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Sample records for avena avena sativa

  1. Utilización de extractos de avena sativa l. en dermatitis Utilization of avena sativa l. extract in dermatitis

    Directory of Open Access Journals (Sweden)

    L López Agüero

    2006-06-01

    Full Text Available Los polifenoles (flavonoides y antocianinas están ampliamente distribuidos entre las diferentes especies vegetales. Estos poseen gran capacidad antioxidante; existiendo correlación positiva entre la actividad antioxidante y los polifenoles totales. El objetivo de este trabajo fue evaluar: 1° El contenido de polifenoles y antocianas totales de semillas, glumelas y extracto acuoso de Avena sativa L. 2° El efecto de la aplicación tópica de extracto acuoso de avena en 45 casos (10 mujeres y 35 hombres, entre 1 y 56 años de edad con dermatitis atópica, dermatitis de contacto irritativa y dermatitis de contacto alérgica; y 30 controles normales (15 mujeres y 15 hombres, entre 1 y 60 años de edad. Tratamiento: aplicación de compresas del extracto crudo de avena en la piel dañada durante 5 minutos, seguida de la colocación de la biomasa (T°= 33 + 2°C cubierta por una tela de gasa durante 5 minutos. Dicha biomasa se retira con el extracto de avena líquido. Entre 1 y 36 meses de iniciado el tratamiento se observó remisión de los síntomas cutáneos. El extracto acuoso, la biomasa de Avena sativa L., glumelas y semillas enteras contenían 6.12+0,45, 46,11+0,36, 212,81+0,19 y 286,60+0,50 mg/100 g ác. Gálico, respectivamente, de polifenoles totales.Polyphenols (flavonoids and anthocyanins are widely spread among the different vegetables species. They have a big antioxidant capacity. One important correlation exists between the antioxidant activity and the quantity of total polyphenols. The objective of this work was to evaluate: 1- the contents of polyphenols and anthocyanins of whole seeds, glumes and aqueous extract of Avena Sativa L., 2- the effects of topical application of aqueous extract of Avena sativa L. in 45 patients (10 females and 35 males, between 1 and 56 years olds with Atopic Dermatitis, Contact Irritative Dermatitis and Contact Allergic Dermatitis, and 30 normal controls (15 females and 15 males, between 1 and 60 years

  2. Development of resistance to Puccinia graminis avenae in Avena sativa by mutagen treatment

    International Nuclear Information System (INIS)

    Martens, J.W.; Brown, P.D.; McKenzie, R.I.H.; Harder, D.E.

    1983-01-01

    The evaluation of over seven million M 2 oat plants derived from irradiated and chemical mutagen treated seeds (about 50,000) or low-level chronically irradiated growing plants produced no new sources of useful resistance. However, preliminary results indicate that the gene Pg-16 has been transferred from the tetraploid Avena barbata L. to the hexaploid A. sativa L. by irradiation of disomic alien addition lines and monosomic alien substitution lines. This gene is highly effective and confers resistance to all but two of the known races of stem rust occurring in North America. (author)

  3. Metabolic changes in Avena sativa crowns recovering from freezing.

    Science.gov (United States)

    Henson, Cynthia A; Duke, Stanley H; Livingston, David P

    2014-01-01

    Extensive research has been conducted on cold acclimation and freezing tolerance of fall-sown cereal plants due to their economic importance; however, little has been reported on the biochemical changes occurring over time after the freezing conditions are replaced by conditions favorable for recovery and growth such as would occur during spring. In this study, GC-MS was used to detect metabolic changes in the overwintering crown tissue of oat (Avena sativa L.) during a fourteen day time-course after freezing. Metabolomic analysis revealed increases in most amino acids, particularly proline, 5-oxoproline and arginine, which increased greatly in crowns that were frozen compared to controls and correlated very significantly with days after freezing. In contrast, sugar and sugar related metabolites were little changed by freezing, except sucrose and fructose which decreased dramatically. In frozen tissue all TCA cycle metabolites, especially citrate and malate, decreased in relation to unfrozen tissue. Alterations in some amino acid pools after freezing were similar to those observed in cold acclimation whereas most changes in sugar pools after freezing were not. These similarities and differences suggest that there are common as well as unique genetic mechanisms between these two environmental conditions that are crucial to the winter survival of plants.

  4. Transferability and utility of white oat (Avena sativa) microsatellite markers for genetic studies in black oat (Avena strigosa).

    Science.gov (United States)

    Da-Silva, P R; Milach, S C K; Tisian, L M

    2011-11-29

    Preservation and use of wild oat species germplasm are essential for further improvement of cultivated oats. We analyzed the transferability and utility of cultivated (white) oat Avena sativa (AACCDD genome) microsatellite markers for genetic studies of black oat A. strigosa (A(s)A(s) genome) genotypes. The DNA of each black oat genotype was extracted from young leaves and amplified by PCR using 24 microsatellite primers developed from white oat. The PCR products were separated on 3% agarose gel. Eighteen microsatellite primer pairs amplified consistent products and 15 of these were polymorphic in A. strigosa, demonstrating a high degree of transferability. Microsatellite primer pairs AM3, AM4, AM21, AM23, AM30, and AM35 consistently amplified alleles only in A. sativa, which indicates that they are putative loci for either the C or D genomes of Avena. Using the data generated by the 15 polymorphic primer pairs, it was possible to separate 40 genotypes of the 44 that we studied. The four genotypes that could not be separated are probably replicates. We conclude that A. sativa microsatellites have a high transferability index and are a valuable resource for genetic studies and characterization of A. strigosa genotypes.

  5. Metabolism of proteins in developing leaves of oats (Avena sativa L.)

    NARCIS (Netherlands)

    Klerk, H.

    1989-01-01

    The development of the first leaf of oats ( Avena sativa L.) comprises four phases. About 4 day after sowing the leaf emerges and starts to expand. Expansion is complete and maturity is reached at 7 to 9 days. Thereafter, senescence ensues, as expressed by a gradual

  6. Serpins of oat (Avena sativa) grain with distinct reactive centres and inhibitory specificity

    DEFF Research Database (Denmark)

    Hejgaard, Jørn; Hauge, S.

    2002-01-01

    Most proteinase inhibitors from plant seeds are assumed to contribute to broad-spectrum protection against pests and pathogens. In oat (Avena sativa L.) grain the main serine proteinase inhibitors were found to be serpins, which utilize a unique mechanism of irreversible inhibition. Four distinct...

  7. Discrimination of the closely related A and D genomes of the hexaploid oat Avena sativa L.

    Science.gov (United States)

    Linares, Concha; Ferrer, Esther; Fominaya, Araceli

    1998-01-01

    A satellite DNA sequence, As120a, specific to the A-genome chromosomes in the hexaploid oat, Avena sativa L., was isolated by subcloning a fragment with internal tandem repeats from a plasmid, pAs120, that had been obtained from an Avena strigosa (As genome) genomic library. Southern and in situ hybridization showed that sequences with homology to sequences within pAs120 were dispersed throughout the genome of diploid (A and C genomes), tetraploid (AC genomes), and hexaploid (ACD genomes) Avena species. In contrast, sequences homologous to As120a were found in two A-genome species (A. strigosa and Avena longiglumis) and in the hexaploid A. sativa whereas this sequence was little amplified in the tetraploid Avena murphyi and was absent in the remaining A- and C-genome diploid species. In situ hybridization of pAs120a to hexaploid oat species revealed the distribution of elements of the As120a repeated family over both arms of 14 of 42 chromosomes of this species. By using double in situ hybridization with pAs120a and a C genome-specific probe, three sets of 14 chromosomes were revealed corresponding to the A, C, and D genomes of the hexaploid species. Simultaneous in situ hybridizations with pAs120a and ribosomal probes were used to assign the SAT chromosomes of hexaploid species to their correct genomes. This work reports a sequence able to distinguish between the closely related A and D genomes of hexaploid oats. This sequence offers new opportunities to analyze the relationships of Avena species and to explore the possible evolution of various polyploid oat species. PMID:9770506

  8. Mechanisms of oat (Avena sativa L.) acclimation to phosphate deficiency

    Science.gov (United States)

    Milewska, Marta

    2017-01-01

    Background Deficiency of available forms of phosphorus is common in most soils and causes reduction of crop plants growth and yield. Recently, model plants responses to phosphate (Pi) deficiency have been intensively studied. However, acclimation mechanisms of cereals like oat (Avena sativa L.), to low Pi stress remains not fully understood. Oat plants have been usually cultured on poor soils, with a low nutrient content, but their responses to such conditions are not well known, therefore the main goal of the study was to investigate the mechanisms that enable oat plants to grow under low Pi conditions. Methods Four oat cultivars (A. sativa, cv. Arab, Krezus, Rajtar and Szakal) were grown for three weeks in a nutrient media with various P sources: inorganic—KH2PO4 (control), organic—phytate (PA) and with no phosphate (−P). The effects of Pi deficiency on the level of P, oat growth parameters, intensity of photosynthesis, plant productivity, root exudation ability, localization, activity and isoforms of acid phosphatases, enzymes involved in Pi mobilization, were estimated. In addition, the effect of mycorrhization on plant growth was also observed. Results All studied oat cultivars grown on Pi-deficient media had significantly decreased Pi content in the tissues. Pi deficiency caused inhibition of shoot growth, but generally it did not affect root elongation; root diameter was decreased, root/shoot ratios increased, whereas PA plants showed a similar growth to control. Photosynthesis rate and productivity parameters decreased under low Pi nutrition, however, sugar content generally increased. Studied oat cultivars did not respond to low Pi via increased exudation of carboxylates from the roots, as pH changes in the growth media were not observed. Pi starvation significantly increased the activity of extracellular and intracellular acid phosphatases (APases) in comparison to the control plants. Three major APase isoforms were detected in oat tissues and the

  9. TOXICITY OF METHYL-TERT BYTYL ETHER (MTBE) TO PLANTS (AVENA SATIVA, ZEA MAYS, TRITICUM AESTIVUM, AND LACTUCA SATIVA)

    Science.gov (United States)

    Effects of Methyl tert-butyl ether (MTBE) on the germination of seeds and growth of the plant were studied in some laboratory experiments. Test plants were wild oat (Avena sative), sweet corn (Zea mays), wheat (Triticum aestivum), and lettuce (Lactuca sativa). Seed germination,...

  10. Bioprocesų taikymas avena sativa gėrimų gamyboje

    OpenAIRE

    Lukoševičius, Rolandas

    2016-01-01

    The aim of the research: to evaluate impact of biological processes (microbial fermentation) on physical, chemical, organoleptic parameters and viscoelastic properties of the drinks made from Avena sativa. During the experiment twenty samples were made (including ten samples of oat drink fermented with Pediococcus pentosaceus KTU05-10). pH, lactic acid bacteria colony forming units per gram of the product (LAB cfu/g), total titratable acidity (TTA), dry matter and β–glucan content in sampl...

  11. Comparison of Avena sativa, vinegar, and hydroxyzine for uremic pruritus of hemodialysis patients: a crossover randomized clinical trial.

    Science.gov (United States)

    Nakhaee, Samaneh; Nasiri, Ahmad; Waghei, Yadollah; Morshedi, Jamileh

    2015-07-01

    Uremic pruritus is a common complication in patients with chronic kidney disease. While its cause is not known for certain, different treatments are currently applied. This study aimed to compare the effects of Avena sativa, diluted vinegar, and hydroxyzine on the reduction of uremic pruritus. In this crossover randomized clinical trial, 23 hemodialysis patients with uremic pruritus were randomly divided into 3 groups. The first group was treated with Avena sativa lotion, twice a day, for as long as 2 weeks; the second group received diluted vinegar; and the third group took hydroxyzine tablets for the same time span. After 3-day-long washout periods, the therapeutic methods were crossed over. The data were collected by a pruritus scale and a visual analogue scale, which were completed before and after the interventions. Avena sativa lotion significantly decreased the mean scores of pruritus intensity, consequences, and the verbal descriptor, although it did not have a significant effect on the frequency of pruritus and the pruritic surface. Vinegar and hydroxyzine significantly decreased all of the scores.  Conclusions. Avena sativa, vinegar, and hydroxyzine were effective in decreasing pruritus. Diluted vinegar and Avena sativa can be used as a complement to hydroxyzine, which is itself a common pharmaceutical therapy.

  12. Quantification of conidia produced by Pyrenophora chaetomioides on dead leaves of Avena sativa under field condition

    OpenAIRE

    Rosa, Carlos R. E. da; Martinelli, José A.; Federizzi, Luiz C.; Bocchese, Carla A. C.

    2003-01-01

    Procurou-se quantificar a produção de conídios por Pyrenophora chaetomioides sobre folhas mortas de aveia branca (Avena sativa), e relacionar essas observações com as condições de temperatura e precipitação ocorridas no período. Foram coletadas regularmente folhas mortas da superfície das parcelas experimentais, onde se realizou a contagem dos conídios. Os resultados mostraram que a quantidade de conídios produzidos diminuiu com o atraso na semeadura da cultura. Além disso, a produção de coní...

  13. Physiological biosafety assessment of genetically modified canola on weed (Avena sativa).

    Science.gov (United States)

    Syed, Kashmala; Shinwari, Zabta Khan

    2016-03-01

    The present study was carried out for the assessment of physiological biosafety and effects of genetically modified (GM) canola on Avena sativa, which is a common weed plant of South Asia. Methanolic extracts of GM and non-GM canola were assessed on seed germination and growth of A. sativa under sterilized conditions. The extracts were treated with 3%, 5%, and 10% concentrations of methanol. Results showed that the extract of GM canola increases the number of roots and root fresh weight. However, root length was significantly decreased. Similarly, a significant rate of increase was observed in shoot fresh weight and shoot length of A. sativa by treatment of GM canola. Emergence percentage, germination index, and emergence rate index show a significant effect of decrease when treated with GM canola. © The Author(s) 2013.

  14. Elongation growth of the leaf sheath base of Avena sativa seedlings: regulation by hormones and sucrose

    Science.gov (United States)

    Brock, T. G.; Kaufman, P. B.

    1991-01-01

    The leaf sheath base of the seedling of Avena sativa was characterized for growth response to hormones and sucrose. Six day old plants, raised under a 10:14 hr light:dark cycle, were excised at the coleoptilar node and 1 cm above the node for treatment. The growth of the leaf sheath base was promoted by gibberellic acid (GA3) and this response was dose dependent. The lag to response initiation was approximately 4 hr. Growth with or without GA3 (10 micromoles) was transient, diminishing appreciably after 48 hr. The addition of 10 mM sucrose greatly prolonged growth; the effect of GA3 and sucrose was additive. Neither indole-3-acetic acid (IAA) nor the cytokinin N6-benzyladenine (BA), alone or in combination, promoted the growth of leaf sheath bases. However, both significantly inhibited the action of GA3. The inhibitory effect of IAA was dose dependent and was not affected by the addition of BA or sucrose. These results indicate that the growth of leaf sheath bases of Avena sativa is promoted specifically by gibberellin, that this action depends on the availability of carbohydrates from outside of the leaf sheath base, and that the promotional effect of GA3 can be modified by either auxins or cytokinins.

  15. Genetic variation and associations involving Fusarium head blight and deoxynivalenol accumulation in cultivated oat (Avena sativa L.)

    Science.gov (United States)

    Resistance in oats (Avena sativa L.) to infection by Fusarium graminearum was assessed in field trials in 2011-12 including 424 spring oat lines from North America and Scandinavia. Traits measured were Fusarium Head Blight (FHB), deoxynivalenol (DON) content, days to flowering (DTF) and days to matu...

  16. A base-catalyzed mechanism for dark state recovery in the Avena sativa phototropin-1 LOV2 domain.

    NARCIS (Netherlands)

    Alexandre, M.T.A.; Arents, J.C.; van Grondelle, R.; Hellingwerf, K.J.; Kennis, J.T.M.

    2007-01-01

    Phototropins are autophosphorylating serine/threonine kinases responsible for blue-light perception in plants; their action gives rise to phototropism, chloroplast relocation, and opening of stomatal guard cells. The kinase domain constitutes the C-terminal part of Avena sativa phototropin 1. The

  17. Genome-wide association mapping of barley yellow dwarf virus tolerance in spring oat (Avena sativa L.)

    Science.gov (United States)

    Barley yellow dwarf (BYD) is one of the most destructive diseases of cereal crops worldwide. Barley yellow dwarf viruses (BYDVs) are responsible for BYD and affect many cereals including oat (Avena sativa L.). Until recently, the molecular marker technology in oat has not allowed for many marker-t...

  18. Isolation and characterization of novel microsatellite markers for Avena sativa (Poaceae) (oat).

    Science.gov (United States)

    Wu, Bin; Zhang, Zongwen; Chen, Lingyun; He, Minggao

    2012-02-01

    A new set of microsatellite primers was developed for Avena sativa and characterized to assess the level of genetic diversity among cultivars and wild genotypes. Using an enrichment genomic library, 14 simple sequence repeat markers were identified. The loci of these markers were characterized and found to be polymorphic in size among 48 genotypes of oat from diverse geographical locations. The number of alleles per locus ranged from two to eight, while the observed heterozygosity ranged from 0.031 to 0.75. These newly identified microsatellite markers will facilitate genetic diversity studies, fingerprinting, and genetic mapping of oat. Moreover, these new primers for A. sativa will aid future studies of polyploidy and hybridization in other species in this genus.

  19. Revised structures of avenacosides A and B and a new sulfated saponin from Avena sativa L.

    Science.gov (United States)

    Pecio, Łukasz; Jędrejek, Dariusz; Masullo, Milena; Piacente, Sonia; Oleszek, Wiesław; Stochmal, Anna

    2012-11-01

    The revised structures of avenacosides A and B and a new sulfated steroidal saponin isolated from grains of Avena sativa L. were elucidated. Their structures and complete NMR assignments are based on 1D and 2D NMR studies and identified as nuatigenin 3-O-{α-L-rhamnopyranosyl-(1→2)-[β-D-glucopyranosyl-(1→4)]-β-D-glucopyranoside}-26-O-β-D-glucopyranoside (1), nuatigenin 3-O-{α-L-rhamnopyranosyl-(1→2)-[β-D-glucopyranosyl-(1→3)-β-D-glucopyranosyl-(1→4)]-β-D-glucopyranoside}-26-O-β-D-glucopyranoside (2), and nuatigenin 3-O-{α-L-rhamnopyranosyl-(1→2)-[β-D-6-O-sulfoglucopyranosyl-(1→4)]-β-D-glucopyranoside}-26-O-β-D-glucopyranoside (3). Copyright © 2012 John Wiley & Sons, Ltd.

  20. Avena sativa (Oat), a potential neutraceutical and therapeutic agent: an overview.

    Science.gov (United States)

    Singh, Rajinder; De, Subrata; Belkheir, Asma

    2013-01-01

    The aim of the present review article is to summarize the available information related to the availability, production, chemical composition, pharmacological activity, and traditional uses of Avena sativa to highlight its potential to contribute to human health. Oats are now cultivated worldwide and form an important dietary staple for the people in number of countries. Several varieties of oats are available. It is a rich source of protein, contains a number of important minerals, lipids, β-glucan, a mixed-linkage polysaccharide, which forms an important part of oat dietary fiber, and also contains various other phytoconstituents like avenanthramides, an indole alkaloid-gramine, flavonoids, flavonolignans, triterpenoid saponins, sterols, and tocols. Traditionally oats have been in use since long and are considered as stimulant, antispasmodic, antitumor, diuretic, and neurotonic. Oat possesses different pharmacological activities like antioxidant, anti-inflammatory, wound healing, immunomodulatory, antidiabetic, anticholesterolaemic, etc. A wide spectrum of biological activities indicates that oat is a potential therapeutic agent.

  1. Allelopathy of rice: effect of rice mulching on the growth of avena sativa

    International Nuclear Information System (INIS)

    Shah, M.H.; Khan, S.N.; Bashir, U.; Bajwa, R.

    2013-01-01

    Implementation of suitable weed management practice is a critical step in crop production technology to reduce the competition for water, nutrients, space and light between the economically important crops and weeds. Mechanical, chemical or biological agents are being used by the farmer community to cope with the weed problem but these methods are specific in nature, expensive and detrimental to ecosystem. Allelopathy is a cost-effective and environment friendly approach replacing the previous techniques. Therefore, keeping in view the role of rice mulching in weed management, the present study was designed to manipulate the allelopathic traits of rice for the control of Avena sativa in a field trial during which it was grown in non-mulch and rice mulch regimes of different concentrations. (author)

  2. Serpins of oat (Avena sativa) grain with distinct reactive centres and inhibitory specificity

    DEFF Research Database (Denmark)

    Hejgaard, Jørn; Hauge, S.

    2002-01-01

    Most proteinase inhibitors from plant seeds are assumed to contribute to broad-spectrum protection against pests and pathogens. In oat (Avena sativa L.) grain the main serine proteinase inhibitors were found to be serpins, which utilize a unique mechanism of irreversible inhibition. Four distinct...... inhibitors of the serpin superfamily were detected by native PAGE as major seed albumins and purified by thiophilic adsorption and anion exchange chromatography. The four serpins OSZa-d are the first proteinase inhibitors characterized from this cereal. An amino acid sequence close to the blocked N...... by chymotrypsin at the putative reactive centre bond P-1 -P-1 ' Tyrdown arrowSer, and no inhibition was detected. Together the oat grain serpins have a broader inhibitory specificity against digestive serine proteinases than represented by the major serpins of wheat, rye or barley grain. Presumably the serpins...

  3. Cell wall and enzyme changes during the graviresponse of the leaf-sheath pulvinus of oat (Avena sativa)

    Science.gov (United States)

    Gibeaut, David M.; Karuppiah, Nadarajah; Chang, S.-R.; Brock, Thomas G.; Vadlamudi, Babu; Kim, Donghern; Ghosheh, Najati S.; Rayle, David L.; Carpita, Nicholas C.; Kaufman, Peter B.

    1990-01-01

    The graviresponse of the leaf-sheath pulvinus of oat (Avena sativa) involves an asymmetric growth response and asymmetric processes involving degradation of starch and cell wall synthesis. Cellular and biochemical events were studied by investigation of the activities of related enzymes and changes in cell walls and their constituents. It is suggested that an osmotic potential gradient acts as the driving factor for growth, while wall extensibility is a limiting factor in pulvinus growth.

  4. Characterization of copper-resistant rhizosphere bacteria from Avena sativa and Plantago lanceolata for copper bioreduction and biosorption.

    Science.gov (United States)

    Andreazza, Robson; Okeke, Benedict C; Pieniz, Simone; Camargo, Flávio A O

    2012-04-01

    Copper is a toxic heavy metal widely used to microbial control especially in agriculture. Consequently, high concentrations of copper residues remain in soils selecting copper-resistant organisms. In vineyards, copper is routinely used for fungi control. This work was undertaken to study copper resistance by rhizosphere microorganisms from two plants (Avena sativa L. and Plantago lanceolata L.) common in vineyard soils. Eleven rhizosphere microorganisms were isolated, and four displayed high resistance to copper. The isolates were identified by 16S rRNA gene sequence analysis as Pseudomonas putida (A1), Stenotrophomonas maltophilia (A2) and Acinetobacter sp. (A6), isolated from Avena sativa rhizosphere, and Acinetobacter sp. (T5), isolated from Plantago lanceolata rhizosphere. The isolates displayed high copper resistance in the temperature range from 25°C to 35°C and pH in the range from 5.0 to 9.0. Pseudomonas putida A1 resisted as much as 1,000 mg L(-1) of copper. The isolates showed similar behavior on copper removal from liquid medium, with a bioremoval rate of 30% at 500 mg L(-1) after 24 h of growth. Speciation of copper revealed high copper biotransformation, reducing Cu(II) to Cu(I), capacity. Results indicate that our isolates are potential agents for copper bioremoval and bacterial stimulation of copper biosorption by Avena sativa and Plantago lanceolata.

  5. Generation and analysis of 9792 EST sequences from cold acclimated oat, Avena sativa

    Science.gov (United States)

    Bräutigam, Marcus; Lindlöf, Angelica; Zakhrabekova, Shakhira; Gharti-Chhetri, Gokarna; Olsson, Björn; Olsson, Olof

    2005-01-01

    Background Oat is an important crop in North America and northern Europe. In Scandinavia, yields are limited by the fact that oat cannot be used as a winter crop. In order to develop such a crop, more knowledge about mechanisms of cold tolerance in oat is required. Results From an oat cDNA library 9792 single-pass EST sequences were obtained. The library was prepared from pooled RNA samples isolated from leaves of four-week old Avena sativa (oat) plants incubated at +4°C for 4, 8, 16 and 32 hours. Exclusion of sequences shorter than 100 bp resulted in 8508 high-quality ESTs with a mean length of 710.7 bp. Clustering and assembly identified a set of 2800 different transcripts denoted the Avena sativa cold induced UniGene set (AsCIUniGene set). Taking advantage of various tools and databases, putative functions were assigned to 1620 (58%) of these genes. Of the remaining 1180 unclassified sequences, 427 appeared to be oat-specific since they lacked any significant sequence similarity (Blast E values > 10-10) to any sequence available in the public databases. Of the 2800 UniGene sequences, 398 displayed significant homology (BlastX E values ≤ 10-10) to genes previously reported to be involved in cold stress related processes. 107 novel oat transcription factors were also identified, out of which 51 were similar to genes previously shown to be cold induced. The CBF transcription factors have a major role in regulating cold acclimation. Four oat CBF sequences were found, belonging to the monocot cluster of DREB family ERF/AP2 domain proteins. Finally in the total EST sequence data (5.3 Mbp) approximately 400 potential SSRs were found, a frequency similar to what has previously been identified in Arabidopsis ESTs. Conclusion The AsCIUniGene set will now be used to fabricate an oat biochip, to perform various expression studies with different oat cultivars incubated at varying temperatures, to generate molecular markers and provide tools for various genetic

  6. Evidence of active NADP(+) phosphatase in dormant seeds of Avena sativa L.

    Science.gov (United States)

    Gallais, S; de Crescenzo, M A; Laval-Martin, D L

    2000-08-01

    Freshly-harvested seeds of Avena sativa L. do not germinate when imbibed at temperatures higher than 25 degrees C. This high temperature dormancy is due to the seed coats, and to the low activities of glycolysis and the oxidative pentose phosphate pathway (OPP) in the embryo. The analysis by exclusion chromatography of soluble NADP(+) phosphatase activities of embryos revealed two isoforms: a 37 kDa isoform present in both dormant and after-ripened caryopses, and a second isoform, with an apparent molecular weight of 160 kDa, five times more active in embryos of dormant seeds than in the after-ripened ones, after 6 h of imbibition at 30 degrees C. Moreover, the activity of this 160 kDa isoform was three times less in embryos from dormant caryopses when they were grown at 10 degrees C, a permissive temperature for radicle protrusion. These results suggest a correlation between the activity of the 160 kDa NADP(+) phosphatase and the dormancy state of the caryopsis. The two isoforms differed in the pH required for optimal activity: pH 5.7 and 6.5 for the 37 kDa and the 160 kDa phosphatases, respectively. Furthermore, the 160 kDa NADP(+) phosphatase displayed a strong specificity for NADP(+), whereas the 37 kDa isoform was able to hydrolyse numerous other phosphorylated compounds.

  7. Environmental and economic aspects of Triticum aestivum L. and Avena sativa growing

    Directory of Open Access Journals (Sweden)

    Jelínková Zuzana

    2016-01-01

    Full Text Available This paper deals with the assessment of cultivation of bread wheat (Triticum aestivum L. and oat (Avena sativa grown in Central Europe within the conventional and organic farming systems in terms of greenhouse gas emissions and economic profitability. Organic farming may be one of the tools for mitigation of greenhouse gas emissions from agricultural production. In the context of crop production, cereals rank among the most commonly grown crops and therefore bread wheat and oat were chosen. The Climate change impact category was assessed within the simplified LCA method and the production of greenhouse gas emissions expressed in CO2e per the production unit was calculated. Economic balance of the cultivation of monitored cereals was compiled based on the yields, farm gate prices and costs. On its basis, the cultivation of wheat within the organic farming system appears to be the most profitable. From an environmental point of view, the emission load of the organic farming system is reduced by 8.04 % within the wheat production and by 15.46 % within the oat cultivation. Therefore, the organic farming system in the Czech Republic appears to be more environmentally friendly and economically efficient within the cereals production.

  8. Competency for graviresponse in the leaf-sheath pulvinus of Avena sativa: onset to loss

    Science.gov (United States)

    Brock, T. G.; Kaufman, P. B.

    1988-01-01

    The development of the leaf-sheath pulvinus of oat (Avena sativa L. cv. Victory) was studied in terms of its competency to respond to gravistimulation. Stages of onset of competency, maximum competency and loss of competency were identified, using the length of the supertending internode as a developmental marker. During the early phases in the onset of competency, the latency period between stimulus and graviresponse decreased and the steady state response rate increased significantly. When fully competent, the latency period remained constant as the plant continued to develop, suggesting that the latency period is relatively insensitive to quantitative changes (e.g., in carbohydrate or nutrient availability) at the cell level within the plant. In contrast, the response rate was found to increase with plant development, indicating that graviresponse rate is more strongly influenced by quantitative cellular changes. The total possible graviresponse of a single oat pulvinus was confirmed to be significantly less than the original presentation angle. This was shown to not result from a loss of competency, since the graviresponse could be reinitiated by increasing the presentation angle. As a result of the low overall graviresponse of individual pulvini, two or more pulvini are required to bring the plant apex to the vertical. This was determined to occur though the sequential, rather than simultaneous, action of successive pulvini, since a given pulvinus lost competency to gravirespond shortly after the next pulvinus became fully competent.

  9. Key Phytochemicals Contributing to the Bitter Off-Taste of Oat (Avena sativa L.).

    Science.gov (United States)

    Günther-Jordanland, Kirsten; Dawid, Corinna; Dietz, Maximilian; Hofmann, Thomas

    2016-12-28

    Sensory-directed fractionation of extracts prepared from oat flour (Avena sativa L.) followed by LC-TOF-MS, LC-MS/MS, and 1D/2D-NMR experiments revealed avenanthramides and saponins as the key phytochemicals contributing to the typical astringent and bitter off-taste of oat. Besides avenacosides A and B, two previously unreported bitter-tasting bidesmosidic saponins were identified, namely, 3-(O-α-l-rhamnopyranosyl(1→2)-[β-d-glucopyranosyl(1→3)-β-d-glucopyranosyl(1→4)]-β-d-glucopyranosid)-26-O-β-d-glucopyranosyl-(25R)-furost-5-ene-3β,22,26-triol, and 3-(O-α-l-rhamnopyranosyl(1→2)-[β-d-glucopyranosyl(1→4)]-β-d-glucopyranosid)-26-O-β-d-glucopyranosyl-(25R)-furost-5-ene-3β,22,26-triol. Depending on the chemical structure of the saponins and avenanthramides, sensory studies revealed human orosensory recognition thresholds of these phytochemicals to range between 3 and 170 μmol/L.

  10. Colloidal Oatmeal (Avena Sativa) Improves Skin Barrier Through Multi-Therapy Activity.

    Science.gov (United States)

    Ilnytska, Olha; Kaur, Simarna; Chon, Suhyoun; Reynertson, Kurt A; Nebus, Judith; Garay, Michelle; Mahmood, Khalid; Southall, Michael D

    2016-06-01

    Oats (Avena sativa) are a centuries-old topical treatment for a variety of skin barrier conditions, including dry skin, skin rashes, and eczema; however, few studies have investigated the actual mechanism of action for the skin barrier strengthening activity of colloidal oatmeal. Four extracts of colloidal oatmeal were prepared with various solvents and tested in vitro for skin barrier related gene expression and activity. Extracts of colloidal oatmeal were found to induce the expression of genes related to epidermal differentiation, tight junctions and lipid regulation in skin, and provide pH-buffering capacity. Colloidal oatmeal boosted the expression of multiple target genes related to skin barrier, and resulted in recovery of barrier damage in an in vitro model of atopic dermatitis. In addition, an investigator-blinded study was performed with 50 healthy female subjects who exhibited bilateral moderate to severe dry skin on their lower legs. Subjects were treated with a colloidal oatmeal skin protectant lotion. Clinically, the colloidal oatmeal lotion showed significant clinical improvements in skin dryness, moisturization, and barrier. Taken together, these results demonstrate that colloidal oatmeal can provide clinically effective benefits for dry and compromised skin by strengthening skin barrier. J Drugs Dermatol. 2016;15(6):684-690.

  11. Size controlled gold nanoparticle formation by Avena sativa biomass: use of plants in nanobiotechnology

    Energy Technology Data Exchange (ETDEWEB)

    Armendariz, Veronica; Herrera, Isaac; Peralta-videa, Jose R. [University of Texas at El Paso, Department of Chemistry (United States); Jose-yacaman, Miguel; Troiani, Horacio [University of Texas at Austin, CNM, Texas Material Institute and Chemical Engineering Department (United States); Santiago, Patricia [Instituto de Fisica, UNAM (Mexico); Gardea-Torresdey, Jorge L. [University of Texas at El Paso, Department of Chemistry (United States)

    2004-08-15

    Oat (Avena sativa) biomass was studied as an alternative to recover Au(III) ions from aqueous solutions and for its capacity to reduce Au(III) to Au(0) forming Au nanoparticles. To study the binding trend of Au(III) to oat and the possible formation of Au nanoparticles, the biomass and a solution of Au(III) were reacted for a period of 1 h at pH values ranging from 2 to 6. The results demonstrated that Au(III) ions were bound to oat biomass in a pH-dependent manner, with the highest adsorption (about 80%) at pH 3. HRTEM studies showed that oat biomass reacted with Au(III) ions formed Au nanoparticles of fcc tetrahedral, decahedral, hexagonal, icosahedral multitwinned, irregular, and rod shape. To our knowledge, this is the second report about the production of nanorods as a product of the reaction of a Au(III) solution with a biological material. These studies also showed that the pH of the reaction influenced the nanoparticle size. The smaller nanoparticles and the higher occurrence of these were observed at pH values of 3 and 4, whereas the larger nanoparticles were observed at pH 2.

  12. Ingested oat herb extract (Avena sativa) changes EEG spectral frequencies in healthy subjects.

    Science.gov (United States)

    Dimpfel, Wilfried; Storni, Charlotte; Verbruggen, Marian

    2011-05-01

    This study aimed at using quantitative assessment of human electric brain activity during mental work for determining acute effects of ingested oat herb extract on cognitive performance. Within a double-blind, randomized, placebo-controlled crossover study, two dosages of a special oat preparation of Avena sativa herba (1250 or 2500 mg of Neuravena®) were compared to placebo. An electroencephalogram was recorded while the patient had eyes open for 6 minutes, eyes closed for 4 minutes, performance of a concentration test (d2) for 5 minutes, and performance of mental arithmetic (KLT) for 5 minutes. Source density was calculated and spectral frequency changes were averaged to give one value for each frequency range. Using quantitative brain mapping technology (CATEEM®), main effects were observed in the left frontotemporal area, known to be involved in cognitive tasks. Statistically significant differences were observed during resting (lowering of spectral δ power) and during performance of the d2-concentration test (enhancement of spectral θ power) (p < 0.01 and p < 0.05, respectively). Also, during performance of mental arithmetic, greater enhancement of θ power was observed but only at a lower error probability (p = 0.115). No effects could be seen using the P300 paradigm during presentation of a visual stimulus. These changes suggest that oat herb extract might be effective in healthy subjects, resulting in a positive impact on cognitive performance.

  13. Size controlled gold nanoparticle formation by Avena sativa biomass: use of plants in nanobiotechnology

    Science.gov (United States)

    Armendariz, Veronica; Herrera, Isaac; peralta-videa, Jose R.; Jose-yacaman, Miguel; Troiani, Horacio; Santiago, Patricia; Gardea-Torresdey, Jorge L.

    2004-08-01

    Oat ( Avena sativa) biomass was studied as an alternative to recover Au(III) ions from aqueous solutions and for its capacity to reduce Au(III) to Au(0) forming Au nanoparticles. To study the binding trend of Au(III) to oat and the possible formation of Au nanoparticles, the biomass and a solution of Au(III) were reacted for a period of 1 h at pH values ranging from 2 to 6. The results demonstrated that Au(III) ions were bound to oat biomass in a pH-dependent manner, with the highest adsorption (about 80%) at pH 3. HRTEM studies showed that oat biomass reacted with Au(III) ions formed Au nanoparticles of fcc tetrahedral, decahedral, hexagonal, icosahedral multitwinned, irregular, and rod shape. To our knowledge, this is the second report about the production of nanorods as a product of the reaction of a Au(III) solution with a biological material. These studies also showed that the pH of the reaction influenced the nanoparticle size. The smaller nanoparticles and the higher occurrence of these were observed at pH values of 3 and 4, whereas the larger nanoparticles were observed at pH 2.

  14. Carbon partitioning between oil and carbohydrates in developing oat (Avena sativa L.) seeds

    Science.gov (United States)

    Ekman, Åsa; Hayden, Daniel M.; Dehesh, Katayoon; Bülow, Leif; Stymne, Sten

    2008-01-01

    Cereals accumulate starch in the endosperm as their major energy reserve in the grain. In most cereals the embryo, scutellum, and aleurone layer are high in oil, but these tissues constitute a very small part of the total seed weight. However, in oat (Avena sativa L.) most of the oil in kernels is deposited in the same endosperm cells that accumulate starch. Thus oat endosperm is a desirable model system to study the metabolic switches responsible for carbon partitioning between oil and starch synthesis. A prerequisite for such investigations is the development of an experimental system for oat that allows for metabolic flux analysis using stable and radioactive isotope labelling. An in vitro liquid culture system, developed for detached oat panicles and optimized to mimic kernel composition during different developmental stages in planta, is presented here. This system was subsequently used in analyses of carbon partitioning between lipids and carbohydrates by the administration of 14C-labelled sucrose to two cultivars having different amounts of kernel oil. The data presented in this study clearly show that a higher amount of oil in the high-oil cultivar compared with the medium-oil cultivar was due to a higher proportion of carbon partitioning into oil during seed filling, predominantly at the earlier stages of kernel development. PMID:19036843

  15. Carbon partitioning between oil and carbohydrates in developing oat (Avena sativa L.) seeds.

    Science.gov (United States)

    Ekman, Asa; Hayden, Daniel M; Dehesh, Katayoon; Bülow, Leif; Stymne, Sten

    2008-01-01

    Cereals accumulate starch in the endosperm as their major energy reserve in the grain. In most cereals the embryo, scutellum, and aleurone layer are high in oil, but these tissues constitute a very small part of the total seed weight. However, in oat (Avena sativa L.) most of the oil in kernels is deposited in the same endosperm cells that accumulate starch. Thus oat endosperm is a desirable model system to study the metabolic switches responsible for carbon partitioning between oil and starch synthesis. A prerequisite for such investigations is the development of an experimental system for oat that allows for metabolic flux analysis using stable and radioactive isotope labelling. An in vitro liquid culture system, developed for detached oat panicles and optimized to mimic kernel composition during different developmental stages in planta, is presented here. This system was subsequently used in analyses of carbon partitioning between lipids and carbohydrates by the administration of 14C-labelled sucrose to two cultivars having different amounts of kernel oil. The data presented in this study clearly show that a higher amount of oil in the high-oil cultivar compared with the medium-oil cultivar was due to a higher proportion of carbon partitioning into oil during seed filling, predominantly at the earlier stages of kernel development.

  16. Solar Ultraviolet-B Radiation Increases Phenolic Content and Ferric Reducing Antioxidant Power in Avena sativa

    Directory of Open Access Journals (Sweden)

    Matthew A. Krna

    2007-06-01

    Full Text Available We examined the influence of solar ultraviolet-B radiation (UV-B; 280-320 nm on the maximum photochemical efficiency of photosystem II (Fv/Fm, bulk-soluble phenolic concentrations, ferric-reducing antioxidant power (FRAP and growth of Avena sativa. Treatments involved placing filters on frames over potted plants that reduced levels of biologically effective UV-B by either 71% (reduced UV-B or by 19% (near-ambient UV-B over the 52 day experiment (04 July - 25 August 2002. Plants growing under near-ambient UV-B had 38% less total biomass than those under reduced UV-B. The reduction in biomass was mainly the result of a 24% lower leaf elongation rate, resulting in shorter leaves and less total leaf area than plants under reduced UV-B. In addition, plants growing under near-ambient UV-B had up to 17% lower Fv/Fm values early in the experiment, and this effect declined with plant age. Concentrations of bulk-soluble phenolics and FRAP values were 17 and 24% higher under near-ambient UV-B than under reduced UV-B, respectively. There was a positive relationship between bulk-soluble phenolic concentrations and FRAP values. There were no UV-B effects on concentrations of carotenoids (carotenes + xanthophylls.

  17. Altered growth response to exogenous auxin and gibberellic acid by gravistimulation in pulvini of Avena sativa

    Science.gov (United States)

    Brock, T. G.; Kaufman, P. B.

    1988-01-01

    Pulvini of excised segments from oats (Avena sativa L. cv Victory) were treated unilaterally with indoleacetic acid (IAA) or gibberellic acid (GA3) with or without gravistimulation to assess the effect of gravistimulation on hormone action. Optimum pulvinus elongation growth (millimeters) and segment curvature (degrees) over 24 hours were produced by 100 micromolar IAA in vertical segments. The curvature response to IAA at levels greater than 100 micromolar, applied to the lower sides of gravistimulated (90 degrees) pulvini, was significantly less than the response to identical levels in vertical segments. Furthermore, the bending response of pulvini to 100 micromolar IAA did not vary significantly over a range of presentation angles between 0 and 90 degrees. In contrast, the response to IAA at levels less than 10 micromolar, with gravistimulation, was approximately the sum of the responses to gravistimulation alone and to IAA without gravistimulation. This was observed over a range of presentation angles. Also, GA3 (0.3-30 micromolar) applied to the lower sides of horizontal segments significantly enhanced pulvinus growth and segment curvature, although exogenous GA3 over a range of concentrations had no effect on pulvinus elongation growth or segment curvature in vertical segments. The response to GA3 (10 micromolar) plus IAA (1.0 or 100 micromolar) was additive for either vertical or horizontal segments. These results indicate that gravistimulation produces changes in pulvinus responsiveness to both IAA and GA3 and that the changes are unique for each growth regulator. It is suggested that the changes in responsiveness may result from processes at the cellular level other than changes in hormonal sensitivity.

  18. Resistance to uprooting of Alfalfa and Avena Sativa and related importance for flume experiments

    Science.gov (United States)

    Edmaier, K.; Crouzy, B.; Burlando, P.; Perona, P.

    2012-04-01

    Vegetation influences sediment dynamics by stabilizing the alluvial sediment with its root system. Thus, vegetation engineers the riparian ecosystem by contributing to the formation and stabilization of river bars and islands. The resistance to uprooting of young plants in non-cohesive sediment depends on the competition between flow induced drag and root growth timescales. The investigation of flow-sediment-plant interactions in situ is difficult since variables cannot be controlled and material hardly be collected. In order to investigate ecomorphological processes, laboratory experiments are essential and have gained importance in the last decade. To achieve a better understanding of the dependence of resistance to uprooting on the root system (length and structure) we conducted vertical uprooting experiments with Alfalfa and Avena Sativa which are both species that have been used in flume experiments on vegetation-flow interactions (e.g. Tal and Paola, 2010; Perona et al., in press). Seeds were seeded on quartz sand and vertically uprooted with constant velocity whereat the weight force required to uproot a seedling was measured. After uprooting, roots were scanned and analyzed and the correlation of root parameters with the uprooting work was studied. Total root length was found to be the best explanatory variable, in particular the uprooting work increases following a power law with increasing root length. The impact of other root parameters (main root length, root number, tortuosity) on the uprooting work was as well analyzed. Still, not all influencing root parameters could be captured, like the angle between roots or root hair distribution. Environmental conditions like grain size and saturation were also found to have an effect on the uprooting resistance of roots. So, lower saturated sediment results in a higher uprooting work. This work is a first step to better understand the energy regime for vegetation uprooting and its dependence on various

  19. Caracterização química de cultivares de aveia (Avena sativa l

    Directory of Open Access Journals (Sweden)

    I. Pedó

    1997-08-01

    Full Text Available O presente trabalho teve por objetivo caracterizar quimicamente quatro cultivares de aveia (Avena sativa, L.: UPF-15, UPF-16, CTC-03 e UFRGS-14, recentemente selecionados pelo programa de melhoramento genético de aveia no sul do Brasil. A caracterização química foi realizada através das seguintes determinações: composição centesimal, composição mineral, composição em aminoácidos e em ácidos graxos. Os quatro cultivares estudados apresentaram altos teores de proteína (13,95 a 16,52% e lipídios (6,33 a 7,50%. Os teores médios de fibra alimentar solúvel e insolúvel também foram relativamente altos nestes cultivares, 4,76 e 6,36% e, conseqüentemente, o teor de amido foi relativamente baixo (53,26% em média. A composição em aminoácidos foi adequada e semelhante ao padrão teórico da FAO, sendo a lisina o primeiro aminoácido limitante, seguido da treonina. Os cultivares apresentaram altas concentrações de ácidos graxos insaturados, sendo que o linoléico, oléico e palmítico representaram 96% do total. Embora não tenham sido observadas grandes diferenças entre os cultivares estudados, observa-se que o UFRGS-14 se destaca principalmente pelo teor mais elevado de proteína.

  20. Multifunctionalised benzoxazinones in the systems Oryza sativa-Echinochloa crus-galli and Triticum aestivum-Avena fatua as natural-product-based herbicide leads.

    Science.gov (United States)

    Macías, Francisco A; Chinchilla, Nuria; Arroyo, Elena; Varela, Rosa M; Molinillo, José M G; Marín, David

    2010-10-01

    Fifteen novel derivatives of D-DIBOA, including aromatic ring modifications and the addition of side chains in positions C-2 and N-4, had previously been synthesised and their phytotoxicity on standard target species (STS) evaluated. This strategy combined steric, electronic, solubility and lipophilicity requirements to achieve the maximum phytotoxic activity. An evaluation of the bioactivity of these compounds on the systems Oryza sativa-Echinochloa crus-galli and Triticum aestivum-Avena fatua is reported here. All compounds showed inhibition profiles on the two species Echinochloa crus-galli (L.) Beauv. and Avena fatua L. The most marked effects were caused by 6F-4Pr-D-DIBOA, 6F-4Val-D-DIBOA, 6Cl-4Pr-D-DIBOA and 6Cl-4Val-D-DIBOA. The IC(50) values for the systems Echinochloa crus-galli-Oryza sativa and Avena fatua-Triticum aestivum for all compounds were compared. The compound that showed the greatest selectivity for the system Echinochloa crus-galli-Oryza sativa was 8Cl-4Pr-D-DIBOA, which was 15 times more selective than the commercial herbicide propanil (Cotanil-35). With regard to the system Avena fatua-Triticum aestivum, the compounds that showed the highest selectivities were 8Cl-4Val-D-DIBOA and 6F-4Pr-D-DIBOA. The results obtained for 6F-4Pr-D-DIBOA are of great interest because of the high phytotoxicity to Avena fatua (IC(50) = 6 µM, r(2) = 0.9616). The in vitro phytotoxicity profiles and selectivities shown by the compounds described here make them candidates for higher-level studies. 8Cl-4Pr-D-DIBOA for the system Echinochloa crus-galli-Oryza sativa and 6F-4Pr-D-DIBOA for Avena fatua-Triticum aestivum were the most interesting compounds.

  1. Oat (Avena sativa) seed extract as an antifungal food preservative through the catalytic activity of a highly abundant class I chitinase

    DEFF Research Database (Denmark)

    Sørensen, Hans Peter; Madsen, Lone Søvad; Petersen, Jørgen

    2010-01-01

    Extracts from different higher plants were screened for the ability to inhibit the growth of Penicillium roqueforti, a major contaminating species in industrial food processing. Oat (Avena sativa) seed extracts exhibited a high degree of antifungal activity and could be used directly on rye bread...

  2. Molecular mapping of powdery mildew resistance gene Eg-3 in cultivated oat (Avena sativa L. cv. Rollo).

    Science.gov (United States)

    Mohler, Volker; Zeller, Friedrich J; Hsam, Sai L K

    2012-05-01

    Powdery mildew is a prevalent fungal disease affecting oat (Avena sativa L.) production in Europe. Common oat cultivar Rollo was previously shown to carry the powdery mildew resistance gene Eg-3 in common with cultivar Mostyn. The resistance gene was mapped with restriction fragment length polymorphism (RFLP) markers from Triticeae group-1 chromosomes using a population of F(3) lines from a cross between A. byzantina cv. Kanota and A. sativa cv. Rollo. This comparative mapping approach positioned Eg-3 between cDNA-RFLP marker loci cmwg706 and cmwg733. Since both marker loci were derived from the long arm of barley chromosome 1H, the subchromosomal location of Eg-3 was assumed to be on the long arm of oat chromosome 17. Amplified fragment length polymorphism (AFLP) marker technology featured as an efficient means for obtaining markers closely linked to Eg-3.

  3. COMPARITIVE GENETIC DIVERSITY ANALYSIS OF OAT (Avena ...

    African Journals Online (AJOL)

    knsccf

    ... diversity, inter-simple sequence repeats (ISSR), morphology, oat, relationship. INTRODUCTION. Oat (Avena sativa L.) is one of the most important forage and feed crops of the world. Oat is used as green fodder, straw, hay or silage. Oat grain makes a good balanced concentrate in the rations for poultry, cattle, sheep and.

  4. Studies on biological effects of gamma irradiation on oat (Avena sativa L.)

    International Nuclear Information System (INIS)

    Hussain Basha, M.; Mehta, A.K.; Gour, V.K.

    2014-01-01

    The seeds of three oat varieties viz., Kent, JO 03-91 and JO-1 were exposed to different doses of gamma rays i.e. 200 Gy, 250 Gy, 300 Gy, 350 Gy, 400 Gy, 450 Gy and 500 Gy at Nuclear Research Laboratory, IARI, New Delhi. The present investigation aims to study biological effects of gamma irradiation on oat (Avena sativa L.) in the M 1 generation. After irradiation, 10 seeds were sown from each dose on paper towel by using distilled water. Germination, root and shoot length were recorded after seven days. 100 seeds of each irradiated dose along with control were sown in the field at Regional station, IARI, Wellington, Tamil Nadu. Seedling emergence and height under field conditions was recorded after 7 and 14 days. An observation for plant height and plant survival percentage was reordered at maturity stage. Seed germination (%), root length and shoot length decreased not in a linear fashion with the increase in irradiation doses. In contrast, the gamma rays had some stimulatory effects on shoot length in comparison to root length. Seedling emergence, plant height and plant survival (%) decreased with increase in radiation dose not in a linear fashion in all three varieties. Seedling emergence was recorded less in 7 DAS in comparison to 14 DAS in all three varieties. The coefficient of correlation between radiation dose and emergence and plant survival under field conditions were found to be significant and negative in all three varieties. Radiation dose of 500 Gy proved most lethal and reduced the percentage of survived plants in oat varieties JO-1 (37.36%) and JO 03-91 (43.57%) followed by 450 Gy in JO 03-91 (54.07 %) and 400 Gy in all three varieties (<68.5%). Only in the variety JO 03-91 has three morphological mutations were found at different doses i.e. 250 Gy, 350 Gy and 450 Gy and two chlorophyll mutations namely i.e. chlorina and yellow viridis was found in JO-1 (450 Gy) and Kent (250 Gy) in M 1 generation respectively. (author)

  5. Interacción genotipo-ambiente en avena sativa l: utilizando los modelos AMMI y factorial de correspondencias Genotype-environment interaction in avena sativa l: employing AMMI and factorial correspondence models

    Directory of Open Access Journals (Sweden)

    Horacio Abel Acciaresi

    1999-10-01

    Full Text Available El objetivo fue (i determinar la presencia de interacción genotipo-ambiente (IGA en la producción forrajera de avena (Avena sativa L. de genotipos tolerantes y no tolerantes a Schizaphis graminum empleando un número bajo de ambientes en la provincia de Buenos Aires (Argentina mediante los modelos de efectos principales aditivos e interacción multiplicativa (AMMI y análisis factorial de correspondencias (AFC y (ii comparar los resultados obtenidos por ambos métodos. Los ensayos se condujeron en La Dulce (Argentina y La Plata (Argentina (1993, 1994 y 1995. Se evaluaron 12 genotipos (comerciales y líneas avanzadas en 12 ambientes (combinación de localidad, años y cortes. Los factores ambiente, genotipo e interacción explicaron un 41,15% (pThe objective of this study was (i to determine the presence of genotype-environment interaction (GXE in Avena sativa l. for above dry matter yield of Schizaphis graminun tolerant and non-tolerant genotypes according to two different models: additive main effects and multiplicative interaction (AMMI and factorial correspondence analysis; and (ii to study and compare the results obtained with these models. Twelve genotypes and 12 environments were conducted at La Dulce and La Plata (Argentina during three years (1993, 1994 and 1995. The environment (E, genotype (G and GxE factors explained a 41.15%, 7.88% and 36.36% of the total sum of square, respectively. The first three axes of principal component analysis of AMMI were highly significant (p<0.001, explaining a 57.99%, 29.03% and 6.27% of interaction sum of square. The first three factorial correspondence coordinates accounted for 58.98%, 29.58% and 5.60% of the interaction sum of square. The relationships between tolerant genotypes-first clipping environments and non-tolerant genotypes-second clipping environments were reflected in the biplots of both models. The simultaneous use of AMMI and factorial correspondence analysis appeared as a useful

  6. CONTENIDO Y TRASLOCACIÓN DE PLOMO EN AVENA (Avena sativa, L. Y HABA (Vicia faba, L. DE UN SUELO CONTAMINADO

    Directory of Open Access Journals (Sweden)

    Elizabeth García-Gallegos

    2011-01-01

    Full Text Available Un experimento en invernadero se estableció para determinar la concentración de plomo (Pb en suelo, raíz y parte aérea de haba y avena; se calculó el factor de bioconcentración y traslocación en las dos especies. Se probaron 50, 100 y 150 mg·Pb·kg-1 de suelo, incluyendo un control. Las plantas se colectaron a los 60 días después de la siembra y se midieron altura de planta (AP, volumen radical (VR y biomasa seca total (BST, además del contenido de Pb en suelo, raíz y parte aérea. La cuantificación de Pb se realizó por espectrofotometría de absorción atómica. El suelo cultivado con haba presentó un 28.48 % de PbEDTA. Las variables AP, VR y BST no fueron afectadas de manera drástica por las concentraciones de Pb probadas. Las plantas de haba y avena absorbieron un total de 55 mg·kg-1 y 45.3 mg·kg-1, respectivamente, las cuales se consideran tóxicas para plantas cultivadas. Los resultados pueden servir de base para ampliar el conocimiento del contenido de Pb absorbido y traslocado en plantas de haba y avena, ya que la capacidad de tolerar y absorber Pb es específica de la especie, inclusive de la variedad de planta.

  7. Substrate specificity screening of oat (Avena sativa) seeds aminopeptidase demonstrate unusually broad tolerance in S1 pocket.

    Science.gov (United States)

    Gajda, Anna D; Pawełczak, Małgorzata; Drag, Marcin

    2012-05-01

    Aminopeptidases are proteolytic enzymes that remove one amino acid at a time from N-terminus of peptidic substrates. In plants, inhibitors of aminopeptidases can find potential applications in agriculture as herbicides. In this report we have used a library of fluorogenic derivatives of natural and unnatural amino acids for substrate specificity profiling of oat (Avena sativa) aminopeptidase. Interestingly, we have found that this enzyme recognizes effectively among the natural amino acids basic residues like Arg and Lys, hydrophobic Phe, Leu and Met, but also to some extent acidic residues Asp and Glu. In the case of unnatural amino acids hydrophobic residues (hPhe and hCha) and basic hArg were preferentially recognized. Copyright © 2012 Elsevier Masson SAS. All rights reserved.

  8. Primary photophysics of the FMN binding LOV2 domain of the plant blue light receptor phototropin of Avena sativa

    Science.gov (United States)

    Schüttrigkeit, Tanja A.; Kompa, Christian K.; Salomon, Michael; Rüdiger, Wolfhart; Michel-Beyerle, Maria E.

    2003-11-01

    The temporal evolution of the initially excited singlet state of flavine mononucleotide, which is the cofactor in the LOV2 domain of the blue photoreceptor phototropin, has been studied in picosecond time-resolved fluorescence and femtosecond time-resolved absorption experiments. In the LOV2-WT protein of Avena sativa singlet-triplet intersystem crossing proceeding within 2.3 ns is the primary process which increases the triplet yield by a factor of 1.23 as compared to a mutant where cysteine 39 is replaced by alanine. This flavin triplet state is responsible for the formation of a cysteinyl-flavin adduct which triggers the unique photocycle of the LOV2 domain and thus the sensoric function of the blue light receptor phototropin.

  9. Growth response of Avena sativa in amino-acids-rich soils converted from phenol-contaminated soils by Corynebacterium glutamicum.

    Science.gov (United States)

    Lee, Soo Youn; Kim, Bit-Na; Choi, Yong Woo; Yoo, Kye Sang; Kim, Yang-Hoon; Min, Jiho

    2012-04-01

    The biodegradation of phenol in laboratory-contaminated soil was investigated using the Gram-positive soil bacterium Corynebacterium glutamicum. This study showed that the phenol degradation caused by C. glutamicum was greatly enhanced by the addition of 1% yeast extract. From the toxicity test using Daphnia magna, the soil did not exhibit any hazardous effects after the phenol was removed using C. glutamicum. Additionally, the treatment of the phenolcontaminated soils with C. glutamicum increased various soil amino acid compositions, such as glycine, threonine, isoleucine, alanine, valine, leucine, tyrosine, and phenylalanine. This phenomenon induced an increase in the seed germination rate and the root elongation of Avena sativa (oat). This probably reflects that increased soil amino acid composition due to C. glutamicum treatment strengthens the plant roots. Therefore, the phenol-contaminated soil was effectively converted through increased soil amino acid composition, and additionally, the phenol in the soil environment was biodegraded by C. glutamicum.

  10. Efecto fitotóxico de Baccharis ulicina sobre la germinación y crecimiento inicial de Avena sativa, Lolium perenne y Raphanus sativus

    OpenAIRE

    Tucat, Guillermo; Bentivegna, Diego; Fernández, Osvaldo; Busso, Carlos; Brevedan, Roberto; Mujica, María de la Merced; Torres, Yanina; Daddario, Juan; Ithurrart, Leticia; Giorgetti, Hugo; Rodríguez, Gustavo; Montenegro, Oscar; Baioni, Sandra; Entío, José; Fioretti, María Nélida

    2013-01-01

    Baccharis ulicina es una maleza ampliamente distribuida en los pastizales de la zona semiárida argentina. A fin de evaluar sus posibles efectos alelopáticos, se utilizaron extractos acuosos de B. ulicina (hoja, tallo, raíz y planta entera) a dos concentraciones (50 y 150 g tejido/L agua) sobre la germinación y crecimiento inicial de Avena sativa, Lolium perenne y Raphanus sativus. Para cada especie se regaron 100 ...

  11. DISPONIBILIDAD DE NITRÓGENO Y DESARROLLO DE AVENA FORRAJERA (Avena sativa L. CON APLICACIÓN DE BIOSÓLIDOS

    Directory of Open Access Journals (Sweden)

    Edgar Flores Félix

    2014-04-01

    Full Text Available Se estableció un experimento para evaluar dosis crecientes de fertilizante sintético y biosólidos líquidos digeridos aeróbicamente en un cultivo de avena forrajera, para 1 evaluar la respuesta agronómica de la avena forrajera a la aplicación de nitrógeno (N como sulfato de amonio y biosólidos, y 2 estimar la disponibilidad de N en los biosólidos en el ciclo de cultivo, mediante el método de equivalencia de fertilizante (EF. Los tratamientos fueron diseñados para aportar 0, 67, 100 y 133% del requerimiento de N del cultivo (RNC de avena forrajera con ambas fuentes de N. El 100% del RNC fue de 144 kg ha-1, al cual se restó el N residual del suelo y el N del agua de riego, por lo que la dosis de fertilizante para cubrir el 100% del RNC fue de 95 kg ha-1. La altura de planta se incrementó hasta en un 53% con ambas fuentes de N, con respecto al testigo sin fertilizar. El rendimiento de materia seca (MS obtenido en las parcelas con biosólidos fue significativamente mayor que con fertilizante sintético. Con ambas fuentes de N, el rendimiento de MS se ajustó a una ecuación de regresión lineal, en función de la dosis de N. De acuerdo con el método de EF, las dosis de 160.9 kg ha-1 de N total con biosólidos (DNbios y 37.5 kg ha-1 de N inorgánico con fertilizante (DNfert, tuvieron 103.2 kg ha 1 de N extraído por el cultivo (Next. La disponibilidad de N del biosólido (NDbios se calculó como la proporción de la DNfert con respecto a la DNbios para un mismo valor de Next, expresado en porcentaje; en el presente estudio, el NDbios fue de 23.3%. La estimación del N disponible es importante para estimar dosis de aplicación de biosólidos con base en el requerimiento de N de los cultivos, evitando así aplicaciones excesivas y riesgos de contaminación.

  12. Genome-wide association study for crown rust (Puccinia coronata f. sp. avenae) and powdery mildew (Blumeria graminis f. sp. avenae) resistance in an oat (Avena sativa) collection of commercial varieties and landraces.

    Science.gov (United States)

    Montilla-Bascón, Gracia; Rispail, Nicolas; Sánchez-Martín, Javier; Rubiales, Diego; Mur, Luis A J; Langdon, Tim; Howarth, Catherine J; Prats, Elena

    2015-01-01

    Diseases caused by crown rust (Puccinia coronata f. sp. avenae) and powdery mildew (Blumeria graminis f. sp. avenae) are among the most important constraints for the oat crop. Breeding for resistance is one of the most effective, economical, and environmentally friendly means to control these diseases. The purpose of this work was to identify elite alleles for rust and powdery mildew resistance in oat by association mapping to aid selection of resistant plants. To this aim, 177 oat accessions including white and red oat cultivars and landraces were evaluated for disease resistance and further genotyped with 31 simple sequence repeat and 15,000 Diversity Arrays Technology (DArT) markers to reveal association with disease resistance traits. After data curation, 1712 polymorphic markers were considered for association analysis. Principal component analysis and a Bayesian clustering approach were applied to infer population structure. Five different general and mixed linear models accounting for population structure and/or kinship corrections and two different statistical tests were carried out to reduce false positive. Five markers, two of them highly significant in all models tested were associated with rust resistance. No strong association between any marker and powdery mildew resistance at the seedling stage was identified. However, one DArT sequence, oPt-5014, was strongly associated with powdery mildew resistance in adult plants. Overall, the markers showing the strongest association in this study provide ideal candidates for further studies and future inclusion in strategies of marker-assisted selection.

  13. Genome-wide association study for crown rust (Puccinia coronata f. sp. avenae and powdery mildew (Blumeria graminis f. sp. avenae resistance in an oat (Avena sativa collection of commercial varieties and landraces

    Directory of Open Access Journals (Sweden)

    Gracia eMontilla-Bascón

    2015-03-01

    Full Text Available Diseases caused by crown rust (Puccinia coronata f. sp. avenae and powdery mildew (Blumeria graminis f. sp. avenae are among the most important constraints for the oat crop. Breeding for resistance is one of the most effective, economical, and environmentally friendly means to control these diseases. The purpose of this work was to identify elite alleles for rust and powdery mildew resistance in oat by association mapping to aid selection of resistant plants. To this aim, 177 oat accessions including white and red oat cultivars and landraces were evaluated for disease resistance and further genotyped with 31 simple sequence repeat (SSR and 15,000 Diversity Arrays Technology (DArT markers to reveal association with disease resistance traits. After data curation, 1712 polymorphic markers were considered for association analysis. Principal component analysis and a Bayesian clustering approach were applied to infer population structure. Five different general and mixed linear models accounting for population structure and/or kinship corrections and two different statistical tests were carried out to reduce false positive. Five markers, two of them highly significant in all models tested were associated with rust resistance. No strong association between any marker and powdery mildew resistance at the seedling stage was identified. However, one DArT sequence, oPt-5014, was strongly associated with powdery mildew resistance in adult plants. Overall, the markers showing the strongest association in this study provide ideal candidates for further studies and future inclusion in strategies of marker assisted selection.

  14. An investigation of konjac glucomannan-keratin hydrogel scaffold loaded with Avena sativa extracts for diabetic wound healing.

    Science.gov (United States)

    Veerasubramanian, Praveen Krishna; Thangavel, Ponrasu; Kannan, Ramya; Chakraborty, Sudip; Ramachandran, Balaji; Suguna, Lonchin; Muthuvijayan, Vignesh

    2018-02-13

    We have developed a novel hydrogel composed of konjac glucomannan (KGM), human hair proteins (KER), and an ethanolic extract of Avena sativa (OAT) and evaluated its potential as a dressing material for diabetic wounds. KGM is an excellent biocompatible gelling agent that stimulates fibroblast proliferation and immunomodulation. Human hair proteins (KER) are biocompatible, biodegradable, and possess abundant cell adhesion sites. KER also promotes fibroblast attachment and proliferation, keratinocyte migration, and collagen expression, which can accelerate wound healing. OAT consists of oat β-glucans and several anti-inflammatory and antioxidant moieties that can reduce prolonged inflammation in chronic wounds. SEM images confirm the highly porous architecture of the scaffolds. When immersed in PBS, KGM + KER + OAT hydrogels absorb 7.5 times their dry weight. These hydrogels display a measured rate of degradation in lysozyme. KGM + KER + OAT hydrogels showed no significant cytotoxicity against NIH/3T3 fibroblasts. DAPI and SEM images obtained after 48 h of cell culture illustrate the attachment and infiltration of fibroblasts. In vivo studies performed using a diabetic rat excision wound model showed that KGM + KER + OAT hydrogels significantly accelerated wound healing compared to the control and the KGM + KER hydrogels. Copyright © 2018 Elsevier B.V. All rights reserved.

  15. Use of High-Resolution Multispectral Imagery to Estimate Chlorophyll and Plant Nitrogen in Oats (Avena sativa)

    Science.gov (United States)

    ELarab, M.; Ticlavilca, A. M.; Torres-Rua, A. F.; Maslova, I.; McKee, M.

    2013-12-01

    Precision agriculture requires high spatial resolution in the application of the inputs to agricultural production. This requires that actionable information about crop and field status be acquired at the same high spatial resolution and at a temporal frequency appropriate for timely responses. In this study, high-resolution imagery was obtained through the use of a small, unmanned aerial vehicle, called AggieAirTM, that provides spatial resolution as fine as 6 cm. Simultaneously with AggieAir flights, intensive ground sampling was conducted at precisely determined locations for plant chlorophyll, plant nitrogen, and other parameters. This study investigated the spectral signature of a crop of oats (Avena sativa) and formulated machine learning regression models of reflectance response between the multi-spectral bands available from AggieAir (red, green, blue, near infrared, and thermal), plant chlorophyll and plant nitrogen. We tested two, separate relevance vector machines (RVM) and a single multivariate relevance vector machine (MVRVM) to develop the linkages between the remotely sensed data and plant chlorophyll and nitrogen at approximately 15-cm resolution. The results of this study are presented, including a statistical evaluation of the performance of the different models and a comparison of the RVM modeling methods against more traditional approaches that have been used for estimation of plant chlorophyll and nitrogen.

  16. The primary photophysics of the Avena sativa phototropin 1 LOV2 domain observed with time-resolved emission spectroscopy.

    Science.gov (United States)

    van Stokkum, Ivo H M; Gauden, Magdalena; Crosson, Sean; van Grondelle, Rienk; Moffat, Keith; Kennis, John T M

    2011-01-01

    The phototropins are blue-light receptors that base their light-dependent action on the reversible formation of a covalent bond between a flavin mononucleotide (FMN) cofactor and a conserved cysteine in light, oxygen or voltage (LOV) domains. The primary reactions of the Avena sativa phototropin 1 LOV2 domain were investigated by means of time-resolved and low-temperature fluorescence spectroscopy. Synchroscan streak camera experiments revealed a fluorescence lifetime of 2.2 ns in LOV2. A weak long-lived component with emission intensity from 600 to 650 nm was assigned to phosphorescence from the reactive FMN triplet state. This observation allowed determination of the LOV2 triplet state energy level at physiological temperature at 16600 cm(-1). FMN dissolved in aqueous solution showed pH-dependent fluorescence lifetimes of 2.7 ns at pH 2 and 3.9-4.1 ns at pH 3-8. Here, too, a weak phosphorescence band was observed. The fluorescence quantum yield of LOV2 increased from 0.13 to 0.41 upon cooling the sample from 293 to 77 K. A pronounced phosphorescence emission around 600 nm was observed in the LOV2 domain between 77 and 120 K in the steady-state emission. © 2011 The Authors. Photochemistry and Photobiology © 2011 The American Society of Photobiology.

  17. Genome-Wide Association Mapping of Barley Yellow Dwarf Virus Tolerance in Spring Oat (Avena sativa L.).

    Science.gov (United States)

    Foresman, Bradley J; Oliver, Rebekah E; Jackson, Eric W; Chao, Shiaoman; Arruda, Marcio P; Kolb, Frederic L

    2016-01-01

    Barley yellow dwarf viruses (BYDVs) are responsible for the disease barley yellow dwarf (BYD) and affect many cereals including oat (Avena sativa L.). Until recently, the molecular marker technology in oat has not allowed for many marker-trait association studies to determine the genetic mechanisms for tolerance. A genome-wide association study (GWAS) was performed on 428 spring oat lines using a recently developed high-density oat single nucleotide polymorphism (SNP) array as well as a SNP-based consensus map. Marker-trait associations were performed using a Q-K mixed model approach to control for population structure and relatedness. Six significant SNP-trait associations representing two QTL were found on chromosomes 3C (Mrg17) and 18D (Mrg04). This is the first report of BYDV tolerance QTL on chromosome 3C (Mrg17) and 18D (Mrg04). Haplotypes using the two QTL were evaluated and distinct classes for tolerance were identified based on the number of favorable alleles. A large number of lines carrying both favorable alleles were observed in the panel.

  18. The primary photophysics of the Avena sativa phototropin 1 LOV2 domain observed with time-resolved emission spectroscopy†

    Science.gov (United States)

    van Stokkum, Ivo H.M.; Gauden, Magdalena; Crosson, Sean; van Grondelle, Rienk; Moffat, Keith; Kennis, John T.M.

    2016-01-01

    The phototropins are blue-light receptors that base their light-dependent action on the reversible formation of a covalent bond between a flavin mononucleotide (FMN) cofactor and a conserved cysteine in light, oxygen or voltage (LOV) domains. The primary reactions of the Avena sativa phototropin 1 LOV2 domain were investigated by means of time-resolved and low-temperature fluorescence spectroscopy. Synchroscan streak camera experiments revealed a fluorescence lifetime of 2.2 ns in LOV2. A weak long-lived component with emission intensity from 600 to 650 nm was assigned to phosphorescence from the reactive FMN triplet state. This observation allowed determination of the LOV2 triplet state energy level at physiological temperature at 16600 cm−1. FMN dissolved in aqueous solution showed pH-dependent fluorescence lifetimes of 2.7 ns at pH 2 and 3.9–4.1 ns at pH 3 to 8. Here, too, a weak phosphorescence band was observed. The fluorescence quantum yield of LOV2 increased from 0.13 to 0.41 upon cooling the sample from 293 to 77 K. A pronounced phosphorescence emission around 600 nm was observed in the LOV2 domain between 77 and 120 K in the steady-state emission. PMID:21261629

  19. Inhibition of Fusarium graminearum growth in flour gel cultures by hexane-soluble compounds from oat (Avena sativa L.) flour.

    Science.gov (United States)

    Doehlert, Douglas C; Rayas-Duarte, Patricia; McMullen, Michael S

    2011-12-01

    Fusarium head blight, incited by the fungus Fusarium graminearum, primarily affects wheat (Triticum aestivum) and barley (Hordeum vulgarum), while oat (Avena sativa) appears to be more resistant. Although this has generally been attributed to the open panicle of oats, we hypothesized that a chemical component of oats might contribute to this resistance. To test this hypothesis, we created culture media made of wheat, barley, and oat flour gels (6 g of flour in 20 ml of water, gelled by autoclaving) and inoculated these with plugs of F. graminearum from actively growing cultures. Fusarium growth was measured from the diameter of the fungal plaque. Plaque diameter was significantly smaller on oat flour cultures than on wheat or barley cultures after 40 to 80 h of growth. Ergosterol concentration was also significantly lower in oat cultures than in wheat cultures after growth. A hexane extract from oats added to wheat flour also inhibited Fusarium growth, and Fusarium grew better on hexane-defatted oat flour. The growth of Fusarium on oat flour was significantly and negatively affected by the oil concentration in the oat, in a linear relationship. A hexane-soluble chemical in oat flour appears to inhibit Fusarium growth and might contribute to oat's resistance to Fusarium head blight. Oxygenated fatty acids, including hydroxy, dihydroxy, and epoxy fatty acids, were identified in the hexane extracts and are likely candidates for causing the inhibition.

  20. Acute effects of an Avena sativa herb extract on responses to the Stroop Color-Word test.

    Science.gov (United States)

    Berry, Narelle M; Robinson, Matthew J; Bryan, Janet; Buckley, Jonathan D; Murphy, Karen J; Howe, Peter R C

    2011-07-01

    Extracts from oat (Avena sativa) herb may benefit cognitive performance. This study investigated whether Neuravena(®), an oat herb extract, could acutely improve responses to the Stroop Color-Word test, a measure of attention and concentration and the ability to maintain task focus. Elderly volunteers with below-average cognitive performance consumed single doses (0, 1600, and 2400 mg) of oat herb extract at weekly intervals in a double-blind, randomized, crossover comparison. Resting blood pressure (BP) was assessed before and after supplementation, and a Stroop test was performed. Significantly fewer errors were made during the color-naming component of the Stroop test after consuming the 1600-mg dose than after the 0-mg or 2400-mg doses (F (1,36)=18.85, p<0.001). In 7 subjects with suspected cognitive impairment, Stroop interference score was also improved by the 1600-mg dose compared to 0- and 2400-mg doses (F (1, 34)=2.40, p<0.01). Resting BP was unaffected by supplementation. Taking 1600 mg of oat herb extract may acutely improve attention and concentration and the ability to maintain task focus in older adults with differing levels of cognitive status.

  1. Mitochondrial structural and antioxidant system responses to aging in oat (Avena sativa L.) seeds with different moisture contents.

    Science.gov (United States)

    Xia, Fangshan; Wang, Xianguo; Li, Manli; Mao, Peisheng

    2015-09-01

    We observed the relationship between lifespan and mitochondria, including antioxidant systems, ultrastructure, and the hydrogen peroxide and malondialdehyde contents in 4 h imbibed oat (Avena sativa L.) seeds that were aged with different moisture contents (4%, 10% and 16%) for 0 (the control), 8, 16, 24, 32 and 40 d at 45 °C. The results showed that the decline in the oat seed vigor and in the integrity of the mitochondrial ultrastructure occurred during the aging process, and that these changes were enhanced by higher moisture contents. Mitochondrial antioxidants in imbibed oat seeds aged with a 4% moisture content were maintained at higher levels than imbibed oat seeds aged with a 10% and 16% moisture content. These results indicated that the levels of mitochondrial antioxidants and malondialdehyde after imbibition were related to the integrity of the mitochondrial membrane in aged oat seeds. The scavenging role of mitochondrial superoxide dismutase was inhibited in imbibed oat seeds aged at the early stage. Monodehydroascorbate reductase and dehydroascorbate reductase played more important roles than glutathione reductase in ascorbate regeneration in aged oat seeds during imbibition. Copyright © 2015 Elsevier Masson SAS. All rights reserved.

  2. In vitro and in vivo protein phosphorylation in Avena sativa L. coleoptiles: effects of Ca2+, calmodulin antagonists, and auxin

    Science.gov (United States)

    Veluthambi, K.; Poovaiah, B. W.

    1986-01-01

    In vitro and in vivo protein phosphorylations in oat (Avena sativa L.) coleoptile segments were analyzed by sodium dodecyl sulfate polyacrylamide gel electrophoresis and by two-dimensional gel electrophoresis. In vitro phosphorylation of several polypeptides was distinctly promoted at 1 to 15 micromolar free Ca2+ concentrations. Ca2(+)-stimulated phosphorylation was markedly reduced by trifluoperazine, chlorpromazine, and naphthalene sulfonamide (W7). Two polypeptides were phosphorylated both under in vitro and in vivo conditions, but the patterns of phosphorylation of several other polypeptides were different under the two conditions indicating that the in vivo phosphorylation pattern of proteins is not truly reflected by in vitro phosphorylation studies. Trifluoperazine, W7, or ethylene glycol-bis-(beta-aminoethyl ether)-N,N'-tetraacetic acid (EGTA) + calcium ionophore A23187 treatments resulted in reduced levels of in vivo protein phosphorylation of both control and auxin-treated coleoptile segments. Analysis by two-dimensional electrophoresis following in vivo phosphorylation revealed auxin-dependent changes of certain polypeptides. A general inhibition of phosphorylation by calmodulin antagonists suggested that both control and auxin-treated coleoptiles exhibited Ca2+, and calmodulin-dependent protein phosphorylation in vivo.

  3. Vitamin E levels in soybean (Glycine max (L.) Merr.) expressing a p-hydroxyphenylpyruvate gene from oat (Avena sativa L.).

    Science.gov (United States)

    Kramer, Catherine M; Launis, Karen L; Traber, Maret G; Ward, Dennis P

    2014-04-16

    The enzyme p-hydroxyphenylpyruvate dioxygenase (HPPD) is ubiquitous in plants and functions in the tyrosine catabolic pathway, resulting in the formation of homogentisate. Homogentisate is the aromatic precursor of all plastoquinones and tocochromanols, including tocopherols and tocotrienols. Soybean (Glycine max (L.) Merr.) has been genetically modified to express the gene avhppd-03 that encodes the protein AvHPPD-03 derived from oat (Avena sativa L.). The AvHPPD-03 isozyme has an inherent reduced binding affinity for mesotrione, a herbicide that inhibits the wild-type soybean HPPD enzyme. Expression of avhppd-03 in soybean plants confers a mesotrione-tolerant phenotype. Seeds from three different avhppd-03-expressing soybean events were quantitatively assessed for content of eight vitamin E isoforms. Although increased levels of two tocopherol isoforms were identified for each of the three soybean events, they were within, or not substantially different from, the ranges of these isoforms found in nontransgenic soybean varieties. The increases of these tocopherols in the avhppd-03-expressing soybean events may have a slight benefit with regard to vitamin E nutrition but, given the commercial processing of soybeans, are unlikely to have a material impact on human nutrition with regard to vitamin E concentrations in soybean oil.

  4. Genome-Wide Association Mapping of Barley Yellow Dwarf Virus Tolerance in Spring Oat (Avena sativa L..

    Directory of Open Access Journals (Sweden)

    Bradley J Foresman

    Full Text Available Barley yellow dwarf viruses (BYDVs are responsible for the disease barley yellow dwarf (BYD and affect many cereals including oat (Avena sativa L.. Until recently, the molecular marker technology in oat has not allowed for many marker-trait association studies to determine the genetic mechanisms for tolerance. A genome-wide association study (GWAS was performed on 428 spring oat lines using a recently developed high-density oat single nucleotide polymorphism (SNP array as well as a SNP-based consensus map. Marker-trait associations were performed using a Q-K mixed model approach to control for population structure and relatedness. Six significant SNP-trait associations representing two QTL were found on chromosomes 3C (Mrg17 and 18D (Mrg04. This is the first report of BYDV tolerance QTL on chromosome 3C (Mrg17 and 18D (Mrg04. Haplotypes using the two QTL were evaluated and distinct classes for tolerance were identified based on the number of favorable alleles. A large number of lines carrying both favorable alleles were observed in the panel.

  5. Identification of genes in a partially resistant genotype of Avena sativa expressed in response to Puccinia coronata infection

    Directory of Open Access Journals (Sweden)

    Yolanda eLoarce

    2016-05-01

    Full Text Available Cultivated oat (Avena sativa, an important crop in many countries, can suffer significant losses through infection by the fungus Puccinia coronata, the causal agent of crown rust disease. Understanding the molecular basis of existing partial resistance to this disease might provide targets of interest for crop improvement programs. A suppressive subtractive hybridization (SSH library was constructed using cDNA from the partially resistant oat genotype MN841801-1 after inoculation with the pathogen. A total of 929 genes returned a BLASTx hit and were annotated under different GO terms, including 139 genes previously described as participants in mechanisms related to the defense response and signal transduction. Among these were genes involved in pathogen recognition, cell-wall modification, oxidative burst/ROS scavenging, and abscisic acid biosynthesis, as well genes related to inducible defense responses mediated by salicylic and jasmonic acid (although none of which had been previously reported involved in strong responses. These findings support the hypothesis that basal defense mechanisms are the main systems operating in oat partial resistance to P. coronata. When the expression profiles of 20 selected genes were examined at different times following inoculation with the pathogen, the partially resistant genotype was much quicker in mounting a response than a susceptible genotype. Additionally, a number of genes not previously described in oat transcriptomes were identified in this work, increasing our molecular knowledge of this crop.

  6. Identification of Genes in a Partially Resistant Genotype of Avena sativa Expressed in Response to Puccinia coronata Infection

    Science.gov (United States)

    Loarce, Yolanda; Navas, Elisa; Paniagua, Carlos; Fominaya, Araceli; Manjón, José L.; Ferrer, Esther

    2016-01-01

    Cultivated oat (Avena sativa), an important crop in many countries, can suffer significant losses through infection by the fungus Puccinia coronata, the causal agent of crown rust disease. Understanding the molecular basis of existing partial resistance to this disease might provide targets of interest for crop improvement programs. A suppressive subtractive hybridization (SSH) library was constructed using cDNA from the partially resistant oat genotype MN841801-1 after inoculation with the pathogen. A total of 929 genes returned a BLASTx hit and were annotated under different GO terms, including 139 genes previously described as participants in mechanisms related to the defense response and signal transduction. Among these were genes involved in pathogen recognition, cell-wall modification, oxidative burst/ROS scavenging, and abscisic acid biosynthesis, as well genes related to inducible defense responses mediated by salicylic and jasmonic acid (although none of which had been previously reported involved in strong responses). These findings support the hypothesis that basal defense mechanisms are the main systems operating in oat partial resistance to P. coronata. When the expression profiles of 20 selected genes were examined at different times following inoculation with the pathogen, the partially resistant genotype was much quicker in mounting a response than a susceptible genotype. Additionally, a number of genes not previously described in oat transcriptomes were identified in this work, increasing our molecular knowledge of this crop. PMID:27303424

  7. [A sudden rise in INR due to combination of Tribulus terrestris, Avena sativa, and Panax ginseng (Clavis Panax)].

    Science.gov (United States)

    Turfan, Murat; Tasal, Abdurrahman; Ergun, Fatih; Ergelen, Mehmet

    2012-04-01

    Warfarin sodium is an antithrombin agent used in patients with prosthetic valve and atrial fibrillation. However, there are many factors that can change the effectiveness of the drug. Today, herbal mixtures promoted through targeted print and visual media can lead to sudden activity changes in patients using warfarin. In this case report we will present two cases with a sudden rise in INR due to using combination of Tribulus terrestris, Avena sativa and Panax ginseng (Panax Clavis). Two patients who used warfarin due to a history of aortic valve replacement (case 1) and atrial fibrillation (case 2) were admitted to the hospital due very high levels of INR detected during routine follow-up. Both patients had used an herbal medicine called ''Panax'' during the last month. The patients gave no indication regarding a change in diet or the use of another agent that might interact with warfarin. In cases where active bleeding could not be determinated, we terminated the use of the drug and re-evaluated dosage of warfarin before finally discharging the patient.

  8. Deriving isolates of powdery mildew (Blumeria graminis DC. f.sp. avenae Em. Marchal. in common oat (Avena sativa L. and using them to identify selected resistance genes

    Directory of Open Access Journals (Sweden)

    Sylwia Okoń

    2012-12-01

    Full Text Available Powdery mildew in common oat is caused by Blumeria graminis DC. f.sp. avenae Em. Marchal. Host-pathogen tests are commonly used to identify and locate resistance genes to powdery mildew in cereals. The aim of the study was to determine the virulence of powdery mildew isolates obtained from powdery mildew populations harvested in Poland and to identify OMR1, OMR2 and OMR3 resistance genes to powdery mildew in F2 populations of inter-cultivar hybrids of common oat: Bruno × Fuchs, Jumbo × Fuchs and Mostyn × Fuchs. On the basis of the analysis conducted, isolates enabling division of the studied populations into groups of resistant and susceptible plants were selected. M10 and M14 isolates were chosen for the population which was obtained from crossbreeding of ‘Bruno’ with ‘Fuchs’; these isolates demonstrated avirulence to Bruno cultivar containing OMR1 gene. In order to divide population obtained from crossbreeding of ‘Jumbo’ with ‘Fuchs’, M13 and M16 isolates were chosen; they demonstrated avirulence to the cultivar Jumbo containing the OMR2 gene. On the basis of the tests conducted, it was impossible to select isolates characterised by avirulence to the OMR3 gene. In the F2 population of Bruno × Fuchs and Jumbo × Fuchs hybrids, a division was made into resistant and susceptible plants. The obtained results were verified by the 2 test; the proportion in the dispersion matching model was found to be 3 resistant plants: 1 sensitive plant both in the Bruno × Fuchs and Jumbo × Fuchs populations. Such dispersion indicated that the resistance to powdery mildew in the studied cultivars Bruno and Jumbo was conditioned by single dominant genes.

  9. Efecto fitotóxico de Baccharis ulicina sobre la germinación y crecimiento inicial de Avena sativa, Lolium perenne y Raphanus sativus

    OpenAIRE

    Tucat, Guillermo; Bentivegna, Diego Javier; Fernandez, Osvaldo Alberto; Busso, Carlos Alberto; Brevedan, Roberto; Mujica, Maria de la Merced; Torres, Yanina Alejandra; Daddario, Juan Facundo Fabian; Ithurrart, Leticia Soledad; Giorgetti, Hugo Dosindo; Rodriguez, Gustavo Dionisio; Montenegro, Oscar Alberto; Baioni, Sandra Sonia; Entio, Lisandro Jose; Fioretti, Maria Nelida

    2015-01-01

    Baccharis ulicina es una maleza ampliamente distribuida en los pastizales de la zona semiárida argentina. A fin de evaluar sus posibles efectos alelopáticos, se utilizaron extractos acuosos de B. ulicina (hoja, tallo, raíz y planta entera) a dos concentraciones (50 y 150 g tejido/L agua) sobre la germinación y crecimiento inicial de Avena sativa , Lolium perenne y Raphanus sativus . Para cada especie se regaron 100 semillas y se mantuvieron a 25°C y oscuridad. Se registraron la germina...

  10. Effect of treated and untreated domestic wastewater on seed germination, seedling growth and amylase and lipase activities in Avena sativa L.

    Science.gov (United States)

    Fendri, Imen; Ben Saad, Rania; Khemakhem, Bassem; Ben Halima, Nihed; Gdoura, Radhouane; Abdelkafi, Slim

    2013-05-01

    Oats (Avena sativa L.) are a potential economically viable source of lipids and starch for use in foods. The aim of this study was to determine the effect of treated and untreated urban wastewater on seed germination, growth parameters and lipase and amylase activities in A. sativa. Untreated wastewater was highly toxic in nature and had an inhibitory effect on seed germination and seedling growth. However, after bacterial treatment, its toxicity was significantly reduced and it showed improved seed germination. It was observed that treated wastewater had no inhibitory effect on seedling growth parameters. However, A. sativa seeds treated with untreated effluent showed reduced lipase and amylase activities. Treated wastewater could be used for irrigation purposes provided that it satisfies other conditions fixed by legislation. © 2012 Society of Chemical Industry.

  11. Chitinases and β-1,3-Glucanases in the Apoplastic Compartment of Oat Leaves (Avena sativa L.) 1

    Science.gov (United States)

    Fink, Werner; Liefland, Mathias; Mendgen, Kurt

    1988-01-01

    To isolate chitinases and β-1,3-glucanases from the intercellular space of oats (Avena sativa L.), primary leaves were infiltrated with buffer and subjected to gentle centrifugation to obtain intercellular washing fluid (IWF). Approximately 5% of the chitinase and 10% of the β-1,3-glucanase activity of the whole leaf were released. Only small amounts (0.01-0.03%) of the intracellular marker malate-dehydrogenase were released into the IWF during infiltration. Activities of chitinase and β-1,3-glucanase in the IWF and in the leaf extract were compared by different chromatographic methods. On Sephadex G-75, chitinase appeared as a single peak (Mr 29.8 kD) both in IWF and homogenate. β-1,3-Glucanase, however, showed two peaks in the IWF (Mr 52 and 31.3 kD), whereas the elution pattern of the homogenate showed only one major peak at 22 kD. Chromatofocusing indicated that the IWF contained four chitinases and five β-1,3-glucanases. The elution pattern of the homogenate and IWF were similar with regard to the elution pH, but the peak intensities were distinctly different. Our results demonstrate that extracellular β-1,3-glucanases are different from those located intracellularly. Extracellular and intracellular chitinases do not differ in molecular properties, except for one isozyme which seems to be confined to the extracellular space. We suggest that both enzymes might play a special role in pathogenesis during fungal infection. Images Fig. 6 PMID:16666294

  12. Proteomic and Physiological Analysis of the Response of Oat (Avena sativa) Seeds to Heat Stress under Different Moisture Conditions.

    Science.gov (United States)

    Chen, Lingling; Chen, Quanzhu; Kong, Lingqi; Xia, Fangshan; Yan, Huifang; Zhu, Yanqiao; Mao, Peisheng

    2016-01-01

    Seeds lose their viability when they are exposed to high temperature and moisture content (MC) during storage. The expression and metabolism of proteins plays a critical role in seed resistance to heat stress. However, the proteome response to heat stress in oat (Avena sativa) seeds during storage has not been revealed. To understand mechanisms of heat stress acclimation and tolerance in oat seeds, an integrated physiological and comparative proteomic analysis was performed on oat seeds with different MC during heat stress. Oat seeds with 10% and 16% MC were subjected to high temperatures (35, 45, and 50°C) for 24 and 2 days, respectively, and changes in physiological and biochemical characteristics were analyzed. The results showed that seed vigor decreased significantly with temperature increase from 35 to 50°C. Also, the proline content in 10% MC seeds decreased significantly (p heat treatment from 35 to 50°C. There were no significant differences in malondialdehyde content in 10% MC seeds with temperature from 35 to 50°C, but a significant (p heat shock proteins and two ATP synthases, have important roles in the mobilization of carbohydrates and energy, and in the balance between synthesis and degradation of other proteins during seed deterioration. The up-regulation of argininosuccinate synthase participated in proline biosynthesis at 16% MC, which is important for maintaining reactive oxygen species homeostasis for the resistance of heat stress. In summary, heat-responsive protein species and mitochondrial respiratory metabolism were sensitive to high temperature and MC treatment. These studies provide a new insight into acclimation and tolerance to heat stress in oat seeds.

  13. Basis for changes in the auxin-sensitivity of Avena sativa (oat) leaf-sheath pulvini during the gravitropic response

    Science.gov (United States)

    Kim, D.; Kaufman, P. B.

    1995-01-01

    During the gravitropic response, auxin-sensitivity of the lower flanks of leaf-sheath pulvini of Avena sativa (oat) is at least 1000-fold higher than those of the upper flanks and non-gravistimulated pulvini. When the pulvini are treated with 1 mM Ca2+, a 10-fold increase in auxin-sensitivity of the pulvini is observed. Related to this difference in auxin-sensitivity, in vitro activation of the vanadate-sensitive H(-)-ATPase by IAA was observed. Results show that the activation of the H(+)-ATPase by IAA is probably mediated by soluble protein factors and that the H(+)-ATPase prepared from the lower flanks is activated by IAA with a 1000-fold higher auxin-sensitivity as compared with that from the upper flanks of the graviresponding pulvini. Ammonium sulfate fractionation experiments show that these soluble protein factors are in the 30 to 60% fraction. Auxin-binding assays reveal that lower flanks contain more high-affinity soluble auxin-binding sites (kD; on the order of 10(-9) M) and less low-affinity soluble auxin-binding sites (kD; on the order of 10(-6) M) than upper flanks. It is concluded that differential auxin-sensitivity of graviresponding oat-shoot pulvini is achieved by the modulation of affinities of auxin-binding sites in upper and lower flanks of the pulvini, that Ca2+ is involved in such modulation, and that one of the probable cellular functions of these auxin binding sites is the activation of the proton pump on the plasma membranes.

  14. Low-temperature and time-resolved spectroscopic characterization of the LOV2 domain of Avena sativa phototropin

    Energy Technology Data Exchange (ETDEWEB)

    Gauden, Magdalena; Crosson, Sean; van Stokkum, I.H.; Grondelle, Rienkvan; Moffat, Keith; Kennis, John T. (UC)

    2004-12-13

    The phototropins are plant blue-light receptors that base their light-dependent action on the reversible formation of a covalent bond between a flavin mononucleotide (FMN) cofactor and a conserved cysteine residue in light, oxygen or voltage (LOV) domains. The spectroscopic properties of the LOV2 domain of phototropin 1 of Avena sativa (oat) have been investigated by means of low-temperature absorption and fluorescence spectroscopy and by time-resolved fluorescence spectroscopy. The low-temperature absorption spectrum of the LOV2 domain showed a fine structure around 473 nm, indicating heterogeneity in the flavin binding pocket. The fluorescence quantum yield of the flavin cofactor increased from 0.13 to 0.41 upon cooling the sample from room temperature to 77 K. A pronounced phosphorescence emission around 600 nm was observed in the LOV2 domain between 77 and 120 K, allowing for an accurate positioning of the flavin triplet state in the LOV2 domain at 16900 cm{sup -1}. Fluorescence from the cryotrapped covalent adduct state was extremely weak, with a fluorescence spectrum showing a maximum at 440 nm. Time-resolved fluorescence experiments utilizing a synchroscan streak camera revealed a singlet-excited state lifetime of the LOV2 domain of 2.4 ns. FMN dissolved in aqueous solution showed a pH-dependent lifetime ranging between 2.9 ns at pH 2.0 to 4.7 ns at pH 8.0. No spectral shifting of the flavin emission was observed in the LOV2 domain nor in FMN in aqueous solution.

  15. Preferred carbon precursors for lipid labelling in the heterotrophic endosperm of developing oat (Avena sativa L.) grains.

    Science.gov (United States)

    Grimberg, Åsa

    2014-10-01

    Oat (Avena sativa L.) is unusual among the cereal grains in storing high amounts of oil in the endosperm; up to 90% of total grain oil. By using oat as a model species for oil metabolism in the cereal endosperm, we can learn how to develop strategies to redirect carbon from starch to achieve high-oil yielding cereal crops. Carbon precursors for lipid synthesis were compared in two genetically close oat cultivars with different endosperm oil content (about 6% and 10% of grain dw, medium-oil; MO, and high-oil; HO cultivar, respectively) by supplying a variety of (14)C-labelled substrates to the grain from both up- and downstream parts of glycolysis, either through detached oat panicles in vitro or by direct injection in planta. When supplied by direct injection, (14)C from acetate was identified to label the lipid fraction of the grain to the highest extent among substrates tested; 46% of net accumulated (14)C, demonstrating its applicability as a marker for lipids in the endosperm. Time course analyses of injected (14)C acetate during grain development suggested a more efficient transfer of fatty acids from polar lipids to triacylglycerol in the HO as compared to the MO cultivar, and turnover of triacylglycerol was suggested to not play a major role for the final oil content of oat grain endosperm despite the low amount of protective oleosins in this tissue. Moreover, availability of light was shown to drastically affect grain net carbon accumulation from (14)C-sucrose when supplied through detached panicles for the HO cultivar. Copyright © 2014 Elsevier Masson SAS. All rights reserved.

  16. Altered Growth Response to Exogenous Auxin and Gibberellic Acid by Gravistimulation in Pulvini of Avena sativa1

    Science.gov (United States)

    Brock, Thomas G.; Kaufman, Peter B.

    1988-01-01

    Pulvini of excised segments from oats (Avena sativa L. cv Victory) were treated unilaterally with indoleacetic acid (IAA) or gibberellic acid (GA3) with or without gravistimulation to assess the effect of gravistimulation on hormone action. Optimum pulvinus elongation growth (millimeters) and segment curvature (degrees) over 24 hours were produced by 100 micromolar IAA in vertical segments. The curvature response to IAA at levels greater than 100 micromolar, applied to the lower sides of gravistimulated (90°) pulvini, was significantly less than the response to identical levels in vertical segments. Furthermore, the bending response of pulvini to 100 micromolar IAA did not vary significantly over a range of presentation angles between 0 and 90°. In contrast, the response to IAA at levels less than 10 micromolar, with gravistimulation, was approximately the sum of the responses to gravistimulation alone and to IAA without gravistimulation. This was observed over a range of presentation angles. Also, GA3 (0.3-30 micromolar) applied to the lower sides of horizontal segments significantly enhanced pulvinus growth and segment curvature, although exogenous GA3 over a range of concentrations had no effect on pulvinus elongation growth or segment curvature in vertical segments. The response to GA3 (10 micromolar) plus IAA (1.0 or 100 micromolar) was additive for either vertical or horizontal segments. These results indicate that gravistimulation produces changes in pulvinus responsiveness to both IAA and GA3 and that the changes are unique for each growth regulator. It is suggested that the changes in responsiveness may result from processes at the cellular level other than changes in hormonal sensitivity. PMID:11537872

  17. Genome-wide association study for oat (Avena sativa L.) beta-glucan concentration using germplasm of worldwide origin.

    Science.gov (United States)

    Newell, Mark A; Asoro, Franco G; Scott, M Paul; White, Pamela J; Beavis, William D; Jannink, Jean-Luc

    2012-12-01

    Detection of quantitative trait loci (QTL) controlling complex traits followed by selection has become a common approach for selection in crop plants. The QTL are most often identified by linkage mapping using experimental F(2), backcross, advanced inbred, or doubled haploid families. An alternative approach for QTL detection are genome-wide association studies (GWAS) that use pre-existing lines such as those found in breeding programs. We explored the implementation of GWAS in oat (Avena sativa L.) to identify QTL affecting β-glucan concentration, a soluble dietary fiber with several human health benefits when consumed as a whole grain. A total of 431 lines of worldwide origin were tested over 2 years and genotyped using Diversity Array Technology (DArT) markers. A mixed model approach was used where both population structure fixed effects and pair-wise kinship random effects were included. Various mixed models that differed with respect to population structure and kinship were tested for their ability to control for false positives. As expected, given the level of population structure previously described in oat, population structure did not play a large role in controlling for false positives. Three independent markers were significantly associated with β-glucan concentration. Significant marker sequences were compared with rice and one of the three showed sequence homology to genes localized on rice chromosome seven adjacent to the CslF gene family, known to have β-glucan synthase function. Results indicate that GWAS in oat can be a successful option for QTL detection, more so with future development of higher-density markers.

  18. Low-temperature and time-resolved spectroscopic characterization of the LOV2 domain of Avena sativa phototropin 1

    Science.gov (United States)

    Gauden, Magdalena; Crosson, Sean; van Stokkum, I. H. M.; van Grondelle, Rienk; Moffat, Keith; Kennis, John T. M.

    2004-09-01

    The phototropins are plant blue-light receptors that base their light-dependent action on the reversible formation of a covalent bond between a flavin mononucleotide (FMN) cofactor and a conserved cysteine residue in light, oxygen or voltage (LOV) domains. The spectroscopic properties of the LOV2 domain of phototropin 1 of Avena sativa (oat) have been investigated by means of low-temperature absorption and fluorescence spectroscopy and by time-resolved fluorescence spectroscopy. The low-temperature absorption spectrum of the LOV2 domain showed a fine structure around 473 nm, indicating heterogeneity in the flavin binding pocket. The fluorescence quantum yield of the flavin cofactor increased from 0.13 to 0.41 upon cooling the sample from room temperature to 77 K. A pronounced phosphorescence emission around 600 nm was observed in the LOV2 domain between 77 and 120 K, allowing for an accurate positioning of the flavin triplet state in the LOV2 domain at 16900 cm-1. Fluorescence from the cryotrapped covalent adduct state was extremely weak, with a fluorescence spectrum showing a maximum at 440 nm. Time-resolved fluorescence experiments utilizing a synchroscan streak camera revealed a singlet-excited state lifetime of the LOV2 domain of 2.4 ns. FMN dissolved in aqueous solution showed a pH-dependent lifetime ranging between 2.9 ns at pH 2.0 to 4.7 ns at pH 8.0. No spectral shifting of the flavin emission was observed in the LOV2 domain nor in FMN in aqueous solution.

  19. Polyamine levels as related to growth, differentiation and senescence in protoplast-derived cultures of Vigna aconitifolia and Avena sativa

    Science.gov (United States)

    Kaur Sawhney, R.; Shekhawat, N. S.; Galston, A. W.

    1985-01-01

    We have previously reported that aseptically cultured mesophyll protoplasts of Vigna divide rapidly and regenerate into complete plants, while mesophyll protoplasts of Avena divide only sporadically and senesce rapidly after isolation. We measured polyamine titers in such cultures of Vigna and Avena, to study possible correlations between polyamines and cellular behavior. We also deliberately altered polyamine titer by the use of selective inhibitors of polyamine biosynthesis, noting the effects on internal polyamine titer, cell division activity and regenerative events. In Vigna cultures, levels of free and bound putrescine and spermidine increased dramatically as cell division and differentiation progressed. The increase in bound polyamines was largest in embryoid-forming callus tissue while free polyamine titer was highest in root-forming callus. In Avena cultures, the levels of total polyamines decreased as the protoplast senesced. The presence of the inhibitors alpha-difluoromethyl-arginine (specific inhibitor of arginine decarboxylase), alpha-difluoromethylornithine (specific inhibitor of ornithine decarboxylase) and dicyclohexylamine (inhibitor of spermidine synthase) reduced cell division and organogenesis in Vigna cultures. Addition of low concentration of polyamines to such cultures containing inhibitors or removal of inhibitors from the culture medium restored the progress of growth and differentiation with concomitant increase in polyamine levels.

  20. Studies on morpho-physiological characters of different Avena ...

    African Journals Online (AJOL)

    Seven species of oat (Avena) were evaluated for their relative drought tolerance under soil moisture stress. The plant height, leaf area production and biomass yield reduced under soil moisture stress. Among the species tested, minimum reduction in height was recorded in Avena vaviloviana, Avena abyssinica and Avena ...

  1. Transfer of several phytopathogenic Pseudomonas species to Acidovorax as Acidovorax avenae subsp. avenae subsp. nov., comb. nov., Acidovorax avenae subsp. citrulli, Acidovorax avenae subsp. cattleyae, and Acidovorax konjaci.

    Science.gov (United States)

    Willems, A; Goor, M; Thielemans, S; Gillis, M; Kersters, K; De Ley, J

    1992-01-01

    DNA-rRNA hybridizations, DNA-DNA hybridizations, polyacrylamide gel electrophoresis of whole-cell proteins, and a numerical analysis of carbon assimilation tests were carried out to determine the relationships among the phylogenetically misnamed phytopathogenic taxa Pseudomonas avenae, Pseudomonas rubrilineans, "Pseudomonas setariae," Pseudomonas cattleyae, Pseudomonas pseudoalcaligenes subsp. citrulli, and Pseudomonas pseudoalcaligenes subsp. konjaci. These organisms are all members of the family Comamonadaceae, within which they constitute a separate rRNA branch. Only P. pseudoalcaligenes subsp. konjaci is situated on the lower part of this rRNA branch; all of the other taxa cluster very closely around the type strain of P. avenae. When they are compared phenotypically, all of the members of this rRNA branch can be differentiated from each other, and they are, as a group, most closely related to the genus Acidovorax. DNA-DNA hybridization experiments showed that these organisms constitute two genotypic groups. We propose that the generically misnamed phytopathogenic Pseudomonas species should be transferred to the genus Acidovorax as Acidovorax avenae and Acidovorax konjaci. Within Acidovorax avenae we distinguished the following three subspecies: Acidovorax avenae subsp. avenae, Acidovorax avenae subsp. cattleyae, and Acidovorax avenae subsp. citrulli. Emended descriptions of the new taxa are presented.

  2. [Comparative cytogenetic analysis of hexaploid Avena L. species].

    Science.gov (United States)

    Badaeva, E D; Shelukhina, O Iu; Dedkova, O S; Loskutov, I G; Pukhal'skiĭ, V A

    2011-06-01

    Using C-banding method and in situ hybridization with the 45S and 5S rRNA gene probes, six hexaploid species of the genus Avena L. with the ACD genome constitution were studied to reveal evolutionary karyotypic changes. Similarity in the C-banding patterns of chromosomal and in the patterns of distribution of the rRNA gene families suggests a common origin of all hexaploid species. Avena fatua is characterized by the broadest intraspecific variation of the karyotype; this species displays chromosomal variants typical of other hexaploid species of Avena. For instance, a translocation with the involvement of chromosome 5C marking A. occidentalis was discovered in many A. fatua accessions, whereas in other representatives of this species this chromosome is highly similar to the chromosome of A. sterilis. Only A. fatua and A. sativa show slight changes in the morphology and in the C-banding pattern of chromosome 2C. These results can be explained either by a hybrid origin of A. fatua or by the fact that this species is an intermediate evolutionary form of hexaploid oats. The 7C-17 translocation was identified in all studied accessions of wild and weedy species (A. sterilis, A. fatua, A. ludoviciana, and A. occidentalis) and in most A. sativa cultivars, but it was absent in A. byzantina and in two accessions of A. sativa. The origin and evolution of the Avena hexaploid species are discussed in context of the results.

  3. Drought stress induced changes in lipid peroxidation and antioxidant system in genus Avena.

    Science.gov (United States)

    Pandey, Harish C; Baig, M J; Chandra, A; Bhatt, R K

    2010-07-01

    Seven species of genus Avena viz., Avena sativa, Avena strigosa, Avena brevis, Avena vaviloviana, Avena abyssinica, Avena marocana and Avena sterilis were used to study the impact of drought stress on lipid peroxidation and other antioxidant enzymes. Maximum increase in the catalase activity was recorded in A. vaviloviana (129.97%) followed by A. sativa (122.82%) and A. brevis (83.38%) at vegetative stage; however at flowering stage the maximum increase was reported in A. sativa (25.62%) followed by A. sterilis (20.46%) and A. brevis (18.53%). At vegetative stage drought, maximum increase in peroxidase activity was recorded in A. sativa (122.82%) followed by A. brevis (83.38%) and A. sterilis (49.78%). Flowering stage drought, showed maximum increase in A. Sativa (27.09%) followed by A. marocana (23.50%) and A. sterilis (20.46%). A. sativa and A. sterilis showed stress tolerance at both the stages by accumulating higher percentage of peroxidase followed by A. brevis at vegetative and A. marocana at flowering stage. Level of lipid peroxidation in terms of Malondialdehyde (MDA) content was increased in the leaves when plants were subjected to moisture stress. The rate of increase in lipid peroxidation occurs irrespective of stage however; maximum increase was recorded in A. strigosa at both the stages. Avena species which showed high level of MDA content, indicates more lipid peroxidation and more membrane permeability and are comparatively more susceptible for water stress than those which produce less Malondialdehyde (MDA) content at higher magnitude of water stress such species have better capability for moisture stress tolerance.

  4. Avaliação dos teores de fibra alimentar e de beta-glicanas em cultivares de aveia (Avena sativa L Evaluation of dietary fiber and beta-glucan levels in oat (Avena sativa L cultivars

    Directory of Open Access Journals (Sweden)

    Luiz C. GUTKOSKI

    1999-12-01

    Full Text Available A fibra alimentar é composta por celulose, hemiceluloses, gomas, pectinas e mucilagens sendo classificada em solúvel e insolúvel, quanto a sua solubilidade em água. As beta-glicanas são componentes da fibra alimentar solúvel presentes na aveia e sua importância é devido às propriedades funcionais e aos efeitos hipocolesterolêmicos e hipoglicêmicos apresentados. O presente trabalho tem como objetivo avaliar os teores de fibra alimentar solúvel, insolúvel e total e de beta-glicanas de cultivares de aveia recomendados pela Comissão Brasileira de Pesquisa de Aveia. Grãos de aveia (Avena sativa, L foram descascados, as cariopses moídas e as amostras acondicionadas e armazenadas à temperatura de -20° C. Para a análise de fibra alimentar foi adotada a metodologia da AOAC (1997. Entre os cultivares analisados, UPF 7, UPF 13, UPF 14 e UPF 16 apresentaram os maiores teores de fibra alimentar insolúvel. Os maiores teores de fibra alimentar solúvel foram verificados nos cultivares UFRGS 7, CTC 13, UPF 16 e CTC 2. O cultivar UPF 16 apresentou o maior teor de fibra alimentar total, seguido de UFRGS 7, CTC 13 e UFRGS 18. Para a determinação de beta-glicanas foi adotada a metodologia da AOAC (1997. Os maiores teores de beta-glicanas foram verificados nos cultivares UFRGS 7, UPF 14 e UFRGS 18.The dietary fiber is composed by cellulose, hemi-celluloses, gums, pectins, and mucilages, being classified as soluble or insoluble depending on its solubility in water. Beta-glucans are a fraction of the soluble dietary fiber, being important due to its functional properties and effects in reducing cholesterol and glucose. This work aimed at evaluating the levels of soluble, insoluble, and total dietary fiber, as well as the amount of beta-glucans, present in grains of oat cultivars recommended by the Brazilian Commission for Oat Research. Oat grains were hulled, the caryopses were ground and the samples packaged and stored at temperature of -20º

  5. The genetics of resistance to powdery mildew in cultivated oats (Avena sativa L.): current status of major genes.

    Science.gov (United States)

    Hsam, Sai L K; Mohler, Volker; Zeller, Friedrich J

    2014-05-01

    The genetics of resistance to powdery mildew caused by Blumeria graminis f. sp. avenae of four cultivated oats was studied using monosomic analysis. Cultivar 'Bruno' carries a gene (Pm6) that shows a recessive mode of inheritance and is located on chromosome 10D. Cultivar 'Jumbo' possesses a dominant resistance gene (Pm1) on chromosome 1C. In cultivar 'Rollo', in addition to the gene Pm3 on chromosome 17A, a second dominant resistance gene (Pm8) was identified and assigned to chromosome 4C. In breeding line APR 122, resistance was conditioned by a dominant resistance gene (Pm7) that was allocated to chromosome 13A. Genetic maps established for resistance genes Pm1, Pm6 and Pm7 employing amplified fragment length polymorphism (AFLP) markers indicated that these genes are independent of each other, supporting the results from monosomic analysis.

  6. Oat (Avena sativa L.).

    Science.gov (United States)

    Gasparis, Sebastian; Nadolska-Orczyk, Anna

    2015-01-01

    Agrobacterium-mediated transformation is a suitable method to transform different cultivars using different systems of A. tumefaciens strains and binary vectors as well as selection cassettes. We describe here a detailed protocol for two cultivars, one naked and one husked, using the AGL1 strain and the pGreen vector containing the nptII selection cassette ( http://www.pgreen.ac.uk/ ), suitable for oat as well as other cereals. The pGreen vector system was recently developed for pBract ( http://www.bract.org/ ) and its transformation ability for cereals was proved. Assuming our experience and the latest knowledge on Agrobacterium-mediated transformation of cereals, we suggest using in the protocol one of the newly developed pBract or pCAMBIA ( http://www.cambia.org/daisy/cambia/ ) vector systems which carry different selection cassettes. The commonly used selection genes nptII, bar, and hpt were proved to be applicable for oat transformation and might be used as needed.

  7. Genome sequence of the rice-pathogenic bacterium Acidovorax avenae subsp. avenae RS-1.

    Science.gov (United States)

    Xie, Guan-Lin; Zhang, Guo-Qing; Liu, He; Lou, Miao-Miao; Tian, Wen-Xiao; Li, Bin; Zhou, Xue-Ping; Zhu, Bo; Jin, Gu-Lei

    2011-09-01

    Acidovorax avenae subsp. avenae is a phytobacterium which is the causative agent of several plant diseases with economic significance. Here, we present the draft genome sequence of strain RS-1, which was isolated from rice shoots in a rice field in China. This strain can cause bacterial stripe of rice. Copyright © 2011, American Society for Microbiology. All Rights Reserved.

  8. Genome Sequence of the Rice-Pathogenic Bacterium Acidovorax avenae subsp. avenae RS-1 ▿

    OpenAIRE

    Xie, Guan-Lin; Zhang, Guo-Qing; Liu, He; Lou, Miao-Miao; Tian, Wen-Xiao; Li, Bin; Zhou, Xue-Ping; Zhu, Bo; Jin, Gu-Lei

    2011-01-01

    Acidovorax avenae subsp. avenae is a phytobacterium which is the causative agent of several plant diseases with economic significance. Here, we present the draft genome sequence of strain RS-1, which was isolated from rice shoots in a rice field in China. This strain can cause bacterial stripe of rice.

  9. Genome Sequence of the Rice-Pathogenic Bacterium Acidovorax avenae subsp. avenae RS-1 ▿

    Science.gov (United States)

    Xie, Guan-Lin; Zhang, Guo-Qing; Liu, He; Lou, Miao-Miao; Tian, Wen-Xiao; Li, Bin; Zhou, Xue-Ping; Zhu, Bo; Jin, Gu-Lei

    2011-01-01

    Acidovorax avenae subsp. avenae is a phytobacterium which is the causative agent of several plant diseases with economic significance. Here, we present the draft genome sequence of strain RS-1, which was isolated from rice shoots in a rice field in China. This strain can cause bacterial stripe of rice. PMID:21742879

  10. Physilogical and Biochemical Responses of Avena species to ...

    African Journals Online (AJOL)

    mk

    2013-10-23

    Oct 23, 2013 ... Seven species of oat (Avena) were evaluated for their relative drought tolerance under soil moisture stress. The plant height, leaf area production and biomass yield reduced under soil moisture stress. Among the species tested, minimum reduction in height was recorded in Avena vaviloviana, Avena.

  11. In Vitro and In Vivo Effects of α-Amylase Inhibitor From Avena sativa Seeds on Life History and Physiological Characteristics of Sitotroga cerealella (Lepidoptera: Gelechiidae).

    Science.gov (United States)

    Borzoui, Ehsan; Nouri-Ganbalani, Gadir; Naseri, Bahram

    2017-11-01

    The inhibitory effects of Avena sativa L. seed extract were studied on life history and some physiological aspects of Sitotroga cerealella (Olivier; Lepidoptera: Gelechiidae). The inhibition of α-amylase activity in vitro by A. sativa proteinaceous extract suggested its potential antimetabolic effect on S. cerealella larvae. Although, chronic ingestion of A. sativa inhibitor (I10: 0.108 mg protein/artificial seed) did not show significant reduction of the growth and development of S. cerealella. However, a delay in the developmental time of immature stages was detected when S. cerealella larvae were continuously fed on I30 and I50 concentrations (0.429 and 1.11 mg protein/artificial seed, respectively) of the inhibitor. The highest realized fecundity was recorded for females which came from larvae fed on I10 concentration (102.46 ± 2.50 eggs/female), and the lowest fecundity was observed for females which came from larvae fed on I50 concentration (31.64 ± 3.17 eggs/female). The lightest weight of pupae of S. cerealella was observed on I50 concentration (2.76 ± 0.07 mg). The lowest glycogen and lipid contents of the pupae were detected on I50 concentration (50.00 ± 3.53 and 289.57 ± 29.00 µg/pupa, respectively). The lower survival rate of pupae at low temperature indicated that S. cerealella fed on I50 concentration of the inhibitor was less cold tolerant than control insects. The inhibitory studies indicated that A. sativa proteinaceous extract is a good candidate as an inhibitor of the α-amylase of this pest. This inhibitor can be expressed in genetically engineered plants to confer resistance to S. cerealella. © The Authors 2017. Published by Oxford University Press on behalf of Entomological Society of America.

  12. Identification of powdery mildew resistance genes in Polish common oat (Avena sativa L. cultivars using host-pathogen tests

    Directory of Open Access Journals (Sweden)

    Sylwia Okoń

    2012-10-01

    Full Text Available The aim of the present study was to characterize and identify powdery mildew resistance genes in Polish common oat cultivars using host-pathogen tests. A differential set of six Blumeria graminis f.sp. avenae isolates virulent or avirulent to four cultivars and one line that has known resistance to powdery mildew were used. Among the investigated cultivars, only four of them (13.3% had resistance patterns similar to genotypes belonging to the differential set. The resistance of OMR group 1 was found in the cultivar ‘Dragon’, while that of OMR2 in the cultivar ‘Skrzat’. The cultivars ‘Deresz’ and ‘Hetman’ showed a resistance pattern that corresponded with OMR group 3. The resistance corresponding to OMR4 was not found, which suggests that until now this gene has not been used in Polish oat breeding programmes. The cultivar ‘Canyon’ had a different pat- tern of resistance than the genotypes that have already known OMR genes, which indicates that the resistance of this cultivar is determined by a new gene or a combination of known genes.

  13. INFLUÊNCIA DO CULTIVO CONSORCIADO DE AVEIA PRETA (AVENA STRIGOSA SCHIEB. E ERVILHACA COMUM (VICIA SATIVA L. NA PRODUÇÃO DE FITOMASSA E NO APORTE DE NITROGÊNIO INFLUENCE OF INTERCROPPED COMMON VETCH (VICIA SATIVA L. AND NAKED OAT (AVENA STRIGOSA ON BIOMASS PRODUCTION AND NITROGEN ADDITION

    Directory of Open Access Journals (Sweden)

    R. Heinrichs

    1999-01-01

    Full Text Available Em um Podzólico Vermelho Amarelo e sob preparo convencional, foi avaliada a influência de proporções de sementes de ervilhaca (Vicia sativa L. e de aveia preta (Avena strigosa Schieb. cultivadas em consórcio, na produção de fitomassa e no aporte de nitrogênio no sistema. O experimento foi implantado em solo podzolico vermelho amarelo, de Santa Maria, RS. Os tratamentos foram casualizados em quatro blocos, constituindo-se de: 1- 100% Ervilhaca comum (E; 2- 90% E + 10% Aveia preta (A; 3- 75% E + 25% A; 4- 50% E + 50% A; 5- 25% E + 75% A; 6- 100% A; 7- pousio de inverno. A amostragem da fitomassa das coberturas verdes foi efetuada na ocasião do pleno florescimento em área de 0,8m2 por parcela. Os resultados evidenciaram que a aveia preta e a ervilhaca comum podem ser consorciadas, beneficiando assim, a produção de fitomassa e acúmulo de nitrogênio.The effect of intercropping common vetch (Vicia sativa L. with naked oat (Avena strigosa Schieb. at different seed proportions was evaluated. The trial was set up on a Red Yellow Podzolic soil of Santa Maria, RS, Brazil. The treatments were the following: 1- 100% E (common vetch; 2- 90% E + 10% A (naked oat; 3- 75% E + 25% A; 4- 50% E + 50% A; 5- 25% E + 75% A; 6- 100% A; 7- fall tillage organized in four randomized blocks. Biomass production was evaluated at the flowering stage in an area of 0.8 m2 per plot. Data show that both species can be intercropped which is beneficial to biomass production and nitrogen accumulation.

  14. Comparative cytogenetic analysis of Avena macrostachya and diploid C-genome Avena species.

    Science.gov (United States)

    Badaeva, Ekaterina D; Shelukhina, Olga Yu; Diederichsen, Axel; Loskutov, Igor G; Pukhalskiy, Vitaly A

    2010-02-01

    The chromosome set of Avena macrostachya Balansa ex Coss. et Durieu was analyzed using C-banding and fluorescence in situ hybridization with 5S and 18S-5.8S-26S rRNA gene probes, and the results were compared with the C-genome diploid Avena L. species. The location of major nucleolar organizer regions and 5S rDNA sites on different chromosomes confirmed the affiliation of A. macrostachya with the C-genome group. However, the symmetric karyotype, the absence of "diffuse heterochromatin" and the location of large C-band complexes in proximal chromosome regions pointed to an isolated position of A. macrostachya from other Avena species. Based on the distribution of rDNA loci on the C-genome chromosomes of diploid and polyploid Avena species, we propose a model of the chromosome alterations that occurred during the evolution of oat species.

  15. Preferential recruitment of the maternal centromere-specific histone H3 (CENH3) in oat (Avena sativa L.) × pearl millet (Pennisetum glaucum L.) hybrid embryos.

    Science.gov (United States)

    Ishii, Takayoshi; Sunamura, Naohiro; Matsumoto, Ayaka; Eltayeb, Amin Elsadig; Tsujimoto, Hisashi

    2015-12-01

    Chromosome elimination occurs frequently in interspecific hybrids between distantly related species in Poaceae. However, chromosomes from both parents behave stably in a hybrid of female oat (Avena sativa L.) pollinated by pearl millet (Pennisetum glaucum L.). To analyze the chromosome behavior in this hybrid, we cloned the centromere-specific histone H3 (CENH3) genes of oat and pearl millet and produced a pearl millet-specific anti-CENH3 antibody. Application of this antibody together with a grass species common anti-CENH3 antibody revealed the dynamic CENH3 composition of the hybrid cells before and after fertilization. Despite co-expression of CENH3 genes encoded by oat and pearl millet, only an oat-type CENH3 was incorporated into the centromeres of both species in the hybrid embryo. Oat CENH3 enables a functional centromere in pearl millet chromosomes in an oat genetic background. Comparison of CENH3 genes among Poaceae species that show chromosome elimination in interspecific hybrids revealed that the loop 1 regions of oat and pearl millet CENH3 exhibit exceptionally high similarity.

  16. Effects of water-saving superabsorbent polymer on antioxidant enzyme activities and lipid peroxidation in oat (Avena sativa L.) under drought stress.

    Science.gov (United States)

    Islam, M Robiul; Xue, Xuzhang; Mao, Sishuai; Ren, Changzhong; Eneji, A Egrinya; Hu, Yuegao

    2011-03-15

    Drought stress significantly limits oat (Avena sativa L.) growth and productivity. Thus an efficient management of soil moisture and study of metabolic changes in response to drought are important for improved production of oat. The objective was to gain a better understanding of drought tolerance mechanisms and improve soil water management strategies using water-saving superabsorbent polymer (SAP) at 60 kg ha(-1) under three irrigation levels (adequate, moderate and deficit) using a new type of hydraulic pressure-controlled auto irrigator. The results showed that the relative water content and leaf water potential (ψ(1) ) were much higher in oats treated with SAP. Although the SAP had little effect on plant biomass accumulation under adequate and moderate irrigation, it significantly increased the biomass by 52.7% under deficit irrigation. Plants treated with SAP under deficit irrigation showed a significant decrease in superoxide dismutase, catalase, peroxidase, ascorbate peroxidase and glutathione reductase activities in leaves compared with control plants. Our results suggested that drought stress leads to production of oxygen radicals, which results in increased lipid peroxidation and oxidative stress in the plant, and the application of SAP could conserve soil water, making same available to plants for increased biomass accumulation and reduced oxidative stress especially under severe water stress. Copyright © 2010 Society of Chemical Industry.

  17. The role of calcium in growth induced by indole-3-acetic acid and gravity in the leaf-sheath pulvinus of oat (Avena sativa)

    Science.gov (United States)

    Brock, T. G.; Burg, J.; Ghosheh, N. S.; Kaufman, P. B.

    1992-01-01

    Leaf-sheath pulvini of excised segments from oat (Avena sativa L.) were induced to grow by treatment with 10 micromoles indole-3-acetic acid (IAA), gravistimulation, or both, and the effects of calcium, EGTA, and calcium channel blockers on growth were evaluated. Unilaterally applied calcium (10 mM CaCl2) significantly inhibited IAA-induced growth in upright pulvini but had no effect on growth induced by either gravity or gravity plus IAA. Calcium alone had no effect on upright pulvini. The calcium chelator EGTA alone (10 mM) stimulated growth in upright pulvini. However, EGTA had no effect on either IAA- or gravity-induced growth but slightly diminished growth in IAA-treated gravistimulated pulvini. The calcium channel blockers lanthanum chloride (25 mM), verapamil (2.5 mM), and nifedipine (2.5 mM) greatly inhibited growth as induced by IAA (> or = 50% inhibition) or IAA plus gravity (20% inhibition) but had no effect on gravistimulated pulvini. Combinations of channel blockers were similar in effect on IAA action as individual blockers. Since neither calcium ions nor EGTA significantly affected the graviresponse of pulvini, we conclude that apoplastic calcium is unimportant in leaf-sheath pulvinus gravitropism. The observation that calcium ions and calcium channel blockers inhibit IAA-induced growth, but have no effect on gravistimulated pulvini, further supports previous observations that gravistimulation alters the responsiveness of pulvini to IAA.

  18. Effects of intercropping of oat (Avena sativa L.) with white lupin (Lupinus albus L.) on the mobility of target elements for phytoremediation and phytomining in soil solution.

    Science.gov (United States)

    Wiche, Oliver; Székely, Balazs; Kummer, Nicolai-Alexeji; Moschner, Christin; Heilmeier, Hermann

    2016-09-01

    This study aims to investigate how intercropping of oat (Avena sativa L.) with white lupin (Lupinus albus L.) affects the mobile fractions of trace metals (Fe, Mn, Pb, Cd, Th, U, Sc, La, Nd, Ge) in soil solution. Oat and white lupin were cultivated in monocultures and mixed cultures with differing oat/white lupin ratios (11% and 33% lupin, respectively). Temporal variation of soil solution chemistry was compared with the mobilization of elements in the rhizosphere of white lupin and concentrations in plant tissues. Relative to the monocrops, intercropping of oat with 11% white lupin significantly increased the concentrations of Fe, Pb, Th, La and Nd in soil solution as well as the concentrations of Fe, Pb, Th, Sc, La and Nd in tissues of oat. Enhanced mobility of the mentioned elements corresponded to a depletion of elements in the rhizosphere soil of white lupin. In mixed cultures with 33% lupin, concentrations in soil solution only slightly increased. We conclude that intercropping with 11% white lupin might be a promising tool for phytoremediation and phytomining research enhancing mobility of essential trace metals as well as elements with relevance for phytoremediation (Pb, Th) and phytomining (La, Nd, Sc) in soil.

  19. Anti-inflammatory activities of colloidal oatmeal (Avena sativa) contribute to the effectiveness of oats in treatment of itch associated with dry, irritated skin.

    Science.gov (United States)

    Reynertson, Kurt A; Garay, Michelle; Nebus, Judith; Chon, Suhyoun; Kaur, Simarna; Mahmood, Khalid; Kizoulis, Menas; Southall, Michael D

    2015-01-01

    Oat (Avena sativa) in colloidal form is a centuries-old topical treatment for a variety of skin conditions, including skin rashes, erythema, burns, itch, and eczema; however, few studies have investigated the exact mechanism of action for the anti-inflammatory activity of colloidal oatmeal. Four extracts of colloidal oatmeal were made with various solvents and tested in anti-inflammatory and antioxidant assays. In addition, an investigator blind study was performed with twenty-nine healthy female subjects who exhibited bilateral mild to moderate itch with moderate to severe dry skin on their lower legs. Subjects were treated with a colloidal oatmeal skin protectant lotion. Extracts of colloidal oatmeal diminished pro-inflammatory cytokines in vitro and the colloidal oat skin protectant lotion showed significant clinical improvements in skin dryness, scaling, roughness, and itch intensity. These results demonstrate that colloidal oat extracts exhibit direct anti-oxidant and anti-inflammatory activities, which may provide the mechanisms for observed dermatological benefits while using the colloidal oatmeal skin protectant lotion.

  20. Pro-apoptotic properties of (1,3)(1,4)-β-D-glucan from Avena sativa on human melanoma HTB-140 cells in vitro.

    Science.gov (United States)

    Parzonko, Andrzej; Makarewicz-Wujec, Magdalena; Jaszewska, Edyta; Harasym, Joanna; Kozłowska-Wojciechowska, Małgorzata

    2015-01-01

    In this study, the growth-inhibitory effect of polysaccharide (1,3)(1,4)-β-D-glucan from oat, Avena sativa L. grains was explored on the human skin melanoma HTB-140 cells in vitro. The oat β-D-glucan (OBG) exerted cytotoxic action on HTB-140 cells. After 24h of incubation, LD50 (concentration at which 50% of the cells were found dead) was obtained of 194.6 ± 9.8 μg/mL. The oat β-D-glucan caused a concentration-dependent increase of caspase-3/-7 activation and appearance of phosphatidylserine on the external surface of cellular membranes where it was bound to annexin V-FITC, demonstrating the induction of apoptosis. Intracellular ATP level decreased along with the mitochondrial potential, which suggested a mitochondrial pathway of apoptosis. A cell cycle analysis showed increase in the number of apoptotic cells, increase in the number of cells in G1 phase and decrease in the number of cells in G2/M. Although the detailed mechanism for the anti-tumor activity of the oat β-D-glucan still needs further investigation, this study provides preliminary insights into this direction along with perspectives of developing it as an anti-tumor agent. Copyright © 2014 Elsevier B.V. All rights reserved.

  1. Hormonal and gravitropic specificity in the regulation of growth and cell wall synthesis in pulvini and internodes from shoots of Avena sativa L. (oat).

    Science.gov (United States)

    Montague, M J

    1995-01-01

    Segments can be cut from the peduncular-1 internode of oat (Avena sativa L.) shoots so as to contain the graviresponsive leaf-sheath pulvinus and gibberellin-sensitive internodal tissue. Incorporation of [14C]glucose was used to monitor cell wall synthesis in these two tissues as affected by gravistimulus, indoleacetic acid (IAA), gibberellic acid (GA3), and fusicoccin (FC). Pulvinar cell wall synthesis was promoted by IAA and FC (both within about 1 h), as well as by gravistimulus (starting between 3 and 6 h), whereas GA3 had no effect on nongravistimulated pulvini. In contrast, GA3 and FC promoted internodal cell wall synthesis (initiated between 1 and 2 h), whereas IAA and gravistimulus caused a decrease in internodal uptake. FC preferentially promoted incorporation into the matrix component of the wall in both tissues. Gravistimulus failed to increase responsiveness of pulvinar tissue to IAA, whereas GA3 partially overcame gravistimulus-promoted incorporation into pulvinar cell wall, probably because of preferential movement of label into the rapidly elongating internode. The results demonstrate that these eight stimulus/tissue combinations can be examined easily in an isolated 10-mm stem segment, providing new opportunities for the comparative study of tissue- and stimulus-specific events in gene regulation and signal transduction in agronomically important cereals. PMID:11536686

  2. A metabolomic study in oats (Avena sativa) highlights a drought tolerance mechanism based upon salicylate signalling pathways and the modulation of carbon, antioxidant and photo-oxidative metabolism.

    Science.gov (United States)

    Sánchez-Martín, Javier; Heald, Jim; Kingston-Smith, Alison; Winters, Ana; Rubiales, Diego; Sanz, Mariluz; Mur, Luis A J; Prats, Elena

    2015-07-01

    Although a wealth of information is available on the induction of one or several drought-related responses in different species, little is known of how their timing, modulation and crucially integration influence drought tolerance. Based upon metabolomic changes in oat (Avena sativa L.), we have defined key processes involved in drought tolerance. During a time course of increasing water deficit, metabolites from leaf samples were profiled using direct infusion-electrospray mass spectroscopy (DI-ESI-MS) and high-performance liquid chromatography (HPLC) ESI-MS/MS and analysed using principal component analysis (PCA) and discriminant function analysis (DFA). The involvement of metabolite pathways was confirmed through targeted assays of key metabolites and physiological experiments. We demonstrate an early accumulation of salicylic acid (SA) influencing stomatal opening, photorespiration and antioxidant defences before any change in the relative water content. These changes are likely to maintain plant water status, with any photoinhibitory effect being counteracted by an efficient antioxidant capacity, thereby representing an integrated mechanism of drought tolerance in oats. We also discuss these changes in relation to those engaged at later points, consequence of the different water status in susceptible and resistant genotypes. © 2014 John Wiley & Sons Ltd.

  3. Unraveling the evolutionary dynamics of ancient and recent polypoidization events in Avena (Poaceae).

    Science.gov (United States)

    Liu, Qing; Lin, Lei; Zhou, Xiangying; Peterson, Paul M; Wen, Jun

    2017-02-03

    Understanding the diversification of polyploid crops in the circum-Mediterranean region is a challenging issue in evolutionary biology. Sequence data of three nuclear genes and three plastid DNA fragments from 109 accessions of Avena L. (Poaceae) and the outgroups were used for maximum likelihood and Bayesian analyses. The evolution of cultivated oat (Avena sativa L.) and its close relatives was inferred to have involved ancient allotetraploidy and subsequent recent allohexaploidy events. The crown ages of two infrageneric lineages (Avena sect. Ventricosa Baum ex Romero-Zarco and Avena sect. Avena) were estimated to be in the early to middle Miocene, and the A. sativa lineages were dated to the late Miocene to Pliocene. These periods coincided with the mild seasonal climatic contrasts and the Mediterranean climate established in the Mediterranean Basin. Our results suggest that polyploidy, lineage divergence, and complex reticulate evolution have occurred in Avena, exemplifying the long-term persistence of tetraploids and the multiple origins of hexaploids related to paleoclimatic oscillations during the Miocene-Pliocene interval in the circum-Mediterranean region. This newly-resolved infrageneric phylogenetic framework represents a major step forward in understanding the origin of the cultivated oat.

  4. 45S rDNA external transcribed spacer organization reveals new phylogenetic relationships in Avena genus.

    Science.gov (United States)

    Rodrigues, Joana; Viegas, Wanda; Silva, Manuela

    2017-01-01

    The genus Avena comprises four distinct genomes organized in diploid (AA or CC), tetraploid (AABB or AACC) and hexaploid species (AACCDD), constituting an interesting model for phylogenetic analysis. The aim of this work was to characterize 45S rDNA intergenic spacer (IGS) variability in distinct species representative of Avena genome diversity-A. strigosa (AA), A. ventricosa (CvCv), A. eriantha (CpCp), A. barbata (AABB), A. murphyi (AACC), A. sativa (AACCDD) and A. sterilis (AACCDD) through the assessment of the 5' external transcribed spacer (5'-ETS), a promising IGS region for phylogenetic studies poorly studied in Avena genus. In this work, IGS length polymorphisms were detected mainly due to distinct 5'-ETS sequence types resulting from major differences in the number and organization of repeated motifs. Although species with A genome revealed a 5'-ETS organization (A-organization) similar to the one previously described in A. sativa, a distinct organization was unraveled in C genome diploid species (C-organization). Interestingly, such new organization presents a higher similarity with other Poaceae species than A-genome sequences, supporting the hypothesis of C-genome being the ancestral Avena genome. Additionally, polyploid species with both genomes mainly retain the A-genome 5'-ETS organization, confirming the preferential elimination of C-genome sequences in Avena polyploid species. Moreover, 5'-ETS sequences phylogenetic analysis consistently clustered the species studied according to ploidy and genomic constitution supporting the use of ribosomal genes to highlight Avena species evolutive pathways.

  5. Oat (Avena sativa) seed extract as an antifungal food preservative through the catalytic activity of a highly abundant class I chitinase.

    Science.gov (United States)

    Sørensen, Hans Peter; Madsen, Lone Søvad; Petersen, Jørgen; Andersen, Jesper Tapdrup; Hansen, Anne Maria; Beck, Hans Christian

    2010-03-01

    Extracts from different higher plants were screened for the ability to inhibit the growth of Penicillium roqueforti, a major contaminating species in industrial food processing. Oat (Avena sativa) seed extracts exhibited a high degree of antifungal activity and could be used directly on rye bread to prevent the formation of P. roqueforti colonies. Proteins in the oat seed extracts were fractionated by column chromatography and proteins in fractions containing antifungal activity were identified by liquid chromatography-tandem mass spectrometry (LC-MS/MS) and database searches. Identified antifungal candidates included thaumatin-like proteins, 1,3-beta-glucanase, permatin precursor, pathogenesis-related protein type 1, and chitinases of class I and II. Class I chitinase could be specifically removed from the extracts and was found to be indispensable for 50% of the P. roqueforti inhibiting activity. The purified class I chitinase has a molecular weight of approximately 34 kDa, optimal chitinase activity at pH 7, and exists as at least two basic isoforms (pI values of 7.6 and 8.0). Partial sequencing of the class I chitinase isoforms by LC-MS/MS revealed a primary structure with high similarity to class I chitinases of wheat (Triticum aestivum), barley (Hordeum vulgare), and rye (Secale cereale). Oat, wheat, barley, and rye seed extracts were compared with respect to the abundance of the class I chitinase and decrease in antifungal activity when class I chitinase is removed. We found that the oat seed class I chitinase is at least ten times more abundant than the wheat, barley, and rye homologs and that oat seed extracts are highly active toward P. roqueforti as opposed to extracts of other cereal seeds.

  6. The impact of oat (Avena sativa) consumption on biomarkers of renal function in patients with chronic kidney disease: A parallel randomized clinical trial.

    Science.gov (United States)

    Rouhani, Mohammad Hossein; Mortazavi Najafabadi, Mojgan; Surkan, Pamela J; Esmaillzadeh, Ahmad; Feizi, Awat; Azadbakht, Leila

    2018-02-01

    Animal studies report that oat (Avena sativa L) intake has favorable effects on kidney function. However, the effects of oat consumption have not been assessed in humans. The aim of this study was to examine the impact of oat intake on biomarkers of renal function in patients with chronic kidney disease (CKD). Fifty-two patients with CKD were randomly assigned to a control group (recommended to reduce intake of dietary protein, phosphorus, sodium and potassium) or an oat consumption group (given nutritional recommendations for controls +50 g/day oats). Blood urea nitrogen (BUN), serum creatinine (SCr), urine creatinine, serum albumin, serum potassium, parathyroid hormone (PTH), serum klotho and urine protein concentration were measured at baseline and after an eight-week intervention. Creatinine clearance was calculated using urine creatinine concentration. Within group analysis showed a significant increase in BUN (P = 0.02) and serum potassium (P = 0.01) and a marginally significant increment in SCr (P = 0.08) among controls. However, changes in the oat group were not significant. In a multivariate adjusted model, we observed a significant difference in change of serum potassium (-0.03 mEq/L for oat group and 0.13 mEq/L for control group; P = 0.01) and a marginally significant difference in change of serum albumin (0.01 g/dl for oat group and -0.08 for control group; P = 0.08) between the two groups. There was no change in PTH concentration. Intake of oats may have a beneficial effect on serum albumin and serum potassium in patients with CKD. Present study registered under IRCT.ir identifier no. IRCT2015050414551N2. Copyright © 2016 Elsevier Ltd and European Society for Clinical Nutrition and Metabolism. All rights reserved.

  7. Genome size variation in the genus Avena.

    Science.gov (United States)

    Yan, Honghai; Martin, Sara L; Bekele, Wubishet A; Latta, Robert G; Diederichsen, Axel; Peng, Yuanying; Tinker, Nicholas A

    2016-03-01

    Genome size is an indicator of evolutionary distance and a metric for genome characterization. Here, we report accurate estimates of genome size in 99 accessions from 26 species of Avena. We demonstrate that the average genome size of C genome diploid species (2C = 10.26 pg) is 15% larger than that of A genome species (2C = 8.95 pg), and that this difference likely accounts for a progression of size among tetraploid species, where AB Avena have experienced genome downsizing in relation to their diploid progenitors. Genome size measurements could provide additional quality control for species identification in germplasm collections, especially in cases where diploid and polyploid species have similar morphology.

  8. Membrane protein profiling of Acidovorax avenae subsp. avenae under various growth conditions.

    Science.gov (United States)

    Li, Bin; Wang, Li; Ibrahim, Muhammad; Ge, Mengyu; Wang, Yanli; Mannan, Shazia; Asif, Muhammad; Sun, Guochang

    2015-06-01

    Membrane proteins (MPs) of plant pathogenic bacteria have been reported to be able to regulate many essential cellular processes associated with plant disease. The aim of the current study was to examine and compare the expression of MPs of the rice bacterial pathogen Acidovorax avenae subsp. avenae strain RS-1 under Luria-Bertani (LB) medium, M9 medium, in vivo rice plant conditions and leaf extract (LE) medium mimicking in vivo plant condition. Proteomic analysis identified 95, 72, 75, and 87 MPs under LB, in vivo, M9 and LE conditions, respectively. Among them, six proteins were shared under all tested growth conditions designated as abundant class of proteins. Twenty-six and 21 proteins were expressed uniquely under in vivo versus LB medium and LE versus M9 medium, respectively, with 17 proteins common among these uniquely induced proteins. Moreover, most of the shared proteins are mainly related to energy metabolism, transport of small molecules, protein synthesis and secretion as well as virulence such as NADH, OmpA, secretion proteins. Therefore, the result of this study not only suggests that it may be an alternate method to analyze the in vivo expression of proteins by using LE medium to mimic plant conditions, but also reveals that the two sets of differentially expressed MPs, in particular the common MPs between them, might be important in energy metabolism, stress response and virulence of A. avenae subsp. avenae strain RS-1.

  9. A new chromosome nomenclature system for oat (Avena sativa L. and A. byzantina C. Koch) based on FISH analysis of monosomic lines.

    Science.gov (United States)

    Sanz, M J; Jellen, E N; Loarce, Y; Irigoyen, M L; Ferrer, E; Fominaya, A

    2010-11-01

    Fluorescent in situ hybridization (FISH) with multiple probes was used to analyze mitotic and meiotic chromosome spreads of Avena sativa cv 'Sun II' monosomic lines, and of A. byzantina cv 'Kanota' monosomic lines from spontaneous haploids. The probes used were A. strigosa pAs120a (a repetitive sequence abundant in A-genome chromatin), A. murphyi pAm1 (a repetitive sequence abundant in C-genome chromatin), A. strigosa pITS (internal transcribed spacer of rDNA) and the wheat rDNA probes pTa71 (nucleolus organizer region or NOR) and pTa794 (5S). Simultaneous and sequential FISH employing pairs of these probes allowed the identification and genome assignation of all chromosomes. FISH mapping using mitotic and meiotic metaphases facilitated the genomic and chromosomal identification of the monosome in each line. Of the 17 'Sun II' lines analyzed, 13 distinct monosomic lines were found, corresponding to four monosomes of the A-genome, five of the C-genome and four of the D-genome. In addition, 12 distinct monosomic lines were detected among the 20 'Kanota' lines examined, corresponding to six monosomes of the A-genome, three of the C-genome and three of the D-genome. The results show that 19 chromosomes out of 21 of the complement are represented by monosomes between the two genetic backgrounds. The identity of the remaining chromosomes can be deduced either from one intergenomic translocation detected on both 'Sun II' and 'Kanota' lines, or from the single reciprocal, intergenomic translocation detected among the 'Sun II' lines. These results permit a new system to be proposed for numbering the 21 chromosome pairs of the hexaploid oat complement. Accordingly, the A-genome contains chromosomes 8A, 11A, 13A, 15A, 16A, 17A and 19A; the C-genome contains chromosomes 1C, 2C, 3C, 4C, 5C, 6C and 7C; and the D-genome consists of chromosomes 9D, 10D, 12D, 14D, 18D, 20D and 21D. Moreover, the FISH patterns of 16 chromosomes in 'Sun II' and 15 in 'Kanota' suggest that these

  10. AFLP variation in 25 Avena species.

    Science.gov (United States)

    Fu, Yong-Bi; Williams, David J

    2008-08-01

    Current molecular characterization of ex situ plant germplasm has placed more emphasis on cultivated gene pools and less on exotic gene pools representing wild relative species. This study attempted to characterize a selected set of germplasm accessions representing various Avena species with the hope to establish a reference set of exotic oat germplasm for oat breeding and research. The amplified fragment length polymorphism (AFLP) technique was applied to screen 163 accessions of 25 Avena species with diverse geographic origins. For each accession, 413 AFLP polymorphic bands detected by five AFLP primer pairs were scored. The frequencies of polymorphic bands ranged from 0.006 to 0.994 and averaged 0.468. Analysis of molecular variance revealed 59.5% of the total AFLP variation resided among 25 oat species, 45.9% among six assessed sections of the genus, 36.1% among three existing ploidy levels, and 50.8% among eight defined genome types. All the species were clustered together according to their ploidy levels. The C genome diploids appeared to be the most distinct, followed by the Ac genome diploid A. canariensis. The Ac genome seemed to be the oldest in all the A genomes, followed by the As, Al and Ad genomes. The AC genome tetraploids were more related to the ACD genome hexaploids than the AB genome tetraploids. Analysis of AFLP similarity suggested that the AC genome tetraploid A. maroccana was likely derived from the Cp genome diploid A. eriantha and the As genome diploid A. wiestii, and might be the progenitor of the ACD genome hexaploids. These AFLP patterns are significant for our understanding of the evolutionary pathways of Avena species and genomes, for establishing reference sets of exotic oat germplasm, and for exploring new exotic sources of genes for oat improvement.

  11. Recent research on inherent molecular structure, physiochemical properties, and bio-functions of food and feed-type Avena sativa oats and processing-induced changes revealed with molecular microspectroscopic techniques

    Energy Technology Data Exchange (ETDEWEB)

    Prates, Luciana Louzada [Department of Animal and Poultry Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan, Canada; Yu, Peiqiang [Department of Animal and Poultry Science, College of Agriculture and Bioresources, University of Saskatchewan, Saskatoon, Saskatchewan, Canada

    2017-05-16

    Avena sativa oat is a cereal widely used as human food and livestock feed. However, the low metabolized energy and the rapid rumen degradations of protein and starch have limited the use of A. sativa oat grains. To overcome this disadvantage, new A. sativa oat varieties have been developed. Additionally, heat-related processing has been performed to decrease the degradation rate and improve the absorption of amino acids in the small intestine. The nutritive value is reflected by both chemical composition and inherent molecular structure conformation. However, the traditional wet chemical analysis is not able to detect the inherent molecular structures within an intact tissue. The advanced synchrotron-radiation and globar-based molecular microspectroscopy have been developed recently and applied to study internal molecular structures and the processing induced structure changes in A. sativa oats and reveal how molecular structure changes in relation to nutrient availability. This review aimed to obtain the recent information regarding physiochemical properties, molecular structures, metabolic characteristics of protein, and the heat-induced changes in new A. sativa oat varieties. The use of the advanced vibrational molecular spectroscopy was emphasized, synchrotron- and globar-based (micro)spectroscopy, to reveal the inherent structure of A. sativa oats at cellular and molecular levels and to reveal the heat processing effect on the degradation characteristics and the protein molecular structure in A. sativa oats. The relationship between nutrient availability and protein molecular inherent structure was also presented. Information described in this review gives better insight in the physiochemical properties, molecular structure, and the heat-induced changes in A. sativa oat detected with advanced molecular spectroscopic techniques in combinination with conventional nutrition study techniques.

  12. Prévalence de Acidovorax avenae subsp. avenae, agent des rayures bactériennes du riz dans les semences de base produites au Burkina Faso

    OpenAIRE

    Dakouo, D.; Ouedraogo, SL.; Somda, I.; Mortensen, CN.

    2005-01-01

    Prevalence of Bacterial Stripe Organism, Acidovorax avenae subsp. avenae, in Breeder Rice Seed Samples from Burkina Faso. Nine rice seed samples of improved and local varieties were tested at DGISP (Denmark) for the incidence of seed-borne bacterial stripe organism, Acidovorax avenae subsp. avenae, using the cassette holder method. Twenty-six suspected bacterial colonies were identified by different methods including colony morphology, pigmentation, biochemical and pathogenicity tests. Using ...

  13. Role of Ca++ in Shoot Gravitropism. [avena

    Science.gov (United States)

    Rayle, D. L.

    1985-01-01

    A cornerstone in the argument that Ca(2+) levels may regulate growth is the finding the EGTA promotes straight growth. The usual explanation for these results is that Ca(2+) chelation from cell walls results in wall loosening and thus accelerated straight growth. The ability of frozen-thawed Avena coleoptile tissue (subjected to 15g tension) to extend in response to EGTA and Quin II was examined. The EGTA when applied in weakly buffered (i.e., 0.1mM) neutral solutions initiates rapid extension. When the buffer strength is increased, similar concentrations of EGTA produce no growth response. This implies when EGTA liberated protons are released upon Ca(2+) chelation they can either initiate acid growth (low buffer conditions) or if consumed (high buffer conditions) have no effect. Thus Ca(2+) chelation in itself apparently does not result in straight growth.

  14. New insights into virulence mechanisms of rice pathogen Acidovorax avenae subsp. avenae strain RS-1 following exposure to ?-lactam antibiotics

    OpenAIRE

    Li, Bin; Ge, Mengyu; Zhang, Yang; Wang, Li; Ibrahim, Muhammad; Wang, Yanli; Sun, Guochang; Chen, Gongyou

    2016-01-01

    Recent research has shown that pathogen virulence can be altered by exposure to antibiotics, even when the growth rate is unaffected. Investigating this phenomenon provides new insights into understanding the virulence mechanisms of bacterial pathogens. This study investigates the phenotypic and transcriptomic responses of the rice pathogenic bacterium Acidovorax avenae subsp. avenae (Aaa) strain RS-1 to ?-lactam antibiotics especially Ampicillin (Amp). Our results indicate that exposure to A...

  15. Transcriptome analysis of Acidovorax avenae subsp. avenae cultivated in vivo and co-culture with Burkholderia seminalis

    OpenAIRE

    Bin Li; Muhammad Ibrahim; Mengyu Ge; Zhouqi Cui; Guochang Sun; Fei Xu; Michael Kube

    2014-01-01

    Response of bacterial pathogen to environmental bacteria and its host is critical for understanding of microbial adaption and pathogenesis. Here, we used RNA-Seq to comprehensively and quantitatively assess the transcriptional response of Acidovorax avenae subsp. avenae strain RS-1 cultivated in vitro, in vivo and in co-culture with rice rhizobacterium Burkholderia seminalis R456. Results revealed a slight response to other bacteria, but a strong response to host. In particular, a large numbe...

  16. New Diversity Arrays Technology (DArT) markers for tetraploid oat (Avena magna Murphy et Terrell) provide the first complete oat linkage map and markers linked to domestication genes from hexaploid A. sativa L.

    Science.gov (United States)

    Oliver, R E; Jellen, E N; Ladizinsky, G; Korol, A B; Kilian, A; Beard, J L; Dumlupinar, Z; Wisniewski-Morehead, N H; Svedin, E; Coon, M; Redman, R R; Maughan, P J; Obert, D E; Jackson, E W

    2011-11-01

    Nutritional benefits of cultivated oat (Avena sativa L., 2n = 6x = 42, AACCDD) are well recognized; however, seed protein levels are modest and resources for genetic improvement are scarce. The wild tetraploid, A. magna Murphy et Terrell (syn A. maroccana Gdgr., 2n = 4x = 28, CCDD), which contains approximately 31% seed protein, was hybridized with cultivated oat to produce a domesticated A. magna. Wild and cultivated accessions were crossed to generate a recombinant inbred line (RIL) population. Although these materials could be used to develop domesticated, high-protein oat, mapping and quantitative trait loci introgression is hindered by a near absence of genetic markers. Objectives of this study were to develop high-throughput, A. magna-specific markers; generate a genetic linkage map based on the A. magna RIL population; and map genes controlling oat domestication. A Diversity Arrays Technology (DArT) array derived from 10 A. magna genotypes was used to generate 2,688 genome-specific probes. These, with 12,672 additional oat clones, produced 2,349 polymorphic markers, including 498 (21.2%) from A. magna arrays and 1,851 (78.8%) from other Avena libraries. Linkage analysis included 974 DArT markers, 26 microsatellites, 13 SNPs, and 4 phenotypic markers, and resulted in a 14-linkage-group map. Marker-to-marker correlation coefficient analysis allowed classification of shared markers as unique or redundant, and putative linkage-group-to-genome anchoring. Results of this study provide for the first time a collection of high-throughput tetraploid oat markers and a comprehensive map of the genome, providing insights to the genome ancestry of oat and affording a resource for study of oat domestication, gene transfer, and comparative genomics.

  17. Cereal Cyst Nematode (Heterodera avenae) on Oats. II. Early Root Development and Nematode Tolerance

    OpenAIRE

    Volkmar, K. M.

    1989-01-01

    The effect of Heterodera avenae infestation on early seminal and lateral root growth was examined in four oat genotypes differing in tolerance to H. avenae. Recently emerged seminal roots were inoculated with a range of H. avenae larval densities, then transferred a hydroponic system to remove the effect of later nematode penetration on root development. Intolerance to H. avenae was assessed in terms of impairment of seminal root extension resulting in fewer primary lateral roots emerging fro...

  18. Dissimilaridade genética em mutantes de aveia tolerantes e sensíveis a ácidos orgânicos Genetic dissimilarity (Avena Sativa L. tolerant and sensitive mutants to organic acids

    Directory of Open Access Journals (Sweden)

    Velci Queiroz de Souza

    2005-01-01

    Full Text Available Para que o cultivo da aveia (Avena sativa L. seja também alternativa economicamente viável em solos de várzea, faz-se necessário a utilização de cultivares tolerantes aos principais ácidos orgânicos produzidos pela decomposição da matéria orgânica gerada em cultivos com plantio direto. Este trabalho objetivou determinar a dissimilaridade genética entre famílias mutantes M3 e a cultivar UFRGS 14 de aveia mediante a utilização de marcadores ISSR, e detectar regiões genômicas associadas ao caráter tolerância a ácidos orgânicos. Foram avaliadas 30 famílias mutantes (M3, pertencentes ao banco de mutantes de aveia do Centro de Genômica e Fitomelhoramento da Faculdade de Agronomia "Eliseu Maciel". As famílias estudadas foram originadas da cultivar UFRGS 14 irradiada com raios gama (Co60 na dose de 400 Gy. A caracterização genética foi realizada utilizando-se a técnica de marcadores ISSR. Pelos resultados verifica-se que os oligonucleotídeos UBC 854, 855, e 811 permitiram detectar regiões genômicas relacionadas à tolerância à toxicidade por ácidos orgânicos, enquanto os oligonucleotídeos UBC 850 e 826 possibilitaram identificar regiões genômicas associadas à sensibilidade.In order to cultivate oats (Avena sativa L. as an economically alternative in low lands, it is necessary to use cultivars tolerant to the main organic acids produced by organic matter decomposition resulting from no tillage systems. The objectives of this work were estimate genetic dissimilarity among m3 mutant families and the oat cultivar UFRGS 14 using ISSR markers; and to detect genomic regions associated with organic acids toxicity. Thirty M3 mutant families from the Plant Genomic Center of the College of Agronomy "Eliseu Maciel", derived from the cultivar UFRGS 14 irradiated with gamma ray (Co60 at 400 Gy dosage were used. The genetic characterization was carried out using the ISSR marker technique. The results indicated that UBC 854, 855

  19. Inhibitory Effect of Camptothecin against Rice Bacterial Brown Stripe Pathogen Acidovorax avenae subsp. avenae RS-2.

    Science.gov (United States)

    Dong, Qiaolin; Luo, Ju; Qiu, Wen; Cai, Li; Anjum, Syed Ishtiaq; Li, Bin; Hou, Mingsheng; Xie, Guanlin; Sun, Guochang

    2016-07-27

    Camptothecin (CPT) has anticancer, antiviral, and antifungal properties. However, there is a dearth of information about antibacterial activity of CPT. Therefore, in this study, we investigated the inhibitory effect of CPT on Acidovorax avenae subsp. avenae strain RS-2, the pathogen of rice bacterial brown stripe, by measuring cell growth, DNA damage, cell membrane integrity, the expression of secretion systems, and topoisomerase-related genes, as well as the secretion of effector protein Hcp. Results indicated that CPT solutions at 0.05, 0.25, and 0.50 mg/mL inhibited the growth of strain RS-2 in vitro, while the inhibitory efficiency increased with an increase in CPT concentration, pH, and incubation time. Furthermore, CPT treatment affected bacterial growth and replication by causing membrane damage, which was evidenced by transmission electron microscopic observation and live/dead cell staining. In addition, quantitative real-time PCR analysis indicated that CPT treatment caused differential expression of eight secretion system-related genes and one topoisomerase-related gene, while the up-regulated expression of hcp could be justified by the increased secretion of Hcp based on the ELISA test. Overall, this study indicated that CPT has the potential to control the bacterial brown stripe pathogen of rice.

  20. Sugarcane transcriptome analysis in response to infection caused by Acidovorax avenae subsp. avenae.

    Directory of Open Access Journals (Sweden)

    Ailton B Santa Brigida

    Full Text Available Sugarcane is an important tropical crop mainly cultivated to produce ethanol and sugar. Crop productivity is negatively affected by Acidovorax avenae subsp avenae (Aaa, which causes the red stripe disease. Little is known about the molecular mechanisms triggered in response to the infection. We have investigated the molecular mechanism activated in sugarcane using a RNA-seq approach. We have produced a de novo transcriptome assembly (TR7 from sugarcane RNA-seq libraries submitted to drought and infection with Aaa. Together, these libraries present 247 million of raw reads and resulted in 168,767 reference transcripts. Mapping in TR7 of reads obtained from infected libraries, revealed 798 differentially expressed transcripts, of which 723 were annotated, corresponding to 467 genes. GO and KEGG enrichment analysis showed that several metabolic pathways, such as code for proteins response to stress, metabolism of carbohydrates, processes of transcription and translation of proteins, amino acid metabolism and biosynthesis of secondary metabolites were significantly regulated in sugarcane. Differential analysis revealed that genes in the biosynthetic pathways of ET and JA PRRs, oxidative burst genes, NBS-LRR genes, cell wall fortification genes, SAR induced genes and pathogenesis-related genes (PR were upregulated. In addition, 20 genes were validated by RT-qPCR. Together, these data contribute to a better understanding of the molecular mechanisms triggered by the Aaa in sugarcane and opens the opportunity for the development of molecular markers associated with disease tolerance in breeding programs.

  1. Inhibitory Effect of Camptothecin against Rice Bacterial Brown Stripe Pathogen Acidovorax avenae subsp. avenae RS-2

    Directory of Open Access Journals (Sweden)

    Qiaolin Dong

    2016-07-01

    Full Text Available Camptothecin (CPT has anticancer, antiviral, and antifungal properties. However, there is a dearth of information about antibacterial activity of CPT. Therefore, in this study, we investigated the inhibitory effect of CPT on Acidovorax avenae subsp. avenae strain RS-2, the pathogen of rice bacterial brown stripe, by measuring cell growth, DNA damage, cell membrane integrity, the expression of secretion systems, and topoisomerase-related genes, as well as the secretion of effector protein Hcp. Results indicated that CPT solutions at 0.05, 0.25, and 0.50 mg/mL inhibited the growth of strain RS-2 in vitro, while the inhibitory efficiency increased with an increase in CPT concentration, pH, and incubation time. Furthermore, CPT treatment affected bacterial growth and replication by causing membrane damage, which was evidenced by transmission electron microscopic observation and live/dead cell staining. In addition, quantitative real-time PCR analysis indicated that CPT treatment caused differential expression of eight secretion system-related genes and one topoisomerase-related gene, while the up-regulated expression of hcp could be justified by the increased secretion of Hcp based on the ELISA test. Overall, this study indicated that CPT has the potential to control the bacterial brown stripe pathogen of rice.

  2. Sugarcane transcriptome analysis in response to infection caused by Acidovorax avenae subsp. avenae.

    Science.gov (United States)

    Santa Brigida, Ailton B; Rojas, Cristian A; Grativol, Clícia; de Armas, Elvismary M; Entenza, Júlio O P; Thiebaut, Flávia; Lima, Marcelo de F; Farrinelli, Laurent; Hemerly, Adriana S; Lifschitz, Sérgio; Ferreira, Paulo C G

    2016-01-01

    Sugarcane is an important tropical crop mainly cultivated to produce ethanol and sugar. Crop productivity is negatively affected by Acidovorax avenae subsp avenae (Aaa), which causes the red stripe disease. Little is known about the molecular mechanisms triggered in response to the infection. We have investigated the molecular mechanism activated in sugarcane using a RNA-seq approach. We have produced a de novo transcriptome assembly (TR7) from sugarcane RNA-seq libraries submitted to drought and infection with Aaa. Together, these libraries present 247 million of raw reads and resulted in 168,767 reference transcripts. Mapping in TR7 of reads obtained from infected libraries, revealed 798 differentially expressed transcripts, of which 723 were annotated, corresponding to 467 genes. GO and KEGG enrichment analysis showed that several metabolic pathways, such as code for proteins response to stress, metabolism of carbohydrates, processes of transcription and translation of proteins, amino acid metabolism and biosynthesis of secondary metabolites were significantly regulated in sugarcane. Differential analysis revealed that genes in the biosynthetic pathways of ET and JA PRRs, oxidative burst genes, NBS-LRR genes, cell wall fortification genes, SAR induced genes and pathogenesis-related genes (PR) were upregulated. In addition, 20 genes were validated by RT-qPCR. Together, these data contribute to a better understanding of the molecular mechanisms triggered by the Aaa in sugarcane and opens the opportunity for the development of molecular markers associated with disease tolerance in breeding programs.

  3. Biochemical and molecular characterization of Avena indolines and their role in kernel texture.

    Science.gov (United States)

    Gazza, Laura; Taddei, Federica; Conti, Salvatore; Gazzelloni, Gloria; Muccilli, Vera; Janni, Michela; D'Ovidio, Renato; Alfieri, Michela; Redaelli, Rita; Pogna, Norberto E

    2015-02-01

    Among cereals, Avena sativa is characterized by an extremely soft endosperm texture, which leads to some negative agronomic and technological traits. On the basis of the well-known softening effect of puroindolines in wheat kernel texture, in this study, indolines and their encoding genes are investigated in Avena species at different ploidy levels. Three novel 14 kDa proteins, showing a central hydrophobic domain with four tryptophan residues and here named vromindoline (VIN)-1,2 and 3, were identified. Each VIN protein in diploid oat species was found to be synthesized by a single Vin gene whereas, in hexaploid A. sativa, three Vin-1, three Vin-2 and two Vin-3 genes coding for VIN-1, VIN-2 and VIN-3, respectively, were described and assigned to the A, C or D genomes based on similarity to their counterparts in diploid species. Expression of oat vromindoline transgenes in the extra-hard durum wheat led to accumulation of vromindolines in the endosperm and caused an approximate 50 % reduction of grain hardness, suggesting a central role for vromindolines in causing the extra-soft texture of oat grain. Further, hexaploid oats showed three orthologous genes coding for avenoindolines A and B, with five or three tryptophan residues, respectively, but very low amounts of avenoindolines were found in mature kernels. The present results identify a novel protein family affecting cereal kernel texture and would further elucidate the phylogenetic evolution of Avena genus.

  4. Regulatory role of tetR gene in a novel gene cluster of Acidovorax avenae subsp. avenae RS-1 under oxidative stress

    OpenAIRE

    Liu, He; Yang, Chun-Lan; Ge, Meng-Yu; Ibrahim, Muhammad; Li, Bin; Zhao, Wen-Jun; Chen, Gong-You; Zhu, Bo; Xie, Guan-Lin

    2014-01-01

    Acidovorax avenae subsp. avenae is the causal agent of bacterial brown stripe disease in rice. In this study, we characterized a novel horizontal transfer of a gene cluster, including tetR, on the chromosome of A. avenae subsp. avenae RS-1 by genome-wide analysis. TetR acted as a repressor in this gene cluster and the oxidative stress resistance was enhanced in tetR-deletion mutant strain. Electrophoretic mobility shift assay demonstrated that TetR regulator bound directly to the promoter of ...

  5. Differential expression of in vivo and in vitro protein profile of outer membrane of Acidovorax avenae subsp. avenae.

    Directory of Open Access Journals (Sweden)

    Muhammad Ibrahim

    Full Text Available Outer membrane (OM proteins play a significant role in bacterial pathogenesis. In this work, we examined and compared the expression of the OM proteins of the rice pathogen Acidovorax avenae subsp. avenae strain RS-1, a Gram-negative bacterium, both in an in vitro culture medium and in vivo rice plants. Global proteomic profiling of A. avenae subsp. avenae strain RS-1 comparing in vivo and in vitro conditions revealed the differential expression of proteins affecting the survival and pathogenicity of the rice pathogen in host plants. The shotgun proteomics analysis of OM proteins resulted in the identification of 97 proteins in vitro and 62 proteins in vivo by mass spectrometry. Among these OM proteins, there is a high number of porins, TonB-dependent receptors, lipoproteins of the NodT family, ABC transporters, flagellins, and proteins of unknown function expressed under both conditions. However, the major proteins such as phospholipase and OmpA domain containing proteins were expressed in vitro, while the proteins such as the surface anchored protein F, ATP-dependent Clp protease, OmpA and MotB domain containing proteins were expressed in vivo. This may indicate that these in vivo OM proteins have roles in the pathogenicity of A. avenae subsp. avenae strain RS-1. In addition, the LC-MS/MS identification of OmpA and MotB validated the in silico prediction of the existance of Type VI secretion system core components. To the best of our knowledge, this is the first study to reveal the in vitro and in vivo protein profiles, in combination with LC-MS/MS mass spectra, in silico OM proteome and in silico genome wide analysis, of pathogenicity or plant host required proteins of a plant pathogenic bacterium.

  6. Differential expression of in vivo and in vitro protein profile of outer membrane of Acidovorax avenae subsp. avenae.

    Science.gov (United States)

    Ibrahim, Muhammad; Shi, Yu; Qiu, Hui; Li, Bin; Jabeen, Amara; Li, Liping; Liu, He; Kube, Michael; Xie, Guanlin; Wang, Yanli; Blondel, Carlos; Santiviago, Carlos A; Contreras, Ines; Sun, Guochang

    2012-01-01

    Outer membrane (OM) proteins play a significant role in bacterial pathogenesis. In this work, we examined and compared the expression of the OM proteins of the rice pathogen Acidovorax avenae subsp. avenae strain RS-1, a Gram-negative bacterium, both in an in vitro culture medium and in vivo rice plants. Global proteomic profiling of A. avenae subsp. avenae strain RS-1 comparing in vivo and in vitro conditions revealed the differential expression of proteins affecting the survival and pathogenicity of the rice pathogen in host plants. The shotgun proteomics analysis of OM proteins resulted in the identification of 97 proteins in vitro and 62 proteins in vivo by mass spectrometry. Among these OM proteins, there is a high number of porins, TonB-dependent receptors, lipoproteins of the NodT family, ABC transporters, flagellins, and proteins of unknown function expressed under both conditions. However, the major proteins such as phospholipase and OmpA domain containing proteins were expressed in vitro, while the proteins such as the surface anchored protein F, ATP-dependent Clp protease, OmpA and MotB domain containing proteins were expressed in vivo. This may indicate that these in vivo OM proteins have roles in the pathogenicity of A. avenae subsp. avenae strain RS-1. In addition, the LC-MS/MS identification of OmpA and MotB validated the in silico prediction of the existance of Type VI secretion system core components. To the best of our knowledge, this is the first study to reveal the in vitro and in vivo protein profiles, in combination with LC-MS/MS mass spectra, in silico OM proteome and in silico genome wide analysis, of pathogenicity or plant host required proteins of a plant pathogenic bacterium.

  7. Fungicide Effect on Glomus Intrarradices in Different Genotypes of Beans (Phaseolus Vulgaris L., OAT (Avena Sativa L., and Wheat (Triticum Aaestivum L. Growth Cultivated in Two Soil Types under Greenhouse Conditions

    Directory of Open Access Journals (Sweden)

    Abdul Khalil Gardezi

    2013-12-01

    Full Text Available The objective of this research was to evaluate the effect of fungicides on the association with Glomus intraradices and soil contamination on three genotypes of beans (Phaseolus vulgaris L., one of oat (Avena sativa L., and another one of wheat (Triticum aestivum L.. The study was done under greenhouse conditions at the Montecillo Campus of the Postgraduate College, Mexico. Two soils were used, one irrigated with sewage water and the other one with clean water from a well. Half of the plants were inoculated with Glomus intraradices. Metacaptan was used as a fungicide applied to half of the seeds. The pH of the soil was alkaline. Electric conductivity, and organic matter, nitric and ammoniac nitrogen, phosphorous, copper and nickel quantities were higher on the soils irrigated with sewage water. The soil contamination did not affect significantly plant responses in this study. It is concluded that endomycorrhiza inoculation (Glomus intraradices gave better growth and yield, especially in beans. The application of fungicides improved plant growth.

  8. Gene Expression of Type VI Secretion System Associated with Environmental Survival in Acidovorax avenae subsp. avenae by Principle Component Analysis

    OpenAIRE

    Cui, Zhouqi; Jin, Guoqiang; Li, Bin; Kakar, Kaleem; Ojaghian, Mohammad; Wang, Yangli; Xie, Guanlin; Sun, Guochang

    2015-01-01

    Valine glycine repeat G (VgrG) proteins are regarded as one of two effectors of Type VI secretion system (T6SS) which is a complex multi-component secretion system. In this study, potential biological roles of T6SS structural and VgrG genes in a rice bacterial pathogen, Acidovorax avenae subsp. avenae (Aaa) RS-1, were evaluated under seven stress conditions using principle component analysis of gene expression. The results showed that growth of the pathogen was reduced by H2O2 and paraquat-i...

  9. Behavior of cereal's varieties in the presence of Heterodera avenae ...

    African Journals Online (AJOL)

    The behaviour of cereals varieties (Ofanto, Waha and Vitron for durum wheat; Anza and HD1120 for bread wheat and Saida with Acsad for barly) were tested towards Heterodera avenae. The analysis of the variance reveals that the nematode has an effect on the development of durum wheat for the number of ear per ...

  10. Prévalence de Acidovorax avenae subsp. avenae, agent des rayures bactériennes du riz dans les semences de base produites au Burkina Faso

    Directory of Open Access Journals (Sweden)

    Dakouo, D.

    2005-01-01

    Full Text Available Prevalence of Bacterial Stripe Organism, Acidovorax avenae subsp. avenae, in Breeder Rice Seed Samples from Burkina Faso. Nine rice seed samples of improved and local varieties were tested at DGISP (Denmark for the incidence of seed-borne bacterial stripe organism, Acidovorax avenae subsp. avenae, using the cassette holder method. Twenty-six suspected bacterial colonies were identified by different methods including colony morphology, pigmentation, biochemical and pathogenicity tests. Using Biolog GN computer identification system, isolates were also identified as A. avenae subsp. avenae (sim 0.51 to 0.9. All the 26 isolates reacted positively in ELISA tests performed with antiserum against A. avenae subsp. avenae. The bacterium was detected in all the samples, except in that of the local variety, indicating that seeds of improved varieties are highly infected by this pathogen. Seedlings raised from infected seed samples showed typical bacterial stripe symptoms with infection rates ranging from 4.7 to 20.1%. Since such seeds are used for production of certified rice seed, it is important to develop an effective control strategy against this disease to reduce the propagation of the bacterial agent in other healthy regions of rice culture in Burkina Faso.

  11. Calcium bridges are not load-bearing cell-wall bonds in Avena coleoptiles

    Science.gov (United States)

    Rayle, D. L.

    1989-01-01

    I examined the ability of frozen-thawed Avena sativa L. coleoptile sections under applied load to extend in response to the calcium chelators ethyleneglycol-bis-(beta-aminoethylether)-N,N,N',N'-tetraacetic acid (EGTA) and 2-[(2-bis-[carboxymethyl]amino-5-methylphenoxy)methyl]-6-methoxy-8-bis[car boxymethyl]aminoquinoline (Quin II). Addition of 5 mM EGTA to weakly buffered (0.1 mM, pH 6.2) solutions of 2(N-morpholino) ethanesulfonic acid (Mes) initiated rapid extension and wall acidification. When the buffer strength was increased (e.g. from 20 to 100 mM Mes, pH 6.2) EGTA did not initiate extension nor did it cause wall acidification. At 5 mM Quin II failed to stimulate cell extension or wall acidification at all buffer molarities tested (0.1 to 100 mM Mes). Both chelators rapidly and effectively removed Ca2+ from Avena sections. These data indicate that Ca2+ chelation per se does not result in loosening of Avena cells walls. Rather, EGTA promotes wall extension indirectly via wall acidification.

  12. The starch-bound alpha-amylase/trypsin-inhibitors in Avena.

    Science.gov (United States)

    Gazza, Laura; Gazzelloni, Gloria; Taddei, Federica; Latini, Arianna; Muccilli, Vera; Alfieri, Michela; Conti, Salvatore; Redaelli, Rita; Pogna, Norberto E

    2016-12-01

    Oat kernels exhibit an extra-soft texture, a trait recently demonstrated to be largely modulated by starch-bound tryptophan-rich 2S proteins, the vromindolines. In this study, fractionation by two-dimensional electrophoresis of starch-bound proteins in 25 oat (Avena sativa) cultivars and 11 diploid or tetraploid Avena species revealed novel 2S proteins called Avena α-amylase/trypsin-inhibitors (AATI) because of their sequence similarity with wheat α-amylase/trypsin inhibitors. Thirty-seven AATI polypeptides, about 14 kDa in size, were split into three families named AATI-1, AATI-2, and AATI-3 with different primary structures and isoelectric points. AATI-1 and AATI-2 proteins showed 55.5-60.0 % sequence similarity with wheat α-amylase inhibitors CM1, CM2, and CM16, which have been found to cause innate immunity responses in celiac disease and non-celiac gluten sensitivity. Diploid A-genome and tetraploid AC-genome oat species possess three and five genes encoding for the AATI proteins, respectively, whereas hexaploid A. sativa exhibits 12 genes dispersed over the A-, C-, and D-genomes. Some AATI proteins expressed in hexaploid oats were assigned to the A-genome based on similarity to their counterparts in diploid species, contributing to further clarify the genetic origin of hexaploid oats. Moreover, AATI may interact with starch-bound vromindolines in determining the extra-soft texture of oat kernels and, due to their balanced amino acid compositions, may contribute to the biological value of oat proteins in a positive manner.

  13. Puccinia coronata f. sp. avenae: a threat to global oat production

    Science.gov (United States)

    Puccinia coronata f. sp. avenae causes crown rust disease in cultivated and wild oat. The significant yield losses inflicted by this pathogen makes crown rust the most devastating disease in the oat industry. P. coronata f. sp. avenae is a basidiomycete fungus with an obligate biotrophic lifestyle a...

  14. Pronóstico productivo de la avena forrajera de temporal por efecto del cambio climático en el noroeste de Chihuahua, México

    OpenAIRE

    Daniel Villazón Bustillos; Héctor Rubio Arias; Jesús M. Ochoa Rivero; Celia de la Mora

    2017-01-01

    El cambio climático puede afectar la productividad de los cultivos en una región determinada. El objetivo fue identificar la variabilidad en la producción de avena forrajera ( Avena sativa L.) de temporal utilizando una función estocástica y analizar sus relaciones con la temperatura y precipitación, ante escenarios de cambio climático en la región noroeste de Chihuahua, México. Se obtuvo información estadística de 13 años (2001 - 2013) en las estacione...

  15. The outer epidermis of Avena and maize coleoptiles is not a unique target for auxin in elongation growth

    Science.gov (United States)

    Cleland, R. E.

    1991-01-01

    A controversy exists as to whether or not the outer epidermis in coleoptiles is a unique target for auxin in elongation growth. The following evidence indicates that the outer epidermis is not the only auxin-responsive cell layer in either Avena sativa L. or Zea mays L. coleoptiles. Coleoptile sections from which the epidermis has been removed by peeling elongate in response to auxin. The magnitude of the response is similar to that of intact sections provided the incubation solution contains both auxin and sucrose. The amount of elongation is independent of the amount of epidermis removed. Sections of oat coleoptiles from which the epidermis has been removed from one side are nearly straight after 22 h in auxin and sucrose, despite extensive growth of the sections. These data indicate that the outer epidermis is not a unique target for auxin in elongation growth, at least in Avena and maize coleoptiles.

  16. Hospedeiros alternativos de Acidovorax avenae subsp. citrulli Alternative hosts of Acidovorax avenae subsp. citrulli

    Directory of Open Access Journals (Sweden)

    Ana Rosa P. Nascimento

    2004-09-01

    Full Text Available Uma das principais doenças que afeta o meloeiro é a mancha-aquosa, causada pela bactéria Acidovorax avenae subsp. citrulli (Aac. Visando conhecer hospedeiros alternativos de Aac, plantas no estágio de primeiras folhas definitivas, de várias espécies/cultivares, incluindo cucurbitáceas, solanáceas, gramíneas, leguminosas e caricáceas, foram inoculadas pela atomização da parte aérea com suspensão dos isolados Aac 1.49 e Aac 12.13, oriundos de melão e melancia, respectivamente. A suscetibilidade das plantas aos isolados foi avaliada pelo período de incubação (PI e incidência da doença (INC. Caupi, feijão, fumo e milho não apresentaram sintomas. Os menores PIs foram observados em cucurbitáceas (3,0 d, com exceção da bucha (6,83 d. Incidências da doença acima de 90% foram observadas em cucurbitáceas, excetuando a bucha e em solanáceas, para ambos os isolados de Aac. Em outro experimento, frutos de abóbora, abobrinha, berinjela, mamão, maxixe, melancia, melão, pepino, pimentão e tomate foram analisados quanto à suscetibilidade aos isolados Aac 1.49 e Aac 12.13. Os frutos foram inoculados pelo método de injeção subepidérmica, determinando-se PI, INC e severidade, avaliada pelo diâmetro da lesão externa (DLE e profundidade da lesão (PL. Menores PIs (2,0 d foram detectados em frutos de mamão, melancia, melão e pimentão. Incidência de 100% foi observada em todos os frutos inoculados, com exceção da abobrinha (93,75% e da abóbora (34,37%. Maiores DLEs foram observados em pepino (1,47 cm para o isolado Aac 1.49 e em melancia (1,60 cm e melão (1,07 cm para Aac 12.13. As maiores PL foram constatadas em melancia (1,72 e 0,75 cm respectivamente para Aac 1.49 e Aac 12.13. Frutos de berinjela não apresentaram sintomas externos embora as lesões internas tenham sido profundas.One of the most important melon diseases is the bacterial blotch caused by Acidovorax avenae subsp. citrulli (Aac. Alternative hosts of this

  17. Role of Blossoms in Watermelon Seed Infestation by Acidovorax avenae subsp. citrulli.

    Science.gov (United States)

    Walcott, R R; Gitaitis, R D; Castro, A C

    2003-05-01

    ABSTRACT The role of watermelon blossom inoculation in seed infestation by Acidovorax avenae subsp. citrulli was investigated. Approximately 98% (84/87) of fruit developed from blossoms inoculated with 1 x 10(7) or 1 x 10(9) CFU of A. avenae subsp. citrulli per blossom were asymptomatic. Using immunomagnetic separation and the polymerase chain reaction, A. avenae subsp. citrulli was detected in 44% of the seed lots assayed, despite the lack of fruit symptoms. Furthermore, viable colonies were recovered from 31% of the seed lots. Of these lots, 27% also yielded seedlings expressing bacterial fruit blotch symptoms when planted under conditions of 30 degrees C and 90% relative humidity. A. avenae subsp. citrulli was detected and recovered from the pulp of 33 and 19%, respectively, of symptomless fruit whose blossoms were inoculated with A. avenae subsp. citrulli. The ability to penetrate watermelon flowers was not unique to A. avenae subsp. citrulli, because blossoms inoculated with Pantoea ananatis also resulted in infested seed and pulp. The data indicate that watermelon blossoms are a potential site of ingress for fruit and seed infestation by A. avenae subsp. citrulli.

  18. Watery Saliva Secreted by the Grain Aphid Sitobion avenae Stimulates Aphid Resistance in Wheat.

    Science.gov (United States)

    Zhang, Yong; Fan, Jia; Francis, Frédéric; Chen, Julian

    2017-10-11

    Infestation with Sitobion avenae induces localized defense responses in wheat; in this study, the role of S. avenae watery saliva in resistance induction was examined by infiltrating aphid saliva into wheat leaves. After feeding S. avenae on an artificial diet for 48 h, we first collected watery saliva from them and then separated the salivary proteins using one-dimensional gel electrophoresis. Gene expression studies showed that infiltration of S. avenae watery saliva in wheat leaves induced a strong salicylic acid-responsive defense but moderate jasmonic acid-dependent defense. Feeding on wheat leaves infiltrated with aphid saliva, compared with untreated leaves, significantly decreased the number of nymphs produced per day and the intrinsic rate of increase of the population of S. avenae. In a choice test against untreated wheat, saliva-infiltrated wheat had repellent effects on aphids. Additionally, electrical penetration graph results showed that the feeding behavior of S. avenae on saliva-treated wheat was negatively affected compared with that on untreated wheat. These findings provided direct evidence that salivary components of S. avenae are involved in the induction of wheat resistance against aphids and further demonstrated the important roles of watery saliva in aphid-plant interactions.

  19. Use of Repetitive Sequences for Molecular and Cytogenetic Characterization of Avena Species from Portugal.

    Science.gov (United States)

    Tomás, Diana; Rodrigues, Joana; Varela, Ana; Veloso, Maria Manuela; Viegas, Wanda; Silva, Manuela

    2016-02-04

    Genomic diversity of Portuguese accessions of Avena species--diploid A. strigosa and hexaploids A. sativa and A. sterilis--was evaluated through molecular and cytological analysis of 45S rDNA, and other repetitive sequences previously studied in cereal species--rye subtelomeric sequence (pSc200) and cereal centromeric sequence (CCS1). Additionally, retrotransposons and microsatellites targeting methodologies--IRAP (inter-retrotransposon amplified polymorphism) and REMAP (retrotransposon-microsatellite amplified polymorphism)--were performed. A very high homology was detected for ribosomal internal transcribed sequences (ITS1 and ITS2) between the species analyzed, although nucleolar organizing regions (NOR) fluorescent in situ hybridization (FISH) analysis revealed distinct number of Nor loci between diploid and hexaploid species. Moreover, morphological diversity, evidenced by FISH signals with different sizes, was observed between distinct accessions within each species. pSc200 sequences were for the first time isolated from Avena species but proven to be highly similar in all genotypes analyzed. The use of primers designed for CCS1 unraveled a sequence homologous to the Ty3/gypsy retrotransposon Cereba, that was mapped to centromeric regions of diploid and hexaploid species, being however restricted to the more related A and D haplomes. Retrotransposon-based methodologies disclosed species- and accessions-specific bands essential for the accurate discrimination of all genotypes studied. Centromeric, IRAP and REMAP profiles therefore allowed accurate assessment of inter and intraspecific variability, demonstrating the potential of these molecular markers on future oat breeding programs.

  20. The evolution pattern of rDNA ITS in Avena and phylogenetic relationship of the Avena species (Poaceae: Aveneae).

    Science.gov (United States)

    Peng, Yuan-Ying; Baum, Bernard R; Ren, Chang-Zhong; Jiang, Qian-Tao; Chen, Guo-Yue; Zheng, You-Liang; Wei, Yu-Ming

    2010-10-01

    Ribosomal ITS sequences are commonly used for phylogenetic reconstruction because they are included in rDNA repeats, and these repeats often undergo rapid concerted evolution within and between arrays. Therefore, the rDNA ITS copies appear to be virtually identical and can sometimes be treated as a single gene. In this paper we examined ITS polymorphism within and among 13 diploid (A and C genomes), seven tetraploid (AB, AC and CC genomes) and four hexaploid (ACD genome) to infer the extent and direction of concerted evolution, and to reveal the phylogenetic and genome relationship among species of Avena. A total of 170 clones of the ITS1-5.8S-ITS2 fragment were sequenced to carry out haplotype and phylogenetic analysis. In addition, 111 Avena ITS sequences retrieved from GenBank were combined with 170 clones to construct a phylogeny and a network. We demonstrate the major divergence between the A and C genomes whereas the distinction among the A and B/D genomes was generally not possible. High affinity among the A(d) genome species A. damascena and the ACD genome species A. fatua was found, whereas the rest of the ACD genome hexaploids and the AACC tetraploids were highly affiliated with the A(l) genome diploid A. longiglumis. One of the AACC species A. murphyi showed the closest relationship with most of the hexaploid species. Both C(v) and C(p) genome species have been proposed as paternal donors of the C-genome carrying polyploids. Incomplete concerted evolution is responsible for the observed differences among different clones of a single Avena individual. The elimination of C-genome rRNA sequences and the resulting evolutionary inference of hexaploid species are discussed. © 2010 The Authors.

  1. Chromosomal distribution patterns of the (AC)10microsatellite and other repetitive sequences, and their use in chromosome rearrangement analysis of species of the genus Avena.

    Science.gov (United States)

    Fominaya, Araceli; Loarce, Yolanda; Montes, Alexander; Ferrer, Esther

    2017-03-01

    Fluorescence in situ hybridization (FISH) was used to determine the physical location of the (AC) 10 microsatellite in metaphase chromosomes of six diploid species (AA or CC genomes), two tetraploid species (AACC genome), and five cultivars of two hexaploid species (AACCDD genome) of the genus Avena, a genus in which genomic relationships remain obscure. A preferential distribution of the (AC) 10 microsatellite in the pericentromeric and interstitial regions was seen in both the A- and D-genome chromosomes, while in C-genome chromosomes the majority of signals were located in the pericentromeric heterochromatic regions. New large chromosome rearrangements were detected in two polyploid species: an intergenomic translocation involving chromosomes 17AL and 21DS in Avena sativa 'Araceli' and another involving chromosomes 4CL and 21DS in the analyzed cultivars of Avena byzantina. The latter 4CL-21DS intergenomic translocation differentiates clearly between A. sativa and A. byzantina. Searches for common hybridization patterns on the chromosomes of different species revealed chromosome 10A of Avena magna and 21D of hexaploid oats to be very similar in terms of the distribution of 45S and Am1 sequences. This suggests a common origin for these chromosomes and supports a CCDD rather than an AACC genomic designation for this species.

  2. Transcriptome analysis of Acidovorax avenae subsp. avenae cultivated in vivo and co-culture with Burkholderia seminalis.

    Science.gov (United States)

    Li, Bin; Ibrahim, Muhammad; Ge, Mengyu; Cui, Zhouqi; Sun, Guochang; Xu, Fei; Kube, Michael

    2014-07-16

    Response of bacterial pathogen to environmental bacteria and its host is critical for understanding of microbial adaption and pathogenesis. Here, we used RNA-Seq to comprehensively and quantitatively assess the transcriptional response of Acidovorax avenae subsp. avenae strain RS-1 cultivated in vitro, in vivo and in co-culture with rice rhizobacterium Burkholderia seminalis R456. Results revealed a slight response to other bacteria, but a strong response to host. In particular, a large number of virulence associated genes encoding Type I to VI secretion systems, 118 putative non-coding RNAs, and 7 genomic islands (GIs) were differentially expressed in vivo based on comparative genomic and transcriptomic analyses. Furthermore, the loss of virulence for knockout mutants of 11 differentially expressed T6SS genes emphasized the importance of these genes in bacterial pathogenicity. In addition, the reliability of expression data obtained by RNA-Seq was supported by quantitative real-time PCR of the 25 selected T6SS genes. Overall, this study highlighted the role of differentially expressed genes in elucidating bacterial pathogenesis based on combined analysis of RNA-Seq data and knockout of T6SS genes.

  3. Gene Expression of Type VI Secretion System Associated with Environmental Survival in Acidovorax avenae subsp. avenae by Principle Component Analysis

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    Zhouqi Cui

    2015-09-01

    Full Text Available Valine glycine repeat G (VgrG proteins are regarded as one of two effectors of Type VI secretion system (T6SS which is a complex multi-component secretion system. In this study, potential biological roles of T6SS structural and VgrG genes in a rice bacterial pathogen, Acidovorax avenae subsp. avenae (Aaa RS-1, were evaluated under seven stress conditions using principle component analysis of gene expression. The results showed that growth of the pathogen was reduced by H2O2 and paraquat-induced oxidative stress, high salt, low temperature, and vgrG mutation, compared to the control. However, pathogen growth was unaffected by co-culture with a rice rhizobacterium Burkholderia seminalis R456. In addition, expression of 14 T6SS structural and eight vgrG genes was significantly changed under seven conditions. Among different stress conditions, high salt, and low temperature showed a higher effect on the expression of T6SS gene compared with host infection and other environmental conditions. As a first report, this study revealed an association of T6SS gene expression of the pathogen with the host infection, gene mutation, and some common environmental stresses. The results of this research can increase understanding of the biological function of T6SS in this economically-important pathogen of rice.

  4. Gene Expression of Type VI Secretion System Associated with Environmental Survival in Acidovorax avenae subsp. avenae by Principle Component Analysis.

    Science.gov (United States)

    Cui, Zhouqi; Jin, Guoqiang; Li, Bin; Kakar, Kaleem Ullah; Ojaghian, Mohammad Reza; Wang, Yangli; Xie, Guanlin; Sun, Guochang

    2015-09-11

    Valine glycine repeat G (VgrG) proteins are regarded as one of two effectors of Type VI secretion system (T6SS) which is a complex multi-component secretion system. In this study, potential biological roles of T6SS structural and VgrG genes in a rice bacterial pathogen, Acidovorax avenae subsp. avenae (Aaa) RS-1, were evaluated under seven stress conditions using principle component analysis of gene expression. The results showed that growth of the pathogen was reduced by H₂O₂ and paraquat-induced oxidative stress, high salt, low temperature, and vgrG mutation, compared to the control. However, pathogen growth was unaffected by co-culture with a rice rhizobacterium Burkholderia seminalis R456. In addition, expression of 14 T6SS structural and eight vgrG genes was significantly changed under seven conditions. Among different stress conditions, high salt, and low temperature showed a higher effect on the expression of T6SS gene compared with host infection and other environmental conditions. As a first report, this study revealed an association of T6SS gene expression of the pathogen with the host infection, gene mutation, and some common environmental stresses. The results of this research can increase understanding of the biological function of T6SS in this economically-important pathogen of rice.

  5. Biology and management of Avena fatua and Avena ludoviciana: two noxious weed species of agro-ecosystems.

    Science.gov (United States)

    Bajwa, Ali Ahsan; Akhter, Muhammad Javaid; Iqbal, Nadeem; Peerzada, Arslan Masood; Hanif, Zarka; Manalil, Sudheesh; Hashim, Saima; Ali, Hafiz Haider; Kebaso, Lynda; Frimpong, David; Namubiru, Halima; Chauhan, Bhagirath Singh

    2017-08-01

    Avena fatua and Avena ludoviciana are closely related grass weed species infesting a large number of crops around the world. These species are widely distributed in diverse agro-ecosystems from temperate to sub-tropical regions due to their unique seed traits, successful germination ecology, high competitive ability, and allelopathic potential. A. fatua is more widespread, adaptable, and problematic than A. ludoviciana. Both these species infest major winter and spring crops, including wheat, oat, barley, canola, maize, alfalfa, and sunflower, causing up to 70% yield losses depending on crop species and weed density. Chemical control has been challenged by large-scale herbicide resistance evolution in these weed species. A. fatua is the most widespread herbicide-resistant weed in the world, infesting about 5 million hectares in 13 countries. The use of alternative herbicides with different modes of action has proved effective. Several cultural practices, including diverse crop rotations, cover crops, improved crop competition (using competitive cultivars, high seed rates, narrow row spacing, altered crop geometry), and allelopathic suppression, have shown promise for controlling A. fatua and A. ludoviciana. The integrated use of these cultural methods can reduce the herbicide dose required, and lower dependency on herbicides to control these grasses. Moreover, integrated management may successfully control herbicide-resistant populations of these weed species. The use of integrated approaches based on the knowledge of biology and ecology of A. fatua and A. ludoviciana may help to manage them sustainably in the future.

  6. Genomic relationships among sixteen species of Avena based on (ACT)6trinucleotide repeat FISH.

    Science.gov (United States)

    Luo, Xiaomei; Tinker, Nick A; Zhou, Yonghong; Wight, Charlene P; Liu, Juncheng; Wan, Wenlin; Chen, Liang; Peng, Yuanying

    2018-01-01

    Knowledge of the locations of repeat elements could be very important in the assembly of genome sequences and their assignment to physical chromosomes. Genomic and species relationships among 16 species were investigated using fluorescence in situ hybridization (FISH) with the Am1 and (ACT) 6 probes. The Am1 oligonucleotide probe was particularly enriched in the C genomes, whereas the (ACT) 6 trinucleotide repeat probe showed a diverse distribution of hybridization patterns in the A, AB, C, AC, and ACD genomes but might not be present in the B and D genomes. The hybridization pattern of Avena sativa was very similar to that of A. insularis, indicating that this species most likely originated from A. insularis as a tetraploid ancestor. Although the two FISH probes failed to identify relationships of more species, this proof-of-concept approach opens the way to the use of FISH probes in assigning other signature elements from genomic sequence to physical chromosomes.

  7. Intoxicação espontânea e experimental por nitrato/nitrito em bovinos alimentados com Avena sativa (aveia e/ou Lolium spp. (azevém

    Directory of Open Access Journals (Sweden)

    Fernanda Jönck

    2013-09-01

    Full Text Available Descrevem-se os dados epidemiológicos, sinais clínicos e lesões da intoxicação espontânea e experimental por nitrato e nitrito em bovinos alimentados com pastagens de Avena sativa (aveia e/ou Lolium spp (azevém. A enfermidade ocorre em diferentes regiões do Estado de Santa Catarina, quando as pastagens tem crescimento exuberante, após receberem quantidades excessivas de adubo químico e/ou orgânico, principalmente quando ocorrem condições climáticas de seca e posteriormente chuva. Os animais em contato com essas pastagens desenvolvem rapidamente mucosas de coloração marrom, taquipnéia, andar cambaleante, micção frequente, timpanismo, decúbito lateral e morte em poucos minutos, ou recuperação algumas horas após. Na necropsia de quatro animais que adoeceram espontaneamente, as principais alterações encontradas foram a coloração marrom das mucosas, a cor escura do sangue (cor de chocolate e a coloração vermelho intensa da musculatura esquelética e do miocárdio esquerdo. A reprodução experimental da doença foi realizada em sete bovinos, com pastagens de quatro propriedades onde ocorreu adoença. Aveia e/ou azevém verdes e sob a forma de feno foram administradas aos bovinos. Destes bovinos quatro morreram, dois adoeceram e se recuperam, um naturalmente e outro com a aplicação de azul de metileno a 1%, na dose de 2mg/kg/peso vivo, e um bovino não apresentou alterações. Os sinais clínicos observados e as lesões nos animais que adoeceram e morreram foram idênticos aos casos naturais. Alterações microscópicas não foram observadas nos casos naturais e experimentais. O teste da difenilamina nas amostras de pastagens onde ocorreram os surtos resultou positivo em todas as propriedades. A análise bromatológica realizada em amostras coletadas de várias propriedades em que ocorreram surtos revelou de 0,30 a 3,36% de nitrato na matéria seca. A enfermidade caracterizou-se principalmente por respiração ofegante

  8. Reclassification of subspecies of Acidovorax avenae as A. Avenae (Manns 1905) emend., A. cattleyae (Pavarino, 1911) comb. nov., A. citrulli Schaad et al., 1978) comb. nov., and proposal of A. oryzae sp. nov.

    Science.gov (United States)

    Schaad, Norman W; Postnikova, Elena; Sechler, Aaron; Claflin, Larry E; Vidaver, Anne K; Jones, Jeffrey B; Agarkova, Irina; Ignatov, Alexander; Dickstein, Ellen; Ramundo, Bruce A

    2008-12-01

    The bacterium Acidovorax avenae causes disease in a wide range of economically important monocotyledonous and dicotyledonous plants, including corn, rice, watermelon, anthurium, and orchids. Genotypic and phenotypic relatedness among strains of phytopathogenic A. avenae subsp. avenae, A. avenae subsp. citrulli, A. avenae subsp. cattleyae and A. konjaci, as well as all other Acidovorax species, including A. facilis, the type strain of Acidovorax, was determined. The 16s rDNA sequencing confirmed previous studies showing the environmental species to be very distant from the phytopathogenic species. DNA/DNA reassociation assays on the different strains of A. avenae revealed four (A, B, C, and D) distinct genotypes. Taxon A included six A. avenae subsp. avenae strains from corn that had a mean reciprocal similarity of 81%; taxon B included six A. avenae subsp. avenae strains from rice that had a mean reciprocal similarity of 97%; taxon C contained 11 A. avenae subsp. citrulli strains from cucurbits (cantaloupe, watermelon, and pumpkin) that had a mean reciprocal similarity of 88%, and taxon D contained four A. avenae subsp. cattleyae strains from orchids that had a mean similarity of 98%. The mean reciprocal relatedness between taxa A, B, C, and D was less than 70%. Sequence analysis of 16S rDNA and the 16S-23S rDNA internally transcribed spacer region, as well as AFLP analysis, revealed the same four taxa. All four were easily differentiated phenotypically from each other and from all other recognized Acidovorax species. Strains of A. avenae did not contain 3-hydroxyoctanoic acid, which was found in all other species. On the basis of these and previous genetic and phenotypic results, we propose an emendation of the species A. avenae. A. avenae subsp. citrulli (C strains) and A. avenae subsp. cattleyae (D strains) should be elevated to species rank as A. citrulli and A. cattleyae, respectively. We further propose a new taxon for the B strains, A. oryzae sp. nov. with

  9. Regulatory role of tetR gene in a novel gene cluster of Acidovorax avenae subsp. avenae RS-1 under oxidative stress

    Directory of Open Access Journals (Sweden)

    He eLiu

    2014-10-01

    Full Text Available Acidovorax avenae subsp. avenae is the causal agent of bacterial brown stripe disease in rice. In this study, we characterized a novel horizontal transfer of a gene cluster, including tetR, on the chromosome of A. avenae subsp. avenae RS-1 by genome-wide analysis. TetR acted as a repressor in this gene cluster and the oxidative stress resistance was enhanced in tetR-deletion mutant strain. Electrophoretic mobility shift assay (EMSA demonstrated that TetR regulator bound directly to the promoter of this gene cluster. Consistently, the results of quantitative real-time PCR also showed alterations in expression of associated genes. Moreover, the proteins affected by TetR under oxidative stress were revealed by comparing proteomic profiles of wild-type and mutant strains via 1D SDS-PAGE and LC-MS/MS analyses. Taken together, our results demonstrated that tetR gene in this novel gene cluster contributed to cell survival under oxidative stress, and TetR protein played an important regulatory role in growth kinetics, biofilm-forming capability, SOD and catalase activity, and oxide detoxicating ability.

  10. Regulatory role of tetR gene in a novel gene cluster of Acidovorax avenae subsp. avenae RS-1 under oxidative stress.

    Science.gov (United States)

    Liu, He; Yang, Chun-Lan; Ge, Meng-Yu; Ibrahim, Muhammad; Li, Bin; Zhao, Wen-Jun; Chen, Gong-You; Zhu, Bo; Xie, Guan-Lin

    2014-01-01

    Acidovorax avenae subsp. avenae is the causal agent of bacterial brown stripe disease in rice. In this study, we characterized a novel horizontal transfer of a gene cluster, including tetR, on the chromosome of A. avenae subsp. avenae RS-1 by genome-wide analysis. TetR acted as a repressor in this gene cluster and the oxidative stress resistance was enhanced in tetR-deletion mutant strain. Electrophoretic mobility shift assay demonstrated that TetR regulator bound directly to the promoter of this gene cluster. Consistently, the results of quantitative real-time PCR also showed alterations in expression of associated genes. Moreover, the proteins affected by TetR under oxidative stress were revealed by comparing proteomic profiles of wild-type and mutant strains via 1D SDS-PAGE and LC-MS/MS analyses. Taken together, our results demonstrated that tetR gene in this novel gene cluster contributed to cell survival under oxidative stress, and TetR protein played an important regulatory role in growth kinetics, biofilm-forming capability, superoxide dismutase and catalase activity, and oxide detoxicating ability.

  11. Tratamentos físicos do grão de aveia branca (Avena sativa na alimentação de bovinos Treatments of oats grain for beef cattle feeding

    Directory of Open Access Journals (Sweden)

    Léo José Goi

    1998-06-01

    Full Text Available O presente trabalho foi conduzido no Centro de Treinamento da COTRIJUÍ, e no Departamento de Zootecnia da UFSM, de maio a dezembro de 1993, para avaliar o efeito de diferentes formas de tratamento físico do grão de aveia sobre o desempenho e a digestibilidade de bovinos. Foram conduzidos dois experimentos para comparar o grão de aveia nas formas: grão inteiro seco (GAIS, grão moído (GAMO, grão machacado (GAMA e grão inteiro umedecido (GAIU. No experimento 1, foram utilizados 24 animais da raça Hereford, com idade média de 13 meses e peso médio de 260kg. Foi usado o delineamento inteiramente casualizado para avaliar o efeito do tratamento do grão no ganho de peso. A duração do experimento foi de 84 dias. Os ganhos de peso médio diário obtidos foram: 1,047; 1,055; 1,107 e l,067 kg para os tratamentos GAIS, GAMO, GAMA e GAIU, respectivamente. Não houve diferença significativa entre tratamentos. No experimento II foram utilizados, durante dois períodos, 8 novilhos da raça Holandês com idade média de 14 meses e peso médio de 243kg, em delineamento em blocos casualizados, objetivando avaliar o efeito do tratamento do grão sobre a digestibilidade da dieta. A dieta experimental foi similar ao experimento I, sendo o feno de bermuda (Cynodon dactylon substituído pelo feno de aveia (Avena sativa moído. Não houve diferença significativa entre os tratamentos quanto aos coeficientes de digestibilidade da matéria seca, matéria orgânica, fibra bruta, proteína bruta, extrato etéreo e extrativos não nitrogenados, nem para o NDT. Os valores de digestibilidade da matéria orgânica obtidos foram: 59,27; 57,10; 61,46 e 59,7 6% para os tratamentos GAIS, GAMO, GAMA e GAIU, respectivamente e para estes, o NDT foram 64,02; 66,56; 65,78 e 62,12%. Conclui-se que o grão de aveia branca pode ser utilizado inteiro na alimentação de bovinos sem afetar sua performance.The present work was conducted at COTRIJUÍ Experimental Farm-RS from

  12. Biological Control to Protect Watermelon Blossoms and Seed from Infection by Acidovorax avenae subsp. citrulli.

    Science.gov (United States)

    Fessehaie, A; Walcott, R R

    2005-04-01

    ABSTRACT The efficacy of biological control seed treatments with Pseudomonas fluorescens (A506), Acidovorax avenae subsp. avenae (AAA 99-2), and an unidentified gram-positive bacterium recovered from watermelon seed (WS-1) was evaluated for the management of bacterial fruit blotch (BFB) of watermelon. In growth chamber and greenhouse experiments, seed treated with AAA 99-2 displayed superior disease suppression, reducing BFB transmission by 96.5%. AAA 99-2, P. fluorescens A506, and Kocide also suppressed the epiphytic growth of A. avenae subsp. citrulli when applied to attached watermelon blossoms 5 h prior to inoculation. Watermelon blossom protection reduced seed infestation by A. avenae subsp. citrulli. From blossoms treated with 0.1 M phosphate buffered saline (PBS), 63% of the resulting seed lots were infested with A. avenae subsp. citrulli. In contrast, for blossoms protected with WS-1, Kocide, P. fluorescens A506, and AAA 99-2, the proportion of infested seed lots were 48.3, 21.1, 24.1, and 13.8%, respectively. The effect of blossom treatments on seed lot infestation was statistically significant (P = 0.001) but WS-1 was not significantly different from PBS. These findings suggest that blossom protection with biological control agents could be a feasible option for managing BFB.

  13. Métodos de preservação de Acidovorax avenae subsp. citrulli Preservation of Acidovorax avenae subsp. citrulli

    Directory of Open Access Journals (Sweden)

    Dário Venâncio de Araújo

    2008-06-01

    Full Text Available Acidovorax avenae subsp. citrulli (Aac, agente da mancha-aquosa, causa grandes prejuízos ao melão e outras cucurbitáceas no Brasil e no mundo. Os métodos dessecação em papel de filtro, repicagens periódicas, água esterilizada e folhas herborizadas foram testados para preservação de Aac1 e Aac1.12 durante 180 dias. Mensalmente, a viabilidade de Aac foi avaliada pelo crescimento em meio de cultura e a patogenicidade das culturas viáveis foi avaliada pela incidência e severidade da doença em plântulas de melão. A preservação em papel de filtro resultou em 100% de viabilidade dos isolados durante o período, enquanto que nos demais métodos houve perda de viabilidade no decorrer das avaliações. Os métodos de dessecação em papel de filtro e o de repicagens periódicas foram mais eficientes que a água esterilizada e folhas herborizadas na manutenção da patogenicidade dos isolados durante os 180 dias.The phytopathogenic bacteria Acidovorax avenae subsp. citrulli (Aac, agent of bacterial blotch, causes severe damages to melon and other cucurbits in Brazil and worlwide. The methods desiccation in filter paper, periodic transfer, sterile water and dried leaves were tested for preserving the strains Aac1 and Aac1.12 of this bacterium during 180 days. Evaluations of bacterial viability were performed monthly by growing strains on culture media. The pathogenicity of viable cultures was evaluated by disease incidence and severity on melon seedlings. The desiccation in filter paper maintained 100% viability of the strains during the period while using the other methods, viability was lost during evaluations. Desiccation in filter paper and periodic transfer were more efficient than sterile water and dried leaves in maintening strain pathogenicity during the time evaluated 180 days.

  14. Glycosyltransferases from Oat (Avena) Implicated in the Acylation of Avenacins*

    Science.gov (United States)

    Owatworakit, Amorn; Townsend, Belinda; Louveau, Thomas; Jenner, Helen; Rejzek, Martin; Hughes, Richard K.; Saalbach, Gerhard; Qi, Xiaoquan; Bakht, Saleha; Roy, Abhijeet Deb; Mugford, Sam T.; Goss, Rebecca J. M.; Field, Robert A.; Osbourn, Anne

    2013-01-01

    Plants produce a huge array of specialized metabolites that have important functions in defense against biotic and abiotic stresses. Many of these compounds are glycosylated by family 1 glycosyltransferases (GTs). Oats (Avena spp.) make root-derived antimicrobial triterpenes (avenacins) that provide protection against soil-borne diseases. The ability to synthesize avenacins has evolved since the divergence of oats from other cereals and grasses. The major avenacin, A-1, is acylated with N-methylanthranilic acid. Previously, we have cloned and characterized three genes for avenacin synthesis (for the triterpene synthase SAD1, a triterpene-modifying cytochrome P450 SAD2, and the serine carboxypeptidase-like acyl transferase SAD7), which form part of a biosynthetic gene cluster. Here, we identify a fourth member of this gene cluster encoding a GT belonging to clade L of family 1 (UGT74H5), and show that this enzyme is an N-methylanthranilic acid O-glucosyltransferase implicated in the synthesis of avenacin A-1. Two other closely related family 1 GTs (UGT74H6 and UGT74H7) are also expressed in oat roots. One of these (UGT74H6) is able to glucosylate both N-methylanthranilic acid and benzoic acid, whereas the function of the other (UGT74H7) remains unknown. Our investigations indicate that UGT74H5 is likely to be key for the generation of the activated acyl donor used by SAD7 in the synthesis of the major avenacin, A-1, whereas UGT74H6 may contribute to the synthesis of other forms of avenacin that are acylated with benzoic acid. PMID:23258535

  15. Glycosyltransferases from oat (Avena) implicated in the acylation of avenacins.

    Science.gov (United States)

    Owatworakit, Amorn; Townsend, Belinda; Louveau, Thomas; Jenner, Helen; Rejzek, Martin; Hughes, Richard K; Saalbach, Gerhard; Qi, Xiaoquan; Bakht, Saleha; Roy, Abhijeet Deb; Mugford, Sam T; Goss, Rebecca J M; Field, Robert A; Osbourn, Anne

    2013-02-08

    Plants produce a huge array of specialized metabolites that have important functions in defense against biotic and abiotic stresses. Many of these compounds are glycosylated by family 1 glycosyltransferases (GTs). Oats (Avena spp.) make root-derived antimicrobial triterpenes (avenacins) that provide protection against soil-borne diseases. The ability to synthesize avenacins has evolved since the divergence of oats from other cereals and grasses. The major avenacin, A-1, is acylated with N-methylanthranilic acid. Previously, we have cloned and characterized three genes for avenacin synthesis (for the triterpene synthase SAD1, a triterpene-modifying cytochrome P450 SAD2, and the serine carboxypeptidase-like acyl transferase SAD7), which form part of a biosynthetic gene cluster. Here, we identify a fourth member of this gene cluster encoding a GT belonging to clade L of family 1 (UGT74H5), and show that this enzyme is an N-methylanthranilic acid O-glucosyltransferase implicated in the synthesis of avenacin A-1. Two other closely related family 1 GTs (UGT74H6 and UGT74H7) are also expressed in oat roots. One of these (UGT74H6) is able to glucosylate both N-methylanthranilic acid and benzoic acid, whereas the function of the other (UGT74H7) remains unknown. Our investigations indicate that UGT74H5 is likely to be key for the generation of the activated acyl donor used by SAD7 in the synthesis of the major avenacin, A-1, whereas UGT74H6 may contribute to the synthesis of other forms of avenacin that are acylated with benzoic acid.

  16. Auxin-induced growth of Avena coleoptiles involves two mechanisms with different pH optima

    Science.gov (United States)

    Cleland, R. E.

    1992-01-01

    Although rapid auxin-induced growth of coleoptile sections can persist for at least 18 hours, acid-induced growth lasts for a much shorter period of time. Three theories have been proposed to explain this difference in persistence. To distinguish between these theories, the pH dependence for auxin-induced growth of oat (Avena sativa L.) coleoptiles has been determined early and late in the elongation process. Coleoptile sections from which the outer epidermis was removed to facilitate buffer entry were incubated, with or without 10 micromolar indoleacetic acid, in 20 millimolar buffers at pH 4.5 to 7.0 to maintain a fixed wall pH. During the first 1 to 2 hours after addition of auxin, elongation occurs by acid-induced extension (i.e. the pH optimum is Auxin causes no additional elongation because the buffers prevent further changes in wall pH. After 60 to 90 minutes, a second mechanism of auxin-induced growth, whose pH optimum is 5.5 to 6.0, predominates. It is proposed that rapid growth responses to changes in auxin concentration are mediated by auxin-induced changes in wall pH, whereas the prolonged, steady-state growth rate is controlled by a second, auxin-mediated process whose pH optimum is less acidic.

  17. Auxin-induced growth of Avena coleoptiles involves two mechanisms with different pH optima

    Science.gov (United States)

    Cleland, R. E.

    1992-01-01

    Although rapid auxin-induced growth of coleoptile sections can persist for at least 18 hours, acid-induced growth lasts for a much shorter period of time. Three theories have been proposed to explain this difference in persistence. To distinguish between these theories, the pH dependence for auxin-induced growth of oat (Avena sativa L.) coleoptiles has been determined early and late in the elongation process. Coleoptile sections from which the outer epidermis was removed to facilitate buffer entry were incubated, with or without 10 micromolar indoleacetic acid, in 20 millimolar buffers at pH 4.5 to 7.0 to maintain a fixed wall pH. During the first 1 to 2 hours after addition of auxin, elongation occurs by acid-induced extension (i.e. the pH optimum is <5 and the elongation varies inversely with the solution pH). Auxin causes no additional elongation because the buffers prevent further changes in wall pH. After 60 to 90 minutes, a second mechanism of auxin-induced growth, whose pH optimum is 5.5 to 6.0, predominates. It is proposed that rapid growth responses to changes in auxin concentration are mediated by auxin-induced changes in wall pH, whereas the prolonged, steady-state growth rate is controlled by a second, auxin-mediated process whose pH optimum is less acidic.

  18. Multilocus sequence typing reveals two evolutionary lineages of Acidovorax avenae subsp. citrulli.

    Science.gov (United States)

    Feng, Jianjun; Schuenzel, Erin L; Li, Jianqiang; Schaad, Norman W

    2009-08-01

    Acidovorax avenae subsp. citrulli, causal agent of bacterial fruit blotch, has caused considerable damage to the watermelon and melon industry in China and the United States. Understanding the emergence and spread of this pathogen is important for controlling the disease. To build a fingerprinting database for reliable identification and tracking of strains of A. avenae subsp. citrulli, a multilocus sequence typing (MLST) scheme was developed using seven conserved loci. The study included 8 original strains from the 1978 description of A. avenae subsp. citrulli, 51 from China, and 34 from worldwide collections. Two major clonal complexes (CCs), CC1 and CC2, were identified within A. avenae subsp. citrulli; 48 strains typed as CC1 and 45 as CC2. All eight original 1978 strains isolated from watermelon and melon grouped in CC1. CC2 strains were predominant in the worldwide collection and all but five were isolated from watermelon. In China, a major seed producer for melon and watermelon, the predominant strains were CC1 and were found nearly equally on melon and watermelon.

  19. Avena strigosa Schreb. in agrocoenoses of the Podlaski Przełom Bugu mesoregion

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    Janina Skrzyczyńska

    2012-12-01

    Full Text Available The research on the localities of Avena strigosa and on its increased occurrence in agricultural crops of the Podlaski Przełom Bugu was carried out in 1994-1998. The documentation of this research consists of 600 phytosociological relevés and the floristic records. The paper presents the composition and structure of the field plant communities where Avena strigosa was found. It occurs frequently on various soil types of the Podlaski Przełom Bugu. However, on the area examined it was found just in small numbers, covering up to 5% of the area, while in the eastern part of the area an increase in its occurrence was observed. In the area of the Podlaski Przełom Bugu Avena strigosa occurred in spring cereals in the communities of Arnoserido-Scleranthetum and Vicietum tetraspermae as well as in the poor field communities, with the character species of Aperion spicae-venti and Panico-Setarion. Additionally, Avena strigosa was also found in the field communities of root crops belonging to Panico-Setarion alliance; however, it was present there just in small numbers.

  20. The origin of the C-genome and cytoplasm of Avena polyploids.

    Science.gov (United States)

    Nikoloudakis, N; Katsiotis, A

    2008-07-01

    The contribution of C-genome diploid species to the evolution of polyploid oats was studied using C-genome ITS-specific primers. SCAR analysis among Avena accessions confirmed the presence of C-genome ITS1-5.8S-ITS2 sequences in the genome of AACC and AACCDD polyploids. In situ hybridization and screening of more than a thousand rRNA clones in Avena polyploid species containing the C-genome revealed substantial C-genome rRNA sequence elimination. C-genome clones sequenced and Maximum Likelihood Parsimony analysis revealed close proximity to Avena ventricosa ITS1-5.8S-ITS2 sequences, providing strong evidence of the latter's active role in the evolution of tetraploid and hexaploid oats. In addition, cloning and sequencing of the chloroplastic trnL intron among the most representative Avena species verified the maternal origin of A-genome for the AACC interspecific hybrid formation, which was the genetic bridge for the establishment of cultivated hexaploid oats.

  1. Pronóstico productivo de la avena forrajera de temporal por efecto del cambio climático en el noroeste de Chihuahua, México

    Directory of Open Access Journals (Sweden)

    Daniel Villazón Bustillos

    2017-01-01

    Full Text Available El cambio climático puede afectar la productividad de los cultivos en una región determinada. El objetivo fue identificar la variabilidad en la producción de avena forrajera ( Avena sativa L. de temporal utilizando una función estocástica y analizar sus relaciones con la temperatura y precipitación, ante escenarios de cambio climático en la región noroeste de Chihuahua, México. Se obtuvo información estadística de 13 años (2001 - 2013 en las estaciones meteorológicas de los municipios de Bachíniva y Namiquipa utilizando la información de julio, agosto y septiembre, en cuyo periodo se concentra alrededor del 80% de la precipitación anual. Se tomó información del modelo HadCM3 (Modelo acoplado del Centro Hadley versión 3, 2001 que describe el comportamiento de variables climáticas bajo escenarios de emisión de contaminantes A2 y B2 para los años 2050 y 2080. Los cambios en las variables climáticas en el corto plazo (2050 se esperan con un aumento tanto en la temperatur a como en la precipitación, lo que permite en el caso de Bachíniva mejorar la producción de avena de 3.57 t/ha a 8.11 t/ha bajo en escenario de emisión de contaminantes A2. A largo plazo (2080 se espera un incremento permanente en la temperatura y sin imp ortar que tanto mejore la precipitación, esto provocara que en las actuales regiones productoras de avena no se logren desarrollar los cultivos para su cosecha.

  2. Genome Sequence of Acidovorax avenae Strain T10_61 Associated with Sugarcane Red Stripe in Argentina

    Science.gov (United States)

    Fontana, Cecilia A.; Bassi, Daniela; Puglisi, Edoardo; Salazar, Sergio M.; Vignolo, Graciela M.; Coccocelli, Pier S.

    2016-01-01

    Red stripe of sugarcane in Argentina is a bacterial disease caused by Acidovorax avenae. The genome sequence from the first isolate of this bacterium in Argentina is presented here. The draft genome of the A. avenae T10_61 strain contains 5,646,552 bp and has a G+C content of 68.6 mol%. PMID:26847889

  3. Mechanisms and Characterization of Trichoderma longibrachiatum T6 in Suppressing Nematodes (Heterodera avenae in Wheat

    Directory of Open Access Journals (Sweden)

    Shuwu Zhang

    2017-09-01

    Full Text Available Heterodera avenae is an important soil-borne pathogen that affects field crops worldwide. Chemical nematicides can be used to control the nematode, but they bring toxicity to the environment and human. Trichoderma longibrachiatum has been shown to have the ability to control H. avenae cysts, but detailed microscopic observations and bioassays are lacking. In this study, we used microscopic observations and bioassays to study the effect of T. longibrachiatum T6 (TL6 on the eggs and second stage juveniles (J2s of H. avenae, and investigate the role of TL6 in inducing the resistance to H. avenae in wheat seedling at physiological and biochemical levels. Microscopic observations recorded that TL6 parasitized on the H. avenae eggs, germinated, and produced a large number of hyphae on the eggs surface at the initial stage, thereafter, the eggs were completely surrounded by dense mycelia and the contents of eggs were lysed at the late stage. Meanwhile, the conidia suspension of TL6 parasitized on the surface of J2s, produced a large number of hyphae that penetrated the cuticle and caused deformation of the nematodes. TL6 at the concentration of 1.5 × 107 conidia ml−1 had the highest rates of parasitism on eggs and J2s, reflected by the highest hatching-inhibition of eggs and the mortality of J2s. In the greenhouse experiments, wheat seedlings treated with TL6 at 1.5 × 107 conidia ml−1 had reduced H. avenae infection, and increased plant growth significantly compared to the control. The cysts and juveniles in soil were reduced by 89.8 and 92.7%, the juveniles and females in roots were reduced by 88.3 and 91.3%, whereas the activity of chitinase and β-1, 3-glucanase, total flavonoids and lignin contents in wheat roots were increased significantly at different stage after inoculation with the eggs and TL6 conidia in comparison to the control. Maximum activity of chitinase and β-1, 3-glucanase were recorded at the 20th and 15th Days after

  4. Uso de inoculante y fertilización nitrogenada en la producción de forraje de avena, ballico y trigo

    OpenAIRE

    Regina Carrillo Romo; Mario H. Esqueda Coronado; Alma Delia Báez González; Gerardo Reyes López; Mario H. Royo Márquez; José Luis Ibave González

    2010-01-01

    Los objetivos fueron evaluar el efecto combinado de diferentes dosis de inoculante (Rhodococcus fascians) y fertilización nitrogenada en la producción de forraje de gramíneas así como la relación costo/beneficio. Las gramíneas fueron, Avena sativa L, Lolium multiflorum Lam yTriticum durum L con los siguientes tratamientos, inoculación, fertilización nitrogenada (0, 30, 60 kg N ha-1), y la combinación de inoculante y fertilización. Las especies se establecieron en condiciones de riego en un su...

  5. Control de avena negra (Avena fatua L.) con aplicación de trifluralina en cultivos de cebada cervecera (Hordeum vulgare L.)

    OpenAIRE

    Scursoni, Julio Alejandro

    2006-01-01

    p.149-156 Con el objetivo de estudiar los efectos de la trifluraina en: (i) el control de avena negra y (ii) el establecimiento y rendimiento de cultivares de cebada, se realizaron dos experimentos de campo y dos en condiciones controladas. A campo, se evaluaron tres dosis del herbicida trifluraina (576, 768 y 1.056 g i.a/ha) en el cultivar Quilmes Alfa y el efecto de una sola dosis (528 g i.a/ha) en diferentes sistemas de siembra y dosis de fertilización fosforada, en los cultivares Q.Alf...

  6. The Low Temperature Induced Physiological Responses of Avena nuda L., a Cold-Tolerant Plant Species

    Directory of Open Access Journals (Sweden)

    Wenying Liu

    2013-01-01

    Full Text Available The paperaim of the was to study the effect of low temperature stress on Avena nuda L. seedlings. Cold stress leads to many changes of physiological indices, such as membrane permeability, free proline content, malondialdehyde (MDA content, and chlorophyll content. Cold stress also leads to changes of some protected enzymes such as peroxidase (POD, superoxide dismutase (SOD, and catalase (CAT. We have measured and compared these indices of seedling leaves under low temperature and normal temperature. The proline and MDA contents were increased compared with control; the chlorophyll content gradually decreased with the prolongation of low temperature stress. The activities of SOD, POD, and CAT were increased under low temperature. The study was designated to explore the physiological mechanism of cold tolerance in naked oats for the first time and also provided theoretical basis for cultivation and antibiotic breeding in Avena nuda L.

  7. Targeting sources of drought tolerance within an Avena spp. collection through multivariate approaches.

    Science.gov (United States)

    Sánchez-Martín, Javier; Mur, Luis A J; Rubiales, Diego; Prats, Elena

    2012-11-01

    In this study, we find and characterize the sources of tolerance to drought amongst an oat (Avena sativa L.) germplasm collection of 174 landraces and cultivars. We used multivariate analysis, non-supervised principal component analyses (PCA) and supervised discriminant function analyses (DFA) to suggest the key mechanism/s responsible for coping with drought stress. Following initial assessment of drought symptoms and area under the drought progress curve, a subset of 14 accessions were selected for further analysis. The collection was assessed for relative water content (RWC), cell membrane stability, stomatal conductance (g (1)), leaf temperature, water use efficiency (WUE), lipid peroxidation, lipoxygenase activity, chlorophyll levels and antioxidant capacity during a drought time course experiment. Without the use of multivariate approaches, it proved difficult to unequivocally link drought tolerance to specific physiological processes in the different resistant oat accessions. These approaches allowed the ranking of many supposed drought tolerance traits in the order of degree of importance within this crop, thereby highlighting those with a causal relationship to drought stress tolerance. Analyses of the loading vectors used to derive the PCA and DFA models indicated that two traits involved in water relations, temperature and RWC together with the area of drought curves, were important indicators of drought tolerance. However, other parameters involved in water use such as g (1) and WUE were less able to discriminate between the accessions. These observations validate our approach which should be seen as representing a cost-effective initial screen that could be subsequently employed to target drought tolerance in segregating populations.

  8. Resistance to Puccinia graminis f. sp. avenae in Barley Is Associated with the Rpg5 Locus.

    Science.gov (United States)

    Dracatos, Peter; Singh, Davinder; Fetch, Tom; Park, Robert

    2015-04-01

    In barley, gene Rpg5 was first identified for providing resistance to the rye stem rust pathogen (Puccinia graminis f. sp. secalis). A subsequent study determined that Rpg5 is required for rpg4-mediated resistance to the wheat stem rust pathogen (P. graminis f. sp. tritici) including pathotype TTKSK ("Ug99"), which poses a major threat to global wheat and barley production. Based on the effectiveness of Rpg5 against P. graminis f. sp. tritici and P. graminis f. sp. secalis, we assessed whether it also conferred resistance to the oat stem rust pathogen (P. graminis f. sp. avenae). A barley F8 recombinant inbred line (RIL) population was produced by crossing 'Q21861' (Rpg1 and Rpg5) with '73-G1' (Rpg1), which is susceptible to P. graminis f. sp. avenae, P. graminis f. sp. secalis, and some pathotypes of P. graminis f. sp. tritici. Seedling tests were performed on the F8 RIL population using Australian pathotypes of P. graminis f. sp. tritici, P. graminis f. sp. secalis, P. graminis f. sp. avenae, and a putative somatic hybrid between P. graminis f. sp. tritici and P. graminis f. sp. secalis known as the 'Scabrum' rust. Segregation in the responses to all rust isolates for the RILs was identical (50 resistant: 52 susceptible), and fitted a 1:1 ratio (X2=0.039, P=0.843), indicating that resistance to all isolates was monogenetically inherited. Screening of the RILs and the parental lines with perfect markers for the functional Rpg1 and Rpg5 resistance alleles indicated that Rpg1 was fixed, while Rpg5 was positive in all resistant lines and negative in all susceptible lines. This suggests that different formae speciales of P. graminis may share common effectors, and that the Rpg5 locus confers resistance to both P. graminis f. sp. tritici and P. graminis f. sp. secalis and the heterologous formae speciales of P. graminis, P. graminis f. sp. avenae.

  9. Potential Host Manipulation by the Aphid Parasitoid Aphidius avenae to Enhance Cold Tolerance

    Science.gov (United States)

    Alford, Lucy; Androdias, Annabelle; Franco, Thomas; Pierre, Jean-Sébastien; Burel, Françoise; van Baaren, Joan

    2016-01-01

    During parasitoid development, the immature parasitoid is confined to the host species. As a result, any potential to modify the physiology or behaviour of the host could play an important role in parasitoid fitness. The potential for host manipulation by the aphid parasitoid Aphidius avenae to increase cold thermotolerance was investigated using the aphid host species Metopolophium dirhodum and Sitobion avenae. Aphids were parasitized at L3/L4 instar stage (5 d old) and allowed to develop into pre-reproductive adults (10 d old) containing a 5 d old parasitoid larva. A control group was created of non-parasitized pre-reproductive adults (10 d old). The inherent physiological thermotolerance (LT50) and potential behavioural thermoregulation (behaviour in a declining temperature regime) of parasitized and non-parasitized aphids were investigated. Results revealed no effect of parasitism on the physiological thermotolerance of S. avenae and M. dirhodum. Significant differences in the behaviour of parasitized and non-parasitized aphids were observed, in addition to differences between host species, and such behaviours are discussed in view of the potential for host manipulation. PMID:28006018

  10. Unravelling mycorrhiza-induced wheat susceptibility to the English grain aphid Sitobion avenae

    Science.gov (United States)

    Simon, Amma L.; Wellham, Peter A. D.; Aradottir, Gudbjorg I.; Gange, Alan C.

    2017-04-01

    Arbuscular mycorrhizal (AM) fungi are root symbionts that can increase or decrease aphid growth rates and reproduction, but the reason by which this happens is unknown. To investigate the underlying mechanisms of this interaction, we examined the effect of AM fungi on the English Grain aphid (Sitobion avenae) development, reproduction, attraction, settlement and feeding behaviour on two naturally susceptible varieties Triticum aestivum (L.) variety Solstice and T. monococcum MDR037, and two naturally resistant lines, T. monococcum MDR045 and MDR049. Mycorrhizal colonisation increased the attractiveness of T. aestivum var. Solstice to aphids, but there was no effect on aphid development on this variety. Using the Electrical Penetration Graph (EPG) technique, we found that mycorrhizal colonisation increased aphid phloem feeding on T. monococcum MDR037 and MDR045, colonisation also increased growth rate and reproductive success of S. avenae on these varieties. Mycorrhizas increased vascular bundle size, demonstrating that these fungi can influence plant anatomy. We discuss if and how this could be related to an enhanced success rate in phloem feeding in two varieties. Overall, we present and discuss how mycorrhizal fungi can affect the feeding behaviour of S. avenae in wheat, inducing susceptibility in a resistant variety.

  11. Potential Host Manipulation by the Aphid Parasitoid Aphidius avenae to Enhance Cold Tolerance.

    Directory of Open Access Journals (Sweden)

    Lucy Alford

    Full Text Available During parasitoid development, the immature parasitoid is confined to the host species. As a result, any potential to modify the physiology or behaviour of the host could play an important role in parasitoid fitness. The potential for host manipulation by the aphid parasitoid Aphidius avenae to increase cold thermotolerance was investigated using the aphid host species Metopolophium dirhodum and Sitobion avenae. Aphids were parasitized at L3/L4 instar stage (5 d old and allowed to develop into pre-reproductive adults (10 d old containing a 5 d old parasitoid larva. A control group was created of non-parasitized pre-reproductive adults (10 d old. The inherent physiological thermotolerance (LT50 and potential behavioural thermoregulation (behaviour in a declining temperature regime of parasitized and non-parasitized aphids were investigated. Results revealed no effect of parasitism on the physiological thermotolerance of S. avenae and M. dirhodum. Significant differences in the behaviour of parasitized and non-parasitized aphids were observed, in addition to differences between host species, and such behaviours are discussed in view of the potential for host manipulation.

  12. Potential Host Manipulation by the Aphid Parasitoid Aphidius avenae to Enhance Cold Tolerance.

    Science.gov (United States)

    Alford, Lucy; Androdias, Annabelle; Franco, Thomas; Pierre, Jean-Sébastien; Burel, Françoise; van Baaren, Joan

    2016-01-01

    During parasitoid development, the immature parasitoid is confined to the host species. As a result, any potential to modify the physiology or behaviour of the host could play an important role in parasitoid fitness. The potential for host manipulation by the aphid parasitoid Aphidius avenae to increase cold thermotolerance was investigated using the aphid host species Metopolophium dirhodum and Sitobion avenae. Aphids were parasitized at L3/L4 instar stage (5 d old) and allowed to develop into pre-reproductive adults (10 d old) containing a 5 d old parasitoid larva. A control group was created of non-parasitized pre-reproductive adults (10 d old). The inherent physiological thermotolerance (LT50) and potential behavioural thermoregulation (behaviour in a declining temperature regime) of parasitized and non-parasitized aphids were investigated. Results revealed no effect of parasitism on the physiological thermotolerance of S. avenae and M. dirhodum. Significant differences in the behaviour of parasitized and non-parasitized aphids were observed, in addition to differences between host species, and such behaviours are discussed in view of the potential for host manipulation.

  13. New insights into virulence mechanisms of rice pathogen Acidovorax avenae subsp. avenae strain RS-1 following exposure to ß-lactam antibiotics.

    Science.gov (United States)

    Li, Bin; Ge, Mengyu; Zhang, Yang; Wang, Li; Ibrahim, Muhammad; Wang, Yanli; Sun, Guochang; Chen, Gongyou

    2016-02-26

    Recent research has shown that pathogen virulence can be altered by exposure to antibiotics, even when the growth rate is unaffected. Investigating this phenomenon provides new insights into understanding the virulence mechanisms of bacterial pathogens. This study investigates the phenotypic and transcriptomic responses of the rice pathogenic bacterium Acidovorax avenae subsp. avenae (Aaa) strain RS-1 to ß-lactam antibiotics especially Ampicillin (Amp). Our results indicate that exposure to Amp does not influence bacterial growth and biofilm formation, but alters the virulence, colonization capacity, composition of extracellular polymeric substances and secretion of Type VI secretion system (T6SS) effector Hcp. This attenuation in virulence is linked to unique or differential expression of known virulence-associated genes based on genome-wide transcriptomic analysis. The reliability of expression data generated by RNA-Seq was verified with quantitative real-time PCR of 21 selected T6SS genes, where significant down-regulation in expression of hcp gene, corresponding to the reduction in secretion of Hcp, was observed under exposure to Amp. Hcp is highlighted as a potential target for Amp, with similar changes observed in virulence-associated phenotypes between exposure to Amp and mutation of hcp gene. In addition, Hcp secretion is reduced in knockout mutants of 4 differentially expressed T6SS genes.

  14. [Comparative analysis of diploid species of Avena l. using cytogenetic and biochemical markers: Avena canariensis baum et fedak and A. longiglumis dur].

    Science.gov (United States)

    Shelukhina, O Iu; Badaeva, E D; Brezhneva, T A; Loskutov, I G; Pukhal'skiĭ, V A

    2008-06-01

    The diploid oat species containing the A genome of two types (Al and Ac) were studied by electrophoresis of grain storage proteins (avenins), chromosome C-banding, and in situ hybridization with probes pTa71 and pTa794. The karyotypes of the studied species displayed similar C-banding patterns but differed in size and morphology of several chromosomes, presumably, resulting from structural rearrangements that took place during the divergence of A genomes from a common ancestor. In situ hybridization demonstrated an identical location of the 45S and 5S rRNA gene loci in Avena canariensis and A. longiglumis similar to that in the A. strigosa genome. However, the 5S rDNA locus in A. longiglumis (5S rDNA1) was considerably decreased in the chromosome 3A1 long arm. The analysis demonstrated that these oat species were similar in the avenin component composition, although individual accessions differed in the electrophoretic mobilities of certain components. A considerable similarity of A. canariensis and A. longiglumis to the Avena diploid species carrying the As genome variant was demonstrated.

  15. Resistance of Wheat Accessions to the English Grain Aphid Sitobion avenae

    Science.gov (United States)

    Hu, Xiang-Shun; Liu, Ying-Jie; Wang, Yu-Han; Wang, Zhe; Yu, Xin-lin; Wang, Bo; Zhang, Gai-Sheng; Liu, Xiao-Feng; Hu, Zu-Qing; Zhao, Hui-Yan; Liu, Tong-Xian

    2016-01-01

    The English grain aphid, Sitobion avenae, is a major pest species of wheat crops; however, certain varieties may have stronger resistance to infestation than others. Here, we investigated 3 classical resistance mechanisms (antixenosis, antibiosis, and tolerance) by 14 wheat varieties/lines to S. avenae under laboratory and field conditions. Under laboratory conditions, alatae given the choice between 2 wheat varieties, strongly discriminated against certain varieties. Specifically, the ‘Amigo’ variety had the lowest palatability to S. avenae alatae of all varieties. ‘Tm’ (Triticum monococcum), ‘Astron,’ ‘Xanthus,’ ‘Ww2730,’ and ‘Batis’ varieties also had lower palatability than other varieties. Thus, these accessions may use antibiosis as the resistant mechanism. In contrast, under field conditions, there were no significant differences in the number of alatae detected on the 14 wheat varieties. One synthetic line (98-10-30, a cross between of Triticum aestivum (var. Chris) and Triticum turgidum (var. durum) hybridization) had low aphid numbers but high yield loss, indicating that it has high antibiosis, but poor tolerance. In comparison, ‘Amigo,’ ‘Xiaoyan22,’ and some ‘186Tm’ samples had high aphid numbers but low yield loss rates, indicating they have low antibiosis, but good tolerance. Aphid population size and wheat yield loss rates greatly varied in different fields and years for ‘98-10-35,’ ‘Xiaoyan22,’ ‘Tp,’ ‘Tam200,’ ‘PI high,’ and other ‘186Tm’ samples, which were hybrid offspring of T. aestivum and wheat related species. Thus, these germplasm should be considered for use in future studies. Overall, S. avenae is best adapted to ‘Xinong1376,’ because it was the most palatable variety, with the greatest yield loss rates of all 14 wheat varieties. However, individual varieties/lines influenced aphid populations differently in different years. Therefore, we strongly recommend a combination of

  16. De novo assembly and phasing of dikaryotic genomes from two isolates of Puccini coronata f. sp. avenae, the causal agent of oat crown rust

    Science.gov (United States)

    Marisa E. Miller; Ying Zhang; Vahid Omidvar; Jana Sperschneider; Benjamin Schwessinger; Castle Raley; Jonathan M. Palmer; Diana Garnica; Narayana Upadhyaya; John Rathjen; Jennifer M. Taylor; Robert F. Park; Peter N. Dodds; Cory D. Hirsch; Shahryar F. Kianian; Melania. Figueroa

    2018-01-01

    Oat crown rust, caused by the fungus Pucinnia coronata f. sp. avenae, is a devastating disease that impacts worldwide oat production. For much of its life cycle, P. coronata f. sp. avenae is dikaryotic, with two separate haploid nuclei that may vary in virulence genotype, highlighting...

  17. Identification, introgression, and molecular marker genetic analysis and selection of a highly effective novel oat crown rust resistance from diploid oat, Avena strigosa

    Science.gov (United States)

    A new highly effective resistance to oat crown rust (Puccinia coronata f. sp. avenae) was identified in the diploid oat Avena strigosa PI 258731 and introgressed into hexaploid cultivated oat. Young plants with this resistance show moderate susceptibility, whereas older plant tissues and adult plant...

  18. Type IV Pili are required for virulence, twitching motility, and biofilm formation of acidovorax avenae subsp. Citrulli.

    Science.gov (United States)

    Bahar, Ofir; Goffer, Tal; Burdman, Saul

    2009-08-01

    Acidovorax avenae subsp. citrulli is the causal agent of bacterial fruit blotch (BFB), a threatening disease of watermelon, melon, and other cucurbits. Despite the economic importance of BFB, relatively little is known about basic aspects of the pathogen's biology and the molecular basis of its interaction with host plants. To identify A. avenae subsp. citrulli genes associated with pathogenicity, we generated a transposon (Tn5) mutant library on the background of strain M6, a group I strain of A. avenae subsp. citrulli, and screened it for reduced virulence by seed-transmission assays with melon. Here, we report the identification of a Tn5 mutant with reduced virulence that is impaired in pilM, which encodes a protein involved in assembly of type IV pili (TFP). Further characterization of this mutant revealed that A. avenae subsp. citrulli requires TFP for twitching motility and wild-type levels of biofilm formation. Significant reductions in virulence and biofilm formation as well as abolishment of twitching were also observed in insertional mutants affected in other TFP genes. We also provide the first evidence that group I strains of A. avenae subsp. citrulli can colonize and move through host xylem vessels.

  19. [Genomic structure of the autotetraploid oat species Avena macrostachya inferred from comparative analysis of the ITS1 and ITS2 sequences: on the oat karyotype evolution during the early stages of the Avena species divergence].

    Science.gov (United States)

    Rodionov, A V; Tiupa, N B; Kim, E S; Machs, E M; Loskutov, I G

    2005-05-01

    To examine the genomic structure of Avena macrostachya, internal transcribed spacers, ITS1 and ITS2, as well as nuclear 5.8S tRNA genes from three oat species with AsAs karyotype (A. wiestii, A. hirtula, and A. atlantica), and those from A. longiglumis (AlAl), A. canariensis (AcAc), A. ventricosa (CvCv), A. pilosa, and A. clauda (CpCp) were sequenced. All species of the genus Avena examined represented a monophyletic group (bootstrap index = 98), within which two branches, i.e., species with A- and C-genomes, were distinguished (bootstrap indices = 100). The subject of our study, A. macrostachya, albeit belonging to the phylogenetic branch of C-genome oat species (karyotype with submetacentic and subacrocentric chromosomes), has preserved an isobrachyal karyotype, (i.e., that containing metacentric chromosomes), probably typical of the common Avena ancestor. It was suggested to classify the A. macrostachya genome as a specific form of C-genome, Cm-genome. Among the species from other genera studied, Arrhenatherum elatius was found to be the closest to Avena in ITS1 and ITS structure. Phylogenetic relationships between Avena and Helictotrichon remain intriguingly uncertain. The HPR389153 sequence from H. pratense genome was closest to the ITS1 sequences specific to the Avena A-genomes (p-distance = 0.0237), while the differences of this sequence from the ITS1 of A. macrostachya reached 0.1221. On the other hand, HAD389117 from H. adsurgens was close to the ITS1 specific to Avena C-genomes (p-distance = 0.0189), while its differences from the A-genome specific ITS1 sequences reached 0.1221. It seems likely that the appearance of highly polyploid (2n = 12-21x) species of H. pratense and H. adsurgens could be associated with interspecific hybridization involving Mediterranean oat species carrying A- and C-genomes. A hypothesis on the pathways of Avena chromosomes evolution during the early stages the oat species divergence is proposed.

  20. Relationship between water soluble carbohydrate content, aphid endosymbionts and clonal performance of Sitobion avenae on cocksfoot cultivars.

    Directory of Open Access Journals (Sweden)

    Hussein Alkhedir

    Full Text Available Aphids feed on plant phloem sap, rich in sugars but poor in essential amino acids. However, sugars cause osmotic regulation problems for aphids, which they overcome by hydrolysing the sugars in their gut and polymerising the hydrolysis products into oligosaccharides, excreted with honeydew. Aphids harbour primary bacterial endosymbionts, which supply them with essential amino acids necessary for survival. They also harbour secondary (facultative endosymbionts (sfS, some of which have a positive impact on life history traits, although it is not yet known whether they also play a role in providing effective tolerance to differing levels of water soluble carbohydrates (WSCs. We investigated the relationship between WSC content of cocksfoot cultivars and performance of clones of the English grain aphid Sitobion avenae F. We evaluated how clone genotype and their sfS modulate performance on these different cultivars. We therefore examined the performance of genetically defined clones of S. avenae, collected from different host plants, harbouring different sfS. The performance was tested on 10 Dactylis glomerata L. cultivars with varying WSC content. D. glomerata is known as a wild host plant for S. avenae and is also commercially planted. We found that high WSCs levels are responsible for the resistance of D. glomerata cultivars to specific S. avenae clones. The minimum level of WSCs conferring resistance to D. glomerata cultivars was 1.7% dw. Cultivars with a WSC content of 2.2% or higher were resistant to S. avenae and did not allow reproduction. Our results further indicate that sfS modulate to some extend host plant cultivar adaptation in S. avenae. This is the first study revealing the importance of WSCs for aphid performance. Cocksfoot cultivars with a high content of WSCs might be therefore considered for aphid control or used for resistance breeding in this and other grass species, including cereals.

  1. Role of the Genes of Type VI Secretion System in Virulence of Rice Bacterial Brown Stripe Pathogen Acidovorax avenae subsp. avenae Strain RS-2

    Directory of Open Access Journals (Sweden)

    Md. Mahidul Islam Masum

    2017-09-01

    Full Text Available The Type VI secretion system (T6SS is a class of macromolecular machine that is required for the virulence of gram-negative bacteria. However, it is still not clear what the role of T6SS in the virulence of rice bacterial brown stripe pathogen Acidovorax avenae subsp. avenae (Aaa is. The aim of the current study was to investigate the contribution of T6SS in Aaa strain RS2 virulence using insertional deletion mutation and complementation approaches. This strain produced weak virulence but contains a complete T6SS gene cluster based on a genome-wide analysis. Here we compared the virulence-related phenotypes between the wild-type (RS-2 and 25 T6SS mutants, which were constructed using homologous recombination methods. The mutation of 15 T6SS genes significantly reduced bacterial virulence and the secretion of Hcp protein. Additionally, the complemented 7 mutations ΔpppA, ΔclpB, Δhcp, ΔdotU, ΔicmF, ΔimpJ, and ΔimpM caused similar virulence characteristics as RS-2. Moreover, the mutant ΔpppA, ΔclpB, ΔicmF, ΔimpJ and ΔimpM genes caused by a 38.3~56.4% reduction in biofilm formation while the mutants ΔpppA, ΔclpB, ΔicmF and Δhcp resulted in a 37.5~44.6% reduction in motility. All together, these results demonstrate that T6SS play vital roles in the virulence of strain RS-2, which may be partially attributed to the reductions in Hcp secretion, biofilm formation and motility. However, differences in virulence between strain RS-1 and RS-2 suggest that other factors may also be involved in the virulence of Aaa.

  2. Inhibitory effect and mode of action of chitosan solution against rice bacterial brown stripe pathogen Acidovorax avenae subsp. avenae RS-1.

    Science.gov (United States)

    Yang, Chunlan; Li, Bin; Ge, Mengyu; Zhou, Kaile; Wang, Yanli; Luo, Ju; Ibrahim, Muhammad; Xie, Guanlin; Sun, Guochang

    2014-06-04

    Inhibitory effect and mode of action of chitosan solution against rice bacterial brown stripe pathogen Acidovorax avenae subsp. avenae (Aaa) strain RS-1 was examined in this study. Result from this study indicated that chitosan solutions at 0.10, 0.20, and 0.40mg/mL inhibited the in vitro growth of Aaa strain RS-1, and in general the inhibitory efficiency increased with the increase of both chitosan concentration and the incubation time. Antibacterial activity of chitosan in this study may be mainly due to the damage of cell membrane, which was evidenced by both the cell lysis observed by transmission electron microscopy, and the increased release of cell materials based on the measurement of cell membrane integrity. Furthermore, chitosan solutions at concentrations of 0.1, 0.2, and 0.4mg/mL markedly inhibited bacterial biofilm formation compared to the control, and the inhibitory effect increased with the increase of chitosan concentration. In addition, quantitative real-time PCR of the 10 secretion system related genes revealed the differential expression of genes in particular ompA/motB, emphasizing the importance of this gene in the response of Aaa strain RS-1 to chitosan stress. These results indicated that the antibacterial mode of action of chitosan may be mainly due to membrane disruption and lysis, reduction of biofilm formation, and gene expression change. Overall, the results clearly indicated that chitosan had the potential to control bacterial brown stripe of rice. Copyright © 2014 Elsevier Ltd. All rights reserved.

  3. Role of the Genes of Type VI Secretion System in Virulence of Rice Bacterial Brown Stripe Pathogen Acidovorax avenae subsp. avenae Strain RS-2.

    Science.gov (United States)

    Masum, Md Mahidul Islam; Yang, Yingzi; Li, Bin; Olaitan, Ogunyemi Solabomi; Chen, Jie; Zhang, Yang; Fang, Yushi; Qiu, Wen; Wang, Yanli; Sun, Guochang

    2017-09-21

    The Type VI secretion system (T6SS) is a class of macromolecular machine that is required for the virulence of gram-negative bacteria. However, it is still not clear what the role of T6SS in the virulence of rice bacterial brown stripe pathogen Acidovorax avenae subsp. avenae (Aaa) is. The aim of the current study was to investigate the contribution of T6SS in Aaa strain RS2 virulence using insertional deletion mutation and complementation approaches. This strain produced weak virulence but contains a complete T6SS gene cluster based on a genome-wide analysis. Here we compared the virulence-related phenotypes between the wild-type (RS-2) and 25 T6SS mutants, which were constructed using homologous recombination methods. The mutation of 15 T6SS genes significantly reduced bacterial virulence and the secretion of Hcp protein. Additionally, the complemented 7 mutations Δ pppA , Δ clpB , Δ hcp , Δ dotU , Δ icmF , Δ impJ , and Δ impM caused similar virulence characteristics as RS-2. Moreover, the mutant Δ pppA , Δ clpB , Δ icmF , Δ impJ and Δ impM genes caused by a 38.3~56.4% reduction in biofilm formation while the mutants Δ pppA , Δ clpB , Δ icmF and Δ hcp resulted in a 37.5~44.6% reduction in motility. All together, these results demonstrate that T6SS play vital roles in the virulence of strain RS-2, which may be partially attributed to the reductions in Hcp secretion, biofilm formation and motility. However, differences in virulence between strain RS-1 and RS-2 suggest that other factors may also be involved in the virulence of Aaa.

  4. Cognition and the risk of eating disorders in Spanish adolescents: the AVENA and AFINOS studies.

    Science.gov (United States)

    Veses, A M; Gómez-Martínez, S; de Heredia, F Pérez; Esteban-Cornejo, I; Castillo, R; Estecha, S; García-Fuentes, M; Veiga, O L; Calle, M E; Marcos, A

    2015-02-01

    Eating disorders (ED) can arise from a combination of biological and psychological factors. Some studies suggest that intellectual factors might be important in the development of ED, although the evidence is still scarce. The aim of this study was to examine the association between cognition measurements (cognitive performance and academic achievement) and the risk of developing ED in adolescents considering their weight status. The sample consisted of 3,307 adolescents (1,756 girls), aged 13-18.5 years, who participated in the AVENA (n = 1,430; 783 girls) and AFINOS (n = 1,877; 973 girls) studies. Cognitive performance was measured by the TEA test in the AVENA study, and academic achievement was self-reported in the AFINOS study. ED risk was evaluated in both studies by using the SCOFF questionnaire. Body mass index was calculated to classify adolescents as non-overweight or overweight (including obesity). Overweight adolescents showed a higher risk of developing ED than non-overweight ones in both studies. In the AVENA study, overweight boys with low performance in reasoning ability showed increased risk of ED (p = 0.05). In the AFINOS study, overweight boys with low academic performance in physical education and non-overweight girls with low academic achievement in all the areas analyzed showed higher risk of ED than their peers (all p < 0.05). No association between cognitive performance and ED risk was found in adolescents, while academic achievement was associated with ED risk, especially in non-overweight girls. The non-cognitive traits that accompany academic achievement could influence the likelihood of developing ED in these girls.

  5. Anthropometric body fat composition reference values in Spanish adolescents. The AVENA Study.

    Science.gov (United States)

    Moreno, L A; Mesana, M I; González-Gross, M; Gil, C M; Fleta, J; Wärnberg, J; Ruiz, J R; Sarría, A; Marcos, A; Bueno, M

    2006-02-01

    To determine reference values for body mass index (BMI), sum of six skinfolds (sigma6 skinfolds) and body fat percentage (BF%) in Spanish adolescents aged 13-18 years, included in the AVENA Study (Alimentación y Valoración del Estado Nutricional en Adolescentes: Food and Assessment of the Nutritional Status of Adolescents). Multicentre cross-sectional study. Representative sample of Spanish adolescents. The population was selected by means of a multiplestep, simple random sampling. The final number of subjects included in the AVENA Study was 2859 adolescents; 2160 adolescents had a complete set of anthropometric measurements and were then included in this study (1109 males and 1051 females). Weight, height and six skinfold thicknesses were measured. As indices of total adiposity, we calculated BMI, summation sigma6 skinfolds and BF% with the formulas described by Slaughter et al. Sigma6 skinfolds and BF% in each age group were significantly higher in females than in males. In males, age showed a significant effect for BMI, sigma6 skinfolds and BF%; however, in females, the effect was only significant for BF%. The percentile distribution was more disperse towards higher sigma6 skinfolds and BF% values in males when compared with females. The presented percentile values will help us to classify adolescents in comparison with a well-established reference population, and to estimate the proportion of adolescents with high or low adiposity amounts. The AVENA-Study was supported by the Spanish Ministry of Health (FIS 00/0015), and grants from Panrico SA, Madaus SA and Procter and Gamble SA. This study was also supported by Instituto de Salud Carlos III (Spain), RCESP (C03/09) and Spanish Ministry of Education (AP2003-2128).

  6. A study on the genetic relationships of Avena taxa and the origins of hexaploid oat.

    Science.gov (United States)

    Chew, Paul; Meade, Kendra; Hayes, Alec; Harjes, Carlos; Bao, Yong; Beattie, Aaron D; Puddephat, Ian; Gusmini, Gabe; Tanksley, Steven D

    2016-07-01

    Using next-generation DNA sequencing, it was possible to clarify the genetic relationships of Avena species and deduce the likely pathway from which hexaploid oat was formed by sequential polyploidization events. A sequence-based diversity study was conducted on a representative sample of accessions from species in the genus Avena using genotyping-by-sequencing technology. The results show that all Avena taxa can be assigned to one of four major genetic clusters: Cluster 1 = all hexaploids including cultivated oat, Cluster 2 = AC genome tetraploids, Cluster 3 = C genome diploids, Cluster 4 = A genome diploid and tetraploids. No evidence was found for the existence of discrete B or D genomes. Through a series of experiments involving the creation of in silico polyploids, it was possible to deduce that hexaploid oat likely formed by the fusion of an ancestral diploid species from Cluster 3 (A. clauda, A. eriantha) with an ancestral diploid species from Cluster 4D (A. longiglumis, A. canariensis, A. wiestii) to create the ancestral tetraploid from Cluster 2 (A. magna, A. murphyi, A. insularis). Subsequently, that ancestral tetraploid fused again with another ancestral diploid from Cluster 4D to create hexaploid oat. Based on the geographic distribution of these species, it is hypothesized that both the tetraploidization and hexaploidization events may have occurred in the region of northwest Africa, followed by radiation of hexaploid oat to its current worldwide distribution. The results from this study shed light not only on the origins of this important grain crop, but also have implications for germplasm collection and utilization in oat breeding.

  7. Physical fitness, overweight and the risk of eating disorders in adolescents. The AVENA and AFINOS studies.

    Science.gov (United States)

    Veses, A M; Martínez-Gómez, D; Gómez-Martínez, S; Vicente-Rodriguez, G; Castillo, R; Ortega, F B; González-Gross, M; Calle, M E; Veiga, O L; Marcos, A

    2014-02-01

    What is already known about this subject Eating disorders are among the public health issues facing adolescents. An excess of body fat has been associated with an increased risk of these disorders. The association of physical fitness with eating disorders has not yet been analysed in adolescents. What this study adds This study confirms that the overweight and obesity increase the risk of developing eating disorders. The present study shows that there is an inverse association between physical fitness levels and the risk of eating disorders. This study suggests that physical fitness might attenuate the influence of overweight on the development of eating disorders in adolescents. Eating disorders together with the overweight and obesity are important health concerns in adolescents. To analyse the individual and combined influence of overweight and physical fitness on the risk of developing eating disorders in Spanish adolescents. The sample consisted of 3571 adolescents (1864 females), aged 13 to 18.5 years, from Spain who participated in the AVENA and AFINOS studies. The risk of eating disorders was evaluated using the SCOFF questionnaire. Body mass index was calculated and the adolescents were classified into two groups: overweight (including obesity) and non-overweight according to Cole's cut-off points. Cardiorespiratory fitness in the AVENA Study was assessed by the 20-m shuttle-run test and the overall physical fitness level was self-reported in the AFINOS Study. Overweight adolescents had a higher risk of developing eating disorders than non-overweight adolescents (odds ratio [OR] = 4.91, 95% confidence interval [CI]: 3.63-6.61 in the AVENA Study and OR = 2.45, 95% CI: 1.83-3.22 in the AFINOS Study). Also, adolescents with medium and low levels of physical fitness had a higher risk of developing eating disorders (OR = 1.51, 95% CI: 1.05-2.16, and OR = 2.25, 95% CI: 1.60-3.19, respectively, in the AVENA Study, and OR = 1.73, 95% CI: 1

  8. Interspecific Difference in Seed Germination of the Genus Avena, at Various Temperatures

    OpenAIRE

    Ogawa, Yukiyoshi; Tachibana, Shoji; 小川, 幸持; 橘, 昌司

    1997-01-01

    Germination of seeds in different diploid, tetraploid and hexaploid Avena species as affecbed by temperatures of 18°, 24° and 30℃ was examined. Most species of seeds stored for 5 to 6 months after harvesting showed the decrease in seed germination percentage as the temperature increased.The poor germination of seeds at 30℃ was attributed to secondary dormancy induced by exposing to a high temperature. The seeds became capable of germinating at the same temperature after having stored for 10 ...

  9. Interspecific Difference in α-Amylase Production by the Endosperm in the Genus Avena

    OpenAIRE

    Ogawa, Yukiyoshi; Tachibana, Shoji; 小川, 幸持; 橘, 昌司

    1997-01-01

    Seeds of different diploid, tetraploid and hexaploid Avena species, stored for eight to nine months after harvesting, were cut transversely into two pieces at three different distances from the base of embryo attachment. Embryonated and embryoless endosperm pieces of three different sizes thus prepared were compared for the ability to produce α-amylase in the absence and presence of gibberellin A3(GA3). The abitity of the endosperm for α-amylase production was estimated by the activity of α-a...

  10. Galactose inhibits auxin-induced growth of Avena coleoptiles by two mechanisms

    Science.gov (United States)

    Cheung, S. P.; Cleland, R. E.

    1991-01-01

    Galactose inhibits auxin-induced growth of Avena coleoptiles by at least two mechanisms. First, it inhibits auxin-induced H(+)-excretion needed for the initiation of rapid elongation. Galactose cannot be doing so by directly interfering with the ATPase since fusicoccin-induced H(+)-excretion is not affected. Secondly, galactose inhibits long-term auxin-induced growth, even in an acidic (pH 4.5) solution. This may be due to an inhibition of cell wall synthesis. However, galactose does not reduce the capacity of walls to be loosened by H+, given exogenously or excreted in response to fusicoccin.

  11. Antioxidant defenses of mycorrhizal fungus infection against SO(2)-induced oxidative stress in Avena nuda seedlings.

    Science.gov (United States)

    Huang, L L; Yang, C; Zhao, Y; Xu, X; Xu, Q; Li, G Z; Cao, J; Herbert, S J; Hao, L

    2008-11-01

    Colonization of arbuscular mycorrhizal fungi Glomus mosseae increased Avena nuda seedling tolerance to SO(2) exposure, as indicated by elevated total plant biomass and ameliorative photosynthetic rate, when compared to the non-mycorrhizal plants. This is associated with an improved antioxidant capacity as shown by enhanced superoxide dismutase and catalase activity, increased ascorbic acid and glutathione content, and reduced malondialdehyde and hydrogen peroxide level in the mycorrhizal plants relative to the non-mycorrhizal plants under SO(2) exposure. The mycorrhizal fungi colonization had no effect on the stomatal conductance. To our knowledge, this is the first finding of this sort.

  12. Allelopathic of Pinus taeda needles on the germination and development of Avena strigosa seedlings

    OpenAIRE

    Sartor, Laércio Ricardo; Adami, Paulo Fernando; Chini, Nelso; Martin, Thomas Newton; Marchese, José Abramo; Soares, André Brugnara

    2009-01-01

    O trabalho teve por objetivo caracterizar o efeito alelopático do extrato aquoso de acículas de Pinus taeda na germinação e no desenvolvimento inicial de plântulas de aveia preta comum (Avena strigosa). O experimento foi conduzido no Laboratório de Bioquímica e Fisiologia Vegetal da Universidade Tecnológica Federal do Paraná (UTFPR), Campus de Pato Branco, utilizando o delineamento inteiramente casualizado, com tratamento fatorial (bifatorial com parcela subdividida no tempo), com três repeti...

  13. Semillas de Avena fatua L. expelidas por vacunos : su supervivencia enterradas en el suelo

    OpenAIRE

    Cornaglia, Patricia Susana; López, Adela C. de

    1989-01-01

    p.55-62 Avena fatua es una maleza grave del cultivo de trigo de la zona de Bordenave, provincia de Buenos Aires (lat . 37° 51`S, long . 63° 0,1 W). En un sistema trigo-rastrojo pastoreado, común en la región, se observó que los bovinos que comen A. fatua granada expelen semillas enteras. Para probar si estas semillas, que no fueron destruidas por la masticación y la digestión, pueden sobrevivir enterradas varios meses, se alimentó a novillos con heno de A. fatua granada, se recuperaron sem...

  14. Phylogenetic analysis of the genus Avena based on chloroplast intergenic spacer psbA-trnH and single-copy nuclear gene Acc1.

    Science.gov (United States)

    Yan, Hong-Hai; Baum, Bernard R; Zhou, Ping-Ping; Zhao, Jun; Wei, Yu-Ming; Ren, Chang-Zhong; Xiong, Fang-Qiu; Liu, Gang; Zhong, Lin; Zhao, Gang; Peng, Yuan-Ying

    2014-05-01

    Two uncorrelated nucleotide sequences, chloroplast intergenic spacer psbA-trnH and acetyl CoA carboxylase gene (Acc1), were used to perform phylogenetic analyses in 75 accessions of the genus Avena, representing 13 diploids, seven tetraploid, and four hexaploids by maximum parsimony and Bayesian inference. Phylogenic analyses based on the chloroplast intergenic spacer psbA-trnH confirmed that the A genome diploid might be the maternal donor of species of the genus Avena. Two haplotypes of the Acc1 gene region were obtained from the AB genome tetraploids, indicating an allopolyploid origin for the tetraploid species. Among the AB genome species, both gene trees revealed differences between Avena agadiriana and the other species, suggesting that an AS genome diploid might be the A genome donor and the other genome diploid donor might be the Ac genome diploid Avena canariensis or the Ad genome diploid Avena damascena. Three haplotypes of the Acc1 gene have been detected among the ACD genome hexaploid species. The haplotype that seems to represent the D genome clustered with the tetraploid species Avena murphyi and Avena maroccana, which supported the CD genomic designation instead of AC for A. murphyi and A. maroccana.

  15. Induction of resistance by silicon in wheat plants to alate and apterous morphs of Sitobion avenae (Hemiptera: Aphididae).

    Science.gov (United States)

    Dias, P A S; Sampaio, M V; Rodrigues, M P; Korndörfer, A P; Oliveira, R S; Ferreira, S E; Korndörfer, G H

    2014-08-01

    Despite the knowledge about the effects of silicon augmenting antibiosis and nonpreference of plants by apterous aphids, few studies exist on such effects with alate aphids. This study evaluated the effects of silicon fertilization on the biology of alate and apterous morphs of Sitobion avenae (F.) (Hemiptera: Aphididae), and the effect on nonpreference by S. avenae alates for wheat plants with or without silicon fertilization. A method for rearing aphids on detached leaves was evaluated comparing the biology of apterous aphids reared on wheat leaf sections and on whole plants with and without silicon fertilization. Because the use of detached leaves was a reliable method, the effect of silicon fertilization on the biology of apterous and alate S. avenae was assessed using wheat leaf sections. Biological data of aphids were used to calculate a fertility life table. Finally, the effect of silicon fertilization on the nonpreference of alate aphids was carried out for both vegetative and reproductive phases of wheat. Thirty alate aphids were released in the center of a cage, and the number of aphids per whole plant with or without silicon fertilization was observed. Silicon fertilization induced antibiosis resistance in wheat plants to apterous morphs as shown by reduced fecundity, reproductive period, longevity, intrinsic rate of increase, and net reproductive rate; however, alates were unaffected. Plants that received silicon fertilization had fewer alate aphids in both the vegetative and reproductive phases. Thus, silicon fertilization can reduce colonization by alates, enhancing nonpreference resistance, and population growth of apterous S. avenae in wheat plants.

  16. Comparative profiling of microRNAs in the winged and wingless English grain aphid, Sitobion avenae (F.) (Homoptera: Aphididae)

    Science.gov (United States)

    English green aphid, Sitobion avenae (F.), show a classic polyphenic wing dimorphism among isogenic adults that is an intriguing model for the study of morphological plasticity in response to the environment. Short non-coding microRNA (miRNA) molecules regulate gene expression by post-transcriptiona...

  17. Tuber and root resistance of potato genotypes against Meloidogyne chitwoodi in the presence of Avena strigosa, related to tuber quality

    NARCIS (Netherlands)

    Been, Thomas H.; Molendijk, Leendert P.G.; Teklu, Misghina G.; Schomaker, Corrie H.

    2017-01-01

    Relative tuber infestation and quality of two Meloidogyne chitwoodi resistant potato genotypes, AR04-4096 and 2011M1, were compared in glasshouse experiments at initial population density (Pi) = 16 second-stage juveniles (g dry soil)−1 in the presence and absence of the bristle oat, Avena strigosa.

  18. Genetic Diversity in Australian Populations of Puccinia graminis f. sp. avenae.

    Science.gov (United States)

    Keiper, F J; Haque, M S; Hayden, M J; Park, R F

    2006-01-01

    ABSTRACT Sequence-tagged microsatellite profiling was used to develop 110 microsatellites for Puccinia graminis f. sp. tritici (causal agent of wheat stem rust). Low microsatellite polymorphism was exhibited among 10 pathogenically diverse P. graminis f. sp. tritici isolates collected from Australian cereal growing regions over a period of at least 70 years, with two polymorphic loci detected, each revealing two alleles. Limited cross-species amplification was observed for the wheat rust pathogens, P. triticina (leaf rust) and P. striiformis f. sp. tritici (stripe rust). However, very high transferability was revealed with P. graminis f. sp. avenae (causal agent of oat stem rust) isolates. A genetic diversity study of 47 P. graminis f. sp. avenae isolates collected from an Australia-wide survey in 1999, and a historical group of 16 isolates collected from Australian cereal growing regions from 1971 to 1996, revealed six polymorphic microsatellite loci with a total of 15 alleles. Genetic analysis revealed the presence of several clonal lineages and subpopulations in the pathogen population, and wide dispersal of identical races and genotypes throughout Australian cereal-growing regions. These findings demonstrated the dynamic population structure of this pathogen in Australia and concur with the patterns of diversity observed in pathogenicity studies.

  19. Phylogenetic inferences in Avena based on analysis of FL intron2 sequences.

    Science.gov (United States)

    Peng, Yuan-Ying; Wei, Yu-Ming; Baum, Bernard R; Yan, Ze-Hong; Lan, Xiu-Jin; Dai, Shou-Fen; Zheng, You-Liang

    2010-09-01

    The development and application of molecular methods in oats has been relatively slow compared with other crops. Results from the previous analyses have left many questions concerning species evolutionary relationships unanswered, especially regarding the origins of the B and D genomes, which are only known to be present in polyploid oat species. To investigate the species and genome relationships in genus Avena, among 13 diploid (A and C genomes), we used the second intron of the nuclear gene FLORICAULA/LEAFY (FL int2) in seven tetraploid (AB and AC genomes), and five hexaploid (ACD genome) species. The Avena FL int2 is rather long, and high levels of variation in length and sequence composition were found. Evidence for more than one copy of the FL int2 sequence was obtained for both the A and C genome groups, and the degree of divergence of the A genome copies was greater than that observed within the C genome sequences. Phylogenetic analysis of the FL int2 sequences resulted in topologies that contained four major groups; these groups reemphasize the major genomic divergence between the A and C genomes, and the close relationship among the A, B, and D genomes. However, the D genome in hexaploids more likely originated from a C genome diploid rather than the generally believed A genome, and the C genome diploid A. clauda may have played an important role in the origination of both the C and D genome in polyploids.

  20. Response to low-dose herbicide selection in self-pollinated Avena fatua.

    Science.gov (United States)

    Busi, Roberto; Girotto, Marcelo; Powles, Stephen B

    2016-03-01

    When applied at the correct plant stage and dose, herbicides are highly toxic to plants. At reduced, low herbicide doses (below the recommended dose) plants can survive and display continuous and quantitative variation in dose-survival responses. Recurrent (directional) selection studies can reveal whether such a phenotypic variation in plant survival response to low herbicide dose is heritable and leads to herbicide resistance. In a common experimental garden study, we have subjected a susceptible population of self-pollinated hexaploid Avena fatua to low-dose recurrent selection with the ACCase-inhibiting herbicide diclofop-methyl for three consecutive generations. Significant differences in response to low-dose diclofop-methyl selection were observed between the selected progenies and parent plants, with a twofold diclofop-methyl resistance and cross-resistance to ALS-inhibiting herbicides. Thus, the capacity of self-pollinated A. fatua to respond to low-dose herbicide selection is marginal, and it is much lower than in cross-pollinated L. rigidum. Lolium rigidum in the same experiment evolved 40-fold diclofop-methyl resistance by progressive enrichment of quantitative resistance-endowing traits. Cross-pollination rate, genetic variation and ploidy levels are identified as possible drivers affecting the contrasting capacity of Avena versus Lolium plants to respond to herbicide selection and the subsequent likelihood of resistance evolution at low herbicide dose usage. © 2015 Society of Chemical Industry.

  1. Probing behaviors of Sitobion avenae (Hemiptera: Aphididae on enhanced UV-B irradiated plants

    Directory of Open Access Journals (Sweden)

    Hu Zu-Qing

    2013-01-01

    Full Text Available UV-B induced changes in plants can influence sap-feeding insects through mechanisms that have not been studied. Herein the grain aphid, Sitobion avenae (Fabricius (Hemiptera: Aphididae, was monitored on barley plants under the treatments of control [0 kJ/ (m2.d], ambient UV-B [60 kJ/ (m2.d], and enhanced UV-B [120 kJ/ (m2.d] irradiation. Electrical penetration graph (EPG techniques were used to record aphid probing behaviors. Enhanced UV-B irradiated plants negatively affected probing behaviors of S. avenae compared with control plants. In particular, phloem factors that could diminish sieve element acceptance appeared to be involved, as reflected by smaller number of phloem phase, shorter phloem ingestion, and fewer aphids reaching the sustained phloem ingestion phase (E2>10min. On the other hand, factors from leaf surface, epidermis, and mesophyll cannot be excluded, as reflected by higher number of non-probing, longer non-probing and pathway phase, and later the time to first probe.

  2. Comportamiento de la poblacion de Avena fatua tratada con graminicidas postemergentes Effect of post-emergence graminicides on the control of Avena fatua

    Directory of Open Access Journals (Sweden)

    V.F. Juan

    1995-01-01

    Full Text Available En el sudoeste bonaerense de la República Argentina, avena fatua es una maleza que ocupa una significativa proporción del banco de semillas presentes en el suelo, causando severas pérdidas de rendimiento en los cultivos de trigo, lo cuál la caracteriza como una maleza invasora. A pesar de que en los cultivos, se utilizan normalmente prácticas de control com graminicidas selectivos, se observa una alta incidencia de la población de Avena fatua a través de la determinación del número de panojas y semillas por metro cuadrado remanentes de las plantas que escapan al control y que alcanzan el estado reproductivo antes de la cosecha del cereal. El objetivo de este estudio fue evaluar el efecto de varios graminicidas postemergentes selectivos para el cultivo de trigo sobre el crecimiento de la población de Avena fatua por metro cuadrado en un diseño estadístico de bloques al azar con cuatro repeticiones. Los tratamientos fueron los siguientes: testigo sin control, tralkoxydim (150 y 200 g/ha, fenoxaprop-p-etil (69 y 83 g/ha, pirifenop-n-butil (50 y 55 g/ha y diclofop metil (510 y 570 g/ha. En la primer campaña, con una baja infestación de la maleza (153 plantas/m2, todos los herbicidas y dosis probadas ejercieron una drástica reducción de los parámetros evaluados, no detectándose diferenciais significativas entre sí al evaluar el control por medio del número de panojas y semillas producidas por las plantas que escaparon al control. En cambio en la Segunda campaña com 285 plantas/m2 y habiéndoses realizado la aplicación delos avenicidas en un estado fenológico de la maleza más avanzado, el número de semilhas por metro quadradofue reducido a niveles que oscilaron entre un 60% y un 95% respecto del testigo sin control, detectándose diferencias entre los tratamientos. No obstante la reducción lograda, se comprobó en ciertos casos, un importante aporte de semillas que anualmente retornan al suelo, lo que podría significar sino

  3. Uso de inoculante y fertilización nitrogenada en la producción de forraje de avena, ballico y trigo

    Directory of Open Access Journals (Sweden)

    Regina Carrillo Romo

    2010-01-01

    Full Text Available Los objetivos fueron evaluar el efecto combinado de diferentes dosis de inoculante (Rhodococcus fascians y fertilización nitrogenada en la producción de forraje de gramíneas así como la relación costo/beneficio. Las gramíneas fueron, Avena sativa L, Lolium multiflorum Lam yTriticum durum L con los siguientes tratamientos, inoculación, fertilización nitrogenada (0, 30, 60 kg N ha-1, y la combinación de inoculante y fertilización. Las especies se establecieron en condiciones de riego en un suelo migajón franco arcilloso con pH de 6.7 y 0.34 % materia orgánica. El microorganismo se asperjó a la semilla y posteriormente a las plantas después de cada cosecha de forraje. Se evaluó producción de forraje en términos de toneladas de materia seca (MS por hectárea. La evaluación económica se realizó utilizando un análisis marginal donde los indicadores fueron, costos variables, producción de forraje y beneficios netos. El experimento se estableció con un diseño completamente al azar con arreglo factorial 2x3x3 con cuatro repeticiones, donde el primer factor fue la inoculación, el segundo las especies y el tercero las dosis de fertilización nitrogenada. Los resultados muestran que el uso combinado de inoculante más 30 kg N ha-1 produjo 50 % más MS (aproximadamente 11 t más que cuando se aplica sólo nitrógeno, especialmente en avena y ballico anual. El análisis económico mostró que el mejor tratamiento fue el de inoculación con 30 kg N ha-1 en Avena sativa L, con una tasa de retorno marginal por arriba del 60 %.

  4. Gibberellin-like effects of KAR1 on dormancy release of Avena fatua caryopses include participation of non-enzymatic antioxidants and cell cycle activation in embryos

    OpenAIRE

    Cembrowska-Lech, Danuta; K?pczy?ski, Jan

    2015-01-01

    Main conclusion The induction of dormancy release and germination of Avena fatua caryopses by KAR 1 involves ABA degradation to phaseic acid. Both, KAR 1 and GA 3 , control the AsA?GSH cycle, DNA replication and accumulation of ?-tubulin in embryos before caryopses germination. Abstract Avena fatua caryopses cannot germinate in darkness at 20??C because of dormancy, but karrikinolide-1 (KAR1), a compound in plant-derived smoke, and gibberellic acid (GA3) induced an almost complete germination...

  5. Respiration and Protein Synthesis in Dormant and After-ripened Seeds of Avena fatua.

    Science.gov (United States)

    Chen, S S; Varner, J E

    1970-07-01

    Dormant seeds of Avena fatua, which do not germinate when allowed to imbibe water, have a respiration rate only about 20% less than that of imbibed nondormant (after-ripened) seeds in the period before actual germination and are capable of synthesizing protein at a rate comparable to that of the nondormant seeds. An increase of protein synthesis is observed in nondormant seeds at the beginning of root protrusion. Autoradiography of seeds administered (3)H-leucine shows that protein synthesis occurs in the axis part of the embryo, the scutellum, the coleorhiza, and the aleurone layer. Dormancy in seeds is not a state of general inactivity; rather, it must be due to some specific metabolic block.

  6. Respiration and Protein Synthesis in Dormant and After-ripened Seeds of Avena fatua1

    Science.gov (United States)

    Chen, Shepley S. C.; Varner, J. E.

    1970-01-01

    Dormant seeds of Avena fatua, which do not germinate when allowed to imbibe water, have a respiration rate only about 20% less than that of imbibed nondormant (after-ripened) seeds in the period before actual germination and are capable of synthesizing protein at a rate comparable to that of the nondormant seeds. An increase of protein synthesis is observed in nondormant seeds at the beginning of root protrusion. Autoradiography of seeds administered 3H-leucine shows that protein synthesis occurs in the axis part of the embryo, the scutellum, the coleorhiza, and the aleurone layer. Dormancy in seeds is not a state of general inactivity; rather, it must be due to some specific metabolic block. Images PMID:16657399

  7. Television watching, videogames, and excess of body fat in Spanish adolescents: the AVENA study.

    Science.gov (United States)

    Vicente-Rodríguez, Germán; Rey-López, J Pablo; Martín-Matillas, Miguel; Moreno, Luis A; Wärnberg, Julia; Redondo, Carlos; Tercedor, Pablo; Delgado, Manuel; Marcos, Ascensión; Castillo, Manuel; Bueno, Manuel

    2008-01-01

    We assessed the individual association of sedentary behaviors with the risk of overweight and excess body fat (overfat) in adolescents. A representative sample (1960 subjects, 1012 males, age 13-18.5 y) of Spanish adolescents was studied within the framework of the Alimentación y Valoración del Estado Nutricional de los Adolescentes (AVENA) study. Television (TV) watching, videogame and computer usage, doing homework, and the way students got to school, physical activity, and socioeconomic status were analyzed. Anthropometrics were measured to describe overweight (International Obesity Task Force cutoffs for body mass index) and overfat (body fat percentage >85th percentile). When all subjects were considered as an entire group, the overweight risk increased by 15.8% (P videogame usage, respectively (both Ps videogame usage (P videogames during the weekend.

  8. Characteristics and implications of prolonged fusicoccin-induced growth of Avena coleoptile sections

    Science.gov (United States)

    Cleland, R. E.

    1994-01-01

    A study has been made of the prolonged growth of Avena coleoptile sections in response to fusicoccin (FC), a phytotoxin that promotes apoplastic acidification. The final amount of FC-induced growth is a function of the FC concentration. Removal of the epidermis speeds up the initial rate of elongation and shortens the duration of the response, without affecting the total amount of extension. A suboptimal FC concentration (7 x 10(-8) M) which induces the same rate of proton excretion as does optimal indoleacetic acid (IAA) (1 x 10(-5) M), causes elongation which is 60-75% of that induced by IAA in 4 h or 50-65% in 7 h. This suggests that acid-induced extension could make a major contribution to auxin-induced growth for at least 7 h.

  9. Discrimination of oats ( Avena sativa L.) cultivars using isozyme ...

    African Journals Online (AJOL)

    The enzyme extracts prepared from seven days aged seedlings of each cultivars were analyzed through polyacrylamide gel electrophoresis (PAGE) and the cultivars were differentiated based on the presence or absence of bands and intensity of bands in each isozymes. In peroxidase, totally four bands were recorded, and ...

  10. (Avena sativa) with geographical locations in Gansu Province of ...

    African Journals Online (AJOL)

    GREGO

    2007-03-05

    Mar 5, 2007 ... China, especially in the alpine regions such as the. Qinghai-Tibetan Plateau (Ma and Han, 2000). Oat is usually harvested as hay and fed as the supplementary feed for the grazing livestock when the animals suffer from inadequate feeds in the long, harsh cold season under the traditional farming system in ...

  11. Characterization of oats (Avena sativa L.) cultivars using machine vision.

    Science.gov (United States)

    Sumathi, S; Balamurugan, P

    2013-10-15

    Machine vision or image analysis is an important tool in the study of morphology of any materials. This technique has been used successfully to differentiate the eleven oats cultivars based on morphological characters. The geometry of seeds was measured through image analyzer and the variation was observed and recorded. From the recorded data, the cluster analysis was carried out and it revealed that the cultivars could be grouped into two main clusters based on similarity in the measured parameters. Cultivar Sabzar, UPO 212, OL 9 and OL 88 formed one main cluster. The another main cluster includes cv. Kent, OS 6, UPO 94, HFO 114, OS 7, HJ 8 and JHO 822 with many sub clusters. Among the cultivars HJ 8 and JHO 822 has more similarity in all measured parameters than other cultivars. Thus morphological characterization through seed image analysis was found useful to discriminate the cultivars.

  12. Sorption isotherms for oat flakes (Avena sativa L.

    Directory of Open Access Journals (Sweden)

    José Edgar Zapata M.

    2014-04-01

    Full Text Available Moisture sorption isotherms of oat flakes were determined at temperatures of 5, 25 and 37°C, using a gravimetric technique in an a w range of between 0.107 and 0.855. These curves were modeled using six equations commonly applied in food. The quality of the fit was assessed with the regression coefficient (r² and the mean relative percentage error (MRPE. The best fit were obtained with the Caurie model with r² of 0.996, 0.901 and 0.870, and MRPE of 7.190, 17.878 and 16.206, at 5, 25 and 37°C, respectively. The equilibrium moisture presented a dependence on temperature in the studied a w range, as did the security moisture (X S. These results suggest that the recommended storage conditions of oat flakes include: a relative air humidity of 50% between 5 and 25°C and of 38% up to 37°C.

  13. Discrimination of oats (Avena sativa L.) cultivars using isozyme ...

    African Journals Online (AJOL)

    SAM

    2014-07-16

    Jul 16, 2014 ... dark at 37°C. After appearance of brown coloured bands, reaction was ceased by immersing the gel in a solution ... appearance of translucent bands in dark blue background, the gel was photographed. Evaluation and .... interact in co dominant fashion and facilitate the identification of heterozygotes from ...

  14. Two types of genetic carrier, the IncP genomic island and the novel IncP-1β plasmid, for the aac(2')-IIa gene that confers kasugamycin resistance in Acidovorax avenae ssp. avenae.

    Science.gov (United States)

    Yoshii, Atsushi; Omatsu, Tsutomu; Katayama, Yukie; Koyama, Satoshi; Mizutani, Tetsuya; Moriyama, Hiromitsu; Fukuhara, Toshiyuki

    2015-04-01

    A unique aminoglycoside antibiotic, kasugamycin (KSM), has been used to control many plant bacterial and fungal diseases in several countries. The emergence of KSM-resistant Acidovorax avenae ssp. avenae and Burkholderia glumae, which cause rice bacterial brown stripe and rice bacterial grain and seedling rot, respectively, is a serious threat for the effective control of these diseases. Previously, we have identified the aac(2')-IIa gene, encoding a KSM 2'-N-acetyltransferase, from both KSM-resistant pathogens. Although all KSM-resistant isolates from both species possess the aac(2')-IIa gene, only A. avenae strain 83 showed higher resistance than other strains. In this research, kinetic analysis indicates that an amino acid substitution from serine to threonine at position 146 of AAC(2')-IIa in strain 83 is not involved in this increased resistance. Whole draft genome analysis of A. avenae 83 shows that the aac(2')-IIa gene is carried by the novel IncP-1β plasmid pAAA83, whereas the genetic carrier of other strains, the IncP genomic island, is inserted into their chromosomes. The difference in the nucleotides of the promoter region of aac(2')-IIa between strain 83 and other strains indicates an additional transcription start site and results in the increased transcription of aac(2')-IIa in strain 83. Moreover, biological characterization of pAAA83 demonstrates that it can be transferred by conjugation and maintained in the host cells. These results demonstrate that acquisition of the aac(2')-IIa gene takes place in at least two ways and that the gene module, which includes aac(2')-IIa and the downstream gene, may be an important unit for the dissemination of antibiotic resistance. © 2014 BSPP AND JOHN WILEY & SONS LTD.

  15. High-density marker profiling confirms ancestral genomes of Avena species and identifies D-genome chromosomes of hexaploid oat.

    Science.gov (United States)

    Yan, Honghai; Bekele, Wubishet A; Wight, Charlene P; Peng, Yuanying; Langdon, Tim; Latta, Robert G; Fu, Yong-Bi; Diederichsen, Axel; Howarth, Catherine J; Jellen, Eric N; Boyle, Brian; Wei, Yuming; Tinker, Nicholas A

    2016-11-01

    Genome analysis of 27 oat species identifies ancestral groups, delineates the D genome, and identifies ancestral origin of 21 mapped chromosomes in hexaploid oat. We investigated genomic relationships among 27 species of the genus Avena using high-density genetic markers revealed by genotyping-by-sequencing (GBS). Two methods of GBS analysis were used: one based on tag-level haplotypes that were previously mapped in cultivated hexaploid oat (A. sativa), and one intended to sample and enumerate tag-level haplotypes originating from all species under investigation. Qualitatively, both methods gave similar predictions regarding the clustering of species and shared ancestral genomes. Furthermore, results were consistent with previous phylogenies of the genus obtained with conventional approaches, supporting the robustness of whole genome GBS analysis. Evidence is presented to justify the final and definitive classification of the tetraploids A. insularis, A. maroccana (=A. magna), and A. murphyi as containing D-plus-C genomes, and not A-plus-C genomes, as is most often specified in past literature. Through electronic painting of the 21 chromosome representations in the hexaploid oat consensus map, we show how the relative frequency of matches between mapped hexaploid-derived haplotypes and AC (DC)-genome tetraploids vs. A- and C-genome diploids can accurately reveal the genome origin of all hexaploid chromosomes, including the approximate positions of inter-genome translocations. Evidence is provided that supports the continued classification of a diverged B genome in AB tetraploids, and it is confirmed that no extant A-genome diploids, including A. canariensis, are similar enough to the D genome of tetraploid and hexaploid oat to warrant consideration as a D-genome diploid.

  16. PROTEIN QUALITY EVALUATION OF NAKED OAT (AVENA NUDA L.) AND BUCKWHEAT (FAGOPYRUM ESCULENTUM MOENCH) BY BIOLOGICAL METHODS AND PDCAAS METHOD

    OpenAIRE

    Martina Vršková; Emília Bencová; Vladimír Foltys; Michaela Havrlentová; Iveta Čičová

    2013-01-01

    The aim of this paper was to determine the protein quality of naked oat (Avena nuda L.) and buckwheat (Fagopyrum esculentum Moench) by traditional biological methods [Protein Efficiency Ratio (PER), Net Protein Utilization (NPU), Biological value] and the protein digestibility-corrected amino acid score (PDCAAS). As an animal model we used growing rats at the age of 21 days and at average body weight 83 g. The tested feeds represented the only nitrogen source in the experimental diets, and th...

  17. Investigating Intraspecific Variation of Acidovorax avenae subsp. citrulli Using DNA Fingerprinting and Whole Cell Fatty Acid Analysis.

    Science.gov (United States)

    Walcott, R R; Langston, D B; Sanders, F H; Gitaitis, R D

    2000-02-01

    ABSTRACT To assess the diversity of Acidovorax avenae subsp. citrulli, 121 strains from watermelon, cantaloupe, and pumpkin were compared using pulse field gel electrophoresis of SpeI-digested DNA and gas chromatographic analysis of fatty acid methyl esters. Twenty-nine unique DNA fragments resulted from DNA digestion, and 14 distinct haplotypes were observed. Based on cluster analysis, two subgroups, I and II, were recognized, which accounted for 84.8% (eight haplotypes) and 15.2% (six haplotypes) of the strains, respectively. Results of cellular fatty acid analysis varied quantitatively and qualitatively for the A. avenae subsp. citrulli strains and supported the existence of the two subgroups. Group I includes strains from cantaloupe and pumpkin as well as the ATCC type strain, which was first described in the United States in 1978, whereas group II represents the typical watermelon fruit blotch-causing strains that appeared in the mainland United States in 1989. Knowledge of the two A. avenae subsp. citrulli groups may be useful in screening for watermelon fruit blotch resistance.

  18. Variation in the transmission of barley yellow dwarf virus-PAV by different Sitobion avenae clones in China.

    Science.gov (United States)

    Yu, Wenjuan; Xu, Zhaohuan; Francis, Frédéric; Liu, Yong; Cheng, Dengfa; Bragard, Claude; Chen, Julian

    2013-12-01

    Fourteen Sitobion avenae Fabricius (Hemiptera: Aphididae) clonal lines (clones) originating from China were tested for their ability to transmit BYDV-PAV (one isolate from Belgium and another from China) using wheat plants. By sequence analysis, the coat protein gene of BYDV-PAV-BE was distinguishable from BYDV-PAV-CN. All of the clones could transmit BYDV-PAV, and the transmission varied from 24.42% to 66.67% with BYDV-PAV-BE and from 23.55% to 56.18% with BYDV-PAV-CN. These data suggest that S. avenae has no specialty in BYDV-PAV isolate. Significant differences in the transmission frequencies between the clones with BYDV-PAV-BE and BYDV-PAV-CN were observed. The transmission efficiencies of aphid clones from the middle-lower reaches of Yangtze River (AH, HD, HDE, HZ, JZ, JY and SJ) and Yunnan province (YH) were similar. Nevertheless, differences in the virus transmission efficiencies of the clones from northern (ST and STA) and northwestern (QX, SB and XS) regions were assessed. The transmission efficiency of S. avenae from northern and northwestern China, where BYDV impact is more important, was higher than that from the middle-lower reaches of the Yangtze River and Yunnan province. This work emphasizes the importance of considering aphid vector clonal diversity in addition to virus strain variability when assessing BYDV transmission efficiency. Copyright © 2013 Elsevier B.V. All rights reserved.

  19. Acrylic acid removal from synthetic wastewater and industrial wastewater using Ralstonia solanacearum and Acidovorax avenae isolated from a wastewater treatment system manufactured with polyacrylonitrile fiber.

    Science.gov (United States)

    Wang, C C; Lee, C M; Wu, A S

    2009-01-01

    Ralstonia solanacearum and Acidovorax avenae were isolated from a wastewater treatment system manufactured with polyacrylonitrile fiber. The investigation goal is to elucidate the effectiveness of Ralstonia solanacearum and Acidovorax avenae in treating acrylic acid from synthetic wastewater and industrial wastewater. The results reveal that Ralstonia solanacearum and Acidovorax avenae could utilize acrylic acid from synthetic wastewater for growth, when the initial acrylic acid concentration was below 1,009.1 mg/l and 1,383.4 mg/l, respectively. When the acrylic acid concentration was below 606.8 mg/l, the acrylic acid removal ability reached 96.7% and 100%, respectively. Both strains could tolerate acrylamide toxicity, but only Ralstonia solanacearum could tolerate acrylonitrile toxicity. Ralstonia solanacearum and Acidovorax avenae could utilize acrylic acid from industrial wastewater for growth, when the initial acrylic acid concentration was below 1,741.1 mg/l and 1,431.2 mg/l, respectively. When the acrylic acid concentration was below 690.8 mg/l, the acrylic acid removal efficiency reached 83.5% and 62.2%, respectively. Whether the acrylic acid existed in synthetic wastewater or in industrial wastewater, the removal efficiency of acrylic acid by Ralstonia solanacearum exceeded that by Acidovorax avena.

  20. Tripartite interactions of Barley yellow dwarf virus, Sitobion avenae and wheat varieties.

    Directory of Open Access Journals (Sweden)

    Xiao-Feng Liu

    Full Text Available The tripartite interactions in a pathosystem involving wheat (Triticum aestivum L., the Barley yellow dwarf virus (BYDV, and the BYDV vector aphid Sitobion avenae were studied under field conditions to determine the impact of these interactions on aphid populations, virus pathology and grain yield. Wheat varietal resistance to BYDV and aphids varied among the three wheat varieties studied over two consecutive years. The results demonstrated that (1 aphid peak number (APN in the aphid + BYDV (viruliferous aphid treatment was greater and occurred earlier than that in the non-viruliferous aphid treatment. The APN and the area under the curve of population dynamics (AUC on a S. avenae-resistant variety 98-10-30 was significantly lower than on two aphid-susceptible varieties Tam200(13G and Xiaoyan6. (2 The production of alatae (PA was greater on the variety 98-10-30 than on the other varieties, and PA was greater in the aphid + BYDV treatment on 98-10-30 than in the non-viruliferous aphid treatment, but this trend was reversed on Tam200(13G and Xiaoyan6. (3 The BYDV disease incidence (DIC on the variety 98-10-30 was greater than that on the other two varieties in 2012, and the disease index (DID on Tam200(13G was lower than on the other varieties in the aphid + BYDV and BYDV treatments in 2012, but not in 2011 when aphid vector numbers were generally lower. (4 Yield loss in the aphid + BYDV treatment tended to be greater than that in the aphid or BYDV alone treatments across varieties and years. We suggested that aphid population development and BYDV transmission tend to promote each other under field conditions. The aphids + BYDV treatment caused greater yield reductions than non-viruliferous aphids or virus treatment. Wheat varietal resistance in 98-10-30 affects the aphid dispersal, virus transmission and wheat yield loss though inhibits aphid populations from increasing.

  1. Plant growth and phenolic compounds in the rhizosphere soil of wild oat (Avena fatua L.

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    Anna eIannucci

    2013-12-01

    Full Text Available The objectives of this study were to determine the pattern of dry matter (DM accumulation and the evolution of phenolic compounds in the rhizosphere soil from tillering to the ripe seed stages of wild oat (Avena fatua L., a widespread annual grassy weed. Plants were grown under controlled conditions and harvested 13 times during the growing season. At each harvest, shoot and root DM and phenolic compounds in the rhizosphere soil were determined. The maximum DM production (12.6 g/plant was recorded at 122 days after sowing (DAS; kernel hard stage. The increase in total aerial DM with age coincided with reductions in the leaf/stem and source/sink ratios, and an increase in the shoot/root ratio. HPLC analysis shows production of seven phenolic compounds in the rhizosphere soil of wild oat, in order of their decreasing levels: syringic acid, vanillin, 4-hydroxybenzoic acid, syringaldehyde, ferulic acid, p-cumaric acid and vanillic acid. The seasonal distribution for the total phenolic compounds showed two peaks of maximum concentrations, at the stem elongation stage (0.71 μg/kg; 82 DAS and at the heading stage (0.70 μg/kg; 98 DAS. Thus wild oat roots exude allelopathic compounds, and the levels of these phenolics in the rhizosphere soil vary according to plant maturity.

  2. Role of Endogenous Growth Regulators in Seed Dormancy of Avena fatua: I. Short Chain Fatty Acids.

    Science.gov (United States)

    Metzger, J D; Sebesta, D K

    1982-11-01

    The hypothesis that endogenous short chain fatty acids (C 6-C 10) are important in maintaining seeds of wild oat (Avena fatua L.) in the dormant state by acting as natural germination inhibitors (Berrie, Buller, Don, Parker, 1979 Plant Physiol 63: 758-764) was investigated. When germination of nondormant seeds was inhibited by treatment with short chain fatty acids, the seeds did not revert to a similar biochemical and physiological state as exhibited by dormant seeds. First, nonanoic acid-induced inhibition of seed germination was not reversed by hormone treatments which normally break dormancy in wild oat seeds. Second, nondormant seeds treated with short chain fatty acids maintained similar relative proportions of the pentose phosphate pathway and the Embden-Meyerhoff-Parnas pathway for respiratory glucose metabolism as that found in the nondormant controls. Seeds imbibed in the presence of nonanoic acid lost more amino acids and proteins into the imbibition solution than did the untreated controls, suggesting membrane damage had occurred. Inasmuch as increasing concentrations of nonanoic acid also progressively reduced the growth of the coleoptile and roots of intact seedlings until all growth ceased and no germination occurred, the inhibition of seed germination could be due to a nonspecific inhibition of growth of the embryo, perhaps because of disruption of membrane structure and function. Finally, no correlation between endogenous levels of short chain fatty acids in seeds or isolated embryonic axes and seed dormancy could be demonstrated.

  3. Role of Endogenous Growth Regulators in Seed Dormancy of Avena fatua

    Science.gov (United States)

    Metzger, James D.; Sebesta, Deborah K.

    1982-01-01

    The hypothesis that endogenous short chain fatty acids (C 6-C 10) are important in maintaining seeds of wild oat (Avena fatua L.) in the dormant state by acting as natural germination inhibitors (Berrie, Buller, Don, Parker, 1979 Plant Physiol 63: 758-764) was investigated. When germination of nondormant seeds was inhibited by treatment with short chain fatty acids, the seeds did not revert to a similar biochemical and physiological state as exhibited by dormant seeds. First, nonanoic acid-induced inhibition of seed germination was not reversed by hormone treatments which normally break dormancy in wild oat seeds. Second, nondormant seeds treated with short chain fatty acids maintained similar relative proportions of the pentose phosphate pathway and the Embden-Meyerhoff-Parnas pathway for respiratory glucose metabolism as that found in the nondormant controls. Seeds imbibed in the presence of nonanoic acid lost more amino acids and proteins into the imbibition solution than did the untreated controls, suggesting membrane damage had occurred. Inasmuch as increasing concentrations of nonanoic acid also progressively reduced the growth of the coleoptile and roots of intact seedlings until all growth ceased and no germination occurred, the inhibition of seed germination could be due to a nonspecific inhibition of growth of the embryo, perhaps because of disruption of membrane structure and function. Finally, no correlation between endogenous levels of short chain fatty acids in seeds or isolated embryonic axes and seed dormancy could be demonstrated. PMID:16662702

  4. Cloning and characterization of differentially expressed genes in imbibed dormant and afterripened Avena fatua embryos.

    Science.gov (United States)

    Li, B; Foley, M E

    1995-11-01

    To analyze the patterns of gene expression associated with seed dormancy in wild oat (Avena fatua), we have isolated cDNA clones corresponding to genes that are differentially expressed in dormant and afterripened line M73 embryos. Gene transcripts of these clones were maintained in embryos of imbibed dormant caryopses, but declined rapidly in afterripened embryos after imbibition. GA3 treatment of dormant caryopses, which breaks dormancy, could lower the transcript levels in dormant embryos. When the germination of afterripened caryopses was inhibited by high temperature (35 degrees C), the decline in abundance of the transcripts in afterripened embryos was arrested. These genes were expressed to various degrees in water-stressed, but not in unstressed, 7-day-old seedlings. The expression of the genes was also ABA-inducible in afterripened embryos. The expression patterns in non-dormant line SH430 wild oat were similar to those of afterripened M73. DNA sequence analyses indicated that some of the cDNA clones encode LEA (late embryogenesis-abundant) proteins and aldose reductase. The significance of the expression of these genes in maintaining seed dormancy or longevity is discussed.

  5. Television viewing time and risk of eating disorders in Spanish adolescents: AVENA and AFINOS studies.

    Science.gov (United States)

    Martínez-Gómez, David; Veses, Ana M; Gómez-Martínez, Sonia; Pérez de Heredia, Fátima; Castillo, Ruth; Santaliestra-Pasias, Alba M; Calle, Maria Elisa; Garcia-Fuentes, Miguel; Veiga, Oscar Luis; Marcos, Ascensión

    2015-06-01

    Effective preventive interventions for both eating disorders and obesity in adolescence should be focused on shared risk factors. We analyzed the association between television (TV) viewing time and the risk of eating disorders, as well as the potential role of obesity in this association. The sample consisted of a total of 3458 Spanish adolescents, aged 13-18.5 years, from the Food and Assessment of the Nutritional Status of Adolescents (AVENA) and Physical Activity as a Preventive Measure of the Development of Overweight, Obesity, Allergies, Infections, and Cardiovascular Risk Factors in Adolescents (AFINOS) studies. Adolescents' TV time was assessed by self-report. Body mass index was calculated and the adolescents were classified into non-overweight and overweight-obesity. The risk of eating disorders was evaluated using the SCOFF questionnaire. Adolescents who watched TV >1 h/day had a higher risk for eating disorders, compared with those adolescents who watch TV risk for eating disorders than those who were non-overweight. Analyses across groups of TV viewing time and weight status showed similar trends, so that the higher the time spent in TV viewing, the higher the risk of eating disorders, regardless of weight status. TV viewing time might be a focal point for prevention of both eating disorders and obesity in adolescence. © 2015 Japan Pediatric Society.

  6. Simulation model for longterm management of Avena fatua L. in winter wheat

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    Jäck, Ortrud

    2014-02-01

    Full Text Available Decision support systems (DSS are used for weed control decisions worldwide. Several DSS for weed management have been published. However they mostly rely on full herbicide dosages and do not take weed population dynamics into account. We developed a modular DSS for long-term Avena fatua L. control in winter wheat. The DSS was parameterized with three year field experiment datasets covering yield loss data, densitydependent population dynamics data as well as data on dose dependent herbicide efficacy and dosedependent population dynamics. The DSS aims to control the A. fatua in the long run. Our hypothesis is that the optimized DSS reduces herbicide input while keeping the population density at low level, maintaining high grain yields and net return. The DSS comprises four sub-models calculating crop yield loss, A. fatua population dynamics as well as dose dependent herbicide efficacy and economics of the weed control decision. The economic sub-model calculates net return in dependency of the herbicide dosage and thus the resulting crop yield. First results of a 10-year simulation showed that herbicide input could be reduced by 40% compared to the economic threshold strategy, while the population density of A. fatua is controlled. Up to now the DSS has been parameterized for the herbicides Ralon Super, Axial 50 and Broadway. The results show the great potential of reducing herbicide input and point out the importance of including population dynamics models into DSS.

  7. Analysis of Leaf and Root Transcriptome of Soil Grown Avena barbata Plants

    Energy Technology Data Exchange (ETDEWEB)

    Swarbreck, Sté; phanie,; Lindquist, Erika; Ackerly, David; Andersen, Gary

    2011-02-01

    Slender wild oat (Avena barbata) is an annual grass dominant in many grassland ecosystems in Mediterranean climate. This species has been the subject of ecological studies that aim at understanding the effect of global climate change on grassland ecosystems and the genetic basis for adaptation under varying environmental conditions. We present the sequencing and analysis of cDNA libraries constructed from leaf and root samples collected from A. barbata grown on natural soil and under varying rainfall patterns. More than one million expressed sequence tags (ESTs) were generated using both GS 454-FLX pyrosequencing and Sanger sequencing, and these tags were assembled into consensus sequences. We identified numerous candidate polymorphic markers in the dataset, providing possibilities for linking the genomic and the existing genetic information for A. barbata. Using the digital northern method, we showed that genes involved in photosynthesis were down regulated under high rainfall while stress- related genes were up regulated. We also identified a number of genes unique to the root library with unknown function. Real-time RT-PCR was used to confirm the root specificity of some of these transcripts such as two genes encoding O-methyl transferase. Also we showed differential expression under three water levels. Through a combination of Sanger and 454-based sequencing technologies, we were able to generate a large set of transcribed sequences for A. barbata. This dataset provides a platform for further studies of this important wild grass species

  8. Migration by seed dispersal of ACCase-inhibitor-resistant Avena fatua in north-western Mexico.

    Science.gov (United States)

    Tafoya-Razo, J Antonio; Núñez-Farfán, Juan; Torres-García, Jesús R

    2017-01-01

    Biotypes of Avena fatua resistant to ACCase-inhibiting herbicides have been reported in the States of Baja California (BC) and Sonora (SON), Mexico. We hypothesised that resistant biotypes present in SON (Valle de Hermosillo and Valle del Yaqui) are derived from a resistant population from BC (Valle de Mexicali) via gene flow through the transport and exchange of contaminated wheat seed. This study aimed to determine (1) the resistance of A. fatua to ACCase-inhibiting herbicides in populations from BC and SON, (2) the mutation at the site of action and (3) the genetic structure and gene flow among populations. DNA sequencing showed that all biotypes shared the same mutation (Leu × Ile at codon 1781). Microsatellites showed evidence of a genetic bottleneck in SON, and spatial analysis of molecular variance grouped one biotype from the Valle de Mexicali with two biotypes from the Valle de Hermosillo. Migration analysis suggested gene flow from the Valle de Mexicali to the Valle de Hermosillo, but not to the Valle del Yaqui. The presence of resistant biotypes of A. fatua in the Valle de Hermosillo, SON, are likely derived from seeds from BC, possibly through the transport of contaminated wheat seeds. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  9. Gravitropic responses of the Avena coleoptile in space and on clinostats. I. Gravitropic response thresholds

    Science.gov (United States)

    Brown, A. H.; Chapman, D. K.; Johnsson, A.; Heathcote, D.

    1995-01-01

    We conducted a series of gravitropic experiments on Avena coleoptiles in the weightlessness environment of Spacelab. The purpose was to test the threshold stimulus, reciprocity rule and autotropic reactions to a range of g-force stimulations of different intensities and durations The tests avoided the potentially complicating effects of earth's gravity and the interference from clinostat ambiguities. Using slow-speed centrifuges, coleoptiles received transversal accelerations in the hypogravity range between 0.l and 1.0 g over periods that ranged from 2 to 130 min. All responses that occurred in weightlessness were compared to clinostat experiments on earth using the same apparatus. Characteristic gravitropistic response patterns of Atuena were not substantially different from those observed in ground-based experiments. Gravitropic presentation times were extrapolated. The threshold at 1.0 g was less than 1 min (shortest stimulation time 2 min), in agreement with values obtained on the ground. The least stimulus tested, 0.1 g for 130 min, produced a significant response. Therefore the absolute threshold for a gravitropic response is less than 0.1 g.

  10. Genetic analysis of seedling resistance to crown rust in five diploid oat (Avena strigosa) accessions.

    Science.gov (United States)

    Cabral, A L; Park, R F

    2016-02-01

    Crown rust, caused by Puccinia coronata Corda f. sp. avenae Eriks., is a serious menace in oats, for which resistance is an effective means of control. Wild diploid oat accessions are a source of novel resistances that first need to be characterised prior to introgression into locally adapted oat cultivars. A genetic analysis of resistance to crown rust was carried out in three diverse diploid oat accessions (CIav6956, CIav9020, PI292226) and two cultivars (Saia and Glabrota) of A. strigosa. A single major gene conditioning resistance to Australian crown rust pathotype (Pt) 0000-2 was identified in each of the three accessions. Allelism tests suggested that these genes are either the same, allelic, or tightly linked with less than 1 % recombination. Similarly, a single gene was identified in Glabrota, and possibly two genes in Saia; both cultivars previously reported to carry two and three crown rust resistance genes, respectively. The identified seedling resistance genes could be deployed in combination with other resistance gene(s) to enhance durability of resistance to crown rust in hexaploid oat. Current diploid and hexaploid linkage maps and molecular anchor markers (simple sequence repeat [SSR] and diversity array technology [DArT] markers) should facilitate their mapping and introgression into hexaploid oat.

  11. Agronomic performance of black oat (Avena strigosa Schreb., cultivated in constructed wetlands

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    Alisson Carraro Borges

    2010-04-01

    Full Text Available This work aimed to evaluate the agronomic performance of black oat (Avena strigosa Schreb., when cultived in constructed wetlands (CWs in the treatment of domestic wastewater. The experiment was conducted in four CWs for secondary/tertiary treatment of domestic wastewater. The black oats were sown in the CWs at a density of 80 kg ha-1 of seeds. The organic loading rates (OLRs applied in the CWs were 100, 200, 400 and 600 kg ha-1 d-1 of biochemical oxygen demand (BOD. The OLRs were obtained from results of analysis of BOD influent the CWs. The variables evaluated in influent and effluent of CWs were biochemical oxygen demand, chemical oxygen demand, total nitrogen, total phosphorus, potassium, sodium and electrical conductivity. In plant tissue the productivity of dry matter and the content of crude protein were evaluated. The productivity of dry matter for black oats were independent of OLRs applied. The highest yield of dry matter was obtained by applying 400 kg.ha-1 d-1 BOD. There was an average productivity of crude protein of 15.38 dag kg-1 in the black oat. The domestic wastewater can be a suitable nutritional solution for production of black oats in the CWs.

  12. Temperature and salinity affect the germination and growth of Silybum marianum Gaertn and Avena fatua

    International Nuclear Information System (INIS)

    Kashmir, S.; Khan, M. A.; Shad, A.

    2016-01-01

    Two troublesome weeds like Silybum marianum and Avena fatua were exposed to different levels of temperature and salinity. Laboratory based experimented were conducted in the Department of Weed Science, The University of Agriculture Peshawar during 2015. Sterilized seeds of S. marianum and A. fatua were placed in petri-dishes in a growth chamber. The temperature levels studied were 15, 25 and 40 degree C while the NaCl concentrations were 0, 100, 200, 300, 400, 500 and 600 mM. Data revealed that germination and growth related traits responded differently to different levels of temperature and salinity. Optimum temperature (25 degree C) resulted in higher germination and growth of both the weed species. While highest temperature used (40 degree C) or lower temperature (15 degree C) resulted in poor germination and growth of S. marianum and A. fatua. Salinity level up to 100 mM did not affect the seed germination of S. marianum and A. fatua. NaCl concentration above 100 mM significantly decreased germination and ceased the germination of both the weeds at 600 mM. Like germination, the growth related variables were also decreased at very low or very high temperature and higher concentrations of NaCl. It is concluded that temperature and NaCl can affect establishment, growth and seed production potential of S. marianum and A. fatua. (author)

  13. Alelopatia de acículas de Pinus taeda na germinação e no desenvolvimento de plântulas de Avena strigosa Allelopathic of Pinus taeda needles on the germination and development of Avena strigosa seedlings

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    Laércio Ricardo Sartor

    2009-09-01

    Full Text Available O trabalho teve por objetivo caracterizar o efeito alelopático do extrato aquoso de acículas de Pinus taeda na germinação e no desenvolvimento inicial de plântulas de aveia preta comum (Avena strigosa. O experimento foi conduzido no Laboratório de Bioquímica e Fisiologia Vegetal da Universidade Tecnológica Federal do Paraná (UTFPR, Campus de Pato Branco, utilizando o delineamento inteiramente casualizado, com tratamento fatorial (bifatorial com parcela subdividida no tempo, com três repetições, sob condições de temperatura, umidade e luminosidade controladas. Os tratamentos foram compostos por cinco concentrações (0, 25, 50, 75 e 100% de extrato bruto de acículas de pínus em estágio vegetativo (acícula verde, moderadamente decomposto (acícula seca e em decomposição avançada (acícula decomposta. As avaliações foram realizadas a cada 24 horas. Foram avaliados os parâmetros porcentagem de germinação, velocidade média de germinação e comprimento de radículas e epicótilos das plântulas de Avena strigosa. O estágio de acícula verde afetou significativamente as variáveis avaliadas e esse problema aumentou com a concentração do extrato.The purpose of this study was to verify the allelopathic effect of aqueous extract from the Pinus taeda needles on the germination and development of black oat (Avena strigosa seedlings. The work was carried out at the Plant Physiology and Biochemistry Laboratory at the Federal Technological University of Paraná (UTFPR, Campus Pato Branco, using a completely randomized design with factorial distribution in three replicates, under temperature, humidity and light controlled conditions. The extract from the pine needles was composed of five percentages (0, 25, 50, 75 and 100% from the crude extract (EB dilution, composed of distilled water + pine needles in vegetative stage (green needles, moderately decomposed (dry needles and in advanced decomposition (decomposed needles. The

  14. De Novo Assembly and Phasing of Dikaryotic Genomes from Two Isolates of Puccinia coronata f. sp. avenae, the Causal Agent of Oat Crown Rust.

    Science.gov (United States)

    Miller, Marisa E; Zhang, Ying; Omidvar, Vahid; Sperschneider, Jana; Schwessinger, Benjamin; Raley, Castle; Palmer, Jonathan M; Garnica, Diana; Upadhyaya, Narayana; Rathjen, John; Taylor, Jennifer M; Park, Robert F; Dodds, Peter N; Hirsch, Cory D; Kianian, Shahryar F; Figueroa, Melania

    2018-02-20

    Oat crown rust, caused by the fungus Pucinnia coronata f. sp. avenae , is a devastating disease that impacts worldwide oat production. For much of its life cycle, P. coronata f. sp. avenae is dikaryotic, with two separate haploid nuclei that may vary in virulence genotype, highlighting the importance of understanding haplotype diversity in this species. We generated highly contiguous de novo genome assemblies of two P. coronata f. sp. avenae isolates, 12SD80 and 12NC29, from long-read sequences. In total, we assembled 603 primary contigs for 12SD80, for a total assembly length of 99.16 Mbp, and 777 primary contigs for 12NC29, for a total length of 105.25 Mbp; approximately 52% of each genome was assembled into alternate haplotypes. This revealed structural variation between haplotypes in each isolate equivalent to more than 2% of the genome size, in addition to about 260,000 and 380,000 heterozygous single-nucleotide polymorphisms in 12SD80 and 12NC29, respectively. Transcript-based annotation identified 26,796 and 28,801 coding sequences for isolates 12SD80 and 12NC29, respectively, including about 7,000 allele pairs in haplotype-phased regions. Furthermore, expression profiling revealed clusters of coexpressed secreted effector candidates, and the majority of orthologous effectors between isolates showed conservation of expression patterns. However, a small subset of orthologs showed divergence in expression, which may contribute to differences in virulence between 12SD80 and 12NC29. This study provides the first haplotype-phased reference genome for a dikaryotic rust fungus as a foundation for future studies into virulence mechanisms in P. coronata f. sp. avenae IMPORTANCE Disease management strategies for oat crown rust are challenged by the rapid evolution of Puccinia coronata f. sp. avenae , which renders resistance genes in oat varieties ineffective. Despite the economic importance of understanding P. coronata f. sp. avenae , resources to study the

  15. Respuesta productiva de conejos alimentados con forraje verde hidropónico de avena, como reemplazo parcial de concentrado comercial

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    Francisco Fabián Fuentes Carmona

    2011-04-01

    Full Text Available La respuesta productiva de conejos raza californiana alimentados con forraje verde hidropónico (FVH de avena como reemplazo parcial de concentrado comercial (CC, fue evaluada en condiciones de desierto en el norte de Chile. Se establecieron cinco tratamientos de alimentación, equivalentes a 0, 25, 50, 75 y 100% de reemplazo de la dieta diaria con FVH, el cual fue cosechado y utilizado directamente diez días después de la siembra. Cuarenta y cinco conejos destetados a los 31 días fueron evaluados en un diseño completamente al azar hasta alcanzar un peso de sacrificio de 2 kg de peso vivo. La calidad del FVH de avena fue considerada como buena, presentando similar valor nutritivo que el CC. Las variables evaluadas y sus respectivos rangos fueron: consumo de materia seca promedio (59.17 - 104.73 g/día, ganancia de peso vivo promedio (16.35 - 29.10 g/animal por día, conversión alimenticia promedio (3.31 - 3.93 kg MS/kg PV, tiempo de peso vivo a sacrificio (53 - 91 días, peso vivo final (1430 - 2044 g/animal, peso de la canal (1235 - 1385 g/animal y rendimiento de la canal (59.19 - 62.25%. El reemplazo de hasta 50% de la dieta base con FVH de avena no afectó significativamente (P < 0.05 el consumo de alimento, tiempo de peso vivo a sacrificio, peso vivo final y rendimiento de la canal, haciendo posible su uso como recurso forrajero alternativo en la alimentación de conejos en etapa de engorde en condiciones de desierto.

  16. Non-target Site Tolerance Mechanisms Describe Tolerance to Glyphosate in Avena sterilis.

    Science.gov (United States)

    Fernández-Moreno, Pablo T; Alcantara-de la Cruz, Ricardo; Cruz-Hipólito, Hugo E; Rojano-Delgado, Antonia M; Travlos, Ilias; De Prado, Rafael

    2016-01-01

    Sterile wild oat (Avena sterilis L.) is an autogamous grass established in warm climate regions. This species has been used as a cover crop in Mediterranean perennial crops during the spring period prior to initiating competition with the main crop for water and nutrients. However, such cover crops need to be controlled (by glyphosate or tillage) before the beginning of summer period (due to the possibility of intense drought stress). In 2011, the olive grove farmers of southern Spain expressed dissatisfaction because of the ineffective control with glyphosate on A. sterilis. Experiments were conducted to determine whether the continued use of glyphosate over a 5 year period had selected a new resistant or tolerant species. The GR50 values obtained for A. sterilis were 297.12 and 245.23 g ae ha(-1) for exposed (E) and un-exposed (UE) glyphosate accessions, respectively. The spray retention and shikimic acid accumulation exhibited a non-significant difference between the two accessions. The results of (14)C- glyphosate absorption was the same in the two accessions (E and UE), while the translocation from the treated leaf to the rest of the shoots and roots was similar in A. sterilis accessions. Glyphosate metabolism to aminomethylphosphonic acid (AMPA) and glyoxylate was similar in both accessions, but increased after treatment with glyphosate, indicating that metabolism plays an important role in tolerance. Both A. sterilis accessions, present similarity in the 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) activity enzyme with different glyphosate concentrations and without glyphosate, confirming that both accessions present the same genomic characteristics. The above-mentioned results indicate that innate tolerance to glyphosate in A. sterilis is probably and partly due to reduced herbicide absorption and translocation and metabolism compared to the susceptibility of other grasses weeds like Chloris inflata, Eleusine indica, and Lolium rigidum.

  17. Role of Endogenous Plant Growth Regulators in Seed Dormancy of Avena fatua

    Science.gov (United States)

    Metzger, James D.

    1983-01-01

    Gibberellin A1 (GA1) was identified by combined gas chromatographymass spectrometry as the major biologically active gibberellin (GA) in seeds of wild oat (Avena fatua L.) regardless of the depth of dormany or stage of imbibition. Both unimbibed dormant and nondromant seeds contained similar amounts of GA1 as estimated by the d5-maize bioassay. During imbibition, the level of GA1 declined in both dormant and non-dormant seeds, although the decline was more rapid in dormant seeds. Only in imbibing nondormant seeds did the GA biosynthesis inhibitor, 2-chloroethyltrimethyl ammonium chloride (CCC), cause a reduction in the level of GA1 from that observed in control seeds. These results are interpreted as an indication that while afterripening does not cause a direct change in the levels of GAs during dry storage, it does induce a greater capacity for GA biosynthesis during imbibition. Nondormant seeds imbibed in the presence of 50 millimolar CCC germinated equally as well as untreated seeds. When wild oat plants were fed CCC throughout the entire life cycle, viable seeds were produced that lacked detectable GA-like substances. These seeds afterripened at a slightly slower rate than the controls. Moreover, completely afterripened (nondormant) seeds from plants fed CCC continuously contained no detectable GA-like substances, and when these seeds germinated, dwarf seedlings were produced, indicating GA biosynthesis was inhibited during and after germination. In total, these results suggest that the increased capacity for GA biosynthesis observed in imbibing nondormant seeds is not a necessary prerequisite for germination. It is therefore possible that GA biosynthesis in imbibing nondormant seeds is one of many coordinated biochemical events that occur during germination rather than an initiator of the processes leading to germination. PMID:16663302

  18. A genetic model and molecular markers for wild oat (Avena fatua L.) seed dormancy.

    Science.gov (United States)

    Fennimore, S A; Nyquist, W E; Shaner, G E; Doerge, R W; Foley, M E

    1999-08-01

    Seed dormancy allows weed seeds to persist in agricultural soils. Wild oat (Avena fatua L.) is a major weed of cereal grains and expresses a range of seed dormancy phenotypes. Genetic analysis of wild oat dormancy has been complicated by the difficulty of phenotypic classification in segregating populations. Therefore, little is known about the nature of the genes that regulate dormancy in wild oat. The objectives of our studies were to develop methods to classify the germination responses of segregating wild oat populations and to find molecular markers linked to quantitative trait loci (QTL) that regulate seed dormancy in wild oat. RAPD markers OPX-06 and OPT-04 explained 12.6% and 6.8% respectively, of the F(2) phenotypic variance. OPF-17 was not significant in a simple regression model, but it was linked in repulsion to OPT-04. A three-locus model of seed dormancy in wild oat is presented based on the 41-day germination profiles of F(1), F(2), F(3), BC(1)P(1)F(1), BC(1)P(1)F(2), and BC(1)P(2)F(1) generations, and the 113 day germination profile of 126 F(7) recombinant inbred lines. Loci G (1) and G (2) promote early germination, and the D locus promotes late germination. If at least one copy of the dominant G (1) or G (2 )alleles are present regardless of the genotype at D locus, then the individual will be nondormant. If the genotype is g (1) g (1) g (2) g (2) D_, then the phenotype will be dormant.

  19. Role of Endogenous Plant Growth Regulators in Seed Dormancy of Avena fatua: II. Gibberellins.

    Science.gov (United States)

    Metzger, J D

    1983-11-01

    Gibberellin A(1) (GA(1)) was identified by combined gas chromatographymass spectrometry as the major biologically active gibberellin (GA) in seeds of wild oat (Avena fatua L.) regardless of the depth of dormany or stage of imbibition. Both unimbibed dormant and nondromant seeds contained similar amounts of GA(1) as estimated by the d5-maize bioassay. During imbibition, the level of GA(1) declined in both dormant and non-dormant seeds, although the decline was more rapid in dormant seeds. Only in imbibing nondormant seeds did the GA biosynthesis inhibitor, 2-chloroethyltrimethyl ammonium chloride (CCC), cause a reduction in the level of GA(1) from that observed in control seeds. These results are interpreted as an indication that while afterripening does not cause a direct change in the levels of GAs during dry storage, it does induce a greater capacity for GA biosynthesis during imbibition.Nondormant seeds imbibed in the presence of 50 millimolar CCC germinated equally as well as untreated seeds. When wild oat plants were fed CCC throughout the entire life cycle, viable seeds were produced that lacked detectable GA-like substances. These seeds afterripened at a slightly slower rate than the controls. Moreover, completely afterripened (nondormant) seeds from plants fed CCC continuously contained no detectable GA-like substances, and when these seeds germinated, dwarf seedlings were produced, indicating GA biosynthesis was inhibited during and after germination. In total, these results suggest that the increased capacity for GA biosynthesis observed in imbibing nondormant seeds is not a necessary prerequisite for germination. It is therefore possible that GA biosynthesis in imbibing nondormant seeds is one of many coordinated biochemical events that occur during germination rather than an initiator of the processes leading to germination.

  20. Atividade antimicrobiana de extratos vegetais sobre o desenvolvimento de Acidovorax avenae subsp citrulli.

    Directory of Open Access Journals (Sweden)

    César Luis Siqueira Junior

    2014-08-01

    Full Text Available A atividade antimicrobiana de plantas medicinais tem sido pesquisada em diversas espécies no Brasil. A utilização de extratos vegetais como uma ferramenta para o controle de doenças de plantas se tornou uma prática útil na agricultura. No presente estudo, 7 extratos etanólicos de plantas foram testados quanto suas atividades antibacterianas. A ação antibacteriana foi avaliada através da inoculação de placas contendo meio Sacarose Peptona Agar (SPA, com a bactéria Acidovorax avenae, com  nove discos de papel contendo, um deles, o antimicrobianos comercial (ampicilina e os outros embebidos com 100 mL dos extratos etanólicos. As placas foram incubadas a 37 ºC por 48 horas, e a leitura de diâmetro halos de inibição foi feita. Os resultados demonstraram que os extratos testados foram ativos contra a bactéria com exceção dos extratos de mamona, e de abricó para os quais não foi detectada a inibição de crescimento bacteriano. Os extratos de tanchagem, pitomba e baquipari provocaram a inibição no crescimento bacteriano formando halos médios de 26, 26 e 23,3 mm, respectivamente. De maneira surpreendente, a mistura dos extratos de abricó e baquipari (1:1 causou um aumento na inibição do crescimento bacteriano, sugerindo o potencial de uso de extratos combinados contra patógenos de plantas.

  1. The adaptive significance of drought escape in Avena barbata, an annual grass.

    Science.gov (United States)

    Sherrard, Mark E; Maherali, Hafiz

    2006-12-01

    Drought strongly influences plant productivity, suggesting that water limitation has shaped the evolution of many plant physiological traits. One functional strategy that plants employ to cope with decreasing water availability is drought escape. For drought-escaping species, high metabolic activity (gas exchange) and rapid growth are hypothesized to confer a fitness advantage, because this enables a plant to complete its life cycle before the most intense period of drought. By growing an annual grass species (Avena barbata) under well-watered or water-limited conditions in a greenhouse, we directly tested whether high photosynthesis, increased stomatal opening, and early flowering are adaptive under drought. We measured phenotypic selection on instantaneous gas exchange and flowering time as well as the underlying biochemical traits that regulate photosynthesis. We found strong selection for earlier flowering in the dry environment, but no evidence that increased photosynthesis was adaptive under drought. Photosynthetic rate (A) and stomatal conductance (gs) were both adaptively neutral in the dry environment. Increased photosynthetic capacity (Amax) was maladaptive in the dry environment, perhaps because of the respiratory cost associated with maintaining excess enzyme and substrate capacity. There was no correlational selection on the combination of physiology and flowering time in the dry environment, suggesting that accelerated development and high gas exchange may not need to be tightly linked to promote drought escape. In contrast, there was selection for both high photosynthetic function (Amax and A) and early flowering in the well-watered environment. These combinations of traits may have been favored because they maximize both energy and time available for reproduction. Our results suggest that the benefit of increased photosynthesis for plant fitness may be strongest in the absence of drought stress.

  2. ACCase mutations in Avena sterilis populations and their impact on plant fitness.

    Science.gov (United States)

    Papapanagiotou, Aristeidis P; Paresidou, Maria I; Kaloumenos, Nikolaos S; Eleftherohorinos, Ilias G

    2015-09-01

    Avena sterilis (sterile oat) populations originating from wheat-growing regions of Greece, developed resistance to fenoxaprop, clodinafop and other herbicides. The partial ACCase gene sequence revealed six point mutations (Ile-1781-Leu, Trp-1999-Cys, Trp-2027-Cys, Ile-2041-Asn, Asp-2078-Gly, and Cys-2088-Arg) in 24 out of the 26 resistant (R) populations, confirming the molecular mechanism of resistance to ACCase-inhibiting herbicides. However, DNA sequence of two R populations did not reveal any known ACCase mutations, suggesting possible presence of unknown mutation or metabolism-based mechanism of resistance. The Cys-2088-Arg mutation is the first record for ACCase mutant conferring target-site resistance in A. sterilis worldwide. The evaluation of 12 R and 6 susceptible (S) populations under non-competitive field conditions did not indicate consistent mean growth rate differences, whereas the pot evaluation of the same (12 R and 6 S) populations grown in competition with wheat or in pure stands showed significant growth (fresh weight and panicle number) differences between six S populations and between six R populations containing the same ACCase mutation (Ile-2041-Asn). Finally, one S and five R (Trp-1999-Cys, Trp-2027-Cys, Ile-2041-Asn, Asp-2078-Gly, and Cys-2088-Arg) populations grown under field competitive conditions indicated fresh weight and panicle number differences in competition with other populations as compared with pure stands. These findings suggest clearly that the inconsistent fitness differences between R and S A. sterilis populations are not related with the ACCase resistance trait but they may result from other non-resistance fitness traits selected in their different geographical locations. Copyright © 2015 Elsevier Inc. All rights reserved.

  3. Eugenol-inhibited root growth in Avena fatua involves ROS-mediated oxidative damage.

    Science.gov (United States)

    Ahuja, Nitina; Singh, Harminder Pal; Batish, Daizy Rani; Kohli, Ravinder Kumar

    2015-02-01

    Plant essential oils and their constituent monoterpenes are widely known plant growth retardants but their mechanism of action is not well understood. We explored the mechanism of phytotoxicity of eugenol, a monoterpenoid alcohol, proposed as a natural herbicide. Eugenol (100-1000 µM) retarded the germination of Avena fatua and strongly inhibited its root growth compared to the coleoptile growth. We further investigated the underlying physiological and biochemical alterations leading to the root growth inhibition. Eugenol induced the generation of reactive oxygen species (ROS) leading to oxidative stress and membrane damage in the root tissue. ROS generation measured in terms of hydrogen peroxide, superoxide anion and hydroxyl radical content increased significantly in the range of 24 to 144, 21 to 91, 46 to 173% over the control at 100 to 1000 µM eugenol, respectively. The disruption in membrane integrity was indicated by 25 to 125% increase in malondialdehyde (lipid peroxidation byproduct), and decreased conjugated diene content (~10 to 41%). The electrolyte leakage suggesting membrane damage increased both under light as well as dark conditions measured over a period from 0 to 30 h. In defense to the oxidative damage due to eugenol, a significant upregulation in the ROS-scavenging antioxidant enzyme machinery was observed. The activities of superoxide dismutases, catalases, ascorbate peroxidases, guaiacol peroxidases and glutathione reductases were elevated by ~1.5 to 2.8, 2 to 4.3, 1.9 to 5.0, 1.4 to 3.9, 2.5 to 5.5 times, respectively, in response to 100 to 1000 µM eugenol. The study concludes that eugenol inhibits early root growth through ROS-mediated oxidative damage, despite an activation of the antioxidant enzyme machinery. Copyright © 2014 Elsevier Inc. All rights reserved.

  4. The role of root development of Avena fatua in conferring soil strength.

    Science.gov (United States)

    Dumlao, Matthew R; Ramananarivo, Sophie; Goyal, Vivek; DeJong, Jason T; Waller, Jack; Silk, Wendy K

    2015-07-01

    • Roots play an important role in strengthening and stabilizing soils. Existing models predict that tensile strength and root abundance are primary factors that strengthen soil. This study quantified how both factors are affected by root developmental stage.• Focusing on early development of Avena fatua, a common grassland species with a fibrous root system, we chose three developmental stages associated with major changes in the root system. Seeds were planted in rhizotrons for easy viewing and pots to allow root growth surrounded by soil. Tensile strength was determined by subjecting root segments to a progressively larger pulling force until breaking occurred. Root abundance at two depths was characterized by the cross-sectional area of the roots divided by the area of the soil core (i.e., root area ratio). Shear strength of 50 mm saturated soil columns was determined with a modified interface direct shear device.• Tensile strength increased by a factor of ≥15× with distance from the root tip. Thus, soil-strengthening properties increased with root cell development. Plants grown under dry soil conditions produced roots with higher maximal tensile strength (41.9 MPa vs. approximately 17 MPa), largely explained by 33% thinner diameters. Over 7 weeks of root growth, root abundance increased by a factor of 4.8× while saturated soil shear strength increased by 24% in the upper soil layer.• Root development should be incorporated into models of soil stability to improve understanding of this important environmental property. © 2015 Botanical Society of America, Inc.

  5. A mutation (L1014F) in the voltage-gated sodium channel of the grain aphid, Sitobion avenae, is associated with resistance to pyrethroid insecticides.

    Science.gov (United States)

    Foster, Stephen P; Paul, Verity L; Slater, Russell; Warren, Anne; Denholm, Ian; Field, Linda M; Williamson, Martin S

    2014-08-01

    The grain aphid, Sitobion avenae Fabricius (Hemiptera: Aphididae), is an important pest of cereal crops. Pesticides are the main method for control but carry the risk of selecting for resistance. In response to reports of reduced efficacy of pyrethroid sprays applied to S. avenae, field samples were collected and screened for mutations in the voltage-gated sodium channel, the primary target site for pyrethroids. Aphid mobility and mortality to lambda-cyhalothrin were measured in coated glass vial bioassays. A single amino acid substitution (L1014F) was identified in the domain IIS6 segment of the sodium channel from the S. avenae samples exhibiting reduced pyrethroid efficacy. Bioassays on aphids heterozygous for the kdr mutation (SR) or homozygous for the wild-type allele (SS) showed that those carrying the mutation had significantly lower susceptibility to lambda-cyhalothrin. The L1014F (kdr) mutation, known to confer pyrethroid resistance in many insect pests, has been identified for the first time in S. avenae. Clonal lines heterozygous for the mutation showed 35-40-fold resistance to lambda-cyhalothrin in laboratory bioassays, consistent with the reported effect of this mutation on pyrethroid sensitivity in other aphid species. © 2013 Society of Chemical Industry.

  6. De novo assembly and phasing of dikaryotic genomes from two isolates of Puccinia coronata f. sp. avenae, the causal agent of oat crown rust

    Science.gov (United States)

    Oat crown rust, caused by the fungus Puccinia coronata f. sp. avenae (Pca), is a devastating disease that impacts worldwide oat production. For much of its life cycle Pca is dikaryotic with two separate haploid nuclei that may vary in virulence genotypes, which highlights the importance of understan...

  7. Silencing the expression of the salivary sheath protein causes transgenerational feeding suppression in the aphid Sitobion avenae.

    Science.gov (United States)

    Abdellatef, Eltayb; Will, Torsten; Koch, Aline; Imani, Jafargholi; Vilcinskas, Andreas; Kogel, Karl-Heinz

    2015-08-01

    Aphids produce gel saliva during feeding which forms a sheath around the stylet as it penetrates through the apoplast. The sheath is required for the sustained ingestion of phloem sap from sieve elements and is thought to form when the structural sheath protein (SHP) is cross-linked by intermolecular disulphide bridges. We investigated the possibility of controlling aphid infestation by host-induced gene silencing (HIGS) targeting shp expression in the grain aphid Sitobion avenae. When aphids were fed on transgenic barley expressing shp double-stranded RNA (shp-dsRNA), they produced significantly lower levels of shp mRNA compared to aphids feeding on wild-type plants, suggesting that the transfer of inhibitory RNA from the plant to the insect was successful. shp expression remained low when aphids were transferred from transgenic plants and fed for 1 or 2 weeks, respectively, on wild-type plants, confirming that silencing had a prolonged impact. Reduced shp expression correlated with a decline in growth, reproduction and survival rates. Remarkably, morphological and physiological aberrations such as winged adults and delayed maturation were maintained over seven aphid generations feeding on wild-type plants. Targeting shp expression therefore appears to cause strong transgenerational effects on feeding, development and survival in S. avenae, suggesting that the HIGS technology has a realistic potential for the control of aphid pests in agriculture. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

  8. Bacterial symbionts, Buchnera, and starvation on wing dimorphism in English grain aphid, Sitobion avenae (F. (Homoptera: Aphididae

    Directory of Open Access Journals (Sweden)

    Fangmei eZhang

    2015-05-01

    Full Text Available Wing dimorphism in aphids can be affected by multiple cues, including both biotic (nutrition, crowding, interspecific interactions, the presence of natural enemies, maternal and transgenerational effects, and alarm pheromone and abiotic factors (temperature, humidity, and photoperiod. The majority of the phloem-feeding aphids carry Buchnera, an obligate symbiotic proteobacteria. Buchnera has a highly reduced genome size, but encode key enzymes in the tryptophan biosynthetic pathway and is crucial for nutritional balance, development and reproduction in aphids. In this study, we investigated the impact of two nutritional-based biotic factors, symbionts and starvation, on the wing dimorphism in the English grain aphid, Sitobion avenae, a devastating insect pest of cereal crops (e.g., wheat worldwide. Elimination of Buchnera using the antibiotic rifampicin significantly reduced the formation of winged morphs, body mass and fecundity in S. avenae. Furthermore, the absence of this primary endosymbiont may disrupt the nutrient acquisition in aphids and alter transgenerational phenotypic expression. Similarly, both survival rate and the formation of winged morphs were substantially reduced after neonatal (< 24h old offspring were starved for a period of time. The combined results shed light on the impact of two nutritional-based biotic factors on the phenotypic plasticity in aphids. A better understanding of the wing dimorphism in aphids will provide the theoretical basis for the prediction and integrated management of these phloem-feeding insect pests.

  9. Two-dimensional electrophoresis of proteins discriminates aphid clones of Sitobion avenae differing in BYDV-PAV transmission.

    Science.gov (United States)

    Papura, D; Jacquot, E; Dedryver, C A; Luche, S; Riault, G; Bossis, M; Rabilloud, T

    2002-10-01

    Aset of 39 F1 Sitobion avenae clones was obtained by selfing a poorly efficient BYDV-PAV vector clone. These clones were genetically typed by 11 microsatellite loci, and tested for BYDV-PAV4 transmission to barley. The 39 clones displayed a continuum in transmission percentages, from 0% to 88% with a significant clone effect. From this set, two highly efficient (HEV) and two poorly efficient (PEV) vectoring clones were more precisely characterized for transmission of two other PAV isolates. The molecular bases of the lower transmissibility of BYDV-PAV4 by PEV clones and of the aphid vectoring properties were investigated respectively by comparing the sequences corresponding to structural proteins (CP and RTD) of BYDV, and by using proteomic analysis of aphids in two dimensional electrophoresis (2-DE) with immobilized pH gradients (IPG) after an improved protein extraction. Four residues specific to BYDV-PAV4 located in the CP sequence (A(24) and L(130)) or in the RTD region (M(334) and S(456)) could be responsible for the lower transmissibility of this isolate by PEV clones. Among a total of 2150 well-resoluted spots scored on S. avenae proteinic pattern, only twelve proteins were qualitatively or quantitatively different between clones. Four out of them discriminated HEV and PEV groups.

  10. Rapid and Specific Detection of Acidovorax avenae subsp. citrulli Using SYBR Green-Based Real-Time PCR Amplification of the YD-Repeat Protein Gene.

    Science.gov (United States)

    Cho, Min Seok; Park, Duck Hwan; Ahn, Tae-Young; Park, Dong Suk

    2015-09-01

    The aim of this study was to develop a SYBR Green-based real-time PCR assay for the rapid, specific, and sensitive detection of Acidovorax avenae subsp. citrulli, which causes bacterial fruit blotch (BFB), a serious disease of cucurbit plants. The molecular and serological methods currently available for the detection of this pathogen are insufficiently sensitive and specific. Thus, a novel SYBR Green-based real-time PCR assay targeting the YD-repeat protein gene of A. avenae subsp. citrulli was developed. The specificity of the primer set was evaluated using DNA purified from 6 isolates of A. avenae subsp. citrulli, 7 other Acidovorax species, and 22 of non-targeted strains, including pathogens and non-pathogens. The AC158F/R primer set amplified a single band of the expected size from genomic DNA obtained from the A. avenae subsp. citrulli strains but not from the genomic DNA of other Acidovorax species, including that of other bacterial genera. Using this assay, it was possible to detect at least one genomeequivalents of the cloned amplified target DNA using 5 × 10(0) fg/μl of purified genomic DNA per reaction or using a calibrated cell suspension, with 6.5 colony-forming units per reaction being employed. In addition, this assay is a highly sensitive and reliable method for identifying and quantifying the target pathogen in infected samples that does not require DNA extraction. Therefore, we suggest that this approach is suitable for the rapid and efficient diagnosis of A. avenae subsp. citrulli contaminations of seed lots and plants.

  11. Isozyme variation in germplasm accessions of the wild oat Avena sterilis L.

    Science.gov (United States)

    Phillips, T D; Murphy, J P; Goodman, M M

    1993-03-01

    Optimal exploitation of crop genetic resources requires a knowledge of the range and structure of the variation present in the gene pool of interest. Avena sterilis L., the cultivated oat progenitor, contains a store of genetic diversity that is readily accessible to the oat breeder. The objectives of the present paper were: (1) to evaluate isozyme polymorphisms in a sample of A. sterilis accessions from the U.S. National Small Grains Collection, (2) to analyze the distribution of isozyme diversity across the geographic range of the accessions, (3) to classify the accessions into groups based on isozyme variation, and (4) to suggest strategies for efficient sampling of this germplasm collection. One thousand and five accessions from 23 countries and 679 collection sites were screened for variation using 23 enzyme systems. Due to limited information about the genetic relationship among individual members of families of isozymes in hexaploid oat species, data were recorded solely for band presence. The frequencies of bands in accessions from the various countries were used to calculate the probability of genotypic identity (Ix.y), the probability of a unique genotype (Ux.y), and an adjusted polymorphic index (Hx). Accessions from Turkey and Lebanon had the largest polymorphic index values, Turkish and Moroccan accessions displayed the greatest numbers of bands. Accessions from Iran, Turkey, Iraq, and Lebanon had the largest mean probabilities of containing unique genotypes. Based on isozyme data, Turkey appeared to represent the center of diversity in this germplasm collection. Band frequencies calculated among countries were used in a principal component analysis. Accessions from Israel and Morocco clustered together; accessions from Iran, Iraq, Turkey, and Ethiopia formed another group; and Algerian accessions formed an outlying group. Several isozyme bands had a regional distribution. These results suggested that choosing accessions from countries based on their

  12. Rapid on-site detection of Acidovorax avenae subsp. citrulli by gold-labeled DNA strip sensor.

    Science.gov (United States)

    Zhao, Wenjun; Lu, Jie; Ma, Wenwei; Xu, Chuanlai; Kuang, Hua; Zhu, Shuifang

    2011-06-15

    Acidovorax avenae subsp. citrulli (AAC) is one of the most harmful diseases in cucurbit production. A rapid and sensitive DNA strip sensor was constructed based on gold nanoparticle-labeled oligonucleotide probes for the detection of AAC. Both the qualitative and semi-quantitative detections of target DNA were successfully achieved using the developed DNA strip sensor. The qualitative limit of detection (LOD) of the strip sensor was determined as 4 nM. The LOD for the semi-quantitative detection was calculated to be 0.48 nM in the range of 0-10 nM. The genomic DNA was detected directly using the DNA strip sensor without any further treatment. This DNA strip sensor is a potentially useful tool for rapid on-site DNA screening. Copyright © 2011 Elsevier B.V. All rights reserved.

  13. PROTEIN QUALITY EVALUATION OF NAKED OAT (AVENA NUDA L. AND BUCKWHEAT (FAGOPYRUM ESCULENTUM MOENCH BY BIOLOGICAL METHODS AND PDCAAS METHOD

    Directory of Open Access Journals (Sweden)

    Martina Vršková

    2013-02-01

    Full Text Available The aim of this paper was to determine the protein quality of naked oat (Avena nuda L. and buckwheat (Fagopyrum esculentum Moench by traditional biological methods [Protein Efficiency Ratio (PER, Net Protein Utilization (NPU, Biological value] and the protein digestibility-corrected amino acid score (PDCAAS. As an animal model we used growing rats at the age of 21 days and at average body weight 83 g. The tested feeds represented the only nitrogen source in the experimental diets, and the tested nitrogen substances were 10 % of the feed ration in dry matter. We found higher values achieved in growth, feed conversion and crude protein intake in the group fed buckwheat. Buckwheat achieved higher biological value. Oat achieved a higher digestibility, which was also influenced by higher PDCAAS. Buckwheat achieved higher biological protein value. Isoleucine was the limiting amino acid in both tested feeds. Other parameters of the evaluation of protein quality (PER, NPU had minimal differences.

  14. The occurrence of two species of Entomophthorales (Entomophthoromycota), pathogens of Sitobion avenae and Myzus persicae (Hemiptera: Aphididae), in Tunisia.

    Science.gov (United States)

    Ben Fekih, Ibtissem; Boukhris-Bouhachem, Sonia; Eilenberg, Jørgen; Allagui, Mohamed Bechir; Jensen, Annette Bruun

    2013-01-01

    The natural occurrence of entomophthoralean fungi pathogenic towards aphids on cereal and potato crops was investigated in the years 2009, 2010, and 2011. Infected aphids were sampled in three bioclimatic zones in Tunisia (Beja, Cap bon, and Kairouan) and fungal species were determined based on morphological characters such as shape, size, and number of nuclei in the primary conidia. Polymerase Chain Reaction (PCR) on the internal transcribed spacer 1 region (ITS1) was used to verify morphological determination. Both methods gave consistent results and we documented for the first time the natural occurrence of two fungal species from the order Entomophthorales (phylum Entomophthoromycota), Pandora neoaphidis and Entomophthora planchoniana. Both fungi were recorded on the aphid species Sitobion avenae and Myzus persicae on barley ears and potato leaves, respectively. Moreover, natural mixed infections by both species (P. neoaphidis and E. planchoniana) were documented on the target aphids. This investigation provides basic information of entomopathogenic fungi infecting economically important aphids in Tunisia.

  15. The Occurrence of Two Species of Entomophthorales (Entomophthoromycota, Pathogens of Sitobion avenae and Myzus persicae (Hemiptera: Aphididae, in Tunisia

    Directory of Open Access Journals (Sweden)

    Ibtissem Ben Fekih

    2013-01-01

    Full Text Available The natural occurrence of entomophthoralean fungi pathogenic towards aphids on cereal and potato crops was investigated in the years 2009, 2010, and 2011. Infected aphids were sampled in three bioclimatic zones in Tunisia (Beja, Cap bon, and Kairouan and fungal species were determined based on morphological characters such as shape, size, and number of nuclei in the primary conidia. Polymerase Chain Reaction (PCR on the internal transcribed spacer 1 region (ITS1 was used to verify morphological determination. Both methods gave consistent results and we documented for the first time the natural occurrence of two fungal species from the order Entomophthorales (phylum Entomophthoromycota, Pandora neoaphidis and Entomophthora planchoniana. Both fungi were recorded on the aphid species Sitobion avenae and Myzus persicae on barley ears and potato leaves, respectively. Moreover, natural mixed infections by both species (P. neoaphidis and E. planchoniana were documented on the target aphids. This investigation provides basic information of entomopathogenic fungi infecting economically important aphids in Tunisia.

  16. Precipitation and soil impacts on partitioning of subsurface moisture in Avena barbata: Observations from a greenhouse experiment

    Energy Technology Data Exchange (ETDEWEB)

    Salve, R.; Torn, M.S.

    2011-03-01

    The primary objective of this study was to assess the impact of two grassland soils and precipitation regimes on soil-moisture dynamics. We set up an experiment in a greenhouse, and monitored soil moisture dynamics in mesocosms planted with Avena barbata, an annual species found in California grasslands. By repeating the precipitation input at regular intervals, we were able to observe plant manipulation of soil moisture during well-defined periods during the growing season. We found that the amount of water partitioned to evapotranspiration, seepage, and soil storage varied among different growth stages. Further, both soil type and precipitation regimes had a significant impact on redistributing soil moisture. Whereas in the low-precipitation treatments most water was released to the atmosphere as evapotranspiration, major losses from the high-precipitation treatment occurred as gravity drainage. Observations from this study emphasize the importance of understanding intra-seasonal relationships between vegetation, soil, and water.

  17. Simultaneous detection of Acidovorax avenae subsp. citrulli and Didymella bryoniae in cucurbit seedlots using magnetic capture hybridization and real-time polymerase chain reaction.

    Science.gov (United States)

    Ha, Y; Fessehaie, A; Ling, K S; Wechter, W P; Keinath, A P; Walcott, R R

    2009-06-01

    To improve the simultaneous detection of two pathogens in cucurbit seed, a combination of magnetic capture hybridization (MCH) and multiplex real-time polymerase chain reaction (PCR) was developed. Single-stranded DNA hybridization capture probes targeting DNA of Acidovorax avenae subsp. citrulli, causal agent of bacterial fruit blotch, and Didymella bryoniae, causal agent of gummy stem blight, were covalently attached to magnetic particles and used to selectively concentrate template DNA from cucurbit seed samples. Sequestered template DNAs were subsequently amplified by multiplex real-time PCR using pathogen-specific TaqMan PCR assays. The MCH multiplex real-time PCR assay displayed a detection threshold of A. avenae subsp. citrulli at 10 CFU/ml and D. bryoniae at 10(5) conidia/ml in mixtures of pure cultures of the two pathogens, which was 10-fold more sensitive than the direct real-time PCR assays for the two pathogens separately. Although the direct real-time PCR assay displayed a detection threshold for A. avenae subsp. citrulli DNA of 100 fg/microl in 25% (1/4 samples) of the samples assayed, MCH real-time PCR demonstrated 100% detection frequency (4/4 samples) at the same DNA concentration. MCH did not improve detection sensitivity for D. bryoniae relative to direct real-time PCR using conidial suspensions or seed washes from D. bryoniae-infested cucurbit seed. However, MCH real-time PCR facilitated detection of both target pathogens in watermelon and melon seed samples (n = 5,000 seeds/sample) in which 0.02% of the seed were infested with A. avenae subsp. citrulli and 0.02% were infested with D. bryoniae.

  18. Resposta da aveia preta (Avena strigosa Schreb à irrigação por aspersão e adubação nitrogenada = Response of black oats (Avena strigosa Schreb on the aspersion irrigation and nitrogen fertilization

    Directory of Open Access Journals (Sweden)

    Pedro Henrique de Cerqueira Luz

    2008-07-01

    Full Text Available O objetivo do estudo foi avaliar os efeitos da adubação nitrogenada e da irrigação por aspersão no crescimento e na produção de massa seca (MS da aveia preta (Avena strigosa Schreb. Foram avaliadas quatro doses de nitrogênio (0, 50, 100 e 150 kg de N ha-1 e, também, a presença ou ausência de irrigação. Foram determinadas as seguintesvariáveis: altura de planta, produção de massa seca, taxa de crescimento e o teor de MS. Quando irrigada, a altura da planta foi maior, refletindo maior produção de massa seca. Na área de sequeiro, o teor de MS foi superior (24,7% ao da área irrigada (18,7%. Quanto à adubação nitrogenada, houve resposta somente para altura de planta, com comportamento linear, quando da utilização de irrigação. Os efeitos da irrigação foram mais determinantes para a produção da aveia preta que a adubação nitrogenada.The objective of the study was assessing the effect of the nitrogen and the aspersion irrigation on the growth and dry matter yield of black oats (Avena strigosa Schreb. The experiment was conducted in the Campus of USP in Pirassununga, São Paulo State. In the study were evaluated four nitrogen levels (0, 50, 100 and 150 kg of N ha-1 and also the presence or absence of the irrigation. The plant variablesevaluated were: mean height, dry matter percentage, yield and growth rate. The results had disclosed to greater height of plant in the irrigated condition, reflecting in the higher production of dry matter. In dry land area, percentage of DM was 24.7% and in irrigatedarea 18.7%. The nitrogen was significantly only for plant mean height that showed linear fit when carried through the irrigation. The effect of the irrigation was better for the production of black oats than nitrogen.

  19. Implications of Environmental Stress during Seed Development on Reproductive and Seed Bank Persistence Traits in Wild Oat (Avena fatua L.

    Directory of Open Access Journals (Sweden)

    E. Patrick Fuerst

    2013-07-01

    Full Text Available Weeds produce seed under a wide range of conditions, depending on timing of emergence, prevailing crop, soil microsites, and climatic conditions, among other factors. We hypothesized that the maturation environment during weed seed development will influence reproductive allocation and seed persistence traits, such as seed dormancy and vigor, and needs to be considered when formulating weed management strategies. This research evaluated the effects of shade and drought stress on reproductive allocation, seed dormancy and seed vigor in select lines of wild oat (Avena fatua L.. Plants were grown in the greenhouse under drought stress and shade. Harvested seed were subjected to controlled after-ripening and aging regimes. Drought and shade reduced reproductive allocation and resulted in seed with less intense primary dormancy compared to the plants grown under resource-rich conditions, but had no apparent effect on seed vigor. Our data provide additional support to the hypothesis that seed dormancy within a species is a highly plastic trait that can be strongly influenced by the growth conditions of the mother plant. Such plasticity may have important implications for establishing ecologically-based weed control criteria on which threshold-based weed management systems are implemented.

  20. Self-paired monoclonal antibody lateral flow immunoassay strip for rapid detection of Acidovorax avenae subsp. citrulli.

    Science.gov (United States)

    Zeng, Haijuan; Guo, Wenbo; Liang, Beibei; Li, Jianwu; Zhai, Xuzhao; Song, Chunmei; Zhao, Wenjun; Fan, Enguo; Liu, Qing

    2016-09-01

    We screened a highly specific monoclonal antibody (McAb), named 6D, against Acidovorax avenae subsp. citrulli (Aac). Single McAb 6D was used as both nanogold-labeled antibody and test antibody to develop a single self-paired colloidal gold immunochromatographic test strip (Sa-GICS). The detection limit achieved using the Sa-GICS approach was 10(5) CFU/mL, with a result that can be observed by the naked eye within 10 min. Moreover, Sa-GICS can detect eight strains of Aac and display no cross-reactions with other pathogenic plant microorganisms. Artificial contamination experiments demonstrated that Sa-GICS would not be affected by impurities in the leaves or stems of the plants and were consistent with the PCR results. This is the first report on the development of a colloidal gold immunoassay strip with self-paired single McAb for the rapid detection of Aac. Graphical Abstract Schematic representation of the test strip.

  1. Orco mediates olfactory behaviors and winged morph differentiation induced by alarm pheromone in the grain aphid, Sitobion avenae.

    Science.gov (United States)

    Fan, Jia; Zhang, Yong; Francis, Frédéric; Cheng, Dengfa; Sun, Jingrun; Chen, Julian

    2015-09-01

    Olfaction is crucial for short distance host location and pheromone detection by insects. Complexes of olfactory receptors (ORs) are composed of odor-specific ORs and OR co-receptors (Orco). Orcos are widely co-expressed with odor-specific ORs and are conserved across insect taxa. A number of Orco orthologs have been studied to date, although none has been identified in cereal aphids. In this study, an Orco gene ortholog was cloned from the grain aphid, Sitobion avenae, and named "SaveOrco"; RNA interference (RNAi) reduced the expression of SaveOrco to 34.11% in aphids, resulting in weaker EAG (electroantennogram) responses to plant volatiles (Z-3-hexene-1-ol; methyl salicylate, MeSA) and aphid alarm pheromone (E-β-farnesene, EBF). Aphid wing differentiation induced by EBF was investigated in both RNAi treated and untreated aphids. EBF induced production of winged aphids in both pre-natal and post-natal periods in untreated aphids, but no such induction was observed in the RNAi-treated aphids. We conclude that SaveOrco is crucial for the aphid's response to pheromones and other volatiles, and is involved in wing differentiation triggered by EBF. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

  2. [Lipid and metabolic profiles in adolescents are affected more by physical fitness than physical activity (AVENA study)].

    Science.gov (United States)

    García-Artero, Enrique; Ortega, Francisco B; Ruiz, Jonatan R; Mesa, José L; Delgado, Manuel; González-Gross, Marcela; García-Fuentes, Miguel; Vicente-Rodríguez, Germán; Gutiérrez, Angel; Castillo, Manuel J

    2007-06-01

    To determine whether the level of physical activity or physical fitness (i.e., aerobic capacity and muscle strength) in Spanish adolescents influences lipid and metabolic profiles. From a total of 2859 Spanish adolescents (age 13.0-18.5 years) taking part in the AVENA (Alimentación y Valoración del Estado Nutricional en Adolescentes) study, 460 (248 male, 212 female) were randomly selected for blood analysis. Their level of physical activity was determined by questionnaire. Aerobic capacity was assessed using the Course-Navette test. Muscle strength was evaluated using manual dynamometry, the long jump test, and the flexed arm hang test. A lipid-metabolic cardiovascular risk index was derived from the levels of triglycerides, low-density lipoprotein cholesterol (LDLC), high-density lipoprotein cholesterol (HDLC), and glucose. No relationship was found between the level of physical activity and lipid-metabolic index in either sex. In contrast, there was an inverse relationship between the lipid-metabolic index and aerobic capacity in males (P=.003) after adjustment for physical activity level and muscle strength. In females, a favorable lipid-metabolic index was associated with greater muscle strength (P=.048) after adjustment for aerobic capacity. These results indicate that, in adolescents, physical fitness, and not physical activity, is related to lipid and metabolic cardiovascular risk. Higher aerobic capacity in males and greater muscle strength in females were associated with lower lipid and metabolic risk factors for cardiovascular disease.

  3. Contrasting Roles of Deoxynivalenol and Nivalenol in Host-Mediated Interactions between Fusarium graminearum and Sitobion avenae

    Directory of Open Access Journals (Sweden)

    Jassy Drakulic

    2016-11-01

    Full Text Available Fusarium graminearum is the predominant causal species of Fusarium head blight in Europe and North America. Different chemotypes of the species exist, each producing a plethora of mycotoxins. Isolates of differing chemotypes produce nivalenol (NIV and deoxynivalenol (DON, which differ in toxicity to mammals and plants. However, the effect of each mycotoxin on volatile emissions of plant hosts is not known. Host volatiles are interpreted by insect herbivores such as Sitobion avenae, the English grain aphid, during host selection. Previous work has shown that grain aphids are repelled by wheat infected with DON-producing F. graminearum, and this study seeks to determine the influence of pathogen mycotoxins to host volatile chemistry. Volatile collections from infected hosts and olfactometer bioassays with alate aphids were performed. Infections with isolates that produced DON and NIV were compared, as well as a trichothecene deficient transformant derived from the NIV-producing isolate. This work confirmed the repellent nature of infected hosts with DON accumulation. NIV accumulation produced volatiles that were attractive to aphids. Attraction did not occur when NIV was absent and was, therefore, a direct consequence of NIV production.

  4. Short communication: Evaluation of a model for predicting Avena fatua and Descurainia sophia seed emergence in winter rapeseed

    Directory of Open Access Journals (Sweden)

    Mohammad A. Aboutalebian

    2017-07-01

    Full Text Available Avena fatua and Descurainia sophia are two important annual weeds throughout winter rapeseed (Brassica napus L. production systems in the semiarid region of Iran. Timely and more accurate control of both species may be developed if there is a better understanding of its emergence patterns. Non-linear regression techniques are usually unable to accurately predict field emergence under such environmental conditions. The objectives of this research were to evaluate the emergence patterns of A. fatua and D. sophia and determine if emergence could be predicted using cumulative soil thermal time in degree days (CTT. In the present work, cumulative seedling emergence from a winter rapeseed field during 3 years data set was fitted to cumulative soil CTT using Weibull and Gompertz functions. The Weibull model provided a better fit, based on coefficient of determination (R2sqr, root mean square of error (RMSE and Akaike index (AICd, compared to the Gompertz model between 2013 and 2016 seasons for both species. Maximum emergence of A. fatua occured 70-119 days after sowing or after equals 329-426 °Cd, while in D. sophia it occurred 119-134 days after sowing rapeseed equals 373-470 °Cd. Both models can aid in the future study of A. fatua and D. sophia emergence and assist growers and agricultural professionals with planning timely and more accurate A. fatua and D. sophia control.

  5. Isolation and Identification of Potential Allelochemicals from Aerial Parts of Avena fatua L. and Their Allelopathic Effect on Wheat.

    Science.gov (United States)

    Liu, Xingang; Tian, Fajun; Tian, Yingying; Wu, Yanbing; Dong, Fengshou; Xu, Jun; Zheng, Yongquan

    2016-05-11

    Five compounds (syringic acid, tricin, acacetin, syringoside, and diosmetin) were isolated from the aerial parts of wild oats (Avena fatua L.) using chromatography columns of silica gel and Sephadex LH-20. Their chemical structures were identified by means of electrospray ionization and high-resolution mass spectrometry as well as (1)H and (13)C nuclear magnetic resonance spectroscopic analyses. Bioassays showed that the five compounds had significant allelopathic effects on the germination and seedling growth of wheat (Triticum aestivum L.). The five compounds inhibited fresh wheat as well as the shoot and root growth of wheat by approximately 50% at a concentration of 100 mg/kg, except for tricin and syringoside for shoot growth. The results of activity testing indicated that the aerial parts of wild oats had strong allelopathic potential and could cause different degrees of influence on surrounding plants. Moreover, these compounds could be key allelochemicals in wild-oat-infested wheat fields and interfere with wheat growth via allelopathy.

  6. Impact of biotic and abiotic stresses on the competitive ability of multiple herbicide resistant wild oat (Avena fatua).

    Science.gov (United States)

    Lehnhoff, Erik A; Keith, Barbara K; Dyer, William E; Menalled, Fabian D

    2013-01-01

    Ecological theory predicts that fitness costs of herbicide resistance should lead to the reduced relative abundance of resistant populations upon the cessation of herbicide use. This greenhouse research investigated the potential fitness costs of two multiple herbicide resistant (MHR) wild oat (Avena fatua) populations, an economically important weed that affects cereal and pulse crop production in the Northern Great Plains of North America. We compared the competitive ability of two MHR and two herbicide susceptible (HS) A. fatua populations along a gradient of biotic and abiotic stresses The biotic stress was imposed by three levels of wheat (Triticum aestivum) competition (0, 4, and 8 individuals pot(-1)) and an abiotic stress by three nitrogen (N) fertilization rates (0, 50 and 100 kg N ha(-1)). Data were analyzed with linear mixed-effects models and results showed that the biomass of all A. fatua populations decreased with increasing T. aestivum competition at all N rates. Similarly, A. fatua relative growth rate (RGR) decreased with increasing T. aestivum competition at the medium and high N rates but there was no response with 0 N. There were no differences between the levels of biomass or RGR of HS and MHR populations in response to T. aestivum competition. Overall, the results indicate that MHR does not confer growth-related fitness costs in these A. fatua populations, and that their relative abundance will not be diminished with respect to HS populations in the absence of herbicide treatment.

  7. CONCENTRAÇÃO DE b -GLUCANAS NAS DIFERENTES ETAPAS DO PROCESSAMENTO DA AVEIA (Avena sativa L. OAT (Avena sativa L. b -GLUCAN CONCENTRATION IN DIFFERENT PROCESSING STAGES

    Directory of Open Access Journals (Sweden)

    Roberta Marins DE SÁ

    1998-10-01

    Full Text Available As b-glucanas são fibras solúveis presentes em grande quantidade na aveia e têm importante ação na redução do colesterol sangüíneo em indivíduos com hipercolesterolemia, entre outras propriedades. Pouco se conhece em relação a este polímero em produtos brasileiros. Além disso, para ser consumida, a aveia passa por várias etapas de processamento, que poderiam alterar seu conteúdo de b-glucanas. Este trabalho avaliou a concentração de b-glucanas no cultivar de aveia IAC 7 e seus produtos, para verificar se existe alteração no teor desta fibra no decorrer do processamento. O farelo apresentou o maior teor de b-glucanas (9,51± 2,08%, diferindo estatisticamente dos demais produtos (Pb-glucanas dos demais produtos avaliados (aveia descascada, tostada, cortada, flocos inteiros, flocos e flocos finos, indicando que o processamento não tem influência no teor desta fibra no produto final.. b-glucans are soluble fibers which are quite abundant in oats. One of their many important properties is their capacity to lower blood cholesterol in individuals with hipercholesterolemy. Very little is known about this polymer in Brazilian food products. Besides, in order to be consumed as human food, the oats have to undergo several processing steps that may alter their original b-glucan concentration. The aim of this study was to measure this nutrient in cultivar IAC 7 and its products to determine if processing had any influence on the overall b-glucan content. Oat bran presented the highest values (9.51± 2.08% and was found to be significantly different from the other products (Pb-glucan contents of the other products, suggesting that processing had minimum or no effect on the concentration of this fiber.

  8. Proyecto de factibilidad para la producción y distribución de una bebida fortificante a base de avena en la ciudad de Quito

    OpenAIRE

    Silva Vaca, Giovanny Paúl

    2012-01-01

    En la presente investigación se pretende demostrar la factibilidad para la implementación de una microempresa dedicada a la producción y distribución de una bebida fortificada a base de avena en el Sur de Quito, esta idea nace de la necesidad de las personas en consumir alimentos sanos, nutritivos y a un precio accesible, de tal manera que se pueda preservar la salud ya que está comprobado que la mala nutrición vacía las reservas de grasas y proteínas del cuerpo, llegando ...

  9. Estudio comparativo de la estabilidad lipídica de harinas de soja, sorgo, avena, salvado y germen de trigo con y sin extrusión

    OpenAIRE

    María José Crosa Balestra; Ana Curia; Ana Curutchet; Mónica Cadenazzi; Gabriela Dotta; Verónica Ferreyra; Fabiana Maidana; Laura Souto; Jorge Escudero

    2013-01-01

    El consumo de harinas de grano entero está condicionado por la pérdida de calidad nutricional, funcional y sensorial durante su almacenamiento. En este estudio se evaluó el efecto del proceso de extrusión en la degradación lipídica de harina de varios tipos de granos y derivados (soja, sorgo, avena, salvado y germen de trigo). Se realizó seguimiento de ácidos grasos libres, humedad, actividad de agua y del desarrollo del descriptor “rancio-oxidado” por olfatación directa, en muestras de harin...

  10. Identification and analysis of proteins that interact with the Avena fatua homologue of the maize transcription factor VIVIPAROUS 1.

    Science.gov (United States)

    Jones, H D; Kurup, S; Peters, N C; Holdsworth, M J

    2000-01-01

    The Avena fatua (wild oat) homologue of VIVIPAROUS 1 (AfVP1) has been implicated in controlling the maintenance of embryo dormancy in mature imbibed seeds, but the detailed mechanisms by which this transcription factor family activates embryo maturation pathways and simultaneously represses germination are not known. A two-hybrid screen in yeast identified three proteins that interacted specifically with AfVP1 (AfVP1 interacting proteins; AfVIPs). AfVIPs 2 and 3 interacted with the C-terminus of AfVP1, which contains the B2 + B3 domains, previously shown to bind DNA, whereas AfVIP1 interacted with the isolated B3 domain. Using purified proteins in in vitro experiments, all three AfVIPs were shown also to interact with the Arabidopsis homologue ABSCISIC ACID INSENSITIVE 3 (ABI3). The three AfVIPs were expressed in both dormant and non-dormant embryos, but the abundance of AfVIP1 and 3 transcripts was greater in germinated than dormant seeds, whereas transcripts of AfVIP2 (and AfVP1) were more highly expressed in dormant embryos. The AfVIP3 protein has homology to a human cell-crisis gene with a predicted role in the cell cycle; AfVIP2 contains a ring-type zinc finger motif. These homologies, together with analysis of expression studies, suggest that these proteins may play specific roles in AfVP1-mediated regulation of the dormancy to germination transition in A. fatua seeds.

  11. Genotype and environment interact to control dormancy and differential expression of the VIVIPAROUS 1 homologue in embryos of Avena fatua.

    Science.gov (United States)

    Jones, H D; Peters, N C; Holdsworth, M J

    1997-10-01

    Embryo dormancy is a reversible developmental state during which germination is repressed. In this study, inbred lines of Avena fatua were used to analyse the influence of genotype and environment on the dormant phenotype, and on expression of the homologue of the maize transcription factor VIVIPAROUS 1 (afVP 1). The cDNA for afVP 1 was cloned from mature embryos. Analysis of the predicted protein sequence revealed a high degree of similarity to other VP 1/ABI 3-related transcription factors, in particular in four regions previously shown to be highly conserved, including the BR2 region that has been shown to interact with several classes of sequence-specific DNA binding proteins. The potential of imbibed mature embryos for dormancy was analysed and shown to be determined primarily by genotype and secondarily by previous environmental experience of the mature seed acting on embryo genotype. Under all conditions studied, expression of afVP 1 and the A. fatua homologue of Em (shown in maize to be regulated by VP 1 during embryo maturation) were positively correlated with the dormant phenotype, whereas expression of A. fatua AMY-related RNAs was negatively correlated with dormancy (in barley AMY 6-4 has been shown to be repressed by VP 1). Expression of afVP 1 RNA was also shown in the dry seed to be positively correlated with the length of time required for seeds of the inbred lines to after-ripen. These results suggest new functions for the VP 1 transcription factor family in the control of dormancy-related processes in embryo cells of mature seeds, and the up-regulation of afVP 1 and afEm RNAs in the dormant state suggests that they are regulated by a switching mechanism in the mature seed that shows some aspects of reversibility.

  12. Characterization of cDNA clones for differentially expressed genes in embryos of dormant and nondormant Avena fatua L. caryopses.

    Science.gov (United States)

    Johnson, R R; Cranston, H J; Chaverra, M E; Dyer, W E

    1995-04-01

    The molecular regulation of seed dormancy was investigated using differential display to visualize and isolate cDNAs representing differentially expressed genes during early imbibition of dormant and nondormant Avena fatua L. embryos. Of about 3000 cDNA bands examined, 5 cDNAs hybridized with mRNAs exhibiting dormancy-associated expression patterns during the first 48 h of inhibition, while many more nondormancy-associated cDNAs were observed. Dormancy-associated clone AFD1 hybridized with a 1.5 kb mRNA barely detectable in dry dormant and nondormant embryos that became more abundant in dormant embryos after 24 h of imbibition. Clone AFD2 hybridized with two mRNAs, a 1.3 kb message constitutively expressed in dormant and nondormant embryos and a 0.9 kb message present at higher levels in dormant embryos after 3 h of imbibition. Nondormancy-associated clones AFN1, AFN2 and AFN3 hybridized with 1.5 kb, 1.7 kb and 1.1 kb mRNAs, respectively, that were more abundant in nondormant embryos during imbibition. Expression patterns of some mRNAs in dormant embryos induced to germinate by GA3 treatment were different than water controls, but were not identical to those observed in nondormant embryos. DNA sequence analysis revealed 76% sequence identity between clone AFN3 and a Citrus sinensis glutathione peroxidase-like cDNA, while significant sequence similarities with known genes were not found for other clones. Southern hybridization analyses showed that all clones represent low (1 to 4) copy number genes.

  13. Lopsided oat (Avena strigosa as a new summer annual cover crop for weed suppression in Central Europe

    Directory of Open Access Journals (Sweden)

    Brust, Jochen

    2012-03-01

    Full Text Available Lopsided oat (Avena strigosa has been cultivated for many years, especially in Brazil, as a summer annual cover crop. Experiments were conducted in Stuttgart-Hohenheim in 2010 to estimate the capability of lopsided oat, yellow mustard (Sinapis alba, phacelia (Phacelia tanacetifolia and a cover crop mixture to suppress weeds and volunteer wheat. A pot experiment was conducted to analyze the emergence and growth of the different cover crop species. Twelve weeks after planting, lopsided oat produced 20.7 dt/ha of shoot- and 5.5 dt/ha of root dry matter. A field experiment was established in the summer after harvest of winter wheat. The soil was cultivated with a disc harrow and the cover crops were sown one day later. At four week intervals, the plant density and dry matter of cover crops, weeds and volunteer wheat were determined. Twelve weeks after planting, lopsided oat produced 17.8 dt/ha shoot- and 6.2 dt/ha root dry matter. In the lopsided oat plots, shoot dry matter of weeds and volunteer wheat were reduced by 98 % compared with control plots without cover crops. This was the highest weed reduction of all cover crops studied. The root dry matter of weeds and volunteer wheat was reduced by 55 % to 97 % in all cover crops, compared to the control plots. Lopsided oat reduced the plant density of weeds and volunteer wheat. While there were 54.5 plants/m² in the control plots, only 5.5 plants/m² were counted in the lopsided oat plots. The results showed that lopsided oat has a high potential for suppression of weeds and volunteer wheat in autumn. It also enlarges the number of cultivated cover crops in Central Europe.

  14. Development of surface plasmon resonance imaging for detection of Acidovorax avenae subsp. citrulli (Aac) using specific monoclonal antibody.

    Science.gov (United States)

    Puttharugsa, Chokchai; Wangkam, Thidarat; Huangkamhang, Nongluck; Gajanandana, Oraprapai; Himananto, Orawan; Sutapun, Boonsong; Amarit, Ratthasart; Somboonkaew, Armote; Srikhirin, Toemsak

    2011-01-15

    An immunosensor based on surface plasmon resonance imaging (SPR imaging) using a specific monoclonal antibody 11E5 (MAb 11E5) was developed for the detection of the seed-borne bacterium Acidovorax avenae subsp. citrulli (Aac), which causes fruit blotch in watermelons and cantaloupes, and compared to the conventional ELISA technique. The 1:40 mixed self-assembled monolayer (mixed SAM) surface was used for the immobilized MAb 11E5 on sensor surface for the detection of Aac. Both whole cells and broken cells of Aac were tested by using direct and sandwich detection assay. The limit of detection (LOD) of Aac using the SPR imaging technique and a direct detection assay was 10(6)cfu/ml and a subsequent amplification of the SPR signal using a polyclonal antibody (PAb) lowered the LOD to 5×10(5) cfu/ml. The LOD for the ELISA technique was 5×10(4) cfu/ml for the detection of Aac, which was slightly better than that for the SPR technique. However, the sensor surface based on SPR imaging offered a major advantage in terms of surface regeneration, allowing at least five cycles with a shorter time assay, multi-channel analysis with an application on multiplex detection, and an ease of the surface usage for the detection of Aac in the naturally infected plant. The surface was tested against the naturally infected sample and showed good selectivity toward the Aac bacteria. Copyright © 2010 Elsevier B.V. All rights reserved.

  15. Eating habits and total and abdominal fat in Spanish adolescents: influence of physical activity. The AVENA study.

    Science.gov (United States)

    Gómez-Martínez, Sonia; Martínez-Gómez, David; Perez de Heredia, Fatima; Romeo, Javier; Cuenca-Garcia, Magdalena; Martín-Matillas, Miguel; Castillo, Manuel; Rey-López, Juan-Pablo; Vicente-Rodriguez, German; Moreno, Luis; Marcos, Ascensión

    2012-04-01

    To evaluate the association between specific dietary habits and body fatness in Spanish adolescents, and to analyze the role of leisure-time physical activity (LTPA) in this association. In this cross-sectional study, 1,978 adolescents (1,017 girls) aged 13.0-18.5 years from the AVENA (Alimentación y Valoración del Estado Nutricional en Adolescentes) study were included. Particular dietary habits (breakfast, mid-morning snack, lunch, afternoon snack, dinner, and nighttime snack, as well as time spent eating, number of meals, consumption of soft drinks, and ready-to-eat foods) and LTPA were self-reported and analyzed as dichotomic variables (yes/no). The sum of six skinfold thicknesses and waist circumference (WC) values were the main body fatness variables. Skinfolds and WC values were lower in adolescents who reported consumption of mid-morning snack, afternoon snack, more than four meals per day, and an adequate speed of eating, independently of participation in LTPA. Moreover, a beneficial influence of breakfast consumption on skinfolds and WC values was observed in those adolescent boys who did not participate in LTPA (p for interactions = .044 and .040, respectively). In Spanish adolescents, certain healthy dietary habits (i.e., mid-morning snack, afternoon snack, > 4 meals per day, adequate eating speed) are associated with lower body fatness, independently of engaging in LTPA. In addition, among boys with non-LTPA, those who skipped breakfast showed the highest body fatness values, indicating a beneficial influence of daily breakfast on body fat in this particular group. Copyright © 2012 Society for Adolescent Health and Medicine. Published by Elsevier Inc. All rights reserved.

  16. Impact of storage conditions on seed germination and seedling growth of wild oat (Avena fatua L. at different temperatures

    Directory of Open Access Journals (Sweden)

    Marija Sarić-Krsmanović

    2015-12-01

    Full Text Available The influence of seed storage conditions and different temperatures (5˚C, 10˚C, 15˚C, 20˚C, 25˚C, 30˚C and 26˚C/21˚C during germination and seedling development on seed germination, shoot length and germination rate of wild oat (Avena fatua L. was examined. Germinated seeds were counted daily over a period of ten days and shoot length was measured on the last day, while germination rates were calculated from those measurements. The results showed that seed storage under controlled conditions (T1: temperature 24±1°C, humidity 40-50%; T2: temperature 26±1°C, humidity 70-80% and T3: temperature 4˚C for periods of 3 (t1 and 12 (t2 months had a significant influence on germination of wild oat seeds. The percentage of germinated seeds under all examined temperatures was higher when they were stored for 12 months under controlled temperature and humidity. The results also showed that temperature had a significant effect on the percentage of germination and germination rate of A. fatua seeds. The highest total germination occurred at 15˚C temperature (T1: t1 - 41.25%, t2 - 44.37%; T2: t1 - 28.13%, t2 - 34.37%; T3: t1 - 10.63%, t2 - 12.50%. Germination percentage under an alternating day /night photoperiod at 26˚C/21˚C temperature was higher in all treatment variants (T1: t1 - 8.13%, t2 - 10.00%; T2: t1 - 11.87%, t2 - 13.13%; T3: t1 - 2.42%, t2 - 2.70% than germination in the dark at 25˚C, 30˚C and 5˚C.

  17. Respuesta productiva de conejos alimentados con forraje verde hidropónico de avena, como reemplazo parcial de concentrado comercial

    Directory of Open Access Journals (Sweden)

    Poblete Pérez Cecilia Eva

    2011-06-01

    Full Text Available La respuesta productiva de conejos raza californiana alimentados con forraje verde hidropónico (FVH deavena como reemplazo parcial de concentrado comercial (CC, fue evaluada en condiciones de desiertoen el norte de Chile. Se establecieron cinco tratamientos de alimentación, equivalentes a 0, 25, 50, 75 y100% de reemplazo de la dieta diaria con FVH, el cual fue cosechado y utilizado directamente diez díasdespués de la siembra. Cuarenta y cinco conejos destetados a los 31 días fueron evaluados en un diseñocompletamente al azar hasta alcanzar un peso de sacrificio de 2 kg de peso vivo. La calidad del FVH deavena fue considerada como buena, presentando similar valor nutritivo que el CC. Las variables evaluadasy sus respectivos rangos fueron: consumo de materia seca promedio (59.17 - 104.73 g/día, gananciade peso vivo promedio (16.35 - 29.10 g/animal por día, conversión alimenticia promedio (3.31 - 3.93 kgMS/kg PV, tiempo de peso vivo a sacrificio (53 - 91 días, peso vivo final (1430 - 2044 g/animal, pesode la canal (1235 - 1385 g/animal y rendimiento de la canal (59.19 - 62.25%. El reemplazo de hasta50% de la dieta base con FVH de avena no afectó significativamente (P ≤ 0.05 el consumo de alimento,tiempo de peso vivo a sacrificio, peso vivo final y rendimiento de la canal, haciendo posible su uso comorecurso forrajero alternativo en la alimentación de conejos en etapa de engorde en condiciones de desierto.

  18. Evolving California genotypes of Avena barbata are derived from multiple introductions but still maintain substantial population structure

    Directory of Open Access Journals (Sweden)

    Kate Crosby

    2014-11-01

    Full Text Available Multiple introductions are thought to enhance the chance of successful colonization, in part because recombination may generate adaptive variation to a new environment. Avena barbata (slender wild oat is a successful colonist in California, historically noted for striking genetic divergence into two multilocus genotypes, but is still undergoing adaptive change. We sought to understand whether multiple introductions might be contributing to this change. We used cpDNA phylogeography of A. barbata within its home range and in its invaded range in California to determine the minimum number of separate introductions, and the spatial distribution of these introduced lineages. We collected from sites throughout the state of California, where it is an invasive species. Accessions from a representative portion of A. barbata’s full native range were obtained from germplasm repositories. We sequenced seven intergenic chloroplast DNA loci for A. barbata individuals both in California (novel geographic range and its ancestral range. 204 individuals were assayed for chloroplast haplotype within California using single strand conformational polymorphism SSCPs. Genome size was determined by flow cytometry. Californian accessions are tetraploid as expected, but their genome sizes were smaller than the Old World accessions. There were three haplotypes present in California that were identical to haplotypes in the native range. Within California, the presence of multiple haplotypes at a site was observed primarily in Northern and Central populations. Between populations there was still substantial structure with FST ∼ 0.33, due to a shallow latitudinal cline caused by a preponderance of xeric haplotypes in Southern California. There was a minimum of three seed introductions to California. Recombination is thus likely to occur, and contribute to adaptation in new range in this highly-selfing, invader.

  19. Shade and Drought Stress-Induced Changes in Phenolic Content of Wild Oat (Avena fatua L. Seeds

    Directory of Open Access Journals (Sweden)

    Gallagher Robert S.

    2010-11-01

    Full Text Available Plants develop under a wide range of maternal environments, depending on the time of emergence, prevailing competition from other plants, and presence or absence of other biotic or abiotic stress factors. Stress factors, such as light limitation and drought, during plant development typically reduces the reproductive allocation to seeds, resulting in fewer and often smaller seeds. Such stress factors may also influence seed quality traits associated with persistence in the soil, such as seed dormancy and chemical defense. For this research, we hypothesized that light limitation and drought during wild oat (Avena fatua L. seed development would result in reduced allocation to seed phenolics and other aliphatic organic acids previously identified in the seeds of this species. Wild oat isolines (M73 and SH430 were grown in the greenhouse under cyclic drought conditions (2005 only or two levels of shade (50 and 70%; 2005 and 2006 achieved with standard black shade cloth. The soluble and cellular bound chemical constituents were identified and quantified using gas chromatography - mass spectrometry. The shade and drought stress treatments often significantly affected the mass of the caryopsis and hull seed fractions, as well as the phenolic content of these seed fractions, depending upon isoline, seed fraction, phenolic fraction, and specific phenolics analyzed. Phenolic content of the hull was reduced by the stress environments by up to 48%, whereas there was some evidence of an increase in the soluble phenolic content of the caryopsis in response to the stress environments. Ferulic and p-coumaric acids were the most abundant phenolic acids in both soluble and bound fractions, and bound phenolics comprised generally 95% or more of total phenolics. There was no discernable evidence that the aliphatic organic content was affected by the stress environments. Our results indicate that plant stress during seed development can reduce both the physical and

  20. Influences of nitrogen fertilization on the evolution of CO2 and yield in oat in a soil of Chimangual (Andisol, of Nariño department of Colombia Influencia de la fertilización nitrogenada sobre la evolución de CO2 y rendimiento de avena en un suelo de Chimangual (Andisol, departamento de Nariño - Colombia

    Directory of Open Access Journals (Sweden)

    Menjivar Juan

    2007-03-01

    Full Text Available The influence of nitrogen fertilization on microbial activity and yield of oat crop in a soil of Chimangual (Andisol of Nariño department of Colombia was mesasured. The experiment was designed using a factorial design arranged in a CBD. The three N sources consisted of: potassium nitrate, 13%N, ammonium sulfate 21%N and colacteos 27%N (a local nitrogen fertilizer. Also, three doses (25,75 y 150 kg N ha-1 and three application times were used: at sowing time, total at 45 days an fractional, 50% at sowing and 50% at 45 days after sowing. The higher respiration values at week 2 and 7 were observed after the higher dose of N (75 and 150 kg N ha-1 and fractional application were done. Potassium nitrate, colacteos and ammonium sulfate caused the higher increments in soil respiration and yield of green forage these fertilizer were applied at sowing time fractional and at 45 days respectively. Respiration positively correlated with yields of the established crop. Key words: Fertilizatión, respiration, yield, microbial activity, oat Avena sativa.En un diseño factorial con arreglo en BCA se analizó el efecto de tres fuentes de nitrógeno (nitrato de potasio 13% de N, sulfato de amonio 21% de N y colácteos 27% de N, este es una fuente local de fertilización, tres dosis (25, 75 y 150 kg N ha-1 y tres épocas de aplicación (a la siembra, a los 45 días y fraccionado sobre la actividad microbial y rendimiento de Avena sativa. Se encontraron valores de respiración más altos en las semanas 2 y 7 siguientes a la incorporación de las dosis más altas (75 y 150 kg N ha-1 y con las aplicaciones fraccionadas de los fertilizantes. El nitrato de potasio, colácteos y sulfato de amonio ocasionaron mayores incrementos en los valores de respiración del suelo y rendimiento de forraje verde cuando se aplicaron a la siembra, fraccionado y a los 45 días respectivamente. La respiración correlacionó positivamente con los rendimientos del cultivo establecido

  1. Characterization of three novel fatty acid- and retinoid-binding protein genes (Ha-far-1, Ha-far-2 and Hf-far-1) from the cereal cyst nematodes Heterodera avenae and H. filipjevi

    Science.gov (United States)

    Heterodera avenae and H. filipjevi are major parasites of wheat, reducing production worldwide. Both are sedentary endoparasitic nematodes, and their development and parasitism depend strongly on nutrients obtained from hosts. Secreted fatty acid- and retinoid-binding (FAR) proteins are nematode-spe...

  2. Proteomic and biochemical assays of glutathione-related proteins in susceptible and multiple herbicide resistant Avena fatua L.

    Science.gov (United States)

    Burns, Erin E; Keith, Barbara K; Refai, Mohammed Y; Bothner, Brian; Dyer, William E

    2017-08-01

    Extensive herbicide usage has led to the evolution of resistant weed populations that cause substantial crop yield losses and increase production costs. The multiple herbicide resistant (MHR) Avena fatua L. populations utilized in this study are resistant to members of all selective herbicide families, across five modes of action, available for A. fatua control in U.S. small grain production, and thus pose significant agronomic and economic threats. Resistance to ALS and ACCase inhibitors is not conferred by target site mutations, indicating that non-target site resistance mechanisms are involved. To investigate the potential involvement of glutathione-related enzymes in the MHR phenotype, we used a combination of proteomic, biochemical, and immunological approaches to compare their constitutive activities in herbicide susceptible (HS1 and HS2) and MHR (MHR3 and MHR4) A. fatua plants. Proteomic analysis identified three tau and one phi glutathione S-transferases (GSTs) present at higher levels in MHR compared to HS plants, while immunoassays revealed elevated levels of lambda, phi, and tau GSTs. GST specific activity towards 1-chloro-2,4-dinitrobenzene was 1.2-fold higher in MHR4 than in HS1 plants and 1.3- and 1.2-fold higher in MHR3 than in HS1 and HS2 plants, respectively. However, GST specific activities towards fenoxaprop-P-ethyl and imazamethabenz-methyl were not different between untreated MHR and HS plants. Dehydroascorbate reductase specific activity was 1.4-fold higher in MHR than HS plants. Pretreatment with the GST inhibitor NBD-Cl did not affect MHR sensitivity to fenoxaprop-P-ethyl application, while the herbicide safener and GST inducer mefenpyr reduced the efficacy of low doses of fenoxaprop-P-ethyl on MHR4 but not MHR3 plants. Mefenpyr treatment also partially reduced the efficacy of thiencarbazone-methyl or mesosulfuron-methyl on MHR3 or MHR4 plants, respectively. Overall, the GSTs described here are not directly involved in enhanced rates of

  3. Irradiation of residual muds and its use in the oat cultivation; Irradiacion de lodos residuales y su uso en el cultivo de avena

    Energy Technology Data Exchange (ETDEWEB)

    Moreno, A.J.; Colin, C.A.; Gomeztagle, M.M.; Frias, P.H. [Instituto Nacional de Investigaciones Nucleares, A.P. 18-1027, 11801 Mexico D.F. (Mexico)

    1997-07-01

    The irradiation of residual muds samples from a wastewater treatment plant at gamma radiation dose of 15 kGy removes from muds on average: fats and oils (33%), detergent (92%), phenols (50%) and over 99% of microorganisms of total account. The evaluation of irradiated residual mud and without irradiation as soil conditioner in oat growing (avena safira), was realized by triplicate, using different rates (80, 60, 40 and 20%) of frank sandy soil and irradiated and non-irradiated residual mud. The growing with rates 60/40 % of soil and irradiated mud respectively, resulted being more adequate as soil conditioner. It is important to clarify that for putting residual mud it is necessary that metals concentration not exceed the maximum permissible levels for the soil type and the corresponding growing. (Author)

  4. The effect of light quality on ethylene production in leaves of oat seedlings (Avena sativa L.)

    International Nuclear Information System (INIS)

    Corbineau, F.; Rudnicki, R.M.; Goszczynska, D.M.; Come, D.

    1995-01-01

    The effect of UV, blue, green, red, far-red and white fluorescent lights at a fluence of 1.5–20 μmol m −2 s −1 photon flux density (PFD) on endogenous and ACC-dependent ethylene production by etiolated and green apical oat-leaf segments was investigated. It was found that endogenous ethylene production in light-irradiated green and etiolated oat leaves depends upon light quality and its fluence. All light of the visible spectrum (400–700 nm) at PFD 5–20 μmol m −2 s −1 reduced conversion of ACC to ethylene in green oat leaves incubated in 10 −3 M ACC. Blue light was most effective in the inhibition of ACC-dependent ethylene production at 5–10 μmol m −2 s −1 PFD, and endogenous ethylene formation at 10 μmol m −2 s −1 PFD. At 20 μmol m −2 s −1 PFD, all visible light wavebands substantially reduced endogenous ethylene production but blue and red light were most effective. In etiolated leaves UV at 1.5 μmol m −2 s −1 PFD, enhanced endogenous ethylene production and other lights at 20 μmol m −2 s −1 PFD decreased evolution of ethylene, whereas ACC-dependent ethylene formation was stimulated by UV, red and far-red wavebands. Growth of 10-day old seedlings was reduced by 40% under continuous blue light irradiation relative to that obtained with white light. Irradiation of etiolated and green leaf segments for 18 hr with blue light reduced ACC oxidase activity when compared to dark-treated ones. The influence of light quality and its fluence rate on the control of ethylene biosynthesis in oat leaves is discussed. (author). (author)

  5. Productivity and seed health of husked oats (Avena sativa L. grown under different soil moisture conditions

    Directory of Open Access Journals (Sweden)

    Agnieszka Pszczółkowska

    2012-12-01

    Full Text Available The present study investigated the effect of different soil moisture content levels (60 - 70% SWC (soil water capacity - control; 30 - 35% SWC - water stress on yields, gas exchange parameters, seed health, and protein fractions of husked oat grain. The study showed that water deficit resulted in a decrease in grain weight per plant and a reduction in the gas exchange rates, primarily the photosynthesis and transpiration rates. Cladosporium cladosporioides was the dominant species on oat kernels in both experimental treatment options and in both years of the study. The presence of Fusarium poae was also found. Higher contents of prolamin, albumin and globulin fractions were found in the oat grain harvested from plants grown under soil water deficit conditions.

  6. Dynamics of auxin movement in the gravistimulated leaf-sheath pulvinus of oat (Avena sativa)

    Science.gov (United States)

    Brock, Thomas C.; Kapen, E. H.; Ghosheh, Najati S.; Kaufman, Peter B.

    1991-01-01

    The role of auxin redistribution in the graviresponse of the leaf-sheath pulvinus of oat was evaluated using H-3-indole-3-acetic acid (H-3-IAA) preloaded into isolated pulvini. Results obtained reveal that, while lateral transport of auxin occurs following gravistimulation, it is not necessary for a graviresponse. Localized changes in tissue responsiveness or the conversion of conjugated hormone to free hormone may suffice to drive the graviresponse.

  7. Isolation of Oat (Avena sativa L.) Total Proteins and Their Prolamin Fractions for 2D Electrophoresis.

    Science.gov (United States)

    Nałęcz, Dorota; Dziuba, Marta; Szerszunowicz, Iwona

    2017-01-01

    Appropriate sample preparation is essential to obtaining good results of two-dimensional gel electrophoresis (2-DE). For various reasons (particularly phenolic compounds, proteolytic enzymes, and cell-wall mucilages) the extraction of proteins from plant material, among them oat proteins, is difficult. During isolation all soluble substances that may interfere with the analysis (especially isoelectric focusing) are removed, and proteins of interest are separated from the remains. However, the applied procedure of isolation cannot be too extensive, because additional stages cause loss of the proteins.In this chapter, we describe a simple procedure for the isolation of oat total proteins and their prolamin fractions prior to 2-DE, without necessity of considerable purification. It can be used for oat protein fractionation, measurement of oat protein concentration, and their 2-DE analysis, with particular reference to prolamin fractions. The presented routine includes modified methods of plant seed proteins extraction and sequential Osborne extraction, based on oat protein solubility differences.

  8. Quantitative Trait Loci from Two Genotypes of Oat (Avena sativa) Conditioning Resistance to Puccinia coronata.

    Science.gov (United States)

    Babiker, Ebrahiem M; Gordon, Tyler C; Jackson, Eric W; Chao, Shiaoman; Harrison, Stephen A; Carson, Martin L; Obert, Don E; Bonman, J Michael

    2015-02-01

    Developing oat cultivars with partial resistance to crown rust would be beneficial and cost-effective for disease management. Two recombinant inbred-line populations were generated by crossing the susceptible cultivar Provena with two partially resistant sources, CDC Boyer and breeding line 94197A1-9-2-2-2-5. A third mapping population was generated by crossing the partially resistant sources to validate the quantitative trait locus (QTL) results. The three populations were evaluated for crown rust severity in the field at Louisiana State University (LSU) in 2009 and 2010 and at the Cereal Disease Laboratory (CDL) in St. Paul, MN, in 2009, 2010, and 2011. An iSelect platform assay containing 5,744 oat single nucleotide polymorphisms was used to genotype the populations. From the 2009 CDL test, linkage analyses revealed two QTLs for partial resistance in the Provena/CDC Boyer population on chromosome 19A. One of the 19A QTLs was also detected in the 2009 LSU test. Another QTL was detected on chromosome 12D in the CDL 2009 test. In the Provena/94197A1-9-2-2-2-5 population, only one QTL was detected, on chromosome 13A, in the CDL 2011 test. The 13A QTL from the Provena/94197A1-9-2-2-2-5 population was validated in the CDC Boyer/94197A1-9-2-2-2-5 population in the CDL 2010 and 2011 tests. Comparative analysis of the significant marker sequences with the rice genome database revealed 15 candidate genes for disease resistance on chromosomes 4 and 6 of rice. These genes could be potential targets for cloning from the two resistant parents.

  9. 2-DE Separation and Identification of Oat (Avena sativa L.) Proteins and Their Prolamin Fractions.

    Science.gov (United States)

    Nałęcz, Dorota; Szerszunowicz, Iwona; Dziuba, Marta; Minkiewicz, Piotr

    2017-01-01

    At present two-dimensional polyacrylamide gel electrophoresis (2-DE) is the most widely used proteomic tool, which enables simultaneous separation of even thousands of proteins with a high degree of resolution. The quality of 2-DE separation depends on the type of biological material used as a protein source. The presence of interfering compounds (e.g., phenols, as it is the fact in plant material including oat seeds) impedes 2-DE run. With the use of this technique it is possible to analyze the complex protein mixtures, characteristic protein fractions, as well as individual proteins.The purpose of this chapter is to describe the 2-DE technique (the separate stages of the first and the second dimension) for determining the oat protein composition (oat seed proteome), separation and preliminary identification of oat prolamin fractions. Electrophoretically separated proteins are identified on the basis of pI markers (identifying the location of both ends of an IPG strip) and on 2D SDS-PAGE standards. The gel images of oat proteins are analyzed with the help of ImageMaster 2D Platinum 6.0 program (Amersham Bioscience, part of GE Healthcare, Uppsala, Sweden). It allows finding unique spot identifiers for the occurrence of oat prolamin fractions in oat total proteins. The characteristic spots of similar shape and intensity (anchoring spots) and characteristic groups of spots can be searched for the purpose of identification.

  10. Effect of chemical systemic acquired resistance elicitors on avenanthramide biosynthesis in oat (Avena sativa).

    Science.gov (United States)

    Wise, Mitchell L

    2011-07-13

    Oats produce a group of phenolic antioxidants termed avenanthramides. These metabolites are, among food crops, unique to oats and have shown, in experimental systems, certain desirable nutritional characteristics such as inhibiting atherosclerotic plaque formation and reducing inflammation. Avenanthramides occur in both the leaves and grain of oat. In the leaves they are expressed as phytoalexins in response to crown rust (Puccina coronata) infection. The experiments reported here demonstrate that avenanthramide levels in vegetative tissue can be enhanced by treatment with benzothiadiazole (BTH), an agrochemical formulated to elicit systemic acquired resistance (SAR). The response to BTH was dramatically stronger than those produced with salicylic acid treatment. The roots of BTH treated plants also showed a smaller but distinct increase in avenanthramides. The dynamics of the root avenanthramide increase was substantially slower than that observed in the leaves, suggesting that avenanthramides might be transported from the leaves.

  11. Oat (Avena sativa L.): Oil and Nutriment Compounds Valorization for Potential Use in Industrial Applications.

    Science.gov (United States)

    Ben Halima, Nihed; Ben Saad, Rania; Khemakhem, Bassem; Fendri, Imen; Abdelkafi, Slim

    2015-01-01

    Oat is a promising plant for the future. It is edible and beneficial thanks to its nutritional, medicinal and pharmaceutical uses and, hence, recognized to be useful for a healthier world. The assessment of the vital functions of oat components is important for industries requiring correct health labelling, valid during the shelf life of any product. Oil, enzymes and other biomolecules of nutraceutic or dietary usage from oats would be valorized for this purpose. Although oats have a unique and versatile composition including antioxidants and biomolecules indispensable for health, they are undervalued in comparison with other staple cereals such as wheat, barley and rice. Furthermore, oats, apart from maize, comprise a high oil content used for a wide range of beneficial purposes. In addition, they contain beta glucan that has proven to be very helpful in reducing blood cholesterol levels and other cardiovascular diseases risks. In fact, there is diversity in the composition and content of the beneficial oat components within their genotypes and the different environmental conditions and, thus, oats are amenable to be enhanced by agronomic practices and genetic approaches.

  12. The spectrum of major seed storage genes and proteins in oats (Avena sativa).

    Science.gov (United States)

    Anderson, Olin D

    2014-01-01

    The oat seed storage proteins are mainly composed of two classes: the globulins and avenins. Among the major cereals, the globulins are the major seed protein class in rice and oats, and along with the higher protein content of oats is the basis for the relative higher nutrition content in oats compared to the other cereals. The second major class of oat seed proteins is the avenins; also classified as prolamins - seed proteins high in proline and glutamine amino acids. The prolamins are associated with celiac disease, an autoimmune disorder of the gastrointestinal tract. In spite of their importance, neither the oat globulins nor the avenins have been completely analyzed and described for any single germplasm. Using available EST resources for a single hexaploid oat cultivar, the spectrum of avenin and globulin sequences are described for the gene coding regions and the derived protein sequences. The nine unique avenin sequences are suggested to be divided into 3-4 distinct subclasses distributed in the hexaploid genome. The globulins from the same germplasm include 24 distinct sequences. Variation in globulin size results mainly from a glutamine-rich domain, similar to as in the avenins, and to variation in the C-terminal sequence domain. Two globulin genes have premature stop codons that shorten the resulting polypeptides by 9 and 17 amino acids, and eight of the globulin sequences form a branch of the globulins not previously reported. A more complete description of the major oat seed proteins should allow a more thorough analysis of their contributions to those oat seed characteristics related to nutritional value, evolutionary history, and celiac disease association.

  13. Proteomic analysis of salt-responsive proteins in oat roots (Avena sativa L.).

    Science.gov (United States)

    Bai, Jianhui; Liu, Jinghui; Jiao, Weihong; Sa, Rula; Zhang, Na; Jia, Ruizong

    2016-08-01

    Oat is considered as a moderately salt-tolerant crop that could be used to improve saline and alkaline soil. Previous studies have focused on short-term salt stress exposure (0.5-48 h), while molecular mechanisms of salt tolerance in oat remain unclear. Long-term salt stress (16 days) increased the levels of superoxide dismutase activity, peroxidase activity, malondialdehyde content, putrescine content, spermidine content and soluble sugar content and reduced catalase activity in oat roots. The stress also caused changes in protein profiles in the roots. At least 1400 reproducible protein spots were identified in a two-dimensional electrophoresis gel, among which 23 were differentially expressed between treated vs control plants and 13 were identified using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. These differentially expressed proteins are involved in five types of biological process: (1) two fructose-bisphosphate aldolases, four alcohol dehydrogenases, an enolase, a UDP-glucuronic acid decarboxylase and an F1-ATPase alpha subunit related to carbohydrate and energy metabolism; (2) a choline monooxygenase related to stress and defense; (3) a lipase related to fat metabolism; (4) a polyubiquitin related to protein degradation; (5) a 14-3-3 protein related to signaling. © 2015 Society of Chemical Industry. © 2015 Society of Chemical Industry.

  14. Evaluation of dietary fiber and beta-glucan levels in oat (Avena sativa L) cultivars

    OpenAIRE

    GUTKOSKI, Luiz C.; TROMBETTA, Cassiana

    1999-01-01

    A fibra alimentar é composta por celulose, hemiceluloses, gomas, pectinas e mucilagens sendo classificada em solúvel e insolúvel, quanto a sua solubilidade em água. As beta-glicanas são componentes da fibra alimentar solúvel presentes na aveia e sua importância é devido às propriedades funcionais e aos efeitos hipocolesterolêmicos e hipoglicêmicos apresentados. O presente trabalho tem como objetivo avaliar os teores de fibra alimentar solúvel, insolúvel e total e de beta-glicanas de cultivare...

  15. Efecto de la fertilización nitrogenada sobre la actividad microbial y rendimiento de avena forrajera en un suelo andisol del departamento de Nariño, Colombia

    Directory of Open Access Journals (Sweden)

    Silva P Amanda

    2006-03-01

    Full Text Available COMPENDIO La investigación evaluó los cambios en la actividad microbial por efecto de la aplicación de tres fuentes nitrogenadas al suelo: nitrato de potasio (13% de N y 44% de K20, sulfato de amonio (21% de N y 24% de S y colacteos (27% de N, 10% de K y 6% de P , en tres épocas de aplicación (a la siembra, a los 45 días y fraccionado y en tres dosis (25, 75 y 150 kg/ha, en un suelo Andisol de Pasto, Nariño, Colombia, localizado a 2820 msnm. y 12 0C. La actividad microbial se incrementó con la aplicación del fertilizante a la siembra y a los 45 días y con las dosis altas, sin importar la fuente utilizada. La época de aplicación no afectó el número de bacterias, ni la población de hongos pero sí la de actinomicetos, cuyo número se incrementó con la aplicación del fertilizante al momento de la siembra. Las dosis altas de nitrato de potasio incrementaron las poblaciones de bacterias y actinomicetos. Los contenidos de materia seca se incrementaron cuando se aplicó todo el fertilizante en la siembra o a los 45 días, mientras que los máximos rendimientos en forraje fresco, materia seca y proteína se obtuvieron con 75 y 150 kg/ha. En cuanto a las fuentes los mayores rendimientos en forraje fresco, materia seca y proteína se obtuvieron, respectivamente, con nitrato de potasio, sulfato de amonio y colácteos. Palabras clave: Avena sativa, fuentes nitrogenadas, actividad microbial, población microbial, Nariño, rendimiento. ABSTRACT Effect of nitrogen fertilization on microbial activity and forage yield in oat in an andisol of Nariño department of Colombia. The effect of three nitrogen sources potassium nitrate (13% de N y 44% de K20, ammonium sulphate (21% de N y 24% de S and colácteos (27% de N, 10 % de K20 y 6% de P2O5, at three application time (at seeding time, total at 45 days and fractional, 50% at sowing and 50% at 45 days after sowing and three doses (25, 75 and 150 kg/ha, in an Andisol of Nariño, Colombia

  16. Desarrollo de galletas con sustitución parcial de harina de trigo con harina de algarroba (Prosopis alba y avena para planes sociales

    Directory of Open Access Journals (Sweden)

    Sara Macías

    2013-12-01

    Full Text Available La diversificación de alimentos es una estrategia para abordar problemas nutricionales. Producir alimentos de consumo masivo incorporando harinas regionales sería una opción para obtener alimentos de valor nutritivo optimizado. El objetivo de este trabajo fue desarrollar galletas de calidad nutricional mejorada, para escolares, con mezclas de harinas de trigo, de algarroba y avena. Se determinó la composición proximal y Ca, Fe, Mg, P, K y Zn en harina de algarroba con metodología AOAC y disponibilidad potencial in vitro para Ca, Fe y Zn. Se evaluó la calidad proteica teórica de distintas mezclas por el método del Puntaje Químico, previa corrección por digestibilidad, utilizando como proteína de referencia los requerimientos del patrón FAO. Se diseñaron galletas con 3 mezclas porcentuales: harina de trigo:harina de algarroba 70:30 y 80:20, harina de trigo:harina de algarroba:avena 80:10:10 y un testigo con 100 % harina de trigo. Se determinaron composición proximal, contenido y disponibilidad potencial de Ca, Fe y Zn. Se midieron parámetros tecnológicos en masas y galletas (color y factor de expansión. Las galletas se evaluaron sensorialmente con 35 consumidores, usando escala hedónica de 9 puntos. El Puntaje Químico aumentó ≈ el 25 % en la mezcla 70:30, 19 % en la 80:20 y 28 % para la 80:10:10 respecto del aminoácido lisina en harina de trigo. La corrección por digestibilidad, posicionó con mejor calidad proteica a la mezcla 80:10:10. El diámetro de las galletas aumentó con la disminución del espesor. El balance entre criterios nutricionales y tecnológicos favoreció la elección de las galletas 80:20 y 80:10:10. Son fuente de fibra y minerales. En pruebas sensoriales, las galletas obtuvieron puntaje superior a 6, siendo la más aceptada la 80:10:10. Es tecnológicamente posible sustituir un 20 % de harina de trigo por los ingredientes propuestos obteniéndose galletas nutricionalmente mejoradas y aceptables para

  17. Gibberellin-like effects of KAR1 on dormancy release of Avena fatua caryopses include participation of non-enzymatic antioxidants and cell cycle activation in embryos.

    Science.gov (United States)

    Cembrowska-Lech, Danuta; Kępczyński, Jan

    2016-02-01

    The induction of dormancy release and germination of Avena fatua caryopses by KAR 1 involves ABA degradation to phaseic acid. Both, KAR 1 and GA 3 , control the AsA-GSH cycle, DNA replication and accumulation of β-tubulin in embryos before caryopses germination. Avena fatua caryopses cannot germinate in darkness at 20 °C because of dormancy, but karrikinolide-1 (KAR1), a compound in plant-derived smoke, and gibberellic acid (GA3) induced an almost complete germination. The radicle protrusion through the coleorhiza was preceded by increased water uptake, rupture of coat, increased embryo size and coleorhiza length as well as coleorhiza protrusion through covering structures. The stimulatory effect of KAR1 was correlated with the reduced content of abscisic acid (ABA) and an increase in phaseic acid (PA) in embryos from caryopses before coleorhiza protrusion. Two non-enzymatic antioxidants, ascorbate (AsA) and reduced glutathione (GSH), did not affect the germination of dormant caryopses, but in the presence of KAR1 or GA3 they only slightly delayed the germination. The stimulatory effect of KAR1 or GA3 on the final germination percentage was markedly antagonized by lycorine, an AsA biosynthesis inhibitor. KAR1 and GA3 applied during caryopses imbibition resulted in increases of AsA, dehydroascorbate (DHA) and GSH, but reduced the embryos' oxidized glutathione (GSSG) content. Furthermore, both KAR1 and GA3 induced an additional ascorbate peroxidase (APX) isoenzyme and increased the glutathione reductase (GR) activity. Both compounds stimulated β-tubulin accumulation in radicle+coleorhiza (RC) and plumule+coleoptile (PC), and enhanced the transition from G1 to S and also from S to G2 phases. The comparison of the effects produced by KAR1 and GA3  shows a similar action; thus the KAR1 effect may not be specific. The study provides new data regarding the mechanism with which KAR1, a representative of a novel class of plant growth regulators, regulates dormancy and

  18. Ecological aspects of Aphidius colemani Viereck (Hymenoptera: Aphidiidae on the Sitobion avenae (Fabricius (Hemiptera: Aphididae population in wheat culture in Medianeira, PR./ Aspectos ecológicos de Aphidius colemani Viereck (Hymenoptera: Aphidiidae sobre a população de Sitobion avenae (Fabricius (Hemiptera: Aphidiidae na cultura de trigo em Medianeira, PR

    Directory of Open Access Journals (Sweden)

    Tânia Mari Vicentini Prestes

    2006-06-01

    Full Text Available Aphids were the main winter-cereal problem in the 70’s in southern Brazil and it was necessary to use chemical control to avoid losses. Based in the weak performance of native parasites, 14 species of exotic parasites were introduced in 1978, and in 1984 the West of Paranà’s Biological Control Program was implanted. This program propitiated the reduction of the Aphid population as well as chemical applications in the field. However, no bibliographic study was found referring to the ecological aspects of the parasites nor about Aphid’s biological control in Western Paraná´s region wheat production motivating the development of this study. Week evaluations in 25 parcel of 25 m2 were performed where 100 wheat plants were collected, from which aphid and bugs were taken out. It was observed the presence of an Aphid specie, Sitobion avenae (Fabricius (Hemyptera: Aphididae, the primary parasite Aphidius colemani Viereck (Hymenoptera: Aphidiidae, and hyper parasitoids, and also the presence of predators. S. avenae population zenith occurred in the beginning of budding and bugs appeared a week after the aphids. Aphid control was considered efficient at 95% total parasitism. Population zenith of A. colemani occurred in the beginning of August, while hyper parasitoids zenith occurred the following week. Aphid population growth was significantly influenced by the air relative humidity, whereas parasite population was influenced by temperature and aphid population density.Os afídeos foram o principal problema dos cereais de inverno na década de 70, no Sul do Brasil, havendo necessidade de controle químico para evitar as perdas. Com base no fraco desempenho dos parasitóides nativos, em 1978 foram introduzidas 14 espécies de parasitóides exóticos no Brasil e em 1984, implantou-se o Programa de Controle Biológico no Oeste do Estado do Paraná, que proporcionou redução das populações de afídeos e da aplicação de produtos químicos. No

  19. Studies in Wild Oat Seed Dormancy: I. THE ROLE OF ETHYLENE IN DORMANCY BREAKAGE AND GERMINATION OF WILD OAT SEEDS (AVENA FATUA L.).

    Science.gov (United States)

    Adkins, S W; Ross, J D

    1981-02-01

    Seed of Avena fatua were shown to exhibit a characteristic loss of dormancy during dry storage at 25 C, whereas similar seed stored at 5 C maintained dormancy. 2-Chloroethylphosphonic acid was shown to increase germination of partly dormant seed imbibed under certain temperature regimes; a similar effect could not be established for fully dormant or fully nondormant seed. Using gas-liquid chromatography, natural ethylene levels were followed during imbibition of fully dormant and nondormant seed. A large peak in production was observed in the period prior to radicle emergence in the case of the nondormant seed. Measurements of ethylene production taken at 15 C, following periods of after-ripening in moist soil at either 5 or 25 C, indicated that endogenous production was unlikely to be a main cause of dormancy breakage in this species. The possibility that endogenous ethylene could play a role in natural dormancy breakage in aged seeds is discussed. The practical possibilities of 2-chloroethylphosphonic acid as a dormancy breaking agent in a field situation are outlined.

  20. Physiological and nutritional status of black oat (Avena strigosa Schreb.) grown in soil with interaction of high doses of copper and zinc.

    Science.gov (United States)

    Tiecher, Tadeu L; Tiecher, Tales; Ceretta, Carlos A; Ferreira, Paulo A A; Nicoloso, Fernando T; Soriani, Hilda H; Tassinari, Adriele; Paranhos, Juçara Terezinha; De Conti, Lessandro; Brunetto, Gustavo

    2016-09-01

    Vineyard sandy acid soils from South Brazil have experienced heavy metal contamination due to replacement of copper (Cu)-based by zinc (Zn)-based products to control foliar diseases. Thus, we evaluate physiological and nutritional status of black oat (Avena strigosa Schreb.), a common interrow crop in vineyards from this region. Soil was collected in a natural field from Santana do Livramento, in Rio Grande do Sul, the southernmost state of Brazil. Black oat was cultivated for 30 days in a greenhouse with application of 0, 30, and 60 mg Cu kg(-1) combined with 0, 15, 30, 60, 120, and 180 mg Zn kg(-1). After the trial period, dry matter accumulation of roots and shoots, Cu and Zn contents in roots and shoots, chlorophyll a fluorescence, photosynthetic pigments and catalase (CAT, EC 1.11.1.6) and peroxidase (POD, EC 1.11.1.7) activity were determined. Cu and Zn toxicity was evidenced by the decrease in plant growth of black oat as well as by the decrease of photochemical efficiency associated with the decrease in photosynthetic pigment content, especially with the highest doses of Cu and Zn. Furthermore, the activity of antioxidant enzymes (CAT and POD) was increased in intermediate doses of Zn, indicating the activation of the antioxidant system, but the stress condition in treatments with high levels of Cu and Zn was not reversed. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  1. Cereales menores de invierno : Mejoramiento genético de avena, cebada cervecera, centeno y cebada forrajera: producción y utilización en la Argentina

    OpenAIRE

    Tomaso, Juan Carlos

    2008-01-01

    Se conoce como cereales menores de invierno a una serie de cultivos como los de avena, centeno, cebada cervecera, cebada forrajera, triticale y trigo candeal. Estos cultivos en forma separada tienen una relevancia económica menor que el trigo pero, en conjunto, resultan importantes tanto por la superficie cultivada como por su valor económico. En esta charla yo me voy a referir a aquellos cereales de invierno en los que yo he trabajado durante todos estos años que llevo en...

  2. Herbicide resistance-endowing ACCase gene mutations in hexaploid wild oat (Avena fatua): insights into resistance evolution in a hexaploid species

    Science.gov (United States)

    Yu, Q; Ahmad-Hamdani, M S; Han, H; Christoffers, M J; Powles, S B

    2013-01-01

    Many herbicide-resistant weed species are polyploids, but far too little about the evolution of resistance mutations in polyploids is understood. Hexaploid wild oat (Avena fatua) is a global crop weed and many populations have evolved herbicide resistance. We studied plastidic acetyl-coenzyme A carboxylase (ACCase)-inhibiting herbicide resistance in hexaploid wild oat and revealed that resistant individuals can express one, two or three different plastidic ACCase gene resistance mutations (Ile-1781-Leu, Asp-2078-Gly and Cys-2088-Arg). Using ACCase resistance mutations as molecular markers, combined with genetic, molecular and biochemical approaches, we found in individual resistant wild-oat plants that (1) up to three unlinked ACCase gene loci assort independently following Mendelian laws for disomic inheritance, (2) all three of these homoeologous ACCase genes were transcribed, with each able to carry its own mutation and (3) in a hexaploid background, each individual ACCase resistance mutation confers relatively low-level herbicide resistance, in contrast to high-level resistance conferred by the same mutations in unrelated diploid weed species of the Poaceae (grass) family. Low resistance conferred by individual ACCase resistance mutations is likely due to a dilution effect by susceptible ACCase expressed by homoeologs in hexaploid wild oat and/or differential expression of homoeologous ACCase gene copies. Thus, polyploidy in hexaploid wild oat may slow resistance evolution. Evidence of coexisting non-target-site resistance mechanisms among wild-oat populations was also revealed. In all, these results demonstrate that herbicide resistance and its evolution can be more complex in hexaploid wild oat than in unrelated diploid grass weeds. Our data provide a starting point for the daunting task of understanding resistance evolution in polyploids. PMID:23047200

  3. Reference gene selection for molecular studies of dormancy in wild oat (Avena fatua L.) caryopses by RT-qPCR method.

    Science.gov (United States)

    Ruduś, Izabela; Kępczyński, Jan

    2018-01-01

    Molecular studies of primary and secondary dormancy in Avena fatua L., a serious weed of cereal and other crops, are intended to reveal the species-specific details of underlying molecular mechanisms which in turn may be useable in weed management. Among others, quantitative real-time PCR (RT-qPCR) data of comparative gene expression analysis may give some insight into the involvement of particular wild oat genes in dormancy release, maintenance or induction by unfavorable conditions. To assure obtaining biologically significant results using this method, the expression stability of selected candidate reference genes in different data subsets was evaluated using four statistical algorithms i.e. geNorm, NormFinder, Best Keeper and ΔCt method. Although some discrepancies in their ranking outputs were noticed, evidently two ubiquitin-conjugating enzyme homologs, AfUBC1 and AfUBC2, as well as one homolog of glyceraldehyde 3-phosphate dehydrogenase AfGAPDH1 and TATA-binding protein AfTBP2 appeared as more stably expressed than AfEF1a (translation elongation factor 1α), AfGAPDH2 or the least stable α-tubulin homolog AfTUA1 in caryopses and seedlings of A. fatua. Gene expression analysis of a dormancy-related wild oat transcription factor VIVIPAROUS1 (AfVP1) allowed for a validation of candidate reference genes performance. Based on the obtained results it can be recommended that the normalization factor calculated as a geometric mean of Cq values of AfUBC1, AfUBC2 and AfGAPDH1 would be optimal for RT-qPCR results normalization in the experiments comprising A. fatua caryopses of different dormancy status.

  4. Study on screening and antagonistic mechanisms of Bacillus amyloliquefaciens 54 against bacterial fruit blotch (BFB) caused by Acidovorax avenae subsp. citrulli.

    Science.gov (United States)

    Jiang, Chun-Hao; Wu, Fang; Yu, Zhen-Yun; Xie, Ping; Ke, Hong-Jiao; Li, Hong-Wei; Yu, Yi-Yang; Guo, Jian-Hua

    2015-01-01

    Bacterial fruit blotch (BFB) was a serious threat to cucurbitaceae crops. It was caused by the gram-negative bacterium Acidovorax avenae subsp. citrulli. Two hundred strains, which have the potential in controlling plant diseases in our laboratory's biocontrol strain library, were employed to this research to screen some antagonistic bacteria, which can efficiently control bacterial fruit blotch disease. Based on the results of antagonistic activity experiments, greenhouse tests and field trials, 5 of the test strains have high abilities to control BFB. One of the 5 bacteria strains has the highest potential to control BFB named 54. The biocontrol efficacy of 54 was up to 60%. To characterize the strain, we used series of methods to evaluate the bacterium, including morphology analysis, physiological biochemical test and biomolecular assay. We found that the bacterium 54 belongs to the species Bacillus amyloliquefaciens. The colonization test results showed that 54 had the highest colonization levels, and the density of the strain on leaves was up 10(5)colony forming units (CFU) per gram of leaf tissue. Our recent results show that B. amyloliquefaciens 54 can promote the plant growth due to raised the contents of available N, P, K and the leaf chlorophyll. The antagonistic bacterium 54 can significantly control the BF B by increasing the expression level of defense-related gene PR1 and the accumulation the hydrogen peroxide in the plant. The results of trail experiment was also verified this efficient results of bacterium. This is also the first report of B. amyloliquefaciens strain that is able to control BFB. Copyright © 2014 Elsevier GmbH. All rights reserved.

  5. Herbicide resistance-endowing ACCase gene mutations in hexaploid wild oat (Avena fatua): insights into resistance evolution in a hexaploid species.

    Science.gov (United States)

    Yu, Q; Ahmad-Hamdani, M S; Han, H; Christoffers, M J; Powles, S B

    2013-03-01

    Many herbicide-resistant weed species are polyploids, but far too little about the evolution of resistance mutations in polyploids is understood. Hexaploid wild oat (Avena fatua) is a global crop weed and many populations have evolved herbicide resistance. We studied plastidic acetyl-coenzyme A carboxylase (ACCase)-inhibiting herbicide resistance in hexaploid wild oat and revealed that resistant individuals can express one, two or three different plastidic ACCase gene resistance mutations (Ile-1781-Leu, Asp-2078-Gly and Cys-2088-Arg). Using ACCase resistance mutations as molecular markers, combined with genetic, molecular and biochemical approaches, we found in individual resistant wild-oat plants that (1) up to three unlinked ACCase gene loci assort independently following Mendelian laws for disomic inheritance, (2) all three of these homoeologous ACCase genes were transcribed, with each able to carry its own mutation and (3) in a hexaploid background, each individual ACCase resistance mutation confers relatively low-level herbicide resistance, in contrast to high-level resistance conferred by the same mutations in unrelated diploid weed species of the Poaceae (grass) family. Low resistance conferred by individual ACCase resistance mutations is likely due to a dilution effect by susceptible ACCase expressed by homoeologs in hexaploid wild oat and/or differential expression of homoeologous ACCase gene copies. Thus, polyploidy in hexaploid wild oat may slow resistance evolution. Evidence of coexisting non-target-site resistance mechanisms among wild-oat populations was also revealed. In all, these results demonstrate that herbicide resistance and its evolution can be more complex in hexaploid wild oat than in unrelated diploid grass weeds. Our data provide a starting point for the daunting task of understanding resistance evolution in polyploids.

  6. Reference gene selection for molecular studies of dormancy in wild oat (Avena fatua L.) caryopses by RT-qPCR method

    Science.gov (United States)

    Kępczyński, Jan

    2018-01-01

    Molecular studies of primary and secondary dormancy in Avena fatua L., a serious weed of cereal and other crops, are intended to reveal the species-specific details of underlying molecular mechanisms which in turn may be useable in weed management. Among others, quantitative real-time PCR (RT-qPCR) data of comparative gene expression analysis may give some insight into the involvement of particular wild oat genes in dormancy release, maintenance or induction by unfavorable conditions. To assure obtaining biologically significant results using this method, the expression stability of selected candidate reference genes in different data subsets was evaluated using four statistical algorithms i.e. geNorm, NormFinder, Best Keeper and ΔCt method. Although some discrepancies in their ranking outputs were noticed, evidently two ubiquitin-conjugating enzyme homologs, AfUBC1 and AfUBC2, as well as one homolog of glyceraldehyde 3-phosphate dehydrogenase AfGAPDH1 and TATA-binding protein AfTBP2 appeared as more stably expressed than AfEF1a (translation elongation factor 1α), AfGAPDH2 or the least stable α-tubulin homolog AfTUA1 in caryopses and seedlings of A. fatua. Gene expression analysis of a dormancy-related wild oat transcription factor VIVIPAROUS1 (AfVP1) allowed for a validation of candidate reference genes performance. Based on the obtained results it can be recommended that the normalization factor calculated as a geometric mean of Cq values of AfUBC1, AfUBC2 and AfGAPDH1 would be optimal for RT-qPCR results normalization in the experiments comprising A. fatua caryopses of different dormancy status. PMID:29390041

  7. Producción y calidad de forraje de variedades de avena en condiciones de temporal en Zacatecas, México

    Directory of Open Access Journals (Sweden)

    Ricardo A. Sánchez Gutiérrez

    2014-01-01

    Full Text Available Se evaluó la pro ducción, calidad y componentes de rendimiento de seis variedades de avena forrajera en Zacatecas. Los experimentos se establecieron en julio de 2011 y 2012 en el municipio de Monte Escobedo. El dise ño experimental fue bloques completos al azar con tres repeticiones, la densidad de siembra fue 120 kg ha -1 y dosis de fertilización de 60-40-00 de N, P 2 O 5 , K. La cosecha fue en estado fisiológico lechoso-masoso. En 2011 y 2012, La variedad Saía sobresalió ( P 0.05 entre variedades con un rango de 10.6 a 13.8 %. En los dos años de estudio Karma presentó las mejores características nutricionales: baja acumulación de fibra detergente neutr o (51 % y acida (33.4 y 35.3 %, valores altos en total de nutrientes digestibles (54 y 58 %, digestibilidad de la materia seca (60 y 62 %, valor relativo del forraje (110 y 113 y energía neta para lactación (1.4 y 1.34 Mcal/kg; P <0.05. Las variables asociadas de manera positiva con forraje seco fueron altura de planta (r=0.701, días a co secha (r=0.685 y proporción de tallo (r=0.629, y negativamente con proporción de espiga (r=-0.629. En calidad nut ricional Karma tuvo mejor valor forrajero. Saia es una buena alternativa para incrementar el rendimiento de forraje por hectárea.

  8. Produtividade de grãos e componentes do rendimento da aveia preta (Avena strigosa Schreb. afetados pela densidade e velocidade de semeadura Grain yield and yield components of black oat (Avena strigosa Schreb. as affected by seeding rate and velocity

    Directory of Open Access Journals (Sweden)

    Henrique Debiasi

    2007-06-01

    Full Text Available Com o objetivo de avaliar a influência da densidade (30, 60 e 90kg ha-1 de sementes viáveis e da velocidade (3,2; 5,3; 6,9 e 8,2km h-1 de semeadura na produtividade de grãos e componentes do rendimento de aveia preta (Avena strigosa Schreb., na região de São Gabriel/RS, sob condições de pastejo intenso, executou-se um experimento em blocos ao acaso e três repetições. Observou-se um menor número de panículas por m² para as densidades de 30 e 60kg ha-1, o que foi compensado pelo maior número de cariopses por panícula, de forma que as produtividades de grãos mais elevadas foram obtidas nestas densidades. As densidades não afetaram significativamente a massa de 1000 cariopses. O número de plantas por m², a produtividade de grãos e os componentes do rendimento (à exceção do número de cariopses por panícula não foram influenciados pelas velocidades de semeadura.A field experiment in randomized blocks with three replications was carried out in São Gabriel, Brazil, to evaluate seeding rate (30, 60 e 90kg ha-1 of viable seeds and velocity (3.2; 5.3; 6.9 e 8.2km h-1 effect on grain yield and yield components of black oat (Avena strigosa Schreb., under intensive cattle grazing. A minor number of panicles per m² was observed for seeding rates of 30 and 60kg ha-1, witch was compensated for the major number of cariopsis per panicle, so that higher grain yields were obtained for these seeding rates. Seeding rates did not affect significantly the 1000 cariopsis weight. Number of plants per m², grain yield and yield components (exception for number of caripsis per panicle were not influenced by seeding velocity.

  9. Producción de biomasa aérea y uso equivalente de la tierra en intercultivos de alfalfa (Medicago sativa L.

    Directory of Open Access Journals (Sweden)

    T. W Pereyra

    Full Text Available Tradicionalmente, el incremento de la productividad se ha asociado al aumento del rendimiento a través del mejoramiento genético y las prácticas de manejo del cultivo. Sin embargo, si se considera la producción por unidad de área y de tiempo, el sistema de intercultivos puede ser otra forma de mejorar la rentabilidad. El objetivo del experimento fue determinar la biomasa producida y el uso equivalente de la tierra en monocultivo e intercultivos de alfalfa (Medicago sativa L. con sorgo sudán (Sorghum sudanense L. y avena (Avena sativa L.. Se determinó la biomasa aérea de todos los tratamientos (expresada por unidad de superficie y el uso equivalente de la tierra. El diseño fue completamente aleatorizado, dispuesto en bloques con dos repeticiones. Los resultados se sometieron a un ANOVA y las medias se compararon mediante la prueba de Duncan, a través del paquete estadístico INFOSTAT. El intercultivo alfalfa-sorgo triplicó la producción de alfalfa en relación con el monocultivo, mientras que alfalfa-avena no superó la producción de alfalfa pura en los meses de invierno. El intercultivo alfalfa-sorgo fue un 57 % más eficiente en el uso de la tierra que sus respectivos monocultivos, mientras que alfalfa-avena no logró superar la unidad.

  10. Crescimento de Acidovorax avenae subsp. citrulli sob diferentes temperaturas, pH, concentrações de cloreto de sódio e fontes de carbono Growth of Acidovorax avenae subsp. citrulli under different variable temperature, pH, sodium chloride concentrations and carbon sources

    Directory of Open Access Journals (Sweden)

    Márcia Tanajura Cavalcanti

    2005-12-01

    Full Text Available O objetivo deste estudo foi determinar o efeito da temperatura (0 a 45°C, pH (4 a 10 e concentração de NaCl (1 a 10% sobre o crescimento de Acidovorax avenae subsp. citrulli (Aac. Quatro estirpes de Aac foram cultivadas em meio de cultura líquido específico e o crescimento avaliado pela absorbância (580nm. Os dados obtidos foram submetidos à análise de regressão não linear. O crescimento das estirpes também foi avaliado em caldo base para fermentação contendo 1% dos carboidratos glicose, galactose, ramnose, sacarose, lactose, maltose, amido, inulina, manitol, dulcitol, sorbitol e salicina, indicada pela mudança da cor do meio. Com base nas análises de regressão, as temperaturas mínima, ótima e máxima para crescimento de Aac foram, respectivamente, 1, 32 e 41°C; o pH ótimo para crescimento dessa bactéria foi 7,4 com os extremos mínimo de 4,0 e máximo de 10,8 e; o crescimento de Aac decresceu com o aumento da concentração de NaCl, sendo o nível de 6,2% letal. Todos os carboidratos testados foram utilizados pelas estirpes de Aac como fonte de carbono, com pequena variação de crescimento observada pela velocidade e intensidade da utilização do substrato com produção de ácido.The objective of this study was to determine the effect of temperature (0 to 45°C, pH (4 to 10 and NaCl concentration (1 to 10% in the growth of Acidovorax avenae subsp. citrulli (Aac. Four Aac strains were grown in specific liquid medium, and their growth evaluated by absorbance (580nm. Data were submitted to nonlinear regression analysis. The bacterial growth was also studied in fermentation broth containing 1% of fermentable carbohydrates, glucose, galactose, rhamnose, sucrose, lactose, maltose, starch, inulin, mannitol, dulcitol, sorbitol and salicin, being evaluated by medium color change. Based upon regression analyses, the minimum, optimum and maximum temperatures for Aac growth were respectively 1, 32 and 41°C; the optimum pH for Aac

  11. Fungicidas, doses e volumes de calda no controle químico da ferrugem da folha da aveia (Puccinia coronata f. sp. avenae Fungicides, rates and spray volumes in the chemical control of oats crown rust (Puccinia coronata f. sp. avenae

    Directory of Open Access Journals (Sweden)

    Ana R. de Oliveira

    2007-01-01

    Full Text Available A ferrugem da folha (Puccinia coronata f. sp. avenae é a doença mais destrutiva da aveia, e aplicações de fungicidas com volumes baixos de calda podem reduzir a eficácia do controle químico. O objetivo do trabalho foi avaliar a eficiência técnica e econômica de fungicidas, doses e volumes de calda no controle da ferrugem da folha da aveia. O experimento foi conduzido no ano de 2003, na área experimental da FAMV/UPF, com a cultivar de aveia UPFA-20. Os tratamentos foram compostos pelas combinações entre dois fungicidas (tebuconazole, Folicur, 0,75 L ha-1 e epoxiconazole + piraclostrobim, Opera, 0,5 L ha-1, quatro doses (40; 60; 80 e 100% da dose recomendada e dois volumes de calda (100 e 200 L ha-1. O delineamento experimental foi o de blocos casualizados, com esquema fatorial (2x4x2 e quatro repetições. Avaliaram-se a severidade, o controle da ferrugem, a massa do hectolitro, a massa de mil grãos e o rendimento de grãos, realizando-se análise econômica. O volume de calda de 200 L ha-1 proporcionou maiores níveis de controle da doença. As aplicações dos fungicidas com volume de 200 L ha-1 e meia dose ou com 100 L ha-1 e dose cheia proporcionam níveis de controle da ferrugem equivalentes. O resultado econômico difere entre fungicidas e independe do volume de calda. Os efeitos de doses dependem do fungicida.Crown rust (Puccinia coronata f. sp. avenae is the most important disease of oats in Brazil. In susceptible oat cultivars, fungicides are needed to control the disease efficiently. However, spray at low volumes may reduce fungicide performance significantly. A field experiment with the oat cultivar UPFA-20 was carried out at the FAMV/UPF to evaluate the influence of fungicides, rates, and spray volumes on the efficacy of the chemical control for crown rust. The tested treatments combined two fungicides (tebuconazole, Folicur, 0,75 L ha-1; epoxiconazole + pyraclostrobin, Opera, 0,5 L ha-1, four rates (40; 60; 80 and 100

  12. Controle genético da resistência parcial à ferrugem da folha em aveia (Avena sativa L. Genetic control of partial resistance of crown rust in oat (Avena sativa L.

    Directory of Open Access Journals (Sweden)

    Marta Martins Barbosa-Prestes

    2008-04-01

    Full Text Available Os objetivos deste trabalho foram descrever a variabilidade para resistência parcial à ferrugem da folha em populações segregantes, bem como estudar o controle genético envolvido na expressão da resistência. As avaliações de severidade da doença foram realizadas em 1998, 1999 e 2000, seguindo a escala modificada de Cobb. Os resultados de três anos de estudo evidenciaram que, apesar da grande influência do ambiente na expressão da resistência, as populações segregantes apresentaram grande variabilidade para resistência parcial. A distribuição de freqüências da Área Sob a Curva do Progresso da Doença (ASCPD em gerações avançadas foi contínua para o caráter, indicando a presença de vários genes de pequeno efeito em seu controle. As estimativas de herdabilidade variaram de moderadas a altas.The objectives of this research were to describe the variability regarding partial resistance to leaf rust in segregating populations and to study genetic control of the resistance expression. The evaluation of disease was done at 1998, 1999 and 2000, according to modified Cobb’s scale. The results of three years studies showed that regardless the great environmental effect on the expression of resistance, the segregating population presented great variability for partial resistance. The frequency distribution of AUDPC for advanced generations, was continuous for this trait, indicating the presence of several genes of small effects controlling the disease. The estimatives of herdability varied from moderate to high.

  13. Increasing Antioxidant Activity and Protein Digestibility in Phaseolus vulgaris and Avena sativa by Fermentation with the Pleurotus ostreatus Fungus

    Directory of Open Access Journals (Sweden)

    Edith Espinosa-Páez

    2017-12-01

    Full Text Available The aim of the research was to determine the impact of fermentation with Pleurotus ostreatus on kidney beans, black beans, and oats. The results indicate that the fungus has a positive effect on the substrates when compared to the controls. The antioxidant activity (39.5% on kidney beans and 225% on oats in relation to the controls and content of total polyphenols (kidney beans three times higher regarding the controls increased significantly by the presence of the fungus mycelium, even after simulated digestion. There was a significant increase in protein digestibility (from 39.99 to 48.13% in black beans, 44.06 to 69.01% in kidney beans, and 63.25 to 70.01% in oats and a decrease of antinutrient tannins (from 65.21 to 22.07 mg in black beans, 35.54 to 23.37 in kidney beans, and 55.67 to 28.11 in oats as well as an increase in the contents of some essential amino acids. Overall, this fermentation treatment with Pleurotus ostreatus improved the nutritional quality of cereals and legumes, making them potential ingredients for the elaboration and/or fortification of foods for human nutrition.

  14. Protein evaluation of four oat (Avena sativa L.) cultivars adapted for cultivation in the south of Brazil.

    Science.gov (United States)

    Pedó, I; Sgarbieri, V C; Gutkoski, L C

    1999-01-01

    Four oat cultivars adapted for soil and climate conditions in the southern region of Brazil were evaluated for protein nutritive value. Evaluations were done both in vitro and in vivo. In vitro evaluation was done by essential amino acid profile, available lysine, amino acid scoring, and protein digestibility corrected amino acid-scoring (PDCAAS). Nitrogen balance indices and PER were determined in vivo with rats. In all four cultivars (UFP-15, UFP-16, CTC-03, UFRGS-14), lysine was the most limiting amino acid. Available lysine, amino acid score and PDCAAS were highest for cultivar UFRGS-14 and lowest for CTC-03. When compared to casein, only nitrogen retention for UFRGS-14 did not differ statistically (p>0.05); all other indices of protein quality were inferior to casein for the oat cultivars. The oat cultivars tended to be identical among themselves, except for apparent protein digestibility which was significantly higher in the UFRGS-14 and CTC-03 cultivars. On average, the PER values of the oat cultivars were 82% of casein; the net protein utilization was 88% of casein as determined in vivo and 49% by the estimation in vitro (PDCAAS).

  15. Structural characterization and evaluation of antioxidant, anticancer and hypoglycemic activity of radiation degraded oat (Avena sativa) β- glucan

    Science.gov (United States)

    Hussain, Peerzada R.; Rather, Sarver A.; Suradkar, Prashant P.

    2018-03-01

    Oat β-D-glucan after extraction was degraded at doses of 3, 6, 9, 12 and 15 kGy. The average molecular weight decreased to 45 kDa at dose of 15 kGy from an initial value of 200 kDa in native sample. XRD analysis revealed no significant change in diffraction pattern of irradiated samples when compared with control, except a decrease in intensity of x-ray diffraction. The results of the antioxidant activity revealed decrease in EC50 values and corresponding increase in antioxidant activity of radiation degraded oat β-D-glucan. Results of the anticancer studies indicated that cytotoxicity of gamma irradiated oat β-D-glucan in cancer cell lines was highest against colo-205 and MCF7 cancer cells compared to T47D cell and no cytotoxicity was observed in normal cell lines at all concentrations used. Evaluation of hypoglycemic activity showed highest inhibition in α-glucosidase activity compared to α-amylase activity due to gamma irradiation of oat β-D-glucan. Comparison of the EC50 values of known standards and gamma irradiated oat beta-glucan samples indicates that radiation treatment significantly modified the biological activity of the beta-glucan samples. Therefore, it is suggested that gamma irradiation can be used for producing low molecular weight oat β-D-glucan; which can help in modifying the biological activities.

  16. Evaluation of post-germinative lipid peroxidation and enzymatic antioxidant potential in lead absorbing oat (Avena sativa) seedlings.

    Science.gov (United States)

    Bhushan, Bharat; Pal, Ajay; Kumar, Satish; Rajesh; Singh, Archana

    2015-01-01

    The objective of the present research was to study the impact of lead (Pb) on growth, metal uptake and antioxidative potential of oat seeds under metal stress. To achieve these objectives, few experiments were conducted to assess the effect of this particular metal on various anti-oxidative enzymes, during initial metabolism after germination, in presence of lead. Pb is not an oxido-reducing metal, the oxidative stress induced by Pb in growing oat seedlings appears to be an indirect effect of Pb toxicity, leading to production of ROS with simultaneous decrease in tissue levels of superoxide dismutase and catalase. Content of free radical like superoxide anion and metabolite such as H2O2 were found to be more in plumule as compared to radical and endosperm of oat seedling. In response to various concentrations of lead ranging from 25-400 ppm, activities of peroxidase, glutathione peroxidase and ascorbate peroxidase were induced in plumule, radical and cotyledon on the 3rd, 6th and 9th days after germination. Growth parameters like length, fresh weight and dry weight were substantially affected in addition to reduced germination upto 49% only. The results indicated that even at the lowest concentration tested, a low inhibition of growth was obtained.

  17. Field application of benzothiadiazole (BTH) to oats (Avena sativa): Effects on crown rust resistance and avenanthramide production

    Science.gov (United States)

    Plant defense activators such as benzothiadiazole (BTH) are known to elicit the biosynthesis of plant phytoalexins. In oat, BTH treatment was shown to up-regulate avenanthramide production in both the vegetative tissue and filling grain in greenhouse studies. Avenanthramides are phenolic antioxidant...

  18. Use of High-Resolution Multispectral Imagery to Estimate Soil and Plant Nitrogen in Oats (Avena sativa)

    Science.gov (United States)

    ELarab, M.; Ticlavilca, A. M.; Torres-Rua, A. F.; McKee, M.

    2014-12-01

    Precision agriculture requires high spatial resolution in the application of the inputs to agricultural production. This requires that actionable information about crop and field status be acquired at the same high spatial resolution and at a temporal frequency appropriate for timely responses. In this study, high-resolution imagery was obtained through the use of a small, unmanned aerial vehicle, called AggieAirTM, which provides spatial resolution as fine as 15 cm. Simultaneously with AggieAir flights, intensive ground sampling was conducted at precisely determined locations for plant and soil nitrogen among other parameters. This study investigated the spectral signature of oats and formulated a machine learning regression model of reflectance response between the multi-spectral bands available from AggieAir (red, green, blue, near infrared, and thermal), plant nitrogen and soil nitrogen. A multivariate relevance vector machine (MVRVM) was used to develop the linkages between the remotely sensed data and plant and soil nitrogen at approximately 15-cm resolution. The results of this study are presented, including a statistical evaluation of the performance of the model.

  19. Ozone deposition to an oat crop ( Avena sativa L.) grown in open-top chambers and in the ambient air

    Science.gov (United States)

    Pleijel, H.; Wallin, G.; Karlsson, P. E.; Skarby, L.; Sellden, G.

    Fluxes and deposition velocities for ozone were determined for open-top chambers with and without an oat crop, and for the adjacent field, using a resistance analogue model and the aerodynamic wind-profile method, respectively. During a period when the canopy was green and the ambient wind speeds modest, the fluxes and deposition velocities were higher in the chamber with plants than in the field crop. The deposition to chamber walls and soil in the chamber only accounted for part of that difference. The deposition velocity for ozone to the crop was light-dependent both in the chamber with plants and in the ambient air. With increasing plant senescence, the deposition velocity declined and the light dependence disappeared. Fluctuations in deposition velocity superimposed on the overall declining trend followed the same temporal pattern in the chambers with and without plants. These fluctuations in deposition velocity may partly be explained by variations in surface wetness. Differences in boundary layer conductance between chamber and ambient, which under certain conditions may significantly influence the validity of the chamber as a test system, were observed.

  20. Linkage mapping and identification of QTL affecting deoxynivalenol (DON) content (Fusarium resistance) in oats (Avena sativa L.).

    Science.gov (United States)

    He, Xinyao; Skinnes, Helge; Oliver, Rebekah E; Jackson, Eric W; Bjørnstad, Asmund

    2013-10-01

    Mycotoxins caused by Fusarium spp. is a major concern on food and feed safety in oats, although Fusarium head blight (FHB) is often less apparent than in other small grain cereals. Breeding resistant cultivars is an economic and environment-friendly way to reduce toxin content, either by the identification of resistance QTL or phenotypic evaluation. Both are little explored in oats. A recombinant-inbred line population, Hurdal × Z595-7 (HZ595, with 184 lines), was used for QTL mapping and was phenotyped for 3 years. Spawn inoculation was applied and deoxynivalenol (DON) content, FHB severity, days to heading and maturity (DH and DM), and plant height (PH) were measured. The population was genotyped with DArTs, AFLPs, SSRs and selected SNPs, and a linkage map of 1,132 cM was constructed, covering all 21 oat chromosomes. A QTL for DON on chromosome 17A/7C, tentatively designated as Qdon.umb-17A/7C, was detected in all experiments using composite interval mapping, with phenotypic effects of 12.2–26.6 %. In addition, QTL for DON were also found on chromosomes 5C, 9D, 13A, 14D and unknown_3, while a QTL for FHB was found on 11A. Several of the DON/FHB QTL coincided with those for DH, DM and/or PH. A half-sib population of HZ595, Hurdal × Z615-4 (HZ615, with 91 lines), was phenotyped in 2011 for validation of QTL found in HZ595, and Qdon.umb-17A/7C was again localized with a phenotypic effect of 12.4 %. Three SNPs closely linked to Qdon.umb-17A/7C were identified in both populations, and one each for QTL on 5C, 11A and 13A were identified in HZ595. These SNPs, together with those yet to be identified, could be useful in marker-assisted selection to pyramiding resistance QTL.

  1. Mobilization of lipid reserves during germination of oat (Avena sativa L.), a cereal rich in endosperm oil.

    Science.gov (United States)

    Leonova, Svetlana; Grimberg, Asa; Marttila, Salla; Stymne, Sten; Carlsson, Anders S

    2010-06-01

    Since the cereal endosperm is a dead tissue in the mature grain, beta-oxidation is not possible there. This raises the question about the use of the endosperm oil in cereal grains during germination. In this study, mobilization of lipids in different tissues of germinating oat grains was analysed using thin-layer and gas chromatography. The data imply that the oat endosperm oil [triacylglycerol (TAG)] is not a dead-end product as it was absorbed by the scutellum, either as free fatty acids (FFAs) released from TAG or as intact TAG immediately degraded to FFAs. These data were supported by light and transmission electron microscopy (LM and TEM) studies where close contact between endosperm lipid droplets and the scutellum was observed. The appearance of the fused oil in the oat endosperm changed into oil droplets during germination in areas close to the aleurone and the scutellar epithelium. However, according to the data obtained by TEM these oil droplets are unlikely to be oil bodies surrounded by oleosins. Accumulation of FFA pools in the embryo suggested further transport of FFAs from the scutellum. Noticeably high levels of TAG were also accumulated in the embryo but were not synthesized by re-esterification from imported FFAs. Comparison between two oat cultivars with different amounts of oil and starch in the endosperm suggests that an increased oil to starch ratio in oat grains does not significantly impact the germination process.

  2. Molecular cloning of the apoptosis-related calcium-binding protein AsALG-2 in Avena sativa.

    Science.gov (United States)

    Hoat, Trinh Xuan; Nakayashiki, Hitoshi; Yang, Qian; Tosa, Yukio; Mayama, Shigeyuki

    2013-04-01

    Victorin, the host-selective toxin produced by the fungus Cochliobolus victoriae, induces programmed cell death (PCD) in victorin-sensitive oat lines with characteristic features of animal apoptosis, such as mitochondrial permeability transition, chromatin condensation, nuclear DNA laddering and rRNA/mRNA degradation. In this study, we characterized a calcium-binding protein, namely AsALG-2, which might have a role in the victorin-induced PCD. AsALG-2 is homologous to the Apoptosis-Linked Gene ALG-2 identified in mammalian cells. Northern blot analysis revealed that the accumulation of AsALG-2 transcripts increased during victorin-induced PCD, but not during necrotic cell death. Salicylic acid, chitosan and chitin strongly activated the expression of general defence response genes, such as PR-10; however, neither induced cell death nor the accumulation of AsALG-2 mRNA. Pharmacological studies indicated that victorin-induced DNA laddering and AsALG-2 expression were regulated through similar pathways. The calcium channel blocker, nifedipine, moderately inhibited the accumulation of AsALG-2 mRNA during cell death. Trifluoperazine (calmodulin antagonist) and K252a (serine-threonine kinase inhibitor) reduced the victorin-induced phytoalexin accumulation, but did not prevent the victorin-induced DNA laddering or accumulation of AsALG-2 mRNA. Taken together, our investigations suggest that there is a calcium-mediated signalling pathway in animal and plant PCD in common. © 2012 THE AUTHORS. MOLECULAR PLANT PATHOLOGY © 2012 BSPP AND BLACKWELL PUBLISHING LTD.

  3. Quantification of betaglucans, lipid and protein contents in whole oat groats (Avena sativa L.) using near infrared reflectance spectroscopy

    Science.gov (United States)

    Whole oat has been described as an important healthy food for humans due to its beneficial nutritional components. Near infrared reflectance spectroscopy (NIRS) is a powerful, fast, accurate and non-destructive analytical tool that can be substituted for some traditional chemical analysis. A total o...

  4. Molecular characterization and genetic diversity analysis β-glucan content variability in grain of oat (Avena sativa L.

    Directory of Open Access Journals (Sweden)

    Đukić Nevena H.

    2014-01-01

    Full Text Available In grain of ten genetically divergent oat cultivars (Merkur, Minor Abed, Flaming-Kurz, Nuptiele, Prode, Pellerva, Emperor, Astor, Osmo, Simo the variability β-glucan content were investigated. The different value of content of β-glucan was found. Among analyzed oat cultivars, the highest β- glucan contents had Pellerva (6.597%, while the least had Simo (2.971%. The contents of β-glucans were determined by ICC standard Method No 168. The value of β-glucans varied and indicated the differences and similarities between analysed cultivars. The degree of cultivar similarity was determined by dendrogram on which was discriminated two clusters of similar cultivars toward to contents of β-glucan . Within cluster 1, a small group of oats, are five cultivars with small distance (Merkur, Minor Abed, Flamings-Kurz, Nuptiele and Prode. The highest similarity in the range of 88 or the least distance in the range of 12. Within cluster 2 was four oat cultivars (Emperor, Astor, Osmo, Pellerva in which the least differences was between Emperor and Astor with average distance in range 27. Cluster 1 and cluster 2 differed with an average distance of 63. The cultivar Simo expressed the greatest distance to all analysed oat cultivars grouped in two clusters. [Projekat Ministarstva nauke Republike Srbije, br. TR 31092

  5. Digital Image Sensor-Based Assessment of the Status of Oat (Avena sativa L. Crops after Frost Damage

    Directory of Open Access Journals (Sweden)

    Isidro Villegas-Romero

    2011-06-01

    Full Text Available The aim of this paper is to classify the land covered with oat crops, and the quantification of frost damage on oats, while plants are still in the flowering stage. The images are taken by a digital colour camera CCD-based sensor. Unsupervised classification methods are applied because the plants present different spectral signatures, depending on two main factors: illumination and the affected state. The colour space used in this application is CIELab, based on the decomposition of the colour in three channels, because it is the closest to human colour perception. The histogram of each channel is successively split into regions by thresholding. The best threshold to be applied is automatically obtained as a combination of three thresholding strategies: (a Otsu’s method, (b Isodata algorithm, and (c Fuzzy thresholding. The fusion of these automatic thresholding techniques and the design of the classification strategy are some of the main findings of the paper, which allows an estimation of the damages and a prediction of the oat production.

  6. Digital Image Sensor-Based Assessment of the Status of Oat (Avena sativa L.) Crops after Frost Damage

    OpenAIRE

    Isidro Villegas-Romero; Matilde Santos; Antonia Macedo-Cruz; Gonzalo Pajares

    2011-01-01

    The aim of this paper is to classify the land covered with oat crops, and the quantification of frost damage on oats, while plants are still in the flowering stage. The images are taken by a digital colour camera CCD-based sensor. Unsupervised classification methods are applied because the plants present different spectral signatures, depending on two main factors: illumination and the affected state. The colour space used in this application is CIELab, based on the decomposition of the colou...

  7. Digital image sensor-based assessment of the status of oat (Avena sativa L.) crops after frost damage.

    Science.gov (United States)

    Macedo-Cruz, Antonia; Pajares, Gonzalo; Santos, Matilde; Villegas-Romero, Isidro

    2011-01-01

    The aim of this paper is to classify the land covered with oat crops, and the quantification of frost damage on oats, while plants are still in the flowering stage. The images are taken by a digital colour camera CCD-based sensor. Unsupervised classification methods are applied because the plants present different spectral signatures, depending on two main factors: illumination and the affected state. The colour space used in this application is CIELab, based on the decomposition of the colour in three channels, because it is the closest to human colour perception. The histogram of each channel is successively split into regions by thresholding. The best threshold to be applied is automatically obtained as a combination of three thresholding strategies: (a) Otsu's method, (b) Isodata algorithm, and (c) Fuzzy thresholding. The fusion of these automatic thresholding techniques and the design of the classification strategy are some of the main findings of the paper, which allows an estimation of the damages and a prediction of the oat production.

  8. Caracterização química de cariopses de aveia (Avena sativa L da cultivar UPF 18

    Directory of Open Access Journals (Sweden)

    Weber Fernanda Hart

    2002-01-01

    Full Text Available O presente trabalho teve por objetivo caracterizar quimicamente uma nova cultivar de aveia, a UPF 18, recomendada pela Comissão Brasileira de Pesquisa de Aveia. Grãos de aveia da safra agrícola de 1999 foram descascados, as cariopses moídas em granulometria inferior a 0,250mm e a farinha avaliada quanto à composição centesimal, composição em aminoácidos, composição em ácidos graxos, índice de solubilidade de nitrogênio, digestibilidade da proteína in vitro, escore químico e energia metabolizável. A cultivar estudada apresentou alto teor de proteínas (15,07%. Os teores de fibra alimentar solúvel e insolúvel foram relativamente altos (5,59 e 7,73%, respectivamente, e, conseqüentemente, o teor de amido foi baixo (41,00%. A composição em aminoácidos foi semelhante ao padrão teórico da FAO, sendo a lisina o primeiro aminoácido limitante. A cultivar apresentou altas concentrações de ácidos graxos insaturados, onde o linoléico, oléico e palmítico representam 96,06% do total. A digestibilidade da proteína in vitro foi de 98,86%, o escore químico de 52,20%, o índice de solubilidade de nitrogênio de 20,24% e a energia metabolizável foi de 326,56kcal/ 100g.

  9. Herança da resistência à ferrugem da folha da aveia (Puccinia coronata f. sp. avenae Fraser & Led. em genótipos brasileiros de aveia branca Inheritance of oat leaf rust (Puccinia coronata f. sp. avenae Fraser & Led. resistance in white oat brazilian genotypes

    Directory of Open Access Journals (Sweden)

    Eduardo Alano Vieira

    2006-02-01

    Full Text Available A ferrugem da folha da aveia é a moléstia mais importante que ataca a cultura da aveia, ocorrendo em praticamente todas as áreas em que a aveia é cultivada. A forma mais indicada para o seu controle é a utilização de cultivares resistentes. Contudo, para que seja alcançada a resistência durável ao patógeno, é necessário que se conheça a genética da resistência à ferrugem da folha em aveia. O objetivo foi determinar a forma de herança da resistência a três isolados de Puccinia coronata f. sp. avenae Fraser & Led., (coletados no sul do Brasil em genótipos brasileiros de aveia branca. Para a determinação da herança da resistência a cada um dos três isolados, foram utilizadas populações F2 geradas por meio de cruzamentos artificiais, entre genótipos resistentes (R e suscetíveis (S e entre genótipos resistentes (R. Desta forma, foram utilizadas populações F2 dos cruzamentos artificiais entre: i URPEL 15 (R x UFRGS 7 (S, UPF 16 (R x UFRGS 7 (S e URPEL 15 (R x UPF 16 (R, para a determinação da herança da resistência ao isolado um (1; ii URPEL 15 (R x UFRGS 7 (S, UPF 18 (R x UFRGS 7 (S e URPEL 15 (R x UPF 18 (R, para a determinação da herança da resistência ao isolado dois (2; iii URPEL 15 (R x UFRGS 7 (S e URPEL 15 (R x UPF 18 (S, para a determinação da herança da resistência ao isolado três (3. Os resultados obtidos evidenciaram que o genótipo URPEL 15 apresenta genes dominantes de resistência aos três isolados de ferrugem da folha da aveia avaliados, que o cultivar UPF 16 apresenta um gene recessivo de resistência ao isolado 1 e o cultivar UPF 18 apresenta um gene recessivo de resistência ao isolado 2. E que os genes de resistência apresentados pelos genótipos URPEL 15, UPF 16 e UPF 18, segregam de forma independente.Oat crown rust is the most important disease for the oat crop, occurring in practically all the areas where oat is cultivated. The most indicated form of control for this disease is

  10. Reconocimiento de alimentos vegetales: caracterización micro-gráfica del grano de avena Reconhecimento de alimentos vegetais: caracterização micrográfica do grão de aveia

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    N.O. Crivaro

    2006-06-01

    Full Text Available Se estudia la estructura micrográfica del grano de seis variedades de avena con la finalidad de su caracterización, para desarrollar parámetros de identificación en alimentos elaborados con la misma y, consecuentemente, determinar su autenticidad, contribuyendo a optimizar la producción, la comercialización y el consumo del cereal y sus derivados. El diseño experimental consistió en el estudio micrográfico de los granos vestidos y desnudos efectuando un análisis morfológico mediante observación con lupa binocular y fotografía, ultraestructural utilizando microscopio electrónico de barrido, micrográfico y micrométrico, empleando el sistema de video microscopia digitalizado y software adecuado. Dada su variabilidad natural, los estudios se efectuaron durante tres temporadas consecutivas sobre muestras cosechadas de variedades procedentes de cultivos de semillas certificadas, y sobre alimentos procesados (avena arrollada y salvado de avena comerciales. Los resultados consistieron en diseños micrográficos, y en valores micrométricos de gránulos de almidón relacionados, además, en modelos matemáticos. En todos los casos se validó estadísticamente. Como parámetros micrográficos de caracterización se seleccionaron las estructuras diferenciales, que revelaron una presencia constante en el vegetal y resistieron los tratamientos tecnológicos, y las características y dimensiones del almidón.Este trabalho estuda a estrutura micrográfica do grão de seis variedades de aveia com a finalidade de sua caracterização para desenvolver parâmetros de identificação em alimentos elaborados com a mesma e, conseqüentemente, determinar sua genuinidade, contribuindo para otimizar a produção, a comercialização e o consumo do cereal e seus derivados. O experimento consistiu no estudo micrográfico dos grãos com casca e sem casca, efetuando análise morfológica mediante observação com lupa binocular e fotografia ultra

  11. Respuesta productiva de conejos alimentados con forraje verde hidropónico de avena, como reemplazo parcial de concentrado comercial Productive response of rabbits fed with green hydroponic oats forage as partial replacement of commercial concentrate

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    Francisco Fabián Fuentes Carmona

    2011-04-01

    Full Text Available La respuesta productiva de conejos raza californiana alimentados con forraje verde hidropónico (FVH de avena como reemplazo parcial de concentrado comercial (CC, fue evaluada en condiciones de desierto en el norte de Chile. Se establecieron cinco tratamientos de alimentación, equivalentes a 0, 25, 50, 75 y 100% de reemplazo de la dieta diaria con FVH, el cual fue cosechado y utilizado directamente diez días después de la siembra. Cuarenta y cinco conejos destetados a los 31 días fueron evaluados en un diseño completamente al azar hasta alcanzar un peso de sacrificio de 2 kg de peso vivo. La calidad del FVH de avena fue considerada como buena, presentando similar valor nutritivo que el CC. Las variables evaluadas y sus respectivos rangos fueron: consumo de materia seca promedio (59.17 - 104.73 g/día, ganancia de peso vivo promedio (16.35 - 29.10 g/animal por día, conversión alimenticia promedio (3.31 - 3.93 kg MS/kg PV, tiempo de peso vivo a sacrificio (53 - 91 días, peso vivo final (1430 - 2044 g/animal, peso de la canal (1235 - 1385 g/animal y rendimiento de la canal (59.19 - 62.25%. El reemplazo de hasta 50% de la dieta base con FVH de avena no afectó significativamente (P The productive response of Californian rabbits fed with hydroponic green oats forage (HGOF as a partial replacement of commercial concentrate (CC was evaluated under desert conditions in northern Chile. Five treatments were established as follow: 0, 25, 50, 75 and 100% replacement of daily diet with HGOF, which was harvested and used directly at 10 days after sowing. Forty-five rabbits weaned at 31 days were evaluated in a completely randomized design until slaughter weight of 2.0 kg. HGOF quality was considered as good, presenting similar nutritional value to CC. The variables assessed and range values were: average dry matter intake (59.17-104.73 g/d, average weight gain (16.35-29.10 g/ rabbit for day, feed conversion average (3.31-3.93 kg DM/ kg LW, time of

  12. Characterization of Three Novel Fatty Acid- and Retinoid-Binding Protein Genes (Ha-far-1, Ha-far-2 and Hf-far-1 from the Cereal Cyst Nematodes Heterodera avenae and H. filipjevi.

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    Fen Qiao

    Full Text Available Heterodera avenae and H. filipjevi are major parasites of wheat, reducing production worldwide. Both are sedentary endoparasitic nematodes, and their development and parasitism depend strongly on nutrients obtained from hosts. Secreted fatty acid- and retinol-binding (FAR proteins are nematode-specific lipid carrier proteins used for nutrient acquisition as well as suppression of plant defenses. In this study, we obtained three novel FAR genes Ha-far-1 (KU877266, Ha-far-2 (KU877267, Hf-far-1 (KU877268. Ha-far-1 and Ha-far-2 were cloned from H. avenae, encoding proteins of 191 and 280 amino acids with molecular masses about 17 and 30 kDa, respectively and sequence identity of 28%. Protein Blast in NCBI revealed that Ha-FAR-1 sequence is 78% similar to the Gp-FAR-1 protein from Globodera pallida, while Ha-FAR-2 is 30% similar to Rs-FAR-1 from Radopholus similis. Only one FAR protein Hf-FAR-1was identified in H. filipjevi; it had 96% sequence identity to Ha-FAR-1. The three proteins are alpha-helix-rich and contain the conserved domain of Gp-FAR-1, but Ha-FAR-2 had a remarkable peptide at the C-terminus which was random-coil-rich. Both Ha-FAR-1 and Hf-FAR-1 had casein kinase II phosphorylation sites, while Ha-FAR-2 had predicted N-glycosylation sites. Phylogenetic analysis showed that the three proteins clustered together, though Ha-FAR-1 and Hf-FAR-1 adjoined each other in a plant-parasitic nematode branch, but Ha-FAR-2 was distinct from the other proteins in the group. Fluorescence-based ligand binding analysis showed the three FAR proteins bound to a fluorescent fatty acid derivative and retinol and with dissociation constants similar to FARs from other species, though Ha-FAR-2 binding ability was weaker than that of the two others. In situ hybridization detected mRNAs of Ha-far-1 and Ha-far-2 in the hypodermis. The qRT-PCR results showed that the Ha-far-1and Ha-far-2 were expressed in all developmental stages; Ha-far-1 expressed 70 times more

  13. Adsorption of Cu(II), Zn(II), Cd(II) and Pb(II) by dead Avena fatua biomass and the effect of these metals on their growth.

    Science.gov (United States)

    Areco, María Mar; Saleh-Medina, Leila; Trinelli, María Alcira; Marco-Brown, Jose Luis; Dos Santos Afonso, María

    2013-10-01

    The biosorption of copper(II), zinc(II), cadmium(II) and lead(II) from aqueous solutions by dead Avena fatua biomass and the effect of these metals on the growth of this wild oat were investigated. Pseudo-first- and second-order and intra-particle diffusion models were applied to describe the kinetic data and to evaluate the rate constants. The adsorption kinetics of all the metals follows a pseudo-second-order model. The adsorption capacity was determined, and the Freundlich and Langmuir models were applied. The experimental data obtained for all the metals are best described by the Langmuir model. A. fatua was characterized using scanning electron microscopy (SEM), energy-dispersive X-ray spectroscopy (EDS), and zeta potential. The results obtained evidence the presence of Zn(II), Cu(II), Cd(II) or Pb(II) on the surface of the weed. The growth of A. fatua was affected by the presence of all metals. The decrease in the growth rate with increasing metal concentration was more noticeable for zinc. Copyright © 2013 Elsevier B.V. All rights reserved.

  14. Avaliação da composição química e da digestibilidade in vitro da mistura aveia IAPAR 61 (Avena strigosa Schreb + ervilha forrageira (Pisum arvense L. em diferentes alturas sob pastejo Evaluation of chemical composition and in vitro digestibility of mixture of oat IAPAR 61 (Avena strigosa Schreb cv IAPAR 61 + field pea (Pisum arvense L. under grazing in different sward heights

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    Márcia Mascarenhas Grise

    2001-06-01

    Full Text Available O objetivo do trabalho foi avaliar o efeito das alturas (8,9; 10,0; 11,2; 11,8; 13,3; 13,6; 14,6; 18,2 cm de pastos consorciados de aveia IAPAR 61 (Avena strigosa Schreb cv IAPAR 61 com ervilha forrageira (Pisum arvense L. sob pastejo sobre a relação folha/colmo (F/C, os teores de proteína bruta (PB, fibra em detergente neutro (FDN e fibra em detergente ácido (FDA e a digestibilidade in vitro da matéria seca (DIVMS e da matéria orgânica (DIVMO. O delineamento experimental usado foi o inteiramente casualizado, com duas repetições. A relação F/C não foi influenciada pela altura do pasto, porém apresentou comportamento quadrático com o avanço na maturidade do pasto. Os teores de PB apresentaram comportamento quadrático ao longo do período experimental, devido à interação entre altura do pasto e o tempo. Os teores de FDN e FDA mostraram um comportamento quadrático ao longo do período experimental, ocorrendo uma diminuição dos mesmos quando as plantas se apresentavam mais baixas e, uma elevação, quando as plantas estavam mais altas, isto ocorreu em função da interação das variáveis tempo e altura. A DIVMS e a DIVMO tiveram incrementos lineares em função do aumento da altura do pasto, porém com comportamento quadrático no tempo (dias em todas as alturas, sendo mais elevadas nas alturas intermediárias do pasto.The objective of this work was to evaluate the effect of different sward heights (8.9, 10.0, 11.2, 11.8; 13.3; 13.6; 14.6; 18.2 cm in the mixture of black oat IAPAR 61 (Avena strigosa Schreb cv IAPAR 61 + field pea (Pisum arvense L., under grazing, on leaf/stem ratio (L/S, crude protein (CP, neutral detergent fiber (NDF and acid detergent fiber (ADF contents and dry matter (DMIVD and of organic matter (OMIVD in vitro digestibility. A completely randomized experimental design with two replicates was used. L/S ratio was not influenced by sward height, although it presented quadratic behavior with the progress of

  15. STUDIES ON VEGETATIVE DEVELOPMENT OF NAKED OAT (AVENA SATIVA GREX VAR. NUDAE MORDV VARIETY "MINA" GROWN IN THE CONDITIONS OF ORGANIC FARMING IN SARKAR AGRO REGION

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    Violeta Vateva

    2016-07-01

    Full Text Available Naked oats is varietal variation of oats, whose potential is necessary to examine for the various agricultural regions in Bulgaria. The objective of this experiment is to track down and to determine opportunities for growing Bulgarian naked oat variety "Mina", in ecological conditions of Sakar agricultural region. The surveys were carried out during the period 2009-2011 in experimental base for the Sakar mountain of ISSAPP "N. Pushkarov" Sofia. Under the too specific conditions of Sakar agricultural region and grown in organic farming the naked oats variety "Mina" shows good adaptability for growth and development. The vegetation period lasts 93-115 days. In the initial phases of its development the naked oats grew by 1.9 – 7.6 cm, in the phases of the active growing season grew by 8.3-12.3 cm. For the vegetation period the naked oats variety "Mina" grew by 64.9-74.2 cm

  16. Dipeptidyl Peptidase IV Inhibitory Peptides Derived from Oat (Avena sativa L.), Buckwheat (Fagopyrum esculentum), and Highland Barley (Hordeum vulgare trifurcatum (L.) Trofim) Proteins.

    Science.gov (United States)

    Wang, Feng; Yu, Guoyong; Zhang, Yanyan; Zhang, Bolin; Fan, Junfeng

    2015-11-04

    Peptides released from oat, buckwheat, and highland barley proteins were examined for their in vitro inhibitory effects on dipeptidyl peptidase IV (DPP4), an enzyme that deactivates incretin hormones involved in insulin secretion. All of the hydrolysates exhibited DPP4 inhibitory activities, with IC50 values ranging from 0.13 mg/mL (oat glutelin alcalase digestion) to 8.15 mg/mL (highland barley albumin tryptic digestion). The lowest IC50 values in gastrointestinal, alcalase, and tryptic digestions were 0.99 mg/mL (oat flour), 0.13 mg/mL (oat glutelin), and 1.83 mg/mL (highland barley glutelin). In all, 35 peptides of more than seven residues were identified in the tryptic hydrolysates of oat globulin using liquid chromatography-mass spectroscopy. Peptides LQAFEPLR and EFLLAGNNK were synthesized and their DPP4 inhibitory activities determined. LQAFEPLR showed high in vitro DPP4 inhibitory activity with an IC50 value of 103.5 μM.

  17. Histological analysis and 3D reconstruction of winter cereal crowns recovering from freezing: a unique response in oat (Avena sativa L.).

    Science.gov (United States)

    Livingston, David P; Henson, Cynthia A; Tuong, Tan D; Wise, Mitchell L; Tallury, Shyamalrau P; Duke, Stanley H

    2013-01-01

    The crown is the below ground portion of the stem of a grass which contains meristematic cells that give rise to new shoots and roots following winter. To better understand mechanisms of survival from freezing, a histological analysis was performed on rye, wheat, barley and oat plants that had been frozen, thawed and allowed to resume growth under controlled conditions. Extensive tissue disruption and abnormal cell structure was noticed in the center of the crown of all 4 species with relatively normal cells on the outside edge of the crown. A unique visual response was found in oat in the shape of a ring of cells that stained red with Safranin. A tetrazolium analysis indicated that tissues immediately inside this ring were dead and those outside were alive. Fluorescence microscopy revealed that the barrier fluoresced with excitation between 405 and 445 nm. Three dimensional reconstruction of a cross sectional series of images indicated that the red staining cells took on a somewhat spherical shape with regions of no staining where roots entered the crown. Characterizing changes in plants recovering from freezing will help determine the genetic basis for mechanisms involved in this important aspect of winter hardiness.

  18. In vitro inhibitory effect on pancreatic lipase activity of subfractions from ethanol extracts of fermented Oats (Avena sativa L.) and synergistic effect of three phenolic acids.

    Science.gov (United States)

    Cai, Shengbao; Wang, Ou; Wang, Mengqian; He, Jianfeng; Wang, Yong; Zhang, Di; Zhou, Feng; Ji, Baoping

    2012-07-25

    The purpose of the present work is to study the pancreatic lipase inhibitory effects of different subfractions (n-hexane, ethyl acetate (EA), n-butanol, and water) from ethanol extracts of nonfermented and fungi-fermented oats and to delineate the interactions of three primary phenolic acids in the EA subfractions. The EA subfraction showed the highest inhibitory effect on pancreatic lipase activity at 1.5 mg/mL compared to the other subfractions, regardless of whether the oats were fermented. Meanwhile, both of the EA subfractions of two fungi-fermented oats demonstrated more effective inhibitory activity than that of nonfermented oats. A positive correlation between the total phenolics content and inhibitory activity was found. The inhibitory ability of the EA subfraction from nonfermented or fermented oats also displayed a dose-dependent effect. The standards of caffeic, ferulic, and p-coumaric acids, mainly included in EA subfractions of fermented oats, also displayed a dose-dependent inhibitory effect. A synergistic effect of each binary combination of p-coumaric, ferulic, and caffeic acids was observed, especially at 150.0 μg/mL. Those results indicate that fungi-fermented oats have a more effective inhibitory ability on pancreatic lipase and polyphenols may be the most effective component and could be potentially used for dietary therapy of obesity.

  19. Dry matter yield and forage quality traits of oat (Avena sativa L. under integrative use of microbial and synthetic source of nitrogen

    Directory of Open Access Journals (Sweden)

    M. Bilal

    2017-07-01

    Full Text Available The natural microbes are potential contributor to build up soil nitrogen through transformation of molecular nitrogen to plant available forms. Therefore, in the present study, we investigated the contribution of biofertilizer to reduce the synthetic nitrogen application without deteriorating the yield and forage quality. The supplementary nitrogen rates included 0, 40, 80 and 120 kg ha−1 and the seed inoculation was carried out with the mixture of Azospirillum + Azotobacter spp. The experiment was laid out in randomized complete block design with factorial arrangement. The results indicated that organic matter contents and ether extractable fat were negatively associated with both nitrogen and inoculation factors. The inoculation produced 6.58%, 9.58%, 2.51%, 16.94%, 10.26%, 17.59%, 14.02%, 33.81% and 66.18% more No. tillers, plant height, leaf to stem ratio, dry matter yield, mineral matter contents, crude fibre, crude protein, crude protein yield and total digestible crude protein yield, respectively over uninoculation. The interactive effects indicated that inoculation alone without nitrogen application produced 19.16% and 6.87% more dry matter yield and crude protein (%, respectively. The beneficiary effects of biofertilizers on growth and dry matter of oat were more pronounced at intermediate level of inorganic nitrogen which was gradually decreased at higher nitrogen levels. The CP, CPY and DCPY achieved with inoculation alone were statistically equivalent to plots fertilized with 0 and 40 kg N ha−1. It is clear that plots sown with inoculated seeds must be fertilized with 80 kg N to produce higher dry matter and economic returns. However, the highest protein contents in dry matter were recorded with highest fertilization level along with inoculation. By giving due attention to stimulatory effects of bacterial species in the present study, it is therefore, recommended to integrate the use of biofertilizers with supplemental dose of synthetic nitrogen source to sustain crop production.

  20. The effect of different agrotechnical levels on weed infestation in crops of naked and husked varieties of oat (Avena sativa L.

    Directory of Open Access Journals (Sweden)

    Sylwia Andruszczak

    2012-12-01

    Full Text Available The present study was carried out in the period 2007- 2009 in the Experimental Farm in Bezek near the city of Chełm. The aim of the investigation was to compare weed infestation of the husked (Krezus and naked (Cacko oat cultivars cultivated under conditions of different weed control treatments. The following weed control levels were compared: A - control object; B - harrowing twice; C - application of the herbicide Mustang 306 SE; D - herbicide Mustang 306 SE + foliar fertilizer Insol 3; E - herbicide Mustang 306 SE + two foliar fertilizers: Insol 3 and FoliCare 18:18:18. The husked oat cv. Krezus was more competitive against weeds. Number of dicotyledonous weeds and of monocotyledonous weeds, total weeds, and air-dry weight of above-ground parts of weeds in the crop of this cultivar were all significantly lower compared to the naked cv. Cacko. From the group of dicotyledonous species, Chenopodium album, Galinsoga parviflora, Matricaria maritima ssp. inodora, Polygonum aviculare, and Stellaria media were the dominant species in the crops of the oat varieties under investigation, whereas among the monocotyledonous species Echinochloa crus-galli, Setaria pumila, Apera spica-venti, and Elymus repens occurred in greatest numbers. The application of the herbicide Mustang 306 SE decreased the number of dicotyledonous weeds and air-dry weight of weeds, compared to the treatment in which mechanical weed control had been used.

  1. Conformational heterogeneity and propagation of structural changes in the LOV2/Jα domain from Avena sativa phototropin 1 as recorded by temperature-dependent FTIR spectroscopy

    NARCIS (Netherlands)

    Alexandre, M.T.A.; van Grondelle, R.; Hellingwerf, K.J.; Kennis, J.T.M.

    2009-01-01

    Phototropins control phototropism, chloroplast movement, stomatal opening, and leaf expansion in plants. Phototropin 1 (phot1) is composed of a kinase domain linked to two blue light-sensing domains, LOV2 and LOV1, which bind flavin mononucleotide. Disruption of the interaction between the LOV2

  2. Europium Uptake and Partitioning in Oat (Avena sativa) Roots as studied By Laser-Induced Fluorescence Spectroscopy and Confocal Microscopy Profiling Technique

    International Nuclear Information System (INIS)

    Fellows, Robert J.; Wang, Zheming; Ainsworth, Calvin C.

    2003-01-01

    The uptake of Eu3+ by elongating oat plant roots was studied by fluorescence spectroscopy, fluorescence lifetime measurement, as well as laser excitation time-resolved confocal fluorescence profiling technique. The results of this work indicated that the initial uptake of Eu(III) by oat root was most evident within the apical meristem of the root just proximal to the root cap. Distribution of assimilated Eu(III) within the roots differentiation and elongation zone was non-uniform. Higher concentrations were observed within the vascular cylinder, specifically in the phloem and developing xylem parenchyma. Elevated levels of the metal were also observed in the root hairs of the mature root. The concentration of assimilated Eu3+ dropped sharply from the apical meristem to the differentiation and elongation zone and then gradually decreased as the distance from the root cap increased. Fluorescence spectroscopic characteristics of the assimilated Eu3+ suggested that the Eu3+ exists a s inner-sphere mononuclear complexes inside the root. This work has also demonstrated the effectiveness of a time-resolved Eu3+ fluorescence spectroscopy and confocal fluorescence profiling techniques for the in vivo, real-time study of metal[Eu3+] accumulation by a functioning intact plant root. This approach can prove valuable for basic and applied studies in plant nutrition and environmental uptake of actinide radionuclides

  3. Eficácia de herbicidas na dessecação de aveia-preta para formação de cobertura morta em plantio direto Herbicides efficacy on black oats (Avena strigosa desiccation in no-tillage system

    Directory of Open Access Journals (Sweden)

    Francisco Skóra Neto

    1995-01-01

    Full Text Available A dessecação da aveia-preta (Avena strigosa schieb para formação de cobertura do solo foi feita com sulfosate nas doses de 96, 288 e 480 g/ha e paraquat + diuron nas doses de 100+50, 200+100 e 300+150 g/ha em volumes de aplicação de 100, 214 e 325 l/ha de calda. A formulação de paraquat + diuron adicionou-se um surfactante não-iônico a 0,1% v/v. O delineamento experimental utilizado foi o de blocos ao acaso com quatro repetições e os tratamentos foram dispostos em esquema de parcelas subdivididas. Nas parcelas, estudaram-se as doses dos herbicidas e nas subparcelas, os volumes de aplicação. O Sulfosate dessecou a aveia-preta nas doses de 288 e 480 g/ha, nos três volumes de aplicação, não se observando qualquer rebrota aos 32 dias após a pulverização. A formulação de paraquat + diuron foi ineficiente na dessecação da aveia-preta.Black oats (Avena strigosa desiccation for mulching was done with sulfosate at 96, 288 and 480 g/ha and the formulation of paraquat + diuron at 100+50, 200+100 and 300+150 g/ha at spraying volumes of 100, 214 and 325 I/ha. A nonionic surfactant was added to the paraquat+diuron solution. The experimental design was a split-plot randomized block with four replicates. Herbicide doses were the main plot treatments and the spraying volumes, the sub-plot treatments. Plants of black oats were controled with sulfosate doses of 288 and 480 g/ha at the three spraying volumes. There was no regrowth at 32 days after the spraying. Paraquat + diuron was not efficient for desiccating black oats.

  4. Sēklu dīgtspēja un miera perioda pārtraukšanās dažādās Latgales un Vidzemes vējauzas (Avena fatua L.) populācijās

    OpenAIRE

    Erdmane, Jolanta

    2017-01-01

    Sakarā ar nezāļu monitoringā novēroto vējauzas (Avena fatua L.) plašo izplatību Latvijas kultūraugu sējumos un stādījumos, nepieciešamas īpašas metodes un saimniekošanas paņēmieni, lai ierobežotu šīs nezāles savairošanos. Vējauza ir viengadīgs, sējas auzai līdzīgs graudzāļu dzimtas augs, kas vairojas ar sēklām. Sēklām ir fizioloģiski (miera periods, pagarināts dīgšanas periods) un strukturāli (hidrofīls akots) pielāgojumi, kas palīdz augam ātri un efektīvi izplatīties un konkurēt ar kutūraugi...

  5. PREDIÇÃO DOS TEORES DE COMPOSTOS FENÓLICOS E FLAVONOIDES NA PARTE AÉREA DAS ESPÉCIES Secale cereale L., Avena strigosa L. E Raphanus sativus L. POR MEIO DE ESPECTROSCOPIA NO INFRAVERMELHO PRÓXIMO (NIR

    Directory of Open Access Journals (Sweden)

    Monique Souza

    Full Text Available Spectroscopy associated with chemometrics is a non-destructive method of the samples for the prediction of phenolic compounds. The objective of the work was to apply the near infrared spectroscopy (NIR technique for the prediction of phenolic compounds and flavonoids in aerial part samples of cover crops plants Raphanus sativus L., Secale cereale L. and Avena strigosa L. Samples were collected at 60, 80 and 100 days after sowing (DAS of the plants and, after lodging (DAA, at 15 and 30 days, in an experiment implanted in the field, in the city of Ituporanga, Santa Catarina. The samples were homogenized, identified, transported on dry ice, lyophilized, crushed, sieved and stored at -20 °C for analysis. For the calibration, 84 samples were used and for the validation 10 samples. The combination of NIR spectroscopy and multivariate analysis by partial least squares regression allowed the development of prediction models of phenolics and flavonoids with associated errors averaging 10%. NIR spectroscopy is recommended for the development of calibration models because it allows to non-destructive infer phenolic and total flavonoid contents, with high analytical frequency, without the use of reagents and other inputs required by the reference method, with results very close to those obtained in the laboratory.

  6. Componentes morfológicos e produção de forragem de pastagem de aveia e azevém manejada em diferentes alturas Morphological components and forage production of oat (Avena strigosa, Schreb and annual ryegrass (Lolium multiflorum, Lam pasture managed at different heights

    Directory of Open Access Journals (Sweden)

    Angelo Antonio Queirolo Aguinaga

    2008-09-01

    Full Text Available Avaliou-se a dinâmica de produção de forragem em pastagem de aveia-preta (Avena strigosa Schreb e azevém (Lolium multiflorum Lam manejada em diversas alturas de manejo com o objetivo de evidenciar as potencialidades dessa mistura em sistemas de integração lavoura-pecuária. Os tratamentos consistiram de quatro alturas de manejo da pastagem (10; 20; 30 e 40 cm, medidas com bastão graduado e avaliadas em blocos casualizados com três repetições. O método de pastejo foi contínuo, com taxa de lotação variável. Utilizaram-se bezerros de corte mestiços com 10 meses de idade e peso médio inicial de 210 kg, respectivamente. As características da pastagem estudadas foram: massa de forragem (MF; taxa de acúmulo de forragem (TAC; produção total de forragem (PTMS; e quantificação dos componentes morfológicos da pastagem (colmo, lâmina e material morto. A massa de forragem aumentou de forma linear de acordo com a altura do pasto, uma vez que, para cada cm de aumento na altura superior a 10 cm, a matéria seca aumentou aproximadamente 90 kg/ha. Não houve efeito das alturas da pastagem sobre a TAC ou sobre a PTMS, cujos valores médios foram de 66,8 kg/ha/dia de MS e 10.721 kg/ha de MS, respectivamente. A porcentagem de folhas de azevém foi maior que a de folhas de aveia nos três períodos de avaliação e, na altura de 10 cm, foi superior à obtida nas demais alturas na última avaliação (em torno de 20% da participação total da massa de forragem. A aveia apresenta rápido desenvolvimento inicial e diminuição na produção nos períodos posteriores de desenvolvimento.Forage growth dynamic in an Oat (Avena strigosa, Schreb + Ryegrass (Lolium multiflorum, Lam pasture managed at different grazing heights was evaluated in order to access the mixed-sward potential in a crop-livestock integrated system. Treatments were four sward grazing heights (10, 20, 30, and 40 cm, measured with a sward-stick. The experimental design was a

  7. Germination induction of dormant Avena fatua caryopses by KAR(1) and GA(3) involving the control of reactive oxygen species (H2O2 and O2(·-)) and enzymatic antioxidants (superoxide dismutase and catalase) both in the embryo and the aleurone layers.

    Science.gov (United States)

    Cembrowska-Lech, Danuta; Koprowski, Marek; Kępczyński, Jan

    2015-03-15

    Avena fatua L. caryopses did not germinate at 20 °C in darkness because they were dormant. However, they were able to germinate in the presence of karrikinolide (KAR1), a key bioactive compound present in smoke, and also in the presence of gibberellin A3 (GA3), a commonly known stimulator of seed germination. The aim of this study was to collect information on a possible relationship between the above regulators and abscisic acid (ABA), reactive oxygen species (ROS) and ROS scavenging antioxidants in the regulation of dormant caryopses germination. KAR1 and GA3 caused complete germination of dormant A. fatua caryopses. Hydrogen peroxide (H2O2), compounds generating the superoxide (O2(·-)), i.e. menadione (MN), methylviologen (MV) and an inhibitor of catalase activity, aminotriazole (AT), induced germination of dormant caryopses. KAR1, GA3, H2O2 and AT decreased ABA content in embryos. Furthermore, KAR1, GA3, H2O2, MN, MV and AT increased α-amylase activity in caryopses. The effect of KAR1 and GA3 on ROS (H2O2, O2(·-)) and activities of the superoxide dismutase (SOD) and catalase (CAT) were determined in caryopses, embryos and aleurone layers. SOD was represented by four isoforms and catalase by one. In situ localization of ROS showed that the effect of KAR1 and GA3 was associated with the localization of hydrogen peroxide mainly on the coleorhiza. However, the superoxide was mainly localized on the surface of the scutellum. Superoxide was also detected in the protruding radicle. Germination induction of dormant caryopses by KAR1 and GA3 was related to an increasing content of H2O2, O2(·-)and activities of SOD and CAT in embryos, thus ROS homeostasis was probably required for the germination of dormant caryopses. The above regulators increased the content of ROS in aleurone layers and decreased the activities of SOD and CAT, probably leading to the programmed cell death. The presented data provide new insights into the germination induction of A. fatua dormant

  8. Production of aerial biomass and equivalent land use in alfalfa (Medicago sativa L.) intercropping

    International Nuclear Information System (INIS)

    Pereyra, T. W.; Pagliaricci, H. R.; Ohanian, A. E.; Bonvillani, M. J.

    2013-01-01

    Productivity increase has traditionally been associated to yield increase through breeding and crop management practices. Nevertheless, if production is considered per area and time unit, the intercropping system may be another way to improve cost-effectiveness. The objective of the experiment was to determine the produced biomass and the equivalent land use in alfalfa (Medicago sativa L.) monocrop and intercrops with sorghum Sudan (Sorghum sudanense L.) and oat (Avena sativa L.). The aerial biomass of all the treatments (expressed per surface unit) and the equivalent land use were determined. The design was completely randomized, arranged in blocks with two repetitions. The results were subject to an ANAVA and the means were compared through Duncan's test, by means of the statistical pack INFOSTAT. The alfalfa-sorghum intercrop triplicated the alfalfa production with regards to the monocrop, while alfalfa-oat did not exceed the production of pure alfalfa in the winter months. The alfalfa-sorghum intercrop was 57 % more efficient in land use than the respective monocrops, while alfalfa-oat did not surpass the unit. (author)

  9. Acute effects of a wild green-oat (Avena sativa) extract on cognitive function in middle-aged adults: A double-blind, placebo-controlled, within-subjects trial.

    Science.gov (United States)

    Kennedy, David O; Jackson, Philippa A; Forster, Joanne; Khan, Julie; Grothe, Torsten; Perrinjaquet-Moccetti, Tania; Haskell-Ramsay, Crystal F

    2017-02-01

    A wild green-oats extract (Neuravena ® ) containing a range of potentially bioactive components, including flavonoids and triterpene saponins, has previously been shown to enhance animal stress responses and memory, and improve cognitive performance in humans at a dose of 1600 mg. Methods This double-blind, placebo-controlled, counterbalanced cross-over study assessed the effects of single doses of the green-oat extract (GOE) across a broad range of cognitive domains in healthy adults aged 40-65 years who self-reported that they felt that their memory had declined with age. Participants attended on six occasions, receiving a single dose of either placebo, 800, or 1600 mg GOE on each occasion, with the counterbalanced order of treatments repeated twice for each participant. Cognitive function was assessed with a range of computerized tasks measuring attention, spatial/working/episodic memory, and executive function pre-dose and at 1, 2.5, 4, and 6 hours post-dose. Results The results showed that 800mg GOE increased the speed of performance across post-dose assessments on a global measure including data from all of the timed tasks. It also improved performance of a delayed word recall task in terms of errors and an executive function task (Peg and Ball) in terms of decreased thinking time and overall completion time. Working memory span (Corsi blocks) was also increased, but only on the second occasion that this dose was taken. Discussion These results confirm the acute cognitive effects of GOE seen in previous research, and suggest that the optimal dose lies at or below 800 mg.

  10. Comparative study of the effects of solid-state fermentation with three filamentous fungi on the total phenolics content (TPC), flavonoids, and antioxidant activities of subfractions from oats (Avena sativa L.).

    Science.gov (United States)

    Cai, Shengbao; Wang, Ou; Wu, Wei; Zhu, Songjie; Zhou, Feng; Ji, Baoping; Gao, Fengyi; Zhang, Di; Liu, Jia; Cheng, Qian

    2012-01-11

    The aim of present work was to investigate the effect of solid-state fermentation with filamentous fungi (Aspergillus oryzae var. effuses, Aspergillus oryzae, and Aspergillus niger) on total phenolics content (TPC), flavonoids, and antioxidant activities of four subfractions of oat, namely, n-hexane, ethyl acetate (EA), n-butanol, and water, and compare them to their corresponding subfractions of unfermented oat. The TPC and total flavonoids increased dramatically, especially in EA subfractions (p < 0.05). The levels of antioxidant activity of subfractions were also significantly enhanced (p < 0.05). The highest antioxidant activities were also found in the EA subfractions. The polyphenols in EA were analyzed by high-performance liquid chromatography at 280 nm. Most polyphenols were increased remarkably, especially ferulic and caffeic acids. There was a clear correlation between the TPC and antioxidant activity. In conclusion, fungi fermentation is a potential bioprocess for increasing the TPC, flavonoids, and antioxidant activities of oat-based food.

  11. In vitro inhibition of platelet aggregation by peptides derived from oat (Avena sativa L.), highland barley (Hordeum vulgare Linn. var. nudum Hook. f.), and buckwheat (Fagopyrum esculentum Moench) proteins.

    Science.gov (United States)

    Yu, Guoyong; Wang, Feng; Zhang, Bolin; Fan, Junfeng

    2016-03-01

    Bioactive compounds present in foods could have beneficial effects on human health. In this study, we report the capacity of peptides released from oat, highland barley, and buckwheat proteins after enzymatic digestion to inhibit platelet aggregation in vitro. All hydrolysates showed high antiplatelet activity, with IC50 values of 0.282mg/ml (oat flour gastrointestinal hydrolysate, 6h) to 2.496mg/ml (highland barley glutelin tryptic hydrolysate, 14h) in a dose-dependent manner. Thirty-eight peptides with more than seven residues were identified in the tryptic hydrolysates of oat globulin. Results of computational modeling revealed that nine peptides, including ALPIDVLANAYR, EFLLAGNNKR, GEEFGAFTPK, QLAQIPR, LQAFEPLR, ALPVDVLANAYR, GEEFDAFTPK, QKEFLLAGNNK, and TNPNSMVSHIAGK bound the cyclooxygenase-1 active centers with low binding energy (-6.5 to -7.5kcal/mol). This is the first report to identify antiplatelet peptides from grain hydrolysates and the binding modes at the molecular level, leading to their possible use as functional food ingredients to prevent thrombosis. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. MODULATION OF H+-ATPASE ACTIVITY BY FUSICOCCIN IN PLASMA-MEMBRANE VESICLES FROM OAT (AVENA-SATIVA L) ROOTS - A COMPARISON OF MODULATION BY FUSICOCCIN, TRYPSIN, AND LYSOPHOSPHATIDYLCHOLINE

    NARCIS (Netherlands)

    LANFERMEIJER, FC; PRINS, HBA

    The fungal phytotoxin fusicoccin affects various transport processes in the plasma membrane of plant cells. The plasma membrane (PM) H+-ATPase (EC 3.6.1.35) seems to be the primary target of fusicoccin action. The kinetics of the stimulation of the PM H+-ATPase by fusicoccin was studied in PM

  13. Effect of concentrate supplementation on feed consumption, nutrient utilization and blood metabolite profile in captive spotted deer (Axis axis) fed oat (Avena sativa) and berseem (Trifolium alexandrinum) fodders based diet.

    Science.gov (United States)

    Suresh, C; Das, A; Katole, Shrikant; Saini, Mohini; Swarup, D

    2013-03-01

    This experiment was conducted to determine the optimum level of a maize-soybean meal-wheat bran concentrate supplement fed to captive spotted deer fed an oat and berseem fodder-based diet. Twelve adult spotted deer [64-76 kg body weight (BW)] were distributed into three groups of four each and were housed individually. A diet consisting of 5 kg of oat fodder and 5.5 kg of berseem fodder was offered to each one of the experimental animals. The animal in group I received no supplementary concentrate, whereas, those in groups II and III received 0.5 and 1 kg of supplementary concentrate, respectively. A 60 days digestibility trial was conducted with a 5 days collection period on Days 55-59 of the trial. Blood samples were collected from all animals on Day 60 of the experiment. Average daily dry matter intake (DMI) was 1,224, 1,613, and 1,574 g/day in groups I, II, and III, respectively. Dry matter (DM) and organic matter (OM) intake was lowest (P II and I. Digestibility of neutral detergent fiber was highest (P II. Digestibility of OM and CP was lowest (P energy was highest (P II (69.3%) and I (66.2%). Digestible energy (DE) intake (kcal/kg BW(0.75) ) was highest (P II (180.9) and I (129.8). Initial BW was 72.7, 72.5, and 71.0 kg, whereas, final BW was 71.0, 72.7, and 73.5 kg, in groups I, II and III, respectively. Average daily change in body mass was significantly (P II, and III, respectively. Blood glucose and cholesterol concentration was highest (P II and I. Serum concentration of Cu and Zn was highest (P II and I. Supplementation of forage only diet with 0.5 kg of concentrate mixture increased intake and digestibility of nutrients, without change in body mass. Animals fed 1 kg of supplementary concentrate received energy in excess of requirements, were consistently gaining body mass and were prone to obesity. Thus, it is a right strategy to supplement forage only diet of captive spotted deer with 0.5 kg of concentrate. © 2013 Wiley Periodicals, Inc.

  14. Effect of no-tillage crop rotation systems on nutrient status of a rhodic ...

    African Journals Online (AJOL)

    The rotation crops, mucuna (Mucuna aterrima Piper&Tracy), cajanus (Cajanus cajan (L.) Millsp, rye (Secale cereale L)., oat (Avena sativa L.), pisum (Pisum sativum L.), wheat (Triticum aestivum L.), crotolaria (Crotolaria juncea L.), and black oats (Avena strigosa Scheib), were planted in winter whereas maize and soybean ...

  15. Duplication and diversification of the LEAFY HULL STERILE1 and Oryza sativa MADS5 SEPALLATA lineages in graminoid Poales

    Directory of Open Access Journals (Sweden)

    Christensen Ashley R

    2012-02-01

    Full Text Available Abstract Background Gene duplication and the subsequent divergence in function of the resulting paralogs via subfunctionalization and/or neofunctionalization is hypothesized to have played a major role in the evolution of plant form. The LEAFY HULL STERILE1 (LHS1 SEPALLATA (SEP genes have been linked with the origin and diversification of the grass spikelet, but it is uncertain 1 when the duplication event that produced the LHS1 clade and its paralogous lineage Oryza sativa MADS5 (OSM5 occurred, and 2 how changes in gene structure and/or expression might have contributed to subfunctionalization and/or neofunctionalization in the two lineages. Methods Phylogenetic relationships among 84 SEP genes were estimated using Bayesian methods. RNA expression patterns were inferred using in situ hybridization. The patterns of protein sequence and RNA expression evolution were reconstructed using maximum parsimony (MP and maximum likelihood (ML methods, respectively. Results Phylogenetic analyses mapped the LHS1/OSM5 duplication event to the base of the grass family. MP character reconstructions estimated a change from cytosine to thymine in the first codon position of the first amino acid after the Zea mays MADS3 (ZMM3 domain converted a glutamine to a stop codon in the OSM5 ancestor following the LHS1/OSM5 duplication event. RNA expression analyses of OSM5 co-orthologs in Avena sativa, Chasmanthium latifolium, Hordeum vulgare, Pennisetum glaucum, and Sorghum bicolor followed by ML reconstructions of these data and previously published analyses estimated a complex pattern of gain and loss of LHS1 and OSM5 expression in different floral organs and different flowers within the spikelet or inflorescence. Conclusions Previous authors have reported that rice OSM5 and LHS1 proteins have different interaction partners indicating that the truncation of OSM5 following the LHS1/OSM5 duplication event has resulted in both partitioned and potentially novel gene

  16. Oryza sativa

    Indian Academy of Sciences (India)

    2014-04-25

    Apr 25, 2014 ... [Wang L. and Zhang H. 2014 Genomewide survey and characterization of metacaspase gene family in rice (Oryza sativa). J. Genet. 93, 93–102]. Introduction. Programmed cell death ..... Arabidopsis, both proline and glutamine were found to be enriched in predicted N-terminal prodomain (Vercammen et al.

  17. Cover crops for managing weeds, soil chemical fertility and nutritional status of organically grown orange orchard in Sicily

    Directory of Open Access Journals (Sweden)

    Rosario Paolo Mauro

    2015-06-01

    Full Text Available Cover crops can offer significant advantages in the agronomic management of citrus orchards in Mediterranean environments. Therefore, a three-year research was conducted in eastern Sicily aimed at studying the effects of four cover crop sequences (Sinapis arvensis-Trigonella foenum-graecum-T. foenum-graecum; Medicago scutellata-Avena sativa-Lolium perenne; Vicia faba minor-A. sativa-A. sativa; A. sativa-V. faba. minor-L. perenne on weeds, major soil chemical properties and nutritional status of an organically grown orange orchard. The results highlighted that, among the studied cover crop sequences, Vicia faba-Avena-Avena was the most beneficial for weeds control within the orchard (92%, of cover crop cover, and 586 and 89 g DW m–2 of cover crop aboveground biomass and weeds aboveground biomass, respectively. Overall, the chemical fertility of the soil was positively influenced. In particular, it was observed an increase of the content of total nitrogen and available phosphorus in the soil by both Sinapis-Trigonella-Trigonella (0.75 g kg–1 and 59.0 mg kg–1, respectively and Vicia faba-Avena-Avena (0.70 g kg–1 and 56.0 mg kg–1, respectively cover crop sequences. Medicago-Avena-Lolium sequence seemed to be the most useful to ensure a better nutritional status of the orange orchard.

  18. Characteristics of extracurricular physical activity and cognitive performance in adolescents. The AVENA study.

    Science.gov (United States)

    Esteban-Cornejo, Irene; Gómez-Martínez, Sonia; Tejero-González, Carlos M; Castillo, Ruth; Lanza-Saiz, Ricardo; Vicente-Rodríguez, German; Marcos, Ascensión; Martinez-Gomez, David

    2014-01-01

    The aim of this report was to examine the associations between some characteristics (i.e., structure and number) of extracurricular physical activity (EPA) and cognitive performance in adolescents. A total of 1662 adolescents (880 girls; 13.0-18.5 years) from 5 Spanish cities (Granada, Madrid, Murcia, Santander and Zaragoza) were included in this study. Structure (organised and non-organised) and number of EPAs, and participation at vigorous intensity during EPA were self-reported. Cognitive performance (verbal, numeric and reasoning abilities, and an overall score) was measured with the "SRA-Test of Educational Ability". Results showed that vigorous EPA was positively associated with all cognitive variables. Adolescents who practiced an organised EPA had higher scores in 3 of the 4 cognitive variables than those who practiced a non-organised EPA (all P cognitive performance in all variables than the group who participated in only one EPA (all P cognitive performance. Therefore, structure and number of EPAs may positively influence cognitive performance in adolescents. Participating in multiple, organised EPA may have benefits for cognitive performance.

  19. Phenolic and short-chained aliphatic organic acid constituents of wild oat (Avena fatua L.) seeds.

    Science.gov (United States)

    Gallagher, R S; Ananth, R; Granger, K; Bradley, B; Anderson, J V; Fuerst, E P

    2010-01-13

    The objective of this research was to identify and quantify the phenolic and short-chained aliphatic organic acids present in the seeds of three wild-type populations of wild oat and compare these results to the chemical composition of seeds from two commonly utilized wild oat isolines (M73 and SH430). Phenolic acids have been shown to serve as germination inhibitors, as well as protection for seeds from biotic and abiotic stress factors in other species, whereas aliphatic organic acids have been linked to germination traits and protection against pathogens. Wild oat populations were grown under a "common garden" environment to remove maternal variation, and the resulting seeds were extracted to remove the readily soluble and chemically bound phenolic and aliphatic organic acid components. Compounds were identified and quantified using gas chromatography-mass spectrometry. Ferulic and p-coumaric acid comprised 99% of the total phenolic acids present in the seeds, of which 91% were contained in the hulls and 98% were in the chemically bound forms. Smaller quantities of OH benzoic and vanillic acid were also detected. Soluble organic acids concentrations were higher in the M73 isoline compared to SH430, suggesting that these chemical constituents could be related to seed dormancy. Malic, succinic, fumaric and azelaic acid were the dominant aliphatic organic acids detected in all seed and chemical fractions.

  20. Motivos de abandono y no practica de actividad fisicodeportiva en adolescentes espanoles estudio Avena

    OpenAIRE

    Martínez Baena, Alejandro César; Chillón, Palma; Delgado-Fernández, Manuel

    2012-01-01

    A pesar de los reconocidos beneficios físicos, psíquicos y sociales que la práctica de actividad físico-deportiva produce en la salud de los jóvenes, la prevalencia de abandono y falta de este tipo de actividades está mostrando un importante aumento a nivel mundial, particularmente en los países desarrollados. Se precisan actuaciones educativas inmediatas para frenar esta situación. El objetivo del estudio es analizar la expresión de interés hacia la actividad físico-deporti...

  1. Nutrient intake in Spanish adolescents SCOFF high-scorers: the AVENA study.

    Science.gov (United States)

    Estecha Querol, Sara; Fernández Alvira, Juan Miguel; Mesana Graffe, María Isabel; Nova Rebato, Esther; Marcos Sánchez, Ascensión; Moreno Aznar, Luis Alberto

    2016-12-01

    To evaluate whether adolescents with a positive score in a screening tool for possible eating disorders (ED) have a different diet intake in comparison with those with a negative score. Cross-sectional study performed in 235 adolescents (37.9 % boys) from Zaragoza (Spain). Age, gender, BMI, maternal education, nutrient intake (7-day record) and screening tool for detecting ED [sick control on fat food test (SCOFF)] were assessed. ANCOVA test was used to determine nutrient intake differences (namely energy, macronutrients and micronutrients) according to the SCOFF total score (SCOFF ≥2 indicates a possible case of ED). ANCOVA test was adjusted by age, maternal education and BMI. This research was based on data from the cross-sectional multicenter Alimentación y Valoración del Estado Nutricional en Adolescentes españoles (Feeding and Assessment of Nutritional status of Spanish Adolescents) study. The proportion of adolescents with possible symptoms of ED was 21.7 %. Girls SCOFF high-scorers (SCOFF+) mean daily energy intake was significantly lower than in those SCOFF low-scorers (SCOFF-) (P < 0.001); however, in boys there was no difference. Both in girls and boys, there were no statistically significant differences according to SCOFF questionnaire for macronutrient intake, adjusted by daily energy intake. Concerning micronutrients, in girls with SCOFF+ sodium, potassium, phosphorus, iron, zinc, vitamin B 2 and niacin intakes were significantly lower than in those with SCOFF-; however, in boys, there were no differences. Adolescent girls with current possible symptoms of ED presented lower total energy intake and several micronutrients intake compared with their peers without ED.

  2. Annual predictions of the peak numbers of Sitobion avenae infesting winter wheat

    Czech Academy of Sciences Publication Activity Database

    Honěk, A.; Martinková, Z.; Dixon, Anthony F. G.; Saska, P.

    2017-01-01

    Roč. 141, č. 5 (2017), s. 352-362 ISSN 0931-2048 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073 Institutional support: RVO:86652079 Keywords : metopolophium-dirhodum wlk * cereal aphid populations * rhopalosiphum-padi l * english grain aphid * field populations * growth-stages * fixed levels * yield loss * homoptera * dynamics * abundance * ears * growth * leaves * maximum * population Subject RIV: EH - Ecology, Behaviour OBOR OECD: Biodiversity conservation Impact factor: 1.641, year: 2016

  3. Desarrollo y caracterización de una nueva bebida de avena

    OpenAIRE

    Rojas González, Patricia

    2012-01-01

    En los últimos años han aumentado las enfermedades relacionadas con el tabaquismo, el estilo de vida sedentario, dietas altamente energéticas o no equilibradas. El sector de las bebidas es uno de los más preocupados por las necesidades del consumidor y por la búsqueda de nuevos mercados. Esto unido al aumento del consumo de alimentos funcionales hace pensar en una bebida como alimento para mejorar la dieta. Los extractos vegetales se están utilizando actualmente como alternativa los productos...

  4. Biochemical changes in black oat (avena strigosa schreb) cultivated in vineyard soils contaminated with copper.

    Science.gov (United States)

    Girotto, Eduardo; Ceretta, Carlos A; Rossato, Liana V; Farias, Julia G; Brunetto, Gustavo; Miotto, Alcione; Tiecher, Tadeu L; de Conti, Lessandro; Lourenzi, Cledimar R; Schmatz, Roberta; Giachini, Admir; Nicoloso, Fernando T

    2016-06-01

    Soils used for the cultivation of grapes generally have a long history of copper (Cu) based fungicide applications. As a result, these soils can accumulate Cu at levels that are capable of causing toxicity in plants that co-inhabit the vineyards. The aim of the present study was to evaluate growth parameters and oxidative stress in black oat plants grown in vineyard soils contaminated with high levels of Cu. Soil samples were collected from the Serra Gaúcha and Campanha Gaúcha regions, which are the main wine producing regions in the state of Rio Grande do Sul, in southern Brazil. Experiments were conducted in a greenhouse in 2009, with soils containing Cu concentrations from 2.2 to 328.7 mg kg(-1). Evaluated parameters included plant root and shoot dry matter, Cu concentration in the plant's tissues, and enzymatic and non-enzymatic biochemical parameters related to oxidative stress in the shoots of plants harvested 15 and 40 days after emergence. The Cu absorbed by plants predominantly accumulated in the roots, with little to no translocation to the shoots. Even so, oat plants showed symptoms of toxicity when grown in soils containing high Cu concentrations. The enzymatic and non-enzymatic antioxidant systems of oat plants were unable to reverse the imposed oxidative stress conditions. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  5. Characterization of Oat (Avena nuda L.) β-Glucan Cryogelation Process by Low-Field NMR.

    Science.gov (United States)

    Wu, Jia; Li, Linlin; Wu, Xiaoyan; Dai, Qiaoling; Zhang, Ru; Zhang, Yi

    2016-01-13

    Low-field nuclear magnetic resonance (LF-NMR) is a useful method in studying the water distribution and mobility in heterogeneous systems. This technique was used to characterize water in an oat β-glucan aqueous system during cryogelation by repeated freeze-thaw treatments. The results indicated that microphase separation occurred during cryogelation, and three water components were determined in the cryostructure. The spin-spin relaxation time was analyzed on the basis of chemical exchange and diffusion exchange theory. The location of each water component was identified in the porous microstructure of the cryogel. The pore size measured from the SEM image is in accordance with that estimated from relaxation time. The formation of cryogel is confirmed by rheological method. The results suggested that the cryogelation process of the polysaccharide could be monitored by LF-NMR through the evolution of spin-spin relaxation characteristics.

  6. Oats (Avena strigosa) as winter forage for dairy cows in Vietnam: an on-farm study.

    Science.gov (United States)

    Salgado, Paulo; Thang, Vu Q; Thu, Tran V; Trach, Nguyen X; Cuong, Vu C; Lecomte, Philippe; Richard, Didier

    2013-02-01

    In North Vietnam, during winter, alternative forage resources are needed to balance the feed ration of dairy cows. The objective of this study was to investigate the effect of oat forage as a component of traditional winter roughage diets on feed intake, milk production and feeding cost in dairy cows. The study was conducted on-farm using 24 mid-lactation Holstein-Friesian cows. The feeding experiment consisted of two successive periods and two dietary treatments per period. Traditional basal diets included fresh tropical grasses, maize silage and hay. The oat forage had no effect on the dry matter intake of the basal diet, but the total crude protein intake was higher in cows fed with oat diets than in those fed with control diets. The yield of butterfat-corrected milk (FCM) was not significantly different between diets during period 1, but there was a trend (P = 0.078) of higher FCM yields in cows fed with the oat diet compared to those with control diet during period 2 (17.3 vs. 16.3 kg/day). The decline rate in milk yield was significantly higher (P < 0.001) in cows fed with control diets than in those fed with oat diets in both experimental periods. The total feeding cost of cows fed with oat diets was on average 12 % lower than those fed with control diets (P < 0.01). So, the oat forage is an important winter resource for cows in North Vietnam allowing higher milk yield whilst reducing feeding cost, compared to traditional roughage diets.

  7. Gravitropic responses of the Avena coleoptile in space and on clinostats. II. Is reciprocity valid?

    Science.gov (United States)

    Johnsson, A.; Brown, A. H.; Chapman, D. K.; Heathcote, D.; Karlsson, C.

    1995-01-01

    Experiments were undertaken to determine if the reciprocity rule is valid for gravitropic responses of oat coleoptiles in the acceleration region below 1 g. The rule predicts that the gravitropic response should be proportional to the product of the applied acceleration and the stimulation time. Seedlings were cultivated on 1 g centrifuges and transferred to test centrifuges to apply a transverse g-stimulation. Since responses occurred in microgravity, the uncertainties about the validity of clinostat simulation of weightlessness was avoided. Plants at two stages of coleoptile development were tested. Plant responses were obtained using time-lapse video recordings that were analyzed after the flight. Stimulus intensities and durations were varied and ranged from 0.1 to 1.0 g and from 2 to 130 min, respectively. For threshold g-doses the reciprocity rule was obeyed. The threshold dose was of the order of 55 g s and 120 g s, respectively, for two groups of plants investigated. Reciprocity was studied also at bending responses which are from just above the detectable level to about 10 degrees. The validity of the rule could not be confirmed for higher g-doses, chiefly because the data were more variable. It was investigated whether the uniformity of the overall response data increased when the gravitropic dose was defined as (gm x t) with m-values different from unity. This was not the case and the reciprocity concept is, therefore, valid also in the hypogravity region. The concept of gravitropic dose, the product of the transverse acceleration and the stimulation time, is also well-defined in the acceleration region studied. With the same hardware, tests were done on earth where responses occurred on clinostats. The results did not contradict the reciprocity rule but scatter in the data was large.

  8. Helminth communities of wood mouse (Apodemus sylvaticus) on the River Avena (Calabria, Southern Italy)

    Czech Academy of Sciences Publication Activity Database

    Milazzo, C.; Di Bella, C.; Casanova, J. C.; Ribas, Alexis; Cagnin, M.

    2010-01-01

    Roč. 21, č. 2 (2010), s. 171-176 ISSN 0394-1914 Institutional research plan: CEZ:AV0Z60930519 Keywords : endoparasites * rodents * fiumara * Southern Italy Subject RIV: EG - Zoology Impact factor: 0.308, year: 2010

  9. Avenin diversity analysis of the genus Avena (oat). Relevance for people with celiac disease

    NARCIS (Netherlands)

    Londono, D.M.; Westende, van 't W.P.C.; Goryunova, S.V.; Salentijn, E.M.J.; Broeck, van den H.C.; Meer, van der I.M.; Visser, R.G.F.; Gilissen, L.J.W.J.; Smulders, M.J.M.

    2013-01-01

    Oat is widely consumed by people with celiac disease (CD). Its safety has been disputed because two peptides from oat avenins can be recognized as T cell epitopes by some CD patients. Differential signals of gluten-specific monoclonal antibodies and in-vitro T cells to oat varieties have suggested

  10. Effects of seeding rates on forage yield and quality of oat ( Avena ...

    African Journals Online (AJOL)

    Forage availability and quality during the dry and cool season is a major constraint to dairy development in the Highlands of Madagascar. The objective of the present study was to determine optimal seeding of oat and common vetch mixtures for increased production and quality of forage. The study was conducted under ...

  11. Effect of species and harvest maturity on the fatty acids profile of tropical forages

    NARCIS (Netherlands)

    Khan, N.A.; Farooq, M.W.; Ali, M.; Suleman, M.; Ahmad, N.; Sulaiman, S.M.; Cone, J.W.; Hendriks, W.H.

    2015-01-01

    The aim of this study was to quantify the fatty acid (FA) content and composition of forages commonly fed to dairy animals in the tropics. Twelve forage species, namely, Trifolium alexandrinum, Cichorium intybus, Hordeum vulgare L., Medicago sativa, Avena sativa, Pennisetum purpureum Setaria anceps,

  12. Author Details

    African Journals Online (AJOL)

    Acici, M. Vol 47, No 5 (2017) - Articles Effects of various inulin levels on in vitro digestibility of corn silage, perennial ryegrass (Lolium perenne L.) and common vetch (Vicia sativa L.)/oat (Avena sativa L.) hay. Abstract PDF. ISSN: 2221-4062. AJOL African Journals Online. HOW TO USE AJOL... for Researchers · for Librarians ...

  13. A comparison of pasture and fodder crops for the production of ...

    African Journals Online (AJOL)

    Avena sativa and Vicia dasycarpa pasture mixture and maize crop residues under rainfed conditions and Medicago sativa and Digitaria eriantha hay for the winter months. The spring pastures were L. multiflorum cv. Midmar, Lolium perenne cv. Nui and Dactylis glomerata cv. Hera under irrigation, while the summer pastures ...

  14. The effect of thermo-ammoniation on the nutritive value of maize ...

    African Journals Online (AJOL)

    0110 Republic of South Africa. The chemical composition and in vitro dry matter digestibility of a number of forages, namely lucerne (Medicago sativa), Italian rye grass (Lolium multiflorum), triticale (Triticale hexaploide), oats (Avena sativa), tall fescue (Festu£a arundinacea), babala. (Pennisetum typhoides), forage sorghum.

  15. Author Details

    African Journals Online (AJOL)

    Rahetlah, V.B. Vol 10, No 10 (2010) - Articles Effects of seeding rates on forage yield and quality of oat (Avena sativa l.) vetch (Vicia sativa l.) mixtures under irrigated conditions of Madagascar Abstract PDF. ISSN: 1684-5374. AJOL African Journals Online. HOW TO USE AJOL... for Researchers · for Librarians · for Authors ...

  16. Author Details

    African Journals Online (AJOL)

    Selcuk, Z. Vol 47, No 5 (2017) - Articles Effects of various inulin levels on in vitro digestibility of corn silage, perennial ryegrass (Lolium perenne L.) and common vetch (Vicia sativa L.)/oat (Avena sativa L.) hay. Abstract PDF. ISSN: 2221-4062. AJOL African Journals Online. HOW TO USE AJOL... for Researchers · for ...

  17. Cannabis sativa

    Science.gov (United States)

    Yang, Yi; Lewis, Melissa M; Bello, Angelica M; Wasilewski, Ewa; Clarke, Hance A; Kotra, Lakshmi P

    2017-01-01

    Introduction: Cannabis sativa (hemp) seeds are popular for their high nutrient content, and strict regulations are in place to limit the amount of potentially harmful phytocannabinoids, especially Δ 9 -tetrahydrocannabinol (Δ 9 -THC). In Canada, this limit is 10 μg of Δ 9 -THC per gram of hemp seeds (10 ppm), and other jurisdictions in the world follow similar guidelines. Materials and Methods: We investigated three different brands of consumer-grade hemp seeds using four different procedures to extract phytocannabinoids, and quantified total Δ 9 -THC and cannabidiol (CBD). Discussion: We discovered that Δ 9 -THC concentrations in these hemp seeds could be as high as 1250% of the legal limit, and the amount of phytocannabinoids depended on the extraction procedure employed, Soxhlet extraction being the most efficient across all three brands of seeds. Δ 9 -THC and CBD exhibited significant variations in their estimated concentrations even from the same brand, reflecting the inhomogeneous nature of seeds and variability due to the extraction method, but almost in all cases, Δ 9 -THC concentrations were higher than the legal limit. These quantities of total Δ 9 -THC may reach as high as 3.8 mg per gram of hemp seeds, if one were consuming a 30-g daily recommended amount of hemp seeds, and is a cause for concern for potential toxicity. It is not clear if these high quantities of Δ 9 -THC are due to contamination of the seeds, or any other reason. Conclusion: Careful consideration of the extraction method is very important for the measurement of cannabinoids in hemp seeds.

  18. Assessment of the Phytotoxicity of Soils on Main Streets of Voronezh City

    Science.gov (United States)

    Voronin, A. A.; Klevtsova, M. A.; Lepeshkina, L. A.; Mikheev, A. A.; Yeprintsev, S. A.

    2017-05-01

    This research looks at the results of a study assessment of phytotoxicity soils of the main streets of the city Voronezh. The experiments were performed under ecologo-analitic laboratory Voronezh State University conditions over a 21-day evaluation period. The phytotoxic effect germination was analyzed on Avena sativa L. seeds, germination energy, morphological parameters of seedlings, and plant biomass. The research soil samples had both an inhibitory and stimulating effect on the growth of the above-ground part of the seedlings and roots Avena sativa. The sections of main streets with increased phytotoxicity soils were revealed. It is recommended to carry out measures to reduce the phytotoxicity of urban soils.

  19. Possible role of volatile Fatty acids and abscisic Acid in the dormancy of oats.

    Science.gov (United States)

    Berrie, A M

    1979-04-01

    Species of Avena differ markedly in their levels of pre- and post-harvest dormancy. These species offer the opportunity of determining if dormancy is related to the endogenous level of growth inhibitor. Germinability in two species of differing levels of dormancy, common oat Avena sativa L., and wild oat Avena fatua L. was assessed as were the contents of abscisic acid and volatile fatty acids of chain length C(6)-C(10). In A. sativa which did not possess postharvest dormancy there was no correlation between germination and inhibitor levels but in A. fatua the relationship between the content of fatty acid and dormancy was good. The loss of these fatty acids in dry storage by evaporation could explain after ripening.

  20. Implications of Environmental Stress during Seed Development on Reproductive and Seed Bank Persistence Traits in Wild Oat (Avena fatua L.)

    OpenAIRE

    Gallagher, Robert; Granger, Kristen; Snyder, Amanda; Pittmann, Dennis; Fuerst, E.

    2013-01-01

    Weeds produce seed under a wide range of conditions, depending on timing of emergence, prevailing crop, soil microsites, and climatic conditions, among other factors. We hypothesized that the maturation environment during weed seed development will influence reproductive allocation and seed persistence traits, such as seed dormancy and vigor, and needs to be considered when formulating weed management strategies. This research evaluated the effects of shade and drought stress on reproductive ...

  1. A comparative study between nonlinear regression and artificial neural network approaches for modelling wild oat (Avena fatua) field emergence

    Science.gov (United States)

    Non-linear regression techniques are used widely to fit weed field emergence patterns to soil microclimatic indices using S-type functions. Artificial neural networks present interesting and alternative features for such modeling purposes. In this work, a univariate hydrothermal-time based Weibull m...

  2. [Increase in cigarette smoking and decrease in the level of physical activity among Spanish adolescentes. AVENA study].

    Science.gov (United States)

    Tercedor, P; Martín-Matillas, M; Chillón, P; Pérez López, I J; Ortega, F B; Wärnberg, J; Ruiz, J R; Delgado, M

    2007-01-01

    Cigarette smoking among adolescents as well as the level of physical activity constitutes a public health care issue. The aim is knowing the relationship between cigarette smoking and practice of physical activity. Schooled Spanish adolescents 2859 Spanish adolescents (1357 boys, 1502 girls; age range: 13-18.5 years). A questionnaire is applied to know the level of cigarette smoking and four other questionnaires to know the level of physical activity during different periods. 40.8% of the adolescents stated not doing any physical activity at all, boys being more active than girls (p < 0.001). 29.9% of the adolescents stated usually smoking cigarettes, without differences by gender. Both active boys and girls stated smoking less (P < or = 0.01). The greater the age, the higher cigarette smoking and the lower the level of physical activity, both in boys and girls (p < 0.001). The level of physical activity is low, being even lower for girls. Cigarette smoking shows a negative relationship with the level of physical activity, the individuals more physically active being those smoking the less.

  3. Motivos de pr??ctica de actividad f??sico-deportiva en adolescentes espa??oles: estudio AVENA

    OpenAIRE

    Mart??nez-Baena, Alejandro C??sar; Chill??n, Palma; Mart??n-Matillas, Miguel; P??rez L??pez, Isaac Jos??; Castillo, Ruth; Zapatera, Bel??n; Vicente-Rodr??guez, Germ??n; Casaj??s, Jos?? Antonio; ??lvarez-Granda, Lino; Romero Cerezo, Cipriano; Tercedor S??nchez, Pablo; Delgado Fern??ndez, Manuel

    2012-01-01

    Fundamentos: La pr??ctica de actividad f??sico-deportiva es un medio ideal para la obtenci??n de beneficios bio-psico-sociales en la salud de los j??venes. El objetivo del estudio fue conocer los motivos de pr??ctica de actividad f??sico-deportiva en una muestra representativa de adolescentes espa??oles. M??todos: Se efectu?? un estudio descriptivo de corte transversal y se emple?? la encuesta sobre comportamientos, actitudes y valores sobre actividad f??sica y deportiva del G...

  4. Bacterial symbionts, Buchnera, and starvation on wing dimorphism in English grain aphid, Sitobion avenae (F.) (Homoptera: Aphididae)

    Science.gov (United States)

    Wing dimorphism in aphids can be affected by multiple cues including both biotic (nutrition, crowding, interspecific interactions, the presence of natural enemies, maternal and transgenerational effects, and alarm pheromone) and abiotic factors (temperature, humidity, and photoperiod). Virtually al...

  5. Growth of Avena Coleoptiles and pH Drop of Protoplast Suspensions Induced by Chlorinated Indoleacetic Acids

    DEFF Research Database (Denmark)

    Engvild, Kjeld Christensen; Doll, Hans; Böttger, M.

    1978-01-01

    acid, 2,4-dichlorphenoxyacetic acid and naphthaleneacetic acid. 5-Chloro- and 6-chloroindoleacetic acids are very strong auxins as well. Other derivatives tested have a lower activity. 5,7-Dichloro- and 5-hydroxyindoleacetic acids have very low auxin activity at 10-4 mol l-1 and may be anti-auxins...

  6. Rhizodeposition of nitrogen and carbon by mungbean (Vigna radiata L.) and its contribution to intercropped oats (Avena nuda L.).

    Science.gov (United States)

    Zang, Huadong; Yang, Xuechao; Feng, Xiaomin; Qian, Xin; Hu, Yuegao; Ren, Changzhong; Zeng, Zhaohai

    2015-01-01

    Compounds released by mungbean roots potentially represent an enormous source of nitrogen (N) and carbon (C) in mungbean-oat intercropping systems. In this study, an in situ experiment was conducted using a 15N - 13C double stem-feeding method to measure N and C derived from the rhizodeposition (NdfR and CdfR) of mungbean and their transfer to oats in an intercropping system. Mungbean plants were sole cropped (S) or intercropped (I) with oat. The plants were labeled 5 weeks after planting and were harvested at the beginning of pod setting (Ip and Sp) and at maturity (Im and Sm). More than 60% and 50% of the applied 15N and 13C, respectively, were recovered in each treatment, with 15N and 13C being quite uniformly distributed in the different plant parts. NdfR represented 9.8% (Sp), 9.2% (Ip), 20.1% (Sm), and 21.2% (Im) of total mungbean plant N, whereas CdfR represented 13.3% (Sp), 42.0% (Ip), 15.4% (Sm), and 22.6% (Im) of total mungbean plant C. When considering the part of rhizodeposition transferred to associated oat, intercropping mungbean released more NdfR and CdfR than mungbean alone. About 53.4-83.2% of below-ground plant N (BGP-N) and 58.4-85.9% of BGP-C originated from NdfR and CdfR, respectively. The N in oats derived from mungbean increased from 7.6% at the pod setting stage to 9.7% at maturity, whereas the C in oats increased from 16.2% to 22.0%, respectively. Only a small percentage of rhizodeposition from mungbean was transferred to oats in the intercropping systems, with a large percentage remaining in the soil. This result indicates that mungbean rhizodeposition might contribute to higher N and C availability in the soil for subsequent crops.

  7. Dynamic changes in gamma-aminobutyric acid and glutamate decarboxylase activity in oats (Avena nuda L.) during steeping and germination.

    Science.gov (United States)

    Xu, Jian Guo; Hu, Qing Ping; Duan, Jiang Lian; Tian, Cheng Rui

    2010-09-08

    Gamma-aminobutyric acid (GABA) is the principal inhibitory neurotransmitter in the central nervous system and provides beneficial effects for human and other animals health. To accumulate GABA, samples from two different naked oat cultivars, Baiyan II and Bayou I, were steeped and germinated in an incubator. The content of GABA and glutamic acid as well as the activity of the glutamate decarboxylase (GAD) in oats during steeping and germination were investigated with an amino acid automatic analyzer. Compared with raw groats, an increase in GABA content of oat groats during steeping and germination was continuously observed for two oat cultivars. The activity of GAD increased greatly at the end of steeping and the second stage of germination for Baiyan II and Bayou I, respectively. Glutamic acid content of treated oat groats was significantly lower than that in raw groats until the later period of germination. GABA was correlated (p<0.01) significantly and positively with the glutamic acid rather than GAD activity in the current study. The results indicates that steeping and germination process under highly controlled conditions can effectively accumulate the GABA in oat groats for Baiyan II and Bayou I, which would greatly facilitate production of nutraceuticals or food ingredients that enable consumers to gain greater access to the health benefits of oats. However, more assays need to be further performed with more oat cultivars.

  8. Occurrence and parasitism of aphids (Hemiptera: Aphididae on cultivars of irrigated oat (Avena spp. in São Carlos, Brazil

    Directory of Open Access Journals (Sweden)

    Júlio Cesar Ronquim

    2004-06-01

    Full Text Available The interactions between aphids and their Hymenopteran parasitoids on irrigated oats as well as the response of different cultivars of cereals regarding the resistance to these aphids and the influence on the host/parasitoid relationships were studied during two years in São Carlos, Brazil. Rhopalosiphum padi (L. was the predominant aphid observed throughout the study, while the other species were rarely found. Five species of parasitic Hymenoptera were found: three primary parasitoids, Lysiphlebus testaceipes (Cresson, Aphidius colemani (Viereck and Diaeretiella rapae (M'Intosh and two hyperparasitoids, Syrphophagus aphidivorus (Myer and Alloxysta brassicae (Ashmead. The UPF 86081 cultivar presented significant results regarding lower Rhopalosiphum padi contamination and higher aphid parasitism rates than those observed on some other cultivars. No significant effect on the percentage variation of parasitoid emergence on the mummified aphids was observed throughout this study.Foram avaliadas as interações entre afídeos e seus himenópteros parasitóides em cultivares de aveia irrigada, como também a resposta de diferentes cultivares em relação resistência à estes afídeos e a influência nas relações hospedeiro/parasitóide durante dois anos em São Carlos, SP, Brasil. Rhopalosiphum padi (L. foi o afídeo predominante ao longo do estudo, enquanto as outras espécies raramente foram encontradas. Foram observadas cinco espécies de himenópteros parasitóides: três parasitóides primários, Lysiphlebus testaceipes (Cresson, Aphidius colemani (Viereck e Diaeretiella rapae (M'Intosh e dois hiperparasitóides, Syrphophagus aphidivorus (Myer and Alloxysta brassicae (Ashmead. A cultivar UPF 86081 apresentou resultados significativos quanto à baixa infestação por Rhopalosiphum padi e maiores taxas de parasitismo que a demais cultivares. Não foi observado efeito significativo na variação de porcentagem de emergência de parasitóides nos afídeos mumificados ao longo deste estudo.

  9. COSTOS SOBRE LA ADECUACION BIOLOGICA EN LA INTERACCION INSECTO-PLANTA: POTENCIALIDADES Y RESTRICCIONES A LA EVOLUCION EN SITOBION AVENAE

    OpenAIRE

    CASTAÑEDA SEPULVEDA ; LUIS EDUARDO; CASTAÑEDA SEPULVEDA ; LUIS EDUARDO

    2008-01-01

    La Interacción insecto-planta está caracteriza por una "carrera armamentista" que involucra una serie de barreras desarrolladas por las plantas para evitar la herbivoría, y a su vez diversos mecanismos desarrollados por los insectos para enfrentar y sobrepasar las barreas vegetales. Dentro de las diversas defensas que poseen las plantas, se encuentra los metabolitos secundarios que provocan efectos tóxicos en los insectos que consumen plantas químicamente defendidas. A su vez, los insectos ha...

  10. Isolate specificity and polygenic inheritance of resistance in barley to the heterologous rust pathogen Puccinia graminis f. sp. avenae

    NARCIS (Netherlands)

    Dracatos, P.M.; Nansamba, M.; Berlin, A.; Park, R.F.; Niks, R.E.

    2016-01-01

    Barley is a near-nonhost to numerous heterologous (nonadapted) rust pathogens because a small proportion of genotypes are somewhat susceptible. We assessed 66 barley accessions and three mapping populations (Vada x SusPtrit, Cebada Capa x SusPtrit, and SusPtrit x Golden Promise) for response to

  11. Improving ecological risk assessment by including bioavailability into species sensitivity distributions: an example for plants exposed to nickel in soil

    NARCIS (Netherlands)

    Semenzin, E.; Temminghoff, E.J.M.; Marcomini, A.

    2007-01-01

    The variability of species sensitivity distribution (SSD) due to contaminant bioavailability in soil was explored by using nickel as metal of concern. SSDs of toxicity test results of Avena sativa L. originating from different soils and expressed as total content and available (0.01 M CaCl2)

  12. Effects of mowing utilization on forage yield and quality in five oat ...

    African Journals Online (AJOL)

    Oat (Avena sativa) is grown to provide feed in winter for livestock production in the alpine area of Qinghai-Tibetan Plateau. The effect of early cutting (T1), late cutting (T2) as well as once cutting and twice cutting (T3) on forage yields and qualities were investigated for five oat varieties (YTA, CNC, B3, Q473 and Q444).

  13. Inter-simple sequence repeat (ISSR) loci mapping in the genome of perennial ryegrass

    DEFF Research Database (Denmark)

    Pivorienė, O; Pašakinskienė, I; Brazauskas, G

    2008-01-01

    regions of known sequences within the current DNA databases. An ISSR fragment of 580 bp, produced by the (GACA)4TC primer present on LG6, showed a 95% identity to the Avena sativa L. transposon and repetitive DNA linked to the receptor kinase gene. A 780 bp fragment generated by (TG)8RT primer...

  14. Tanzania Journal of Science - Vol 27, No 1 (2001)

    African Journals Online (AJOL)

    Test of the Additive-Dominance Model of grain weight and grain uniformity of oat, Avena sativa L, genotypes. EMAIL FREE FULL TEXT EMAIL FREE FULL TEXT · DOWNLOAD FULL TEXT DOWNLOAD FULL TEXT. SOWM Reuben, 121-134. http://dx.doi.org/10.4314/tjs.v27i1.18341 ...

  15. Short Communication: A preliminary evaluation of annual ...

    African Journals Online (AJOL)

    Keywords: above-ground phytomass; adg; afrikaans; animal production; availability; avena sativa; average daily gain; continuous grazing; daily gain; dryland; eastern cape; food availability; grazing; lambs; oats; pastures; phytomass; production; production potential; sourveld; south africa; stocking rate; stocking rates; vicia ...

  16. Research Note Tebuthiuron residues remain active in soil for at least ...

    African Journals Online (AJOL)

    This study investigated patterns of emergence and survival of monocotyledonous oats (Avena sativa) and dicotyledonous cabbage (Brassica oleracea) in soils collected from bare patches resulting from the application of tebuthiuron between two and eight years earlier. Untreated soils provided a control. Both oats and ...

  17. Evaluating oat cultivars for dairy forage production in the central ...

    African Journals Online (AJOL)

    The two most preferred cultivars by the farmers were Conway and Glamis. Based on DM and CP production, and farmers' choice, we conclude that Conway and Glamis stand a high chance of improving forage production in the area and other similar systems. Keywords: agronomy, Avena sativa, forage quality, livestock ...

  18. A preliminary survey of viruses in pasture grasses in South Africa ...

    African Journals Online (AJOL)

    Serological tests indicate that Avena sativa from Roodeplaat and Bromus unioloides from Potchefstroom, Cedara and Nooitgedacht are positive for maize dwarf mosaic virus (MDMV). Lolium multiflorum from Cedara appears to be infected with two viruses, brome mosaic virus(BMV) and a potyvirus-like agent, possibly ...

  19. Effect of diet anil physiological state on recycling of urea in Merino ...

    African Journals Online (AJOL)

    portion of urea entry recycled in dry (non-pregnant), preg- nant and lactating Merino ewes eating diets designed to be representative of those likely to be encountered while grazing. Materials and Methods. Merino ewes, 5 years old, were housed indoors and fed either chaffed oaten hay (Avena sativa, OH); chaffed iucerne.

  20. Grass-clover undersowing affects nitrogen dynamics in a grain legume–cereal arable cropping system

    DEFF Research Database (Denmark)

    Hauggaard-Nielsen, Henrik; Mundus, Simon; Jensen, Erik Steen

    2012-01-01

    A field experiment was carried out in an arable organic cropping system and included a sequence with sole cropped fababean (Vicia faba L.), lupin (Lupinus angustifolius L.), pea (Pisum sativum L.), oat (Avena sativa L.) and pea–oat intercropping with or without an undersown perennial ryegrass...

  1. Genetic analysis on the competitive ability of barley ( Hordeum ...

    African Journals Online (AJOL)

    Genetic analysis on the competitive ability of barley ( Hordeum vulgare L.) recombinant inbred lines intercropped with oat ( Avena sativa L.) weeds. ... Furthermore, the commonly used herbicide price is soaring from time to time and out of the reach of the poor farmers in the developing countries. Therefore, this method is an ...

  2. Variety effect on composition, kinetics of fermentation and in vitro ...

    African Journals Online (AJOL)

    Yield, chemical composition, in vitro digestibility and kinetics of fermentation of straw from 18 varieties of oats (Avena sativa L.) were studied. All the straw varieties were grown in three replicates under the same agronomic conditions. Significance differences were observed in the yield of straw (4.4 to 7.5 ton dry matter ...

  3. Vulnerability of grain crops and croplands in the Midwest to climatic variability and adaptation strategies

    Science.gov (United States)

    Maize (Zea mays L.) and soybean (Gylcine max (L.) Merr.) are the dominant grain crops across the Midwest and are grown on 75% of the arable land with wheat (Triticum aestivum L.) and oats (Avena sativa L.) small but economically important crops. Historically there have been variations in annual yiel...

  4. Assessment of the nutritive value of cereal and legume straws based on chemical composition and in vitro digestibility

    NARCIS (Netherlands)

    Lopez, S.; Davies, D.; Dhanoa, M.S.; Dijkstra, J.; France, J.

    2005-01-01

    The nutritive value of 17 straws was determined on the basis of their chemical composition, in vitro dry matter (DM) digestibility and rumen fermentation kinetics (from gas production curves measured in vitro). Five roughages were from the cereal species Avena sativa (oat), Hordeum vulgare (barley),

  5. Subgenome-specific assembly of vitamin E biosynthesis genes and expression patterns during seed development provide insight into the evolution of the oat genome

    Science.gov (United States)

    Vitamin E is essential for humans and thus must be a component of a healthy diet. Among the cereal grains, hexaploid oats (Avena sativa L.) have high vitamin E content. To date, no gene sequences in the vitamin E biosynthesis pathway have been reported for oats. Using deep sequencing and orthology-g...

  6. Assembly and expression analysis of oat vitamin E biosynthesis gene homeologs during seed development

    Science.gov (United States)

    Among the cereal grains, hexaploid oats (Avena sativa L.) are particularly rich in vitamin E, an essential liposoluble vitamin that maintains membrane stability and possesses antioxidant and anti-inflammatory properties. To date, no gene sequences involved in vitamin E biosynthesis have been reporte...

  7. Feasibility of winter cover crop production under rainfed conditions ...

    African Journals Online (AJOL)

    Low winter rainfall poses a challenge to production of high biomass from cover crops, which is necessary for the success of conservation agriculture systems in the Eastern Cape Province of South Africa. An experiment was conducted to evaluate the adaptability of white oats (Avena sativa), grazing vetch (Vicia dasycarpa), ...

  8. 2018-03-13T08:12:57Z https://www.ajol.info/index.php/all/oai oai:ojs ...

    African Journals Online (AJOL)

    Acidovorax avenae subsp. avenae ainsi que Xanthomonas oryzae pv. oryzae ont été chacune détectées dans 50 % des échantillons et Burkholderia Glumae dans 16,66 %. 52 % des bactéries identifiées se rapportent à Acidovorax avenae subsp. avenae, 35 % à Xanthomonas oryzae pv. oryzae et 13 % à Burkholderia ...

  9. "Navajita Cecilia" Bouteloua gracilis H.B.K (Lag.. Nueva variedad de pasto para zonas áridas y semiáridas

    Directory of Open Access Journals (Sweden)

    Sergio Beltrán López

    2010-01-01

    fertilización nitrogenada. Los resultados muestran que el uso combinado de inoculante más 30 kg N ha-1 produjo 50 % más MS (aproximadamente 11 t más que cuando se aplica sólo nitrógeno, especialmente en avena y ballico anual. El análisis económico mostró que el mejor tratamiento fue el de inoculación con 30 kg N ha-1 en Avena sativa L, con una tasa de retorno marginal por arriba del 60 %.

  10. BIODEGRADACIÓN DE QUEROSENO EN LA RIZÓSFERA DE GRAMÍNEAS EN CONDICIONES DE INVERNADERO

    OpenAIRE

    Elizabeth García; Ronald Ferrera; Juan José Almaráz; Refugio Rodríguez; Edelmira García

    2013-01-01

    El queroseno afecta de manera negativa la actividad biológica del suelo, así como el crecimiento y desarrollo de las plantas. Para analizar lo anterior, se evaluó este contaminante en avena (Avena sativa), cebada (Hordeum vulgare), pasto (Chloris gayana) y trigo (Triticum aestivum), en las poblaciones microbianas de la rizósfera y el rizoplano, así como el porcentaje de degradación del contaminante en suelo rizosférico. Se empleó un diseño experimental completamente al azar con un arreglo fac...

  11. Medicago sativa spp. falcata

    African Journals Online (AJOL)

    STORAGESEVER

    2009-05-18

    May 18, 2009 ... Falcata (Medicago sativa spp. falcata L.), with its high resistance to cold weather, drought and disease, .... 40 plants. Seeds were grown in a greenhouse and seedlings were transplanted three months later to the experiment station in Hebei province ..... latitude range (from northern latitude 29° to northern.

  12. Oryza sativa L.

    Indian Academy of Sciences (India)

    Molecular evaluation of genetic diversity and association studies in rice. (Oryza sativa L.) C. Vanniarajan, K. K. Vinod and Andy Pereira. J. Genet. 91, 9–19. Table 1. Chromosome-wise distribution of SSR alleles and their number (k), polymorphic information content (PIC) and allele discrimination index (Dm). Chromosome.

  13. Lactuca sativa L.

    African Journals Online (AJOL)

    Jane

    2011-10-24

    Oct 24, 2011 ... Seeds of four lettuce (Lactuca sativa L.) genotypes viz., Great Lakes (GL), Paris Island cos, Kagraner. Sommer (KS) and Isadora were assessed for their response to salt at the germination and seedling stages. The germination rate of the four varieties was comparatively studied under 0, 50, 100, 150 and.

  14. Exploring the origin of the D genome of oat by fluorescence in situ hybridization.

    Science.gov (United States)

    Luo, Xiaomei; Zhang, Haiqin; Kang, Houyang; Fan, Xing; Wang, Yi; Sha, Lina; Zhou, Yonghong

    2014-09-01

    Further understanding of the origin of cultivated oat would accelerate its genetic improvement. In particular, it would be useful to clarify which diploid progenitor contributed the D genome of this allohexaploid species. In this study, we demonstrate that the landmarks produced by fluorescence in situ hybridization (FISH) of species of Avena using probes derived from Avena sativa can be used to explore the origin of the D genome. Selected sets of probes were hybridized in several sequential experiments performed on exactly the same chromosome spreads, with multiple probes of cytological preparations. Probes pITS and A3-19 showed there might be a similar distribution of pITS between the Ac and D genomes. These results indicated that the Ac genome is closely related to the D genome, and that Avena canariensis (AcAc) could be the D-genome donor of cultivated oat.

  15. In situ Rumen Degradation Kinetics of High-Protein Forage Crops in Temperate Climates Cinética de Degradación Ruminal in situ en Forrajes de Alto Contenido Proteico en Clima Templado

    OpenAIRE

    Ximena Valderrama L.; René Anrique G.

    2011-01-01

    The present study was conducted to evaluate the nutritional value and in situ degradation kinetics of eight high protein forage crops: alfalfa (Medicago sativa L.), forage oat (Avena sativa L.), mixed pasture, and ryegrass (Lolium multiflorum Lam.) pasture in early vegetative stages, two forage lupins (Lupinus albus L.) in early bloom stages, sugar beet (Beta vulgaris L.) and kale (Brassica napus var. pabularia (DC.) Rchb.) leaves at root maturity. Dry matter (DM) and crude protein (CP) degra...

  16. (Vicia sativa L.) - triticale

    African Journals Online (AJOL)

    STORAGESEVER

    2009-10-19

    Oct 19, 2009 ... vetch (Vicia sativa L.) - triticale (Triticosecale Wittm.) mixtures under east mediterranean rainfed .... that the grain yield of pea and oats averaged 4.9 t ha-1 in monocultures and 5.5 t ha-1 in mixtures ... The long-term average temperature from November to April in Kozan is 13.0°C and means rainfall 537 mm ...

  17. Alfalfa (Medicago sativa L.).

    Science.gov (United States)

    Fu, Chunxiang; Hernandez, Timothy; Zhou, Chuanen; Wang, Zeng-Yu

    2015-01-01

    Alfalfa (Medicago sativa L.) is a high-quality forage crop widely grown throughout the world. This chapter describes an efficient protocol that allows for the generation of large number of transgenic alfalfa plants by sonication-assisted Agrobacterium-mediated transformation. Binary vectors carrying different selectable marker genes that confer resistance to phosphinothricin (bar), kanamycin (npt II), or hygromycin (hph) were used to generate transgenic alfalfa plants. Intact trifoliates collected from clonally propagated plants in the greenhouse were sterilized with bleach and then inoculated with Agrobacterium strain EHA105. More than 80 % of infected leaf pieces could produce rooted transgenic plants in 4-5 months after Agrobacterium-mediated transformation.

  18. (Nigella sativa L.) genotypes from

    African Journals Online (AJOL)

    ajl yemi

    2011-10-26

    Coriandrum sativum L.) and. Niger (Guizotia abyssinica cass.) oil seeds. Food Chem. 80: 197-204. Ramadan MF, Morsel JT (2002). Characterization of phospholipids composition of black cumin (Nigella sativa). Nahrung/Food, 46: 240-.

  19. Hemp (Cannabis sativa L.).

    Science.gov (United States)

    Feeney, Mistianne; Punja, Zamir K

    2015-01-01

    Hemp (Cannabis sativa L.) suspension culture cells were transformed with Agrobacterium tumefaciens strain EHA101 carrying the binary plasmid pNOV3635. The plasmid contains a phosphomannose isomerase (PMI) selectable marker gene. Cells transformed with PMI are capable of metabolizing the selective agent mannose, whereas cells not expressing the gene are incapable of using the carbon source and will stop growing. Callus masses proliferating on selection medium were screened for PMI expression using a chlorophenol red assay. Genomic DNA was extracted from putatively transformed callus lines, and the presence of the PMI gene was confirmed using PCR and Southern hybridization. Using this method, an average transformation frequency of 31.23% ± 0.14 was obtained for all transformation experiments, with a range of 15.1-55.3%.

  20. Hemp (Cannabis sativa L.).

    Science.gov (United States)

    Feeney, Mistianne; Punja, Zamir K

    2006-01-01

    Hemp (Cannabis sativa L.) suspension culture cells were transformed with Agrobacterium tumefaciens strain EHA101 carrying the binary plasmid pNOV3635. The plasmid contains a phosphomannose isomerase (PMI) selectable marker gene. Cells transformed with PMI are capable of metabolizing the selective agent, mannose, whereas cells not expressing the gene are incapable of using the carbon source and will stop growing. Callus masses proliferating on selection were screened for PMI expression using a chlorophenol red assay. Genomic DNA was extracted from putatively transformed callus lines and the presence of the PMI gene was confirmed using polymerase chain reaction and Southern hybridization. Using this method, an average transformation frequency of 31.23% +/- 0.14 was obtained for all transformation experiments, with a range of 15.1 to 55.3%.

  1. Simultaneous Detection of Three Bacterial Seed-Borne Diseases in Rice Using Multiplex Polymerase Chain Reaction

    OpenAIRE

    Kang, In Jeong; Kang, Mi-Hyung; Noh, Tae-Hwan; Shim, Hyeong Kwon; Shin, Dong Bum; Heu, Suggi

    2016-01-01

    Burkholderia glumae (bacterial grain rot), Xanthomonas oryzae pv. oryzae (bacterial leaf blight), and Acidovorax avenae subsp. avenae (bacterial brown stripe) are major seedborne pathogens of rice. Based on the 16S and 23S rDNA sequences for A. avenae subsp. avenae and B. glumae, and transposase A gene sequence for X. oryzae pv. oryzae, three sets of primers had been designed to produce 402 bp for B. glumae, 490 bp for X. oryzae, and 290 bp for A. avenae subsp. avenae with the 63°C as an opti...

  2. Simultaneous Detection of Three Bacterial Seed-Borne Diseases in Rice Using Multiplex Polymerase Chain Reaction

    Directory of Open Access Journals (Sweden)

    In Jeong Kang

    2016-12-01

    Full Text Available Burkholderia glumae (bacterial grain rot, Xanthomonas oryzae pv. oryzae (bacterial leaf blight, and Acidovorax avenae subsp. avenae (bacterial brown stripe are major seedborne pathogens of rice. Based on the 16S and 23S rDNA sequences for A. avenae subsp. avenae and B. glumae, and transposase A gene sequence for X. oryzae pv. oryzae, three sets of primers had been designed to produce 402 bp for B. glumae, 490 bp for X. oryzae, and 290 bp for A. avenae subsp. avenae with the 63°C as an optimum annealing temperature. Samples collected from naturally infected fields were detected with two bacteria, B. glumae and A. avenae subsp. avenae but X. oryzae pv. oryzae was not detected. This assay can be used to identify pathogens directly from infected seeds, and will be an effective tool for the identification of the three pathogens in rice plants.

  3. Simultaneous Detection of Three Bacterial Seed-Borne Diseases in Rice Using Multiplex Polymerase Chain Reaction.

    Science.gov (United States)

    Kang, In Jeong; Kang, Mi-Hyung; Noh, Tae-Hwan; Shim, Hyeong Kwon; Shin, Dong Bum; Heu, Suggi

    2016-12-01

    Burkholderia glumae (bacterial grain rot), Xanthomonas oryzae pv. oryzae (bacterial leaf blight), and Acidovorax avenae subsp. avenae (bacterial brown stripe) are major seedborne pathogens of rice. Based on the 16S and 23S rDNA sequences for A. avenae subsp. avenae and B. glumae , and transposase A gene sequence for X. oryzae pv. oryzae , three sets of primers had been designed to produce 402 bp for B. glumae , 490 bp for X. oryzae , and 290 bp for A. avenae subsp. avenae with the 63°C as an optimum annealing temperature. Samples collected from naturally infected fields were detected with two bacteria, B. glumae and A. avenae subsp. avenae but X. oryzae pv. oryzae was not detected. This assay can be used to identify pathogens directly from infected seeds, and will be an effective tool for the identification of the three pathogens in rice plants.

  4. 77 FR 18829 - Gastroenterology and Urology Devices Panel of the Medical Devices Advisory Committee; Notice of...

    Science.gov (United States)

    2012-03-28

    ..., MD 20877. The hotel's telephone number is 301-977-8900. Contact Person: Avena Russell, Center for.... 1535, Silver Spring, MD 20993-0002, Avena[email protected] , 301-796-3805, or FDA Advisory Committee...

  5. 77 FR 32125 - Orthopaedic and Rehabilitation Devices Panel of the Medical Devices Advisory Committee; Amendment...

    Science.gov (United States)

    2012-05-31

    .... There are no other changes. FOR FURTHER INFORMATION CONTACT: Avena Russell, Center for Devices and..., MD 20993-0002, 301-796-3805, Avena[email protected] , or please use the FDA Advisory Committee...

  6. 76 FR 71045 - Neurological Devices Panel of the Medical Devices Advisory Committee; Notice of Meeting

    Science.gov (United States)

    2011-11-16

    ... (301) 977-8900. Contact Person: Avena Russell, Center for Devices and Radiological Health, Food and Drug Administration, 10903 New Hampshire Ave., Bldg. 66, Rm. 1535, Silver Spring, MD 20993-0002, Avena...

  7. 76 FR 71983 - Gastroenterology and Urology Devices Panel of the Medical Devices Advisory Committee; Notice of...

    Science.gov (United States)

    2011-11-21

    ... 20877. The hotel's telephone number is (301) 977-8900. Contact Person: Avena Russell, Center for Devices..., Silver Spring, MD 20993-0002, Avena[email protected] , (301) 796-3805, or FDA Advisory Committee...

  8. (Nigella sativa L.) genotypes from

    African Journals Online (AJOL)

    ajl yemi

    2011-10-26

    Oct 26, 2011 ... analysis. Five and six clusters were observed for nutritional characteristics and mineral nutrients respectively. Based on principal component analysis, ...... mechanism (s) for the relaxant effect of aqueous and macerated extracts from Nigella sativa on tracheal chains of guinea pig. BMC Pharmacol, 4: 1-6.

  9. Pharmacology of Marihuana (Cannabis sativa)

    Science.gov (United States)

    Maickel, Roger P.

    1973-01-01

    A detailed discussion of marihuana (Cannabis sativa) providing the modes of use, history, chemistry, and physiologic properties of the drug. Cites research results relating to the pharmacologic effects of marihuana. These effects are categorized into five areas: behavioral, cardiovascular-respiratory, central nervous system, toxicity-toxicology,…

  10. POTENTIAL AND OPPORTUNITIES FOR GROW THE SPRING NAKED OATS VARIETY "MINA" (AVENA NUDA, L. IN THE CONDITIONS OF ORGANIC FARMING IN SAKAR AGRO REGION

    Directory of Open Access Journals (Sweden)

    Violeta Vateva

    2016-12-01

    Full Text Available From all cereals the oats is the culture that due to dietary and healthy impact on the human body becomes more sought after in the market. The residual products of oats after harvesting the grain such as straw and chaff are sought after for animal feed. The aim of this research is to test the potential opportunities of the spring naked oats variety "Mina", Bulgarian selection, grown on the principles of organic farming. The research is carried out in real ecological environment under field conditions of Sakar agro-ecological region. In ecological environment and without using of pesticides and mineral fertilizers the vegetative development of the spring naked oats variety "Mina" passes normally. The duration of the vegetation period ranges from 93 to 115 days. For this period the oats grew by an average of 69.7 cm. Under the ecological conditions of Sakar agro-region average yields of grain are 1292.830 kg/ha, and the quantity of straw is 1515.500 kg/ha. The yields of grain of spring naked oat variety "Mina" grown in ecological conditions are lower compared to the average yields of oats in the country for the same period with 452.50 kg/ha. This difference is not alarming considering the fact that the production of this variety oats is ecological clean and there is market demand for dietetic foods.

  11. Silencing of a lipase maturation factor 2-like gene by wheat-mediated RNAi reduces the survivability and reproductive capacity of the grain aphid, Sitobion avenae.

    Science.gov (United States)

    Xu, Lanjie; Hou, Qiling; Zhao, Yanjie; Lu, Lihua; Li, Baoyun; Ni, Zhongfu; Liang, Rongqi

    2017-07-01

    Lipase maturation factor (LMF) family proteins are required for the maturation and transport of active lipoprotein lipases. However, the specific roles of LMF2 remain unknown. In this study, a grain aphid lmf2-like gene fragment was cloned and was highly similar in sequence to a homologous gene in the pea aphid, Acyrthosiphon pisum. An RNAi vector was constructed with this fragment and used for wheat transformation. The expression of the lmf2-like gene in aphid, as well as the growth and reproduction of the aphids, was analyzed after feeding on the transgenic wheat. There were no significant differences in the expression of the lmf2-like gene over development. The expression of the lmf2-like gene was significantly reduced by 27.6% on the fifth day, and 57.6% on the 10th day after feeding. The total number of aphids produced on the transgenic plants was less than the number produced on control plants, and the difference became significant or after 2 weeks. The molting numbers were also reduced in the aphids reared on the transgenic plants. Our findings indicate that lmf2-like genes may have potential as a target gene for the control of grain aphids and show that feeding aphids with wheat expressing lmf2-like RNAi resulted in significant reductions in survival and reproduction. © 2017 Wiley Periodicals, Inc.

  12. Hypolipidaemic effects of oat flakes and β-glucans derived from four Chinese naked oat (Avena nuda) cultivars in Wistar-Lewis rats.

    Science.gov (United States)

    Zhou, Xianrong; Lin, Weijing; Tong, Litao; Liu, Xingxun; Zhong, Kui; Liu, Liya; Wang, Lili; Zhou, Sumei

    2016-01-30

    β-Glucan is widely considered to be the major ingredient responsible for the hypolipidaemic effects of oat. Determination of the β-glucan content in naked oat cultivars in China has been largely performed for breeding and food processing. Since oat is generally consumed as oat flakes in China, evaluation of the bioactivity of oat flakes might be more direct and comprehensive than determination of the internal β-glucan. However, the hypolipidaemic activity of oat flakes processed from Chinese oat cultivars has rarely been reported. The nutritional components of four naked oat cultivars were analysed before they were processed to oat flakes. The hypolipidaemic effects of oat flakes and the extracted β-glucans were tested on rats fed a high-fat diet for 30 days. Oat flakes and β-glucans of different origins showed different preventative effects on hyperlipidaemia. Among the four cultivars, β-glucan of 'Bayou-1' showed the greatest hypolipidaemic effect. However, oat flake processed from 'Dingyou-7' showed the best bioactivity to mediate the increase of serum lipid. The hypolipidaemic effect of oat might not only depend on β-glucan, but might also be related to other components. 'Dingyou-7' might be suitable for oat flake processing because of its superior bioactivity. © 2015 Society of Chemical Industry.

  13. Sugarcane crop residue and bagasse allelopathic impact on oat (Avena sative L.), morningglory (Ipomoea purpurea L.), and redroot pigweed (Amaranthus retroflexus L.) germination

    Science.gov (United States)

    Allelopathy, the chemical interaction between plants, may result in the inhibition of plant growth and development, and can include compounds released from a crop that adversely impact crop or weed species. The objective of this research was to determine the allelopathic impact of sugarcane (Sacchar...

  14. Individual and combined effects of ApoE and MTHFR 677C/T polymorphisms on cognitive performance in Spanish adolescents: the AVENA study.

    Science.gov (United States)

    Ruiz, Jonatan R; Castillo, Ruth; Labayen, Idoia; Moreno, Luis A; Fuentes, Miguel García; Lamuño, Domingo González; Alvarez Granda, Jesus L; Lucia, Alejandro; Ortega, Francisco B

    2010-06-01

    To examine the individual and combined associations of ApoE and MTHFR 677C/T polymorphisms with cognitive performance in adolescents. The study comprised 412 Spanish adolescents (13 to 18.5 years of age). Cognitive performance (verbal, numeric and reasoning abilities, and an overall score) was measured by the Spanish-version of the SRA-Test of Educational-Ability. We observed no differences in the cognitive performance study variables in adolescents carrying or not carrying the ApoE epsilon4 variant. Adolescents without the MTHFR 677TT genotype had significantly better cognitive performance than their TT peers. The analysis of the combined effect of these polymorphisms revealed that those individuals carrying both the ApoE epsilon4 variant and the MTHFR 677TT genotype had significantly worse cognitive performance than their peers with other genotype combinations. These findings were independent of sex, age pubertal status, socioeconomic status, physical activity, and skipping breakfast. The results of the present study suggest that the ApoE epsilon4 alone is not associated with cognitive performance in adolescents. Individuals with the MTHFR 677TT genotype had slightly impaired cognitive performance, whereas we observed a combined effect of both the ApoE epsilon4 variant and the MTHFR 677TT genotype on cognitive performance. More research is needed in larger population samples to corroborate our findings. Copyright 2010 Mosby, Inc. All rights reserved.

  15. New Technologies to Reclaim Arid Lands User’s Manual

    Science.gov (United States)

    2002-10-01

    1987). Straw is primarily composed of the stems of cereal grains such as wheat (Triticum aestivum), barley (Hordeum vulgare), or oats ( Avena sativa...et al., 1977). 3.4.3. 7 Seed Pretreatment Pretreatment of seed may include washing, chemical treatments to break seed dormancy , or mechanical...treatments to remove seed appendages or weaken the seed coat. Dormancy of seeds is a major concern for a revegetation project. Dormancy has evolved over

  16. Ruminal degradability and carbohydrates and proteins fractioning of triticale silages in singular culture or in mixtures with oat and/or legumes

    OpenAIRE

    Bumbieris Junior, Valter Harry; Jobim, Cloves Cabreira; Emile, Jean Claude; Rossi, Robson; Calixto Junior, Moyses; Branco, Antonio Ferriani

    2011-01-01

    It was aimed to evaluate the ruminal degradability, and the fractioning of carbohydrates, as well as of the nitrogen fractions of triticale silages in singular culture or in mixtures with oats and/or legumes. The treatments had been: triticale silage (X. Triticosecale Wittimack) (ST); triticale silage + forage pea (Pisum arvense) (STE); triticale silage + oats (Avena strigosa Scheb) + forage pea + vetch (Vicia sativa) (STAE). Three castrated bovine Prim’Holstein males had been used, with aver...

  17. Comparison of cytokinin-binding proteins from wheat and oat grains

    Czech Academy of Sciences Publication Activity Database

    Kamínek, Miroslav; Trčková, M.; Fox, J. E.; Gaudinová, Alena

    2003-01-01

    Roč. 117, č. 4 (2003), s. 453-458 ISSN 0031-9317 R&D Projects: GA ČR GV206/96/K188; GA ČR GA522/02/0530 Institutional research plan: CEZ:AV0Z5038910 Keywords : Cytokinin-binding proteins * Avena sativa * SDS-polyacrylamide gel Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.767, year: 2003

  18. Molecular identification based on coat protein sequences of the Barley yellow dwarf virus from Brazil

    OpenAIRE

    Mar, Talita Bernardon; Lau, Douglas; Schons, Jurema; Yamazaki-Lau, Elene; Nhani Jr., Antônio

    2013-01-01

    Yellow dwarf disease, one of the most important diseases of cereal crops worldwide, is caused by virus species belonging to the Luteoviridae family. Forty-two virus isolates obtained from oat (Avena sativa L.), wheat (Triticum aestivum L.), barley (Hordeum vulgare L.), corn (Zea mays L.), and ryegrass (Lolium multiflorum Lam.) collected between 2007 and 2008 from winter cereal crop regions in southern Brazil were screened by polymerase chain reaction (PCR) with primers designed on ORF 3 (coat...

  19. The effect of elevated cadmium content in soil on the uptake of nitrogen by plants

    Energy Technology Data Exchange (ETDEWEB)

    Ciecko, Z.; Kalembasa, S.; Wyszkowski, M.; Rolka, E. [University of Warmia & Mazury Olsztyn, Olsztyn (Poland). Dept. of Environmental Chemistry

    2004-07-01

    The aim of this study was to determine the effect of cadmium (10, 20, 30 and 40 mg Cd/kg of soil) contamination in soil with the application of different substances (compost, brown coal, lime and bentonite) on the intake of nitrogen by some plants. The correlations between the nitrogen content in the plants and the cadmium concentration in the soil, as well as the plant yield and the content of micro- and macroelements in the plants were determined. Plant species and cadmium dose determined the effects of soil contamination with cadmium on the content of nitrogen. Large doses of cadmium caused an increase in nitrogen content in the Avena sativa straw and roots and in the Zea mays roots. Soil contamination with cadmium resulted in a decrease of nitrogen content in the Avena sativa grain, in above-ground parts and roots of the Lupinus luteus, in the above-ground parts of the Zea mays and in the above-ground parts and roots of Phacelia tanacaetifolia. Among the experimental different substances, the application of bentonite had the strongest and a usually negative effect on the nitrogen content in plants. The greatest effect of bentonite was on Avena sativa grain, above-ground parts Zea mays and Lupinus luteus and Phacelia tanacaetifolia. The content of nitrogen in the plants was generally positively correlated with the content of the macroelements and some of the microelements, regardless of the substances added to the soil.

  20. NCBI nr-aa BLAST: CBRC-TBEL-01-1088 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-TBEL-01-1088 ref|YP_971479.1| protein of unknown function DUF534 [Acidovorax avena...e subsp. citrulli AAC00-1] gb|ABM33705.1| protein of unknown function DUF534 [Acidovorax avenae subsp. citrulli AAC00-1] YP_971479.1 6.5 28% ...

  1. NCBI nr-aa BLAST: CBRC-DNOV-01-2845 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-DNOV-01-2845 ref|YP_970186.1| phosphatidate cytidylyltransferase [Acidovorax avena...e subsp. citrulli AAC00-1] gb|ABM32412.1| phosphatidate cytidylyltransferase [Acidovorax avenae subsp. citrulli AAC00-1] YP_970186.1 3.1 29% ...

  2. NCBI nr-aa BLAST: CBRC-PTRO-10-0019 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-PTRO-10-0019 ref|YP_969567.1| hypothetical protein Aave_1201 [Acidovorax avena...e subsp. citrulli AAC00-1] gb|ABM31793.1| conserved hypothetical protein [Acidovorax avenae subsp. citrulli AAC00-1] YP_969567.1 1.2 31% ...

  3. NCBI nr-aa BLAST: CBRC-XTRO-01-0530 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-XTRO-01-0530 ref|YP_972499.1| apolipoprotein N-acyltransferase [Acidovorax avena...e subsp. citrulli AAC00-1] gb|ABM34725.1| apolipoprotein N-acyltransferase [Acidovorax avenae subsp. citrulli AAC00-1] YP_972499.1 1e-177 68% ...

  4. NCBI nr-aa BLAST: CBRC-XTRO-01-0593 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-XTRO-01-0593 ref|YP_969534.1| integral membrane protein MviN [Acidovorax avena...e subsp. citrulli AAC00-1] gb|ABM31760.1| integral membrane protein MviN [Acidovorax avenae subsp. citrulli AAC00-1] YP_969534.1 1e-141 82% ...

  5. NCBI nr-aa BLAST: CBRC-XTRO-01-0526 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-XTRO-01-0526 ref|YP_972143.1| protein of unknown function DUF214 [Acidovorax avena...e subsp. citrulli AAC00-1] gb|ABM34369.1| protein of unknown function DUF214 [Acidovorax avenae subsp. citrulli AAC00-1] YP_972143.1 0.0 74% ...

  6. NCBI nr-aa BLAST: CBRC-XTRO-01-0178 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-XTRO-01-0178 ref|YP_971711.1| Integral membrane protein TerC [Acidovorax avena...e subsp. citrulli AAC00-1] gb|ABM33937.1| Integral membrane protein TerC [Acidovorax avenae subsp. citrulli AAC00-1] YP_971711.1 1e-169 62% ...

  7. NCBI nr-aa BLAST: CBRC-GACU-09-0002 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-GACU-09-0002 ref|YP_969334.1| hypothetical protein Aave_0962 [Acidovorax avena...e subsp. citrulli AAC00-1] gb|ABM31560.1| hypothetical protein Aave_0962 [Acidovorax avenae subsp. citrulli AAC00-1] YP_969334.1 7.2 25% ...

  8. [Effects of plant hedgerow on population dynamics of wheat aphid and its natural enemies].

    Science.gov (United States)

    Shi, Guo-Qing; Lin, Chao-Wen; Liu, Zhang-Yong; Li, Chuan-Ren; Chen, Yi-Bing; Ma, Tao; Wang, Qi-Feng; Liu, Zhi-Long; Cai, Qing-Nian

    2011-12-01

    This paper studied the effects of planting different kinds of plant hedgerow (Amorpha fruticosa, Vetiveria zizanioides, Eulaliopsis binata, and Medicago sativa) on the population dynamics of wheat aphid and its natural enemies in the hillside wheat fields in Ziyang City of Sichuan Province, Southwest China. On the 20 degrees hillside, A. fruticosa hedgerow inhibited the occurrence of wheat aphid in the wheat field significantly, and the parasitoid densities were equal to or significantly lower than those in the wheat field with V. zizanioides hedgerow. On the 12 degrees hillside, M. sativa and E. binata hedgerows delayed the peak time of wheat aphid occurrence, and E. binata hedgerow suppressed the wheat aphid population density significantly. In the wheat field with M. sativa hedgerow, the parasitoid densities were significantly higher than those with no hedgerow. An equal or significantly higher ladybird density was observed in the field with M. sativa hedgerow. The olfactory responses showed that E. binata volatiles had repellent effect on both Sitobion avenae and Rhopalosiphum padi, but attracted a spider species of oxyopidae. M. sativa volatiles attracted S. avenae, whereas neither M. sativa nor E. binata volatiles caused obvious behavior response of ladybird adults. Therefore, planting A. fruticosa and E. binata as the hedgerows in hillside wheat fields could not only prevent the soil erosion from seasonal rainfall, but also benefit the control of pest insects.

  9. The effect of genotype on anther culture response of cultivated and wild oats

    Directory of Open Access Journals (Sweden)

    E. KIVIHARJU

    2008-12-01

    Full Text Available Anther culture ability was tested for 44 oat (Avena sativa L., six naked oat (A. sativa L., naked type and 15 wild oat (Avena sterilis L. genotypes, in addition to progeny of five intraspecific crosses of A. sativa and two interspecific crosses of A. sativa x A. sterilis. Anther culture response was affected considerably by genotype. Thirty one oat genotypes responded by callus growth on induction medium and seven of them produced embryo structures, two of the lines consistently. All naked oat genotypes produced embryo structures. Embryo production rates for the wild oat lines were comparable with those for the naked oat genotypes, and higher than for oat: 13 of the 15 genotypes tested produced embryo structures. Plant regeneration was possible only from wild oat. The regeneration ability was inherited in the progeny of the A. sativa x A. sterilis cross cv. Puhti x CAV 2648. The response of anthers of oat genotypes was inhibited by auxin on the induction medium, while naked oat, wild oat and A. sativa x A. sterilis crosses responded better on a medium containing 2,4-dichlorophenoxyacetic acid .;

  10. Efeitos de parâmetros de aplicação na açâo dessecante do herbicida sulfosate sobre aveia-preta (Avena strigosa Schreb. Effects of application parameters on desiccation action of sulfosate herbicide on oats (Avena strigosa Schreb.

    Directory of Open Access Journals (Sweden)

    Nilson Gilberto Fleck

    1998-06-01

    Full Text Available O objetivo da pesquisa foi investigar os aspectos da inter-relação da dose herbicida, sua concentração na solução e o volume do veículo diluente na ação do herbicida sulfosate, usando-se aveia-preta como espécie reagente. O experimento foi conduzido no ano agrícola de 1994 na EEA/UFRGS, em Eldorado do Sul, RS. Foram testadas cinco doses de sulfosate (0,75; 1,125; 1,5; 2,25 e 3,0 l ha-1 do produto comercial; cinco volumes de diluente (62; 94; 125; 188 e 250 l ha-1; e cinco concentrações de produto na calda (0,6; 0,9; 1,2; l,8 e 2,4% v/v, mais três padrões para comparação: glyphosate, paraquat+diuron e testemunha não tratada. Em cada situação, um desses parâmetros era mantido constante. Não houve diferença estatística na ação de glyphosate e sulfosate quando ambos foram usados sob as mesmas condições de aplicação. Ao se manter constante a variável volume de calda, constatou-se resposta significativa à dose de sulfosate. Esse comportamento se repetiu quando se manteve constante a concentração herbicida na calda e se variou a dose do produto. Em ambas as situações, níveis finais de controle, variáveis entre 90 e 100%, somente foram alcançados por doses de sulfosate de l,125 l ha-1 ou superiores; dose de 0,75 l ha-1 atingiu apenas 80% de controle. Já quando se manteve constante a dose herbicida, variando-se a concentração do sulfosate na calda, não houve diferença entre os tratamentos. Plantas de aveia tratadas no florescimento com 0,75 l ha-1 de sulfosate acumularam parcialmente reservas nos grãos, os quais também mostraram viabilidade de germinação em bioteste.The objective of this research was to investigate aspects of inter-relations of herbicide rate, its concentration in spray solution, and volume of vehicle diluent in the herbicide action of sulfosate, using oats as reagent species. The experiment was conducted during the 1994, growing season at the EEA/UFRGS, in Eldorado do Sul, RS, Brazil. There were tested five rates of sulfosate (0.75; 1.125; 1.5; 2.5; and 3,0 l ha-1 of formulated product; five diluent volumes (62; 94; 125; 188; and 250 l ha-1; and five concentrations in spray solution (0.6; 0.9; 1.2; 1.8; and 2.4% v/v; and also three standard treatments to compare with: glyphosate, paraquat + diuron, and a check plot not treated. In each situation, one of these parameters was maintained constant. There was no statistical differences in action between glyphosate and sulfosate when both were used under the same application conditions. At maintaining spray volume variable constant, it was detected significant response to sulfosate rate. This same behaviour repeated when herbicide concentration in spray solution was maintained constant and product rate varied. In both situations, final levels of control, varying between 90 and 100%, were reached only by sulfosate rates of 1.125 l ha-1 or higher; rate of 0.75 l ha-1 reached maximum control of 80%. When herbicide rate was maintained fixed, varying sulfosate concentration in spray solution, there were no differences among treatments. Oat plants treated at flowering with 0.75 l ha-1 of sulfosate partially accumulated reserves in grains, which also showed viability of germination in biossay.

  11. Ruminal degradability of oat (Avena sativum L., Coast cross (Cynodon dactilon L., and Esmeralda grass (Joysia japonica hay pellet or not/ Degradabilidade ruminal dos fenos de aveia (Avena sativum L, Coast cross (Cynodon dactilon L., e grama Esmeralda (Joysia japonica peletizado ou não

    Directory of Open Access Journals (Sweden)

    Teresa Cristina Alves

    2006-06-01

    Full Text Available The objective of this work was to evaluate the ruminal degradability of dry matter (DM, crude protein (CP, neutral detergent fiber (NDF and acid detergent fiber (ADF of the oat hay (OH, Coast cross hay (CCH, pellet Esmeralda grass hay (PEH and Esmeralda grass hay (EH. The in situ technique was used, with four bovines, castrated, rumen fistulated, distributed in an Latin square 4x4 experimental design. The material was incubated in the rumen in the times 0, 6, 24, 48, 72 and 144 hours. There was no difference between hays on the degradation rate (c, %/h for the CP, NDF and ADF. For the DM, the OH and PEH presented higher degradation rate. There was difference on the effective degradability (ED, % of the hays, and the observed values were: OH, 48.74%; PEH, 42.44%; EH, 35.13%; CCH, 30.24%. It can be concluded that oat hay presented the highest values for the soluble fraction and for the ED of all nutrients evaluated. The pellet process of the Esmeralda grass resulted in higher ED of the DM and of the fiber, with no alteration on the CP ED.O objetivo deste trabalho foi avaliar a degradabilidade ruminal da matéria seca (MS, proteína bruta (PB, fibra em detergente neutro (FDN e fibra em detergente ácido (FDA do feno de aveia (FA, feno de Coast cross (FCC, feno de grama Esmeralda peletizado (FEP e feno de grama Esmeralda (FE. Foi utilizada a técnica in situ com quatro bovinos machos, castrados, fistulados no rúmen, distribuídos em um delineamento experimental em quadrado latino 4x4. O material foi incubado no rúmen nos tempos de 0, 6, 24, 48, 72 e 144 horas. Não houve diferença entre os fenos na taxa de degradação (c, %/h para a PB, FDN e FDA. Para a MS, o FA e FEP apresentaram maior taxa de degradação. Houve diferença na degradabilidade efetiva (DE da MS dos fenos sendo os valores observados: FA, 48,74%; FEP, 42,44%; FE, 35,13%; FCC, 30,24%. Conclui-se que o feno de aveia obteve maiores valores para a fração solúvel e maior degradabilidade efetiva para todos os nutrientes avaliados e a peletização da grama Esmeralda promoveu maior DE da MS e da fibra, sem alterar a DE da PB.

  12. Origin and domestication of Lactuca sativa L.

    NARCIS (Netherlands)

    Vries, de I.M.

    1997-01-01

    The domestication of lettuce, Lactuca sativa L. is described on the basis of literature study. The centre of origin is discussed. A historical survey is made of the distribution of the groups of Lactuca cultivars over the world.

  13. Neuropharmacological effects of Nigella sativa

    Science.gov (United States)

    Beheshti, Farimah; Khazaei, Majid; Hosseini, Mahmoud

    2016-01-01

    Nigella sativa (NS) (Ranunculaceae family) is generally utilized as a therapeutic plant all over the world. The seeds of the plant have a long history of use in different frameworks of medicines and food. In Islamic literature, it is considered as one of the greatest forms of therapeutics. It has been widely used to treat nervous system diseases such as memory impairment, epilepsy, neurotoxicity, pain, etc. Additionally, this is uncovered that the majority of therapeutic properties of this plant are due to the presence of thymoquinone (TQ) which is a major bioactive component of the essential oil. Pharmacological studies have been done to evaluate the effects of NS on the central nervous system (CNS). The present review is an effort to provide a detailed scientific literature survey about pharmacological activities of the plant on nervous system. Our literature review showed that NS and its components can be considered as promising agents in the treatment of nervous system disorders. PMID:27247928

  14. Clinical and Therapeutic Trials of Nigella Sativa

    Directory of Open Access Journals (Sweden)

    Ragaa H.M. Salama

    2010-10-01

    Full Text Available Seeds of Nigella sativa (N. sativa have been used for thousands of years as a spice and food preservative. The oil and seed constituents have shown potential medicinal properties in traditional medicine. This review lists and discusses different therapeutic trials of N. sativa seeds and its active ingredients in many diseases affecting body systems. It has anti–oxidant effects through enhancing the oxidant scavenger system that leads to antitoxic effects induced by several insults. Its anti–inflammatory effects conduct through suppression of the inflammatory mediators’ prostaglandins and leukotriens. Its immunomodulatory properties were proved by augmenting the T cell and natural killer cell–mediated immune responses. It expresses antimicrobial and anti–tumor properties toward different microbes and cancers. It decreases DNA damage and thereby prevents initiation of carcinogenesis in colonic tissue secondary to exposure to toxic agents. N. sativa is of immense therapeutic benefit in DM. It stimulates glucose–induced secretion of insulin besides having a negative impact on glucose absorption from the intestinal mucosa. N. sativa administration protects hepatic tissue from deleterious effects of toxic substances and attenuates hepatic lipid peroxidation. N. sativa provides a promising strategy that combines anti–inflammatory, antioxidants, and antineoplastics modes of action. [TAF Prev Med Bull 2010; 9(5.000: 513-522

  15. Review: Nigella sativa (Prophetic Medicine): A Review.

    Science.gov (United States)

    Ijaz, Hira; Tulain, Ume Ruqia; Qureshi, Junaid; Danish, Zeeshan; Musayab, Samina; Akhtar, Muhammad Furqan; Saleem, Ammara; Khan, Khanzada Khanzada; Zaman, Muhammad; Waheed, Imran; Khan, Imran; Abdel-Daim, Mohamed

    2017-01-01

    The present report is a significant effort to explore detail description of N. Sativa, its pharmacognostic characteristics, morphological characteristics, and mechanism of actions, doses and medicinal uses. Nigella sativa (N. Sativa) is greatest form of healing medicine. It is also known as Prophetic Medicine as its use has been mentioned in Prophetic Hadit, as natural remedy for all the diseases except death. It is recommended on daily basis in Tibb-e-Nabwi (Prophetic Medicine). Hazrat Abu Hurairah States ''I have heard from Rasool Allah (PBUH) that there is cure for every disease in black seeds except death and black seeds are shooneeze''. Salim Bin Abdullah narrates with reference to his father Hazrat Abdullah Bin Omar that Rasool Allah (PBUH) said, 'Let all the black seed upon you, these contain cure of all diseases except death'. N. sativa claimed to have anti-inflammatory, analgesic, hepato-protective, neuro-protective, gastro-protective and other useful properties. Biological and pharmacological effects are attributed to its two important constituents Thymoquinone (TQ) and Nigella sativa oil (NSO). TQ has interaction with human serum albumin. Seeds containing volatile oils mainly Melanthin showed toxicity at larger doses. This report is a reference for all pharmaceutical researchers, physicians and biologists researching on N. sativa and will open a door towards novel agent.

  16. Nutritional value of black and white oat cultivars ensiled in two phenological stages Valor nutricional de cultivares de aveia preta e branca ensiladas em dois estádios fenológicos

    Directory of Open Access Journals (Sweden)

    Diego Bitencourt de David

    2010-07-01

    Full Text Available It was evaluated in this work, crop yield, fermentative quality and nutritional value of the silage of cultivars of white (Avena Sativa L. and black (Avena Strigosa Schreb oats cut at two development stages. It was used an experimental randomized block design in a 4 x 2 factorial scheme, consisting of four oat cultivars (two cultivars of black oats: Aveia Preta Comum and UTFP 971; and two cultivars of white oats: ER 91156- 1- 2- 1 and SI 98105- b, with four replicates. The cultivars were ensiled at flowering and dough grain stages. Oat cut at dough grain stage, especially genotypes from white oat, allows the obtainment of a more productive and qualitative silage. Cultivar, genotype, and maturation stage affect protein fractioning and oat silage carbohydrates.Avaliaram- se a produção das culturas, a qualidade fermentativa e o valor nutricional da silagem de cultivares de aveia- branca (Avena Sativa L. e aveia- preta (Avena Strigosa Schreb submetidas ao corte em dois estádios de maturação. O delineamento experimental foi de blocos ao acaso, num arranjo fatorial 4 x 2, composto por quatro cultivares de aveia (dois de aveia- preta: Comum e UTFP 971; e dois de aveia- branca: ER 91156- 121 e SI 98105- b, com quatro repetições. Os cultivares foram ensilados nos estádios de floração e grão pastoso. O corte da aveia no estádio de grão pastoso, sobretudo dos genótipos de aveia- branca, possibilita obter silagem de maior qualidade, tanto produtiva quanto qualitativa. O cultivar, o genótipo e o estádio de maturação influenciam o fracionamento das proteínas e dos carboidratos de silagens de aveia.

  17. Selección de abonos verdes para los suelos de Turmequé (Boyacá

    Directory of Open Access Journals (Sweden)

    Viteri Silvio

    2008-08-01

    Full Text Available

    El objetivo de este estudio fue identificar asociaciones de abonos verdes con el mejor potencial como fuente de materia orgánica para los suelos del municipio de Turmequé (Boyacá. Los experimentos se desarrollaron en tres fincas, ubicadas a 2.300, 2.650 y 2.860 msnm. De cada finca se tomó una muestra representativa de suelo, que se envió al laboratorio para análisis de fertilidad. Los tratamientos incluyeron 10 asociaciones triples y 3 cuádruples. Las asociaciones se conformaron con la leguminosa vicia atropurpúrea (Vicia sativa L. en combinación con avena caldas (Avena sativa L., girasol (híbrido Hi Doris (Helianthus annus L., higuerilla (Ricinus communis L., nabo forrajero (Raphanus sativus L. o quinua (Chenopodium quinua. El porcentaje de semilla leguminosa respecto a las otras especies en las asociaciones triples fue 40:30:30 y en las cuádruples 40:20:20:20. El porcentaje de semilla de cada especie se calculó con base en la cantidad recomendada para siembra en monocultivo. Se utilizó el diseño de bloques completos al azar, con 13 tratamientos y 3 repeticiones. Las variables determinadas fueron producción de materia verde por especie, por asociación y por las plantas arvenses y materia seca por asociación. Además, se observó la tolerancia de las especies al ataque de plagas y enfermedades. Los resultados indicaron que entre las especies estudiadas las más promisorias son el nabo forrajero, la avena y la vicia, conformando la asociación vicia × avena × nabo forrajero.

  18. Evaluation of Oryza sativa x O. glaberrima derived progenies for ...

    African Journals Online (AJOL)

    The genus Oryza has two cultivated species, Asian rice (Oryza sativa L.) and African rice (Oryza glaberrima Steud.) and 22 wild species. O. glaberrima is low yielding but has useful genes for resistance to biotic and abiotic stresses. Introgression lines derived from backcrossing of O. sativa x O. glaberrima, using O. sativa as ...

  19. Cardiovascular benefits of black cumin (Nigella sativa).

    Science.gov (United States)

    Shabana, Adel; El-Menyar, Ayman; Asim, Mohammad; Al-Azzeh, Hiba; Al Thani, Hassan

    2013-03-01

    Black Cumin (Nigella sativa), which belongs to the botanical family of Ranunculaceae, commonly grows in Eastern Europe, the Middle East, and Western Asia. Its ripe fruit contains tiny black seeds, known as "Al-Habba Al-Sauda" and "Al-Habba Al-Barakah" in Arabic and black seed or black cumin in English. Seeds of Nigella sativa are frequently used in folk medicine in the Middle East and some Asian countries for the promotion of good health and the treatment of many ailments. However, data for the cardiovascular benefits of black cumin are not well-established. We reviewed the literature from 1960 to March 2012 by using the following key words: "Nigella sativa," "black seeds," and "thymoquinone." Herein, we discussed the most relevant articles to find out the role of Nigella sativa in the cardiovascular diseases spectrum especially when there is a paucity of information and need of further studies in human to establish the utility of Nigella sativa in cardiovascular system protection.

  20. Phytochemistry of Cannabis sativa L.

    Science.gov (United States)

    ElSohly, Mahmoud A; Radwan, Mohamed M; Gul, Waseem; Chandra, Suman; Galal, Ahmed

    Cannabis (Cannabis sativa, or hemp) and its constituents-in particular the cannabinoids-have been the focus of extensive chemical and biological research for almost half a century since the discovery of the chemical structure of its major active constituent, Δ 9 -tetrahydrocannabinol (Δ 9 -THC). The plant's behavioral and psychotropic effects are attributed to its content of this class of compounds, the cannabinoids, primarily Δ 9 -THC, which is produced mainly in the leaves and flower buds of the plant. Besides Δ 9 -THC, there are also non-psychoactive cannabinoids with several medicinal functions, such as cannabidiol (CBD), cannabichromene (CBC), and cannabigerol (CBG), along with other non-cannabinoid constituents belonging to diverse classes of natural products. Today, more than 560 constituents have been identified in cannabis. The recent discoveries of the medicinal properties of cannabis and the cannabinoids in addition to their potential applications in the treatment of a number of serious illnesses, such as glaucoma, depression, neuralgia, multiple sclerosis, Alzheimer's, and alleviation of symptoms of HIV/AIDS and cancer, have given momentum to the quest for further understanding the chemistry, biology, and medicinal properties of this plant.This contribution presents an overview of the botany, cultivation aspects, and the phytochemistry of cannabis and its chemical constituents. Particular emphasis is placed on the newly-identified/isolated compounds. In addition, techniques for isolation of cannabis constituents and analytical methods used for qualitative and quantitative analysis of cannabis and its products are also reviewed.

  1. Terpene synthases from Cannabis sativa.

    Directory of Open Access Journals (Sweden)

    Judith K Booth

    Full Text Available Cannabis (Cannabis sativa plants produce and accumulate a terpene-rich resin in glandular trichomes, which are abundant on the surface of the female inflorescence. Bouquets of different monoterpenes and sesquiterpenes are important components of cannabis resin as they define some of the unique organoleptic properties and may also influence medicinal qualities of different cannabis strains and varieties. Transcriptome analysis of trichomes of the cannabis hemp variety 'Finola' revealed sequences of all stages of terpene biosynthesis. Nine cannabis terpene synthases (CsTPS were identified in subfamilies TPS-a and TPS-b. Functional characterization identified mono- and sesqui-TPS, whose products collectively comprise most of the terpenes of 'Finola' resin, including major compounds such as β-myrcene, (E-β-ocimene, (--limonene, (+-α-pinene, β-caryophyllene, and α-humulene. Transcripts associated with terpene biosynthesis are highly expressed in trichomes compared to non-resin producing tissues. Knowledge of the CsTPS gene family may offer opportunities for selection and improvement of terpene profiles of interest in different cannabis strains and varieties.

  2. Weed infestation of onion in soil reduced cultivation system

    Directory of Open Access Journals (Sweden)

    Marzena Błażej-Woźniak

    2013-12-01

    Full Text Available Field experiment was conducted in the years 1998-2000 in GD Felin. The influence of no-tillage cultivation and conventional tillage with spring ploughing on weed infestation of onion was compared. In experiment four cover crop mulches (Sinapis alba L., Vicia sativa L., Phacelia tanacetifolia B., Avena sativa L. were applied. From annual weeds in weed infestation of onion in great number Matricaria chamomilla L., and Senecio vulgaris L. stepped out. and from perennial - Agropyron repens (L.P.B. Reduced soil cultivation system (no-tillage caused the significant growth of primary weed infestation of onion in comparison with conventional tillage. In all years of investigations the executed pre-sowing ploughing limited significantly the annual weeds' number in primary weed infestation. The applied mulches from cover plants limited in considerable degree the number of primary weed infestation. In all years of investigations the most weeds stepped out on control object. Among investigated cover crop mulches Vicia sativa L. and Avena sativa L. had a profitable effect on decrease of onion`s primary weed infestation. Soil cultivation system and cover crop mulches had no signi ficant residual influence on the secondary weed infestation of onion.

  3. The influence of intercrop plants and the date of their ploughing-in on weed infestation of root chicory (Cichorium intybus L. var. sativum (Bisch. Janch.

    Directory of Open Access Journals (Sweden)

    Marzena Błażewicz-Woźniak

    2012-12-01

    Full Text Available The field experiment was carried out in 2006-2008 in the Felin Experimental Farm (University of Life Sciences in Lublin on podzolic soil developed from dusty medium loam. Root chicory (Cichorium intybus L. var. sativum (Bisch. Janch. cv. Polanowicka was involved in the experiment. The experimental factors were 3 species of intercrop plants: common vetch (Vicia sativa, phacelia (Phacelia tanacetifolia, oat (Avena sativa and 2 dates of ploughing-in: pre-winter and spring. In total, 26 taxons characteristic for vegetable plantations were identified in chicory weed infestation. Monocarpic species dominated, among which Senecio vulgaris, Chenopodium album, Lamium amplexicaule, Galinsoga ciliata, and Capsella bursa-pastoris were predominant. The date of ploughing-in did not significantly affect the status and size of weed infestation of chicory plots. Short-lived species occurred after pre-winter ploughing-in, while perennial - after spring ploughing-in. The application of intercrops significantly reduced chicory weed infestation as compared to the cultivation with no intercrop. The ploughing-in of Avena sativa biomass appeared to be the most efficient. The intercrop plants reduced the occurrence of Senecio vulgaris and Capsella bursa-pastoris which were the most numerous in the treatment without intercrops. Biomass of Vicia sativa favored the growth of Chenopodium album and Lamium amplexicaule. The secondary weed infestation did not depend on agrotechnical factors applied during the experiment.

  4. Polyketide synthases in Cannabis sativa L.

    NARCIS (Netherlands)

    Flores Sanchez, Isvett Josefina

    2008-01-01

    Cannabis sativa L. plants produce a diverse array of secondary metabolites, which have been grouped in cannabinoids, flavonoids, stilbenoids, terpenoids, alkaloids and lignans; the cannabinoids are the best known group of natural products from this plant. The pharmacological aspects of this

  5. Cannabis sativa allergy: looking through the fog.

    Science.gov (United States)

    Decuyper, I I; Van Gasse, A L; Cop, N; Sabato, V; Faber, M A; Mertens, C; Bridts, C H; Hagendorens, M M; De Clerck, L; Rihs, H P; Ebo, D G

    2017-02-01

    IgE-mediated Cannabis (C. sativa, marihuana) allergy seems to be on the rise. Both active and passive exposure to cannabis allergens may trigger a C. sativa sensitization and/or allergy. The clinical presentation of a C. sativa allergy varies from mild to life-threatening reactions and often seems to depend on the route of exposure. In addition, sensitization to cannabis allergens can result in various cross-allergies, mostly for plant foods. This clinical entity, designated as the 'cannabis-fruit/vegetable syndrome', might also imply cross-reactivity with tobacco, natural latex and plant-food-derived alcoholic beverages. Hitherto, these cross-allergies are predominantly reported in Europe and appear mainly to rely upon cross-reactivity between nonspecific lipid transfer proteins or thaumatin-like proteins present in C. sativa and their homologues, ubiquitously distributed throughout plant kingdom. At present, diagnosis of cannabis-related allergies predominantly rests upon a thorough history completed with skin testing using native extracts from crushed buds and leaves. However, quantification of specific IgE antibodies and basophil activation tests can also be helpful to establish correct diagnosis. In the absence of a cure, treatment comprises absolute avoidance measures. Whether avoidance of further use will halt the extension of related cross-allergies remains uncertain. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  6. Nigella sativa provides protection against metabolic syndrome ...

    African Journals Online (AJOL)

    Improvement in all other parameters like blood pressure, circumference of waist and serum triglyceride was also observed. Thus, Nigella seeds were found to be effective as an adjuvant therapy in patients of dyslipidemia and hyperglycemia. Keywords: Nigella sativa, toxicity, hyperglycemia, adjuvant, antihistaminic, ...

  7. Mengenal Karakter Tanaman Alfalfa (Medicago Sativa L.)

    OpenAIRE

    Subantoro, Renan

    2009-01-01

    Alfalfa in Arab Ianguage have meaning as "Father from all food" trusted as functioning crop to heal various disease. Factor influencing growth of alfalfa crop is internal and eksternal factor. Inhibitor factor growth of alfalfa crop do not only land : land, water, temperature, and light intencity, and also weeds factor. Study in this article use literature study method from various source of research result and book which have been done by writer. The crop Alfalfa (Medicago Sativa L) hav...

  8. The Novel Kasugamycin 2′-N-Acetyltransferase Gene aac(2′)-IIa, Carried by the IncP Island, Confers Kasugamycin Resistance to Rice-Pathogenic Bacteria

    OpenAIRE

    Yoshii, Atsushi; Moriyama, Hiromitsu; Fukuhara, Toshiyuki

    2012-01-01

    Kasugamycin (KSM), a unique aminoglycoside antibiotic, has been used in agriculture for many years to control not only rice blast caused by the fungus Magnaporthe grisea but also rice bacterial grain and seedling rot or rice bacterial brown stripe caused by Burkholderia glumae or Acidovorax avenae subsp. avenae, respectively. Since both bacterial pathogens are seed-borne and cause serious injury to rice seedlings, the emergence of KSM-resistant B. glumae and A. avenae isolates highlights the ...

  9. "Navajita Cecilia" Bouteloua gracilis H.B.K (Lag.). Nueva variedad de pasto para zonas áridas y semiáridas

    OpenAIRE

    Sergio Beltrán López; Carlos Alberto García Díaz; José Antonio Hernández Alatorre; Catarina Loredo Osti; Jorge Urrutia Morales; Luis Antonio González Eguiarte; Héctor Guillermo Gámez Vázquez

    2010-01-01

    Los objetivos fueron evaluar el efecto combinado de diferentes dosis de inoculante (Rhodococcus fascians) y fertilización nitrogenada en la producción de forraje de gramíneas así como la relación costo/beneficio. Las gramíneas fueron: Avena sativa L, Lolium multiflorum Lam yTriticum durum L con los siguientes tratamientos: inoculación, fertilización nitrogenada (0, 30, 60 kg N ha-1), y la combinación de inoculante y fertilización. Las especies se establecieron en condiciones de riego en un...

  10. Infrared light-emitting diode radiation causes gravitropic and morphological effects in dark-grown oat seedlings

    Science.gov (United States)

    Johnson, C. F.; Brown, C. S.; Wheeler, R. M.; Sager, J. C.; Chapman, D. K.; Deitzer, G. F.

    1996-01-01

    Oat (Avena sativa cv Seger) seedlings were irradiated with IR light-emitting diode (LED) radiation passed through a visible-light-blocking filter. Infrared LED irradiated seedlings exhibited differences in growth and gravitropic response when compared to seedlings grown in darkness at the same temperature. Thus, the oat seedlings in this study were able to detect IR LED radiation. These findings call into question the use of IR LED as a safe-light for some photosensitive plant response experiments. These findings also expand the defined range of wavelengths involved in radiation-gravity (light-gravity) interactions to include wavelengths in the IR region of the spectrum.

  11. Efeito de fungos contaminantes na produtividade de dois isolados de Agaricus blazei em duas formulações de composto

    OpenAIRE

    Andrade, Meire Cristina Nogueira de [UNESP; Minhoni, Marli Teixeira de Almeida [UNESP; Zied, Diego Cunha [UNESP; Sales-Campos, Ceci; Kopytowski Filho, João

    2011-01-01

    The effect of the contaminant fungi Trichoderma sp. and Chaetomium olivacearum on the cultivation of the ABL 99/30 and ABL 04/49 isolates of A. blazei in two compost formulations made up with tyfton (Cynodom dactylon) and oat (Avena sativa) was evaluated. The experimental design was a totally randomized 2 x 2 x 3 factorial design with 6 repetitions. The experimental unit consisted of 12-12.5 kg of wet compost. During the spawning, 150 g of Trichoderma sp. and C. olivacearum were added to the ...

  12. Protective effect of Allium sativa extract against carbon tetrachloride ...

    African Journals Online (AJOL)

    Although the administration of A. sativa extract to the rats did not restore full therapeutic benefits within the experimental time (t = 76 h), the capacity of the plant extract to ameliorate oxidative stress and hyperlipidemia in the animals was fairly at par with the standard hepatic drug-hepaticum. Keywords: Allium sativa ...

  13. Molecular diversity study of black cumin ( Nigella sativa L.) from ...

    African Journals Online (AJOL)

    Nigella sativa L. (commonly known as black cumin) belonging to family Rannunculaceae is an important medicinal plant with worldwide distribution. In Ethiopia, N. sativa occurs in all regions and agro-ecologies at different altitudinal ranges. This plant has a lot of importance in Ethiopia. However, there is no information ...

  14. Chemical composition of Nigella sativa Linn: Part 2 Recent advances

    OpenAIRE

    Akram Khan, M.; Afzal, M.

    2016-01-01

    The black cumin or Nigella sativa L. seeds have many acclaimed medicinal properties such as bronchodilatory, hypotensive, antibacterial, antifungal, analgesic, anti-inflammatory and immunopotentiating. This review article is an update on the previous article published on Nigella sativa L. in this journal in 1999. It covers the medicinal properties and chemical syntheses of the alkaloids isolated from the seeds of the herb.

  15. Chemical composition of Nigella sativa Linn: Part 2 Recent advances.

    Science.gov (United States)

    Akram Khan, M; Afzal, M

    2016-06-01

    The black cumin or Nigella sativa L. seeds have many acclaimed medicinal properties such as bronchodilatory, hypotensive, antibacterial, antifungal, analgesic, anti-inflammatory and immunopotentiating. This review article is an update on the previous article published on Nigella sativa L. in this journal in 1999. It covers the medicinal properties and chemical syntheses of the alkaloids isolated from the seeds of the herb.

  16. Assessment of genomic relationship between Oryza sativa and ...

    African Journals Online (AJOL)

    For genomic in situ hybridization, genomic DNA from O. australiensis was used as probe for the mitotic and meiotic chromosomes of the hybrid between O. sativa and O. australiensis. GISH revealed unequivocal discrimination of O. australiensis chromosomes that appeared yellow due to hybridization signal from O. sativa ...

  17. Genomic affinity between Oryza sativa and Oryza brachyantha as ...

    African Journals Online (AJOL)

    The chromosome pairing was examined in pollen mother cells of O. brachyantha, O.sativa and the hybrid between O. sativa and O. brachyantha. ... The meiosis was highly irregular showing unequal distribution of chromosomes at anaphase, formation of multipolar bodies and variation in the cell cycle of both genomes.

  18. The effects of Nigella sativa powder (black seed) and Echinacea ...

    African Journals Online (AJOL)

    ajl yemi

    2011-12-19

    Dec 19, 2011 ... groups were fed basal diets and received water without any supplementation. Birds in treatment ... Key words: Nigella sativa, Echinacea purpurea (L.) Moench, performance, serum biochemistry, blood hematology, broiler. ..... sativa) seeds on egg production and quality in white Leghorn layers. J. Anim.

  19. Nigella Sativa reverses osteoporosis in ovariectomized rats.

    Science.gov (United States)

    Seif, Ansam Aly

    2014-01-14

    Osteoporosis poses a significant public health issue. It is a skeletal disorder characterized by compromised bone strength that predisposes to increased risk of fracture. There is a direct relationship between the lack of estrogen after menopause and the development of osteoporosis. About 33% of women over 50 will experience bone fractures as a result of osteoporosis. Nigella Sativa (NS) has been shown to have beneficial effects on bone and joint diseases. The present study was conducted to elucidate the protective effect of Nigella Sativa on osteoporosis produced by ovariectomy in rats. Female Wistar rats aged 12-14 months were divided into three groups: sham-operated control (SHAM), ovariectomized (OVX), and ovariectomized supplemented with nigella sativa (OVX-NS) orally for 12 weeks; 4 weeks before ovariectomy and 8 weeks after. After 12 weeks, plasma levels of calcium (Ca(+2)), phosphorous (Pi), alkaline phosphatase (ALP), amino terminal collagen type 1 telopeptide, malondialdehyde (MDA), nitrates, nitric oxide surrogate, tumor necrosis factor-α (TNF-α), and interleukin-6 (IL-6) were measured. Histological examination of the liver and the tibia was conducted. Histomorphometric analysis of the tibia was also performed. OVX rats showed significant decrease in plasma Ca(+2), accompanied by a significant increase in plasma ALP, amino terminal collagen type 1 telopeptide, MDA, nitrates, TNF-α and IL-6. These changes were reversed by NS supplementation in OVX-NS group to be near SHAM levels. Histological examination of the tibias revealed discontinuous eroded bone trabeculae with widened bone marrow spaces in OVX rats accompanied by a significant decrease in both cortical and trabecular bone thickness compared to Sham rats. These parameters were markedly reversed in OVX-NS rats. Histological examination of the liver showed mononuclear cellular infiltration and congestion of blood vessels at the portal area in OVX rats which were not found in OVX-NS rats. Nigella

  20. Plant Identity Exerts Stronger Effect than Fertilization on Soil Arbuscular Mycorrhizal Fungi in a Sown Pasture.

    Science.gov (United States)

    Zheng, Yong; Chen, Liang; Luo, Cai-Yun; Zhang, Zhen-Hua; Wang, Shi-Ping; Guo, Liang-Dong

    2016-10-01

    Arbuscular mycorrhizal (AM) fungi play key roles in plant nutrition and plant productivity. AM fungal responses to either plant identity or fertilization have been investigated. However, the interactive effects of different plant species and fertilizer types on these symbiotic fungi remain poorly understood. We evaluated the effects of the factorial combinations of plant identity (grasses Avena sativa and Elymus nutans and legume Vicia sativa) and fertilization (urea and sheep manure) on AM fungi following 2-year monocultures in a sown pasture field study. AM fungal extraradical hyphal density was significantly higher in E. nutans than that in A. sativa and V. sativa in the unfertilized control and was significantly increased by urea and manure in A. sativa and by manure only in E. nutans, but not by either fertilizers in V. sativa. AM fungal spore density was not significantly affected by plant identity or fertilization. Forty-eight operational taxonomic units (OTUs) of AM fungi were obtained through 454 pyrosequencing of 18S rDNA. The OTU richness and Shannon diversity index of AM fungi were significantly higher in E. nutans than those in V. sativa and/or A. sativa, but not significantly affected by any fertilizer in all of the three plant species. AM fungal community composition was significantly structured directly by plant identity only and indirectly by both urea addition and plant identity through soil total nitrogen content. Our findings highlight that plant identity has stronger influence than fertilization on belowground AM fungal community in this converted pastureland from an alpine meadow.

  1. Primary human monocyte differentiation regulated by Nigella sativa pressed oil.

    Science.gov (United States)

    Mat, Mahaya C; Mohamed, Azman S; Hamid, Shahrul S

    2011-11-21

    Oxidized low density lipoprotein plays an important role in development of foam cells in atherosclerosis. The study was focused on regulation of primary human monocyte growth and CD11b expression in presence of Nigella sativa oil. Primary human monocytes were isolated from whole blood and grown at 37°C and 5% CO₂ saturation for five days prior to treatment with Nigella sativa oil. The cells were plated and washed before treatment with ox-LDL (10 μg/ml) as positive control and combined treatment of ox-LDL (10 μg/ml) and (140 ng/ml) Nigella sativa oil. The growth progression was monitored every 24 hours for 3 days. Macrophages showed reduced growth in comparison to monocytes 24 hours after treatment with Nigella sativa oil. The mean cell diameter was significantly different between untreated and treated condition in monocytes and macrophages (p Nigella sativa oil. This was further supported by cell surface expression analysis, where CD11b was markedly reduced in cells treated with combination oxLDL and Nigella sativa oil compared to oxLDL alone. More cells differentiated into macrophage-like cells when monocytes were supplemented with oxidized LDL alone. The finding provides preliminary evidence on regulation of cell growth and differentiation in monocyte and monocyte-derived macrophages by Nigella sativa oil. Further investigations need to be conducted to explain its mechanism in human monocyte.

  2. Effects of Avena nuda L. on metabolic control and cardiovascular disease risk among Chinese patients with diabetes and meeting metabolic syndrome criteria: secondary analysis of a randomized clinical trial.

    Science.gov (United States)

    Ma, X; Gu, J; Zhang, Z; Jing, L; Xu, M; Dai, X; Jiang, Y; Li, Y; Bao, L; Cai, X; Ding, Y; Wang, J; Li, Y; Li, Y

    2013-12-01

    Most patients with Type 2 diabetes mellitus(DM) also have metabolic syndrome (MetS), which is associated with an increased risk of coronary heart disease prevalence. Limited information is available on the effect and effective doses of oat intake with a structured dietary intervention in metabolic control and cardiovascular disease (CVD) risk prevention with the population who has Type 2 DM and meets the MetS criteria. A total of 260 Type 2 DM patients meeting MetS National Cholesterol Education Program Adult Treatment Panel III criteria were selected from 445 patients between 50 and 65 years of age, and they participated in a single-blinded, 30-day centralized management of a dietary program in China. Participants in the program were randomly assigned into one of the four groups: usual care group (control group, only basic health advice), diet group (systematic diet plans and intensive education), 50 g-organic naked oat with whole germ group (ONOG) and 100 g-organic naked oat with whole germ group (daily ONOG replacement boiled into porridge based on diet group). The primary outcomes were the relative changes in glycosylated hemoglobin (HbA1c) and insulin resistance after a 30-day intervention among the four groups. HbA1c decreased significantly with the increase in interventions (Ptrend<0.05). Similar results were also obtained in plasma glucose, serum lipid and hypersensitive C-reactive protein (hs-CRP). For the 100 g-ONOG group but not 50 g-ONOG group, HbA1c and hs-CRP reduced significantly by 0.51% and 1.29 mg/l (P<0.05, vs diet group), respectively. The 100 g-ONOG group showed a reduction by 0.22 U*mol/l(2) in insulin resistance, compared with the 50 g-ONOG group (P=0.039). Compared with diet alone or no diet, 50-100 g/day ONOG supplement to structured dietary intervention, at a dose of 100 g/day especially, contributes to the Type 2 DM patients meeting MetS criteria in their metabolic control and CVD risk prevention, with external factors being controlled.

  3. Study of Seed Germination and Morphological Characteristics of Wild Oat(Avena ludoviciana and Mustard (Sinapis arvensis Seedling, Affected by Aqueous Extracts of Black Cumin (Bunium persicum L, Chickpea (Cicer arietinum L and Mixed of Extracts

    Directory of Open Access Journals (Sweden)

    R Moradi

    2012-02-01

    Full Text Available Abstract In order to evaluate the effects of shoot aqueous extracts of chickpea, black cumin and their mixed aqueous extracts on seed germination and seedling morphological characteristics of wild oat and mustard as two common weed, an experiment was conducted with a factorial arrangement based on completely randomized design with three replications. The experimental treatments were aqueous extracts in five levels (0, 10, 20, 40 and 60 percentage, Weed species in two levels (wild oat and mustard and extract concentration in five levels (0, 10, 20. 40 and 60 percentage. Result indicated that the highest and the lowest percentage and seed germination rate, length of radicle and hypocotyle, dry weight of radicle and hypocotyle and radicle / hypocotyle ratio (R/H, were obtained in control treatment and 60% concentration, respectively. Aqueous extract of black cumin and mixed extracts had the highest and the lowest effect on percentage and seed germination rate, length of radicle and hypocotyle, dry weight of radicle and hypocotyle and radicle / hypocotyle ratio, respectively. Between two weed species, wild oat had the lowest percentage of seed germination and length of radicle compared with mustard. Mustard had the lowest seed germination rate, dry weight of radicle and hypocotyle and length of hypocotyle compare with wild oat. Generally, it was concluded that chickpea and black cumin aqueous extracts have highly inhibitory in terms of weed control that can be useful for sustainable agriculture. Keywords: Allelopathy, Black cumin, Chickpea, Extract, Mustard, Wild oat

  4. Monitoramento para avaliação do estágio de biorremediação de áreas contaminadas com o bioindicador vegetal Avena strigosa L.

    OpenAIRE

    Gonçalves, Claudia Martins

    2012-01-01

    O presente trabalho tem como objetivo de estudo o desenvolvimento de metodologia para o monitoramento da biorremediação de solos contaminados com resíduos oleosos, através do uso de bioindicador vegetal para o estabelecimento de critérios na avaliação do estado de biorremediação do solo. Considera que as normas utilizadas em geral estabelecem somente os limites de metais pesados no solo, como exemplo, chumbo, zinco, cobre, níquel e cádmio. Após a biorremediação os metais são liberados para o ...

  5. Metodologia para a utilização da Avena strigosa L., como bioindicadora de estado de biorremediação de solo contaminado por resíduos de refino de petróleo

    OpenAIRE

    Nascimento Neto, Durval

    2012-01-01

    Resumo: O presente trabalho têm como objeto de estudo o desenvolvimento de metodologia para a avaliação do estado de biorremediação de solos contaminados com resíduos provenientes do refino de petróleo através de bioindicador vegetal para monitoramento do processo de biorremediação e caracterização do impacto ambiental de áreas contaminadas. Para tanto foram estudados o comportamento morfofisiológico de uma espécie indicadora de estado de biorremediação de solos contaminados com resíduos ole...

  6. Induction of cellular accessibility and inaccessibility and suppression and potentiation of cell death in oat attacked by ¤Blumeria graminis¤ f.sp. ¤avenae¤

    DEFF Research Database (Denmark)

    Carver, T.L.W.; Lyngkjær, M.F.; Neyron, L.

    1999-01-01

    , suggesting that induced changes in (in)accessibility may be a common consequence of B. graminis attack in cereals. As expected, in Maldwyn, cell death was a consistent but infrequent response to attack (5-20%, of attacks caused cell death in controls). Here, the successful formation of an inducer haustorium......, or of a papilla due to failed attack, totally suppressed the cell death response to later challenge attack on D0 cells, but had less effect on neighbouring cells. Conversely, death of a Maldwyn epidermal cell due to inducer attack potentiated cell death in adjacent cells where up to 80% of challenge attacks...... caused death. This effect was transmitted to some extent to two cells distance. (C) 1999 Academic Press....

  7. Individual and Combined Effects of ApoE and MTHFR 677C/T Polymorphisms on Cognitive Performance in Spanish Adolescents: The AVENA Study RID C-7661-2009

    OpenAIRE

    Ruiz, Jonatan R.; Castillo, Ruth; Labayen, Idoia; Moreno López, Luis A.; García Fuentes, Miguel; González Lamuno, Domingo; Álvarez Granda, Jesús L.; Lucía Mulas, Alejandro; Ortega, Francisco B.; Avena Study Group

    2010-01-01

    Objective To examine the individual and combined associations of ApoE and MTHFR 677C/T polymorphisms with cognitive performance in adolescents. Study design The study comprised 412 Spanish adolescents (13 to 18.5 years of age). Cognitive performance (verbal, numeric and reasoning abilities, and an overall score) was measured by the Spanish-version of the SRA-Test of Educational-Ability. Results We observed no differences in the cognitive performance study variables in adolescents carrying or ...

  8. Ameliorative effects of Nigella sativa on dyslipidemia.

    Science.gov (United States)

    Asgary, S; Sahebkar, A; Goli-Malekabadi, N

    2015-10-01

    Dyslipidemia is an established risk factor for ischemic heart disease. Nigella sativa (NS) is a medicinal plant that has been used for the treatment and prevention of a variety of diseases, in particular hyperlipidemia. We reviewed the existing literature published until 2014 by using the following keywords: ''Nigella sativa'', ''black cumin'', ''black seeds'', ''thymoquinone'', and ''lipid''. In the conducted studies, different preparations of NS including seed powder (100 mg-20 g daily), seed oil (20-800 mg daily), thymoquinone (3.5-20 mg daily), and seed extract (methanolic extract especially), were shown to reduce plasma levels of total cholesterol, low-density lipoprotein cholesterol (LDL-C) and triglycerides, but the effect on high-density lipoprotein cholesterol (HDL-C) was not significant. NS and thymoquinone have been reported to be safe and well tolerated with no severe adverse effect. In clinical trials, NS was found to be effective when added as adjunct to standard antihyperlipidemic and antidiabetic medications. Lipid-modifying effects of NS could be attributed to the inhibition of intestinal cholesterol absorption, decreased hepatic cholesterol synthesis, and up-regulation of LDL receptors. Overall, the evidence from experimental and a clinical studies suggests that NS seeds are a promising natural therapy for dyslipidemic patients.

  9. Characterization of wide cross derivatives in rice Oryza sativa L ...

    African Journals Online (AJOL)

    Characterization of wide cross derivatives in rice Oryza sativa L. using genomic in situ hybridization (GISH). FM Abbas, M Afza, F Perveen, R Masood, SH Shah, AH Shah, R Mujaddad, A Majid, M Sajid, A Gul ...

  10. Cannabinoids production in Cannabis sativa L.: An in vitro approach

    OpenAIRE

    Farag, Sayed

    2014-01-01

    Cannabis sativa L. (Cannabaceae) is the oldest known medicinal plant. For millennia, the plant has also been used for fibre and oil production.The most prominent feature of C. sativa is the psychoactive effect ascribed to its secondary metabolites, cannabinoids (mainly to tetrahydrocannabinol, THC). However, many other pharmacological properties of the aforementioned specialized compounds have been described. Currently, the demand for THC for various medical applications is substantial, while...

  11. Gamma radiation sensitivity in Nigella sativa L

    International Nuclear Information System (INIS)

    Datta, A.K.; Biswas, A.K.; Sen, S.

    1986-01-01

    Gamma irradiation induced mutagenic sensitivity of Nigella sativa L. (black cummin) was assessed from R 1 attributes like frequency of seed germination, rate of seedling growth, chromosomal anomalies and sterility types, following exposures of dry dormant seed samples (1.8 % moisture content) to 5 KR, 10 KR, 20 KR, 30 KR, 40 KR, 50 KR and 60 KR of γ-irradiations. Results indicated that gamma radiations have induced both physiological and chromosomal disturbances. LD 50 was found to lie between 20 KR and 30 KR of γ-ray. Treatments beyond 30 KR of irradiation were found to be lethal due to complete failure of emergence of seedlings in the field conditions; although 5 KR has shown stimulation in mitotic index. Sterility types have possibly appeared as an outcome of meiotic disturbances. (author)

  12. African Journal of Biotechnology - Vol 10, No 37 (2011)

    African Journals Online (AJOL)

    Isolation and biochemical characterizations of the bacteria (Acidovorax avenae subsp. avenae) associated with red stripe disease of sugarcane · EMAIL FREE FULL TEXT EMAIL FREE FULL TEXT · DOWNLOAD FULL TEXT DOWNLOAD FULL TEXT. S Zia-ul-Hussnain, MI Haque, SM Mughal, KN Shah, A Irfan, S Afghan, ...

  13. Assessing the variability of Red Stripe Disease in Louisiana sugarcane using precision agriculture methods

    Science.gov (United States)

    Symptoms of red stripe disease caused by Acidovorax avenae subsp. avenae in Louisiana between 1985 and 2010 were limited to the leaf stripe form which caused no apparent yield loss. During 2010, the more severe top rot form was observed, and a study was initiated to investigate the distribution of r...

  14. Isolation and Characterization of Seed-Borne Pathogenic Bacteria

    African Journals Online (AJOL)

    Acidovorax avenae subsp. avenae, the causal agent of brown stripe was detected in 63% of the seed samples tested indicat- ing that this pathogen is widely distributed in Tanzania. Other pathogens identified were Pantoea agglomerans causing palea brpwning, Xanthomonas oryzae pv. oryzae causing bacterial blight and.

  15. Feeding and multiplication of three cereal aphid species and their effect on yield of winter wheat

    NARCIS (Netherlands)

    Vereijken, P.H.

    1979-01-01

    Sitobion avenae F. multiplies at a higher rate on winter wheat than Rhopalosiphum padi L. and Metopolophium dirhodum Wlk. Unlike the other two species S. avenae prefers the ear, where it multiplies twice as quickly as on the flag leaf. Infestation of the ear rather than of the leaves leads to

  16. NCBI nr-aa BLAST: CBRC-XTRO-01-0456 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-XTRO-01-0456 ref|YP_969157.1| inner-membrane translocator [Acidovorax avenae s...ubsp. citrulli AAC00-1] gb|ABM31383.1| inner-membrane translocator [Acidovorax avenae subsp. citrulli AAC00-1] YP_969157.1 1e-136 77% ...

  17. NCBI nr-aa BLAST: CBRC-XTRO-01-0649 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-XTRO-01-0649 ref|YP_969649.1| inner-membrane translocator [Acidovorax avenae s...ubsp. citrulli AAC00-1] gb|ABM31875.1| inner-membrane translocator [Acidovorax avenae subsp. citrulli AAC00-1] YP_969649.1 1e-147 89% ...

  18. NCBI nr-aa BLAST: CBRC-CBRE-01-1545 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CBRE-01-1545 ref|YP_970602.1| inner-membrane translocator [Acidovorax avenae s...ubsp. citrulli AAC00-1] gb|ABM32828.1| inner-membrane translocator [Acidovorax avenae subsp. citrulli AAC00-1] YP_970602.1 1e-73 59% ...

  19. China’s Defense Industry on the Path of Reform

    Science.gov (United States)

    2009-10-01

    both are affiliated with a UK-based company called Avena that provides shipbuilders around the world with software and database programs. Avena’s...MARIC website and Medeiros, 119. 80 “Tribon M3 Supports the Complete Shipbuilding Process. From Concept to Delivery.” Avena brochure, available at

  20. NCBI nr-aa BLAST: CBRC-CJAC-01-1605 [SEVENS

    Lifescience Database Archive (English)

    Full Text Available CBRC-CJAC-01-1605 ref|YP_970279.1| Collagen triple helix repeat [Acidovorax avenae ...subsp. citrulli AAC00-1] gb|ABM32505.1| Collagen triple helix repeat [Acidovorax avenae subsp. citrulli AAC00-1] YP_970279.1 2e-07 31% ...