiation on the escape performance of Atlantic cod larvae (Gadus morhua.

    Directory of Open Access Journals (Sweden)

    Yuichi Fukunishi

    Full Text Available The amount of ultraviolet (UV radiation reaching the earth's surface has increased due to depletion of the ozone layer. Several studies have reported that UV radiation reduces survival of fish larvae. However, indirect and sub-lethal impacts of UV radiation on fish behavior have been given little consideration. We observed the escape performance of larval cod (24 dph, SL: 7.6±0.2 mm; 29 dph, SL: 8.2±0.3 mm that had been exposed to sub-lethal levels of UV radiation vs. unexposed controls. Two predators were used (in separate experiments: two-spotted goby (Gobiusculus flavescens; a suction predator and lion's mane jellyfish (Cyanea capillata; a "passive" ambush predator. Ten cod larvae were observed in the presence of a predator for 20 minutes using a digital video camera. Trials were replicated 4 times for goby and 5 times for jellyfish. Escape rate (total number of escapes/total number of attacks ×100, escape distance and the number of larvae remaining at the end of the experiment were measured. In the experiment with gobies, in the UV-treated larvae, both escape rate and escape distance (36%, 38±7.5 mm respectively were significantly lower than those of control larvae (75%, 69±4.7 mm respectively. There was a significant difference in survival as well (UV: 35%,63%. No apparent escape response was observed, and survival rate was not significantly different, between treatments (UV: 66%,74% in the experiment with jellyfish. We conclude that the effect and impact of exposure to sub-lethal levels of UV radiation on the escape performance of cod larvae depends on the type of predator. Our results also suggest that prediction of UV impacts on fish larvae based only on direct effects are underestimations.

  12. Is chemically dispersed oil more toxic to Atlantic cod (Gadus morhua larvae than mechanically dispersed oil? A transcriptional evaluation

    Directory of Open Access Journals (Sweden)

    Olsvik Pål A

    2012-12-01

    Full Text Available Abstract Background The use of dispersants can be an effective way to deal with acute oil spills to limit environmental damage, however very little is known about whether chemically dispersed oil have the same toxic effect on marine organisms as mechanically dispersed oil. We exposed Atlantic cod larvae to chemically and mechanically dispersed oil for four days during the first-feeding stage of development, and collected larvae at 14 days post hatch for transcriptional analysis. A genome-wide microarray was used to screen for effects and to assess whether molecular responses to chemically and mechanically dispersed oil were similar, given the same exposure to oil (droplet distribution and concentration with and without the addition of a chemical dispersant (Dasic NS. Results Mechanically dispersed oil induced expression changes in almost three times as many transcripts compared to chemically dispersed oil (fold change >+/−1.5. Functional analyses suggest that chemically dispersed oil affects partly different pathways than mechanically dispersed oil. By comparing the alteration in gene transcription in cod larvae exposed to the highest concentrations of either chemically or mechanically dispersed oil directly, the chemically dispersed oil affected transcription of genes involved nucleosome regulation, i.e. genes encoding proteins participating in DNA replication and chromatin formation and regulation of cell proliferation, whereas the mechanically dispersed oil most strongly affected genes encoding proteins involved in proteasome-mediated protein degradation. Cyp1a was the transcript that was most strongly affected in both exposure groups, with a 60-fold induction in the two high-exposure groups according to the RT-qPCR data, but no significant difference in transcriptional levels was observed between the two treatments. Conclusions In summary, dispersants do not appear to add to the magnitude of transcriptional responses of oil compounds but

  13. Copepods enhance nutritional status, growth and development in Atlantic cod (Gadus morhua L.) larvae - can we identify the underlying factors?

    Science.gov (United States)

    Karlsen, Ørjan; van der Meeren, Terje; Rønnestad, Ivar; Mangor-Jensen, Anders; Galloway, Trina F; Kjørsvik, Elin; Hamre, Kristin

    2015-01-01

    The current commercial production protocols for Atlantic cod depend on enriched rotifers and Artemia during first-feeding, but development and growth remain inferior to fish fed natural zooplankton. Two experiments were conducted in order to identify the underlying factors for this phenomenon. In the first experiment (Exp-1), groups of cod larvae were fed either (a) natural zooplankton, mainly copepods, increasing the size of prey as the larvae grew or (b) enriched rotifers followed by Artemia (the intensive group). In the second experiment (Exp-2), two groups of larvae were fed as in Exp-1, while a third group was fed copepod nauplii (approximately the size of rotifers) throughout the larval stage. In both experiments, growth was not significantly different between the groups during the first three weeks after hatching, but from the last part of the rotifer feeding period and onwards, the growth of the larvae fed copepods was higher than that of the intensive group. In Exp-2, the growth was similar between the two copepod groups during the expeimental period, indicating that nutrient composition, not prey size caused the better growth on copepods. Analyses of the prey showed that total fatty acid composition and the ratio of phospholipids to total lipids was slightly different in the prey organisms, and that protein, taurine, astaxanthin and zinc were lower on a dry weight basis in rotifers than in copepods. Other measured nutrients as DHA, all analysed vitamins, manganese, copper and selenium were similar or higher in the rotifers. When compared to the present knowledge on nutrient requirements, protein and taurine appeared to be the most likely limiting nutrients for growth in cod larvae fed rotifers and Artemia. Larvae fed rotifers/Artemia had a higher whole body lipid content than larvae fed copepods at the end of the experiment (stage 5) after the fish had been fed the same formulated diet for approximately 2 weeks. PMID:26038712

  14. Effect of water treatment systems on gut microbial community in reared larvae of Atlantic Cod (Gadus morhua)

    OpenAIRE

    Truong, Thi My Hanh

    2012-01-01

    The experiment was carried out from 23rd Junuary to 24th March 2011 at Sealab. Atlantic cod larvae were reared with water from three different systems: flow-though, maturated water and recirculation water. The water, larvae and feed specimens will be sampled from those three systems for microbial analysis by PCR-DGGE (denaturing gradient gel electrophoresis) and sequencing of bands. DNA will be extracted from water, feed and larvae, and used as template in PCR to amplify 16S rRNA encoding gen...

  15. THE EFFECT OF HYPOXIA ON THE MAXIMUM MATABOLIC RATE AND SPECIFIC DYNAMIC ACTION IN ATLANTIC COD Gadus morhua

    DEFF Research Database (Denmark)

    Steffensen, John Fleng

    2010-01-01

    and fish kept at high densities. Feeding is followed by an increase in the metabolic rate. termed the specific dynamic action (SDA). SDA integrates all the energetic expenditures involved in feeding. It is generally agreed that the increased metabolic rate is caused by biochemical transformation of...... food and protein synthesis leading to the deposition and turnover of tissue components. Oxygen consumption of juvenile cod was measured with computerized intennittent respirometry at 10 0 C. A specially designed Plexiglas respirometer with a "chimney" in either end allowed feeding without disturbing...... and stressing the fi sh. The fish were fed single rations of fillets of herring, equivalent to 5 % wet body mass. Hypoxia was controlled by an oxygen regulator injecting compressed nitrogen in the water via a solenoid valve. In addition the maximum metabolic rate of starved fish was measured in...

  16. Early life of key fish species, capelin Mallotus villosus and Atlantic cod Gadus morhua, in West Greenland

    DEFF Research Database (Denmark)

    Malanski, Evandro

    for the fish larvae during the summer. The duration of the productive season is of great importance for the early life of fish. The present thesis investigates the diets of capelin and cod in the subarctic Kapisigdlit, as well as the feeding of non-commercial larval fish in the entire Godthåbsfjord system...... species were found in the area, and 3 main assemblages were identified according to their similarities, which are related to the hydrographic zones. Fish larvae may benefit from the estuarine circulation to distribute themselves from the spawning areas through the Godthåbsfjord. The diet of the larval...... and size for overwintering. With respect to diet of capelin larvae, the feeding incidence was found to be greater than 50% and we found a broader spectra of prey taxa than seen in other investigations (Paper IV). The dominating prey items in both localities are: numerically, the rotifers and cyclopoid...

  17. Atlantic cod (Gadus morhua) larvae can biosynthesis phospholipid de novo from 2-oleoyl-glycerol and glycerol precursors.

    Science.gov (United States)

    Li, Keshuai; Olsen, Rolf Erik; Østensen, Mari-Ann; Altin, Dag; Kjørsvik, Elin; Olsen, Yngvar

    2016-02-01

    The dietary requirement of phospholipid (PL) of fish larvae has been suggested to originate in an inefficient ability for de novo biosynthesis of PL based on dietary triacylglycerol (TAG). The main objective of the present study was to investigate whether cod larvae could synthesis PL from sn-2-monoacylglycerol (2-MAG) and glycerol precursors. A tube feeding method was used to deliver equal molar aliquots of 2-oleoyl-[1,2,3-(3)H]glycerol and [U-(14)C] glycerol together with bovine serum albumin (BSA) bound 16:0 (palmitic acid) and 22:6n-3 (docosahexaenoic acid, DHA), with or without choline chloride to the foregut of anesthetized cod larvae and thereafter monitoring the metabolism of these components in the larvae through 4 h following injection. Our results showed that both 2-MAG and glycerol precursors contributed to the de novo synthesis of phosphatidylcholine (PC) and the 2-MAG pathway predominated over the G-3-P (glycerol-3-phosphate) pathway in the synthesis of TAG and PC. The molecular ratio of PC/TAG obtained from the 2-MAG and the G-3-P pathways was 0.44-0.74 and 1.02-2.06 within the first hour of tube feeding, suggesting they might have comparable biosynthesis ability of PC and TAG under the conditions of the present study. Furthermore, supplementation of choline chloride significantly increased PC/TAG ratio (p < 0.05) for both pathways. However, further studies are needed to quantify the enzyme activity involved in the CDP-choline (cytidine diphosphate choline) pathway, and the function of choline either in simulating PC synthesis or TAG catabolism or both needs further investigation. PMID:26349454

  18. Does high offshore petroleum activity affect the lipid composition in wild Atlantic Cod (Gadus morhua) from the North Sea?

    OpenAIRE

    Liu, Li

    2012-01-01

    A combined two step extraction, using hexane/methanol to extract neutral lipids and chloroform/methanol to extract polar lipids, has been developed and validation. Four times methanol wash were done to hexane/methanol extract and merged with chloroform/methanol extract to ensure optimized lipid classes distribution between two solvent systems. Quick freeze of hexane/methanol solvent system by dry ice was adopted to avoid adverse effect of generation of micelle. The glass aminopropyl bonded co...

  19. Uptake and tissue distribution of C{sub 4}-C{sub 7} alkylphenols in Atlantic cod (Gadus morhua): Relevance for biomonitoring of produced water discharges from oil production

    Energy Technology Data Exchange (ETDEWEB)

    Sundt, Rolf C. [IRIS-International Research Institute of Stavanger, P.O. Box 8046, N-4068 Stavanger (Norway)], E-mail: rolf.sundt@iris.no; Baussant, Thierry [IRIS-International Research Institute of Stavanger, P.O. Box 8046, N-4068 Stavanger (Norway); Beyer, Jonny [IRIS-International Research Institute of Stavanger, P.O. Box 8046, N-4068 Stavanger (Norway); University of Stavanger, N-4036 Stavanger (Norway)

    2009-01-15

    The sensitivity of different tissues for assessment of chronic low-dose environmental exposure of fish to alkylphenols (APs) was investigated. We exposed Atlantic cod (Gadus morhua) in the laboratory to tritium labelled 4-tert-butylphenol, 4n-pentylphenol, 4n-hexylphenol, and 4n-heptylphenol via seawater (8 ng/l) and via contaminated feed (5 {mu}g/kg fish per day). Measurements of different fish tissues during eight days of exposure and eight subsequent days of recovery revealed that APs administered via spiked seawater were readily taken up whereas the uptake was far less efficient when APs were administered in spiked feed. AP residues were mainly located in the bile fluid whereas the concentrations in liver were very low, indicating a rapid excretion and the liver-bile axis to be the major route of elimination. The biological half-life of APs in the exposed cod was short, between 10 and 20 h. Our study shows that in connection with biomonitoring of AP exposure in fish, assessment of AP metabolites in bile fluid is a more sensitive tool than detection of parent AP levels in liver or other internal tissues.

  20. Antioxidant activity of Cod (Gadus morhua) protein hydrolysates: In vitro assays and evaluation in 5% fish oil-in-water emulsion

    DEFF Research Database (Denmark)

    Farvin, Sabeena; Andersen, Lisa Lystbæk; Nielsen, Henrik Hauch;

    2014-01-01

    Cod protein hydrolysates were fractionated according to the molecular mass into three fractions of >5kDa, 3–5kDa and......Cod protein hydrolysates were fractionated according to the molecular mass into three fractions of >5kDa, 3–5kDa and...

  1. Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs

    Science.gov (United States)

    Andreassen, Rune; Rangnes, Fredrik; Sivertsen, Maria; Chiang, Michelle; Tran, Michelle; Worren, Merete Molton

    2016-01-01

    Background Atlantic cod (Gadus morhua) is among the economically most important species in the northern Atlantic Ocean and a model species for studying development of the immune system in vertebrates. MicroRNAs (miRNAs) are an abundant class of small RNA molecules that regulate fundamental biological processes at the post-transcriptional level. Detailed knowledge about a species miRNA repertoire is necessary to study how the miRNA transcriptome modulate gene expression. We have therefore discovered and characterized mature miRNAs and their corresponding miRNA genes in Atlantic cod. We have also performed a validation study to identify suitable reference genes for RT-qPCR analysis of miRNA expression in Atlantic cod. Finally, we utilized the newly characterized miRNA repertoire and the dedicated RT-qPCR method to reveal miRNAs that are highly expressed in certain organs. Results The discovery analysis revealed 490 mature miRNAs (401 unique sequences) along with precursor sequences and genomic location of the miRNA genes. Twenty six of these were novel miRNA genes. Validation studies ranked gmo-miR-17-1—5p or the two-gene combination gmo-miR25-3p and gmo-miR210-5p as most suitable qPCR reference genes. Analysis by RT-qPCR revealed 45 miRNAs with significantly higher expression in tissues from one or a few organs. Comparisons to other vertebrates indicate that some of these miRNAs may regulate processes like growth, lipid metabolism, immune response to microbial infections and scar damage repair. Three teleost-specific and three novel Atlantic cod miRNAs were among the differentially expressed miRNAs. Conclusions The number of known mature miRNAs was considerably increased by our identification of miRNAs and miRNA genes in Atlantic cod. This will benefit further functional studies of miRNA expression using deep sequencing methods. The validation study showed that stable miRNAs are suitable reference genes for RT-qPCR analysis of miRNA expression. Applying RT-qPCR we

  2. A baseline study of metals in cod (Gadus morhua) from the North Sea and coastal Norwegian waters, with focus on mercury, arsenic, cadmium and lead

    International Nuclear Information System (INIS)

    Highlights: • Highest concentration of Hg was not found in the central part but in the northern part of the North Sea. • The Hg concentrations in coastal and fjord cod increased southward along the coast. • Only three samples out of some 1200 cod muscle showed Hg concentration higher than 0.5 mg kg−1, the EU limit for foodstuffs. • Cd concentrations in liver of coastal and fjord cod increased northward along the coast. -- Abstract: This study is one of several baseline studies that will provide basic and reliable information about the content of undesirable substances in important species of fish caught in Norwegian waters. Concentrations of metals in the muscle and livers of 516 cod caught at 22 positions in the North Sea were analysed. An additional 687 cod were caught from 13 fjords and coastal areas along the coast of Norway. Three out of 1203 samples of muscle exceeded the maximum limit of 0.5 mg Hg kg−1 wet weight set by the EU for foodstuffs. The mercury concentration in cod muscle was higher and the cadmium concentration in the liver was lower in the North Sea and coastal areas in the southern part of Norway than in the Barents Sea and coastal areas in the northern part of Norway. These differences are perhaps caused by differences in the cod diet

  3. The role of predation by harp seals (Pagophilus groenlandicus) in the collapse and non-recovery of northern Gulf of St. Lawrence cod (Gadus morhua)

    OpenAIRE

    Chassot, Emmanuel; Duplisea, Daniel,; Hammill, Mike; Caskenette, Amanda; Bousquet, Nicolas; Lambert, Yvan; Stenson, Garry

    2009-01-01

    A statistical catch-at-age model was developed to assess the effects of predation by the northwest Atlantic harp seal population on northern Gulf of St. Lawrence cod by estimating the relative importance of different sources of mortality that affected the stock during a period of collapse and non-recovery. Cod recruitment at age 1 is modeled via a non-linear stock-recruitment relationship based on total egg production and accounts for changes in female length-at-maturity and cod condition. Na...

  4. Localisation of nursery areas based on comparative analyses of the horizontal and vertical distribution patterns of juvenile Baltic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Nielsen, J. Rasmus; Lundgren, Bo; Kristensen, Kasper;

    2013-01-01

    Knowledge of the spatial distribution of juvenile cod is essential for obtaining precise recruitment data to conduct sustainable management of the eastern and western Baltic cod stocks. In this study, the horizontal and vertical distribution and density patterns of settled juvenile 0- and 1-group...... Baltic cod are determined, and their nursery areas are localised according to the environmental factors affecting them. Comparative statistical analyses of biological, hydrographic and hydroacoustic data are carried out based on standard ICES demersal trawl surveys and special integrated trawl and...... acoustic research surveys. Horizontal distribution maps for the 2001–2010 cohorts of juvenile cod are further generated by applying a statistical log-Gaussian Cox process model to the standard trawl survey data. The analyses indicate size-dependent horizontal and distinct vertical and diurnal distribution...

  5. AFSC/RACE/FBEP/Hurst: Distributional patterns of 0-group Pacific cod (Gadus macrocephalus) in the eastern Bering Sea under variable recruitment and thermal conditions

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset is from a study that analyzed the late summer distribution of juvenile Pacific cod in the eastern Bering Sea for 6 cohorts (2004-2009), based on...

  6. Slaughter Methods and Processing of Farmed Atlantic Cod ( Gadus morhua ): welfare aspects and flesh quality

    OpenAIRE

    Digre, Hanne

    2011-01-01

    Atlantic cod is an important species for food production in Norway, and over the last couples of decades; Atlantic cod farming has gradually evolved as an industry in Norway. The harvesting procedures of farmed fish have gained major attention both in the aquaculture industry, research institutions and various organizations dealing with animal welfare issues. According to the legislations, the fish must be stunned before or at the same time as they are killed and remain unconscious until deat...

  7. Copepods enhance nutritional status, growth and development in Atlantic cod (Gadus morhua L.) larvae – can we identify the underlying factors?

    OpenAIRE

    Ørjan Karlsen; Terje van der Meeren; Ivar Rønnestad; Anders Mangor-Jensen; Galloway, Trina F.; Elin Kjørsvik; Kristin Hamre

    2015-01-01

    The current commercial production protocols for Atlantic cod depend on enriched rotifers and Artemia during first-feeding, but development and growth remain inferior to fish fed natural zooplankton. Two experiments were conducted in order to identify the underlying factors for this phenomenon. In the first experiment (Exp-1), groups of cod larvae were fed either (a) natural zooplankton, mainly copepods, increasing the size of prey as the larvae grew or (b) enriched rotifers followed by Artemi...

  8. Large scale distribution of dioxins, PCBs, heavy metals, PAH-metabolites and radionuclides in cod (Gadus morhua) from the North Atlantic and its adjacent seas.

    Science.gov (United States)

    Karl, Horst; Kammann, Ulrike; Aust, Marc-Oliver; Manthey-Karl, Monika; Lüth, Anja; Kanisch, Günter

    2016-04-01

    Regarding cod as sea food for human consumption and as bio indicator of the marine eco system, this study is the first approach to combine the analysis of organic and inorganic contaminants and radionuclides in cod muscle as well as PCDD/Fs and dl-PCBs in its livers from the same fishing areas. Concentrations of 1-hydroxypyrene, PCDD/Fs, PCBs, cesium-137 (Cs-137), cadmium and lead were determined in individual or pooled samples over a wide geographic area, including Greenland Seas, Barents Sea, North and Baltic Sea. Highest concentrations were found in samples from the Baltic Sea, lowest in the pristine areas of the Barents Sea and Greenland. Levels of contaminants in cod muscle were found to be far below the established EU maximum levels (ML), regardless of which fishing grounds. In contrast to this, most cod liver samples from the North and Baltic Sea showed PCDD/F and PCB contents exceeding the ML. In addition, new background assessment criteria (BAC) for 1-hydroxypyrene in cod of 4.6 ng mL(-1) bile and for Cs-137 a BAC of 0.16 Bq kg(-1) wet weight are proposed to be included in the European Marine Strategy Framework Directive for cod from the Northeast Atlantic. PMID:26874057

  9. Climate induced temperature effects on growth performance, fecundity and recruitment in marine fish: developing a hypothesis for cause and effect relationships in Atlantic cod ( Gadus morhua) and common eelpout ( Zoarces viviparus)

    Science.gov (United States)

    Pörtner, H. O.; Berdal, B.; Blust, R.; Brix, O.; Colosimo, A.; De Wachter, B.; Giuliani, A.; Johansen, T.; Fischer, T.; Knust, R.; Lannig, G.; Naevdal, G.; Nedenes, A.; Nyhammer, G.; Sartoris, F. J.; Serendero, I.; Sirabella, P.; Thorkildsen, S.; Zakhartsev, M.

    2001-12-01

    Effects of global warming on animal distribution and performance become visible in many marine ecosystems. The present study was designed to develop a concept for a cause and effect understanding with respect to temperature changes and to explain ecological findings based on physiological processes. The concept is based on a wide comparison of invertebrate and fish species with a special focus on recent data obtained in two model species of fish. These fish species are both characterized by northern and southern distribution limits in the North Atlantic: eelpout ( Zoarces viviparus), as a typical non-migrating inhabitant of the coastal zone and the cod ( Gadus morhua), as a typical inhabitant of the continental shelf with a high importance for fisheries. Mathematical modelling demonstrates a clear significant correlation between climate induced temperature fluctuations and the recruitment of cod stocks. Growth performance in cod is optimal at temperatures close to 10°C, regardless of the population investigated in a latitudinal cline. However, temperature specific growth rates decrease at higher latitudes. Also, fecundity is less in White Sea than in North and Baltic Sea cod or eelpout populations. These findings suggest that a cold-induced shift in energy budget occurs which is unfavorable for growth performance and fecundity. Thermal tolerance limits shift depending on latitude and are characterized by oxygen limitation at both low or high temperatures. Oxygen supply to tissues is optimized at low temperature by a shift in hemoglobin isoforms and oxygen binding properties to lower affinities and higher unloading potential. Protective stimulation of heat shock protein synthesis was not observed. According to a recent model of thermal tolerance the downward shift of tolerance limits during cold adaptation is associated with rising mitochondrial densities and, thus, aerobic capacity and performance in the cold, especially in eurythermal species. At the same time

  10. A baseline study of levels of mercury, arsenic, cadmium and lead in Northeast Arctic cod (Gadus morhua) from different parts of the Barents Sea

    International Nuclear Information System (INIS)

    Highlights: ► Highest concentration of Hg was found in the western part of the Barents Sea. ► The Hg concentrations were well below the maximum level of 0.5 mg kg−1 ► Arsenic concentrations varied greatly ranging from 0.3 to 170 mg kg−1 ww. ► Shrimp seems to be the most important prey for cod with high concentration of As. - Abstract: This study is one of several baseline studies that will provide basic and reliable information about the content of undesirable substances in important species of fish caught in Norwegian waters. Concentrations of metals in the muscle and liver of more than 800 Northeast Arctic cod caught at 32 sites in the Barents Sea are reported. The highest concentration of both mercury in the muscle and cadmium in the liver was found in cod caught in the western part of the Barents Sea, while the highest concentration of total arsenic was found in cod from the eastern part. The arsenic concentrations varied greatly among individual fish, ranging from 0.3 to 170 mg kg−1 wet weight in the muscle. Such high levels of total arsenic have never previously been reported in any fish, and the primary factor for these high concentrations is likely to be the shrimp in the cod diet

  11. Discrimination between weaned and unweaned Atlantic cod (Gadus morhua in capture-based aquaculture (CBA by X-ray imaging and radio-frequency metal detector.

    Directory of Open Access Journals (Sweden)

    Ekrem Misimi

    Full Text Available The aim of this study was to investigate the feasibility of two detection methods for use in discrimination and sorting of adult Atlantic cod (about 2 kg in the small scale capture-based aquaculture (CBA. Presently, there is no established method for discrimination of weaned and unweaned cod in CBA. Generally, 60-70% of the wild-caught cod in the CBA are weaned into commercial dry feed. To increase profitability for the fish farmers, unweaned cod must be separated from the stock, meaning the fish must be sorted into two groups - unweaned and weaned from moist feed. The challenges with handling of large numbers of fish in cages, defined the limits of the applied technology. As a result, a working model was established, focusing on implementing different marking materials added to the fish feed, and different technology for detecting the feed presence in the fish gut. X-ray imaging in two modes (planar and dual energy band and sensitive radio-frequency metal detection were the detection methods that were chosen for the investigations. Both methods were tested in laboratory conditions using dead fish with marked feed inserted into the gut cavity. In particular, the sensitive radio-frequency metal detection method with carbonyl powder showed very promising results in detection of marked feed. Results show also that Dual energy band X-ray imaging may have potential for prediction of fat content in the feed. Based on the investigations it can be concluded that both X-ray imaging and sensitive radio-frequency metal detector technology have the potential for detecting cod having consumed marked feed. These are all technologies that may be adapted to large scale handling of fish from fish cages. Thus, it may be possible to discriminate between unweaned and weaned cod in a large scale grading situation. Based on the results of this study, a suggestion for evaluation of concept for in-situ sorting system is presented.

  12. Effects of on-board storage and electrical stunning of wild cod (Gadus morhua) and haddock (Melanogrammus aeglefinus) on brain and heart activity

    NARCIS (Netherlands)

    Lambooij, E.; Digre, H.; Reimert, H.G.M.; Aursand, I.G.; Grimso, L.; Vis, van de J.W.

    2012-01-01

    Cod and haddock captured with commercial trawling gear were taken immediately after landing on deck to on-board storage in dry bins for measuring brain and heart activity, and behaviour. Other groups were first stored in holding tanks and then electrically stunned with a prototype "dry stunner". For

  13. 1H NMR metabolic profiling of cod (Gadus morhua larvae: potential effects of temperature and diet composition during early developmental stages

    Directory of Open Access Journals (Sweden)

    Matilde Skogen Chauton

    2015-12-01

    Full Text Available Marine aquaculture offers a great source of protein for the increasing human population, and farming of, for example, Atlantic salmon is a global industry. Atlantic cod farming however, is an example of a promising industry where the potential is not yet realized. Research has revealed that a major bottleneck to successful farming of cod is poor quality of the larvae and juveniles. A large research program was designed to increase our understanding of how environmental factors such as temperature and nutrition affects cod larvae development. Data on larvae growth and development were used together with nuclear magnetic resonance. The NMR data indicated that the temperature influenced the metabolome of the larvae; differences were related to osmolytes such as betaine/TMAO, the amino acid taurine, and creatine and lactate which reflect muscle activity. The larvae were fed Artemia from stage 2, and this was probably reflected in a high taurine content of older larvae. Larvae fed with copepods in the nutrition experiment also displayed a high taurine content, together with higher creatine and betaine/TMAO content. Data on the cod larvae metabolome should be coupled to data on gene expression, in order to identify events which are regulated on the genetic level versus regulation resulting from temperature or nutrition during development, to fully understand how the environment affects larval development.

  14. A comparative analysis of legislated and modified Baltic Sea trawlcodends for simultaneously improving the size selection of cod (Gadus morhua) and plaice (Pleuronectes platessa)

    DEFF Research Database (Denmark)

    Wienbeck, Harald; Herrmann, Bent; Feekings, Jordan P.;

    2014-01-01

    in conjunc-tion with the currently legislated codends; Bacoma and T90. The most favourable selective propertieswith regard to simultaneously improving the selectivity for round and flatfish, considering the currentminimum landing sizes (MLS) for cod (38 cm) and plaice (25 cm) in the Baltic Sea and the fish...

  15. A review of the evidence for genetic structure of cod ( Gadus morhua ) populations in the NW Atlantic and population affinities of larval cod off Newfoundland and the Gulf of St. Lawrence

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Taggart, C.T.; Cook, D.

    NW Atlantic. Three case studies illustrate genetic heterogeneity between cod populations at the meso- and large- scales of coastal embayments and offshore banks and at the small-scale of oceanographic features. Our results generally highlight the importance of combining genetic with physiological...

  16. Copepods enhance nutritional status, growth and development in Atlantic cod (Gadus morhua L. larvae — can we identify the underlying factors?

    Directory of Open Access Journals (Sweden)

    Ørjan Karlsen

    2015-05-01

    Full Text Available The current commercial production protocols for Atlantic cod depend on enriched rotifers and Artemia during first-feeding, but development and growth remain inferior to fish fed natural zooplankton. Two experiments were conducted in order to identify the underlying factors for this phenomenon. In the first experiment (Exp-1, groups of cod larvae were fed either (a natural zooplankton, mainly copepods, increasing the size of prey as the larvae grew or (b enriched rotifers followed by Artemia (the intensive group. In the second experiment (Exp-2, two groups of larvae were fed as in Exp-1, while a third group was fed copepod nauplii (approximately the size of rotifers throughout the larval stage. In both experiments, growth was not significantly different between the groups during the first three weeks after hatching, but from the last part of the rotifer feeding period and onwards, the growth of the larvae fed copepods was higher than that of the intensive group. In Exp-2, the growth was similar between the two copepod groups during the expeimental period, indicating that nutrient composition, not prey size caused the better growth on copepods. Analyses of the prey showed that total fatty acid composition and the ratio of phospholipids to total lipids was slightly different in the prey organisms, and that protein, taurine, astaxanthin and zinc were lower on a dry weight basis in rotifers than in copepods. Other measured nutrients as DHA, all analysed vitamins, manganese, copper and selenium were similar or higher in the rotifers. When compared to the present knowledge on nutrient requirements, protein and taurine appeared to be the most likely limiting nutrients for growth in cod larvae fed rotifers and Artemia. Larvae fed rotifers/Artemia had a higher whole body lipid content than larvae fed copepods at the end of the experiment (stage 5 after the fish had been fed the same formulated diet for approximately 2 weeks.

  17. Model-supported estimation of mortality rates in Baltic cod (Gadus morhua callarias L. larvae: the varying impact of 'critical periods'

    Directory of Open Access Journals (Sweden)

    Hinrichsen Hans-Harald

    2001-11-01

    Full Text Available Abstract Background Changes in the survival-rate during the larval phase may strongly influence the recruitment level in marine fish species. During the larval phase different 'critical periods' are discussed, e.g. the hatching period and the first-feeding period. No such information was available for the Baltic cod stock, a commercially important stock showing reproduction failure during the last years. We calculated field-based mortality rates for larval Baltic cod during these phases using basin-wide abundance estimates from two consecutive surveys. Survey information was corrected by three dimensional hydrodynamic model runs. Results The corrections applied for transport were of variable impact, depending on the prevailing circulation patterns. Especially at high wind forcing scenarios, abundance estimates have the potential to be biased without accounting for transport processes. In May 1988 mortality between hatch and first feeding amounted to approximately 20% per day. Mortality rates during the onset of feeding were considerably lower with only 7% per day. In August 1991 the situation was vice versa: Extremely low mortality rates of 0.08% per day were calculated between hatch and first feeding, while the period between the onset of feeding to the state of an established feeder was more critical with mortality rates of 22% per day. Conclusions Mortality rates during the different proposed 'critical periods' were found to be highly variable. Survival rates of Baltic cod are not only influenced by a single 'critical period', but can be limited at different points during the larval phase, depending on several biotic and abiotic factors.

  18. Response of branchial Na(+)/K(+) ATPase to changes in ambient temperature in Atlantic cod (Gadus morhua) and whiting (Merlangius merlangus).

    Science.gov (United States)

    Michael, Katharina; Koschnick, Nils; Pörtner, Hans-O; Lucassen, Magnus

    2016-05-01

    The maintenance of ion and pH homeostasis despite changes in ambient temperature is crucial for ectothermic organisms. Thermal sensitivity of Na(+)/K(+) ATPase mRNA expression, protein expression and activity was determined in gills of North Sea cod (NC) and Northeastern Arctic cod (NEAC), acclimated for 6 weeks at 4 and 10 °C and compared to field samples of North Sea cod (sNC), acclimatized to early spring (4 °C) and summer (18 °C) conditions. The same analyses were conducted in gills of the confamiliar whiting, acclimated at 4 and 10 °C. Branchial Na(+)/K(+) ATPase capacities remained uncompensated at functional and protein levels in NC and NEAC at both acclimation temperatures. Na(+)/K(+) ATPase mRNA expression in NEAC acclimated at 10 °C was about twofold higher compared to NC, indicating some population-specific differentiation at this level. Lower Na(+)/K(+) ATPase capacities in gills of warm-acclimatized sNC at common assay temperatures indicate thermal compensation between seasonal extremes, and post-translational modifications contributed to this mitigation at high assay temperature. Together, cod compensates Na(+)/K(+) ATPase capacities on the warm edge of the thermal window and below 4 °C, respectively. In contrast, whiting Na(+)/K(+) ATPase capacities were cold compensated at 4 °C, supported by 1.5-fold higher mRNA and protein expression. Besides, capacities were lower in whiting compared to NC and NEAC at optimum temperature, which may be advantageous in terms of reduced maintenance cost, but at temperatures ≤4 °C, compensation may represent an energy trade-off to maintain homeostasis. The species-specific response of gadid Na(+)/K(+) ATPase indicates certain threshold temperatures beyond which compensation of the pump is elicited, possibly related to the different biogeography of these species. PMID:26922791

  19. The Ontogeny and Brain Distribution Dynamics of the Appetite Regulators NPY, CART and pOX in Larval Atlantic Cod (Gadus morhua L.).

    Science.gov (United States)

    Le, Hoang T M D; Angotzi, Anna Rita; Ebbesson, Lars O E; Karlsen, Ørjan; Rønnestad, Ivar

    2016-01-01

    Similar to many marine teleost species, Atlantic cod undergo remarkable physiological changes during the early life stages with concurrent and profound changes in feeding biology and ecology. In contrast to the digestive system, very little is known about the ontogeny and the localization of the centers that control appetite and feed ingestion in the developing brain of fish. We examined the expression patterns of three appetite regulating factors (orexigenic: neuropeptide Y, NPY; prepro-orexin, pOX and anorexigenic: cocaine- and amphetamine-regulated transcript, CART) in discrete brain regions of developing Atlantic cod using chromogenic and double fluorescent in situ hybridization. Differential temporal and spatial expression patterns for each appetite regulator were found from first feeding (4 days post hatch; dph) to juvenile stage (76 dph). Neurons expressing NPY mRNA were detected in the telencephalon (highest expression), diencephalon, and optic tectum from 4 dph onward. CART mRNA expression had a wider distribution along the anterior-posterior brain axis, including both telencephalon and diencephalon from 4 dph. From 46 dph, CART transcripts were also detected in the olfactory bulb, region of the nucleus of medial longitudinal fascicle, optic tectum and midbrain tegmentum. At 4 and 20 dph, pOX mRNA expression was exclusively found in the preoptic region, but extended to the hypothalamus at 46 and 76 dph. Co-expression of both CART and pOX genes were also observed in several hypothalamic neurons throughout larval development. Our results show that both orexigenic and anorexigenic factors are present in the telencephalon, diencephalon and mesencephalon in cod larvae. The telencephalon mostly contains key factors of hunger control (NPY), while the diencephalon, and particularly the hypothalamus may have a more complex role in modulating the multifunctional control of appetite in this species. As the larvae develop, the overall progression in temporal and

  20. Antioxidant activity of Cod (Gadus morhua) protein hydrolysates: in vitro assays and evaluation in 5% fish oil-in-water emulsion.

    Science.gov (United States)

    Farvin, K H Sabeena; Lystbæk Andersen, Lisa; Hauch Nielsen, Henrik; Jacobsen, Charlotte; Jakobsen, Greta; Johansson, Inez; Jessen, Flemming

    2014-04-15

    Cod protein hydrolysates were fractionated according to the molecular mass into three fractions of >5 kDa, 3-5 kDa and hydrolysates and the fractions were investigated, both in in vitro assays (DPPH radical scavenging activity, reducing power, Fe²⁺ chelating activity and inhibition of lipid oxidation in liposome model system), and in 5% fish oil-in-water emulsions. The hydrolysate, were able to protect fish oil against oxidation in an iron induced oxidation system. However, none of the peptide fractions were effective in preventing tocopherol loss and showed no tocopherol sparing property. Volatile oxidation products showed an interaction between the aldehydes and the protein/peptides added in the emulsions, and this needs further investigation. PMID:24295714

  1. Heat-shock responsive genes identified and validated in Atlantic cod (Gadus morhua) liver, head kidney and skeletal muscle using genomic techniques

    OpenAIRE

    Kimball Jennifer; Hubert Sophie; Johnson Stewart C; Afonso Luis OB; Gamperl A Kurt; Hori Tiago S; Bowman Sharen; Rise Matthew L

    2010-01-01

    Abstract Background Daily and seasonal changes in temperature are challenges that fish within aquaculture settings cannot completely avoid, and are known to elicit complex organismal and cellular stress responses. We conducted a large-scale gene discovery and transcript expression study in order to better understand the genes that are potentially involved in the physiological and cellular aspects of stress caused by heat-shock. We used suppression subtractive hybridization (SSH) cDNA library ...

  2. Development of new concepts for escape windows to minimise cod catches in Norway lobster fisheries

    DEFF Research Database (Denmark)

    Madsen, Niels; Frandsen, Rikke; Holst, René;

    2010-01-01

    Gear selectivity with regard to cod (Gadus morhua) needs to be improved in the Kattegat and Skagerrak Norway lobster (Nephrops norvegicus) fishery. One way to achieve this goal is to improve the selectivity of an escape window (henceforth window) in the gear. Our gear development focused...... 300 mm window is placed at the top section at about 3–6 m from the codline. Acoustic release technology was used to avoid catch loss during gear retrieval. Sea trials were conducted in the Skagerrak and Kattegat from a commercial trawler. The sorting box yielded a high reduction of the cod catch, but...... no improvement was observed for cod that came into contact with the window after reducing the distance from the window to the codline. The sorting box also showed a high reduction of flatfish and other roundfish species. The retention of Norway lobster above minimum landing size in the sorting box...

  3. Fisheries. Population of origin of Atlantic cod.

    Science.gov (United States)

    Nielsen, E E; Hansen, M M; Schmidt, C; Meldrup, D; Grønkjaer, P

    2001-09-20

    Most of the world's cod (Gadus morhua) fisheries are now tightly regulated or closed altogether. Being able to link individual fish to their population of origin would assist enormously in policing regulations and in identifying poachers. Here we show that microsatellite genetic markers can be used to assign individual cod from three different populations in the northeastern Atlantic Ocean to their population of origin. PMID:11565021

  4. Infection of North Sea cod (Gadus morhua L.) postlarvae and juveniles with the parasites Hysterothylacium aduncum Rudolphi and Caligus sp

    DEFF Research Database (Denmark)

    Mehrdana, F.; Bahlool, Q. M.; Skovgaard, A.; Kuhn, J. A.; Kania, P. W.; Munk, Peter; Buchmann, K.

    size of infected (1-2 parasites per fish) and uninfected fish sizes in various age groups. Ageing was performed by otolith readings, and it was indicated that cod younger than 44 days were negatively affected by infection whereas cod older than 44 days tolerated this low parasite burden....... fish are more vulnerable to infection compared to older age groups, but merely few investigations on parasitic infections in young cod are available. We have therefore performed a parasitological investigation of a total of 3361 specimens of Atlantic cod post larvae and juveniles sampled from the North...

  5. AFSC/REFM: Pacific cod genetics in the Aleutian Islands 2004-2007

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Landscape genetics of Pacific cod Gadus macrocephalus within the Bering Sea and Aleutian Islands (BSAI) management area of Alaska was examined in samples from nine...

  6. Recovery in eastern Baltic cod: is increased recruitment caused by decreased predation on early life stages?

    DEFF Research Database (Denmark)

    Neumann, Viola; Köster, Fritz; Schaber, M.; Eero, Margit

    2014-01-01

    Cod (Gadus morhua) recruitment in the eastern Baltic Sea is influenced by predation on early life stages by sprat (Sprattus sprattus) and herring (Clupea harengus), which is considered as one of the mechanisms preventing cod recovery in the 1990s. In the light of improved cod recruitment in the...

  7. Potential Use of Atlantic Cod Trypsin in Biomedicine

    OpenAIRE

    Ágústa Gudmundsdóttir; Hilmar Hilmarsson; Bjarki Stefansson

    2013-01-01

    Surface proteins of viruses and bacteria used for cell attachment and invasion are candidates for degradation by proteases. Trypsin from Atlantic cod (Gadus morhua) was previously demonstrated to have efficacy against influenza viruses in vitro and on skin. In this paper, cod trypsin is shown to be 3–12 times more effective in degrading large native proteins than its mesophilic analogue, bovine trypsin. This is in agreement with previous findings where cod trypsin was found to be the most act...

  8. Characterization of the fatty acyl elongase (elovl) gene family, and hepatic elovl and delta-6 fatty acyl desaturase transcript expression and fatty acid responses to diets containing camelina oil in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Xue, Xi; Feng, Charles Y; Hixson, Stefanie M; Johnstone, Kim; Anderson, Derek M; Parrish, Christopher C; Rise, Matthew L

    2014-09-01

    For aquaculture to become sustainable, there is a need to substitute fish oil [FO, rich in ω3 long chain polyunsaturated fatty acids (LC-PUFA) such as 20:5ω3 (EPA) and 22:6ω3 (DHA)] in aquafeed with plant oils such as camelina oil [CO, rich in C18 PUFA such as 18:3ω3 (ALA) and 18:2ω6 (LNA)]. The LC-PUFA are essential components in fish diets for maintaining optimal health, physiology and growth. However, most marine fish including Atlantic cod are inefficient at producing LC-PUFA from shorter chain precursors. Since elovl genes encode enzymes that play key roles in fatty acid biosynthesis, we hypothesized that they may be involved in Atlantic cod responses to diets rich in 18:3ω3 and 18:2ω6. Ten members of the cod elovl gene family were characterized at the mRNA level. RT-PCR was used to study constitutive expression of elovl transcripts in fifteen tissues. Some transcripts (e.g. elovl5) were ubiquitously expressed, while others had tissue-specific expression (e.g. elovl4a in brain and eye). Cod fed a CO-containing diet (100% CO replacement of FO and including solvent-extracted fish meal) had significantly lower weight gain, with significant up-regulation of elovl5 and fadsd6 transcripts in the liver as shown by QPCR analysis, compared with cod on a FO control diet after a 13-week trial. Multivariate statistical analyses (SIMPER and PCA) indicated that high 18:3ω3 and/or low ω3 LC-PUFA levels in the liver were associated with the up-regulation of elovl5 and fadsd6, which are involved in LC-PUFA biosynthesis in cod. PMID:24970595

  9. Substitution of fish oil with camelina oil and inclusion of camelina meal in diets fed to Atlantic cod (Gadus morhua) and their effects on growth, tissue lipid classes, and fatty acids.

    Science.gov (United States)

    Hixson, S M; Parrish, C C

    2014-03-01

    Developing a commercially relevant Atlantic cod aquaculture industry will require improvements in feed sustainability. Camelina oil and meal are potential replacements of fish oil and fish meal in aquaculture feeds. Camelina oil is high in 18:3ω3 (30%), with an ω3/ω6 ratio > 1. Camelina meal has a considerable crude protein level (38%), which includes significant amounts of methionine and phenylalanine. Four diets were tested; each diet was fed to triplicate tanks (3 tanks per diet) of Atlantic cod (14.4 g/fish; 70 fish per tank) for 13 wk. The diets included a fish oil/fish meal control (FO) and three diets which replaced 100% of fish oil with camelina oil: one diet contained fish meal (100CO), another solvent extracted fish meal (100COSEFM), and another had fish meal partially reduced by 15% inclusion of camelina meal (100CO15CM). Growth was measured (length and weight) and tissue samples were collected for lipid analysis (muscle, liver, brain, gut, spleen, skin, and carcass) at wk 0 (before feeding the experimental diet) and at wk 13. Cod fed camelina oil had a lower (P camelina oil, plus solvent extracted fish meal had an overarching effect on the entire fatty acid profile of the whole animal. Fatty acid mass balance calculations indicated that cod fed 100COSEFM elongated 13% of 18:3ω3 to 20:3ω3 and oxidized the remaining 87%, whereas cod fed fish oil showed a much lower (P camelina oil caused some fatty acid elongation, but little desaturation. Energy budget estimates indicated that cod fed 100COSEFM deposited the most energy throughout the trial (60 kJ/fish; P = 0.019), mostly in the liver (90%). Excess camelina lipids were not necessarily utilized for energy, which likely impacted growth. Feeding 100% camelina oil to Atlantic cod impacted growth and lipid and fatty acid composition; however, additional removal of fish oil from fish meal caused the greatest change in cod lipid composition and utilization. PMID:24496831

  10. The parasitic copepod Lernaeocera branchialis negatively affects cardiorespiratory function in Gadus morhua

    DEFF Research Database (Denmark)

    Behrens, Jane W.; Seth, H.; Axelsson, M.; Buchmann, K.

    2014-01-01

    The parasitic copepod Lernaeocera branchialis had a negative effect on cardiorespiratory function in Atlantic cod Gadus morhua such that it caused pronounced cardiac dysfunction with irregular rhythm and reduced stroke amplitude compared with uninfected fish. In addition, parasite infection...... depressed the postprandial cardiac output and oxygen consumption...

  11. Modeling early life history of cod

    OpenAIRE

    Kristiansen, Trond

    2007-01-01

    Newly hatched Atlantic cod (Gadus morhua) larvae face an uncertain future when they first enter their marine pelagic habitat. Prior to complete yolk absorption, the larvae will have to find food. This process includes the visual encounter, pursuit and attack, and capture and digestion of the prey item for utilization to meet energetic demands for metabolism and growth. However, food is not always easy to find and it is essential for larval survival that they encounter habitats ...

  12. Evaluation of the impact of camelina oil-containing diets on the expression of genes involved in the innate anti-viral immune response in Atlantic cod (Gadus morhua).

    Science.gov (United States)

    Booman, Marije; Xu, Qingheng; Rise, Matthew L

    2014-11-01

    To improve sustainability of aquaculture, especially for carnivorous species like Atlantic cod, replacement of fish oil-based diets with vegetable oil-based diets has been studied. The use of vegetable oil in fish feeds can significantly change the fatty acid composition of fish tissues, and given the importance of fatty acids in inflammation and immunity, this change could potentially impact the immune response and health of the fish. The oilseed Camelina sativa is a promising source for this vegetable oil, because of the high oil content of its seeds (40%), a higher n-3 fatty acid content than most other oilseeds, and a high amount of γ-tocopherol. This study aims to investigate the effect of the replacement of dietary fish oil with oil from Camelina sativa on the immune response of Atlantic cod, as measured by the gene expression in spleen. Juvenile cod were fed on a fish oil-based diet (FO) or one of two diets in which camelina oil replaced 40% or 80% of fish oil (40CO and 80CO respectively) for 67 days, after which they were injected with either the viral mimic polyriboinosinic polyribocytidylic acid (pIC), or phosphate-buffered saline (PBS) as a control. Microarray analysis was used to determine the effect of the diet on the basal spleen transcriptome (pre-injection), and on the response to pIC (24 h post-injection). No marked differences in the spleen transcriptome were found between the three diets, either before or after injection with pIC. All fish, regardless of diet, showed a strong anti-viral response 24 h after pIC injection, with more than 500 genes having a significant difference of expression of 2-fold or higher compared to the PBS-injected fish for the FO, 40CO and 80CO diets. Gene Ontology annotation analysis of the three pIC-responsive gene lists indicated they were highly similar, and that the term 'immune system process' was significantly enriched in the pIC-responsive gene lists for all three diets. QPCR analysis for 5 genes with a known

  13. Regime shifts, resilience and recovery of a cod stock

    DEFF Research Database (Denmark)

    Lindegren, Martin; Diekmann, Rabea; Möllmann, Christian

    2010-01-01

    In the North and Baltic seas Atlantic cod Gadus morhua stocks collapsed as part or one of the major factors inducing large-scale ecosystem regime shifts. Determining the relative contribution of overfishing and climate variability in causing these shifts has proven difficult. While facing similar...

  14. Observations of cod behaviour reveal insights into the function and properties of the swimbladder under pressure

    OpenAIRE

    van der Kooij, Jeroen; Righton, David; Michalsen, Kathrine; Thorsteinsson, Vilhjalmur; Svedäng, Henrik; Neat, Francis

    2006-01-01

    Atlantic cod (Gadus morhua L.) is a highly adaptive boreal species with a broad distribution through different ecosystems in the North Atlantic. Diet, environmental factors and population dynamics vary enormously throughout this range, and behaviours are therefore extremely plastic. However, the behaviour of cod will always be constrained by physiology, be it temperature tolerance, swimming speeds or buoyancy control. Cod, like other gadoids, are physoclists, i.e. they have ...

  15. Bay-scale population structure in coastal Atlantic cod in Labrador and Newfoundland, Canada

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Wroblewski, J.S.; Taggart, C.T.; Smedbol, R.K.; Cook, D.; Goddard, S.V.

    2000-01-01

    Polymorphisms at five microsatellite DNA loci provide evidence that Atlantic cod Gadus morhua inhabiting Gilbert Bay, Labrador are genetically distinguishable from offshore cod on the north- east Newfoundland shelf and from inshore cod in Trinity Bay, Newfoundland. Antifreeze activity in the blood...... population structure suggest that important barriers to gene flow exist among five components that include two inshore (Gilbert and Trinity Bay) and three offshore cod aggregations on the north-east Newfoundland Shelf and the Grand Bank. D-A and D-SW estimates of genetic distance that involve Gilbert Bay cod...

  16. Unraveling the Evolution of the Atlantic Cod’s (Gadus morhua L.) Alternative Immune Strategy

    OpenAIRE

    2013-01-01

    Genes encoding the major histocompatibility complex (MHC) have been thought to play a vital role in the adaptive immune system in all vertebrates. The discovery that Atlantic cod (Gadus morhua) has lost important components of the MHC II pathway, accompanied by an unusually high number of MHC I genes, shed new light on the evolution and plasticity of the immune system of teleosts as well as in higher vertebrates. The overall aim of this study was to further investigate the highly expanded rep...

  17. Developing Baltic cod recruitment models I : Resolving spatial and temporal dynamics of spawning stock and recruitment for cod, herring, and sprat

    DEFF Research Database (Denmark)

    Köster, Fritz; Möllmann, C.; Neuenfeldt, Stefan;

    2001-01-01

    The Baltic Sea comprises a heterogeneous oceanographic environment influencing the spatial and temporal potential for reproductive success of cod (Gadus morhua) and sprat (Sprattus sprattus) in the different spawning basins. Hence, to quantify stock and recruitment dynamics, it is necessary to......-disaggregated multispecies virtual population analyses (MSVPA) were performed for interacting species cod, herring (Clupea harengus), and sprat in the different subdivisions of the Central Baltic. The MSVPA runs revealed distinct spatial trends in population abundance, spawning biomass, recruitment, and predation...

  18. Retention of Coastal Cod Eggs in a Fjord Caused by Interactions between Egg Buoyancy and Circulation Pattern

    OpenAIRE

    Myksvoll, Mari Skuggedal; Sundby, Svein; Ådlandsvik, Bjørn; Frode B Vikebø

    2011-01-01

    Norwegian coastal cod form a stationary population of Atlantic cod Gadus morhua consisting of several genetically separated subpopulations. A small-scale differentiation in marine populations with pelagic eggs and larvae is made possible by local retention of early life stages in coastal environments. A numerical model was used to simulate the circulation in a fjord system in northern Norway over 2 years with different river runoff patterns. The dispersal of cod eggs was calculated with a par...

  19. Eastern Baltic cod in distress: biological changes and challenges for stock assessment

    DEFF Research Database (Denmark)

    Eero, Margit; Hjelm, Joakim; Behrens, Jane;

    2015-01-01

    The eastern Baltic (EB) cod (Gadus morhua) stock was depleted and overexploited for decades until the mid-2000s, when fishing mortality rapidly declined and biomass started to increase, as shown by stock assessments. These positive developments were partly assigned to effective management measures...

  20. Transport of North Sea cod larvae into the Skagerrak coastal populations.

    OpenAIRE

    Knutsen, Halvor; André, Carl; Jorde, Per Erik; Skogen, Morten D.; Thuróczy, Emma; Stenseth, Nils Chr.

    2004-01-01

    The Atlantic cod (Gadus morhua) is economically one of the world's most important marine species--a species presently suffering from heavy overexploitation throughout its range of distribution. Although not fully understood, the Atlantic cod is believed to be structured into populations in a rather complex manner, whereby both highly migratory and more confined ocean-spawning stocks coexist with stationary coastal populations. Owing to the complex population structure, little is presently kno...

  1. Long Distance Linkage Disequilibrium and Limited Hybridization Suggest Cryptic Speciation in Atlantic Cod

    OpenAIRE

    Bradbury, Ian R.; Sharen Bowman; Tudor Borza; Snelgrove, Paul V. R.; Hutchings, Jeffrey A; Berg, Paul R.; Naiara Rodríguez-Ezpeleta; Jackie Lighten; Ruzzante, Daniel E.; Christopher Taggart; Paul Bentzen

    2014-01-01

    Hybrid zones provide unprecedented opportunity for the study of the evolution of reproductive isolation, and the extent of hybridization across individuals and genomes can illuminate the degree of isolation. We examine patterns of interchromosomal linkage disequilibrium (ILD) and the presence of hybridization in Atlantic cod, Gadus morhua, in previously identified hybrid zones in the North Atlantic. Here, previously identified clinal loci were mapped to the cod genome with most (∼70%) occurri...

  2. The extracellular matrix of Gadus morhua muscle contains types III, V, VI and IV collagens in addition to type I

    DEFF Research Database (Denmark)

    Brüggemann, Dagmar Adeline; Lawson, M.A.

    2005-01-01

    Confocal microscopy and immuno‐histochemistry were used to examine collagens in the extracellular matrix of cod Gadus morhua swimming muscle. In addition to the well known presence of type I fibrous collagen, types III and VI were also found in the myocommata and the endomysium. The beaded collagen......, type VI, was found in the endomysium and the network forming collagen, type IV, was found in the basement membrane. This is the first report of type V collagen in cod muscle and of types II, IV and VI in the muscle of a teleost....

  3. Threshold-dependent climate effects and high mortality limit recruitment and recovery of the Kattegat cod

    DEFF Research Database (Denmark)

    Lindegren, Martin; Eero, Margit

    2013-01-01

    non-additive threshold models. In contrast to previous studies on recruitment dynamics of Kattegat cod Gadus morhua, we found that recruitment variability may be explained by a combination of the size of the spawning stock and external conditions (i.e. sea surface temperature and oxygen concentrations......Cod in the Kattegat is one of the most dramatic examples of stock collapse, where despite large management efforts, almost no signs of recovery have been observed. We investigate how multiple physical and biological factors could potentially influence recruitment and recovery of Kattegat cod, using...

  4. Farmed cod escapees and net-pen spawning left no clear genetic footprint in the local wild cod population

    Directory of Open Access Journals (Sweden)

    Rebekka Varne

    2015-11-01

    Full Text Available This study investigated a potential genetic introgression from farmed to wild cod Gadus morhua L. in the Trondheimsfjord, Norway. During the first 2 yr of operation of a cod farm in the inner part of the fjord, 2 large escape events and extensive pen spawning were reported. Analyses of 4 allozyme markers revealed no significant changes in allele frequencies between samples of wild cod before and after cod farming, although prominent allele frequency differences were demonstrated between wild and farmed samples. Analyses of 10 DNA markers showed a significant change between pre- and post-farming samples, due to contradictory allele frequency differences at Tch11, Pan I and Gmo132. Excluding those 3 markers due to null alleles (Tch11 and selection (Gmo132 and Pan I, the DNA markers paralleled the non-changed allele frequency signal from the allozymes. The topographies of the allozyme- and DNA-based dendrogram of the samples were congruent. Recaptures of tagged and released farmed cod indicated a seemingly random diffusion throughout the fjord and ended after approx. 6 mo. During an ongoing pen spawning, plankton net surveys sampling for cod eggs in the surroundings of the cod farm suggested the eggs originated from the farm. No larvae were present in the plankton samples. The apparent absence of introgression is explained relative to fitness and survival of pen-spawned larvae and adult escapees, and to a purging effect of the estuarine circulation of the Trondheimsfjord.

  5. Externally driven mortality of cod early life stages in the central Baltic: hydrography vs. predation

    DEFF Research Database (Denmark)

    Neumann, Viola; Köster, Fritz; Schaber, Matthias; Hinrichsen, Hans Harald; Eero, Margit; Temming, Axel

    Cod (Gadus morhua L.) recruitment success in the central Baltic Sea is influenced by various abiotic and biotic factors, which include ambient salinity and oxygen conditions as well as predation pressure on early life stages by planktivore clupeids, such as sprat (Sprattus sprattus) and herring...... (Clupea harengus). After a period of very low recruitment and stock size during the 1990s–early 2000s, the eastern Baltic cod stock exhibits signs of recovery, at least partly owing to several stronger year classes formed in recent years. In this paper we investigate whether or not changes in predation...... pressure by clupeids on the early life stages of cod could have enhanced cod recruitment in recent years. The analyses are based on a large dataset of stomach content of clupeids, cod egg abundances from ichthyoplankton surveys, and hydrographic measurements. We investigate temporal and spatial variability...

  6. Gender differences in health and aging of Atlantic cod subject to size selective fishery

    OpenAIRE

    Bethanie Carney Almroth; Mattias Sköld; Helen Nilsson Sköld

    2012-01-01

    Summary We have analyzed health and physiological aging parameters in male and female Atlantic cod, Gadus morhua, captured in Kattegat, Skagerrak and in Öresund. Gender differences were clearly evident in a number of variables. Males had longer liver telomeres and higher catalase activities than females, while females had higher superoxide dismutase activity, liver somatic index and condition factor. Effects of age were found for males where levels of the antioxidant glutathione and telome...

  7. Location of and post-mortem changes in some cytoskeletal proteins in pork and cod muscle

    DEFF Research Database (Denmark)

    Morrison, E.H.; Bremner, Allan; Purslow, P.P.

    2000-01-01

    The cytoskeletal proteins actin, nebulin, spectrin, desmin, vinculin and talin were labelled immunohistochemically in sections of muscle from commercially available pigs and cod (Gadus morhua) taken pre-rigor and from samples stored for several days. Actin, nebulin and spectrin gave similar...... and location of spectrin and vinculin in fish muscle and of the location of talin. The results are discussed in terms of muscle structure, function and post-mortem tenderisation. (C) 2000 Society of Chemical Industry....

  8. Cod Liver Oil

    Science.gov (United States)

    Cod liver oil can be obtained from eating fresh cod liver or by taking supplements. Cod liver oil is used for high cholesterol, high triglycerides, ... ear infections (otitis media). Some people put cod liver oil on their skin to speed wound healing. ...

  9. The effect of external dummy transmitters on oxygen consumption and performance of swimming Atlantic cod

    DEFF Research Database (Denmark)

    Steinhausen, M.F.; Andersen, Niels Gerner; Steffensen, J.F.

    2006-01-01

    Decreased critical swimming speed and increased oxygen consumption (Mo-2) was found for externally tagged Atlantic cod Gadus morhua swimming at a high speed of 0 center dot 9 body length (total length, L-Gamma) s(-1). No difference was found in the standard metabolic rate, indicating that the hig...... higher Mo-2 for tagged cod was due to drag force rather than increased costs to keep buoyancy. (c) 2006 The Authors Journal compilation (c) 2006 The Fisheries Society of the British Isles....

  10. Demography of coastal Atlantic cod in relation to the establishment of a marine protected area

    OpenAIRE

    Nordahl, Jan-Harald

    2012-01-01

    Use a mark-recapture approach to study the demography of Atlantic cod (Gadus morhua) in a small (1 km2) marine protected area (MPA) on the Norwegian Skagerrak coast. A total of 9713 Atlantic cod where tagged during 2005-2010. Inside the MPA, only hook and line fishing is allowed. Data are partly live capture-recaptures from the research fishing activity, and partly dead recoveries from commercial and recreational fishers. A high-reward system was applied to quantify the tag reporting rate fro...

  11. Cod avoidance by area regulations in Kattegat

    DEFF Research Database (Denmark)

    Eliasen, Søren Qvist

    2014-01-01

    regarded fair and the goals should be clear, not least when the descriptors of the Marine Strategy Framework Directive, which might be more intangible for the fishers, are part of the goal of the measures. If incentives created by the regulation are stable over at least a few years the fishers and fishers...... and temporary area closures in Kattegat. The third section discusses the lessons learned in the light of implementation of the discard ban. The fourth section sums up the lessons learned; Regional measures of implementation of the discard ban should include all vessels with quota in the region to be...

  12. A baseline study on levels of polychlorinated dibenzo-p-dioxins, polychlorinated dibenzofurans, non-ortho and mono-ortho PCBs, non-dioxin-like PCBs and polybrominated diphenyl ethers in Northeast Arctic cod (Gadus morhua) from different parts of the Barents Sea

    International Nuclear Information System (INIS)

    Highlights: • Livers of cod from the Barents Sea have been analysed for dioxins, PCBs and PBDEs. • The overall mean concentration of dioxins and DL-PCBs was 14.2 ng TEQWHO-2005/kg ww. • The concentrations of dioxins and DL-PCBs varied between 1.0 and 151 ng TEQ/kg ww. • 20% of the samples had concentrations higher than 20 ng TEQ/kg ww. • The highest concentrations of dioxins and PCB were found in samples from the east area of the Barents Sea. -- Abstract: This study is one of several baseline studies on commercially important Norwegian wild fish species that will provide information concerning metals and persistent organic pollutants (POPs) and food safety. The cod liver is a traditional food product in Norway and a potential source for POPs in the diet. The concentrations of dioxins and furans (PCDD/Fs), dioxin-like PCBs (DL-PCBs), non-dioxin-like PCBs (NDL-PCBs, PCB6) and polybrominated flame retardants (PBDEs) were determined in the liver of 784 individual Northeast Arctic cod caught at 32 positions in the Barents Sea in the period from 2009–2010. In addition, muscle samples from 30 individual cod were analysed for the same substances. The mean concentration of the sum of PCDD/Fs and DL-PCBs for all samples was 14.2 ng TEQwho-2005/kg ww with a variation between 1.0 and 151 ng TEQ/kg ww. The concentrations of POPs in the fillet samples were very low

  13. Suitability of otolith microchemistry for stock separation of Baltic cod

    DEFF Research Database (Denmark)

    Heidemann, F; Marohn, L; Hinrichsen, HH; Huwer, B; Hüssy, K; Klügel, A; Böttcher, U; Hanel, R

    2012-01-01

    Microchemical otolith analyses have been shown to provide valuable information on the life history, dispersal and stock characteristics of teleost fish. In the present study, the suitability of this technique for identifying the origin and distribution of Atlantic cod Gadus morhua L. from the...... Baltic Sea was examined using laser ablation-ICPMS. The capacity to distinguish individuals from different Baltic Sea stocks and from the adjacent North Sea stock based on incoporation of stock-specific elemental fingerprints along otolith growth axes was investigated. It was further tested if different...... origins led to spawning-site specific element concentrations in otolith cores. The results indicate that microchemical analyses of Baltic cod otoliths are applicable for differentiating individuals of different stocks. Analyses of similarities including 12 element/calcium ratios resulted in significant...

  14. Implications of mechanical deformation and formaldehyde preservation for the identification of stage-specific characteristics of Baltic cod eggs

    DEFF Research Database (Denmark)

    Geldmacher, A.; Wieland, Kai

    1999-01-01

    The identification of developmental stages in fish eggs from plankton samples is often complicated by deformation of the embryos due to mechanical stress during the sampling procedure and by dehydration during formaldehyde fixation. The effects of formaldehyde fixation and mechanical stress on...... Baltic cod eggs (Gadus morhua callarias L.) were examined separately by visually comparing the morphological features of treated vs. live eggs of identical ontogenetic age. Microphotographs were made concurrently for documentation. In stage IA eggs, mechanical treatment resulted in scattered blastodiscs...

  15. Cod reproductive ecology

    DEFF Research Database (Denmark)

    Røjbek, Maria

    is to investigate the variation in lipid content, EFA and antioxidants of female Baltic cod gonads and livers during the reproductive cycle (Paper II) and to examine whether there is a deficiency in lipid energy and dietary EFA that could explain the delayed spawning time observed in the Baltic cod (Paper III...... may impact lipid content and FAC in cod. High proportions of ARA, EPA and the antioxidant, astaxanthin, in S. Entomon, compared to 9 clupeids, render it a valuable constituent in the diet of Baltic cod. However, the abundance of S. Entomon has declined in recent decades in the Baltic. FAC of ovary...... time. However the spawning period is not influenced by different ARA levels and EPA/ARA ratios in farmed cod (Paper IV). Uptake of DHA, EPA and ARA into cod eggs from broodstock diet is highly efficient (Paper IV). Diet with low EPA/ARA ratio has significantly higher realized fecundity and eggs from...

  16. Impact of hypoxia on consumption of Baltic cod in a multispecies stock assessment context

    DEFF Research Database (Denmark)

    Teschner, E.C.; Kraus, G.; Neuenfeldt, Stefan;

    2010-01-01

    The Baltic Sea is characterised by a heterogeneous oceanographic environment. The deep water layers forming the habitat of Baltic cod (Gadus morhua callarias L.) are subjected to frequently occurring pronounced anoxic conditions. Adverse oxygen conditions result in physiological stress for...... organisms living under these conditions. For cod e.g. a direct relationship between oxygen availability and food intake with a decreasing ingestion rate at hypoxia could be revealed. In the present study, the effects of oxygen deficiency on consumption rates were investigated and how these translate to...... stock size estimates in multi-species models. Based on results from laboratory experiments, a model was fitted to evacuation rates at different oxygen levels and integrated into the existing consumption model for Baltic cod. Individual mean oxygen corrected consumption rates were 0.1–10.9% lower than...

  17. Genomic characterization of the Atlantic cod sex-locus.

    Science.gov (United States)

    Star, Bastiaan; Tørresen, Ole K; Nederbragt, Alexander J; Jakobsen, Kjetill S; Pampoulie, Christophe; Jentoft, Sissel

    2016-01-01

    A variety of sex determination mechanisms can be observed in evolutionary divergent teleosts. Sex determination is genetic in Atlantic cod (Gadus morhua), however the genomic location or size of its sex-locus is unknown. Here, we characterize the sex-locus of Atlantic cod using whole genome sequence (WGS) data of 227 wild-caught specimens. Analyzing more than 55 million polymorphic loci, we identify 166 loci that are associated with sex. These loci are located in six distinct regions on five different linkage groups (LG) in the genome. The largest of these regions, an approximately 55 Kb region on LG11, contains the majority of genotypes that segregate closely according to a XX-XY system. Genotypes in this region can be used genetically determine sex, whereas those in the other regions are inconsistently sex-linked. The identified region on LG11 and its surrounding genes have no clear sequence homology with genes or regulatory elements associated with sex-determination or differentiation in other species. The functionality of this sex-locus therefore remains unknown. The WGS strategy used here proved adequate for detecting the small regions associated with sex in this species. Our results highlight the evolutionary flexibility in genomic architecture underlying teleost sex-determination and allow practical applications to genetically sex Atlantic cod. PMID:27499266

  18. Feeding habits of Pacific cod larvae and juveniles in Mutsu Bay, Japan

    OpenAIRE

    Takatsu, Tetsuya; Nakatani, Toshikuni; MUTOH, Takashi; Takahashi, Toyomi

    1995-01-01

    The diets and prey widths of Pacific cod (Gadus macrocephalus) larvae and juveniles were examined in Mutsu Bay. In early March, 11 yolk-sac larvae were caught in midwater of the bay mouth. Five of 11 larvae captured had not opened their mouths, and the remaining six had not fed. Post-larvae ≤ 7mm in total length (TL) fed on copepod nauplii, particularly Pseudocalanus nauplii. Prey items of post-larvae >7mm TL were chiefly crustacean eggs, and Pseudocalanus spp. copepodites and adults. From Ap...

  19. Chitosan as an edible invisible film for quality preservation of herring and atlantic cod.

    Science.gov (United States)

    Jeon, You-Jin; Kamil, Janak Y V A; Shahidi, Fereidoon

    2002-08-28

    The effect of chitosan with different molecular weights as coatings for shelf-life extension of fresh fillets of Atlantic cod (Gadus morhua) and herring (Clupea harengus) was evaluated over a 12-day storage at refrigerated temperature (4 +/- 1 degrees C). Three chitosan preparations from snow crab (Chinoecetes opilio) processing wastes, differing in viscosities and molecular weights, were prepared; their apparent viscosities (360, 57, and 14 cP) depended on the deacetylation time (4, 10, and 20 h, respectively) of the chitin precursor. Upon coating with chitosans, a significant (p edible coating would enhance the quality of seafoods during storage. PMID:12188625

  20. Food safety of salt-cured cod products : effects of salt-curing, rehydration and thermal treatmenton survival, growth and invasiveness of Listeria spp.

    OpenAIRE

    Lorentzen, Grete

    2010-01-01

    Salt-cured and dried salt-cured (klipfish) cod (Gadus morhua L.) are highly appreciated. Salt fish and klipfish are mainly prepared by rehydration to lower the level of salt. The rehydrated cod can be used in several dishes and consumption of these products has been considered safe due to the high level of salt. The overall aim of the thesis was to study the food safety of salt-cured fish products using Listeria spp. as an indicator. Initially, we studied the survival of Listeria spp. in m...

  1. Thawed chilled Barents Sea cod fillets in modified atmosphere packaging-application of multivariate data analysis to select key parameters in good manufacturing practice

    DEFF Research Database (Denmark)

    Bøknæs, Niels; Jensen, K.N.; Guldager, H.S.;

    2002-01-01

    The purpose of the present study was to select key parameters in good manufacturing practice for production of thawed chilled modified atmosphere packed (MAP) cod (Gadus morhua) fillets. The effect of frozen storage temperature (-20 and -30 C), frozen storage period (3, 6, 9 and 12 mo) and chill...... parameters in good manufacturing practice for this product. Frozen storage of up to 12 mo had no significant effect on quality attributes and shelf-life at 2degreesC was above 14 d irrespective of the time of frozen storage. As compared to a previous study with Baltic Sea, cod drip losses during chill...

  2. Improving selectivity of the Baltic cod pelagic trawl fishery: Experiments to assess the next step

    DEFF Research Database (Denmark)

    Madsen, Niels; Tschernij, Vesa; Holst, René

    2010-01-01

    Due to declining cod (Gadus morhua) stocks, the Baltic Sea was one of the first areas regulated by the European Communities where selective escape windows were implemented to improve the exploitation pattern. Increasing discard rates and the potential for a significant increase of the spawning...... stock and the yield of the fishery are important reasons to further improve the selectivity of the fishery and to asses the potential next step in this process. In this study, we tested three relatively different design concepts, in the Baltic cod pelagic trawl fishery, that are relevant to past or...... present legislation and that were developed to meet requirements of increased selectivity performance. A standard nominal 135 mm diamond mesh codend, a codend with two nominal 125 mm bottom windows, and a codend with a nominal 125 mm nominal top window were tested using the covered codend method. A Danish...

  3. Developing Baltic cod recruitment models II : Incorporation of environmental variability and species interaction

    DEFF Research Database (Denmark)

    Köster, Fritz; Hinrichsen, H.H.; St. John, Michael;

    2001-01-01

    , predation) were also significant and when incorporated explained 69% of the variation in 0-group recruitment. In other spawning areas, variable hydrographic conditions did not allow for regular successful egg development. Hence, relatively simple models proved sufficient to predict recruitment of 0-group......We investigate whether a process-oriented approach based on the results of field, laboratory, and modelling studies can be used to develop a stock-environment-recruitment model for Central Baltic cod (Gadus morhua). Based on exploratory statistical analysis, significant variables influencing...... survival of early life stages and varying systematically among spawning sites were incorporated into stock-recruitment models, first for major cod spawning sites and then combined for the entire Central Baltic. Variables identified included potential egg production by the spawning stock, abiotic conditions...

  4. Diel variation in feeding and movement patterns of juvenile Atlantic cod at offshore wind farms

    Science.gov (United States)

    Reubens, Jan T.; De Rijcke, Maarten; Degraer, Steven; Vincx, Magda

    2014-01-01

    Atlantic cod (Gadus morhua) is a commercially important fish species suffering from overexploitation in the North-East Atlantic. In recent years, their natural environment is being intensively altered by the construction of offshore wind farms in many coastal areas. These constructions form artificial reefs influencing local biodiversity and ecosystem functioning. It has been demonstrated that Atlantic cod is present in the vicinity of these constructions. However, empirical data concerning the diel activity and feeding behaviour of Atlantic cod in the vicinity of these artificial reefs is lacking. Atlantic cod has a flexible diel activity cycle linked to spatio-temporal variations in food availability and predation risk. In this study we integrated acoustic telemetry with stomach content analysis to quantify diel activity and evaluate diel feeding patterns at a windmill artificial reef (WAR) in the Belgian part of the North Sea. Atlantic cod exhibited crepuscular movements related to feeding activity; a 12 h cycle was found and the highest catch rates and stomach fullness were recorded close to sunset and sunrise. It is suggested that the observed diel movement pattern is related to the prey species community and to predation pressure. Foraging at low ambient light levels (i.e. at dusk and dawn) probably causes a trade-off between foraging success and reducing predation pressure. Fish did not leave the area in-between feeding periods. Hence other benefits (i.e. shelter against currents and predators) besides food availability stimulate the aggregation behaviour at the WARs.

  5. Food intake of young cod and flounder in a shallow bay on the Swedish west coast

    Science.gov (United States)

    Pihl, L.

    The importance of shallow soft bottom areas as nursery grounds for I-ground cod, Gadus morhua, and I- to IV-group flounder, Platichthys flesus, was investigated in a 20 000 m 2 bay, 0 to 1 m deep, on the Swedish west coast. To estimate the amount of visiting fish and their food intake the bay was enclosed with a net once a month from July to November 1979 and from April to November 1980. At each occasion about 60 cods and 8 to 50 flounders were caught. The total biomass of the cod and flounder was 1 to 14 kg and 2 to 13 kg wet weight, respectively. The cod preyed on mobile epifauna such as Carcinus maenas, Crangon crangon and Pomatoschistus spp., whereas the flounder was eating infauna mainly Mya arenaria, Cardium spp. and Nereis spp. The food intake within the area was calculated to approximate 35 and 10 kg wet weight from April to November for cod and flounder, respectively.

  6. A novel and quick method to avoid H2O2 interference on COD measurement in Fenton system by Na2SO3 reduction and O2 oxidation

    DEFF Research Database (Denmark)

    Wang, Yong; Li, Weiguang; Angelidaki, Irini

    2013-01-01

    study, a new method has been developed based on Na2SO3 reduction and O2 oxidation, which has easy operation and short time requirement. Na2SO3 reduction was used to remove H2O2 in water samples, which was independent of pH in the investigated range of 2.50-11.95. Residual Na2SO3 was removed by...... effective in the matrix of Fenton treating real landfill leachate. Meanwhile, the procedure for this method in other applications was proposed in detail. To the best of our knowledge, this newly developed method is the most simple and effective way to avoid H2O2 interference on COD analysis....

  7. Factors determining variations in otolith microincrement width of demersal juvenile Baltic cod Gadus morhua

    DEFF Research Database (Denmark)

    Hüssy, Karin; Mosegaard, Henrik; Hinrichsen, H.H.; Böttcher, U.

    2003-01-01

    -circulation model. The best fit to observed otolith growth rates was obtained under the assumption that fish on the slope performed daily vertical migrations between the warm surface layer and the cold bottom layer. The data suggested that fish stayed in the surface layer during the first increment-pattern interval...

  8. Synthesis and degradation of adenosine triphosphate in cod ( Gadus morhua ) at subzero temperatures

    DEFF Research Database (Denmark)

    Cappeln, Gertrud; Nielsen, Jette; Jessen, Flemming

    1999-01-01

    This study has demonstrated that the extraction step is very important when analysing ATP and its degradation products. An important factor is whether the sample is fresh, frozen or thawed when homogenised since thawing of the sample will lead to rapid loss of ATP. During frozen storage it was...

  9. Climate warming causes life-history evolution in a model for Atlantic cod (Gadus morhua)

    OpenAIRE

    Holt, Rebecca E.; Jørgensen, Christian

    2014-01-01

    Climate change influences the marine environment, with ocean warming being the foremost driving factor governing changes in the physiology and ecology of fish. At the individual level, increasing temperature influences bioenergetics and numerous physiological and life-history processes, which have consequences for the population level and beyond. We provide a statedependent energy allocation model that predicts temperature-induced adaptations for life histories and behaviour for the ...

  10. Individual behaviour of Baltic cod (Gadus morhua) in relation to sex and reproductive state

    DEFF Research Database (Denmark)

    Nielsen, Birgitte; Hüssy, Karin; Neuenfeldt, Stefan; Tomkiewicz, Jonna; Behrens, Jane; Andersen, Ken Haste

    2013-01-01

    Information from data storage tags (DSTs) is conventionally used to infer movement patterns or reveal characteristics (e.g. temperature or salinity) of the environment surrounding tagged fish. Here we link data derived from DSTs with the reproductive physiology of tagged fish. Individual vertical...

  11. Prediction of vertical distribution and ambient development temperature of Baltic cod, Gadus morhua L., eggs

    DEFF Research Database (Denmark)

    Wieland, Kai; Jarre, Astrid

    1997-01-01

    situation was observed. Mean ambient temperatures, calculated from the predicted vertical distributions of the eggs and used for the computation of egg developmental times, were overestimated by 0.05 degrees C on average. This corresponds to an error in prediction of egg developmental time of less than 1%...... validation. The model explained 82% of the variance between observed and predicted relative frequencies of occurrence of the eggs in relation to salinity, temperature and oxygen concentration; The ANN fitted all observations satisfactorily except for one sampling date, where an exceptional hydrographic...

  12. Paternal effects on early life history traits in Northwest Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Kroll, M.-M.; Peck, M.A.; Butts, Ian A.E.;

    2013-01-01

    overall 'weaker' performance of offspring than Female 2, indicating that deviances can stem from differences in female quality. Nevertheless, paternal contributions to embryonic and larval development were still evident despite differences in female quality, showing that sire effects on offspring are...

  13. Male reproductive competition in spawning aggregations of cod ( Gadus morhua , L.)

    DEFF Research Database (Denmark)

    Bekkevold, Dorte; Hansen, Michael Møller; Loeschcke, V.

    2002-01-01

    across a spawning season were analysed. Our results show that multiple males contributed sperm to most spawnings but that paternity frequencies were highly skewed among males, with larger males on average siring higher proportions of offspring. It was further indicated that male reproductive success was...

  14. Effect of ocean acidification on marine fish sperm (Baltic cod: Gadus morhua)

    OpenAIRE

    Frommel, A. Y.; V Stiebens; Clemmesen, C.; J. Havenhand

    2010-01-01

    Ocean acidification, as a consequence of increasing marine pCO2, may have severe effects on the physiology of marine organisms. However, experimental studies remain scarce, in particular concerning fish. While adults will most likely remain relatively unaffected by changes in seawater pH, early life-history stages are potentially more sensitive – particularly the critical stage of fertilization, in which sperm motility plays a central role. In this study, the effects of ocean acidification (d...

  15. Temperature, paternity and asynchronous hatching influence early developmental characteristics of larval Atlantic cod, Gadus morhua

    DEFF Research Database (Denmark)

    Politis, Sebastian Nikitas; Dahlke, Flemming T.; Butts, Ian A.E.;

    2014-01-01

    Offspring, especially during early development, are influenced by both intrinsic properties endowed to them by their parents, extrinsic environmental factors as well as the interplay between genes and the environment. We investigated the effects of paternity (P), temperature (T), and asynchronous...... Atlantic (5.4±0.1 to 2.6±0.3days from 2.0 to 10.0°C) and Baltic larvae (6.2±0.4 to 5.0±0.6days from 6.5 to 12.5°C) and LN increased and AY decreased for every subsequent day of hatch. Deformities increased with increasing T and P × T explained 52.3 and 26.8% of the variance for Atlantic and Baltic larvae......, respectively. In Baltic larvae, size at peak hatch tended to decrease with increasing T and P × T explained 34.6% of the variance. In Atlantic larvae, growth, YUR and YUE were influenced by T while P alone explained 26.0% of the variance in YUE and up to 66.4% of variance in morphological traits at 4 DPH...

  16. Stock recruitment relationships for cod ( Gadus morhua L.) in the central Baltic Sea incorporating environmental variability

    DEFF Research Database (Denmark)

    Jarre, Astrid; Wieland, Kai; MacKenzie, Brian;

    2000-01-01

    investigations on recruitment, which were continued through a partial recovery of the stock in the mid-1990s. The principal factors influencing recruitment and recognized at present are: (i) the volume of water with temperature, oxygen and salinity conditions which meet the minimum requirements for successful...

  17. The use of otolith microstructure to estimate age in adult Atlantic cod Gadus morhua

    DEFF Research Database (Denmark)

    Hüssy, Karin; Hinrichsen, H.H.; Fey, D.P.;

    2010-01-01

    be tightly coupled to the annual cycle in environmental temperature at a depth of 30–60 m, where G. morhua predominantly reside. Between 135 and 200 increments occurred within the different zones, with a non-significant trend towards lower increment numbers and widths with distance from the primary...... primordium of the otolith. Increment formation apparently ceased at temperatures <5–6° C, but growth during the cold months corresponded closely with estimated growth rates. The increment patterns seemed to reflect annual cycles in environmental temperature, and the count of the increment cycles may thus be...... a promising tool for the determination of the true age of Baltic G. morhua....

  18. Antioxidant activity of cod (Gadus morhua) protein hydrolysates: Fractionation and characterisation of peptide fractions.

    Science.gov (United States)

    Sabeena Farvin, K H; Andersen, Lisa Lystbæk; Otte, Jeanette; Nielsen, Henrik Hauch; Jessen, Flemming; Jacobsen, Charlotte

    2016-08-01

    This study aimed to characterise peptide fractions (>5kDa, 3-5kDa and DPPH radical-scavenging activity of the 3-5kDa fraction was exerted mainly by one sub-fraction dominated by peptides with masses below 600Da. The DPPH radical-scavenging activity of the <3kDa fraction was exerted by sub-fractions with low molecular weight. The highest reducing power was found in a sub-fraction containing peptides rich in Arg, Tyr and Phe. Both free amino acids and low molecular weight peptides thus seemed to contribute to the antioxidative activity of the peptide fractions, and Tyr seemed to play a major role in the antioxidant activity. PMID:26988519

  19. The effects of WAF and CEWAF on EROD activity in juvenile Atlantic cod

    International Nuclear Information System (INIS)

    The affects of dispersed oil and hydrocarbons on Atlantic cod were examined in this study in which water accommodated fractions (WAF) of two types of oil were generated in a wave tank or in a baffled flask. Oil droplet sizes of the two systems were comparable. Chemically enhanced water accommodated fractions (CEWAF) of combinations of two oils and two dispersants were prepared in a similar manner. Juvenile Atlantic cod (Gadus morhua) were exposed to a broad range of concentrations of either WAF or CEWAF before being transferred to clean seawater. Periodic sampling of 5 fish confirmed the liver ethoxyresorufin-O-deethylas (EROD) activity. At the end of a 4 hour exposure, EROD activity was no different from the controls, but it was much higher after 20 hours at CEWAF concentrations above 2 percent v/v regardless of oil or dispersant type. Over the next 48 hours, EROD activity declined and did not return to control or pre-treatment levels even after 72 hours. EROD in livers from cod exposed to WAF was much higher after 24 hours at concentrations of 12 percent v/v or higher, reaching a maximum of 8 picomoles/mg protein/min. After 72 hours, EROD activity in WAF-exposed livers decreased to pre-treatment levels. The study showed that a brief 4 hour exposure to WAF and CEWAF can induce EROD activity in livers of juvenile cod and that the surge in enzyme activity can continue for 24-48 hours.

  20. The effects of WAF and CEWAF on EROD activity in juvenile Atlantic cod

    Energy Technology Data Exchange (ETDEWEB)

    Burridge, L.; Lyons, M.; Wong, D.; Li, Z.; Lee, K. [Fisheries and Oceans Canada, Ottawa, ON (Canada)

    2010-07-01

    The affects of dispersed oil and hydrocarbons on Atlantic cod were examined in this study in which water accommodated fractions (WAF) of two types of oil were generated in a wave tank or in a baffled flask. Oil droplet sizes of the two systems were comparable. Chemically enhanced water accommodated fractions (CEWAF) of combinations of two oils and two dispersants were prepared in a similar manner. Juvenile Atlantic cod (Gadus morhua) were exposed to a broad range of concentrations of either WAF or CEWAF before being transferred to clean seawater. Periodic sampling of 5 fish confirmed the liver ethoxyresorufin-O-deethylas (EROD) activity. At the end of a 4 hour exposure, EROD activity was no different from the controls, but it was much higher after 20 hours at CEWAF concentrations above 2 percent v/v regardless of oil or dispersant type. Over the next 48 hours, EROD activity declined and did not return to control or pre-treatment levels even after 72 hours. EROD in livers from cod exposed to WAF was much higher after 24 hours at concentrations of 12 percent v/v or higher, reaching a maximum of 8 picomoles/mg protein/min. After 72 hours, EROD activity in WAF-exposed livers decreased to pre-treatment levels. The study showed that a brief 4 hour exposure to WAF and CEWAF can induce EROD activity in livers of juvenile cod and that the surge in enzyme activity can continue for 24-48 hours.

  1. Acoustically Induced Streaming Flows near a Model Cod Otolith and their Potential Implications for Fish Hearing

    Energy Technology Data Exchange (ETDEWEB)

    Kotas, Charlotte W [ORNL; Rogers, Peter [Georgia Institute of Technology; Yoda, Minami [Georgia Institute of Technology

    2011-01-01

    The ears of fishes are remarkable sensors for the small acoustic disturbances associated with underwater sound. For example, each ear of the Atlantic cod (Gadus morhua) has three dense bony bodies (otoliths) surrounded by fluid and tissue, and detects sounds at frequencies from 30 to 500 Hz. Atlantic cod have also been shown to localize sounds. However, how their ears perform these functions is not fully understood. Steady streaming, or time-independent, flows near a 350% scale model Atlantic cod otolith immersed in a viscous fluid were studied to determine if these fluid flows contain acoustically relevant information that could be detected by the ear s sensory hair cells. The otolith was oscillated sinusoidally at various orientations at frequencies of 8 24 Hz, corresponding to an actual frequency range of 280 830 Hz. Phaselocked particle pathline visualizations of the resulting flows give velocity, vorticity, and rate of strain fields over a single plane of this mainly two-dimensional flow. Although the streaming flows contain acoustically relevant information, the displacements due to these flows are likely too small to explain Atlantic cod hearing abilities near threshold. The results, however, may suggest a possible mechanism for detection of ultrasound in some fish species.

  2. Spatio-temporal variability of the North Sea cod recruitment in relation to temperature and zooplankton.

    Directory of Open Access Journals (Sweden)

    Delphine Nicolas

    Full Text Available The North Sea cod (Gadus morhua, L. stock has continuously declined over the past four decades linked with overfishing and climate change. Changes in stock structure due to overfishing have made the stock largely dependent on its recruitment success, which greatly relies on environmental conditions. Here we focus on the spatio-temporal variability of cod recruitment in an effort to detect changes during the critical early life stages. Using International Bottom Trawl Survey (IBTS data from 1974 to 2011, a major spatio-temporal change in the distribution of cod recruits was identified in the late 1990s, characterized by a pronounced decrease in the central and southeastern North Sea stock. Other minor spatial changes were also recorded in the mid-1980s and early 1990s. We tested whether the observed changes in recruits distribution could be related with direct (i.e. temperature and/or indirect (i.e. changes in the quantity and quality of zooplankton prey effects of climate variability. The analyses were based on spatially-resolved time series, i.e. sea surface temperature (SST from the Hadley Center and zooplankton records from the Continuous Plankton Recorder Survey. We showed that spring SST increase was the main driver for the most recent decrease in cod recruitment. The late 1990s were also characterized by relatively low total zooplankton biomass, particularly of energy-rich zooplankton such as the copepod Calanus finmarchicus, which have further contributed to the decline of North Sea cod recruitment. Long-term spatially-resolved observations were used to produce regional distribution models that could further be used to predict the abundance of North Sea cod recruits based on temperature and zooplankton food availability.

  3. Cheating about the cod

    OpenAIRE

    Hannesson, Rögnvaldur

    2006-01-01

    The Northeast Arctic cod is managed by a total quota shared evenly between Norway and Russia. It appears that Russia has been overfishing its quota by substantial amounts for a number of years, due to insufficient monitoring of fishing vessels. This paper considers what would be the best reply by Norway to given levels of Russian overfishing. It is found that in most cases the best Norwegian reply would be also to overfish its quota. An aggregate biomass model with stochastic growth and recru...

  4. Distribution of the early larval stages of cod, plaice and lesser sandeel across haline fronts in the North Sea

    DEFF Research Database (Denmark)

    Munk, Peter; Wright, P.J.; Pihl, Niels Jørgen

    2002-01-01

    A number of commercially important fish species spawn in the coastal areas of the North Sea in the late winter, including cod (Gadus morhua), plaice (Pleuronectes platessa) and lesser sandeel (Ammodytes marinus). The distribution of the early stages of these species overlap to some extent...... goals were to ascertain the major traits of larval distribution patterns and the spatial correspondence among species, focusing on the relationship between larval distributions and hydrographic characteristics. Larvae of all three species were found distributed within the shallow Regions of Freshwater...... Influence (ROFI), predominantly in the Dogger Bank and German Bight areas. There was a high degree of overlap between the distributions of cod and plaice, while the maximal abundance of lesser sandeel was found inshore of the other species. Larval distributions were to a large extent confined by the frontal...

  5. The effect of twine thickness on the size selectivity and fishing power of Baltic cod gill nets

    DEFF Research Database (Denmark)

    Holst, René; Wileman, D.; Madsen, Niels

    2002-01-01

    . Method of capture, condition factor and girths were measured for sub- samples of the cod caught. A model of the size selectivity of the gill nets was adapted to the experimental conditions where two gears were fished on the same population. This model was fitted to the catch data for each set......Sea trials were carried out on a Danish commercial vessel measuring the size selectivity and fishing power of gill nets used to catch Baltic cod (Gadus morhua). A comparison was made of two different twine thicknesses at two different times of the year. Nominal mesh sizes of 70-130 mm were used....... Subsequently a model was fitted for the mean selectivity taking between-set variation into account. The selectivity Curve that fitted the data best was given by the sum of two normal distributions. It was found that twine thickness and trials period had relatively little effect upon the shape of the...

  6. Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery.

    Science.gov (United States)

    Pershing, Andrew J; Alexander, Michael A; Hernandez, Christina M; Kerr, Lisa A; Le Bris, Arnault; Mills, Katherine E; Nye, Janet A; Record, Nicholas R; Scannell, Hillary A; Scott, James D; Sherwood, Graham D; Thomas, Andrew C

    2015-11-13

    Several studies have documented fish populations changing in response to long-term warming. Over the past decade, sea surface temperatures in the Gulf of Maine increased faster than 99% of the global ocean. The warming, which was related to a northward shift in the Gulf Stream and to changes in the Atlantic Multidecadal Oscillation and Pacific Decadal Oscillation, led to reduced recruitment and increased mortality in the region's Atlantic cod (Gadus morhua) stock. Failure to recognize the impact of warming on cod contributed to overfishing. Recovery of this fishery depends on sound management, but the size of the stock depends on future temperature conditions. The experience in the Gulf of Maine highlights the need to incorporate environmental factors into resource management. PMID:26516197

  7. Larval trophodynamics, turbulence, and drift on Georges Bank : A sensitivity analysis of cod and haddock

    DEFF Research Database (Denmark)

    Werner, F.E.; MacKenzie, Brian; Perry, R.I.; Lough, R.G.; Naimie, C.E.; Blanton, B.O.; Quinlan, J.A.

    2001-01-01

    Using an individual-based model approach we consider trophodynamic effects on the growth and survival of larval cod (Gadus morhua) and haddock (Melanogrammus aeglefinus) on Georges Bank during late winter/early spring. These studies represent an extension of results described in Werner et al. (1996...... behaviour, the effect of turbulence on pursuit and capture, and vertical dispersion decrease the predicted larval growth rates compared to those observed in the earlier study. These results suggest that larval feeding behaviour, and especially the ability of larvae to pursue encountered prey, could be an...... important input to larval growth and survival models. The inclusion of turbulence in determining the position of passive larvae in the water column allows the larvae to sample the entire water column, contributing to a decrease in the variance of the size of the larvae over time. The ability of larvae to...

  8. Ice-age survival of Atlantic cod: agreement between palaeoecology models and genetics

    Science.gov (United States)

    Bigg, Grant R; Cunningham, Clifford W; Ottersen, Geir; Pogson, Grant H; Wadley, Martin R; Williamson, Phillip

    2007-01-01

    Scant scientific attention has been given to the abundance and distribution of marine biota in the face of the lower sea level, and steeper latitudinal gradient in climate, during the ice-age conditions that have dominated the past million years. Here we examine the glacial persistence of Atlantic cod (Gadus morhua) populations using two ecological-niche-models (ENM) and the first broad synthesis of multi-locus gene sequence data for this species. One ENM uses a maximum entropy approach (Maxent); the other is a new ENM for Atlantic cod, using ecophysiological parameters based on observed reproductive events rather than adult distribution. Both the ENMs were tested for present-day conditions, then used to hindcast ranges at the last glacial maximum (LGM) ca 21 kyr ago, employing climate model data. Although the LGM range of Atlantic cod was much smaller, and fragmented, both the ENMs agreed that populations should have been able to persist in suitable habitat on both sides of the Atlantic. The genetic results showed a degree of trans-Atlantic divergence consistent with genealogically continuous populations on both sides of the North Atlantic since long before the LGM, confirming the ENM results. In contrast, both the ENMs and the genetic data suggest that the Greenland G. morhua population post-dates the LGM. PMID:17999951

  9. Composition and properties of the soluble organic matrix of the otolith of a marine fish: Gadus morhua Linne, 1758 (Teleostei, Gadidae).

    Science.gov (United States)

    Dauphin, Y; Dufour, E

    2003-03-01

    The soluble matrix of the sagittal otolith of the cod Gadus morhua was analyzed using UV and IR spectroscopy, liquid chromatography and electrophoresis. This matrix is a complex mixture of proteins and glycoproteins, with a large range of molecular weights. High weights (>1000 kDa) are shown for the first time in water-soluble matrix of otolith. However, the 2D denaturing electrophoresis and large range of sorting used in high performance liquid chromatography columns do not separate the soluble matrix to well-defined molecular weights. The IR data indicate that several conformations are present and the main part of the sugars is not sulfated. Additionally, electrophoresis data show that the acidity of the sugar components is higher than that of the proteins. Despite the relative scarcity of literature data, our study of G. morhua suggests that the chemical composition of otolith soluble organic matrix may differ among species. PMID:12600664

  10. Characterization of Atlantic cod spawning habitat and behavior in Icelandic coastal waters.

    Directory of Open Access Journals (Sweden)

    Timothy B Grabowski

    Full Text Available The physical habitat used during spawning may potentially be an important factor affecting reproductive output of broadcast spawning marine fishes, particularly for species with complex, substrate-oriented mating systems and behaviors, such as Atlantic cod Gadus morhua. We characterized the habitat use and behavior of spawning Atlantic cod at two locations off the coast of southwestern Iceland during a 2-d research cruise (15-16 April 2009. We simultaneously operated two different active hydroacoustic gear types, a split beam echosounder and a dual frequency imaging sonar (DIDSON, as well as a remotely operated underwater vehicle (ROV. A total of five fish species were identified through ROV surveys: including cusk Brosme brosme, Atlantic cod, haddock Melanogrammus aeglefinus, lemon sole Microstomus kitt, and Atlantic redfish Sebastes spp. Of the three habitats identified in the acoustic surveys, the transitional habitat between boulder/lava field and sand habitats was characterized by greater fish density and acoustic target strength compared to that of sand or boulder/lava field habitats independently. Atlantic cod were observed behaving in a manner consistent with published descriptions of spawning. Individuals were observed ascending 1-5 m into the water column from the bottom at an average vertical swimming speed of 0.20-0.25 m s(-1 and maintained an average spacing of 1.0-1.4 m between individuals. Our results suggest that cod do not choose spawning locations indiscriminately despite the fact that it is a broadcast spawning fish with planktonic eggs that are released well above the seafloor.

  11. Daily rhythmicity of clock gene transcripts in atlantic cod fast skeletal muscle.

    Directory of Open Access Journals (Sweden)

    Carlo C Lazado

    Full Text Available The classical notion of a centralized clock that governs circadian rhythmicity has been challenged with the discovery of peripheral oscillators that enable organisms to cope with daily changes in their environment. The present study aimed to identify the molecular clock components in Atlantic cod (Gadus morhua and to investigate their daily gene expression in fast skeletal muscle. Atlantic cod clock genes were closely related to their orthologs in teleosts and tetrapods. Synteny was conserved to varying degrees in the majority of the 18 clock genes examined. In particular, aryl hydrocarbon receptor nuclear translocator-like 2 (arntl2, RAR-related orphan receptor A (rora and timeless (tim displayed high degrees of conservation. Expression profiling during the early ontogenesis revealed that some transcripts were maternally transferred, namely arntl2, cryptochrome 1b and 2 (cry1b and cry2, and period 2a and 2b (per2a and per2b. Most clock genes were ubiquitously expressed in various tissues, suggesting the possible existence of multiple peripheral clock systems in Atlantic cod. In particular, they were all detected in fast skeletal muscle, with the exception of neuronal PAS (Per-Arnt-Single-minded domain-containing protein (npas1 and rora. Rhythmicity analysis revealed 8 clock genes with daily rhythmic expression, namely arntl2, circadian locomotor output cycles kaput (clock, npas2, cry2, cry3 per2a, nuclear receptor subfamily 1, group D, member 1 (nr1d1, and nr1d2a. Transcript levels of the myogenic genes myogenic factor 5 (myf5 and muscleblind-like 1 (mbnl1 strongly correlated with clock gene expression. This is the first study to unravel the molecular components of peripheral clocks in Atlantic cod. Taken together, our data suggest that the putative clock system in fast skeletal muscle of Atlantic cod has regulatory implications on muscle physiology, particularly in the expression of genes related to myogenesis.

  12. Industry Based Survey (IBS) Cod

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The "Gulf of Maine Atlantic Cod Industry-Based Survey" was a collaboration of the Massachusetts Division of Marine Fisheries and the fishing industry, with support...

  13. Northeast Regional Cod Tagging Program

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Scientific justification: Canadian and US stock assessments for Atlantic cod indicate considerable fluctuation in stock abundance and recruitment over the last 20...

  14. Long distance linkage disequilibrium and limited hybridization suggest cryptic speciation in atlantic cod.

    Science.gov (United States)

    Bradbury, Ian R; Bowman, Sharen; Borza, Tudor; Snelgrove, Paul V R; Hutchings, Jeffrey A; Berg, Paul R; Rodríguez-Ezpeleta, Naiara; Lighten, Jackie; Ruzzante, Daniel E; Taggart, Christopher; Bentzen, Paul

    2014-01-01

    Hybrid zones provide unprecedented opportunity for the study of the evolution of reproductive isolation, and the extent of hybridization across individuals and genomes can illuminate the degree of isolation. We examine patterns of interchromosomal linkage disequilibrium (ILD) and the presence of hybridization in Atlantic cod, Gadus morhua, in previously identified hybrid zones in the North Atlantic. Here, previously identified clinal loci were mapped to the cod genome with most (∼70%) occurring in or associated with (<5 kb) coding regions representing a diverse array of possible functions and pathways. Despite the observation that clinal loci were distributed across three linkage groups, elevated ILD was observed among all groups of clinal loci and strongest in comparisons involving a region of low recombination along linkage group 7. Evidence of ILD supports a hypothesis of divergence hitchhiking transitioning to genome hitchhiking consistent with reproductive isolation. This hypothesis is supported by Bayesian characterization of hybrid classes present and we find evidence of common F1 hybrids in several regions consistent with frequent interbreeding, yet little evidence of F2 or backcrossed individuals. This work suggests that significant barriers to hybridization and introgression exist among these co-occurring groups of cod either through strong selection against hybrid individuals, or genetic incompatibility and intrinsic barriers to hybridization. In either case, the presence of strong clinal trends, and little gene flow despite extensive hybridization supports a hypothesis of reproductive isolation and cryptic speciation in Atlantic cod. Further work is required to test the degree and nature of reproductive isolation in this species. PMID:25259573

  15. Long distance linkage disequilibrium and limited hybridization suggest cryptic speciation in atlantic cod.

    Directory of Open Access Journals (Sweden)

    Ian R Bradbury

    Full Text Available Hybrid zones provide unprecedented opportunity for the study of the evolution of reproductive isolation, and the extent of hybridization across individuals and genomes can illuminate the degree of isolation. We examine patterns of interchromosomal linkage disequilibrium (ILD and the presence of hybridization in Atlantic cod, Gadus morhua, in previously identified hybrid zones in the North Atlantic. Here, previously identified clinal loci were mapped to the cod genome with most (∼70% occurring in or associated with (<5 kb coding regions representing a diverse array of possible functions and pathways. Despite the observation that clinal loci were distributed across three linkage groups, elevated ILD was observed among all groups of clinal loci and strongest in comparisons involving a region of low recombination along linkage group 7. Evidence of ILD supports a hypothesis of divergence hitchhiking transitioning to genome hitchhiking consistent with reproductive isolation. This hypothesis is supported by Bayesian characterization of hybrid classes present and we find evidence of common F1 hybrids in several regions consistent with frequent interbreeding, yet little evidence of F2 or backcrossed individuals. This work suggests that significant barriers to hybridization and introgression exist among these co-occurring groups of cod either through strong selection against hybrid individuals, or genetic incompatibility and intrinsic barriers to hybridization. In either case, the presence of strong clinal trends, and little gene flow despite extensive hybridization supports a hypothesis of reproductive isolation and cryptic speciation in Atlantic cod. Further work is required to test the degree and nature of reproductive isolation in this species.

  16. How cod shapes its world

    NARCIS (Netherlands)

    A. van Leeuwen; A.M. de Roos; L. Persson

    2008-01-01

    Cod stocks in the North West Atlantic and the Baltic Sea have shown similar dynamics in recent decades with a rapid decline in abundance and a lack of stock recovery following a period of large biomass. We explore whether the lack of recovery can be ascribed to an emergent Allee effect, which is a m

  17. Transcriptome profiling of the antiviral immune response in Atlantic cod macrophages.

    Science.gov (United States)

    Eslamloo, Khalil; Xue, Xi; Booman, Marije; Smith, Nicole C; Rise, Matthew L

    2016-10-01

    A study was conducted to determine the transcriptome response of Atlantic cod (Gadus morhua) macrophages to the viral mimic, polyriboinosinic polyribocytidylic acid (pIC), using a 20K Atlantic cod microarray platform and qPCR. We identified 285 significantly up-regulated and 161 significantly down-regulated probes in cod macrophages 24 h after pIC stimulation. A subset of 26 microarray-identified transcripts was subjected to qPCR validation using samples treated with pIC or phosphate-buffered saline (control) over time (3, 6, 12, 24, 48 h), and 77% of them showed a significant response to pIC. The microarray and qPCR analyses in this study showed that pIC induced the expression of cod macrophage transcripts involved in RLR- and TLR-dependent pathogen recognition (e.g. tlr3, tlr7, mda5 and lgp2), as well as signal transducers (e.g. stat1 and nfkbia) and transcription activators (e.g. irf7 and irf10) in the MyD88-independent and dependent signalling pathways. Several immune effectors (e.g. isg15s, viperin, herc4, mip2 and ccl13) were significantly up-regulated in pIC-stimulated cod macrophages. The expression of some transcripts (e.g. irf7, irf10, viperin) was significantly up-regulated by pIC as early as 12 h. All pIC-induced transcripts had peak expression at either 24 h (e.g. tlr7, irf7, mip2) or 48 h (e.g. tlr3, lgp2, stat1). This study suggests possible roles of both vertebrate-conserved (e.g. tlr3 as an up-regulated gene) and fish-specific (tlr22g as a down-regulated gene) receptors in dsRNA recognition, and the importance of conserved and potentially fish-specific interferon stimulated genes in cod macrophages. PMID:27255218

  18. Forecasting the Major Influences of Predation and Environment on Cod Recovery in the Northern Gulf of St. Lawrence

    Science.gov (United States)

    Bousquet, Nicolas; Chassot, Emmanuel; Duplisea, Daniel E.; Hammill, Mike O.

    2014-01-01

    The northern Gulf of St. Lawrence (NGSL) stock of Atlantic cod (Gadus morhua), historically the second largest cod population in the Western Atlantic, has known a severe collapse during the early 1990 s and is currently considered as endangered by the Committee on the Status of Endangered Wildlife in Canada. As for many fish populations over the world which are currently being heavily exploited or overfished, urgent management actions in the form of recovery plans are needed for restoring this stock to sustainable levels. Stochastic projections based on a statistical population model incorporating predation were conducted over a period of 30 years (2010–2040) to assess the expected outcomes of alternative fishing strategies on the stock recovery under different scenarios of harp seal (Pagophilus groenlandicus) abundance and environmental conditions. This sensitivity study shows that water temperature is key in the rebuilding of the NGSL cod stock. Model projections suggest that maintaining the current management practice under cooler water temperatures is likely to maintain the species in an endangered status. Under current or warmer conditions in the Gulf of St. Lawrence, partial recovery might only be achieved by significant reductions in both fishing and predation pressure. In the medium-term, a management strategy that reduces catch could be favoured over a complete moratorium so as to minimize socio-economic impacts on the industry. PMID:24523852

  19. Groundfish overfishing, diatom decline, and the marine silica cycle: Lessons from Saanich Inlet, Canada, and the Baltic Sea cod crash

    Science.gov (United States)

    Katz, Timor; Yahel, Gitai; Yahel, Ruthy; Tunnicliffe, Verena; Herut, Barak; Snelgrove, Paul; Crusius, John; Lazar, Boaz

    2009-12-01

    In this study, we link groundfish activity to the marine silica cycle and suggest that the drastic mid-1980s crash of the Baltic Sea cod (Gadus morhua) population triggered a cascade of events leading to decrease in dissolved silica (DSi) and diatom abundance in the water. We suggest that this seemingly unrelated sequence of events was caused by a marked decline in sediment resuspension associated with reduced groundfish activity resulting from the cod crash. In a study in Saanich Inlet, British Columbia, Canada, we discovered that, by resuspending bottom sediments, groundfish triple DSi fluxes from the sediments and reduce silica accumulation therein. Using these findings and the available oceanographic and environmental data from the Baltic Sea, we estimate that overfishing and recruitment failure of Baltic cod reduced by 20% the DSi supply from bottom sediments to the surface water leading to a decline in the diatom population in the Baltic Sea. The major importance of the marginal ocean in the marine silica cycle and the associated high population density of groundfish suggest that groundfish play a major role in the silica cycle. We postulate that dwindling groundfish populations caused by anthropogenic perturbations, e.g., overfishing and bottom water anoxia, may cause shifts in marine phytoplankton communities.

  20. Hydroacoustic resolution of small-scale vertical distribution in Baltic cod Gadus morhua - habitat choise and limits during spawning

    DEFF Research Database (Denmark)

    Schaber, Matthias; Hinrichsen, Hans-Harald; Neuenfeldt, Stefan;

    2009-01-01

    Highly stratified marine ecosystems with dynamic features such as fronts or clines in salinity, temperature, or oxygen concentration challenge an individual's ability to select suitable living conditions. Ultimately,, environmental heterogeneity organizes the spatial distributions of populations...... therefore consider this method to be a useful tool to analyze individual behavior and its implications for the population's spatial distribution in stratified environments....

  1. Climate-Induced Evolution of the Behaviour and Life-History Strategies of Atlantic Cod (Gadus morhua). A Modelling Approach

    OpenAIRE

    Holt, Rebecca

    2015-01-01

    Climate change influences the marine environment, with ocean warming being the foremost driving factor governing changes in the physiology and ecology of fish. At the individual level temperature can directly influence numerous physiology processes in marine fish as well as bioenergetics, having consequences for life-history processes and population level consequences. A primary mechanism through which temperature can affect fish is through respiratory physiology as it has consequences for pe...

  2. Microgeographical population structure and adaptation in Atlantic cod Gadus morhua: spatio-temporal insights from gene-associated DNA markers

    DEFF Research Database (Denmark)

    Poulsen, Nina Aagaard; Hemmer-Hansen, Jakob; Loeschcke, V.; Carvalho, G.R.; Eg Nielsen, Einar

    2011-01-01

    populations, indicating long-term temporal adaptive stability driven by strong local selection. In an environmentally dynamic area, on the other hand, patterns of genetic structuring were more variable. Overall, our results not only suggest separation of populations under both evolutionary and ecological......Recent technical advances have stimulated studies on spatial scales of adaptive genetic variation in marine fishes. However, very few studies have combined spatial and temporal sampling to investigate adaptive genetic structuring at local and microgeographical scales, i.e. scales at which neutral...... stability, we included long- and short-term (i.e. from 24 to 38 and from 8 to 11 yr, ­respectively) temporally replicated samples from a subset of populations. As expected, we found very low levels of neutral genetic population structure (FST = 0.003). Three specific loci, however, showed highly elevated...

  3. POP induced oxidative stress and its effect on fatty acid composition in Atlantic Cod (Gadus morhua) mitochondria

    OpenAIRE

    Tveit, Anne Mari

    2010-01-01

    The North Sea is becoming heavily contaminated by organic pollutants. The dominating sources of contamination are land-based releases, transport and offshore oil and gas industry. This creates a complex spectrum of different persistent contaminants accumulating in the fish in the North Sea. The dominating pollutants are Persistent Organic Pollutants (POPs) such as organic chlorinated (PCB, DDT), brominated (PBDE) and fluorinated (PFOS) compounds from industrial waste products. There are also ...

  4. Towards sustainable fisheries of the Öresund cod (Gadus morhua) through sub-stock-specific assessment and management recommendations

    DEFF Research Database (Denmark)

    Lindegren, Martin; Waldo, Staffan; Nilsson, P. Anders; Svedäng, Henrik; Persson, Anders

    2013-01-01

    Fisheries management traditionally relies on stock assessments assuming discrete populations within large administrational areas. However, failing to account for sub-stock structuring may result in overestimation of the stocks' true harvest potential and unsustainable exploitation of small stock......-term net benefits to the local gill-net fishery. Furthermore, our study emphasizes the need for developing sub-stock-specific management recommendations in order to ensure the maintenance of fisheries resources in general, and the persistence of sub-stock structuring in particular....

  5. Larval and small juvenile cod Gadus morhua concentrated in the highly productive areas of a shelf break front

    DEFF Research Database (Denmark)

    Munk, Peter; Larsson, P.O.; Danielsen, D.;

    1995-01-01

    concentration were profiled through the water column. Zooplankton were sampled by a submersible pump and abundance of fish larvae/juveniles were estimated by depth- integrating tows of a 2 m ring net. The hydrographical measurements indicated a shelf break front positioned along the shelf slope in the southern...

  6. Identifying potential for fisheries-induced evolution on behavioral traits of a Skagerrak cod (Gadus morhua) population.

    OpenAIRE

    Rivas Sanchez, David Felipe

    2015-01-01

    Fisheries activities and the development of more efficient fishing gear, have had detrimental effects in commercial stocks. This occurs largely as a result of negative selection acting on certain individuals during the harvesting process. Empirical observations show that fishing mortality and/or selective fishing pressure, leads to reductions in age and size at maturity of fish. Research shows that this is not only driven by phenotypic plasticity, but also by an evolutionary mechanism. Simila...

  7. New species in the genus Francisella (Gammaproteobacteria; Francisellaceae); Francisella piscicida sp. nov. isolated from cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Ottem, Karl F; Nylund, Are; Karlsbakk, Egil; Friis-Møller, Alice; Krossøy, Bjørn; Knappskog, Dag

    2007-01-01

    A, lipoprotein TUL4 (LpnA), malate dehydrogenase and hypothetical lipoprotein (LpnB) sequences. A comparison between GM2212 and the type strain of Francisella philomiragia were performed by DNA-DNA hybridization and fatty acid analysis. The DNA-DNA hybridization showed a 70% similarity. The fatty acid analysis...

  8. Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Nielsen, Einar Eg; Hemmer-Hansen, Jakob; Poulsen, Nina Aagaard; Loeschcke, Volker; Moen, Thomas; Johansen, Johansen; Mittelholzer, Christian; Taranger, Geir-Lasse; Ogden, Rob; Carvalho, Gary R.

    2009-01-01

    Background Marine fishes have been shown to display low levels of genetic structuring and associated high levels of gene flow, suggesting shallow evolutionary trajectories and, possibly, limited or lacking adaptive divergence among local populations. We investigated variation in 98 gene-associate......Background Marine fishes have been shown to display low levels of genetic structuring and associated high levels of gene flow, suggesting shallow evolutionary trajectories and, possibly, limited or lacking adaptive divergence among local populations. We investigated variation in 98 gene...... DNA from archived otoliths from a Faeroese population demonstrated stability of the intra-population variation over 24 years. An exploratory landscape genetic analysis was used to elucidate potential effects of the most likely environmental factors responsible for the signatures of local adaptation...... despite seemingly high levels of gene flow, as found in most marine fishes. Thus, results have important implications for our understanding of the interplay of evolutionary forces in general, and for the conservation of marine biodiversity under rapidly increasing evolutionary pressure from climate and...

  9. Large effective population size and temporal genetic stability in Atlantic cod (Gadus morhua) in the southern Gulf of St. Lawrence

    DEFF Research Database (Denmark)

    Therkildsen, Nina Overgaard; Eg Nielsen, Einar; Swain, Douglas P.;

    2010-01-01

    Worldwide, many commercial fish stocks have experienced dramatic declines due to overfishing. Such fisheries-induced population reductions could potentially erode the genetic diversity of marine fish populations. Based on analyses of DNA extracted from archived and contemporary samples, this paper...

  10. Effects of reproduction on growth and survival in Atlantic cod, Gadus morhua, assessed by comparison to triploids

    DEFF Research Database (Denmark)

    Trippel, Edward A.; Butts, Ian; Babin, Amanda;

    2014-01-01

    . years, but there was at age 3. years. At age 2. years, low investment in reproduction likely accounted for the lack of a somatic cost of reproduction, whereas at age 4 the absence was associated with heightened growth post-spawning enabling mature fish to catch up to immature fish. At age 3......, compensatory growth during post-spawning was below that of immature fish. Survival represented a significant component of the cost of reproduction. Laboratory experiments examining the cost of reproduction have traditionally focused on shorter time periods, commonly spanning several months, whereas ours...... spanned nearly four years. Although previously done for bivalves, to our knowledge, this is the first time the cost of reproduction has been evaluated using triploid fish as a comparator...

  11. Lessons for fisheries management from the EU cod recovery plan

    DEFF Research Database (Denmark)

    Kraak, S.B.M.; Bailey, N.; Cardinale, M.;

    2013-01-01

    mortality in targeted fisheries, although fishers experienced them as prohibiting the full uptake of other quotas. Recommendations for future plans include (i) management through catch rather than landings quotas, (ii) the internalisation of the costs of exceeding quotas, (iii) use of more selective gear......The performance of the EU long-term management plan for cod stocks, in force since 2009, is analysed focusing on the human and institutional factors. The plan operates through landings quotas (TACs) and effort restrictions following a Harvest Control Rule, and deploys a novel instrument allowing...... Member States to 'buy back' or increase fishing effort for fleet segments engaged in cod-avoidance measures. The stipulated fishing mortality reductions have not been achieved. On the positive side, the 'buy-back' instrument has led to increased uptake of selective gear and implementation of permanent...

  12. Avoid Logs to Avoid Ticks

    Institute of Scientific and Technical Information of China (English)

    莫文佳

    2004-01-01

    扁虱是莱姆关节炎的罪魁祸首。研究人员为了弄明白何处扁虱最猖獗, 不惜以身作饵,他们发现:The ticks were all over the log surface。因此告诫人 们:Avoid sitting on logs。

  13. Effects of ration size and hypoxia on specific dynamic action in the cod

    DEFF Research Database (Denmark)

    Jordan, Anders D; Steffensen, John F

    2007-01-01

    We present the first data on the effect of hypoxia on the specific dynamic action (SDA) in a teleost fish. Juvenile cod (Gadus morhua) were fed meals of 2.5% and 5% of their wet body mass (BM) in normoxia (19.8 kPa Po(2)) and 5% BM in hypoxia (6.3 kPa Po(2)). Reduced O(2) availability depressed the...... postprandial peaks of oxygen consumption, and to compensate for this, the total SDA duration lasted 212.0+/-20 h in hypoxia, compared with 95.1+/-25 h in normoxia. The percentage of energy associated with the meal digestion and assimilation (SDA coefficient) was equivalent between the different feeding rations...... but higher for fish exposed to hypoxia. Comparing peak oxygen consumption during the SDA course with maximum metabolic rates showed that food rations of 2.5% and 5% BM reduced the scope for activity by 40% and 55%, while ingestion of 5% BM in hypoxia occupied 69% of the aerobic scope, leaving little...

  14. "Islands of Divergence" in the Atlantic Cod Genome Represent Polymorphic Chromosomal Rearrangements.

    Science.gov (United States)

    Sodeland, Marte; Jorde, Per Erik; Lien, Sigbjørn; Jentoft, Sissel; Berg, Paul R; Grove, Harald; Kent, Matthew P; Arnyasi, Mariann; Olsen, Esben Moland; Knutsen, Halvor

    2016-01-01

    In several species genetic differentiation across environmental gradients or between geographically separate populations has been reported to center at "genomic islands of divergence," resulting in heterogeneous differentiation patterns across genomes. Here, genomic regions of elevated divergence were observed on three chromosomes of the highly mobile fish Atlantic cod (Gadus morhua) within geographically fine-scaled coastal areas. The "genomic islands" extended at least 5, 9.5, and 13 megabases on linkage groups 2, 7, and 12, respectively, and coincided with large blocks of linkage disequilibrium. For each of these three chromosomes, pairs of segregating, highly divergent alleles were identified, with little or no gene exchange between them. These patterns of recombination and divergence mirror genomic signatures previously described for large polymorphic inversions, which have been shown to repress recombination across extensive chromosomal segments. The lack of genetic exchange permits divergence between noninverted and inverted chromosomes in spite of gene flow. For the rearrangements on linkage groups 2 and 12, allelic frequency shifts between coastal and oceanic environments suggest a role in ecological adaptation, in agreement with recently reported associations between molecular variation within these genomic regions and temperature, oxygen, and salinity levels. Elevated genetic differentiation in these genomic regions has previously been described on both sides of the Atlantic Ocean, and we therefore suggest that these polymorphisms are involved in adaptive divergence across the species distributional range. PMID:26983822

  15. Sensory characteristics of different cod products

    DEFF Research Database (Denmark)

    Sveinsdottir, K.; Martinsdottir, E.; Hyldig, Grethe;

    2010-01-01

    Sensory characteristics of cod products available to consumers were analyzed, and different ways to analyze sensory results were viewed. Ten cod samples of different origin (wild and farmed cod), storage time (short and extended) and storage method (stored fresh, frozen or packed in modified...... atmosphere) were evaluated with quantitative descriptive analysis by a trained sensory panel. Signal-to-noise analysis, p*MSE (discrimination and repeatability) and line plots proved to be very useful in studying panelists' performance. Most sensory attributes described significant differences between the...... products, and principal component analysis provided an overview of the differences and similarities between the products with regard to sensory characteristics. Farmed cod had different sensory characteristics compared with wild cod, such as more meat flavor, and rubbery and meaty texture. Different...

  16. First feed affects the expressions of microRNA and their targets in Atlantic cod.

    Science.gov (United States)

    Bizuayehu, Teshome Tilahun; Furmanek, Tomasz; Karlsen, Ørjan; van der Meeren, Terje; Edvardsen, Rolf Brudvik; Rønnestad, Ivar; Hamre, Kristin; Johansen, Steinar D; Babiak, Igor

    2016-04-14

    To our knowledge, there is no report on microRNA (miRNA) expression and their target analysis in relation to the type of the first feed and its effect on the further growth of fish. Atlantic cod (Gadus morhua) larvae have better growth and development performance when fed natural zooplankton as a start-feed, as compared with those fed typical aquaculture start-feeds. In our experiment, two groups of Atlantic cod larvae were fed reference feed (zooplankton, mostly copepods, filtered from a seawater pond) v. aquaculture feeds: enriched rotifers (Brachionus sp.) and later brine shrimp (Artemia salina). We examined the miRNA expressions of six defined developmental stages as determined and standardised by body length from first feeding for both diet groups. We found eight miRNA (miR-9, miR-19a, miR-130b, miR-146, miR-181a, miR-192, miR-206 and miR-11240) differentially expressed between the two feeding groups in at least one developmental stage. We verified the next-generation sequencing data using real-time RT-PCR. We found 397 putative targets (mRNA) to the differentially expressed miRNA; eighteen of these mRNA showed differential expression in at least one stage. The patterns of differentially expressed miRNA and their putative target mRNA were mostly inverse, but sometimes also concurrent. The predicted miRNA targets were involved in different pathways, including metabolic, phototransduction and signalling pathways. The results of this study provide new nutrigenomic information on the potential role of miRNA in mediating nutritional effects on growth during the start-feeding period in fish larvae. PMID:26857476

  17. On the Non-Compliance in the North Sea Cod Stock

    Directory of Open Access Journals (Sweden)

    Manel Antelo

    2013-05-01

    Full Text Available This paper estimates the economic value of the North Sea cod (Gadus morhua stock under recent catch and several recovery scenarios. The research presents results on: a what the value of catches and biomass would have been if the EU fishing fleet had followed the International Council for the Exploration of the Sea scientific recommendations (SRs and Total Allowable Catches (TACs in the 1986–2010 period; and b what the value of catches and biomass will be for the 2010–2022 period if the fleet follows the current Common Fisheries Policy Reform (CFPR. Results show that the actual economic value of the stock for the 1986–2010 period has been US$7 billion, which is substantially lower than what would have been predicted had the industry followed the SRs (US$20.7 billion or approved TACs (US$19.5 billion. Similarly, if catches do not follow the SRs or the approved TACs for the 2010–2022 period the estimated economic value of the stock is predicted to be lower than if they had done so. Further, the losses of non-compliance increase even when a scenario of 50% reduction of discards under the new CFPR is considered. We also show that the status of the stock is strongly dependent on the trade-offs generated by both the non-compliance of scientific recommendations and by the short-term economic incentives of the fishing industry. With most fishery resources fully exploited or overexploited in Europe, opportunities for development lie primarily in restoring depleted stocks and catching fish more efficiently, as is the case of the North Sea cod stock.

  18. AFSC/REFM: Pacific cod Localized Depletion Study

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data from Localized Depletion study for Pacific cod 2001-2005. Study was conducted using cod pot gear to measure localized abundance of Pacific cod inside and...

  19. Linking size and age at sexual maturation to body growth, productivity and recruitment of Atlantic cod stocks spanning the North Atlantic

    DEFF Research Database (Denmark)

    Köster, Fritz; Trippel, E.A.; Tomkiewicz, Jonna

    2013-01-01

    Sexual maturation patterns of 22 North Atlantic stocks of cod (Gadus morhua) were examined and related to geographical distribution area, ambient water temperature, growth and surplus production. Four patterns were identified, i.e. sexual maturation early in life at small size, early in life at...... large size, late in life at small size and lastly, late in life at large size. These maturation patterns were geographically clustered and associated with differences in growth and surplus production. Stocks maturing late in life at small size were characterised by slow growth and low surplus production...... production (e.g. Iceland, North East Arctic), while stocks maturing early in life at small size generally showed intermediate growth and surplus production (e.g. Baltic stocks). Production of recruits per unit biomass showed a latitudinal trend, but appeared largely independent of maturation pattern, growth...

  20. EAARL Topography-Cape Cod National Seashore

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Elevation maps (also known as Digital Elevation Models or DEMs) of Cape Cod National Seashore were produced from remotely-sensed, geographically-referenced...

  1. Teachers Avoiding Learners' Avoidance: Is It Possible?

    Science.gov (United States)

    Tadayyon, Maedeh; Zarrinabadi, Nourollah; Ketabi, Saeed

    2016-01-01

    Dealing with learners who prefer to take the back seat and avoid classroom participation can be every teacher's nightmare. This lack of participation may cause teacher frustration, and possibly the only way to reduce this lack of participation is to access the concept of avoidance strategy. Avoidance strategy is the abandonment of a classroom task…

  2. Development of Radiation-Sterilized Sea Food Products. I. Enzyme-Inactivated Cod and Halibut Patties

    International Nuclear Information System (INIS)

    Radiation-sterilized enzyme-inactivated cod (Gadus macrocephalus) and halibut (Hippoglossus stenolepsis) patties or cakes were developed which show promise as commercial products. They were prepared by incorporating the comminuted fish with white corn meal, gelatin, and salt and forming the mixture into sausages. Enzymes were inactivated by heating the sausages in a boiling water-bath. After cooling overnight to set the protein, the sausages were sliced into 3/8-in-thick patties, packed in cans and given a radiation dose of 4.5 Mrad. The radiation sterilized products were stored for 12 months at 72°F with periodic evaluations to assess the quality and the effect of various treatments. The treatments included vacuum packing, the addition of various antioxidants, and the use of charcoal packets. The products just prior to serving were dipped in batter and breading and deep-fried. The fish patties were evaluated by flavorpanels and objective measurements, such as total volatile bases, 2-thiobarbituric acid number, pH and colorrreflectance values. The products received acceptable flavor scores from preference panels (140 to 170 judges) during twelve months of storage at 72°F. Although the panels preferred the non-irradiated control samples to the irradiated samples after 12 months, all stored irradiated patties scored on the ''like'' side of the 9-point hedonic scale. The color-reflectance values of radiation-sterilized seafood products can be used as a measure of the radiation-induced browning and seemed to correlate with length of storage. (author)

  3. Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature.

    Science.gov (United States)

    Bradbury, Ian R; Hubert, Sophie; Higgins, Brent; Borza, Tudor; Bowman, Sharen; Paterson, Ian G; Snelgrove, Paul V R; Morris, Corey J; Gregory, Robert S; Hardie, David C; Hutchings, Jeffrey A; Ruzzante, Daniel E; Taggart, Chris T; Bentzen, Paul

    2010-12-22

    Despite the enormous economic and ecological importance of marine organisms, the spatial scales of adaptation and biocomplexity remain largely unknown. Yet, the preservation of local stocks that possess adaptive diversity is critical to the long-term maintenance of productive stable fisheries and ecosystems. Here, we document genomic evidence of range-wide adaptive differentiation in a broadcast spawning marine fish, Atlantic cod (Gadus morhua), using a genome survey of single nucleotide polymorphisms. Of 1641 gene-associated polymorphisms examined, 70 (4.2%) tested positive for signatures of selection using a Bayesian approach. We identify a subset of these loci (n=40) for which allele frequencies show parallel temperature-associated clines (p<0.001, r2=0.89) in the eastern and western north Atlantic. Temperature associations were robust to the statistical removal of geographic distance or latitude effects, and contrasted 'neutral' loci, which displayed no temperature association. Allele frequencies at temperature-associated loci were significantly correlated, spanned three linkage groups and several were successfully annotated supporting the involvement of multiple independent genes. Our results are consistent with the evolution and/or selective sweep of multiple genes in response to ocean temperature, and support the possibility of a new conservation paradigm for non-model marine organisms based on genomic approaches to resolving functional and adaptive diversity. PMID:20591865

  4. Sediments of Cape Cod Bay, Massachusetts (HOUGH42 shapefile)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Cape Cod Bay, lying on the Massachusetts coast partly enclosed by Cape Cod, is in a glaciated region of low relief. Coarse sediments generally occur in areas...

  5. Particulate COD balance of particulate cod in eletrocuagulation/flotation reactor treating tannery effluent

    OpenAIRE

    Rodrigo Babora Borri; Renata Medici Frayne Cuba; Francisco Javier Cuba Teran

    2012-01-01

    Mass balance or particulate organic matter was studied in terms of COD, by means of electrocoagulation/flotation (ECF) reactor treating tannery effluent. Reactor was operated in fill and draw (batch) mode. Operating in hydraulic residence time of 65 minutes, ECF reactor reached 55 % COD removal. Although volatile solids were also removed from liquid phase (removal of 40%), fixed solids concentration, and hence total solids concentration, showed to be higher in withdrawn effluent than in ECF’s...

  6. The use of multibeam and split-beam echo sounders for assessing biomass and distribution of spring-spawning Atlantic cod in the Gulf of Maine

    Science.gov (United States)

    Gurshin, Christopher William Damon

    This research focused on advancing the application of split-beam and multibeam echo sounding to remotely locate and describe spatial distribution, and to provide a relative measure of abundance of the spring-spawning Atlantic cod (Gadus morhua) in the western Gulf of Maine. Specifically, the main objectives of this research were 1) to test the feasibility of a multibeam echo sounder to detect changes in volume backscatter proportional to incrementally decreasing quantities of cod held in a submerged cage, and to compare results to a split-beam echo sounder; 2) to describe the spatio-temporal distribution and estimate biomass of spring-spawning cod in the Gulf of Maine cod spawning protection area (GOMCSPA) by repeated acoustic and trawl surveys; and 3) to determine a predictive relation between target strength and length for 38-kHz and 120-kHz split-beam echo sounders and a 300-kHz multibeam echo sounder, and characterize other factors affecting backscattering of sound. The multibeam echo sounder detected a small and large reduction in volume backscatter proportional to reductions in stocking density of caged cod, while the split-beam echo sounder only detected a large reduction in stocking density. The spatial information from the multibeam echo sounder helped interpret and explain results from the split-beam echo sounder. Repeated acoustic and trawl surveys showed cod were relatively widespread in the survey area in May, but congregated at higher densities in areas adjacent to two elevated bathymetric features. Most cod converged to a single location in June, and were at a higher concentration than observations in May. This congregation decreased in size and density in July. Survey estimates of cod biomass ranged 184-494 mt in May, 138-617 mt in June, and 39-135 mt in July, depending on the estimation method. Based on echo classification and extrapolation, cod biomass to the GOMCSPA ranged 260-466 mt in May, 196-513 mt in June, and 91-198 mt in July. The biomass

  7. Particulate COD balance of particulate cod in eletrocuagulation/flotation reactor treating tannery effluent

    Directory of Open Access Journals (Sweden)

    Rodrigo Babora Borri

    2012-04-01

    Full Text Available Mass balance or particulate organic matter was studied in terms of COD, by means of electrocoagulation/flotation (ECF reactor treating tannery effluent. Reactor was operated in fill and draw (batch mode. Operating in hydraulic residence time of 65 minutes, ECF reactor reached 55 % COD removal. Although volatile solids were also removed from liquid phase (removal of 40%, fixed solids concentration, and hence total solids concentration, showed to be higher in withdrawn effluent than in ECF’s influent. This was assigned to NaCl added in order to enhance conductivity in wastewater.

  8. A study of lipid- and water-soluble arsenic species in liver of Northeast Arctic cod (Gadus morhua) containing high levels of total arsenic

    DEFF Research Database (Denmark)

    Sele, Veronika; Sloth, Jens Jørgen; Julshamn, Kale;

    2015-01-01

    -soluble species. Arsenic speciation analysis of the lipid-soluble fractions of the livers, using reversed-phase high performance liquid chromatography coupled to inductively coupled plasma mass spectrometry (HPLC-ICP-MS), revealed the presence of several arsenolipids. Three major arsenic-containing hydrocarbons...... concentrations in the lipid fractions ranged from 1.8 to 16.4 mg As/kg oil of liver, and a linear correlation (r(2) = 0.80, p

  9. A nuclear DNA basis for shelf- and bank scale population structure in northwest Atlantic cod ( Gadus morhua ) : Labrador to Georges Bank

    DEFF Research Database (Denmark)

    Ruzzante, D.E.; Taggart, C.T.; Cook, D.

    1998-01-01

    -ST measures of population structure, differences are revealed among populations at continental shelf scales (NE Newfoundland Shelf, Grand Banks, Flemish Cap, Scotian Shelf, Georges Bank) where regions are separated by submarine saddles, channels and trenches. However, we also provide evidence of genetic...

  10. Changes in regional brain monoaminergic activity and temporary down-regulation in stress response from dietary supplementation with l-tryptophan in Atlantic cod (Gadus morhua)

    DEFF Research Database (Denmark)

    Basic, D.; Schjolden, J.; Krogdahl, A.;

    2013-01-01

    The brain monoamines serotonin (5-hydroxytryptamine; 5-HT) and dopamine (DA) both play an integrative role in behavioural and neuroendocrine responses to challenges, and comparative models suggest common mechanisms for dietary modulation of transmission by these signal substances in vertebrates...

  11. Validation of selective ion flow tube mass spectrometry for fast quantification of volatile bases produced on Atlantic cod (Gadus morhua)

    OpenAIRE

    Noseda, B.; Ragaert, P.; Pauwels, D.; Anthierens, T.; Van Langenhove, H.; J. Dewulf; Devlieghere, F.

    2010-01-01

    Selective ion flow tube mass spectrometry (SIFT-MS) is a direct mass spectrometric technique that allows qualitative and quantitative analysis of a large number of volatile organic compounds. Because of its speed and ease of use, this nondestructive technique could be considered as a practical tool for quality control. This research focuses on the possibilities of direct headspace sampling by SIFT-MS for the quantification of the volatile basic nitrogen content (TVB-N) of fish fillets. These ...

  12. Could Seals Prevent Cod Recovery in the Baltic Sea?

    DEFF Research Database (Denmark)

    Mackenzie, Brian Royce; Eero, Margit; Ojaveer, Henn

    2011-01-01

    ecosystem that likely will change due to both the already started recovery of a cod predator, the grey seal Halichoerus grypus, and projected climate impacts. Simulation modelling, assuming increased seal predation, fishing levels consistent with management plan targets and stable salinity, shows that the...... cod population could reach high levels well above the long-term average. Scenarios with similar seal and fishing levels but with 15% lower salinity suggest that the Baltic will still be able to support a cod population which can sustain a fishery, but biomass and yields will be lower. At present...... knowledge of cod and seal interactions, seal predation was found to have much lower impact on cod recovery, compared to the effects of exploitation and salinity. These results suggest that dual management objectives (recovery of both seal and cod populations) are realistic but success in achieving these...

  13. Cape Cod, Buzzard's Bay, Massachusetts, USA

    Science.gov (United States)

    1990-01-01

    Cape Cod, Massachusetts, USA (42.0N, 70.0W) is a national seashore recreation area with many fine resorts and summer estate homes. Geologically, the cape is a deposit of earth and stone called a terminal moraine, left by the great Pleistocene glaciers of about 20,000 years ago. The through canal at the base of the cape is a manmade feature for waterborne traffic and is part of the Intercoastal Canal network. The cape actually begins south of the canal.

  14. Study on Enzymatic Hydrolysis of Gadus morrhua Skin Collagen and Molecular Weight Distribution of Hydrolysates

    Institute of Scientific and Technical Information of China (English)

    HUO Jian-xin; ZHAO Zheng

    2009-01-01

    Process parameters on enzymatic hydrolysis and molecular weight (MW) distribution of collagen hydrolysates from Gadus morrhua skin were investigated.The optimal process parameters were obtained by the single-factor and orthogonal experiments.The molecular weight distribution of hydrolysates was determined using both Sephadex G25 partition and high speed liquid chromatography electricity spray mass spectrum (HPLC-ESI-MS).Collagen hydrolysates were first gained by an alkaline protease "alcalase" for 3 h at temperature (50℃),pH (10.0),substrate concentration (75 g L-1),and E/S (3%).The molecular weight distribution of collagen hydrolysates ranged from 300 to 1 500 Da,and most of peptides were under 1 200 Da.Sephadex G25 partition and HPLC-ESI-MS should be successfully employed to determine the molecular weight distribution of collagen hydrolysates.

  15. Avoidant personality disorder

    Science.gov (United States)

    ... Names Personality disorder - avoidant References American Psychiatric Association. Diagnostic and statistical manual of mental disorders. 5th ed. Arlington, VA: American Psychiatric Publishing. 2013. ...

  16. Avoidable mortality in Lithuania.

    OpenAIRE

    Gaizauskiene, A.; Gurevicius, R

    1995-01-01

    STUDY OBJECTIVE--The study aimed to analyse avoidable mortality in Lithuania as an index of the quality of health care and to assess trends in avoidable mortality from 1970-90. SETTING AND PARTICIPANTS--All deaths of Lithuanian residents aged between 0 and 64 years between 1970 and 1990 were analysed. MEASUREMENTS AND MAIN RESULTS--Twenty seven per cent of all deaths in this age group were avoidable. Avoidable deaths were grouped into preventable and treatable ones. Treatable causes of death ...

  17. Biogeochemical analysis of ancient Pacific Cod bone suggests Hg bioaccumulation was linked to paleo sea level rise and climate change

    Directory of Open Access Journals (Sweden)

    Maribeth S. Murray

    2015-02-01

    Full Text Available Deglaciation at the end of the Pleistocene initiated major changes in ocean circulation and distribution. Within a brief geological time, large areas of land were inundated by sea-level rise and today global sea level is 120 m above its minimum stand during the last glacial maximum. This was the era of modern sea shelf formation; climate change caused coastal plain flooding and created broad continental shelves with innumerable consequences to marine and terrestrial ecosystems and human populations. In Alaska, the Bering Sea nearly doubled in size and stretches of coastline to the south were flooded, with regional variability in the timing and extent of submergence. Here we suggest how past climate change and coastal flooding are linked to mercury bioaccumulation that could have had profound impacts on past human populations and that, under conditions of continued climate warming, may have future impacts. Biogeochemical analysis of total mercury (tHg and 13C/15N ratios in the bone collagen of archaeologically recovered Pacific Cod (Gadus macrocephalus bone shows high levels of tHg during early/mid-Holocene. This pattern cannot be linked to anthropogenic activity or to food web trophic changes, but may result from natural phenomena such as increases in productivity, carbon supply and coastal flooding driven by glacial melting and sea-level rise. The coastal flooding could have led to increased methylation of Hg in newly submerged terrestrial land and vegetation. Methylmercury is bioaccumulated through aquatic food webs with attendant consequences for the health of fish and their consumers, including people. This is the first study of tHg levels in a marine species from the Gulf of Alaska to provide a time series spanning nearly the entire Holocene and we propose that past coastal flooding resulting from climate change had the potential to input significant quantities of Hg into marine food webs and subsequently to human consumers.

  18. Optimization and comparison of miniaturized extraction techniques for PAHs from crude oil exposed Atlantic cod and haddock eggs.

    Science.gov (United States)

    Sørensen, Lisbet; Silva, Marta S; Booth, Andy M; Meier, Sonnich

    2016-02-01

    Two miniaturized extraction methods for a wide range of 2-6 ring polycyclic aromatic hydrocarbons (PAHs) and their alkylated homologues in small lipid-rich biota samples (≤100 mg) have been developed. Both methods utilize liquid extraction (LE) prior to a clean-up step using either normal phase solid phase extraction (SPE) or mixed-phase dispersive SPE (dSPE). Optimization of the methods was achieved by comparing the type and amount of sorbents, drying agents, and solvents used. In order to improve the limits of detection (LOD) of target PAHs under high sensitivity gas chromatography-tandem mass spectrometry analysis, specific emphasis was given to minimizing lipid co-extraction. The optimized LE-SPE method comprised extraction with dichloromethane/n-hexane (1:1, v/v) and clean-up by silica SPE, whereas the optimized LE-dSPE method comprised extraction with acetonitrile and clean-up with PSA and C18 sorbents. The methods were validated and directly compared through the analysis of Atlantic cod (Gadus morhua) and haddock (Melanogrammus aeglefinus) eggs exposed to oil. The LE-SPE method resulted in lower levels of co-extracted lipids (14.1 ± 1.7 ng/μL) than the LE-dSPE method (60 ± 14 ng/μL). Achieved PAH LODs for the LE-SPE method were typically an order of magnitude lower (oil (~1-10 μg/L total PAHs). PMID:26677025

  19. The eastern Baltic cod fishery: a fleet-based management strategy evaluation framework to assess the cod recovery plan of 2008

    DEFF Research Database (Denmark)

    Bastardie, Francois; Nielsen, J. Rasmus; Kraus, Gerd

    2010-01-01

    The eastern Baltic cod fishery: a fleet-based management strategy evaluation framework to assess the cod recovery plan of 2008. - ICES Journal of Marine Science, 67: 71-86.......The eastern Baltic cod fishery: a fleet-based management strategy evaluation framework to assess the cod recovery plan of 2008. - ICES Journal of Marine Science, 67: 71-86....

  20. Extracellular glucose supports lactate production but not aerobic metabolism in cardiomyocytes from both normoglycemic Atlantic cod and low glycemic short-horned sculpin.

    Science.gov (United States)

    Clow, Kathy A; Short, Connie E; Driedzic, William R

    2016-05-01

    Fish exhibit a wide range of species-specific blood glucose levels. How this relates to glucose utilization is yet to be fully realized. Here, we assessed glucose transport and metabolism in myocytes isolated from Atlantic cod (Gadus morhua) and short-horned sculpin (Myoxocephalus scorpius), species with blood glucose levels of 3.7 and 0.57 mmol l(-1), respectively. Glucose metabolism was assessed by the production of (3)H2O from [2-(3)H]glucose. Glucose metabolism was 3.5- to 6-fold higher by myocytes from Atlantic cod than by those from short-horned sculpin at the same level of extracellular glucose. In Atlantic cod myocytes, glucose metabolism displayed what appears to be a saturable component with respect to extracellular glucose, and cytochalasin B inhibited glucose metabolism. These features revealed a facilitated glucose diffusion mechanism that accounts for between 30% and 55% of glucose entry at physiological levels of extracellular glucose. Facilitated glucose diffusion appears to be minimal in myocytes for short-horned sculpin. Glucose entry by simple diffusion occurs in both cell types with the same linear relationship between glucose metabolism and extracellular glucose concentration, presumably due to similarities in membrane composition. Oxygen consumption by myocytes incubated in medium containing physiological levels of extracellular glucose (Atlantic cod 5 mmol l(-1), short-horned sculpin 0.5 mmol l(-1)) was similar in the two species and was not decreased by cytochalasin B, suggesting that these cells have the capability of oxidizing alternative on-board metabolic fuels. Cells produced lactate at low rates but glycogen levels did not change during the incubation period. In cells from both species, glucose utilization assessed by both simple chemical analysis of glucose disappearance from the medium and (3)H2O production was half the rate of lactate production and as such extracellular glucose was not available for oxidative metabolism

  1. Intense habitat-specific fisheries-induced selection at the molecular Pan I locus predicts imminent collapse of a major cod fishery.

    Directory of Open Access Journals (Sweden)

    Einar Arnason

    Full Text Available Predation is a powerful agent in the ecology and evolution of predator and prey. Prey may select multiple habitats whereby different genotypes prefer different habitats. If the predator is also habitat-specific the prey may evolve different habitat occupancy. Drastic changes can occur in the relation of the predator to the evolved prey. Fisheries exert powerful predation and can be a potent evolutionary force. Fisheries-induced selection can lead to phenotypic changes that influence the collapse and recovery of the fishery. However, heritability of the phenotypic traits involved and selection intensities are low suggesting that fisheries-induced evolution occurs at moderate rates at decadal time scales. The Pantophysin I (Pan I locus in Atlantic cod (Gadus morhua, representing an ancient balanced polymorphism predating the split of cod and its sister species, is under an unusual mix of balancing and directional selection including current selective sweeps. Here we show that Pan I alleles are highly correlated with depth with a gradient of 0.44% allele frequency change per meter. AA fish are shallow-water and BB deep-water adapted in accordance with behavioral studies using data storage tags showing habitat selection by Pan I genotype. AB fish are somewhat intermediate although closer to AA. Furthermore, using a sampling design covering space and time we detect intense habitat-specific fisheries-induced selection against the shallow-water adapted fish with an average 8% allele frequency change per year within year class. Genotypic fitness estimates (0.08, 0.27, 1.00 of AA, AB, and BB respectively predict rapid disappearance of shallow-water adapted fish. Ecological and evolutionary time scales, therefore, are congruent. We hypothesize a potential collapse of the fishery. We find that probabilistic maturation reaction norms for Atlantic cod at Iceland show declining length and age at maturing comparable to changes that preceded the collapse of

  2. 78 FR 32612 - Collect on Delivery (COD)-Service Features

    Science.gov (United States)

    2013-05-31

    ... From the Federal Register Online via the Government Publishing Office POSTAL SERVICE 39 CFR Part 111 Collect on Delivery (COD)--Service Features AGENCY: Postal Service\\TM\\. ACTION: Proposed rule... collect on delivery (COD) service to mail an article for which the mailer has not been paid and have...

  3. Characterization of bone from red salmon and Pacific cod frames

    Science.gov (United States)

    The 2008 estimated harvests of Pacific cod and all salmon species from Alaska waters was 207,000 mt and 322,000 mt, respectively. If all the harvest would be processed to boneless fillets it is estimated the amounts of frames produced would be 37,000 mt from cod and 58,000 mt from salmon. There is ...

  4. A sensometric approach to cod-quality measurement

    DEFF Research Database (Denmark)

    Jensen, H.S.; Jørgensen, Bo

    1997-01-01

    The quality index method was used for describing the sensory quality of thawed whole cod and raw fillet and the quality of boiled fillet was assessed by profiling analysis. These data were compared to the water holding capacity of the minced cod by principal component analysis (PCA) and partial...

  5. Distribution of water in fresh cod

    DEFF Research Database (Denmark)

    Andersen, Charlotte Møller; Rinnan, A.

    2002-01-01

    Low-field (1)H nuclear magnetic resonance (NMR) transverse relaxation was used to measure water mobility and distribution of water in fresh cod fillets. The NMR relaxations were analysed with the so-called SLICING method giving uni-exponential profiles from which the transverse relaxation time (T(2......)-values) and the relative sizes of the water populations were calculated. Two water populations with the T(2)-values of 50 and 94 ms were obtained. The shortest relaxation time was primarily found near the head, and water with the longest relaxation time was primarily found near the tail. This variation...... can he explained by the smaller muscle cells and muscle fibers in the tail, which may influence the distributions of water into the different pools. The amount of one of the water populations was correlated to the overall water content with a correlation coefficient of -0.94. (C) 2002 Elsevier Science...

  6. The effects of pre-salting methods on salt and water distribution of heavily salted cod, as analyzed by 1H and 23Na MRI, 23Na NMR, low-field NMR and physicochemical analysis

    DEFF Research Database (Denmark)

    Guðjónsdóttir, María; Traoré, Amidou; Jónsson, Ásbjörn;

    2015-01-01

    The effect of different pre-salting methods (brine injection with salt with/without polyphosphates, brining and pickling) on the water and salt distribution in dry salted Atlantic cod (Gadus morhua) fillets was studied with proton and sodium NMR and MRI methods, supported by physicochemical...... analysis of salt and water content as well as water holding capacity. The study indicated that double head brine injection with salt and phosphates lead to the least heterogeneous water distribution, while pickle salting had the least heterogeneous salt distribution. Fillets from all treatments contained...... spots with unsaturated brine, increasing the risk of microbial denaturation of the fillets during storage. Since a homogeneous water and salt distribution was not achieved with the studied pre-salting methods, further optimizations of the salting process, including the pre-salting and dry salting steps...

  7. Productivity responses of a widespread marine piscivore, Gadus morhua, to oceanic thermal extremes and trends

    DEFF Research Database (Denmark)

    Mantzouni, Irene; MacKenzie, Brian

    2010-01-01

    in latitude and temperature. Here we use meta-analytical methods to investigate how recruitment (i.e. the number of new fish produced by spawners in a given year which subsequently grow and survive to become vulnerable to fishing gear) has reacted to temperature fluctuations, and in particular to...... extremes of temperature, in cod populations throughout the north Atlantic. Temperature has geographically explicit effects on cod recruitment. Impacts differ depending on whether populations are located in the upper (negative effects) or in the lower (positive effects) thermal range. The probabilities of...... successful year-classes in populations living in warm areas is on average 34 per cent higher in cold compared with warm seasons, whereas opposite patterns exist for populations living in cold areas. These results have implications for cod dynamics, distributions and phenologies under the influence of ocean...

  8. Antidepressant and Anxiolytic Effects of Cod Liver Oil in Rats

    Directory of Open Access Journals (Sweden)

    Tahira Perveen*, Faiza Razi, Saida Haider, Hina Qayyum and Darakhshaan J. Haleem

    2013-01-01

    Full Text Available Cod-liver oil is a rich source of omega 3 fatty acids and has been widely used as omega 3 fatty acids supplementation. Regarding omega-3 fatty acid beneficial effects in humans, this study was designed to investigate the effect of repeated administration of cod-liver oil on the locomotion and behaviors of rats, including depression, anxiety and the 5-Hydroxy tryptamine (5-HT metabolism. After four weeks oral administration of cod-liver oil, open field test was used to measure the locomotor and exploratory activity. Elevated plus maze test was used to measure anxiety. Cod-liver oil significantly increased locomotion and produced anxiolytic effects in rats. Antidepressant effect of cod-liver oil was monitored by forced swim test (FST in which struggling time of test animals was increased significantly. 5-HT turnover also increased significantly following the oral repeated administration of cod liver oil in test animals. The results suggest that cod-liver oil has antidepressant and anti-anxiety effects.

  9. Semiautomated Determination of COD in Environmental Water Samples

    OpenAIRE

    Korenaga, Takashi; Ikatsu, Hisayoshi; Moriwake, Toshio; Takahashi, Teruo

    1980-01-01

    A new method based on the principle of flow injection analysis is presented for the semiautomated determinationof chemical oxygen demand (COD) in environmental watersamples. The method is rapid and continuous, and suitablefor the monitoring of COD in wastewaters. The apparatusused was simply constructed by parts commercially availablefor high performance liquid chromatography. Teflon tubing heated with a boiling water was used as a reactor and simultaneously used for mixing coils and transmis...

  10. Antiulcer activity of cod liver oil in rats

    Directory of Open Access Journals (Sweden)

    Khare Salaj

    2008-01-01

    Full Text Available Objective: Cod liver oil is used widely as a dietary supplement. The present study was carried out to evaluate the effect of cod liver oil (0.5 g/kg, p.o. and 1 g/kg, p.o. on gastric and duodenal ulcers. Materials and Methods: The study was carried out on different gastric ulcer models such as acetic acid induced chronic gastric ulcers, pylorus ligation, indomethacin induced ulcers, stress induced ulcers and ethanol induced ulcers. The duodenal ulcers were induced using cysteamine hydrochloride (HCl. Ranitidine (50 mg/kg p.o. and misoprostol (100 µg/kg, p.o. were used as standard drugs. Results: Both doses of cod liver oil showed gastric ulcer healing effect in acetic acid induced chronic gastric ulcers, produced gastric antisecretory effect in pylorus-ligated rats and also showed gastric cytoprotective effect in ethanol-induced and indomethacin-induced ulcer. Cod liver oil also produced a significant reduction in the development of stress induced gastric ulcers and cysteamine induced duodenal ulcer. The high dose of cod liver oil (1 g/kg, p.o. was more effective compared to the low dose (0.5 g/kg, p.o.. Conclusion: Cod liver oil increases healing of gastric ulcers and prevents the development of experimentally induced gastric and duodenal ulcers in rats.

  11. Fast COD data acquisition at the SPring-8 storage ring

    International Nuclear Information System (INIS)

    A stabilization of a beam orbit is one of important topics for synchrotron radiation accelerators. A periodic correction of a closed orbit of electron beam takes central role in the beam orbit stabilization, after major causes of beam orbit fluctuations were cured. Electronics of beam position monitor at the SPring-8 storage ring, which are in operation since 2006, have capability of re-configuration in signal detection scheme, since the electronics is composed of DSP and FPGA. We reconfigured the electronics and COD data at a repetition of every 1 ms is obtained as post-process. This 1 ms COD data is analyzed and the beam orbit fluctuation was evaluated. While the post-processing data, we have been developing software for periodic correction of the beam orbit in order to shortening the period of the correction. The period was shortened from 7 sec to 1 sec since 2012 April. After that we prepared reflective memory network which have good real time property. Owing to the reflective memory network, it have become possible that the COD data is obtained at 10 Hz with real-time. Moreover, the obtained 10-Hz COD data is recorded to a database system, which is newly developed as MADOCA II control system for future SPring-8 database. We report upgrading of the hardware and software for COD measurement and status of COD correction. (author)

  12. Psychological Treatments to Avoid

    Science.gov (United States)

    Thomason, Timothy C.

    2010-01-01

    Certain psychological treatments should be avoided, and a list of such treatments would provide valuable guidance for counselors, as well as potential clients. It is well established that some therapies are potentially dangerous, and some fringe therapies are highly unlikely to help clients beyond a placebo effect. This article provides an…

  13. Avoiding the Flu

    Science.gov (United States)

    ... of this page please turn Javascript on. Feature: Flu Avoiding the Flu Past Issues / Fall 2009 Table of Contents Children ... should still get the 2009 H1N1 vaccine. H1N1 Flu: Who Should Be Vaccinated First The Centers for ...

  14. Myelin Avoids the JAM.

    Science.gov (United States)

    Follis, Rose M; Carter, Bruce D

    2016-08-17

    In this issue of Neuron, Redmond et al. (2016) identify junction adhesion molecule 2 (JAM2) as an inhibitor of somatodendritic myelination in spinal cord neurons, thereby elucidating how myelin forms on axons but avoids dendrites and cell bodies. PMID:27537479

  15. Plants to Avoid

    Science.gov (United States)

    Knowledge of poisonous plants is extremely important for home owners, gardeners, farmers, hunters, hikers, and the rest of the general public. Among the most important plants to avoid in the Delta Region are poison ivy, bull nettle, eastern black nightshade, Queen Ann’s lace, jimsonweed, and trumpe...

  16. Valorisation of codfish (Gadus morhua L.) salting processing wastewater through the extraction of high added value compounds

    OpenAIRE

    Ferraro, Vincenza

    2011-01-01

    Apesar do desenvolvimento de outros métodos de preservação, a salga do bacalhau (Gadus morhua L.) continua a ser uma realidade devido a um conjunto de factores, entre os quais a simplicidade e o baixo custo do processo bem como as características sensoriais do produto final, muito apreciadas pelos consumidores. Ao longo do processo de salga o bacalhau incorpora sal até 20% do seu peso e liberta concomitantemente cerca de 22% da sua água fisiológica; assim, aproximadamente 200 litros de águ...

  17. Assessment of Allergy to Milk, Egg, Cod, and Wheat in Swedish Schoolchildren: A Population Based Cohort Study.

    Directory of Open Access Journals (Sweden)

    Anna Winberg

    Full Text Available Knowledge about the prevalence of allergies to foods in childhood and adolescence is incomplete. The purpose of this study was to investigate the prevalence of allergies to milk, egg, cod, and wheat using reported data, clinical examinations, and double-blind placebo-controlled food challenges, and to describe the phenotypes of reported food hypersensitivity in a cohort of Swedish schoolchildren.In a population-based cohort of 12-year-old children, the parents of 2612 (96% of invited completed a questionnaire. Specific IgE antibodies to foods were analyzed in a random sample (n=695. Children reporting complete avoidance of milk, egg, cod, or wheat due to perceived hypersensitivity and without physician-diagnosed celiac disease were invited to undergo clinical examination that included specific IgE testing, a celiac screening test, and categorization into phenotypes of food hypersensitivity according to preset criteria. Children with possible food allergy were further evaluated with double-blind challenges.In this cohort, the prevalence of reported food allergy to milk, egg, cod, or wheat was 4.8%. Food allergy was diagnosed in 1.4% of the children after clinical evaluation and in 0.6% following double-blind placebo-controlled food challenge. After clinical examination, children who completely avoided one or more essential foods due to perceived food hypersensitivity were categorized with the following phenotypes: allergy (29%, outgrown allergy (19%, lactose intolerance (40%, and unclear (12%.There was a high discrepancy in the prevalence of allergy to milk, egg, cod and wheat as assessed by reported data, clinical evaluation, and double-blind food challenges. Food hypersensitivity phenotyping according to preset criteria was helpful for identifying children with food allergy.

  18. AVOIDING MANUSCRIPT MISTAKES

    OpenAIRE

    Grindstaff, Terry L.; Saliba, Susan A.

    2012-01-01

    Writing a scientific manuscript can be a consuming, but rewarding task with a number of intrinsic and extrinsic benefits. The ability to write a scientific manuscript is typically not an emphasized component of most entry‐level professional programs. The purpose of this overview is to provide authors with suggestions to improve manuscript quality and to provide mechanisms to avoid common manuscript mistakes that are often identified by journal reviewers and editors.

  19. Indonesia : Avoiding the Trap

    OpenAIRE

    World Bank

    2014-01-01

    Within the next two decades Indonesia aspires to generate prosperity, avoid a middle-income trap and leave no one behind as it tries to catch up with high-income economies. These are ambitious goals. Realizing them requires sustained high growth and job creation, as well as reduced inequality. Can Indonesia achieve them? This report argues that the country has the potential to rise and bec...

  20. Chemical oxygen demand (COD) fractions characterization of Karachi metropolitan wastewater

    International Nuclear Information System (INIS)

    To prove the hypothesis that the inert products are given to environment due to biological degradation of substrate in activated sludge operations. This study was design to investigate the inert fractions of chemical oxygen demand (COD) in metropolitan effluent. An aerobic batch reactor system was experimentally setup and maintained up to 480 hours. At the end of operations, COD compositions of metropolitan wastewater were found to be STO = 131 mg/L, XSO = 63 mg/L, CSO = 178 mg/L, SSO = 115 mg/L, SI = 16 mg/L, XI 218 mg/L, respectively. At the end of operations, COD compositions of metropolitan wastewater were found to be STO = 131 mg/L, XSO = 63 mg/L, CSO 178 mg/L, SSO = 115 mg/L, SI = 16 mg/L, XI = 218 mg/L respectively. This study is focused on inert COD fractions of metropolitan wastewater which consist of domestic as well as local industrial effluent. Soluble inert COD (SI) must be determined for discharge standards since it did not give any reaction in activated sludge system and was given with wastewater discharge. However particulate inert COD (XI) accumulated in system depending on sludge retention time due to it is only wasted from system by wasted sludge. Experimental techniques were used attained Zohu X. et al. [1, 2] in order to determine directly influent particulate and soluble inert fractions. The experimental study was carried out until COD profile reached to steady state or depletion of degradable substrate. The conventional parameters of municipal characterization were as follows: total COD (CTO) = 412 mg/L, total soluble COD (STO) = 131 mg/L, biochemical oxygen demand (BOD5) = 197 mg/L, total biochemical oxygen demand (BODt) = 351 mg/L, total suspended solids (TSS) = 264 mg/L, ammonia nitrogen (NH/sub 3/-N) = 26.6 mg/L, grease and oil (G and O) = 17.5 mg/L and pH were 7.4 SU, respectively. (author)

  1. A New Spectrophotometric Method for Measuring COD of Seawater

    Institute of Scientific and Technical Information of China (English)

    LIU Ying; JI Hongwei; XIN Huizhen; LIU Li

    2006-01-01

    This research studied a new spectrophotometric method for measuring the chemical oxygen demand (COD) of seawater. In this method, the COD was measured using a spectrophotometer instead of titrating with sodium thiosulphate.The measuring wavelength was selected to be 470 nm, and the COD of three standard glucose solutions (COD = 0.5, 1.5 and2.5 mgL-1, respectively) and two seawater samples (from the South Yellow Sea and Jiaozhou Bay) were measured using the spectrophotometric method and titrimetric method respectively. The results showed that the spectrophotometric method was somewhat better than the titrimetric method. The relative standard deviation (RSD) of the spectrophotometric method was less than 2.7%, and the recovery of seawater samples ranged from 96.3% to 103.8%. In addition, the spectrophotometric method has other advantages such as expeditiousness, operation simplicity, analysis automatization, etc. Therefore the spectrophotometric method can be used to measure the COD of seawater with satisfactory results.

  2. Analysis of the origin of soluble COD in Lake Sanaru

    Directory of Open Access Journals (Sweden)

    Yu Qian

    2016-01-01

    Full Text Available This study intends to investigate the origin of Sol-COD by analyzing the water quality data and the amount of detergent consumption in the Lake Sanaru region,located at Hamamatsu City in Japan. It was found that there is a correlation between the total COD in the lake and the sewer coverage in the upstream region of Lake Sanaru. This fact implies that the water quality of upstream rivers receiving untreated wastewater from homes would greatly affect the water quality of the lake. Since the value of Sol-COD in the rivers is close to that of Lake Sanaru, the main origin of the Sol-COD was supposed to be the organic components in the river water especially those of detergents, because the Sol-CODof detergent didn’t decompose completely.Thus, the amount of detergent emitted in the upstreamlakeregion was determined using the public data of the pollution from the sewer system and the national average of detergent consumption. The calculated value of the detergent concentration agreed very well with the one measured in the upstream rivers, meaning that detergents strongly affected water quality in upstream rivers and also the majority of Sol-COD in Lake Sanaru.

  3. Determination of humic acid in alkali leaching solution of uranium by spectophotrometry-COD method

    International Nuclear Information System (INIS)

    It is one of the main causes of extraction emulsification or resin toxicosis during alkali leaching process in uranium metallurgy which organic matters including humic acid exist in lixiviums. In order to study the effect of humic acid in uranium metallurgy, a method for determination of content of humic acid in aqueous solution need to be established. Spectrophotometry is a simple and convenient method in humic acid analysis. However, accuracy of spectrophotometry can be reduced greatly because of interference of uranium and other elements in the humic acid solutions. Although chemical oxygen demand (COD) method is a common analysis way of organic matters in aqueous solutions, the concentration of humic acid cannot be directly measured. In this paper, COD method is related with spectrophotometry to avoid the interference of uranium and ensure the accurate analysis of humic acid. The results showed that the detection limit of the method was 1.78 mg/L and the recovery rate was 101.2%. (authors)

  4. On partitions avoiding right crossings

    OpenAIRE

    Yan, Sherry H. F.; Xu, Yuexiao

    2011-01-01

    Recently, Chen et al. derived the generating function for partitions avoiding right nestings and posed the problem of finding the generating function for partitions avoiding right crossings. In this paper, we derive the generating function for partitions avoiding right crossings via an intermediate structure of partial matchings avoiding 2-right crossings and right nestings. We show that there is a bijection between partial matchings avoiding 2-right crossing and right nestings and partitions...

  5. COD removal characteristics in air-cathode microbial fuel cells

    KAUST Repository

    Zhang, Xiaoyuan

    2015-01-01

    © 2014 Elsevier Ltd. Exoelectrogenic microorganisms in microbial fuel cells (MFCs) compete with other microorganisms for substrate. In order to understand how this affects removal rates, current generation, and coulombic efficiencies (CEs), substrate removal rates were compared in MFCs fed a single, readily biodegradable compound (acetate) or domestic wastewater (WW). Removal rates based on initial test conditions fit first-order kinetics, but rate constants varied with circuit resistance. With filtered WW (100Ω), the rate constant was 0.18h- 1, which was higher than acetate or filtered WW with an open circuit (0.10h- 1), but CEs were much lower (15-24%) than acetate. With raw WW (100Ω), COD removal proceeded in two stages: a fast removal stage with high current production, followed by a slower removal with little current. While using MFCs increased COD removal rate due to current generation, secondary processes will be needed to reduce COD to levels suitable for discharge.

  6. Avoidable waste management costs

    International Nuclear Information System (INIS)

    This report describes the activity based costing method used to acquire variable (volume dependent or avoidable) waste management cost data for routine operations at Department of Energy (DOE) facilities. Waste volumes from environmental restoration, facility stabilization activities, and legacy waste were specifically excluded from this effort. A core team consisting of Idaho National Engineering Laboratory, Los Alamos National Laboratory, Rocky Flats Environmental Technology Site, and Oak Ridge Reservation developed and piloted the methodology, which can be used to determine avoidable waste management costs. The method developed to gather information was based on activity based costing, which is a common industrial engineering technique. Sites submitted separate flow diagrams that showed the progression of work from activity to activity for each waste type or treatability group. Each activity on a flow diagram was described in a narrative, which detailed the scope of the activity. Labor and material costs based on a unit quantity of waste being processed were then summed to generate a total cost for that flow diagram. Cross-complex values were calculated by determining a weighted average for each waste type or treatability group based on the volume generated. This study will provide DOE and contractors with a better understanding of waste management processes and their associated costs. Other potential benefits include providing cost data for sites to perform consistent cost/benefit analysis of waste minimization and pollution prevention (WMIN/PP) options identified during pollution prevention opportunity assessments and providing a means for prioritizing and allocating limited resources for WMIN/PP

  7. CodY-mediated regulation of Streptococcus pyogenes exoproteins

    Directory of Open Access Journals (Sweden)

    McDowell Emily J

    2012-06-01

    Full Text Available Abstract Background The production of Streptococcus pyogenes exoproteins, many of which contribute to virulence, is regulated in response to nutrient availability. CodY is a transcriptional regulator that controls gene expression in response to amino acid availability. The purpose of this study was to identify differences in the expression of streptococcal exoproteins associated with deletion of the codY gene. Results We compared the secreted proteins produced by wild-type S. pyogenes to a codY mutant in the post-exponential phase of growth. We used both one and two-dimensional gel electrophoresis to separate exoproteins. Proteins that were significantly different in abundance upon repeated analysis were identified with tandem mass spectrometry. The production of the secreted cysteine protease SpeB, a secreted chromosomally encoded nuclease (SdaB, and a putative adhesion factor (Spy49_0549 were more abundant in supernatant fluids obtained from the codY mutant. In addition, hyaluronidase (HylA, CAMP factor (Cfa, a prophage encoded nuclease (Spd-3, and an uncharacterized extracellular protein (Spy49_0015 were less abundant in supernatant fluids obtained from the codY mutant strain. Enzymatic assays showed greater DNase activity in culture supernatants isolated in the post-exponential phase of growth from the codY mutant strain compared to the wild-type strain. Because extracellular nucleases and proteases can influence biofilm formation, we also measured the ability of the strains to form biofilms during growth with both rich medium (Todd Hewitt yeast extract; THY and chemically defined media (CDM. No difference was observed with rich media but with CDM the biofilms formed by the codY mutant strain had less biomass compared to the wild-type strain. Conclusions Overall, the results indicate that CodY alters the abundance of a select group of S. pyogenes exoproteins, including DNases, a protease, and hylauronidase, which together may alleviate

  8. Analysis of the origin of soluble COD in Lake Sanaru

    OpenAIRE

    Yu Qian; Oomae Ayaka; Futamata Hiroyuki; Matsuda Satoshi

    2016-01-01

    This study intends to investigate the origin of Sol-COD by analyzing the water quality data and the amount of detergent consumption in the Lake Sanaru region,located at Hamamatsu City in Japan. It was found that there is a correlation between the total COD in the lake and the sewer coverage in the upstream region of Lake Sanaru. This fact implies that the water quality of upstream rivers receiving untreated wastewater from homes would greatly affect the water quality of the lake. Since the va...

  9. A hybrid cascade control scheme for the VFA and COD regulation in two-stage anaerobic digestion processes.

    Science.gov (United States)

    Méndez-Acosta, H O; Campos-Rodríguez, A; González-Álvarez, V; García-Sandoval, J P; Snell-Castro, R; Latrille, E

    2016-10-01

    A hybrid (continuous-discrete) cascade control is proposed to regulate both, volatile fatty acids (VFA) and chemical oxygen demand (COD) concentrations in two-stage (acidogenic-methanogenic) anaerobic digestion (TSAD) processes. The outer loop is a discrete controller that regulates the COD concentration of the methanogenic bioreactor by using a daily off-line measurement and that modifies the set-point tracked by inner loop, which manipulates the dilution rate to regulate the VFA concentration of the acidogenic bioreactor, estimated by continuous on-line conductivity measurements, avoiding acidification. The experimental validation was conducted in a TSAD process for the treatment of tequila vinasses during 110days. Results showed that the proposed cascade control scheme was able to achieve the VFA and COD regulation by using conventional measurements under different set-point values in spite of adverse common scenarios in full-scale anaerobic digestion processes. Microbial composition analysis showed that the controller also favors the abundance and diversity toward methane production. PMID:27474953

  10. Comparison between methods for determining residual dichromate in COD evaluation

    International Nuclear Information System (INIS)

    Three methods for determing residual dichromate in COD evaluation were compared. The methods were: volumetric titration, potentiometric titration and spectrophotometric determination. The statistical analysis did not show any significance difference among the methods. For routine analysis, the spectrophotometric method is preferable to the other two because it is shorter, easier to carry out and produces smaller amounts of toxic wasted reactants

  11. An attempt to start feed cod larvae with artificial diets

    OpenAIRE

    Huse, Ingvar

    1981-01-01

    Larval cod were fed 8 different diets based on zooplancton and hen's eggs. All but one diets were ingested, but no growth was observed. The failure of the diets to promote growth is thouqht to be related to the low digestive potential of the larval gut.

  12. Could seals prevent cod recovery in the Baltic Sea?

    DEFF Research Database (Denmark)

    MacKenzie, Brian; Eero, Margit; Ojaveer, Henn

    2011-01-01

    Fish populations are increasingly affected by multiple human and natural impacts including exploitation, eutrophication, habitat alteration and climate change. As a result many collapsed populations may have to recover in ecosystems whose structure and functioning differ from those in which they...... goals will also depend on how climate change affects cod recruitment....

  13. 78 FR 41305 - Collect on Delivery (COD)-Service Features

    Science.gov (United States)

    2013-07-10

    ... INFORMATION: The Postal Service published a notice of proposed rulemaking on May 31, 2013 (78 FR 32612-32613... 111 Collect on Delivery (COD)--Service Features AGENCY: Postal Service TM . ACTION: Final rule... proposed rule were received, the Postal Service will adopt the proposed changes to Collect on Delivery...

  14. Improvement of COD control system of NewSUBARU

    International Nuclear Information System (INIS)

    At the NewSUBARU, the response matrix calculated from an optics model had been used for a closed orbit correction (COD) program. We measured the response matrix of NewSUBARU and used it in the new program. We compared performance of the new one with that of the old one. (author)

  15. Nutritional condition and vertical distribution of Baltic cod larvae

    DEFF Research Database (Denmark)

    Grønkjær, P.; Clemmesen, C.; St. John, Michael

    lest this hypothesis, Baltic cod larvae were sampled during the spawning seasons of 1994 and 1995 with depth-resolving multiple opening/closing nets. Each larva was aged by otolith readings and its RNA/DNA ratio was determined as a measure of nutritional condition. The RNA/DNA ratios of these larvae...

  16. Quality of Cuban shark liver oil. Comparison with Icelandic cod liver oil (Calidad del aceite de hígado de tiburón cubano. Comparación con el aceite de hígado de bacalao Islandés

    Directory of Open Access Journals (Sweden)

    Cruz-Nuñez, Giselle

    2009-02-01

    measuring some chemical characteristics: content of vitamins A, D and E, dioxins, heavy metals and squalene. The content of copper and iron was used as indicators of the possible oil oxidation. The rancidity level of the oil was evaluated by sensory analysis. Dioxins and dioxin-like PCBs are very persistent chemicals responsible for the contamination in fish oils. Its content was also evaluated. Cod liver oil from Gadus morhua and other species of Gadus from South-West Iceland was also evaluated in order toestablish comparison between both oils in terms of its quality. A lowcontent of squalene was detected in Cuban shark liver oil. Its amount of vitamin E and A indicate that it can be potentially used as a nutritional supplement, contributing to a complete use of the Cuban shark’s livers. Vitamin D was not detected. Iron and copper content indicate that the oil is a good source of these minerals. Sensory analysis showed a little higher rancidity level in cod liver oil than in Cuban shark liver oil. A not high content of dioxins (3.69 ngkg-1 was detected in Cuban shark liver oil, lower that the limit permissible for crude oils, (Food Standard Agency, 2002. Dioxins like PCBs (14.3 ngkg-1 found in the oil, can be removedduring the production by purification process.

  17. Redundant Robot Can Avoid Obstacles

    Science.gov (United States)

    Homayoun, Seraji; Colbaugh, Richard; Glass, Kristin

    1991-01-01

    Simple and direct control scheme enables redundant robot to avoid obstacles in workspace. In proposed scheme, called "configuration control", degrees of freedom used to configure robot to satisfy set of inequality constraints representing avoidance of obstacles, while simultaneously making end effector follow desired trajectory. Provides capability to avoid obstacles in dynamically varying environment where apriori planning of tasks not feasible.

  18. Estimation of bacterial quality of cod fillets with the disc flotation method

    International Nuclear Information System (INIS)

    Spoilage bacteria of cod fillets were desorbed off the fillet surface by ultrasonication. Catalase activity of these bacteria was determined using the disc flotation method after selective heat inactivation of the endogenous cod catalase and then correlated with the colony forming units. The method was applied to cod fillets from ten retail sources with satisfactory results

  19. Simulation-based investigation of the paired-gear method in cod-end selectivity studies

    DEFF Research Database (Denmark)

    Herrmann, Bent; Frandsen, Rikke; Holst, René; O'Neill, F.G.

    had a small mesh cover. Thus, estimates of the selectivity parameters of the test cod-end can be made using both the paired-gear method and the covered cod-end method. These estimates are compared and, as it is assumed that the covered cod-end method is objective, we conclude that the paired...

  20. CodY of Streptococcus pneumoniae : Link between nutritional gene regulation and colonization

    NARCIS (Netherlands)

    Hendriksen, Wouter T.; Bootsma, Hester J.; Estevao, Silvia; Hoogenboezem, Theo; de Jong, Anne; de Groot, Ronald; Kuipers, Oscar P.; Hermans, Peter W. M.

    2008-01-01

    CodY is a nutritional regulator mainly involved in amino acid metabolism. It has been extensively studied in Bacillus subtilis and Lactococcus lactis. We investigated the role of CodY in gene regulation and virulence of the human pathogen Streptococcus pneumoniae. We constructed a codY mutant and ex

  1. MEST- avoid next extinction

    Science.gov (United States)

    Cao, Dayong

    2012-11-01

    Asteroid 2011 AG5 will impact on Earth in 2040. (See Donald K. Yoemans, ``Asteroid 2011 AG5 - A Reality Check,'' NASA-JPL, 2012) In 2011, The author say: the dark hole will take the dark comet to impact our solar system in 20 years, and give a systemic model between the sun and its companion-dark hole to explain why were there periodicity mass extinction on earth. (see Dayong Cao, BAPS.2011.CAL.C1.7, BAPS.2011.DFD.LA.24, BAPS.2012.APR.K1.78 and BAPS.2011.APR.K1.17) The dark Asteroid 2011 AG5 (as a dark comet) is made of the dark matter which has a space-time (as frequence-amplitude square) center- a different systemic model from solar systemic model. It can asborb the space-time and wave. So it is ``dark.'' When many dark matters hit on our earth, they can break our atom structure and our genetic code to trigger the Mass Extinction. In our experiments, consciousness can change the systematic model and code by a life-informational technology. So it can change the output signals of the solar cell. (see Dayong Cao, BAPS.2011.MAR.C1.286 and BAPS.2012.MAR.P33.14) So we will develop the genetic code of lives to evolution and sublimation, will use the dark matter to change the systemic model between dark hole and sun and will avoid next extinction.

  2. Total organic carbon (TOC) and chemical oxygen demand (COD) - Monitoring of organic pollutants in wastewater

    OpenAIRE

    Hodzic, Elvisa

    2011-01-01

    Total organic carbon (TOC) and chemical oxygen demand (COD) are two methods used for measuring organic pollutants in wastewater. Both methods are widely used but the COD method results in production of hazardous wastes, including mercury.The purpose of this study was to validate the method TOC that will replace COD and find a factor to convert TOC to COD. In this study 26 samples were analyzed from four sewage treatment plant in the municipality of Enköping.The results show that the COD metho...

  3. Cod and rainbow trout as freeze-chilled meal elements

    DEFF Research Database (Denmark)

    Jensen, Louise Helene Søgaard; Nielsen, Jette; Jørgensen, Bo;

    2010-01-01

    Meal elements' are elements of a meal, e.g. portions of pre-fried meat, sauces, frozen fish or pre-processed vegetables typically prepared industrially. The meal elements are distributed to professional satellite kitchens, where the staff can combine them into complete meals. Freeze-chilling is a...... process consisting of freezing and frozen storage followed by thawing and chilled storage. Combining the two would enable the manufacturer to produce large quantities of frozen meal elements to be released into the chill chain according to demand. We have studied the influence of freeze-chilling on the...... quality attributes of cod and rainbow trout portions. Sensory profiling and chemical analyses were used to determine the changes in quality after slow thawing and subsequent chill storage and to find the high-quality shelf life. RESULTS: Cod had a consistent and high sensory quality during the first 6...

  4. COD and Color Removal from Real Dyeing Wastewater by Ozonation.

    Science.gov (United States)

    Yang, De-min; Yuan, Jian-mei

    2016-05-01

    Ozonation of real dye wastewater for removal of color and COD reduction covering a wide range in operating parameters forms the scope of the present work. The influence of parameters such as influent pH, ozone flow rate and initial effluent concentration on ozonation efficiency has been critically examined. It has been observed from the present investigation that a maximum of COD removal efficiency of 92.5% has been achieved under optimum operating conditions (pH=11; ozone flow rate: 6×10(-3) m(3)/minute). Further the biodegradability index of the dye effluent has increased from an initial value of 0.18 to 0.49 during ozonation indicating favorable adaptation of ozonation as a primer to the biochemical technique to enhance the efficiency of biochemical treatment. PMID:27131304

  5. Endless self-avoiding walks

    OpenAIRE

    Clisby, Nathan

    2013-01-01

    We introduce a self-avoiding walk model for which end-effects are completely eliminated. We enumerate the number of these walks for various lattices in dimensions two and three, and use these enumerations to study the properties of this model. We find that endless self-avoiding walks have the same connective constant as self-avoiding walks, and the same Flory exponent $\

  6. Communication Avoiding ILU0 Preconditioner

    OpenAIRE

    Grigori, Laura; Moufawad, Sophie

    2013-01-01

    In this paper we present a communication avoiding ILU0 preconditioner for solving large linear systems of equations by using iterative Krylov subspace methods. Recent research has focused on communication avoiding Krylov subspace methods based on so called s-step methods. However there is no communication avoiding preconditioner yet, and this represents a serious limitation of these methods. Our preconditioner allows to perform s iterations of the iterative method with no communication, throu...

  7. Modelling axisymmetric cod-ends made of different mesh types

    DEFF Research Database (Denmark)

    Priour, D.; Herrmann, Bent; O'Neill, F.G.

    2009-01-01

    Cod-ends are the rearmost part of trawl fishing gears. They collect the catch, and for many important species it is where fish selection takes place. Generally speaking they are axisymmetric, and their shape is influenced by the catch volume, the mesh shape, and the material characteristics. The ...... of the netting. The software package developed to solve this problem is freely available. Comparisons are carried out with a previous model and experimental data....

  8. Crack lenghts calculation from COD measurement for cement based composites

    Czech Academy of Sciences Publication Activity Database

    Seitl, Stanislav; Hanzlovský, Radovan; Knésl, Zdeněk

    Plzeň : Západočeská univerzita v Plzni, 2012 - (Lukeš, V.; Hajžman, M.; Byrtus, M.), s. 137-140 ISBN 978-80-261-0097-3. [Applied Mechanics 2012. Plzeň (CZ), 16.04.2012-18.04.2012] R&D Projects: GA ČR(CZ) GAP104/11/0833 Institutional support: RVO:68081723 Keywords : COD * fatigue * crack propagation * Paris’ law * composites Subject RIV: JL - Materials Fatigue, Friction Mechanics

  9. COD Removal of Different Industrial Wastewater by Fenton Oxidation Process

    OpenAIRE

    Yogita Sindhi*1

    2014-01-01

    Advanced oxidation processes are possibly one of the most effective methods for the treatment of wastewater containing organic products (effluents from chemical and agrochemical industries, the textile industry, paints, dyes, etc.).Fenton process is a one of advanced oxidation process. Fenton’s process have been extensively used for the removal of COD, TOC, dyes, phenolic compounds other organic chemicals from industrial and municipal wastewater. In this study, the laboratory s...

  10. Extendable self-avoiding walks

    OpenAIRE

    Grimmett, Geoffrey R.; Holroyd, Alexander E; Peres, Yuval

    2013-01-01

    The connective constant mu of a graph is the exponential growth rate of the number of n-step self-avoiding walks starting at a given vertex. A self-avoiding walk is said to be forward (respectively, backward) extendable if it may be extended forwards (respectively, backwards) to a singly infinite self-avoiding walk. It is called doubly extendable if it may be extended in both directions simultaneously to a doubly infinite self-avoiding walk. We prove that the connective constants for forward,...

  11. Removal of COD from laundry wastewater by electrocoagulation/electroflotation

    International Nuclear Information System (INIS)

    The removal efficiency of COD in the treatment of simulated laundry wastewater using electrocoagulation/electroflotation technology is described. The experimental results showed that the removal efficiency was better, reaching to about 62%, when applying ultrasound to the electrocoagulation cell. The solution pH approached neutrality in all experimental runs. The optimal removal efficiency of COD was obtained by using the applied voltage of 5 V when considering the energy efficiency and the acceptable removal efficiency simultaneously. The Cl- concentration of less than 2500 ppm had a positive effect on the removal efficiency. The performance of the monopolar connection of electrodes was better than that of the bipolar connection in this work. In addition, the removal efficiency of using Al electrodes was higher in comparison with using Fe electrodes in the study. The highest COD removal amount per joule was found to be 999 mg dm-3 kW h-1 while using two Al electrodes, although the removal efficiency increased with the number of Al plates

  12. Removal of COD from laundry wastewater by electrocoagulation/electroflotation

    Energy Technology Data Exchange (ETDEWEB)

    Wang, C.-T. [Department of Safety Health and Environmental Engineering, Chung Hwa University of Medical Technology, Tainan County, Hsien 717, Taiwan (China)], E-mail: ctwwang@mail.hwai.edu.tw; Chou, W.-L. [Department of Safety Health and Environmental Engineering and Institute of Occupational Safety and Hazard Prevention, HungKuang University, Sha-Lu, Taichung 433, Taiwan (China); Kuo, Y.-M. [Department of Safety Health and Environmental Engineering, Chung Hwa University of Medical Technology, Tainan County, Hsien 717, Taiwan (China)

    2009-05-15

    The removal efficiency of COD in the treatment of simulated laundry wastewater using electrocoagulation/electroflotation technology is described. The experimental results showed that the removal efficiency was better, reaching to about 62%, when applying ultrasound to the electrocoagulation cell. The solution pH approached neutrality in all experimental runs. The optimal removal efficiency of COD was obtained by using the applied voltage of 5 V when considering the energy efficiency and the acceptable removal efficiency simultaneously. The Cl{sup -} concentration of less than 2500 ppm had a positive effect on the removal efficiency. The performance of the monopolar connection of electrodes was better than that of the bipolar connection in this work. In addition, the removal efficiency of using Al electrodes was higher in comparison with using Fe electrodes in the study. The highest COD removal amount per joule was found to be 999 mg dm{sup -3} kW h{sup -1} while using two Al electrodes, although the removal efficiency increased with the number of Al plates.

  13. COD FRACTIONS CHANGES DURING SEWAGE TREATMENT WITH CONSTRUCTED WETLAND

    Directory of Open Access Journals (Sweden)

    Joanna Smyk

    2015-06-01

    Full Text Available The purpose of the presented research work was to find out COD fractions in raw wastewater and during treatment with constructed wetland (CW system. The tests were performed in CW system with average flow of about 4 m3/day. In raw wastewater the highest concentration of fraction in organic suspended solid easy biodegradable (XS – 250 mg O2/l was observed. The same situation was with dissolved organic easy biodegradable matter (SS – 250 mg O2/l. Lower quantity of non-biodegradable fractions dissolved and in suspended solids were observed (SI – 27 mg O2/l, XI – 83.33 mg O2/l. More than 80% of total COD was as biodegradable fractions (SS + XS. After treatment with CW system the highest concentration was observed for dissolved non-biodegradable fraction (SI – 27 mg O2/l. Lower concentration was for biodegradable fraction in suspended solid (XS – 3.33 mg O2/l. More than 89% of total COD was in biological non-biodegradable fraction (SI + XI.

  14. Removal of ecotoxicity and COD from tank truck cleaning wastewater.

    Science.gov (United States)

    Dries, Jan; De Schepper, Wim; Geuens, Luc; Blust, Ronny

    2013-01-01

    Tank truck cleaning (TTC) activities generate highly complex wastewater. In a previous study, we found that a significant ecotoxic effect was still present in biologically treated TTC wastewater. The aim of the present study was therefore to investigate the removal of acute toxicity from TTC wastewater by a sequence of technologies routinely applied for industrial wastewater. Acute toxicity was assayed with the widely applied and standardized Vibrio fischeri bioluminescence inhibition test. During a 5-month period, raw wastewater was grab-sampled from a full-scale TTC company and treated by the different unit operations on a laboratory scale. Chemical pretreatment of the wastewater by coagulation with FeCl3 removed approx. 38% of the influent chemical oxygen demand (COD) and reduced the bioluminescence inhibition by 8%. Biological treatment with activated sludge subsequently removed another 77% of the remaining COD. This treatment step also reduced the bioluminescence inhibition but the removal efficiency varied strongly from 5 to 92% for the different samples. Powdered activated carbon almost completely removed the remaining COD and inhibition in all samples. The results suggest that conventional technologies did not suffice for complete removal of toxicity from TTC wastewater, and that advanced wastewater treatment technologies such as activated carbon are required for a satisfactory detoxification. PMID:24292468

  15. Process and Mechanism of Water-swollen Gadus Skin%鳕鱼鱼皮水发工艺及机理研究

    Institute of Scientific and Technical Information of China (English)

    赵硕; 李俊毅; 齐祥明

    2012-01-01

    [Objective] To optimize Gadus skin water-swollen process, and interpret its mechanism therein. [Method] With Gadus skin as test materials, the influences of soaking time, sodium hydroxide concentration and soaking temperature on water-swollen rate and protein loss rate were investigated, the soaking process was optimized by orthogonal experiment to study the influence' of blanching and cold shock on the crisp degree of products. [Result] Single-factor experimental results showed that the Gadus skin water-swollen rate firstly increased and then reduced with the increase of sodium hydroxide concentration, the extension of soaking time and the rising of soaking temperature. Orthogonal experimental results showed that the water-swollen rate was the highest by soaking the Gadus skin in 0.75 g/L sodium hydroxide concentration at 25 ℃ for 2. 5 hours. And the best jsrispness was obtained after 80 ℃ water bath and 3 min soaking in cold water. [ Conclusion] The study provided references for the comprehensive utilization of Gadus skin.%[目的]为优化鳕鱼皮水发生产工艺,并尝试对水发机理进行一些理论解释.[方法]以鳕鱼皮为试验原料,以水发率和蛋白损失率为指标,考察浸泡时间、NaOH溶液浓度、浸泡温度对鱼皮水发率的影响,通过正交试验对浸泡工艺进行优化,并考察了漂烫和冷激因素对产品爽脆度的影响.[结果]单因素试验结果显示,试验研究范围内,鳕鱼皮的水发率随NaOH溶液浓度的增大、浸泡时间的延长和浸泡温度的升高而先升高后下降.正交试验结果表明,鳕鱼皮在浓度为0.75 g/L的NaOH溶液中,在25℃条件下浸泡2.5h时,鱼皮的水发率最好.并且通过80℃水浴,然后冰水浸泡3 min后得到的鱼皮具有较好的爽脆度.[结论]该研究为鳕鱼皮的综合利用提供了参考依据.

  16. Prudent Self-Avoiding Walks

    Directory of Open Access Journals (Sweden)

    Anthony J. Guttmann

    2008-09-01

    Full Text Available We have produced extended series for prudent self-avoiding walks on the square lattice. These are subsets of self-avoiding walks. We conjecture the exact growth constant and critical exponent for the walks, and show that the (anisotropic generating function is almost certainly not differentiably-finite.

  17. Prudent Self-Avoiding Walks

    OpenAIRE

    Guttmann, Anthony J.; Dethridge, John C.

    2008-01-01

    We have produced extended series for prudent self-avoiding walks on the square lattice. These are subsets of self-avoiding walks. We conjecture the exact growth constant and critical exponent for the walks, and show that the (anisotropic) generating function is almost certainly not differentiably-finite.

  18. Acquaintance Rape: Effective Avoidance Strategies.

    Science.gov (United States)

    Levine-MacCombie, Joyce; Koss, Mary P.

    1986-01-01

    Determined that acknowledged and unacknowledged acquaintance rape victims and rape avoiders could be discriminated by situational variables and response strategies. Avoiders were less likely to have experienced passive or internalizing emotions at the time of the assault, perceived the assault as less violent, and were more likely to have utilized…

  19. AMMONIA AND COD REMOVAL FROM SYNTHETIC LEACHATE USING RICE HUSK COMPOSITE ADSORBENT

    Directory of Open Access Journals (Sweden)

    Azhar Abdul Halim

    2011-06-01

    Full Text Available Ammonia and chemical oxygen demand (COD were the most two problematic parameters in the landfill leachate. In this study, a new composite adsorbent derived from rice husk ash waste is evaluated with respect to its ability to remove these contaminants from synthetic leachate. Results indicate that the new composite adsorbent is able to adsorb both ammonia and COD. It has a higher adsorption capacity for ammonia (Q = 2.2578 mg/g and an almost equal adsorption capacity for COD (Q = 2.8893 when compared with commercially activated carbon. The adsorption kinetics of this new product for ammonia and COD were primarily represented by the pseudo second-order mechanism. The overall adsorption rate of the ammonia and COD adsorption processes appears to be determined by chemisorption process. The regenerated composite adsorbent indicated higher adsorption capacities of ammonia and COD, i.e. 12.9366 mg/g and 3.1162 mg/g, respectively.

  20. Implications of stock recovery for a neighbouring management unit: experience from the Baltic cod

    DEFF Research Database (Denmark)

    Eero, Margit; Hansen, Jakob Hemmer; Hüssy, Karin

    2014-01-01

    the two populations. Due to immigrating cod from the east, there are currently large spatial differences in cod abundance and mean weight in the western Baltic management unit that raise new management concerns. First, the high abundance of cod of eastern origin found in the western Baltic management...... unit can mask the relatively poor state of the western Baltic cod population. Second, the current fishing mortality estimates for the entire western Baltic management unit, used as basis for fisheries management, are difficult to interpret as these are highly influenced by mixing of biological...... also substantially increased cod abundance in a specific area of the adjacent western Baltic management unit. This is investigated through long time-series of spatially resolved stock assessment data supplemented by genetic analyses of origin of the cod currently found in the transition area between...

  1. Neuromorphic UAS Collision Avoidance Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Using biologically-inspired neuromorphic optic flow algorithms is a novel approach in collision avoidance for UAS. Traditional computer vision algorithms rely on...

  2. Panic disorder and exercise avoidance

    Directory of Open Access Journals (Sweden)

    Ricardo W. Muotri

    2014-03-01

    Full Text Available Objectives: 1 To identify whether patients with panic disorder in general and those with the respiratory subtype in particular actively avoid exercise; 2 to investigate physiological differences in cardiopulmonary function parameters in patients with panic disorder in general, patients with the respiratory subtype of panic disorder, and healthy controls upon exercise challenge. Methods: Patients with panic disorder were classified as having either the respiratory or the non-respiratory subtype. Both groups were compared to controls in terms of exercise avoidance patterns and performance on cardiopulmonary exercise testing. Results: Patients with panic disorder exhibited higher exercise avoidance scores and worse performance on cardiopulmonary exercise testing as compared with controls. No differences were found between patients with the respiratory and non-respiratory subtypes. Conclusions: Exercise avoidance is present in panic disorder and is associated with poorer performance on cardiopulmonary exercise testing. These findings are not limited to patients with the respiratory subtype of the disorder.

  3. Endless self-avoiding walks

    Science.gov (United States)

    Clisby, Nathan

    2013-06-01

    We introduce a self-avoiding walk model for which end-effects are completely eliminated. We enumerate the number of these walks for various lattices in dimensions two and three, and use these enumerations to study the properties of this model. We find that endless self-avoiding walks have the same connective constant as self-avoiding walks, and the same Flory exponent ν. However, there is no power law correction to the exponential number growth for this new model, i.e. the critical exponent γ = 1 exactly in any dimension. In addition, the number growth has no analytic corrections to scaling, and we have convincing numerical evidence to support the conjecture that the amplitude for the number growth is a universal quantity. The technique by which end-effects are eliminated may be generalized to other models of polymers such as interacting self-avoiding walks.

  4. Endless self-avoiding walks

    International Nuclear Information System (INIS)

    We introduce a self-avoiding walk model for which end-effects are completely eliminated. We enumerate the number of these walks for various lattices in dimensions two and three, and use these enumerations to study the properties of this model. We find that endless self-avoiding walks have the same connective constant as self-avoiding walks, and the same Flory exponent ν. However, there is no power law correction to the exponential number growth for this new model, i.e. the critical exponent γ = 1 exactly in any dimension. In addition, the number growth has no analytic corrections to scaling, and we have convincing numerical evidence to support the conjecture that the amplitude for the number growth is a universal quantity. The technique by which end-effects are eliminated may be generalized to other models of polymers such as interacting self-avoiding walks. (paper)

  5. Avoidable nightmare; Der vermeidbare Albtraum

    Energy Technology Data Exchange (ETDEWEB)

    Sieg, Mirco

    2010-07-01

    Failure of photovoltaic systems because of serious damage is an increasing phenomenon. Especially in older systems, faulty projecting and installation may have costly late effects. Insurance companies reckon that most cases of damage and failure could easily be avoided. (orig.)

  6. Fluorescence of muscle and connective tissue from cod and salmon

    DEFF Research Database (Denmark)

    Andersen, Charlotte Møller; Wold, J.P.

    2003-01-01

    Autofluorescence of salmon and cod muscle was measured and compared with autofluorescence of collagen type I and type V. Similarities between fluorescence of fish muscle and collagen were found in that the same peaks were obtained around 390, 430, and 480 nm, These similarities are supported by...... a scale from 0 to 5. There was no relation between texture and fluorescence spectra. Fluorescence of fish muscle could be related to the storage time. However, this relation seemed not to be induced by changes in collagen....

  7. Vision-based obstacle avoidance

    Science.gov (United States)

    Galbraith, John

    2006-07-18

    A method for allowing a robot to avoid objects along a programmed path: first, a field of view for an electronic imager of the robot is established along a path where the electronic imager obtains the object location information within the field of view; second, a population coded control signal is then derived from the object location information and is transmitted to the robot; finally, the robot then responds to the control signal and avoids the detected object.

  8. Self-avoiding quantum walks

    OpenAIRE

    Camilleri, Elizabeth; Rohde, Peter P.; Twamley, Jason

    2014-01-01

    Quantum walks exhibit many unique characteristics compared to classical random walks. In the classical setting, self-avoiding random walks have been studied as a variation on the usual classical random walk. Classical self-avoiding random walks have found numerous applications, most notably in the modeling of protein folding. We consider the analogous problem in the quantum setting. We complement a quantum walk with a memory register that records where the walker has previously resided. The w...

  9. Who participates in tax avoidance?

    OpenAIRE

    Alstadsæter, Annette; Jacob, Martin

    2013-01-01

    This paper analyzes the sources of heterogeneity in legal tax avoidance strategies across individuals. Three conditions are required for a taxpayer to participate in tax avoidance: incentive, access, and awareness. Using rich Swedish administrative panel data with a unique link between corporate and individual tax returns, we analyze individual participation in legal tax planning around the 2006 Swedish tax reform. Our results suggest that closely held corporations are utilized to facilitate ...

  10. Optimal feedback controls : comparative evaluation of the cod fisheries in Denmark, Iceland and Norway

    OpenAIRE

    Arnason, Ragnar; Sandal, Leif Kristoffer; Steinshamn, Stein Ivar; Vestergaard, Niels

    2000-01-01

    The purpose of this paper is to compare the relative efficiency of the fish harvesting policies of Iceland, Norway and Denmark. We have chosen to concentrate on the cod fishery as this is the single most important fishery in all three countries. The three nations conduct their cod fisheries in quite different contexts. First, there is a difference in national control over the respective fisheries. Iceland has been in virtual sole control of her cod fishery. Norway, on the other hand, shares h...

  11. Reproduction and winter biology of polar cod Boreogadus saida from Svalbard waters

    OpenAIRE

    Korshunova, Ekaterina

    2012-01-01

    Polar cod (Boreogadus saida) is considered to be a key species in the Arctic marine ecosystems. Yet detailed or even basic knowledge regarding its biology and adaptations, especially during the polar night, are in many cases poor. No field data is presently available on the gonad development of polar cod, its reproductive biology and associated bioenergetics. Accordingly, polar cod was sampled at different locations in Svalbard waters in August, September, November and January. Gonadosomatic ...

  12. Predator Avoidance in Extremophile Fish

    Directory of Open Access Journals (Sweden)

    Martin Plath

    2013-02-01

    Full Text Available Extreme habitats are often characterized by reduced predation pressures, thus representing refuges for the inhabiting species. The present study was designed to investigate predator avoidance of extremophile populations of Poecilia mexicana and P. sulphuraria that either live in hydrogen sulfide-rich (sulfidic springs or cave habitats, both of which are known to have impoverished piscine predator regimes. Focal fishes that inhabited sulfidic springs showed slightly weaker avoidance reactions when presented with several naturally occurring predatory cichlids, but strongest differences to populations from non-sulfidic habitats were found in a decreased shoaling tendency with non-predatory swordtail (Xiphophorus hellerii females. When comparing avoidance reactions between P. mexicana from a sulfidic cave (Cueva del Azufre and the adjacent sulfidic surface creek (El Azufre, we found only slight differences in predator avoidance, but surface fish reacted much more strongly to the non-predatory cichlid Vieja bifasciata. Our third experiment was designed to disentangle learned from innate effects of predator recognition. We compared laboratory-reared (i.e., predator-naïve and wild-caught (i.e., predator-experienced individuals of P. mexicana from a non-sulfidic river and found no differences in their reaction towards the presented predators. Overall, our results indicate (1 that predator avoidance is still functional in extremophile Poecilia spp. and (2 that predator recognition and avoidance reactions have a strong genetic basis.

  13. THE IMPACT OF FOOD WASTE DISCHARGE INTO THE MUNICIPAL SEWERAGE ON COD CONCENTRATION IN URBAN WASTEWATER IN OLSZTYN

    Directory of Open Access Journals (Sweden)

    Wojciech Janczukowicz

    2016-05-01

    Full Text Available The operators of wastewater treatment plants in Poland have been observing an increase in the concentration of raw sewage for several years. In particular for organic substances. This is the effect of water consumption reduction, restoration of the sewerage networks, growing wealth, widespread waste of food. The most serious adverse, influencing on the municipal wastewater composition is colloid mills application in gastronomical objects and the discharge of shredded food waste to sewer. That widespread behavior has been noticed and negated, in 2010 year, by the common position of GIS and the ME. Far too late, which confirms the situation observed at the Olsztyn wastewater treatment plant, where the biggest increase of COD values ​​was observed in 2008–2010. The average concentration of COD of sewage in the period 2011–2014 was almost twice higher than in 1996, real PE is close to the design value, despite the fact that the hydraulic load of the object slightly exceeded 50% of design value. Removing such large organic pollutant loads generates high costs, that could be avoided by reasonable food waste management.

  14. A review of the battle for food in the Barents Sea: cod vs. marine mammals

    OpenAIRE

    Bogstad, Bjarte; Gjøsæter, Harald; Haug, Tore; Lindstrøm, Ulf

    2015-01-01

    Cod, harp seal and minke whale are the main top predators in the Barents Sea ecosystem. In the last decade, the abundance of cod has increased considerably, and is at a record high level. In spite of this, the growth and condition of cod has remained rather stable, although some decrease is seen in size at age of large, mature cod. During the same period, the abundance of harp seals has declined whereas the minke whale stock has been at a stable level. The body condition (blubber thickness) o...

  15. Inhibition of haemoglobin-mediated lipid oxidation in washed cod muscle and cod protein isolates by Fucus vesiculosus extract and fraction

    DEFF Research Database (Denmark)

    Wang, Tao; Jonsdottir, Rosa; Kristinsson, Hordur;

    2010-01-01

    The effects of Fucus vesiculosus extract and fractions towards haemoglobin- (Hb-) catalysed lipid oxidation in washed cod muscle system and cod protein isolates during ice storage were examined. The extract and fractions were characterised in terms of total phlorotannin content (TPC), 2,2-diphenyl...... washed cod muscle and protein isolates, phlorotannin-enriched ethyl acetate (EtOAc) fraction showed higher inhibitory effect than crude 80% ethanol (EtOH) extract. The addition of oligomeric phlorotannin-rich subfraction (LH-2) separated by Sephadex LH-20 chromatography, completely inhibited the...

  16. Measurement of sewage COD and BOD using fluorescence technique

    International Nuclear Information System (INIS)

    Traditionally the biodegradable component of wastewater is measured by a series of wet chemical methods, of which the most important is considered to be the Biochemical Oxygen Demand (BOD) TEST. The BOD test is inadequate for effective and efficient process control because of the time required to complete the test (5 days) and the difficulty in achieving consistently accurate measurements. Other chemical tests such as the Chemical Oxygen Demand (COD), despite being more rapid the the Bod test, do not distinguish between 'biodegradable' and 'non-biodegradable' organic matter. We designed fluorescence instrument that was excited by UV-lamp. The biodegradable chromophoric constant species are considered to be the major contributors to the overall fluorescence within 300-600 nm (using 244 nm excitation). The total intensity of this band has been found to have a good linear correlation (r=0.99) with the COD and BOD parameters. CCD and PMT are used as the fluorescence detectors and the experimental results of correlation were compared.

  17. Treatment of COD analysis liquid wastes generated in environmental laboratories

    Directory of Open Access Journals (Sweden)

    Tatiana Mañunga

    2010-08-01

    Full Text Available COD analysis is often carried out in environmental labs. Its wastes are considered hazardous due to the content of metals such as Cr, Ag and Hg; treating these wastes is considered complex and expensive. The experimental results of metal ion precipitation in COD wastes with affordable chemical products are reported in this work. Cr (VI was chemically reduced by adding 200 mg.L-1 of glucose to Cr (III. Final Cr (VI concentration was less than 0.5 mg.L-1. Cr (III was precipitated as a metallic hydroxide by adding NaOH and Ag was reduced to less than 0.2 mg.L-1 by adding 2 g.L-1 of NaCl. Hg was reduced to less than 0.005 mg.L-1 with 10 g.L-1 of FeS. The proposed reduction-precipitation methodology allowed minimising the liquid residue’s hazardous characteristics so that it complied with the maximum allowable values established in Chapter 6, Article 74 of Decree 1594/1984 that regulates the use of water and liquid residues.

  18. Purification of Alaskan Walleye Pollock (Gadus chalcogrammus and New Zealand Hoki (Macruronus novaezelandiae Liver Oil Using Short Path Distillation

    Directory of Open Access Journals (Sweden)

    Alex C. M. Oliveira

    2014-05-01

    Full Text Available The beneficial health effects of a diet rich in n-3 long chain polyunsaturated fatty acids (n-3 LC-PUFA have been extensively researched in recent years. Marine oils are an important dietary source of n-3 LC-PUFA, being especially rich in two of the most important fatty acids of this class, EPA (eicosapentaenoic acid; 20:5n-3 and DHA (docosahexaenoic acid; 22:6n-3. Oils rich in n-3 LC-PUFA are prone to oxidation that leads to loss of product quality. Alaskan pollock (Gadus chalcogrammus Pallas, 1814 and New Zealand’s hoki (Macruronus novaezelandiae Hector, 1871 are the highest volume fisheries of their respective countries. Both produce large quantities of fishery byproducts, in particular crude or unrefined n-3 LC-PUFA containing oils. Presently these oils are used as ingredients for animal feed, and only limited quantities are used as human nutritional products. The aim of this research was to investigate the applicability of short path distillation for the purification of pollock and hoki oil to produce purified human-grade fish oil to meet quality specifications. Pollock and hoki oils were subjected to short path distillation and a significant decrease in free fatty acids and lipid oxidation (peroxide and para-anisidine values products was observed. Purified oils met the Global Organization for EPA and DHA Omega-3 (GOED standard for edible fish oils.

  19. Avoidance: grammatical or semantic causes?

    OpenAIRE

    Hulstijn, J.H.; de Marchena, E.

    1989-01-01

    This article follows up on a study by Dagut and Laufer (1985), who found that Hebrew learners of English avoid phrasal verbs, such as ‘let down’, while preferring one-word verbs, such as ‘;disappoint’, since phrasal verbs do not exist in Hebrew. A corollary derived from Dagut and Laufer's study is that Dutch learners of English would tend not to avoid English phrasal verbs, since phrasal verbs also exist in Dutch. It was hypothesized, however, that Dutch learners of English as a second langua...

  20. L’écodéveloppement participatif en question

    Directory of Open Access Journals (Sweden)

    Lucie Dejouhanet

    2010-03-01

    Full Text Available Si les politiques forestières indiennes ont évolué d’un paradigme directif à un paradigme participatif, les aires protégées sont encore gérées par des textes de loi qui privilégient la séparation entre activités humaines et espaces à protéger. L’écodéveloppement, soutenu par la Banque Mondiale, se voulait un moyen de favoriser des activités alternatives à l’exploitation des ressources et de faire participer les populations à la protection de leur environnement. Lancé en 2001 dans la réserve naturelle de Parambikulam au Kérala, ses résultats quelques années après sont peu concluants. Alors qu’un rapport de 2003 accuse le délitement social des populations concernées, cet article insiste davantage sur l’inadaptation des projets des comités d’écodéveloppement au contexte des villages ; le cliché essentialiste attaché aux populations adivasi constitue une vision a-historique qui ne permet pas de penser le développement aujourd’hui. L’écodéveloppement, s’il veut atteindre ses objectifs, doit permettre une réelle négociation entre acteurs des aires protégées et proposer des compromis réalistes entre limitation des activités et survie des populations.While Indian forest policies have evolved from a directive paradigm to a participative one, protected areas are still managed by legislative acts, which advocate a clear separation between human activities and areas to be protected. Eco-development financed by the World Bank was planned as a tool for developing alternative activities to resource exploitation and for involving local populations in environment protection through participation. Started in 2001 in the Wildlife Sanctuary of Parambikulam in Kerala, its results few years after are rather inconclusive. While a report in 2003 was accusing the social disintegration of concerned people, I am more stressing on the inappropriateness of EDC to villages’ context. The essentialist clich

  1. Estimating abundances of 0-group western Baltic cod by using pound net fisheries

    DEFF Research Database (Denmark)

    Bauer, Robert; Stepputtis, Daniel; Storr-Paulsen, Marie; Weigelt, Ronny; Hammer, Cornelius

    2010-01-01

    Nearshore 0-group western Baltic cod are frequently caught as bycatch in the commercial pound net fishery. Pound net fishermen from the Danish Isle of Funen and Lolland and the German Isle of Fehmarn have recorded their catches of small cod between September and December 2008. Abundance patterns...

  2. Application of the crack tip opening displacement method (COD) to the study of steel welded joints

    International Nuclear Information System (INIS)

    The C.O.D. method was applied to steel welded plates (steel 15 MDV-4-05 intended for pressure vessels). In order to select a welding technique, the impact strength of various welded joints at different temperatures was compared with the respective value of C.O.D. for notches located in the melted zone or in the heat affected zone

  3. Characterization of the Escherichia coli codBA operon encoding cytosine permease and cytosine deaminase

    DEFF Research Database (Denmark)

    Danielsen, S; Kilstrup, M; Barilla, K;

    1992-01-01

    The nucleotide sequence of a 3.1 kb segment carrying the cytosine deaminase gene (codA) from Escherichia coli was determined. The sequence revealed the presence of two open reading frames, the first (codB) specifying a highly hydrophobic polypeptide and the second specifying cytosine deaminase. A...

  4. Characterization of relA and codY mutants of Listeria monocytogenes: identification of the CodY regulon and its role in virulence.

    Science.gov (United States)

    Bennett, Hayley J; Pearce, David M; Glenn, Sarah; Taylor, Clare M; Kuhn, Michael; Sonenshein, Abraham L; Andrew, Peter W; Roberts, Ian S

    2007-03-01

    Listeria monocytogenes is a Gram-positive intracellular parasite and the causative organism of human listeriosis. In this article we demonstrate that L. monocytogenes encodes a functional member of the CodY family of global regulatory proteins that is responsive to both GTP and branched chain amino acids. By transcript analyses we identified the CodY regulon in L. monocytogenes and demonstrated that it comprises genes involved in amino acid metabolism, nitrogen assimilation as well as genes involved in sugar uptake and incorporation, indicating a role for CodY in L. monocytogenes in both carbon and nitrogen assimilation. A DeltarelA mutation reduced expression of the CodY regulon in early stationary phase and introduction of a DeltacodY mutation into a DeltarelA strain restored virulence. These data indicate that the avirulence of the DeltarelA mutant can in part be explained by the continued repression of the CodY regulon. The phenotypes of DeltarelA and DeltacodY mutants were studied in J774.A1 and Caco-2 cells and the DeltarelA mutation shown to effect intracellular growth. These results provide the first direct evidence that the activity of a CodY-type protein influences pathogenesis and provides new information on the physiological adaptation of L. monocytogenes to post-exponential phase growth and virulence. PMID:17302820

  5. Avoiding unfavourable outcomes in liposuction

    Directory of Open Access Journals (Sweden)

    Atul Khanna

    2013-01-01

    Full Text Available The origin of liposuction can be traced to an adverse event by Dujarrier in 1921 when he used a uterine curette to remove fat from the knees of a ballerina ending in an amputation secondary to damage of the femoral artery. The history of liposuction since then has been one of avoiding complications and optimising outcome. After this adverse event, liposuction was abandoned until the 1960′s when Schrudde revived the practice using small stab incisions and sharp curettage with the secondary suction to aspirate the freed tissue. This technique was associated with a high incidence of complications especially seroma and skin necrosis. Illouz then replaced the curette with a blunt cannula connected to vacuum pump thus avoiding the complications of a sharp curette. Despite the presence of various techniques for liposuction, suction assisted liposuction (SAL is still the standard technique of liposuction. This article aims to discuss literature regarding the various aspects of liposuction (SAL and to highlight the salient points in the literature and in the senior author′s experience in order to avoid unfavourable outcomes in liposuction. A literature review on avoiding complication is in liposuction including some of the seminal papers on liposuction. Liposuction is generally a safe procedure with reproducible outcome. Just like any surgical procedure it should be treated with the utmost care. Illouz published 10 commandments for liposuction in 1989 and we review these commandments to demonstrate how liposuction has evolved.

  6. Avoiding plagiarism in academic writing.

    Science.gov (United States)

    Anderson, Irene

    Plagiarism means taking the work of another and presenting it as one's own, resulting in potential upset for the original author and disrepute for the professions involved. This article aims to explore the issue of plagiarism and some mechanisms for detection and avoidance. PMID:19186631

  7. Plagiarism Avoidance in Academic Submissions

    OpenAIRE

    Cully, Philip

    2013-01-01

    The purpose of this paper is to provide undergraduate students with an introductory resource focusing on plagiarism avoidance. It sets out to identify often confusing associated nuances. From the perspective of paraphrasing, the requirements attaching to the necessary provision of proper citations are explored. The paper concludes by pondering the topic of reliability of sources.

  8. Avoidance: grammatical or semantic causes?

    NARCIS (Netherlands)

    J.H. Hulstijn; E. Marchena

    1989-01-01

    This article follows up on a study by Dagut and Laufer (1985), who found that Hebrew learners of English avoid phrasal verbs, such as ‘let down’, while preferring one-word verbs, such as ‘;disappoint’, since phrasal verbs do not exist in Hebrew. A corollary derived from Dagut and Laufer's study is t

  9. Climate induced temperature effects on growth performance, fecundity and recruitment in marine fish: developing a hypothesis for cause and effect relationships in Atlantic cod (Gadus morhua) and common eelpout (Zoarces viviparus)

    OpenAIRE

    Portner, H.O.; Berdal, B.; Blust, R.; Brix, O.; Colosimo, A.; Wachter, B; A. Giuliani; Johansen, T.; Fischer, T.; Knust, R.; Lannig, G.; Naevdal, G.; Nedenes, A.; Nyhammer, G.; Sartoris, F. J.

    2001-01-01

    Effects of global warming on animal distribution and performance become visible in many marine ecosystems. The present study was designed to develop a concept for a cause and effect understanding with respect to temperature changes and to explain ecological findings based on physiological processes. The concept is based on a wide comparison of invertebrate and fish species with a special focus on recent data obtained in two model species of fish. These fish species are both characterized by n...

  10. Investigation of the Effects of COD/TP Ratio on the Performance of a Biological Nutrient Removal System

    OpenAIRE

    Punrattanasin, Warangkana

    1997-01-01

    The laboratory-scale University of Cape Town (UCT) process was designed to investigate the effects of changing COD/TP ratios on the performance of biological nutrient removal (BNR) processes. Specific objectives of the research were to investigate the effects of COD/TP ratio on the rates of phosphorus removal, COD removal, nitrogen removal, PHB utilization and oxygen uptake. The system was fed with municipal wastewater and operated at 20° C. The influent COD concentration was held approximat...

  11. Obstacle Avoidance Through Visual Teleoperation

    Directory of Open Access Journals (Sweden)

    Muhammad Usman Keerio

    2009-01-01

    Full Text Available This paper presents a novel controlling approach forHumanoid Robot to work safely in critical situations like badlight environment using Visual Teleoperation. In this regardmodeling environments for Humanoid Teleoperation Systemis developed. Here virtual reality modeling environmentincludes development of virtual Humanoid BHR-2, andvirtual objects like table etc. The main goal of this work is toenhance our visual teleoperation system for BHR-2 in orderto avoid any collision during real time operation. SoftwareMaya is used for modeling and simulations. Maya plug-insin VC++ provides efficient modeling rule, real timeinteraction, and time saving rendering approach in a virtualenvironment. In this paper the validity of proposed scheme isshown by conducting experiments using offline step overtrajectory to avoid obstacle in bad light environment.

  12. Jam avoidance with autonomous systems

    OpenAIRE

    Tordeux, Antoine; Lassarre, Sylvain

    2015-01-01

    Many car-following models are developed for jam avoidance in highways. Two mechanisms are used to improve the stability: feedback control with autonomous models and increasing of the interaction within cooperative ones. In this paper, we compare the linear autonomous and collective optimal velocity (OV) models. We observe that the stability is significantly increased by adding predecessors in interaction with collective models. Yet autonomous and collective approaches are close when the speed...

  13. Consumer Privacy and Marketing Avoidance

    OpenAIRE

    Il-Horn Hann; Kai-Lung Hui; Sang-Yong Tom Lee; Ivan Png

    2005-01-01

    We introduce consumer avoidance into analytical marketing research. We show that consumer efforts to conceal themselves and to deflect marketing have a crucial impact on sellers¡¯ marketing strategy. Under reasonable conditions, seller marketing is a strategic complement with consumer concealment. Hence, consumer measures to conceal themselves from marketing will increase its cost-effectiveness and lead sellers to market more. Policies that encourage consumers to conceal their identities woul...

  14. Avoiding congestion in recommender systems

    International Nuclear Information System (INIS)

    Recommender systems use the historical activities and personal profiles of users to uncover their preferences and recommend objects. Most of the previous methods are based on objects’ (and/or users’) similarity rather than on their difference. Such approaches are subject to a high risk of increasingly exposing users to a narrowing band of popular objects. As a result, a few objects may be recommended to an enormous number of users, resulting in the problem of recommendation congestion, which is to be avoided, especially when the recommended objects are limited resources. In order to quantitatively measure a recommendation algorithm's ability to avoid congestion, we proposed a new metric inspired by the Gini index, which is used to measure the inequality of the individual wealth distribution in an economy. Besides this, a new recommendation method called directed weighted conduction (DWC) was developed by considering the heat conduction process on a user–object bipartite network with different thermal conductivities. Experimental results obtained for three benchmark data sets showed that the DWC algorithm can effectively avoid system congestion, and greatly improve the novelty and diversity, while retaining relatively high accuracy, in comparison with the state-of-the-art methods. (paper)

  15. Effect of reflux ratio on COD and nitrogen removals from coke plant wastewaters.

    Science.gov (United States)

    Shi, X L; Hu, X B; Wang, Z; Ding, L L; Ren, H Q

    2010-01-01

    A laboratory-scale anaerobic-anoxic-aerobic-moving bed biofilm reactor (A1-A2-O-MBBR) system was undertaken to treat coke plant wastewaters from two different factories (wastewater A and B). Wastewater B had higher BOD5/COD ratio and COD/TN ratio than wastewater A. The effects of reflux ratios on COD, TN and NH3-N removals were studied. Results indicated that, with the reflux ratio increased from 2 to 5, COD removals of wastewater A and wastewater B increased from 57.4% to 72.6% and 78.2% to 88.6%, respectively. Meanwhile, TN removals were also increased accompanying reflux ratio rise, from 53.1% to 74.4% for wastewater A and 64.2% to 83.5% for wastewater B. At the same reflux ratio, compared with wastewater A, higher COD and TN removal efficiencies were observed in wastewater B, which had higher BOD5/COD and COD/TN ratio. Reflux ratio had no significant influence on NH3-N removal; 99.0% of the overall NH3-N removal efficiency was achieved by the system for both coke plant wastewaters at any tested reflux ratio. MBBR was effective in NH3-N removal, and about 95% of the NH3-N was removed in the MBBR. PMID:20555197

  16. Sensory characteristics of different cod products related to consumer preferences and attitudes

    DEFF Research Database (Denmark)

    Sveinsdottir, K.; Martinsdottir, E.; Green-Petersen, Ditte;

    2009-01-01

    Quantitative descriptive analysis (QDA) was used to analyse the sensory quality of eight cod products, different with regard to origin (wild/farmed), Storage time (short/extended) and Storage method (fresh/frozen/packed in modified atmosphere). At the same time, 378 consumers in four European...... countries tasted and scored the cod products on a 9-point hedonic scale. In addition information on the consumers attitudes, motives/barriers and fish purchase behaviour was collected. The aim was to investigate how sensory quality corresponded to consumers liking of different cod products and to study the...

  17. Thawed cod fillets spoil less rapidly than unfrozen fillets when stored under modified atmosphere at 2 C

    DEFF Research Database (Denmark)

    Guldager, H.S.; Bøknæs, Niels; Østerberg, Carsten;

    1998-01-01

    The effect of two months of frozen storage at -20 degrees C on the spoilage characteristics and shelf life of thawed and modified atmosphere packed (MAP) cod fillets stored at 2 degrees C was studied. Thawed MAP cod fillets were compared with fresh cod fillets stored in CO2-containing modified...... atmospheres with and without added oxygen. The shelf life of 11 to 12 days in the fresh MAP cod was extended to more than 20 days in the thawed MAP cod at 2 degrees C. This shelf life extension was most likely due to the inactivation of the spoilage bacterium Photobacterium phosphoreum during frozen storage...

  18. Avoiding unfavourable outcomes in liposuction

    OpenAIRE

    Atul Khanna; George Filobbos

    2013-01-01

    The origin of liposuction can be traced to an adverse event by Dujarrier in 1921 when he used a uterine curette to remove fat from the knees of a ballerina ending in an amputation secondary to damage of the femoral artery. The history of liposuction since then has been one of avoiding complications and optimising outcome. After this adverse event, liposuction was abandoned until the 1960′s when Schrudde revived the practice using small stab incisions and sharp curettage with the secondary suc...

  19. Jam avoidance with autonomous systems

    CERN Document Server

    Tordeux, Antoine

    2016-01-01

    Many car-following models are developed for jam avoidance in highways. Two mechanisms are used to improve the stability: feedback control with autonomous models and increasing of the interaction within cooperative ones. In this paper, we compare the linear autonomous and collective optimal velocity (OV) models. We observe that the stability is significantly increased by adding predecessors in interaction with collective models. Yet autonomous and collective approaches are close when the speed difference term is taking into account. Within the linear OV models tested, the autonomous models including speed difference are sufficient to maximise the stability.

  20. Obstacle-avoiding navigation system

    Science.gov (United States)

    Borenstein, Johann; Koren, Yoram; Levine, Simon P.

    1991-01-01

    A system for guiding an autonomous or semi-autonomous vehicle through a field of operation having obstacles thereon to be avoided employs a memory for containing data which defines an array of grid cells which correspond to respective subfields in the field of operation of the vehicle. Each grid cell in the memory contains a value which is indicative of the likelihood, or probability, that an obstacle is present in the respectively associated subfield. The values in the grid cells are incremented individually in response to each scan of the subfields, and precomputation and use of a look-up table avoids complex trigonometric functions. A further array of grid cells is fixed with respect to the vehicle form a conceptual active window which overlies the incremented grid cells. Thus, when the cells in the active window overly grid cell having values which are indicative of the presence of obstacles, the value therein is used as a multiplier of the precomputed vectorial values. The resulting plurality of vectorial values are summed vectorially in one embodiment of the invention to produce a virtual composite repulsive vector which is then summed vectorially with a target-directed vector for producing a resultant vector for guiding the vehicle. In an alternative embodiment, a plurality of vectors surrounding the vehicle are computed, each having a value corresponding to obstacle density. In such an embodiment, target location information is used to select between alternative directions of travel having low associated obstacle densities.

  1. Adaptive avoidance of reef noise.

    Directory of Open Access Journals (Sweden)

    Stephen D Simpson

    Full Text Available Auditory information is widely used throughout the animal kingdom in both terrestrial and aquatic environments. Some marine species are dependent on reefs for adult survival and reproduction, and are known to use reef noise to guide orientation towards suitable habitat. Many others that forage in food-rich inshore waters would, however, benefit from avoiding the high density of predators resident on reefs, but nothing is known about whether acoustic cues are used in this context. By analysing a sample of nearly 700,000 crustaceans, caught during experimental playbacks in light traps in the Great Barrier Reef lagoon, we demonstrate an auditory capability in a broad suite of previously neglected taxa, and provide the first evidence in any marine organisms that reef noise can act as a deterrent. In contrast to the larvae of species that require reef habitat for future success, which showed an attraction to broadcasted reef noise, taxa with a pelagic or nocturnally emergent lifestyle actively avoided it. Our results suggest that a far greater range of invertebrate taxa than previously thought can respond to acoustic cues, emphasising yet further the potential negative impact of globally increasing levels of underwater anthropogenic noise.

  2. Long term operation of continuous-flow system with enhanced biological phosphorus removal granules at different COD loading.

    Science.gov (United States)

    Li, Dong; Lv, Yufeng; Zeng, Huiping; Zhang, Jie

    2016-09-01

    In this study, a continuous-flow system with enhanced biological phosphorus removal (EBPR) granules was operated at different COD concentrations (200, 300 and 400mgL(-)(1)) to investigate the effect of COD loading on this system. The results showed that when the COD concentration in influent was increased to 400mgL(-)(1), the anaerobic COD removal efficiency and total phosphorus removal efficiency reduced obviously and the settling ability of granules deteriorated due to the proliferation of filamentous bacteria. Moreover, high COD loading inhibited the EPS secretion and destroyed the stability of granules. Results of high-through pyrosequencing indicated that filamentous bacteria had a competitive advantage over polyphosphate-accumulating organisms (PAOs) at high COD loading. The performance of system, settling ability of granules and proportion of PAOs gradually recovered to the initial level after the COD concentration was reduced to 200mgL(-)(1) on day 81. PMID:27295254

  3. caco_shore - Coastal Vulnerability Index (CVI) for Cape Cod National Seashore

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — A coastal vulnerability index (CVI) was used to map the relative vulnerability of the coast to future sea-level rise within Cape Cod National Seashore in...

  4. Bedrock Data from Western Cape Cod, Massachusetts (WELLSITE shapefile, Geographic, NAD27)

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Cores collected from recent drilling in western Cape Cod, Massachusetts provide insight into the topography and petrology of the underlying bedrock. Cores from 64...

  5. Processed Continuous Resistivity Point Data from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  6. Processed Continuous Resistivity Point Data from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  7. Continuous Resistivity Profile Tracklines of Data Collected from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  8. Trimmed Processed Continuous Resistivity Point Data from Cape Cod National Seashore, Feb. 28, 2006

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  9. Trimmed Processed Continuous Resistivity Point Data from Cape Cod National Seashore, May 17-20, 2004

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Continuous resistivity profiling (CRP) surveys were conducted at Cape Cod National Seashore in 2004 and 2006 in order to test hypotheses about groundwater flow...

  10. AFSC/RACE/GAP/Nichol: Archival tag depth and temperature data from Pacific cod

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data from 250 recaptured (624 released) depth and temperature recording archival (data storage) tags attached to Pacific cod off Kodiak Island and in the eastern...

  11. Rapid determination of chemical oxygen demand (cod) using microwave digestion followed by titrimetery

    International Nuclear Information System (INIS)

    Chemical oxygen demand (COD) is an important parameter in water-pollution control analysis. It is closely related to the organic contamination level of wastewater. The open-reflux Cr-COD titration method has long been the International standard method for COD determination /sup(1)/ however, it still requires a long time (2h) for the digestion step to be completed in this procedure. The objective of this research was to investigate the availability of a rapid procedure to determine the COD in wastewater by digesting samples in a microwave system followed by ferrous ammonium sulphate titration. The results obtained using this microwave aided digestion system were also compared with those obtained by conventional open reflux method. (author)

  12. Specific inhibition of Photobacterium phosphoreum extends the shelf life of modified-atmosphere-packed cod fillets

    DEFF Research Database (Denmark)

    Dalgaard, Paw; Munoz, L.G.; Mejlholm, Ole

    1998-01-01

    rather than the development of a new product. In naturally contaminated modified-atmosphere-packed cod fillets, 500 ppm Na(2)CaEDTA reduced the growth rate of P. phosphoreum by 40% and shelf life was increased proportionally by 40%, from 15 to 17 days to 21 to 23 days at 0 degrees C. In aerobically......Inhibition of the specific spoilage organism, Photobacterium phosphoreum, was studied in model substrates and in modified- atmosphere-packed cod fillets. The objective was to determine how inhibition of this organism influenced spoilage. The spoilage reactions limiting shelf life were studied...... stored cod fillets other microorganisms were responsible for spoilage and Na2CaEDTA had no effect on shelf Life. The extension of the shelf life of modified-atmosphere-packed cod therefore was a result of the reduced growth of P. phosphoreum and no other microbial or nonmicrobial spoilage reactions...

  13. Time for Fishing: Bargaining Power in the Baltic Swedish Cod Fishery

    OpenAIRE

    Blomquist , Johan; Hammarlund, Cecilia; Waldo, Staffan

    2013-01-01

    How are market conditions affected by a change in fishery regulations? Who benefits and who loses? The paper discusses the price effects of a reform in the Swedish Baltic cod fishery where vessels using active gear were given annual quotas rather than the previously applied quarterly quotas. We investigate whether the bargaining power of fishers using trawlers have improved after the reform using a difference-in-difference approach. Since fishers have more freedom to fish for cod over the yea...

  14. Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod

    OpenAIRE

    Berg, Paul R; Bastiaan Star; Christophe Pampoulie; Marte Sodeland; Julia M I Barth; Halvor Knutsen; Jakobsen, Kjetill S.; Sissel Jentoft

    2016-01-01

    Identification of genome-wide patterns of divergence provides insight on how genomes are influenced by selection and can reveal the potential for local adaptation in spatially structured populations. In Atlantic cod – historically a major marine resource – Northeast-Arctic- and Norwegian coastal cod are recognized by fundamental differences in migratory and non-migratory behavior, respectively. However, the genomic architecture underlying such behavioral ecotypes is unclear. Here, we have ana...

  15. Cod ranching in the Westfjords : a political, social, and spatial analysis

    OpenAIRE

    Gaines, Graham, 1982-

    2013-01-01

    This research aims to identify the legal, political, and social contexts necessary for the successful implementation of cod ranching projects in the Westfjords of Iceland. With the technical components tested and economic viability shown, cod ranching has been slow to develop mainly due to social and political obstacles. One such obstacle concerns the allocation of a large area of a fjord to an exclusive user, which could potentially displace fishing effort. Interviews with government agency ...

  16. WO3/W Nanopores Sensor for Chemical Oxygen Demand (COD) Determination under Visible Light

    OpenAIRE

    Xuejin Li; Jing Bai; Qiang Liu; Jianyong Li; Baoxue Zhou

    2014-01-01

    A sensor of a WO3 nanopores electrode combined with a thin layer reactor was proposed to develop a Chemical Oxygen Demand (COD) determination method and solve the problem that the COD values are inaccurately determined by the standard method. The visible spectrum, e.g., 420 nm, could be used as light source in the sensor we developed, which represents a breakthrough by limiting of UV light source in the photoelectrocatalysis process. The operation conditions were optimized in this work, and t...

  17. Demand characteristics for imported cod products in Portugal frozen, salted & dried and salted

    OpenAIRE

    Asche, Frank; Gordon, Daniel V.

    2015-01-01

    The demand function represents the fundamental building block in economics and provides important information for investment and policy purposes. The aim of this paper is to characterize and measure the demand structure for imported cod products to Portugal. A PCAIDS model is used to identify own- and cross-price elasticities of demand for frozen, salted & dried and salted cod products. The estimated elasticities of demand are then used in combination with a demand growth index to measure shi...

  18. Impact of influent COD/N ratio on disintegration of aerobic granular sludge.

    Science.gov (United States)

    Luo, Jinghai; Hao, Tianwei; Wei, Li; Mackey, Hamish R; Lin, Ziqiao; Chen, Guang-Hao

    2014-10-01

    Disintegration of aerobic granular sludge (AGS) is a challenging issue in the long-term operation of an AGS system. Chemical oxygen demand (COD)-to-nitrogen (N) ratio (COD/N), often variable in industrial wastewaters, could be a destabilizing factor causing granule disintegration. This study investigates the impact of this ratio on AGS disintegration and identifies the key causes, through close monitoring of AGS changes in its physical and chemical characteristics, microbial community and treatment performance. For specific comparison, two lab-scale air-lift type sequencing batch reactors, one for aerobic granular and the other for flocculent sludge, were operated in parallel with three COD/N ratios (4, 2, 1) applied in the influent of each reactor. The decreased COD/N ratios of 2 and 1 strongly influenced the stability of AGS with regard to physical properties and nitrification efficiency, leading to AGS disintegration when the ratio was decreased to 1. Comparatively the flocculent sludge maintained relatively stable structure and nitrification efficiency under all tested COD/N ratios. The lowest COD/N ratio resulted in a large microbial community shift and extracellular polymeric substances (EPS) reduction in both flocculent and granular sludges. The disintegration of AGS was associated with two possible causes: 1) reduction in net tyrosine production in the EPS and 2) a major microbial community shift including reduction in filamentous bacteria leading to the collapse of granule structure. PMID:24950459

  19. Refined localization of an X-linked cone-rod dystrophy (COD1)

    Energy Technology Data Exchange (ETDEWEB)

    Dash-Moi, A. [Univ. of Pitsburgh School of Medicine, Pittsburgh, PA (United States); Ferrell, R.E.; Gorin, M.B. [Univ. of Pittsburgh Graduate School of Public Health, Pittsburgh, PA (United States)

    1994-09-01

    Several of us previously reported linkage of a COD1 family to DXS7 and MAOA, assigned to Xp11.3. Two recombination events between COD1 and DXS84 were observed, suggesting that COD1 is not associated with the RP3 locus. The diversity of clinical findings within the family, which include variable rod and cone involvement, suggests that COD1 may be allelic to the RP2 locus. We have conducted additional linkage of this family with markers DXS993 and DXS1003 and have added a smaller family with similar clinical findings and X-linked inheritance. Pairwise linkage analysis gave combined maximum lod scores and {theta}`s for COD1 of 4.41 at {theta}=0 with DXS993 and 2.75 at {theta}=0.05 with DXS1003. One obligate recombinant was observed with DXS1003. The two families were insufficient to test for genetic heterogeneity. The probable order and spacing of markers as determined with the CEPH families is pter-DXS84-(6.6 cM)-DXS993-(0.6 cM)-MAOA-(0.4 cM)-DXS7-(4.4 cM)-DSX1003-ARAF1-TIMP1-cent. These results support the co-localization of COD1 to a 12 cM interval between DXS84 and DXS1003 that includes the CSNB1 and RP2 loci.

  20. Effect of wastewater COD/N ratio on aerobic nitrifying sludge granulation and microbial population shift

    Institute of Scientific and Technical Information of China (English)

    Lei Wu; Chengyao Peng; Yongzhen Peng; Lingyun Li; Shuying Wang; Yong Ma

    2012-01-01

    The effect of COD/N ratio on the granulation process and microbial population succession was investigated.Four identical sequencing batch reactors,R1,R2,R3 and R4,were operated with various initial COD/N ratios ranging from 0/200 to 800/200 (m/n).Ethanol was fed as the source of COD.Aerobic granules were successfully cultivated in R2 and R3,operating with the COD/N ratio of 200/200 and 400/200,respectively.Scanning electron microscope observations indicated that short rod-shaped and spherical bacteria were dominant in R2,while granules produced in R3 were surrounded with a large amount of filamentous bacteria.The average specific nitritation rate in R2 and R3 were 0.019 and 0.008 mg N/(mg MLVSS.hr),respectively.Fluorescence in situ hybridization results demonstrated that nitrifying bacteria population was enriched remarkably in R2.It indicated that nitrification ability and nitrifying bacteria population were enriched remarkably at low COD/N ratio.However,no granules were formed in R1and R4 which might attribute to either limited or excessive extracellular polymeric substances production.This study contributed to a better understanding of the role of COD/N ratio in nitrifying sludge granulation.

  1. Modelling the distribution of fish accounting for spatial correlation and overdispersion

    DEFF Research Database (Denmark)

    Lewy, Peter; Kristensen, Kasper

    2009-01-01

    The spatial distribution of cod (Gadus morhua) in the North Sea and the Skagerrak was analysed over a 24-year period using the Log Gaussian Cox Process (LGCP). In contrast to other spatial models of the distribution of fish, LGCP avoids problems with zero observations and includes the spatial cor...... was found to be constant or declining in the period. This means that cod does not follow the theory of density-dependent habitat selection, as the concentration of the stock does not increase when stock abundance decreases....

  2. Effects of COD to Phosphorus Ratios on the Metabolism of PAOs in Enhanced Biological Phosphorus Removal with Different Carbon Sources

    Institute of Scientific and Technical Information of China (English)

    Tao Jiang; Junguo He; Xiaonan Yang; Jianzheng Li

    2015-01-01

    To elucidate the phosphorus removal and metabolism under various COD/P ratio, a sludge highly enriched in PAOs was used to investigate the impacts of COD/P in batch tests under different carbon supply conditions. Acetate, propionate and a mixture of acetate and propionate at a ratio of 3 ∶ 1 ( COD basis) was used as carbon sources with the COD/P of 20, 15,10 and 5�0 gCOD/gP, respectively. The minimum COD/P ratios for complete P removal were found to be 8�24 gCOD/gP for acetate, 11�40 gCOD/gP for propionate and 9�10 gCOD/gP for the 3 ∶ 1 mixture of acetate and propionate. Converted to a mass basis, all three cases had a very similar ratio of 7�7 gVFA/gP, which represented a useful guide for operation of EBPR plants to identify possible shortages inVFAs. The trend in PHV accumulation during the anaerobic period along with the decrease of COD/P ratios suggested that, PAOs may use the TCA pathway for anaerobic VFA uptake to maintain the required NADH production with reduced glycogen degradation. During the aerobic phase, the glycogen pool was reduced but remained enough compared to the requirement for anaerobic VFA uptake, and the synthesis and degradation of glycogen was not the inhibition factor of PAOs.

  3. Estimation of the maximum allowable loading amount of COD in Luoyuan Bay by a 3-D COD transport and transformation model

    Science.gov (United States)

    Wu, Jialin; Li, Keqiang; Shi, Xiaoyong; Liang, Shengkang; Han, Xiurong; Ma, Qimin; Wang, Xiulin

    2014-08-01

    The rapid economic and social developments in the Luoyuan and Lianjiang counties of Fujian Province, China, raise certain environment and ecosystem issues. The unusual phytoplankton bloom and eutrophication, for example, have increased in severity in Luoyuan Bay (LB). The constant increase of nutrient loads has largely caused the environmental degradation in LB. Several countermeasures have been implemented to solve these environmental problems. The most effective of these strategies is the reduction of pollutant loadings into the sea in accordance with total pollutant load control (TPLC) plans. A combined three-dimensional hydrodynamic transport-transformation model was constructed to estimate the marine environmental capacity of chemical oxygen demand (COD). The allowed maximum loadings for each discharge unit in LB were calculated with applicable simulation results. The simulation results indicated that the environmental capacity of COD is approximately 11×104 t year-1 when the water quality complies with the marine functional zoning standards for LB. A pollutant reduction scheme to diminish the present levels of mariculture- and domestic-based COD loadings is based on the estimated marine COD environmental capacity. The obtained values imply that the LB waters could comply with the targeted water quality criteria. To meet the revised marine functional zoning standards, discharge loadings from discharge units 1 and 11 should be reduced to 996 and 3236 t year-1, respectively.

  4. Performance of a haloalkaliphilic bioreactor and bacterial community shifts under different COD/SO{sub 4}{sup 2−} ratios and hydraulic retention times

    Energy Technology Data Exchange (ETDEWEB)

    Zhou, Jie-Min [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); University of Chinese Academy of Sciences, Beijing 100049 (China); Song, Zi-Yu [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); Yan, Dao-Jiang; Liu, Yi-Lan [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); University of Chinese Academy of Sciences, Beijing 100049 (China); Yang, Mao-Hua [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); Cao, Hong-Bin [National Engineering Laboratory for Hydrometallurgical Cleaner Production Technology, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China); Xing, Jian-Min, E-mail: jmxing@home.ipe.ac.cn [National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, PO Box 353, Beijing 100190 (China)

    2014-06-01

    Highlights: • Haloalkaliphilic microorganisms were used to reduce sulfate. • Sulfide concentration reached up to 1603 mg/L. • There was no sulfide inhibition to haloalkaliphilic microorganisms. • Bacterial community of haloalkaliphilic bioreactor was studied. - Abstract: Sulfur dioxide from flue gas was converted into sulfate after the absorption of alkaline solutions. Haloalkaliphilic microorganisms have been used in reducing sulfate to decrease expenses and avoid sulfide inhibition. The effects of different COD/SO{sub 4}{sup 2−} ratios and hydraulic retention times (HRTs) on the sulfate removal efficiency and bacterial community were investigated in model experiments. Ethanol showed better performance as an electron donor than lactate. The optimum COD/SO{sub 4}{sup 2−} ratio and HRT were 4.0 and 18 h, respectively, with respective sulfate removal efficiency and rate of 97.8 ± 1.11% and 6.26 ± 0.0710 g/L d. Sulfide concentrations reached 1603 ± 3.38 mg/L. Based on denaturing gradient gel electrophoresis analysis of 16S rDNA, the major sulfate-reducing bacterium (SRB) was Desulfonatronovibrio sp., which was only detected at a COD/SO{sub 4}{sup 2−} ratio of 4.0 using ethanol as an electron donor. Different HRTs had no significant effect on the band corresponding to this species. PCR results show that methane-producing archaea (MPA) were from the acetoclastic methanogenic family Methanosarcinaceae. Quantitative real-time PCR did not demonstrate any significant competition between SRB and MPA. The findings of this study indicate that sulfate reduction, nitrate reduction, and sulfide oxidization may occur in the same bioreactor.

  5. Performance of a haloalkaliphilic bioreactor and bacterial community shifts under different COD/SO42− ratios and hydraulic retention times

    International Nuclear Information System (INIS)

    Highlights: • Haloalkaliphilic microorganisms were used to reduce sulfate. • Sulfide concentration reached up to 1603 mg/L. • There was no sulfide inhibition to haloalkaliphilic microorganisms. • Bacterial community of haloalkaliphilic bioreactor was studied. - Abstract: Sulfur dioxide from flue gas was converted into sulfate after the absorption of alkaline solutions. Haloalkaliphilic microorganisms have been used in reducing sulfate to decrease expenses and avoid sulfide inhibition. The effects of different COD/SO42− ratios and hydraulic retention times (HRTs) on the sulfate removal efficiency and bacterial community were investigated in model experiments. Ethanol showed better performance as an electron donor than lactate. The optimum COD/SO42− ratio and HRT were 4.0 and 18 h, respectively, with respective sulfate removal efficiency and rate of 97.8 ± 1.11% and 6.26 ± 0.0710 g/L d. Sulfide concentrations reached 1603 ± 3.38 mg/L. Based on denaturing gradient gel electrophoresis analysis of 16S rDNA, the major sulfate-reducing bacterium (SRB) was Desulfonatronovibrio sp., which was only detected at a COD/SO42− ratio of 4.0 using ethanol as an electron donor. Different HRTs had no significant effect on the band corresponding to this species. PCR results show that methane-producing archaea (MPA) were from the acetoclastic methanogenic family Methanosarcinaceae. Quantitative real-time PCR did not demonstrate any significant competition between SRB and MPA. The findings of this study indicate that sulfate reduction, nitrate reduction, and sulfide oxidization may occur in the same bioreactor

  6. Cod liver oil/honey mixture: An effective treatment of equine complicated lower leg wounds

    Directory of Open Access Journals (Sweden)

    Magda mahmoud Ali and Khaled Radad

    Full Text Available Wounds are of great concern in animals as they affect animal productivity and their treatment represents an economic burden to the owners particularly in developing countries. The present study investigated the beneficial role of a mixture of cod liver oil and honey in treatment of old wounds in equines. In which, 3 horses and 7 donkeys were admitted to the Veterinary Teaching Hospital at Assiut University, Assiut, Egypt with old wounds at the metacarpus (5 cases and metatarsus (3 cases and at the level of fetlock and carpal joints (one case each. Treatment of these wounds with cod liver oil/honey mixture markedly decreased their sizes and resulted in formation of a healthy scar after one month of treatment. To explain the mechanisms that underlie the effects of this mixture, 9 surgically-induced wounds at the metacarpus in 9 donkeys were treated with honey, cod liver oil or the mixture (3 wounds each and compared with parallel untreated control wounds at the metatarsus. It was found that treatment of wounds with honey, cod liver oil and the mixture apparently decreased the size of wounds. Histopathological examination revealed that treated wounds with honey or cod liver oil showed complete epithelization over the wound areas. On the other hand, epithelization process was not complete in wounds treated with the mixture. Granulation tissue showed some variability between different treatments. Of which, wounds treated with the mixture showed a higher degree of maturity with increasing numbers of fibrocytes and parallel collagenous fibers. This could underlie the good results obtained in case studied wounds with the mixture. In conclusion, mixture of cod liver oil and honey is beneficial in treatment of old traumatized wounds in equine and this effect is primarily mediated by formation of healthy and mature scars. Cod liver oil or honey alone is beneficial for healing of recent and surgical wounds as they facilitate epithelization process. [Vet

  7. Effect of catch size and shape on the selectivity of diamond mesh cod-ends: I. Model development

    DEFF Research Database (Denmark)

    Herrmann, Bent

    2005-01-01

    An individual-based model that simulates fish selection processes in diamond mesh cod-ends of towed fishing gears is outlined. The model is implemented in a computer program called PRESEMO. A typical simulation can be carried out within a few minutes on a personal computer. Up to four different...... populations of fish entering the cod-end during a tow can be accounted for. Each fish is assigned a weight, girth, width and height according to its length, and is assumed to have an elliptical cross-section. Fish are allocated a period of travel time down the cod-end, a period for swimming in the cod...... from information on the shape of the cod-end, which depends on the catch weight. The cod-end shape is updated dynamically as the catch builds up during the tow. During a simulation the selection process is continually visualized, that is, the entry, movement and escape attempts of individual fish are...

  8. EFFEKTIFITAS SARINGAN BIOFILTER ANAEROB DAN AEROB DALAM MENURUNKAN KADAR BOD5, COD DAN NITROGEN TOTAL LIMBAH CAIR INDUSTRI KARET

    OpenAIRE

    Hasanuddin, ishak; Hatijah; Seweng, Arifin

    2008-01-01

    This study was aimed to 1) compare effectiveness of aerobic and anaerob biofilters in reducing BOD5, COD, and Total Nitrogen levels, 2) examine the interaction between immersion times and biofilter medium in reducing BOD5, COD and Total Nitrogen levels. This study was an experimental study using biofilters of brick fraction and data analysis was permormed using ANOVE tes. Study result indicated that anaerobic and aerobic biofilters medium were effective in reducing BOD5, COD and Totall Nitrog...

  9. Systems Level Analyses Reveal Multiple Regulatory Activities of CodY Controlling Metabolism, Motility and Virulence in Listeria monocytogenes

    OpenAIRE

    Lior Lobel; Herskovits, Anat A.

    2016-01-01

    Bacteria sense and respond to many environmental cues, rewiring their regulatory network to facilitate adaptation to new conditions/niches. Global transcription factors that co-regulate multiple pathways simultaneously are essential to this regulatory rewiring. CodY is one such global regulator, controlling expression of both metabolic and virulence genes in Gram-positive bacteria. Branch chained amino acids (BCAAs) serve as a ligand for CodY and modulate its activity. Classically, CodY was c...

  10. The effect of pH and operation mode for COD removal of slaughterhouse wastewater with Anaerobic Batch Reactor (ABR

    Directory of Open Access Journals (Sweden)

    Maria Octoviane Dyan

    2015-01-01

    Full Text Available Disposal of industrial wastes in large quantities was not in accordance with today's standards of waste into environmental issues that must be overcome with proper treatment. Similarly, the abattoir wastewater that contains too high organic compounds and suspended solids. The amount of liquid waste disposal Slaughterhouse (SW with high volume also causes pollution. The research aim to resolve this problem by lowering the levels of BOD-COD to comply with effluent quality standard. Anaerobic process is the right process for slaughterhouse wastewater treatment because of high content of organic compounds that can be utilized by anaerobic bacteria as a growth medium. Some research has been conducted among abattoir wastewater treatment using anaerobic reactors such as ABR, UASB and ASBR. Our research focuses on the search for the optimum results decline effluent COD levels to match the quality standards limbah and cow rumen fluid with biodigester ABR (Anaerobic Batch Reactor. The variables used were PH of 6, 7, and 8, as well as the concentration ratio of COD: N is 400:7; 450:7, and 500:7. COD value is set by the addition of N derived from urea [CO(NH2 2]. COD levels will be measured daily by water displacement technique. The research’s result for 20 days seen that optimum PH for biogas production was PH 7,719 ml. The optimum PH for COD removal is PH 6, 72.39 %. The operation mode COD:N for biogas production and COD removal is 500:7, with the production value is 601 ml and COD removal value is 63.85 %. The research’s conclusion, the PH optimum for biogas production was PH 7, then the optimum PH for COD removal is PH 6. The optimum operation mode COD:N for biogas production and COD removal was 500:7

  11. PENURUNAN BOD DAN COD LIMBAH CAIR INDUSTRI TEKSTIL DI KABUPATEN PEKALONGAN DENGAN METODE MULTI SOIL LAYERING

    Directory of Open Access Journals (Sweden)

    Irmanto

    2008-11-01

    Full Text Available Multi Soil Layering (MSL system is a method of wastewater treatment that increase the soils function to purify wastewater. In the construction of MSL, soils mixed with the charcoal and then filled into the box of size 50x14x50 cm in layers structured like brick pattern. The aims of this research are to determine the concentration of BOD and COD on textile industrial wastewater before and after the process by MSL method. It also determines the optimal loading rate of wastewater on the MSL system, and then it can determine the efficiency of MSL system on reducing the concentration of BOD and COD on textile industrial wastewater. The method which used in this research is an experimental method. The wastewater on the MSL system is loaded on the loading rate variety: 160, 320, 480, 640, and 800 L m-2 day-1. The efficiency of MSL system to removing BOD and COD on textile industrial wastewater are determined on optimal loading rate. The research gave result that MSL method could remove BOD and COD on textile industrial wastewater on the optimal loading rate 320 L m-2 day-1. The efficiency of MSL system in removing BOD and COD on textile industrial wastewater are 96.52 and 80.87% respectively. This indicated that the method MSL serve the purpose of effective alternative method in processing of liquid waste textile industry.

  12. COD and BOD reduction from coffee processing wastewater using Avacado peel carbon.

    Science.gov (United States)

    Devi, Rani; Singh, Vijender; Kumar, Ashok

    2008-04-01

    The aim of this study was the assessment of reduction of chemical oxygen demand (COD) and biological oxygen demand (BOD) of wastewater from coffee processing plant using activated carbon made up of Avacado Peels. The complete study was done in batch mode to investigate the effect of operating parameters. The results of the COD and BOD concentration reduction with avocado peel carbon (APC) and commercial activated carbon (CAC) were compared and optimum operating conditions were determined for maximum reduction. Adsorption isotherm was also studied besides the calculation of optimum treatment parameters for maximum reduction of COD and BOD concentration from effluent of the coffee processing plant. The maximum percentage reduction of COD and BOD concentration under optimum operating conditions using APC was 98.20% and 99.18% respectively and with CAC this reduction was 99.02% and 99.35% respectively. As the adsorption capacity of APC is comparable with that of CAC for reduction of COD and BOD concentration, it could be a lucrative technique for treatment of domestic wastewater generated in decentralized sectors. PMID:17493806

  13. Penentuan Kadar COD ( Chemical Oxygen Demand ) Pada Limbah Cair Rumah Sakit Sultan Sulaiman Dengan Menggunakan Spectroquant Nova 60

    OpenAIRE

    Windari, Rafika Tri

    2013-01-01

    The determination of COD level ( chemical oxygen demand ) waste water from Sultan Sulaiman’s hospital with Spectroquant Nova 60. Has been made carried out by heating for two hour at 148oC do into reactor’s COD result that COD level of waste water at the first week have average 40,150 mg/L, the second is 45,249 mg/L and the third 53,558 mg/L. COD level resulted below maximum level. From the result showed that waste water not effluent from standart quality required of KEP-58/MenLH/12/1995 ...

  14. APPLICATION OF ELECTROCHEMICAL METHODS FOR DECREASING OF CHEMICAL OXYGEN DEMAND (COD) AND TOTAL SUSPENDED SOLID (TSS) OF TOFU INDUSTRIAL WASTEWATER

    OpenAIRE

    Suyata; Irmanto; Undri Rastuti

    2015-01-01

    Tofu industrial wastewater has high COD and TSS level, which it cause an environmental pollution. Therefore, it is necessary to decrease the value of COD and TSS of tofu industrial wastewater before discharge into the water body. Decreasing of COD and TSS values can be carried out using an electrochemical method. The purpose of this research was to determine the effect of potential, electrode distance, pH, and time to decrease of COD and TSS value of the tofu industrial wastewater. The experi...

  15. Correlation of COD and BOD of domestic wastewater with the power output of bioreactor

    International Nuclear Information System (INIS)

    This research article deals with the studies on the development of the correlation of COD, BOD, and BOD/sub 5/ of domestic wastewater (DWW), and fermented domestic wastewater (FDWW) with the power output of the microbial fuel cell (MFC). The fermentation of DWW was carried out with yeast (Saccharomyces cerevisiae), and yogurt bacteria (Streptococcus lactis) to produce biohydrogen which was converted to the electrical energy through the development of microbial fuel cell (MFC). The values of COD, BOD, and BOD/sub 5/ for yogurt fermented domestic wastewater (Yogurt-FDWW) were found to be greater than the values of yeast fermented domestic wastewater (Yeast-FDWW). The power output of DWW and FDWW was increased with the increase in COD, BOD and BOD/sub 5/ values. The main objective of this article is to develop the renewable alternative of fossil fuels which are the major cause of global warming and global pollution. (author)

  16. Trophodynamic control on recruitment success in Baltic cod : the influence of cannibalism

    DEFF Research Database (Denmark)

    Neuenfeldt, Stefan; Köster, Fritz

    2000-01-01

    Cod is the top piscivore predator in the Baltic Sea ecosystem. Based on stomach content data from 62427 cod collected during 1977-1994 and food consumption rates, cannibalism in the Eastern and Western Baltic cod stocks has been quantified using multispecies virtual population analysis. In the...... Eastern Baltic stock, depending on model assumptions, an average of 25-38% of the 0-group and 11-17% of the 1-group were removed by predation by adults. Thus, between age 0 and age 2 a year class may lose on average about 31% and 44% of the initial number as a result of cannibalism. Cannibalism is lower......, stock, recruitment, and cannibalism declined steadily until the early 1990s and then increased again. Problems identified in relation to data compilation and estimation procedure are discussed with respect to their impact on estimates of cannibalism and stock- recruitment relationships. (C) 2000...

  17. Removal of COD from olive mill wastewater by Fenton's reagent: Kinetic study

    International Nuclear Information System (INIS)

    This work describes the application of Fenton's reagent (H2O2/Fe2+) to the removal of chemical oxygen demand (COD) from olive mill wastewater (OMW) in a laboratory-scale batch reactor. The effect of different operational conditions, namely, hydrogen peroxide and ferrous ion concentrations, temperature and initial pH were evaluated. ORP, pH and dissolved oxygen were on-line monitored. Working with an initial pH equal to 3.5, a temperature of 30 deg. C, a molar ratio H2O2/Fe2+ = 15 and a weight ratio R = H2O2/COD = 1.75 makes possible a COD conversion of 70%. A kinetic study was carried out using a modified pseudo-first-order model. The experiments performed at different temperatures allowed the calculation of the Arrhenius equation parameters and the global activation energy for the pseudo-first-order reaction (28.2 kJ/mol).

  18. Cape Cod Aquifer Management Project (CCAMP): demonstration of a geographic information system for ground water protection

    Energy Technology Data Exchange (ETDEWEB)

    Steppacher, L.

    1988-09-01

    This publication summarizes the application of GIS Technology to the project. Geographic Information systems (GIS) technology has the capability of overlaying various mapped data layers, determining distances from fixed points, automatic changing of map scales, and preparing maps from tabular point data to better understand the complex issues involved in decision making. GIS was used for a series of pilot analyses for Cape Cod. The work concentrated on the development of a digital data base and assessment at three different geographic levels of analysis: (1) the zone of contribution to nine public water-supply wells in a highly urbanized area; (2) a rural, seasonally populated, summer tourist town; and (3) the Cape Cod peninsula. The project was designed to raise issues and answer the types of ground water management questions being asked on Cape Cod, but also those faced by ground water managers in other areas of the country as well.

  19. Study on Migration and Transformation Rule of Organic Pollutants (COD) in Aerated Zone

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    Collecting waste water with a certain concentration of organic pollutants COD (chemical oxygen demand), static adsorption, static biodegradation and dynamic soil column experiments were made in laboratory, we researched migration and transformation of COD in aerated zone, and put forward a mathematical model showing the process. The results show that adsorption of organism in aerated zone is linear, which is represented by Henry's law s=Kdc+sd, adsorption coefficient Kd =0. 069 3;biodegradation diagram accord basically with first-order kinetics equation c=c0e-K1t , biodegradation coefficient K1 = 0. 049 9 d-1; dispersion coefficient D= 0. 002 42 m2/d in experiments. The migration and transformation of organic pollutants (COD) in aerated zone jointly result from many factors such as dispersion, adsorption and biodegradation etc..

  20. Removal of COD and turbidity to improve wastewater quality using electrocoagulation technique

    International Nuclear Information System (INIS)

    Electrocoagulation (EC) is becoming a popular process to be used for wastewater treatment. The removal of COD and turbidity from wastewater by EC using iron (Fe) electrode material was investigated in this paper. Several working parameters, such as pH, current density, and operating time were studied in an attempt to achieve a higher removal capacity. Wastewater sample was made from milk powder with initial COD of 1140 mgL-1 and turbidity of 491 NTU. Current density was varied from 3.51 to 5.62 mA cm-2, and operating time of between 30 and 50 minutes. The results show that the effluent wastewater was very clear and its quality exceeded the direct discharge standard. The removal efficiencies of COD and turbidity were high, being more than 65 % and 95 %. In addition, the experimental results also show that the electrocoagulation can neutralize pH of wastewater. (author)

  1. The crack opening displacement (COD) design curve approach to crack tolerance

    International Nuclear Information System (INIS)

    A paper at an I.Mech.E. Conference in 1971 described The Welding Institute's COD design curve approach to the specification of tolerable crack sizes in pressure vessels. This paper reviews further developments in the design curve analysis and in addition examines the definition and fracture characterising role of COD in yielding fracture mechanics. Results are presented from a recent study aimed at assessing the degree of conservatism in the design curve through a statistical analysis of results from more than seventy COD bend and wide plate tensile tests. It is shown that the maximum allowable crack size includes a safety margin of approximately 2.5 on average, for both through and part-through cracks. The significance of residual stresses in the design curve prediction is also considered. (author)

  2. Association between nematode Hysterothylacium aduncum invasion of cod larvae and growth

    DEFF Research Database (Denmark)

    Mehrdana, Foojan; Bahlool, Qusay Z. M.; Kuhn, Jesper; Skovgaard, Alf; Munk, Peter; Buchmann, Kurt

    affect the cod stock in the North Sea. The objective of the present study was to elucidate if infections are associated with a decrease or an increase of fish size when examining fish of the same age. We investigated effects of H. aduncum infections on the growth rate of cod larvae by using the otolith......, lapillus otoliths were removed, polished and the number of growth zones in each otolith counted by light microscopy. Each growth zone indicates one day of the fish life span. Covariance analysis demonstrated highly significant differences (p≤ 0.001) between the growth rate of infected and uninfected cod......Parasitic nematodes of the superfamily Ascaridoidea are distributed worldwide also with numerous representatives in fish. They have an important role to play in the aquatic environment and may affect survivability of fish. The life cycle of many of these fish infecting roundworm species includes...

  3. COD Removal Efficiencies of Some Aromatic Compounds in Supercritical Water Oxidation

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Some aromatic compounds, phenol, aniline and nitrobenzene, were oxidized in supercritical water. It was experimentally found that the chemical oxygen demand (COD) removal efficiency of these organic compounds can achieve a high level more than 90% in a short residence time at temperatures high enough. As temperature, pressure and residence time increase, the COD removal efficiencies of the organic compounds would all increase. It is also found that temperature and residence time offer greater influences on the oxidation process than pressure. The difficulty in oxidizing these three compounds is in the order of nitrobenzene > aniline > Phenol. In addition, it is extremely difficult to oxidize aniline and nitrobenzene to CO2 and H2O at the temperature lower than 873.15 K and 923.15 K, respectively. Only at the temperature higher than 873.15 K and 923.15 K, respectively, the COD removal efficiencies of 90% of aniline and nitrobenzene can be achieved.

  4. Obesity and Healthcare Avoidance: A Systematic Review

    OpenAIRE

    Robert D McGuigan; Jenny M Wilkinson

    2015-01-01

    This review addresses the issue of health care avoidance and obesity. English language journal articles published between 1990 and 2012 that addressed the review question|“is being overweight or obese an unrecognized factor in healthcare avoidance?” were located using major databases. A modified JADAD scoring system was then used to assess papers. Ten papers were identified which directly addressed the review question. A positive relationship exists between obesity and healthcare avoidance. T...

  5. Systems Level Analyses Reveal Multiple Regulatory Activities of CodY Controlling Metabolism, Motility and Virulence in Listeria monocytogenes.

    Science.gov (United States)

    Lobel, Lior; Herskovits, Anat A

    2016-02-01

    Bacteria sense and respond to many environmental cues, rewiring their regulatory network to facilitate adaptation to new conditions/niches. Global transcription factors that co-regulate multiple pathways simultaneously are essential to this regulatory rewiring. CodY is one such global regulator, controlling expression of both metabolic and virulence genes in Gram-positive bacteria. Branch chained amino acids (BCAAs) serve as a ligand for CodY and modulate its activity. Classically, CodY was considered to function primarily as a repressor under rich growth conditions. However, our previous studies of the bacterial pathogen Listeria monocytogenes revealed that CodY is active also when the bacteria are starved for BCAAs. Under these conditions, CodY loses the ability to repress genes (e.g., metabolic genes) and functions as a direct activator of the master virulence regulator gene, prfA. This observation raised the possibility that CodY possesses multiple functions that allow it to coordinate gene expression across a wide spectrum of metabolic growth conditions, and thus better adapt bacteria to the mammalian niche. To gain a deeper understanding of CodY's regulatory repertoire and identify direct target genes, we performed a genome wide analysis of the CodY regulon and DNA binding under both rich and minimal growth conditions, using RNA-Seq and ChIP-Seq techniques. We demonstrate here that CodY is indeed active (i.e., binds DNA) under both conditions, serving as a repressor and activator of different genes. Further, we identified new genes and pathways that are directly regulated by CodY (e.g., sigB, arg, his, actA, glpF, gadG, gdhA, poxB, glnR and fla genes), integrating metabolism, stress responses, motility and virulence in L. monocytogenes. This study establishes CodY as a multifaceted factor regulating L. monocytogenes physiology in a highly versatile manner. PMID:26895237

  6. Systems Level Analyses Reveal Multiple Regulatory Activities of CodY Controlling Metabolism, Motility and Virulence in Listeria monocytogenes.

    Directory of Open Access Journals (Sweden)

    Lior Lobel

    2016-02-01

    Full Text Available Bacteria sense and respond to many environmental cues, rewiring their regulatory network to facilitate adaptation to new conditions/niches. Global transcription factors that co-regulate multiple pathways simultaneously are essential to this regulatory rewiring. CodY is one such global regulator, controlling expression of both metabolic and virulence genes in Gram-positive bacteria. Branch chained amino acids (BCAAs serve as a ligand for CodY and modulate its activity. Classically, CodY was considered to function primarily as a repressor under rich growth conditions. However, our previous studies of the bacterial pathogen Listeria monocytogenes revealed that CodY is active also when the bacteria are starved for BCAAs. Under these conditions, CodY loses the ability to repress genes (e.g., metabolic genes and functions as a direct activator of the master virulence regulator gene, prfA. This observation raised the possibility that CodY possesses multiple functions that allow it to coordinate gene expression across a wide spectrum of metabolic growth conditions, and thus better adapt bacteria to the mammalian niche. To gain a deeper understanding of CodY's regulatory repertoire and identify direct target genes, we performed a genome wide analysis of the CodY regulon and DNA binding under both rich and minimal growth conditions, using RNA-Seq and ChIP-Seq techniques. We demonstrate here that CodY is indeed active (i.e., binds DNA under both conditions, serving as a repressor and activator of different genes. Further, we identified new genes and pathways that are directly regulated by CodY (e.g., sigB, arg, his, actA, glpF, gadG, gdhA, poxB, glnR and fla genes, integrating metabolism, stress responses, motility and virulence in L. monocytogenes. This study establishes CodY as a multifaceted factor regulating L. monocytogenes physiology in a highly versatile manner.

  7. Penentuan Kadar COD Dan BOD Dalam Pengolahan Limbah Cair DIPKS PT. Multimas Nabati Asahan Kuala Tanjung

    OpenAIRE

    Lubis, Sherly Mayrina

    2011-01-01

    It has been done analysis of COD and BOD value of effluent in PKS PT.Multimas Nabati Asahan Kuala Tanjung on Finish Pond. From result of analysis is gitten by COD value is 239,53 mg/l and BOD value is 100,45 mg/l . As according to state’s minister citizenship and environment concerning standart of liquid quality for the palm oil industry, therefore the palm oil milling wastewater still fullfill standart to be thrown to water body.

  8. Production of cod trypsin I in cold-adapted expression systems

    OpenAIRE

    Karen Ósk Pétursdóttir 1985

    2012-01-01

    The aim of this research project was to produce recombinant cod trypsin I in two different cold-adapted protein expression systems, Escherichia coli and Pseudoalteromonas haloplanktis. The results show that the P. haloplanktis system is better suited for expression of the recombinant trypsin I than the E. coli system. The specific activity of the recombinant cod trypsin I was 39.8 U/mg in the P. haloplanktis expression system compared to 17.9 U/mg in previous expression experiments. For compa...

  9. Role of Branched-Chain Amino Acid Transport in Bacillus subtilis CodY Activity

    OpenAIRE

    Belitsky, Boris R.

    2015-01-01

    CodY is a branched-chain amino acid-responsive transcriptional regulator that controls the expression of several dozen transcription units in Bacillus subtilis. The presence of isoleucine, valine, and leucine in the growth medium is essential for achieving high activity of CodY and for efficient regulation of the target genes. We identified three permeases—BcaP, BraB, and BrnQ—that are responsible for the bulk of isoleucine and valine uptake and are also involved in leucine uptake. At least o...

  10. Impact of prey field variability on early cod larval survival: a sensitivity study of a Baltic cod Individual-based Model

    Directory of Open Access Journals (Sweden)

    Jörn O. Schmidt

    2008-06-01

    Full Text Available Baltic larval cod drift, growth and survival use idealised constructed mean prey fields of nauplius distributions. These simulations revealedthe best feeding conditions for Baltic cod larvae longer than 6 mm. For shorter, first feeding larvae (between 4.5 and 6 mm pronounced differences in growth and survival were observed,which depend on food availability and to a lesser degree on ambient temperature. We performed runs with an Individual-based Model (IBM for Baltic cod larvae in order to demonstrate hownatural variability in prey abundance influences the survival success of first feeding larvae. In the Baltic, this larval stage lives mainly between 20 and 40 m depth and feeds exclusivelyon the nauplii of different calanoid copepods (Acartia spp., Pseudocalanus acuspes, Temora longicornis and Centropages hamatus.Prey data obtained from vertically stratified samples in the Bornholm Basin (Baltic Sea in 2001 and 2002 indicate a strong variability at spatial and temporal scales. We calculatedlarval survival and growth in relation to natural variation of prey fields, i.e. species-specific nauplius abundance.The results of the model runs yielded larval survival rates from 60 to 100% if the mean size of nauplii species was taken and lower survival if prey consisted of early nauplius stages only.

  11. How Do Speakers Avoid Ambiguous Linguistic Expressions?

    Science.gov (United States)

    Ferreira, V.S.; Slevc, L.R.; Rogers, E.S.

    2005-01-01

    Three experiments assessed how speakers avoid linguistically and nonlinguistically ambiguous expressions. Speakers described target objects (a flying mammal, bat) in contexts including foil objects that caused linguistic (a baseball bat) and nonlinguistic (a larger flying mammal) ambiguity. Speakers sometimes avoided linguistic-ambiguity, and they…

  12. Exact enumeration of self-avoiding walks

    OpenAIRE

    Schram, Raoul D.; Barkema, Gerard T.; Bisseling, Rob H.

    2011-01-01

    A prototypical problem on which techniques for exact enumeration are tested and compared is the enumeration of self-avoiding walks. Here, we show an advance in the methodology of enumeration, making the process thousands or millions of times faster. This allowed us to enumerate self-avoiding walks on the simple cubic lattice up to a length of 36 steps.

  13. Strategic Family Therapy of Avoidant Behavior.

    Science.gov (United States)

    Burgess, Thomas A.; Hinkle, J. Scott

    1993-01-01

    Notes that Millon's biopsychosocial model asserts that socioenvironmental factors of parental or peer rejection may shape development of avoidant behavior but does not elaborate on how family system may perpetuate its existence once disorder has evolved. Presents brief overview of avoidant behavior and strategic family therapy case study.…

  14. 77 FR 67580 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Jig Gear in the...

    Science.gov (United States)

    2012-11-13

    ....20(d)(1)(iii) on June 29, 2012 (77 FR 39183, July 2, 2012). As of November 5, 2012, NMFS has... opening of the directed Pacific cod fishery by vessels using jig gear in the Central Regulatory Area of... Economic Zone Off Alaska; Pacific Cod by Vessels Using Jig Gear in the Central Regulatory Area of the...

  15. 77 FR 6683 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2012-02-09

    ... established by the final 2011 and 2012 harvest specifications for groundfish of the GOA (76 FR 11111, March 1, 2011), revision to the final 2012 harvest specifications for Pacific cod (76 FR 81860, December 29, 2011), and inseason adjustment to the final 2012 harvest specifications for Pacific cod (77 FR...

  16. 78 FR 7280 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2013-02-01

    ... established by the final 2012 and 2013 harvest specifications for groundfish of the GOA (77 FR 15194, March 14, 2012) and inseason adjustment to the final 2013 harvest specifications for Pacific cod (78 FR 267... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Western Regulatory Area of the...

  17. 77 FR 8177 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2012-02-14

    ... established by the final 2011 and 2012 harvest specifications for groundfish of the GOA (76 FR 11111, March 1, 2011), revision to the final 2012 harvest specifications for Pacific cod (76 FR 81860, December 29, 2011), and inseason adjustment to the final 2012 harvest specifications for Pacific cod (77 FR...

  18. 78 FR 10102 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2013-02-13

    ... established by the final 2012 and 2013 harvest specifications for groundfish of the GOA (77 FR 15194, March 14, 2012) and inseason adjustment to the final 2013 harvest specifications for Pacific cod (78 FR 267... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Central Regulatory Area of the...

  19. 77 FR 62464 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2012-10-15

    ... specifications for groundfish of the GOA (77 FR 15194, March 14, 2012). In accordance with Sec. 679.20(d)(1)(i... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Central Regulatory Area of the Gulf... for Pacific cod by vessels using pot gear in the Central Regulatory Area of the Gulf of Alaska...

  20. 77 FR 14305 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Jig Gear in the...

    Science.gov (United States)

    2012-03-09

    ... final 2011 and 2012 harvest specifications for groundfish of the GOA (76 FR 11111, March 1, 2011), revision to the final 2012 harvest specifications for Pacific cod (76 FR 81860, December 29, 2011), and inseason adjustment to the final 2012 harvest specifications for Pacific cod (77 FR 438, January 5,...

  1. 77 FR 65640 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the...

    Science.gov (United States)

    2012-10-30

    ....20(d)(1)(iii) on October 12, 2012 (77 FR 62464, October 15, 2012). As of October 23, 2012, NMFS has... opening of the directed Pacific cod fishery by vessels using pot gear in the Central Regulatory Area of... Economic Zone Off Alaska; Pacific Cod by Vessels Using Pot Gear in the Central Regulatory Area of the...

  2. Impact of the herbicide (RS)-MCPP on an anaerobic membrane bioreactor performance under different COD/nitrate ratios.

    Science.gov (United States)

    Yuzir, Ali; Chelliapan, Shreeshivadasan; Sallis, Paul J

    2012-04-01

    The degradation of (RS)-MCPP was investigated in an anaerobic membrane bioreactor (AnMBR) using nitrate as an available electron acceptor under different COD/NO(3)(-)-N ratios. Results showed high soluble COD removal efficiency (80-93%) when the reactor was operated at high COD/NO(3)(-)-N ratios. However, the COD removal started to decline (average 15%) at high nitrate concentrations coinciding with a drop in nitrate removal efficiency to 37%, suggesting that the denitrification activity dropped and affected the AnMBR performance when nitrate was the predominant electron acceptor. Additionally, the removal efficiency of (RS)-MCPP increased from 2% to 47% with reducing COD/NO(3)(-)-N ratios, whilst the (RS)-MCPP specific utilisation rate (SUR) was inversely proportional to the COD/NO(3)(-)-N ratio, suggesting that a lower COD/NO(3)(-)-N ratios had a positive influence on the (RS)-MCPP SUR. Although nitrate had a major impact on methane production rates, the methane composition was stable (approximately 80%) for COD/NO(3)(-)-N ratios of 23 or more. PMID:22318083

  3. 76 FR 37763 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod Allocations in the Gulf of...

    Science.gov (United States)

    2011-06-28

    ... Economic Zone Off Alaska; Pacific Cod Allocations in the Gulf of Alaska; Amendment 83 AGENCY: National... the Gulf of Alaska (FMP) to NMFS for review. If approved, Amendment 83 would establish Pacific cod allocations in the Central and Western Gulf of Alaska regulatory areas among various sectors and...

  4. 76 FR 44699 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod Allocations in the Gulf of...

    Science.gov (United States)

    2011-07-26

    ... (76 FR 11111, March 1, 2011). Figure 1. Map of State GHL Pacific cod management areas (South Alaska... Gulf of Alaska; Amendment 83; Proposed Rule #0;#0;Federal Register / Vol. 76 , No. 143 / Tuesday, July...; Pacific Cod Allocations in the Gulf of Alaska; Amendment 83 AGENCY: National Marine Fisheries...

  5. 76 FR 81872 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod Allocations in the Gulf of...

    Science.gov (United States)

    2011-12-29

    ... Economic Zone Off Alaska; Pacific Cod Allocations in the Gulf of Alaska; Amendment 83; Correction AGENCY... pertaining to Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Cod Allocations in the Gulf of... FR 74670) that revises several sections of regulations that pertain to the management of Pacific...

  6. A spectrum of CodY activities drives metabolic reorganization and virulence gene expression in Staphylococcus aureus.

    Science.gov (United States)

    Waters, Nicholas R; Samuels, David J; Behera, Ranjan K; Livny, Jonathan; Rhee, Kyu Y; Sadykov, Marat R; Brinsmade, Shaun R

    2016-08-01

    The global regulator CodY controls the expression of dozens of metabolism and virulence genes in the opportunistic pathogen Staphylococcus aureus in response to the availability of isoleucine, leucine and valine (ILV), and GTP. Using RNA-Seq transcriptional profiling and partial activity variants, we reveal that S. aureus CodY activity grades metabolic and virulence gene expression as a function of ILV availability, mediating metabolic reorganization and controlling virulence factor production in vitro. Strains lacking CodY regulatory activity produce a PIA-dependent biofilm, but development is restricted under conditions that confer partial CodY activity. CodY regulates the expression of thermonuclease (nuc) via the Sae two-component system, revealing cascading virulence regulation and factor production as CodY activity is reduced. Proteins that mediate the host-pathogen interaction and subvert the immune response are shut off at intermediate levels of CodY activity, while genes coding for enzymes and proteins that extract nutrients from tissue, that kill host cells, and that synthesize amino acids are among the last genes to be derepressed. We conclude that S. aureus uses CodY to limit host damage to only the most severe starvation conditions, providing insight into one potential mechanism by which S. aureus transitions from a commensal bacterium to an invasive pathogen. PMID:27116338

  7. The effect of COD loading on the granule-based enhanced biological phosphorus removal system and the recoverability.

    Science.gov (United States)

    Yu, Shenjing; Sun, Peide; Zheng, Wei; Chen, Lujun; Zheng, Xiongliu; Han, Jingyi; Yan, Tao

    2014-11-01

    In this study, the effect of varied COD loading (200, 400, 500, 600 and 800 mg L(-1)) on stability and recoverability of granule-based enhanced biological phosphorus removal (EBPR) system was investigated during continuously 53-d operation. Results showed that COD loading higher than 500 mg L(-1) could obviously deteriorate the granular EBPR system and result in sludge bulking with filamentous bacteria. High COD loading also changed the transformation patterns of poly-β-hydroxyalkanoates (PHAs) and glycogen in metabolism process of polyphosphate-accumulating organisms (PAOs) and inhibited the EPS secretion, which completely destroyed the stability and integrality of granules. Results of FISH indicated that glycogen-accumulating organisms (GAOs) and other microorganisms had a competitive advantage over PAOs with higher COD loading. The community composition and EBPR performance were recovered irreversibly in long time operation when COD loading was higher than 500 mg L(-1). PMID:25189512

  8. Change of Ecological Characteristics Due to Decrease of COD/SO42- Ratio During Sulfate-reduction

    Institute of Scientific and Technical Information of China (English)

    王爱杰; 任南琪; 刘广民; 杜大仲

    2004-01-01

    In order to investigate the change of ecological characteristics due to the decrease of COD/SO42- ratio during sulfate reduction, continuous-flew tests were conducted in an acidogenic sulfate-reducing reactor with molasses wastewater as sole organic carbon source and sodium sulfate as electron acceptor, and the change of pH value, oxidation reduction potential (ORP), volatile fat acids (VFAs), alkalinity (ALK) and the predominant populations with COD/SO42- ratio decreasing from 4. 2 to 2. 0 were investigated. The experimental results demonstrated that, with decreasing COD/SO42- ratio, ORP and ALK increased, pH value decreased, and the proportion of acetic acid in terminal products decreased significantly, and a stable - type microbial community with high COD/SO42- ratio was converted into a sub -stable -type one with low COD/SO42- ratio.

  9. Effect of sludge retention time on continuous-flow system with enhanced biological phosphorus removal granules at different COD loading.

    Science.gov (United States)

    Li, Dong; Lv, Yufeng; Zeng, Huiping; Zhang, Jie

    2016-11-01

    The effect of sludge retention time (SRT) on the continuous-flow system with enhanced biological phosphorus removal (EBPR) granules at different COD loading was investigated during the operation of more than 220days. And the results showed that when the system operated at long SRT (30days) and low COD loading (200mg·L(-1)), it could maintain excellent performance. However, long SRT and high COD loading (300mg·L(-1)) deteriorated the settling ability of granules and the performance of system and resulted in the overgrowth of filamentous bacteria. Meanwhile, the transformation of poly-β-hydroxyalkanoates (PHAs) and glycogen in metabolism process was inhibited. Moreover, the results of pyrosequencing indicated that filamentous bacteria had a competitive advantage over polyphosphate-accumulating organisms (PAOs) at high COD loading and long SRT. The PAOs specious of Candidatus_Accumlibater and system performance increased obviously when the SRT was reduced to 20days at high COD loading. PMID:27472749

  10. Freshness assessment of thawed and chilled cod fillets packed in modified atmosphere using near-infrared spectroscopy

    DEFF Research Database (Denmark)

    Bøknæs, Niels; Jensen, K.N.; Andersen, Charlotte Møller;

    2002-01-01

    Near-infrared reflectance (NIR) spectra was recorded of 105 samples of cod mince prepared from chill stored thawed cod fillets of varying quality in modified atmosphere packaging (MAP). Traditional chemical, physical, microbiological and sensory quality methods developed for assessing fresh fish...... products were determined on the same cod fillets. The purpose was to evaluate the potential of NIR spectroscopy for estimating (i) frozen storage temperature, (ii) frozen storage period and (iii) chill storage period of thawed-chilled MAP Barents Sea cod fillets. Furthermore, the potential for measuring of......). Systematic differences in the NIR measurements on minced cod fillets were primarily due to the chill storage duration (days at 2 degreesC) on thawed-chilled MAP fillets. PLSR models based on wavelengths selected by a new Jack-knife method resulted in a correlation coefficient of 0.90 between measured and...

  11. Effects of Technological Parameters and Fishing Ground on Quality Attributes of Thawed, Chilled Cod Fillets Stored in Modified Atmosphere Packaging

    DEFF Research Database (Denmark)

    Bøknæs, Niels; Østerberg, Carsten; Sørensen, Rie;

    2001-01-01

    Effects were studied of various technological parameters and fishing ground on quality attributes of thawed, chilled cod fillets stored in modified atmosphere packaging Frozen fillets of Baltic Sea and Barents Sea cod, representing two commercial fishing grounds, were used as raw material....... The parameters investigated were: (1) packaging in modified atmosphere during frozen storage, (2)frozen storage period and temperature, (3),fishing ground and chill storage temperature, together with (4) the addition of trimethylamine oxide (TMAO) and sodium chloride (NaCl) to cod fillets before freezing...... or after freezing and thawing, Application of MAP during frozen storage resulted in a significant increase in the drip loss of thawed, chilled MAP cod fillets but none of the other quality attributes studied were influenced by this treatment. This implies that packaging cod fillets without MAP during...

  12. APPLICATION OF ELECTROCHEMICAL METHODS FOR DECREASING OF CHEMICAL OXYGEN DEMAND (COD AND TOTAL SUSPENDED SOLID (TSS OF TOFU INDUSTRIAL WASTEWATER

    Directory of Open Access Journals (Sweden)

    Suyata

    2015-05-01

    Full Text Available Tofu industrial wastewater has high COD and TSS level, which it cause an environmental pollution. Therefore, it is necessary to decrease the value of COD and TSS of tofu industrial wastewater before discharge into the water body. Decreasing of COD and TSS values can be carried out using an electrochemical method. The purpose of this research was to determine the effect of potential, electrode distance, pH, and time to decrease of COD and TSS value of the tofu industrial wastewater. The experiment has been performed by electrolysis tofu industrial wastewater using PbO2 as anode and Pb as cathode. The result of the research showed that under the optimum conditions of 12 V voltage, 1 cm electrode distance, pH 1, and electrolysis time of 120 minutes, decreasing COD and TSS of 96.33% and 87.87% respectively

  13. 77 FR 62257 - Draft Environmental Impact Statement for the Herring River Restoration Project, Cape Cod National...

    Science.gov (United States)

    2012-10-12

    ...The National Park Service (NPS) announces the availability of a Draft Environmental Impact Statement (DEIS) for the Herring River Restoration Project in Cape Cod National Seashore, Massachusetts. The DEIS provides a systematic analysis of alternative approaches to restore the Herring River estuary to a more productive and natural condition after a century of diking and...

  14. Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod.

    Science.gov (United States)

    Berg, Paul R; Star, Bastiaan; Pampoulie, Christophe; Sodeland, Marte; Barth, Julia M I; Knutsen, Halvor; Jakobsen, Kjetill S; Jentoft, Sissel

    2016-01-01

    Identification of genome-wide patterns of divergence provides insight on how genomes are influenced by selection and can reveal the potential for local adaptation in spatially structured populations. In Atlantic cod - historically a major marine resource - Northeast-Arctic- and Norwegian coastal cod are recognized by fundamental differences in migratory and non-migratory behavior, respectively. However, the genomic architecture underlying such behavioral ecotypes is unclear. Here, we have analyzed more than 8.000 polymorphic SNPs distributed throughout all 23 linkage groups and show that loci putatively under selection are localized within three distinct genomic regions, each of several megabases long, covering approximately 4% of the Atlantic cod genome. These regions likely represent genomic inversions. The frequency of these distinct regions differ markedly between the ecotypes, spawning in the vicinity of each other, which contrasts with the low level of divergence in the rest of the genome. The observed patterns strongly suggest that these chromosomal rearrangements are instrumental in local adaptation and separation of Atlantic cod populations, leaving footprints of large genomic regions under selection. Our findings demonstrate the power of using genomic information in further understanding the population dynamics and defining management units in one of the world's most economically important marine resources. PMID:26983361

  15. Consumer perception of wild and farmed cod and the effect of different information conditions

    NARCIS (Netherlands)

    Kole, A.; Schelvis-Smit, A.A.M.; Veldman, M.; Luten, J.B.

    2003-01-01

    The influence of product information on the consumer perception of fillets of wild and farmed cod was examined in a real in-home environment, in order to establish the external validity of these influences. Main effects in this study were observed for information about product type and for price. In

  16. Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod

    Science.gov (United States)

    Berg, Paul R.; Star, Bastiaan; Pampoulie, Christophe; Sodeland, Marte; Barth, Julia M. I.; Knutsen, Halvor; Jakobsen, Kjetill S.; Jentoft, Sissel

    2016-01-01

    Identification of genome-wide patterns of divergence provides insight on how genomes are influenced by selection and can reveal the potential for local adaptation in spatially structured populations. In Atlantic cod – historically a major marine resource – Northeast-Arctic- and Norwegian coastal cod are recognized by fundamental differences in migratory and non-migratory behavior, respectively. However, the genomic architecture underlying such behavioral ecotypes is unclear. Here, we have analyzed more than 8.000 polymorphic SNPs distributed throughout all 23 linkage groups and show that loci putatively under selection are localized within three distinct genomic regions, each of several megabases long, covering approximately 4% of the Atlantic cod genome. These regions likely represent genomic inversions. The frequency of these distinct regions differ markedly between the ecotypes, spawning in the vicinity of each other, which contrasts with the low level of divergence in the rest of the genome. The observed patterns strongly suggest that these chromosomal rearrangements are instrumental in local adaptation and separation of Atlantic cod populations, leaving footprints of large genomic regions under selection. Our findings demonstrate the power of using genomic information in further understanding the population dynamics and defining management units in one of the world’s most economically important marine resources. PMID:26983361

  17. Three-way modelling of NMR relaxation profiles from thawed cod muscle

    DEFF Research Database (Denmark)

    Jensen, Kristina Nedenskov; Guldager, Helle Skov; Jørgensen, Bo Munk

    2002-01-01

    Low-field 1H nuclear magnetic resonance transverse relaxation was used to measure water mobility and distribution in cod stored at -20°C or -30°C for up to 12 months and subsequently from 0 to 21 days in modified atmosphere at +2°C. The relaxation profiles were decomposed by parallel factor...

  18. Improved management based on stock identification of eastern and western Baltic cod

    DEFF Research Database (Denmark)

    Hüssy, Karin; Bastardie, Francois; Eero, Margit; Hansen, Jakob Hemmer; Mosegaard, Henrik; Nielsen, J. Rasmus

    ) within the “Western” cod’s management unit was documented using high-powered genetic tools. The majority (91%) of all spawning fish caught in SD 24 in 2011 were “Eastern” cod and only 9% were from the “Western” stock. The results suggest that the stock structure in the Arkona Basin is highly influenced...

  19. Specific inhibition of Photobacterium phosphoreum extends the shelf life of modified-atmosphere-packed cod fillets

    DEFF Research Database (Denmark)

    Dalgaard, Paw; Munoz, L.G.; Mejlholm, Ole

    1998-01-01

    rather than the development of a new product. In naturally contaminated modified-atmosphere-packed cod fillets, 500 ppm Na(2)CaEDTA reduced the growth rate of P. phosphoreum by 40% and shelf life was increased proportionally by 40%, from 15 to 17 days to 21 to 23 days at 0 degrees C. In aerobically...

  20. An obstacle to China's WWTPs: the COD and BOD standards for discharge into municipal sewers.

    Science.gov (United States)

    Liao, Zhenliang; Hu, Tiantian; Roker, Scott Albert C

    2015-11-01

    In 2001, a construction campaign regarding wastewater treatment plants (WWTPs) occurred in China. Unfortunately, the treatment has not yet achieved anticipated effectiveness. A critical reason for this is that the influent chemical oxygen demand (COD) and biochemical oxygen demand (BOD) concentrations in WWTPs are unacceptably low. This paper indicates that a fundamental, but commonly overlooked contributing factor to this problem is that a large portion of easily degradable COD and BOD is degraded prematurely before entering municipal sewers, and this is directly correlated to China's standards for pollutant discharging into municipal sewers. This perspective is further unfolded through retrospection of the history of Chinese wastewater treatment and the investigation of standards among developed zones and districts. This paper suggests that in China, the standards for pollutant discharging into municipal sewers should be relaxed. Meanwhile, unnecessary pretreatment of COD and BOD should cease for the purpose of ensuring that easily degradable COD and BOD can be transferred to WWTPs to improve treatment efficiency. Moreover, additional alternatives are presented to resolve this problem. PMID:26341334