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Sample records for autoradiography species differences

  1. Discrete mapping of brain Mu and delta opioid receptors using selective peptides: Quantitative autoradiography, species differences and comparison with kappa receptors

    Energy Technology Data Exchange (ETDEWEB)

    Sharif, N.A.; Hughes, J. (Addenbrookes Hospital Site, Cambridge (England))

    1989-05-01

    The opioid peptides, (3H)DAGO and (3H)DPDPE, bound to rat and guinea pig brain homogenates with a high, nanomolar affinity and to a high density of mu and delta receptors, respectively. (3H)DAGO binding to mu receptors was competitively inhibited by unlabelled opioids with the following rank order of potency: DAGO greater than morphine greater than DADLE greater than naloxone greater than etorphine much greater than U50488 much greater than DPDPE. In contrast, (3H)DPDPE binding to delta receptors was inhibited by compounds with the following rank order of potency: DPDPE greater than DADLE greater than etorphine greater than dynorphin(1-8) greater than naloxone much greater than U50488 much greater than DAGO. These profiles were consistent with specific labelling of the mu and delta opioid receptors, respectively. In vitro autoradiographic techniques coupled with computer-assisted image analyses revealed a discrete but differential anatomical localization of mu and delta receptors in the rat and guinea pig brain. In general, mu and delta receptor density in the rat exceeded that in the guinea pig brain and differed markedly from that of kappa receptors in these species. However, while mu receptors were distributed throughout the brain with hotspots in the fore-, mid- and hindbrain of the two rodents, the delta sites were relatively diffusely distributed, and were mainly concentrated in the forebrain with particularly high levels within the olfactory bulb (OB), n. accumbens and striatum. Notable regions of high density of mu receptors in the rat and guinea pig brain were the accessory olfactory bulb, striatal patches and streaks, amygdaloid nuclei, ventral hippocampal subiculum and dentate gyrus, numerous thalamic nuclei, geniculate bodies, central grey, superior and inferior colliculi, solitary and pontine nuclei and s. nigra.

  2. Discrimination of chromosome by autoradiography

    International Nuclear Information System (INIS)

    Masubuchi, Masanori

    1975-01-01

    This paper describes discrimination of chromosome by autoradiography. In this method, the difference in DNA synthetic phase between each chromosome was used as a standard, and the used chromosome was in metaphase, as morphological characteristics were markedly in this phase. Cell cycle and autoradiography with 3 H-thymidine were also examined. In order to discriminate chromosome by autoradiography, it was effective to utilize the labelled pattern in late DNA synthetic phase, where asynchronous replication of chromosome appeared most obviously. DNA synthesis in chromosome was examined in each DNA synthetic phase by culturing the chromosome after the treatment with 3 H-thymidine and altering the time to prepare chromosome specimen. Discrimination of chromosome in plants and animals by autoradiography was also mentioned. It was noticed as a structural and functional discrimination of chromosome to observe amino acid uptake into chromosome protein and to utilize the difference in labelled pattern between the sites of chromosome. (K. Serizawa)

  3. Boron concentration measurements by alpha spectrometry and quantitative neutron autoradiography in cells and tissues treated with different boronated formulations and administration protocols.

    Science.gov (United States)

    Bortolussi, Silva; Ciani, Laura; Postuma, Ian; Protti, Nicoletta; Luca Reversi; Bruschi, Piero; Ferrari, Cinzia; Cansolino, Laura; Panza, Luigi; Ristori, Sandra; Altieri, Saverio

    2014-06-01

    The possibility to measure boron concentration with high precision in tissues that will be irradiated represents a fundamental step for a safe and effective BNCT treatment. In Pavia, two techniques have been used for this purpose, a quantitative method based on charged particles spectrometry and a boron biodistribution imaging based on neutron autoradiography. A quantitative method to determine boron concentration by neutron autoradiography has been recently set-up and calibrated for the measurement of biological samples, both solid and liquid, in the frame of the feasibility study of BNCT. This technique was calibrated and the obtained results were cross checked with those of α spectrometry, in order to validate them. The comparisons were performed using tissues taken form animals treated with different boron administration protocols. Subsequently the quantitative neutron autoradiography was employed to measure osteosarcoma cell samples treated with BPA and with new boronated formulations. © 2013 Published by Elsevier Ltd.

  4. Investigation of element contents of natural diamond crystals of different gemological features by INAA and autoradiography

    International Nuclear Information System (INIS)

    Khamrayeva, D.S.; Ulugmuradov, S.; Didyk, A.Y.; Gasanov, M.; Solodova, J.P.; Sedova, E.A.

    2004-01-01

    Full text: The work presented aims at understanding the role of Co, Ni, Ti, Cr, Mn, Cu impurities on the natural diamond ( Type Ι ) quality, microstructure and morphology having different gemological features for identification their deposit. An according of the Kimberly Process there is Certification Scheme for regulating trade in diamonds to exclude 'bloody' diamonds. The 'four C's' criteria (color, clarity, carat weight, cut) had for decades been used by gemologists worldwide to evaluate precious gem diamonds. Those four parameters were believed to determine the value of the stones. Some 10 years ago gemologists added to those traditional criteria a fifth C, signifying Confidence. The role of the fifth C in pricing precious stones increased over time. An according of the Kimberly Process it is necessary to determine diamond deposit. Impurity content of natural diamonds is basic feature to for identification their deposit. We have used autoradiographic technique for investigation of spatial impurity distributions in natural diamond crystals. It is based on the secondary beta irradiation registration. Impurities were identified by energy lines of the gamma spectra obtained and by half-life periods. We bring information which allow to clarify the spatial distributions of Co, Ni, Ti, Cr, Mn, Cu impurities depended inner morphology of diamond crystal. It was established several types of impurity distributions depending from inner morphology of diamond crystals. Results of INAA and autoradiographic study of natural diamonds use for to make of international data for identification their deposit

  5. Whole body autoradiography, ch. 13

    International Nuclear Information System (INIS)

    Jonkman, J.H.G.

    1977-01-01

    The distribution of 35 S-ringlabelled thiazinamium methylsulphate has been studied by means of whole body autoradiography in a squirrel and in mice. Accumulation of activity was found in liver, kidney and intestines (the excretion of pathways). High concentrations were also found in organs with high amount of acetylcholine receptors and in the glandular tissue. No radioactivity was seen in the central nervous system, indicating no passage through the 'blood-brain barrier'. This is the most significant difference with its tertiary analogue Prometharine hydrochloride. In pregnant mice, high concentrations were found in the placenta but only low amounts were found in liver and kidneys of the foetuses

  6. Autoradiography of metallic matrices

    International Nuclear Information System (INIS)

    Keller, N.A.

    1982-04-01

    One of the container designs being considered for the disposal of irradiated CANDU fuel bundles consists of a cylindrical titanium shell approximately 1.10 m in height and 0.84 m in diameter, into which is placed a basket fabricated from a close-packed array of thirty-seven 10 cm (4 in.) schedule 40 steel pipes. Two fuel bundles would be stacked into all but the central pipe, and the entire container filled with a low melting point metal. There is concern that shrinkage during solidification of this metal matrix may result in voids being present in the matrix near the outer shell of the container. One of the methods being considered to determine the presence of such voids is autoradiography. A theoretical study was carried out to determine the limitations of this technique. The results are discussed in detail in this report. It is concluded that while autoradiography appears feasible, it will require using a complex multi-detector system to detect voids of a reasonable size

  7. Autoradiography in pharmacology and toxicology

    International Nuclear Information System (INIS)

    Anon.

    1977-01-01

    81 abstracts on autoradiography in pharmacology and toxicology were presented, divided into six sessions concerning: 1) methods 2) hormones and receptors, 3) drugs, 4) toxicology, 5) metals, 6) fetal distribution. (author)

  8. Autoradiography as a safeguards technique

    International Nuclear Information System (INIS)

    Brumbach, S.B.

    1978-01-01

    Autoradiography gives a simultaneous piece count and attribute check for special nuclear material without, however, a quantitative measurement of fissile material. Applications to fuel elements containing plutonium for fast critical assemblies or uranium for LWRs are discussed. 15 figures

  9. ³H-deprenyl and ³H-PIB autoradiography show different laminar distributions of astroglia and fibrillar β-amyloid in Alzheimer brain.

    Science.gov (United States)

    Marutle, Amelia; Gillberg, Per-Göran; Bergfors, Assar; Yu, Wenfeng; Ni, Ruiqing; Nennesmo, Inger; Voytenko, Larysa; Nordberg, Agneta

    2013-07-23

    The pathological features in Alzheimer's disease (AD) brain include the accumulation and deposition of β-amyloid (Aβ), activation of astrocytes and microglia and disruption of cholinergic neurotransmission. Since the topographical characteristics of these different pathological processes in AD brain and how these relate to each other is not clear, this motivated further exploration using binding studies in postmortem brain with molecular imaging tracers. This information could aid the development of specific biomarkers to accurately chart disease progression. In vitro binding assays demonstrated increased [³H]-PIB (fibrillar Aβ) and [³H]-PK11195 (activated microglia) binding in the frontal cortex (FC) and hippocampus (HIP), as well as increased binding of [³H]-L-deprenyl (activated astrocytes) in the HIP, but a decreased [³H]-nicotine (α4β2 nicotinic acetylcholine receptor (nAChR)) binding in the FC of AD cases compared to age-matched controls. Quantitative autoradiography binding studies were also performed to investigate the regional laminar distributions of [³H]-L-deprenyl, [³H]-PIB as well as [¹²⁵I]-α-bungarotoxin (α7 nAChRs) and [³H]-nicotine in hemisphere brain of a typical AD case. A clear lamination pattern was observed with high [³H]-PIB binding in all layers and [³H]-deprenyl in superficial layers of the FC. In contrast, [³H]-PIB showed low binding to fibrillar Aβ, but [³H]-deprenyl high binding to activated astrocytes throughout the HIP. The [³H]-PIB binding was also low and the [³H]-deprenyl binding high in all layers of the medial temporal gyrus and insular cortex in comparison to the frontal cortex. Low [³H]-nicotine binding was observed in all layers of the frontal cortex in comparison to layers in the medial temporal gyrus, insular cortex and hippocampus. Immunohistochemical detection in the AD case revealed abundant glial fibrillary acidic protein positive (GFAP+) reactive astrocytes and α7 nAChR expressing GFAP

  10. Digital image analyser for autoradiography

    International Nuclear Information System (INIS)

    Muth, R.A.; Plotnick, J.

    1985-01-01

    The most critical parameter in quantitative autoradiography for assay of tissue concentrations of tracers is the ability to obtain precise and accurate measurements of optical density of the images. Existing high precision systems for image analysis, rotating drum densitometers, are expensive, suffer from mechanical problems and are slow. More moderately priced and reliable video camera based systems are available, but their outputs generally do not have the uniformity and stability necessary for high resolution quantitative autoradiography. The authors have designed and constructed an image analyser optimized for quantitative single and multiple tracer autoradiography which the authors refer to as a memory-mapped charged-coupled device scanner (MM-CCD). The input is from a linear array of CCD's which is used to optically scan the autoradiograph. Images are digitized into 512 x 512 picture elements with 256 gray levels and the data is stored in buffer video memory in less than two seconds. Images can then be transferred to RAM memory by direct memory-mapping for further processing. Arterial blood curve data and optical density-calibrated standards data can be entered and the optical density images can be converted automatically to tracer concentration or functional images. In double tracer studies, images produced from both exposures can be stored and processed in RAM to yield ''pure'' individual tracer concentration or functional images. Any processed image can be transmitted back to the buffer memory to be viewed on a monitor and processed for region of interest analysis

  11. Differences in replicon behavior between x-irradiation-sensitive L5178Y mouse lymphoma cells and A-T fibroblasts using DNA fiber autoradiography

    International Nuclear Information System (INIS)

    Ockey, C.H.

    1983-01-01

    Replicon behavior in radiosensitive Ataxia telangiectasia (A-T) fibroblasts and mouse lymphoma L5178Y (LS) cells was studied by DNA fiber autoradiography. LS cells, irradiated at 13 Gy, showed a similar reduction in rate of DNA chain growth and initiation of replicons as did resistant (LR) cells. A progressive increase in the intensity of [ 3 H]TdR labeling of many replicons was observed after irradition in the LS cells, but not in LR cells. This indicated a reduced or absent endogenous dTTP supply after irradiation in the LS cells, implicating a defect in nucleoside precursor production. Irradiated normal human and A-T cells did not show this effect. After 2 Gy, the frequency of initiation of replicons into synthesis was temporarily reduced in the normal human but not in the A-T cells. After 20 Gy, the rate of DNA chain growth was preferentially reduced in the normal human cells, but an increase was observed in the A-T cells. This increased rate could be explained in terms of a normal supply of complexes involved in chain elongation being distributed over a reduced number of initiated replicon clusters in the A-T cells

  12. Alpha autoradiography by cellulose nitrate layer

    International Nuclear Information System (INIS)

    Simonovic, J.; Vukovic, J.; Antanasijevic, R.

    1977-01-01

    From domestic cellulose nitrate bulk material thin layers for α-particle autoradiography were prepared. An artificial test specimen of a uniformly alpha labelled grid source was used. The efficiency of autoradiography by cellulose nitrate was calculated comparing with data from an Ilford K2 nuclear emulsion exposed under the same conditions as the cellulose nitrate film. The resolution was determined as the distance from grid pitch edge at which the track density fell considerably. (Auth.)

  13. Brain banking for immunocytochemistry and autoradiography

    International Nuclear Information System (INIS)

    Eymin, C.; Jordan, D.; Saint-Pierre, G.; Kopp, N.

    1993-01-01

    The aim of a human brain bank is to establish groups of matched brains (normal control versus pathological groups) for studying human diseases of the nervous system. This bank is obtained by means of autopsy performed with a very short post-mortem delay and from clinically and neuropathologically well-documented patients. According to research protocols, two types of brain tissue storage are performed: fixed tissue or frozen tissue. Brain dissection procedures are performed according to precise anatomical boundaries of each brain region. This paper will center on the questions raised by brain banking in relation to histological and immunocytochemical studies and to biochemistry and autoradiography of binding sites. The lack of neuroanatomical data of the human brain leads us to compare anatomical results obtained in animals to that of the human. Moreover, it is clear that human brains present numerous interindividual differences (Kopp et al., 1977; Jack et al., 1989). Therefore, investigations of the human brain should be made on a large series of brains indicating the necessity of a well-documented brain bank of tissue from normal controls and patients. (authors)

  14. Autoradiography of 90Sr in developing rats

    International Nuclear Information System (INIS)

    Olsen, I.; Jonsen, J.

    1979-01-01

    The distribution patterns of 90 Sr in five littermate, 8-day-old Wistar rats were studied by whole body autoradiography. Rats were killed 15 min, 1, 4, 24, and 72 h after a single intraperitoneal injection of the isotope. Immediately after administration, 90 Sr was distributed throughout most of the soft tissues of the body. The soft tissue deposits had practically disappeared after 4 h. In the hard tissues of the body 90 Sr accumulated up to 24-72 h. Fifteen minutes after injection the uptake of 90 Sr in the enamel of the teeth was highest in the occlusal and incisal regions. 90 Sr gradually accumulated throughout the enamel and after 72 h its distribution in this layer was fairly uniform. Immediately after injection a narrow zone of radioactivity appeared in the dentin near the pulp. This zone broadened with time towards the dentinoenamel junction and included the intire dentin layer 72 h after injection. Initially, the uptake of 90 Sr was higher in the dentin than in the enamel, particularly in the cervical areas of the crown. This difference became less apparent with time. There was good correlation between the uptake in the teeth and bones, supporting the use of teeth as indicators of the 90 Sr body burden. (author)

  15. Two views of functional mapping and autoradiography

    International Nuclear Information System (INIS)

    McEachron, D.L.; Adler, N.T.; Tretiak, O.J.

    1986-01-01

    This chapter is meant to serve as an initial introduction into the use and analysis of functional mapping with radiotracers and film autoradiography. The first section describes functional autoradiography from a biologist's point of view, reviewing the advantages of radiotracers for bridging the gap between behavior and neurophysiology. The physical and chemical assumptions underlying the use of radiotracers in biological systems are then examined. The second section looks at the autoradiogram from an engineering standpoint and investigates how the basic physics of radioactive decay influences the measured parameters of autoradiographs. The problems of video densitometry and the quantification of optical density and isotope concentrations are discussed

  16. A study of the seasonal dynamics of three phycoperiphytic communities using nuclear track autoradiography. Pt. 1

    International Nuclear Information System (INIS)

    Pip, E.; Robinson, G.G.C.

    1982-01-01

    Net inorganic carbon uptake was examined for algal periphytic communities on Potamogeton richardsonii, P. praelongus and P. zosteriformis in a shallow lake. Nuclear track autoradiography was used to examine uptake for individual taxa comprising the communities. Net uptake rates per unit cell surface area were strongly correlated during the season for certain algal taxa, particularly diatoms, on the same macrophyte. The correlated taxa formed a different correlation cluster for each macrophyte. Although several of the same algal taxa appeared in the correlation clusters for different macrophytes, the behavior of a given taxon was only rarely correlated on different macrophytes. Each cluster behaved as an independent unit. Such organized behavior may be important in algal succession. Principal component analysis of the species-time uptake matrix isolated 3 main principal components that accounted for > 95% of the seasonal variation on all 3 macrophytes. (orig.)

  17. Genome size differences in Hyalella cryptic species.

    Science.gov (United States)

    Vergilino, Roland; Dionne, Kaven; Nozais, Christian; Dufresne, France; Belzile, Claude

    2012-02-01

    The Hyalella azteca (Saussure) complex includes numerous amphipod cryptic species in freshwater habitats in America as revealed by DNA barcoding surveys. Two ecomorphs (small and large) have evolved numerous times in this complex. Few phenotypic criteria have been found to differentiate between the numerous species of this complex. The present study aims to explore genome size differences between some species of the H. azteca complex co-occurring in a Canadian boreal lake using flow cytometry. Nuclear DNA content was estimated for 50 individuals belonging to six COI haplotypes corresponding to four provisional species of the H. azteca complex. Species from the large ecomorph had C-values significantly larger than species from the small ecomorph, whereas slight differences were found among species of the small ecomorph. These differences in genome sizes might be linked to ecological and physiological differences among species of the H. azteca complex.

  18. Digital autoradiography technique for studying of spatial Impurity distributions Delara

    International Nuclear Information System (INIS)

    Khamrayeva, S.

    2001-01-01

    In this report, the possibilities of the digital image processing for autoradiographic investigations of impurity distributions in the different objects (crystals, biology, geology et al) are shown. Activation autoradiography based on the secondary beta-irradiation is the method spread widely for investigations of the spatial distribution of chemical elements in the different objects. The analysis of autoradiography features is connected with the elucidation of optical density distribution of photoemulsion by means of photometry. The photoemulsion is used as detector of secondary beta irradiation. For different technological and nature materials to have elemental shifts the fine structure of chemical element distribution is often interested. But photometry makes it difficult to study the inhomogeneous chemical elements with the little gradient of concentration (near 20%). Therefore, the suppression of the background and betterment of linear solvability are the main problems of autoradiographic analysis. Application of the fast-acting digital computers and the technical means of signals treatment are allowed to spread the possibilities and the resolution of activation autoradiography. Mechanism of creation of autoradiographic features is described. The treatment of autoradiograms was conducted with the help of the dialogue system having matrix in 512 x 512 elements. For the interpretation of the experimental data clustering analysis methodology was used. Classification of the zones on the minimum of the square mistake was conducted according to the data of histograms of the optical densities of the studying autoradiograms. It was proposed algorithm for digital treatment for reconstruction of autoradiographic features. At a minimal contrast the resolution of the method has been enhanced on the degree by adaptation of methods of digital image processing (DIP) to suppress background activity. Results of the digital autoradiographic investigations of spatial impurity

  19. Digital autoradiography using silicon strip detectors

    Energy Technology Data Exchange (ETDEWEB)

    Overdick, M.

    1998-05-01

    Spatially resolving radiation detection systems operating in real time can be used to acquire autoradiographic images. An overview over alternatives to traditional autoradiography is given and the special features of these filmless methods are discussed. On this basis the design of a system for digital autoradiography using silicon strip detectors is presented. Special emphasis is put on the physical background of the detection process in the semiconductor and on the self-triggering read-out technique. The practical performance of the system is analyzed with respect to energy and spatial resolution. This analysis is complemented by case studies from cell biology (especially electrophoresis), botany and mineralogy. Also the results from a time-resolved autoradiographic experiment are presented. (orig.) 80 refs.

  20. Alpha autoradiography by cellulose nitrate layer

    International Nuclear Information System (INIS)

    Simonovic, J.; Vukovic, J.; Antanasijevic, R.

    1976-01-01

    From domestic cellulose nitrate bulk material thin layers for α-particle autoradiography were prepared. An artifical test specimen of a uniformly alpha labelled grid source was used. The efficiency of autoradiographs by cellulose nitrate was calculated comparing with data from an Ilford K2 nuclear emulsion exposed under the same conditions as the cellulose nitrate film. The resolution was determined as the distance from grid pitch edge at which the track density fell considerably. (orig.) [de

  1. Species differences in 3-methylsulphonyl-DDE bioactivation by adrenocortical tissue.

    Science.gov (United States)

    Lindström, Veronica; Brandt, Ingvar; Lindhe, Orjan

    2008-03-01

    The CYP11B1-activated adrenocortical toxicant 3-methylsulphonyl-DDE (3-MeSO2-DDE) is proposed as a lead compound for an improved chemotherapy for adrenocortical carcinoma. We compared the binding of 3-MeSO2-[14C]DDE in the adrenal cortex of four rodent species; hamster, guinea pig, mouse and rat, using a precision-cut adrenal slice culture system ex vivo. Localization and quantification of the bound radioactivity were carried out using light microscopy autoradiography and radioluminography. The results revealed major species differences since 3-MeSO2-[14C]DDE was extensively bound to the hamster adrenal tissue while the guinea pig adrenals were devoid of binding. A high binding in mouse adrenal cortex was confirmed while binding in rat adrenal cortex was very weak. The results support previous observations that metabolic activation of 3-MeSO2-DDE is highly species dependent. Since CYP11B1 could be expressed in tissues other than the adrenal cortex, final toxicological characterization should be carried out in a species that can bioactivate this compound.

  2. Species differences in the metabolism of benzene

    Energy Technology Data Exchange (ETDEWEB)

    Henderson, R.F. [Inhalation Toxicology Research Institute, Albuquerque, NM (United States)

    1996-12-01

    The pathways of metabolism of benzene appear to be qualitatively similar in all species studied thus far. However, there are quantitative differences in the fraction of benzene metabolized by the different pathways. These species differences become important for risk assessments based on animal data. Mice have a greater overall capacity to metabolize benzene than rats or primates, based on mass balance studies conducted in vivo using radiolabled benzene. Mice and monkeys metabolize more of the benzene to hydroquinone metabolites than do rats or chimpanzees, especially at low doses. Nonhuman primates metabolize less of the benzene to muconic acid than do rodents or humans. In all species studied, a greater proportion of benzene is converted to hydroquinone and ring-breakage metabolites at low doses than at high doses. This finding should be considered in attempting to extrapolate the toxicity of benzene observed at high doses to predicted toxicity at low doses. Because ring-breakage metabolites and hydroquinone have both been implicated in the toxicity of benzene, the higher formation of those metabolites in the mouse may partially explain why mice are more sensitive to benzene than are rats. Metabolism of benzene in humans, the species of interest, does not exactly mimic that of any animal species studied. More information on the urinary and blood metabolites of occupationally exposed people is required to determine the fractional conversion of benzene to putative toxic metabolites and the degree of variability present in human subjects. 12 refs., 4 tabs.

  3. Evaluation of micro-homogeneity in plutonium based nuclear reactor fuel pellets by alpha-autoradiography technique

    Energy Technology Data Exchange (ETDEWEB)

    Baghra, Chetan, E-mail: chetanbaghra.barc@gmail.com [Advanced Fuel Fabrication Facility (AFFF), Bhabha Atomic Research Center, Tarapur Complex, Maharashtra, 401502 (India); Sathe, D.B.; Sharma, Jitender; Walinjkar, Nilima; Behere, P.G.; Afzal, Mohd [Advanced Fuel Fabrication Facility (AFFF), Bhabha Atomic Research Center, Tarapur Complex, Maharashtra, 401502 (India); Kumar, Arun [Radiometallurgy Division, Bhabha Atomic Research Center, Trombay, Maharashtra, 400094 (India)

    2015-12-15

    Alpha-autoradiography is a fast and non-destructive technique which is used at Advanced Fuel Fabrication Facility (India) to evaluate micro-homogeneity of plutonium in uranium and plutonium mixed oxide (U–Pu)O{sub 2} fuel pellets fabricated for both thermal and fast breeder reactors. In this study, various theoretical calculations to understand effect of alpha autoradiography process parameters and limiting conditions for measuring micro-homogeneity of plutonium in the pellets having different concentrations of plutonium were reported. Experiments were carried out to establish the procedure to evaluate micro-homogeneity of plutonium in (U-x%Pu)O{sub 2} pellets where x varies from 0.4 to 44% and to measure the size of agglomerates, if any, present in the pellet. An attempt had been made to measure plutonium content in the agglomerate using alpha-autoradiography. This study can also be useful for carrying out alpha-autoradiography of spent fuel pellets during post-irradiation examination. - Highlights: • Alpha-Autoradiography of (U–Pu)O{sub 2} oxide pellet having 0.4–44% PuO{sub 2} was done. • Exposure and etching time required for alpha-autoradiography was optimized. • Size of Pu agglomerate was measured using micro-homogeneity profiling.

  4. 13th international symposium on autoradiography (13th ISA '83)

    International Nuclear Information System (INIS)

    Strba, J.

    1983-01-01

    At the conference, 39 papers were heard all of which are included in INIS. Topics covered include: trends in development of solid state track detectors, theory and methods of quantitative autoradiography, equipment for autoradiographs processing and track counting, uses of autoradiography in research of semiconductors, in metallography and in biology

  5. Actinide bioimaging in tissues: Comparison of emulsion and solid track autoradiography techniques with the iQID camera.

    Directory of Open Access Journals (Sweden)

    Stephanie Lamart

    Full Text Available This work presents a comparison of three autoradiography techniques for imaging biological samples contaminated with actinides: emulsion-based, plastic-based autoradiography and a quantitative digital technique, the iQID camera, based on the numerical analysis of light from a scintillator screen. In radiation toxicology it has been important to develop means of imaging actinide distribution in tissues as these radionuclides may be heterogeneously distributed within and between tissues after internal contamination. Actinide distribution determines which cells are exposed to alpha radiation and is thus potentially critical for assessing absorbed dose. The comparison was carried out by generating autoradiographs of the same biological samples contaminated with actinides with the three autoradiography techniques. These samples were cell preparations or tissue sections collected from animals contaminated with different physico-chemical forms of actinides. The autoradiograph characteristics and the performances of the techniques were evaluated and discussed mainly in terms of acquisition process, activity distribution patterns, spatial resolution and feasibility of activity quantification. The obtained autoradiographs presented similar actinide distribution at low magnification. Out of the three techniques, emulsion autoradiography is the only one to provide a highly-resolved image of the actinide distribution inherently superimposed on the biological sample. Emulsion autoradiography is hence best interpreted at higher magnifications. However, this technique is destructive for the biological sample. Both emulsion- and plastic-based autoradiography record alpha tracks and thus enabled the differentiation between ionized forms of actinides and oxide particles. This feature can help in the evaluation of decorporation therapy efficacy. The most recent technique, the iQID camera, presents several additional features: real-time imaging, separate imaging of

  6. Actinide bioimaging in tissues: Comparison of emulsion and solid track autoradiography techniques with the iQID camera.

    Science.gov (United States)

    Lamart, Stephanie; Miller, Brian W; Van der Meeren, Anne; Tazrart, Anissa; Angulo, Jaime F; Griffiths, Nina M

    2017-01-01

    This work presents a comparison of three autoradiography techniques for imaging biological samples contaminated with actinides: emulsion-based, plastic-based autoradiography and a quantitative digital technique, the iQID camera, based on the numerical analysis of light from a scintillator screen. In radiation toxicology it has been important to develop means of imaging actinide distribution in tissues as these radionuclides may be heterogeneously distributed within and between tissues after internal contamination. Actinide distribution determines which cells are exposed to alpha radiation and is thus potentially critical for assessing absorbed dose. The comparison was carried out by generating autoradiographs of the same biological samples contaminated with actinides with the three autoradiography techniques. These samples were cell preparations or tissue sections collected from animals contaminated with different physico-chemical forms of actinides. The autoradiograph characteristics and the performances of the techniques were evaluated and discussed mainly in terms of acquisition process, activity distribution patterns, spatial resolution and feasibility of activity quantification. The obtained autoradiographs presented similar actinide distribution at low magnification. Out of the three techniques, emulsion autoradiography is the only one to provide a highly-resolved image of the actinide distribution inherently superimposed on the biological sample. Emulsion autoradiography is hence best interpreted at higher magnifications. However, this technique is destructive for the biological sample. Both emulsion- and plastic-based autoradiography record alpha tracks and thus enabled the differentiation between ionized forms of actinides and oxide particles. This feature can help in the evaluation of decorporation therapy efficacy. The most recent technique, the iQID camera, presents several additional features: real-time imaging, separate imaging of alpha particles and

  7. Species differences in pharmacokinetics and drug teratogenesis

    Energy Technology Data Exchange (ETDEWEB)

    Nau, H.

    1986-12-01

    Interspecies differences in regard to the teratogenicity of drugs can be the result of differing pharmacokinetic processes that determine the crucial concentration-time relationships in the embryo. Maternal absorption, as well as distribution, of the drugs does not usually show great species differences. The first-pass effect after oral application is often more pronounced in animals than man (e.g., valproic acid, 13-cis-retinoic acid), although in some cases the reverse was found (e.g., hydrolysis of valpromide). Existing differences can be adjusted by appropriate choice of the administration route and measurements of drug levels. Many variables determine the placental transfer of drugs: developmental stage, type of placenta, properties of the drug. Even closely related drugs (e.g., retinoids) may differ greatly in regard to placental transfer. Maternal protein binding is an important determinant of placental transfer, since only the free concentration in maternal plasma can equilibrate with the embryo during organogenesis; this parameter differs greatly across species. Laboratory animals usually have a much higher rate of drug elimination than man. Drastic drug level fluctuations are therefore present during teratogenicity testing in animals, but not to do the same degree in human therapy. It must, therefore, be investigated if peak concentrations (such as for valproic acid and possibly caffeine) or the area under the concentration-time curve (AUC) (such as for cyclophosphamide and possibly retinoids) correlate with the teratogenic response. Only then is a rational and scientific basis for interspecies comparison possible. It is concluded that the prediction of the human response based on animal studies can be improved by consideration of the appropriate pharmacokinetic determinants.

  8. Species Differences Take Shape at Nanoparticles

    DEFF Research Database (Denmark)

    Hayashi, Yuya; Miclaus, Teodora; Scavenius, Carsten

    2013-01-01

    Cells recognize the biomolecular corona around a nanoparticle, but the biological identity of the complex may be considerably different among various species. This study explores the importance of protein corona composition for nanoparticle recognition by coelomocytes of the earthworm Eisenia...... fetida using E. fetida coelomic proteins (EfCP) as a native repertoire and fetal bovine serum (FBS) as a non-native reference. We have profiled proteins forming the long-lived corona around silver nanoparticles (75 nm OECD reference materials) and compared the responses of coelomocytes to protein coronas...

  9. Some examples of the utilization of autoradiography in metallurgy

    International Nuclear Information System (INIS)

    Faraggi, H.

    1959-01-01

    Although autoradiography has been used for a long time for metallurgic studies, new possibilities are open by a full exploitation of recent progress in nuclear emulsion techniques. A few examples are presented. (author) [fr

  10. Inhibition of tissue angiotensin converting enzyme. Quantitation by autoradiography

    International Nuclear Information System (INIS)

    Sakaguchi, K.; Chai, S.Y.; Jackson, B.; Johnston, C.I.; Mendelsohn, F.A.

    1988-01-01

    Inhibition of angiotensin converting enzyme (ACE) in serum and tissues of rats was studied after administration of lisinopril, an ACE inhibitor. Tissue ACE was assessed by quantitative in vitro autoradiography using the ACE inhibitor [ 125 I]351A, as a ligand, and serum ACE was measured by a fluorimetric method. Following oral administration of lisinopril (10 mg/kg), serum ACE activity was acutely reduced but recovered gradually over 24 hours. Four hours after lisinopril administration, ACE activity was markedly inhibited in kidney (11% of control level), adrenal (8%), duodenum (8%), and lung (33%; p less than 0.05). In contrast, ACE in testis was little altered by lisinopril (96%). In brain, ACE activity was markedly reduced 4 hours after lisinopril administration in the circumventricular organs, including the subfornical organ (16-22%) and organum vasculosum of the lamina terminalis (7%; p less than 0.05). In other areas of the brain, including the choroid plexus and caudate putamen, ACE activity was unchanged. Twenty-four hours after administration, ACE activity in peripheral tissues and the circumventricular organs of the brain had only partially recovered toward control levels, as it was still below 50% of control activity levels. These results establish that lisinopril has differential effects on inhibiting ACE in different tissues and suggest that the prolonged tissue ACE inhibition after a single oral dose of lisinopril may reflect targets involved in the hypotensive action of ACE inhibitors

  11. MEKC analysis of different Echinacea species.

    Science.gov (United States)

    Pietta, P; Mauri, P; Bauer, R

    1998-10-01

    The distribution pattern of caffeic acid derivatives in Echinacea species is complex, and problems with the identity of each drug have been recognized. Micellar electrokinetic chromatography (MEKC) has been applied to define the fingerprints of Echinacea angustifolia, Echinacea pallida, and Echinacea purpurea, and their mixtures. The results obtained evidence that MEKC is a valuable tool for the characterization of these drugs.

  12. The jellyfish and its polyp: a comparative study of gene expression monitored by the protein patterns, using two-dimensional gels with double-label autoradiography.

    Science.gov (United States)

    Bally, A; Schmid, V

    1988-03-01

    The life cycle of Podocoryne carnea (Coelenterata, Anthomedusae) shows several distinct stages which differ considerably in terms of their ecology, morphology, cellular composition, and ultrastructure. Previously these stages had even been described as separate species. Using two-dimensional gel electrophoresis and a new method of double-label autoradiography, we show here for the first time for metagenic hydrozoans that only minor differences in gene expression exist between the various life cycle stages. Our results demonstrate the high resolution power of these techniques and show that the different life stages of P. carnea remain rather similar on the protein level. Most of the prominent spots of the two-dimensional gel protein patterns are common to all stages studied. These data show that the hydrozoan life cycle and development are regulated by only minor distinctions in gene expression which possibly explains the great morphogenetic repertoire of these animals described in many studies.

  13. Neutron radiography and neutron-induced autoradiography for the classroom

    International Nuclear Information System (INIS)

    Aderhold, H.C.

    1992-01-01

    The Cornell 500-kW MARK II TRIGA reactor at the Ward Laboratory of Nuclear Engineering has been used to illustrate the application of neutron radiography (NR) and neutron-induced autoradiography (NIAR) for solving problems in engineering as well as problems in art history. The applications are described in the paper

  14. Cadmium phytoextraction potential of different Alyssum species

    International Nuclear Information System (INIS)

    Barzanti, R.; Colzi, I.; Arnetoli, M.; Gallo, A.; Pignattelli, S.; Gabbrielli, R.; Gonnelli, C.

    2011-01-01

    Highlights: ► The possibility of using serpentine plants for phytoextraction of Cd was investigated. ► Variation in Cd tolerance, accumulation and translocation in three Alyssum plants with different phenotypes were found. ► Alyssum montanum showed higher Cd tolerance and accumulation than the Ni hyperaccumulator Alyssum bertolonii. ► As for the kinetic parameters of the Cd uptake system, A. montanum presented a low apparent K m value. ► The V max values were not significantly different among the plants. - Abstract: This work was planned for providing useful information about the possibility of using serpentine adapted plants for phytoextraction of cadmium, element scarcely represented in such metalliferous environment. To this aim, we investigated variation in cadmium tolerance, accumulation and translocation in three Alyssum plants with different phenotypes: Alyssum bertolonii, that is a serpentine endemic nickel hyperaccumulator, and two populations of Alyssum montanum, one adapted and one not adapted to serpentine soils. Plants were hydroponically cultivated in presence of increasing concentrations of CdSO 4 for two weeks. For the metal concentration used in the experiments, the three different Alyssum populations showed variation in cadmium tolerance, accumulation and content. The serpentine adapted population of A. montanum showed statistically higher cadmium tolerance and accumulation than A. bertolonii and the population of A. montanum not adapted to serpentine soil thus deserving to be investigated for phytoextraction purposes. Furthermore, as for the kinetic parameters of the cadmium uptake system, A. montanum serpentine population presented a low apparent K m value, suggesting a high affinity for this metal of its uptake system, whereas the V max values were not significantly different among the plants. Present data revealed metallicolous plants are also suitable for the phytoremediation of metals underrepresented in the environment of their

  15. Renal uptake and retention of radiolabeled somatostatin, bombesin, neurotensin, minigastrin and CCK analogues: species and gender differences

    International Nuclear Information System (INIS)

    Melis, Marleen; Krenning, Eric P.; Bernard, Bert F.; Visser, Monique de; Rolleman, Edgar; Jong, Marion de

    2007-01-01

    Introduction: During therapy with radiolabeled peptides, the kidney is most often the critical organ. Newly developed peptides are evaluated preclinically in different animal models before their application in humans. In this study, the renal retention of several radiolabeled peptides was compared in male and female rats and mice. Methods: After intravenous injection of radiolabeled peptides [somatostatin, cholecystokinin (CCK), minigastrin, bombesin and neurotensin analogues], renal uptake was determined in both male and female Lewis rats and C57Bl mice. In addition, ex vivo autoradiography of renal sections was performed to localize accumulated radioactivity. Results: An equal distribution pattern of renal radioactivity was found for all peptides: high accumulation in the cortex, lower accumulation in the outer medulla and no radioactivity in the inner medulla of the kidneys. In both male rats and mice, an increasing renal uptake was found: [ 111 In-DTPA]CCK8 111 In-DTPA-Pro 1 ,Tyr 4 ]bombesin∼[ 111 In-DTPA] neurotensin 111 In-DTPA]octreotide 111 In-DTPA]MG0. Renal uptake of [ 111 In-DTPA]octreotide in rats showed no gender difference, and renal radioactivity was about constant over time. In mice, however, renal uptake in females was significantly higher than that in males and decreased rapidly over time in both genders. Moreover, renal radioactivity in female mice injected with [ 111 In-DTPA]octreotide showed a different localization pattern. Conclusions: Regarding the renal uptake of different radiolabeled peptides, both species showed the same ranking order. Similar to findings in patients, rats showed comparable and constant renal retention of radioactivity in both genders, in contrast to mice. Therefore, rats appear to be the more favorable species for the study of the renal retention of radioactivity

  16. Mapping Bush Encroaching Species by Seasonal Differences in Hyperspectral Imagery

    Directory of Open Access Journals (Sweden)

    Jens Oldeland

    2010-05-01

    Full Text Available Bush encroachment is a form of land degradation prominent worldwide, but particularly present in semi-arid areas. In this study, we mapped the spatial distribution of the two encroacher species, Acacia mellifera and Acacia reficiens,in Central Namibia, based on their different phenological behavior. We used constrained principal curves to extract a one dimensional gradient of phenological change from two hyperspectral images taken in different seasons. Field measurements of species composition and cover values were statistically related to bi-temporal differences in hyperspectral vegetation indices in a direct gradient analysis. The extracted gradient reflected the relationship between species composition and cover values, and the phenological pattern as captured by the image data. Cover values of four dominant plant species were mapped and species responses along the phenological gradient were interpreted.

  17. Coexistence of three different Drosophila species by rescheduling ...

    Indian Academy of Sciences (India)

    Unknown

    We present evidence for coexistence of three different Drosophila species by rescheduling their life history traits in a natural population using the same resource, at the same time and same place. D. ananassae has faster larval develop- ment time (DT) and faster DT(egg-fly) than other two species thus utilizing the ...

  18. Detection of Different DNA Animal Species in Commercial Candy Products.

    Science.gov (United States)

    Muñoz-Colmenero, Marta; Martínez, Jose Luis; Roca, Agustín; Garcia-Vazquez, Eva

    2016-03-01

    Candy products are consumed all across the world, but there is not much information about their composition. In this study we have used a DNA-based approach for determining the animal species occurring in 40 commercial candies of different types. We extracted DNA and performed PCR amplification, cloning and sequencing for obtaining species-informative DNA sequences. Eight species were identified including fish (hake and anchovy) in 22% of the products analyzed. Bovine and porcine were the most abundant appearing in 27 samples each one. Most products contained a mixture of species. Marshmallows (7), jelly-types, and gummies (20) contained a significantly higher number of species than hard candies (9). We demonstrated the presence of DNA animal species in candy product which allow consumers to make choices and prevent allergic reaction. © 2016 Institute of Food Technologists®

  19. Generalized fractional supersymmetry associated to different species of anyons

    International Nuclear Information System (INIS)

    Douari, Jamila; Abdus Salam International Centre for Theoretical Physics, Trieste; Hassouni, Yassine

    2001-01-01

    We consider multiple species of anyons characterized by different statistical parameters. First, we redefine the anyonic algebra and then generalize this definition by constructing the anyonic superalgebra. Finally, we use these tools to generalize the fractional supersymmetry already discussed. (author)

  20. Tree species from different functional groups respond differently to environmental changes during establishment

    NARCIS (Netherlands)

    Barbosa, E.R.M.; Langevelde, van F.; Tomlinson, K.W.; Carvalheiro, L.M.G.R.; Kirkman, K.; Bie, de S.; Prins, H.H.T.

    2014-01-01

    Savanna plant communities change considerably across time and space. The processes driving savanna plant species diversity, coexistence and turnover along environmental gradients are still unclear. Understanding how species respond differently to varying environmental conditions during the seedling

  1. Arsenic and mercury in native aquatic bryophytes: differences among species.

    Science.gov (United States)

    Díaz, Santiago; Villares, Rubén; López, Jesús; Carballeira, Alejo

    2013-04-01

    This study investigated the capacities of five species of aquatic bryophytes to accumulate As and Hg from their natural habitats in rivers in Galicia (NW Spain). The distributions of the concentrations of both elements in all species were skewed to the right, with a higher incidence of extreme values in the As data, which may indicate a greater degree of contamination by this metalloid. There were no significant differences in the accumulation of either of the elements between the different species studied, which justifies their combined use as biomonitors of As and Hg, at least in the study area.

  2. Fish species and size distribution and abundance in different areas ...

    African Journals Online (AJOL)

    Tanzania Journal of Science ... The results show that there were significant differences in catch rates between rainy and dry seasons (F (12, 12) = 2.69; p < 0.05). ... The distribution of the fish species in different areas recorded a significant difference during the dry season (Q = 18.254, df = 8, P < 0.001), while during the rainy ...

  3. Substance P and substance K receptor binding sites in the human gastrointestinal tract: localization by autoradiography

    International Nuclear Information System (INIS)

    Gates, T.S.; Zimmerman, R.P.; Mantyh, C.R.; Vigna, S.R.; Maggio, J.E.; Welton, M.L.; Passaro, E.P. Jr.; Mantyh, P.W.

    1988-01-01

    Quantitative receptor autoradiography was used to localize and quantify the distribution of binding sites for 125 I-radiolabeled substance P (SP), substance K (SK) and neuromedin K (NK) in the human GI tract using histologically normal tissue obtained from uninvolved margins of resections for carcinoma. The distribution of SP and SK binding sites is different for each gastrointestinal (GI) segment examined. Specific SP binding sites are expressed by arterioles and venules, myenteric plexus, external circular muscle, external longitudinal muscle, muscularis mucosa, epithelial cells of the mucosa, and the germinal centers of lymph nodules. SK binding sites are distributed in a pattern distinct from SP binding sites and are localized to the external circular muscle, external longitudinal muscle, and the muscularis mucosa. Binding sites for NK were not detected in any part of the human GI tract. These results demonstrate that: (1) surgical specimens from the human GI tract can be effectively processed for quantitative receptor autoradiography; (2) of the three mammalian tachykinins tested, SP and SK, but not NK binding sites are expressed in detectable levels in the human GI tract; (3) whereas SK receptor binding sites are expressed almost exclusively by smooth muscle, SP binding sites are expressed by smooth muscle cells, arterioles, venules, epithelial cells of the mucosa and cells associated with lymph nodules; and (4) both SP and SK binding sites expressed by smooth muscle are more stable than SP binding sites expressed by blood vessels, lymph nodules, and mucosal cells

  4. 14C autoradiography with a novel wafer scale CMOS Active Pixel Sensor

    International Nuclear Information System (INIS)

    Esposito, M; Wells, K; Anaxagoras, T; Allinson, N M; Larner, J

    2013-01-01

    14 C autoradiography is a well established technique for structural and metabolic analysis of cells and tissues. The most common detection medium for this application is film emulsion, which offers unbeatable spatial resolution due to its fine granularity but at the same time has some limiting drawbacks such as poor linearity and rapid saturation. In recent years several digital detectors have been developed, following the technological transition from analog to digital-based detection systems in the medical and biological field. Even so such digital systems have been greatly limited by the size of their active area (a few square centimeters), which have made them unsuitable for routine use in many biological applications where sample areas are typically ∼ 10–100 cm 2 . The Multidimensional Integrated Intelligent Imaging (MI3-Plus) consortium has recently developed a new large area CMOS Active Pixel Sensor (12.8 cm × 13.1 cm). This detector, based on the use of two different pixel resolutions, is capable of providing simultaneously low noise and high dynamic range on a wafer scale. In this paper we will demonstrate the suitability of this detector for routine beta autoradiography in a comparative approach with widely used film emulsion.

  5. Demonstration of epidermal growth factor binding sites in the adult rat pancreas by light microscopic autoradiography

    International Nuclear Information System (INIS)

    Chabot, J.G.; Walker, P.; Pelletier, G.

    1987-01-01

    The distribution of epidermal growth factor (EGF) receptors was studied in the pancreas using light microscopic autoradiography, which was performed at different time intervals (2-60 min) after injecting 125 I-labeled EGF intravenously into the adult rat. In the exocrine pancreas, a labeling was found to occur over the pyramidal cells of the acini and cells lining the intercalated ducts. Moreover, substantial binding of EGF to cells of the islets of Langerhans was also revealed. At the 2-min time interval, most silver grains were found at the periphery of the target cells. The localization, as well as the diminution of silver grains over the cytoplasm of these cells, between 7 and 60 min, suggested the internalization and degradation of 125 I-labeled EGF. Control experiments indicated that the autoradiography reaction was due to specific interaction of 125 I-labeled EGF with its receptor. These results clearly indicate that EGF receptors are present in the acinar cells and the cells of intercalated ducts of the exocrine pancreas, as well as the cells of the endocrine pancreas. Finding that there are EGF binding sites in pancreatic acinar cells supports the physiological role of EGF in the regulation of pancreatic exocrine function. The presence of EGF receptors in cells of the islets of Langerhans suggests that EGF may play a role in the regulation of the endocrine pancreas

  6. Application of the autoradiography method for study of the Semipalatinsk test site's lichens

    International Nuclear Information System (INIS)

    Ajdarkhanova, G.S.; Poltavtseva, V.P.

    2003-01-01

    The preliminary results of the Semipalatinsk test site's lichens study with help of the autoradiography method are presented. The lichens selected in 1999 on the experimental sites situated in two areas (20 km southerly from Kurchatov town and on of the Degelen mountain south side) have served as the examined objects. Radiation background of the lichens dwelling areas make up 15-17 and 300 μR/h respectively. For receiving of autoradiograms the FT-41MD film with two-side emulsion layer was used. Exposition time is 48 and 744 hours. From visual analysis of photographic image with this autoradiogram one can draw the conclusion about uniform distribution of the radionuclides. Received results testify about the necessity for continuance of the researches in this direction with expansion lichen species content and geography of their scattering

  7. Efficiency enhancements for MCP-based beta autoradiography imaging

    CERN Document Server

    Lees, J E

    2002-01-01

    We describe three approaches to increase the beta detection efficiency of microchannel plate detectors for biological beta autoradiography:(a)reversing the microchannel plate (MCP) bias polarity, changing the conventional high negative voltage on the input MCP to a grounded input, (b) a reduction in MCP pore size from 12.5 to 6 mu m, (c) using a CsI coating as an efficient secondary electron emitter. We also present our first measurements of double-tracer ( sup 3 H and sup 1 sup 4 C) imaging using pulse height analysis to distinguish between isotopes.

  8. Mastomys (rodentia: muridae) species distinguished by hemoglobin pattern differences.

    Science.gov (United States)

    Robbins, C B; Krebs, J W; Johnson, K M

    1983-05-01

    Hemoglobin electrophoresis patterns were found to be reliable markers for distinguishing two species of Mastomys in Sierra Leone having 32 and 38 chromosomes. All 32-chromosome animals exhibited a single hemoglobin pattern, whereas those with 38-chromosomes had four distinguishable patterns. Both karyotypes were present throughout Sierra Leone. The 38-chromosome species was more prevalent in the Guinea savanna zone to the north, while the 32-chromosome species was most dominant in human-modified high forest areas of the eastern and southern parts of the country. In almost all situations the 32-chromosome species was more common in houses than in bush habitats; the reverse was true for Mastomys having 38 chromosomes. Analysis of hemoglobin patterns thus becomes useful for species identification, and is necessary to understand the roles of the different Mastomys forms as reservoirs of human diseases, such as Lassa fever in West Africa.

  9. Bird species richness and abundance in different forest types at ...

    African Journals Online (AJOL)

    The avifauna of differently disturbed forest types of Kakamega Afrotropical forest were compared from December 2004 to May 2005. A total of 11 220 individual birds comprising of 129 bird species were recorded. Significant differences in abundance of birds among Psidium guajava, Bischoffia javanica, mixed indigenous, ...

  10. total mercury distribution in different fish species representing

    African Journals Online (AJOL)

    DEPT OF AGRICULTURAL ENGINEERING

    ABSTRACT. Concentrations of total mercury (Hg) were measured in the edible muscle tissues of different fish species representing different trophic levels from the Atlantic Coast of Ghana using Cold. Vapour Atomic Absorption Spectrophotometry (CVAAS). Mercury concentrations were gener- ally found to increase with ...

  11. Performance of different strains of Pleurotus species under ...

    African Journals Online (AJOL)

    P. citrinopileatus strain PCB did not produce any fruiting bodies during the period of study. Significant differences (P<0.05) in yield of the different species of mushrooms were recorded. Keywords: Mushrooms, flushes, biological efficiency. J Food Tech in Africa (2002) 7, 98-100. http://dx.doi.org/10.4314/jfta.v7i3.19240.

  12. Evaporation process in histological tissue sections for neutron autoradiography.

    Science.gov (United States)

    Espector, Natalia M; Portu, Agustina; Santa Cruz, Gustavo A; Saint Martin, Gisela

    2018-05-01

    The analysis of the distribution and density of nuclear tracks forming an autoradiography in a nuclear track detector (NTD) allows the determination of 10 B atoms concentration and location in tissue samples from Boron Neutron Capture Therapy (BNCT) protocols. This knowledge is of great importance for BNCT dosimetry and treatment planning. Tissue sections studied with this technique are obtained by cryosectioning frozen tissue specimens. After the slicing procedure, the tissue section is put on the NTD and the sample starts drying. The thickness varies from its original value allowing more particles to reach the detector and, as the mass of the sample decreases, the boron concentration in the sample increases. So in order to determine the concentration present in the hydrated tissue, the application of corrective coefficients is required. Evaporation mechanisms as well as various factors that could affect the process of mass variation are outlined in this work. Mass evolution for tissue samples coming from BDIX rats was registered with a semimicro analytical scale and measurements were analyzed with software developed to that end. Ambient conditions were simultaneously recorded, obtaining reproducible evaporation curves. Mathematical models found in the literature were applied for the first time to this type of samples and the best fit of the experimental data was determined. The correlation coefficients and the variability of the parameters were evaluated, pointing to Page's model as the one that best represented the evaporation curves. These studies will contribute to a more precise assessment of boron concentration in tissue samples by the Neutron Autoradiography technique.

  13. Unrecognized coral species diversity masks differences in functional ecology.

    Science.gov (United States)

    Boulay, Jennifer N; Hellberg, Michael E; Cortés, Jorge; Baums, Iliana B

    2014-02-07

    Porites corals are foundation species on Pacific reefs but a confused taxonomy hinders understanding of their ecosystem function and responses to climate change. Here, we show that what has been considered a single species in the eastern tropical Pacific, Porites lobata, includes a morphologically similar yet ecologically distinct species, Porites evermanni. While P. lobata reproduces mainly sexually, P. evermanni dominates in areas where triggerfish prey on bioeroding mussels living within the coral skeleton, thereby generating asexual coral fragments. These fragments proliferate in marginal habitat not colonized by P. lobata. The two Porites species also show a differential bleaching response despite hosting the same dominant symbiont subclade. Thus, hidden diversity within these reef-builders has until now obscured differences in trophic interactions, reproductive dynamics and bleaching susceptibility, indicative of differential responses when confronted with future climate change.

  14. Morphological and cytological differences within the species Lupinus luteus L.

    Directory of Open Access Journals (Sweden)

    T. Kazimierski

    2015-01-01

    Full Text Available The Lupinus luteus L. from five different geographical proveniences were investigated morphologically and cytologically. The plants originating from Palestine differ from the rest in many morphological traits. Cytologically they differ by one chromosomal translocation. The Palestinian plants give semisterile F1 hybrids with the rest of the species. They are described as a new subspecies: Lupinus luteus L. ssp. orientalis Kazim. et. Kazim.

  15. Different responses to reward comparisons by three primate species.

    Directory of Open Access Journals (Sweden)

    Hani D Freeman

    Full Text Available Recently, much attention has been paid to the role of cooperative breeding in the evolution of behavior. In many measures, cooperative breeders are more prosocial than non-cooperatively breeding species, including being more likely to actively share food. This is hypothesized to be due to selective pressures specific to the interdependency characteristic of cooperatively breeding species. Given the high costs of finding a new mate, it has been proposed that cooperative breeders, unlike primates that cooperate in other contexts, should not respond negatively to unequal outcomes between themselves and their partner. However, in this context such pressures may extend beyond cooperative breeders to other species with pair-bonding and bi-parental care.Here we test the response of two New World primate species with different parental strategies to unequal outcomes in both individual and social contrast conditions. One species tested was a cooperative breeder (Callithrix spp. and the second practiced bi-parental care (Aotus spp.. Additionally, to verify our procedure, we tested a third confamilial species that shows no such interdependence but does respond to individual (but not social contrast (Saimiri spp.. We tested all three genera using an established inequity paradigm in which individuals in a pair took turns to gain rewards that sometimes differed from those of their partners.None of the three species tested responded negatively to inequitable outcomes in this experimental context. Importantly, the Saimiri spp responded to individual contrast, as in earlier studies, validating our procedure. When these data are considered in relation to previous studies investigating responses to inequity in primates, they indicate that one aspect of cooperative breeding, pair-bonding or bi-parental care, may influence the evolution of these behaviors. These results emphasize the need to study a variety of species to gain insight in to how decision-making may

  16. Bovine-associated CNS species resist phagocytosis differently

    Science.gov (United States)

    2013-01-01

    Background Coagulase-negative staphylococci (CNS) cause usually subclinical or mild clinical bovine mastitis, which often remains persistent. Symptoms are usually mild, mostly only comprising slight changes in the appearance of milk and possibly slight swelling. However, clinical mastitis with severe signs has also been reported. The reasons for the differences in clinical expression are largely unknown. Macrophages play an important role in the innate immunity of the udder. This study examined phagocytosis and killing by mouse macrophage cells of three CNS species: Staphylococcus chromogenes (15 isolates), Staphylococcus agnetis (6 isolates) and Staphylococcus simulans (15 isolates). Staphylococcus aureus (7 isolates) was also included as a control. Results All the studied CNS species were phagocytosed by macrophages, but S. simulans resisted phagocytosis more effectively than the other CNS species. Only S. chromogenes was substantially killed by macrophages. Significant variations between isolates were seen in both phagocytosis and killing by macrophages and were more common in the killing assays. Significant differences between single CNS species and S. aureus were observed in both assays. Conclusion This study demonstrated that differences in the phagocytosis and killing of mastitis-causing staphylococci by macrophages exist at both the species and isolate level. PMID:24207012

  17. Quantitative autoradiography of hippocampal GABAB and GASAA receptor changes in Alzheimer's disease

    International Nuclear Information System (INIS)

    Chu, D.C.M.; Penney, J.B. Jr.; Young, A.B.

    1987-01-01

    GABA B and GABA A receptors were examined by quantitative [ 3 H] GABA autoradiography in postmortem human hippocampus from 6 histopathologically verified cases of dementia of the Alzheimer type (DAT) and 6 normal controls. Significant decrements in the B max for both types of GABA receptors were observed in DAT hippocampus as compared to normal controls. No significant differences in K d values were revealed. As compared to controls, DAT hippocampus exhibited fewer GABA B receptors in stratum moleculare of the denate gyrus, stratum lacunosum-molecular and stratum pyramidale of CA 1 . Significant loss of GABA A receptors in DAT hippocampus was also observed in the CA 1 pyramidal cell region. These changes could not be correlated with differences in age nor in postmortem delay between the two groups. These findings may reflect the neuronal pathologies in CA 1 region in dentate gyrus, and in projections from the entorhinal cortex which are associated with the memory impairment of DAT. 29 refs. (Author)

  18. Statistical parametric maps of 18F-FDG PET and 3-D autoradiography in the rat brain: a cross-validation study

    International Nuclear Information System (INIS)

    Prieto, Elena; Marti-Climent, Josep M.; Collantes, Maria; Molinet, Francisco; Delgado, Mercedes; Garcia-Garcia, Luis; Pozo, Miguel A.; Juri, Carlos; Fernandez-Valle, Maria E.; Gago, Belen; Obeso, Jose A.; Penuelas, Ivan

    2011-01-01

    Although specific positron emission tomography (PET) scanners have been developed for small animals, spatial resolution remains one of the most critical technical limitations, particularly in the evaluation of the rodent brain. The purpose of the present study was to examine the reliability of voxel-based statistical analysis (Statistical Parametric Mapping, SPM) applied to 18 F-fluorodeoxyglucose (FDG) PET images of the rat brain, acquired on a small animal PET not specifically designed for rodents. The gold standard for the validation of the PET results was the autoradiography of the same animals acquired under the same physiological conditions, reconstructed as a 3-D volume and analysed using SPM. Eleven rats were studied under two different conditions: conscious or under inhalatory anaesthesia during 18 F-FDG uptake. All animals were studied in vivo under both conditions in a dedicated small animal Philips MOSAIC PET scanner and magnetic resonance images were obtained for subsequent spatial processing. Then, rats were randomly assigned to a conscious or anaesthetized group for postmortem autoradiography, and slices from each animal were aligned and stacked to create a 3-D autoradiographic volume. Finally, differences in 18 F-FDG uptake between conscious and anaesthetized states were assessed from PET and autoradiography data by SPM analysis and results were compared. SPM results of PET and 3-D autoradiography are in good agreement and led to the detection of consistent cortical differences between the conscious and anaesthetized groups, particularly in the bilateral somatosensory cortices. However, SPM analysis of 3-D autoradiography also highlighted differences in the thalamus that were not detected with PET. This study demonstrates that any difference detected with SPM analysis of MOSAIC PET images of rat brain is detected also by the gold standard autoradiographic technique, confirming that this methodology provides reliable results, although partial volume

  19. Statistical parametric maps of {sup 18}F-FDG PET and 3-D autoradiography in the rat brain: a cross-validation study

    Energy Technology Data Exchange (ETDEWEB)

    Prieto, Elena; Marti-Climent, Josep M. [Clinica Universidad de Navarra, Nuclear Medicine Department, Pamplona (Spain); Collantes, Maria; Molinet, Francisco [Center for Applied Medical Research (CIMA) and Clinica Universidad de Navarra, Small Animal Imaging Research Unit, Pamplona (Spain); Delgado, Mercedes; Garcia-Garcia, Luis; Pozo, Miguel A. [Universidad Complutense de Madrid, Brain Mapping Unit, Madrid (Spain); Juri, Carlos [Center for Applied Medical Research (CIMA), Movement Disorders Group, Neurosciences Division, Pamplona (Spain); Clinica Universidad de Navarra, Department of Neurology and Neurosurgery, Pamplona (Spain); Centro de Investigacion Biomedica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Pamplona (Spain); Pontificia Universidad Catolica de Chile, Department of Neurology, Santiago (Chile); Fernandez-Valle, Maria E. [Universidad Complutense de Madrid, MRI Research Center, Madrid (Spain); Gago, Belen [Center for Applied Medical Research (CIMA), Movement Disorders Group, Neurosciences Division, Pamplona (Spain); Centro de Investigacion Biomedica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Pamplona (Spain); Obeso, Jose A. [Center for Applied Medical Research (CIMA), Movement Disorders Group, Neurosciences Division, Pamplona (Spain); Clinica Universidad de Navarra, Department of Neurology and Neurosurgery, Pamplona (Spain); Centro de Investigacion Biomedica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Pamplona (Spain); Penuelas, Ivan [Clinica Universidad de Navarra, Nuclear Medicine Department, Pamplona (Spain); Center for Applied Medical Research (CIMA) and Clinica Universidad de Navarra, Small Animal Imaging Research Unit, Pamplona (Spain)

    2011-12-15

    Although specific positron emission tomography (PET) scanners have been developed for small animals, spatial resolution remains one of the most critical technical limitations, particularly in the evaluation of the rodent brain. The purpose of the present study was to examine the reliability of voxel-based statistical analysis (Statistical Parametric Mapping, SPM) applied to {sup 18}F-fluorodeoxyglucose (FDG) PET images of the rat brain, acquired on a small animal PET not specifically designed for rodents. The gold standard for the validation of the PET results was the autoradiography of the same animals acquired under the same physiological conditions, reconstructed as a 3-D volume and analysed using SPM. Eleven rats were studied under two different conditions: conscious or under inhalatory anaesthesia during {sup 18}F-FDG uptake. All animals were studied in vivo under both conditions in a dedicated small animal Philips MOSAIC PET scanner and magnetic resonance images were obtained for subsequent spatial processing. Then, rats were randomly assigned to a conscious or anaesthetized group for postmortem autoradiography, and slices from each animal were aligned and stacked to create a 3-D autoradiographic volume. Finally, differences in {sup 18}F-FDG uptake between conscious and anaesthetized states were assessed from PET and autoradiography data by SPM analysis and results were compared. SPM results of PET and 3-D autoradiography are in good agreement and led to the detection of consistent cortical differences between the conscious and anaesthetized groups, particularly in the bilateral somatosensory cortices. However, SPM analysis of 3-D autoradiography also highlighted differences in the thalamus that were not detected with PET. This study demonstrates that any difference detected with SPM analysis of MOSAIC PET images of rat brain is detected also by the gold standard autoradiographic technique, confirming that this methodology provides reliable results, although

  20. The Determination of Different Germination Applications on Some Sage Species

    Directory of Open Access Journals (Sweden)

    İmge İhsane Özcan

    2014-05-01

    Full Text Available Sage, which belongs to Labiatae family and contains essential oils, is a typical Mediterranean plant. Being an important and one of the biggest species of this family, sage is said to be named being inspired by the word "Salveo" which means “saver” or “healer” in Latin. Salvia genus is represented by about 900 species on earth. There are 97 natural species of this genus in Turkey’s flora. There is dormancy in seeds of Salvia genus and having mucilage-like seed-coats is an inhibiting factor for germination. Seed germination studies of these species are of great importance in determining production strategies. This research is carried out at 25/15°C, 12 hours in light and 12 hours in dark environment to determine the effects of various germination applications (ethylene, gibberellin, PEG 8000, salicylic acid and seaweed and pre-treatments (pre-drying, pre-cooling and untreated in four species (S. fruticosa, S. officinalis, S. pomifera, S. tomentosa. These trials were conducted at the Department of Field Crops Laboratory of Adnan Menderes University according to completely randomized design with three factors with three replications. Important differences were observed about the germination rate and germination power among the species.

  1. Karyotypic differences and evolutionary tendencies of some species ...

    Indian Academy of Sciences (India)

    Karyotypic differences and evolutionary tendencies of some species from the subgenus Obliquodesmus Mlad. of genus Scenedesmus Meyen. (Chlorophyta, Chlorococcales). BALIK DZHAMBAZOV1,3 ∗, RUMEN MLADENOV2, IVANKA TENEVA2 and DETELINA BELKINOVA2. 1Cell Biology Laboratory, Department of ...

  2. Metabolic responses of Eucalyptus species to different temperature regimes

    NARCIS (Netherlands)

    Mokochinski, Joao Benhur; Mazzafera, Paulo; Sawaya, Alexandra Christine Helena Frankland; Mumm, Roland; Vos, de Ric Cornelis Hendricus; Hall, Robert David

    2018-01-01

    Species and hybrids of Eucalyptus are the world's most widely planted hardwood trees. They are cultivated across a wide range of latitudes and therefore environmental conditions. In this context, comprehensive metabolomics approaches have been used to assess how different temperature regimes may

  3. Evaluation of different combinations of Trichoderma species for ...

    African Journals Online (AJOL)

    The Fusarium disease, caused by Fusarium oxysporum has been observed in different areas of Iran in recent years. Current biocontrol studies have confirmed the effectiveness of the Trichoderma species against many fungal phytopathogens. In this study, biocontrol effects of Trichoderma isolates alone and in combination ...

  4. Coexistence of three different Drosophila species by rescheduling ...

    Indian Academy of Sciences (India)

    We present evidence for coexistence of three different Drosophila species by rescheduling their life history traits in a natural population using the same resource, at the ... Genetics Laboratory, Department of Zoology, Banaras Hindu University, Varanasi 221 005, India; Department of Zoology, Institute of Basic Sciences, ...

  5. Genetic diversity in Jatropha species from different regions of Brazil ...

    African Journals Online (AJOL)

    Genetic diversity in Jatropha species from different regions of Brazil based on morphological characters and inters-simple sequence repeat (ISSR) molecular markers. ... There was no relation between similarity patterns and geographical origin of accesses in the group analysis. Average percentage of polymorphism found ...

  6. Karyotypic differences and evolutionary tendencies of some species ...

    Indian Academy of Sciences (India)

    Karyotypic differences and evolutionary tendencies of some species from the subgenus Obliquodesmus Mlad. of genus Scenedesmus Meyen (Chlorophyta, ... Department of Experimental Medical Science, BMC I 11, Lund University, 22184 Lund, Sweden; Department of Botany, University of Plovdiv, 24 Tsar Assen St., 4000 ...

  7. Species selection in secondary wood products: perspectives from different consumers

    Science.gov (United States)

    Scott A. Bowe; Matthew S. Bumgardner; Matthew S. Bumgardner

    2004-01-01

    This study investigated adult consumer perceptions of several wood species to determine if word-based and appearance-based evaluations differed. The research replicated a 2001 study by the authors, which used undergraduate college students as a proxy for older and more experienced adult furniture consumers. The literature is somewhat inconclusive concerning the extent...

  8. fish species and size distribution and abundance in different areas

    African Journals Online (AJOL)

    ABSTRACT. The study was carried out to investigate fish species distribution and abundance in different areas and size structure variations according to depth in Lake Victoria, Tanzania. Data were collected using a bottom trawl net during rainy and dry seasons in 2002. The results show that there were significant ...

  9. Spatial patterns of encroaching shrub species under different ...

    African Journals Online (AJOL)

    ... in Middelburg (Eastern Cape, South Africa) coexist and partition space under different grazing regimes (viz. continuous rest, and continuous, summer and winter grazing). We used point-pattern analysis to assess the spatial ecology of these species. We also used an index of integration (mingling index), where low values ...

  10. Protein quality of three different species of earthrvorms

    African Journals Online (AJOL)

    No difference in protein quality was noted between three species. of earthworms, as evaluated by net protein ... animal production industry is still limited since conventional production and harvesting methods presently being used will not suffice to produce sufficient .... Samples were defatted by ether extraction and protein ...

  11. Dry Preservation of Spermatozoa: Considerations for Different Species.

    Science.gov (United States)

    Patrick, Jennifer; Comizzoli, Pierre; Elliott, Gloria

    2017-04-01

    The current gold standard for sperm preservation is storage at cryogenic temperatures. Dry preservation is an attractive alternative, eliminating the need for ultralow temperatures, reducing storage maintenance costs, and providing logistical flexibility for shipping. Many seeds and anhydrobiotic organisms are able to survive extended periods in a dry state through the accumulation of intracellular sugars and other osmolytes and are capable of returning to normal physiology postrehydration. Using techniques inspired by nature's adaptations, attempts have been made to dehydrate and dry preserve spermatozoa from a variety of species. Most of the anhydrous preservation research performed to date has focused on mouse spermatozoa, with only a small number of studies in nonrodent mammalian species. There is a significant difference between sperm function in rodent and nonrodent mammalian species with respect to centrosomal inheritance. Studies focused on reproductive technologies have demonstrated that in nonrodent species, the centrosome must be preserved to maintain sperm function as the spermatozoon centrosome contributes the dominant nucleating seed, consisting of the proximal centriole surrounded by pericentriolar components, onto which the oocyte's centrosomal material is assembled. Preservation techniques used for mouse sperm may therefore not necessarily be applicable to nonrodent spermatozoa. The range of technologies used to dehydrate sperm and the effect of processing and storage conditions on fertilization and embryogenesis using dried sperm are reviewed in the context of reproductive physiology and cellular morphology in different species.

  12. Species differences in seedling growth and leaf water response to ...

    African Journals Online (AJOL)

    The effect of different levels of R:FR was studied on seedlings of four Ghanaian timber species of different ecological guilds to assess their growth and leaf water response to changes in R:FR. The experiment was conducted in shade houses of varying light qualities (0.30, 0.46 and 0.76 R:FR) achieved with the use of ...

  13. Digital autoradiography using room temperature CCD and CMOS imaging technology

    International Nuclear Information System (INIS)

    Cabello, Jorge; Bailey, Alexis; Kitchen, Ian; Prydderch, Mark; Clark, Andy; Turchetta, Renato; Wells, Kevin

    2007-01-01

    CCD (charged coupled device) and CMOS imaging technologies can be applied to thin tissue autoradiography as potential imaging alternatives to using conventional film. In this work, we compare two particular devices: a CCD operating in slow scan mode and a CMOS-based active pixel sensor, operating at near video rates. Both imaging sensors have been operated at room temperature using direct irradiation with images produced from calibrated microscales and radiolabelled tissue samples. We also compare these digital image sensor technologies with the use of conventional film. We show comparative results obtained with 14 C calibrated microscales and 35 S radiolabelled tissue sections. We also present the first results of 3 H images produced under direct irradiation of a CCD sensor operating at room temperature. Compared to film, silicon-based imaging technologies exhibit enhanced sensitivity, dynamic range and linearity

  14. Boron autoradiography method applied to the study of steels

    International Nuclear Information System (INIS)

    Gugelmeier, R.; Barcelo, G.N.; Boado, J.H.; Fernandez, C.

    1986-01-01

    The boron state, contained in the steel microestructure, is determined. The autoradiography by neutrons is used, permiting to obtain boron distribution images by means of additional information which is difficult to acquire by other methods. The application of the method is described, based on the neutronic irradiation of a polished steel sample, over which a celulose nitrate sheet or other appropriate material is fixed to constitute the detector. The particles generated by the neutron-boron interaction affect the detector sheet, which is subsequently revealed with a chemical treatment and can be observed at the optical microscope. In the case of materials used for the construction of nuclear reactors, special attention must be given to the presence of boron, since owing to the exceptionaly high capacity of neutron absorption, lowest quantities of boron acquire importance. The adaption of the method to metallurgical problems allows the obtainment of a correlation between the boron distribution images and the material's microstructure. (M.E.L.) [es

  15. Localization of IAA transporting tissue by tissue printing and autoradiography

    International Nuclear Information System (INIS)

    Mee-Rye Cha; Evans, M.L.; Hangarter, R.P.

    1991-01-01

    Tissue printing on nitrocellulose membranes provides a useful technique for visualizing anatomical details of tissue morphology of cut ends of stem segments. Basal ends of Coleus stem and corn coleoptile segments that were transporting 14 C-IAA were gently blotted onto DEAE-nitrocellulose for several minutes to allow 14 C-IAA to efflux from the tissue. Because of the anion exchange properties of DEAE-nitrocellulose the 14 C-IAA remains on the membrane at the point it leaves the transporting tissue. Autoradiography of the DEAE membrane allowed indirect visualization of the tissues preferentially involved in auxin transport. The authors observed that polar transport through the stem segments occurred primarily through or in association with vascular tissues. However, in Coleus stems, substantial amounts of the label appeared to move through the tissue by diffusion as well as by active transport

  16. Mucopolysaccharides in the trabecular meshwork. Light and electron microscopic autoradiography

    Energy Technology Data Exchange (ETDEWEB)

    Ohnishi, Yoshitaka; Yamana, Yasuo; Abe, Masahiro (Kyushu Univ., Fukuoka (Japan). Faculty of Medicine)

    1982-09-01

    The localization of /sup 35/S-sulfate and /sup 3/H-glucosamine in the trabecular region of the hamster was studied by light and electron microscopic autoradiography after the intraperitoneal injection. Exposed silver grains of /sup 35/S-sulfate were concentrated in the trabecular meshwork, sclera and cornea, and grains of /sup 35/H-glucosamine were localized in the trabecular region. The radioactivity of both isotopes was observed in the Golgi apparatuses of the endothelial cells and fibroblasts in Schlemm's canal and the trabecular meshwork. Thereafter, the grains were noted over the entire cytoplasm, except for the nucleus, and then were incorporated into the amorphous substance and collagen fibers in the juxtacanalicular connective tissue. These results suggest that endothelial cells in the trabecular region synthesize and secrete the sulfated mucopolysaccharides and hyaluronic acid.

  17. Choline Autoradiography of Human Prostate Cancer Xenograft: Effect of Castration

    Directory of Open Access Journals (Sweden)

    Hossein Jadvar

    2008-05-01

    Full Text Available The purpose of this study was to investigate the effects of castration and tracer uptake time interval on the level of radiolabeled choline accumulation in murine-implanted human prostate tumor xenografts using quantitative autoradiography. We implanted androgen-dependent (CWR22 and androgen-independent (PC3 human prostate cancer cells in castrated (n = 9 and noncastrated (n = 9 athymic male mice and allowed tumors to grow to 1 cm3. The mice were euthanized at 5, 10, and 20 minutes after injection of 5 µCi [14C]-choline. Mice were prepared for quantitative autoradiography with density light units of viable tumor sections converted to units of radioactivity (nCi/mm2 using calibration. Two-group comparisons were performed using a two-tailed Student t-test with unequal variance and with a significance probability level of less than .05. Two-group comparisons between the means of the tracer uptake level for each tumor type at each of three time points for each of two host types showed that (1 the level of tracer localization in the two tumor types was affected little in relation to the host type and (2 PC3 tumor uptake level tended to increase slowly with time only in the noncastrated host, whereas this was not observed in the castrated host or with CWR22 tumor in either host type. The uptake time interval and castration do not appear to significantly affect the level of radiolabeled choline uptake by the human prostate cancer xenograft.

  18. Evaluation of different mushroom species as indicator organisms[Radioecology

    Energy Technology Data Exchange (ETDEWEB)

    Gjelsvik, R.; Stensrud, H. [Norwegian Radiation Protection Authority, Oesteraes (Norway)

    2006-04-15

    To investigate the differences between accumulation capacity and transfer factor from soil to different mushroom species, 25 species were collected at 9 locations in south and central parts of Norway. Yearly sampling has been carried since 1988 and a total of 1283 samples analysed for {sup 137}Cs. Entire, fresh fruit bodies were collected, homogenized and measured fresh weight. Levels of ground deposition of {sup 137}Cs in Norway were taken from a nationwide sampling program carried out by National Institute of Radiation Hygiene in 1986 following the Chernobyl accident. The estimated ground deposition of {sup 137}Cs (Bq m{sup -2}) and the corresponding activity concentrations of {sup 137}Cs in mushrooms were used to calculate the ratio between activity concentration in mushroom and ground deposition (transfer factor, TF). Both the mushroom and the soil data are decay corrected to 2004. Considerable differences in accumulation of {sup 137}Cs in different mushroom species were found. The Tricholoma album, Cortinarius armillatus, and Rozites caperata were found to have the highest levels. Followed by two Cortinarius species, C. brunneus and C. traganus. The highest transfer factors were found in the Cortinarius armillatus and C. brunneus, but also Tricoloma album and Rozites caperata had high transfer factors. Other mushroom species, e.g. Leccinum versipelle (Orange Birch Bolete), Amanita muscaria (Fly Agaric), Boletus subtomentosus (Suede Bolete), Collybia butyracea (Butter Cap) generally show a low radiocaesium uptake and are therefore not considered as good indicators. Even though Tricholoma album, Cortinarius armillatus, C. brunneus, C. traganus, and Rozites caperata accumulate high levels of {sup 137}Cs, their seasonality and local occurrence should be evaluated before they are considered as good indicator organisms. (LN)

  19. Decoding the similarities and differences among mycobacterial species.

    Directory of Open Access Journals (Sweden)

    Sony Malhotra

    2017-08-01

    Full Text Available Mycobacteriaceae comprises pathogenic species such as Mycobacterium tuberculosis, M. leprae and M. abscessus, as well as non-pathogenic species, for example, M. smegmatis and M. thermoresistibile. Genome comparison and annotation studies provide insights into genome evolutionary relatedness, identify unique and pathogenicity-related genes in each species, and explore new targets that could be used for developing new diagnostics and therapeutics. Here, we present a comparative analysis of ten-mycobacterial genomes with the objective of identifying similarities and differences between pathogenic and non-pathogenic species. We identified 1080 core orthologous clusters that were enriched in proteins involved in amino acid and purine/pyrimidine biosynthetic pathways, DNA-related processes (replication, transcription, recombination and repair, RNA-methylation and modification, and cell-wall polysaccharide biosynthetic pathways. For their pathogenicity and survival in the host cell, pathogenic species have gained specific sets of genes involved in repair and protection of their genomic DNA. M. leprae is of special interest owing to its smallest genome (1600 genes and ~1300 psuedogenes, yet poor genome annotation. More than 75% of the pseudogenes were found to have a functional ortholog in the other mycobacterial genomes and belong to protein families such as transferases, oxidoreductases and hydrolases.

  20. Introduction of some Entomobryidae species (Collembola from different Caspian regions

    Directory of Open Access Journals (Sweden)

    Elliyeh Yahyapoor

    2013-09-01

    Full Text Available The family Entomobryidae is a group of Collembola which is also called "slender springtails". They are considered as a group of springtails characterized as having an enlarged fourth abdominal segment and a well-developed furcula. Fourth segmented antenna always is present. The species in this family may be heavily scaled and can be very colorful. They can be found throughout the world in a wide range of habitats but most species live in leaf litter, on the soil surface, under the bark of trees, in the forest canopy or in caves. In order to investigate the fauna of the Entomobryidae, different soil samples were taken from leaf litter in Caspian regions located in Mazandaran province (orchards, agricultural crops and forests. The Collembola specimens were extracted by heat in Berlise funnel during 1388-1390. Furthermore, some specimens were caught by pitfall traps. In general, five genera and five species were collected among which three species (indicated by * were new for Iran. The specimens belonging to the genus Lepidocyrtus (Bourlet, 1839 were not matched with available taxonomic keys. The identified species were as follows: Entomobrya atrocincta *, E. multifasciata*, Seria domestica*, Heteromurus major, Pseudosinella octopunctata.

  1. The Role of Different Agricultural Plant Species in Air Pollution

    Science.gov (United States)

    Fiala, P.; Miller, D.; Shivers, S.; Pusede, S.; Roberts, D. A.

    2017-12-01

    The goal of this research project is to use remote sensing data to study the relationship between different plant species and the pollutants in the air. It is known that chemical reactions within plants serve as both sources and sinks for different types of Volatile Organic Compounds. However, the species-specific relationships have not been well studied. Through the better characterization of this relationship, certain aspects of air pollution may be more effectively managed. For this project, I used Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data and trace gas measurements from instruments on board the NASA DC-8 to assess the relationship between different plant species and the pollutants in the air. I used measurements primarily from the agricultural land surrounding Bakersfield, CA. I created a map of the crop species in this area using Multiple Endmember Spectral Mixture Analysis (MESMA) on the AVIRIS imagery, and matched this to trace gas measurements taken on the DC-8. I used a Hysplit matrix trajectory to account for the air transport over the vegetation and up to contact with the plane. Finally, I identified correlations between the plant types and the concentration of the pollutants. The results showed that there were significant relationships between specific species and pollutants, with lemons and grapes contributing to enhanced pollution, and tree nuts reducing pollution. Specifically, almonds produced significantly lower levels of O3 , NO, and NO2. Lemons and grapes had high O3 levels, and lemons had high levels of isoprene. In total, these data show that it may be possible to mitigate airborne pollution via selective planting; however, the overall environmental effects are much more complicated and must be analyzed further.

  2. Comparing optical properties of different species of diatoms

    DEFF Research Database (Denmark)

    Maibohm, Christian; Friis, Søren Michael Mørk; Su, Y.

    2015-01-01

    Diatoms are single cellular algae encapsulate d in an external wall of micro-structured porous silica called the frustule. Diatoms are present in all water environments and contribute with 20-25 % of the global primary production of oxygen by photosynthesis. The appearance of the frustule is very...... species dependent with huge variety in size, shape, and micro- structure. We have experimentally investigated optical properties of frustules of several species of diatoms to further understand light harvesting properties together with commo n traits, effects and differences between the different...... frustules. We have observed, when incident light interacts w ith the micro-structured frustule it is multiple diffracted giving rise to wavelength dependent multiple focal points and other optical effects. Experimental results have been simulated and well confirmed by free space FFT propagation routine...

  3. Autoradiography of [14C]paraquat or [14C]diquat in frogs and mice: accumulation in neuromelanin

    International Nuclear Information System (INIS)

    Lindquist, N.G.; Larsson, B.S.; Lyden-Sokolowski, A.

    1988-01-01

    The herbicide paraquat has been suggested as a causative agent for Parkinson's disease because of its structural similarity to a metabolite of 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP), which may induce a parkinsonism-like condition. MPTP as well as its metabolite 1-methyl-4-phenylpyridine have melanin affinity, and the parkinsonism-inducing potency of MPTP is much stronger in species with melanin in the nerve cells. Autoradiography of [ 3 H]MPTP in experimental animals has shown accumulation in melanin-containing tissues, including pigmented neurons. In the present whole body autoradiographic study accumulation and retention was seen in neuromelanin in frogs after i.p. injection of [ 14 C]paraquat or[ 14 C]diquat. By means of whole body autoradiography of [ 14 C]diquat in mice (a species with no or very limited amounts of neuromelanin) a low, relatively uniformly distributed level of radioactivity was observed in brain tissue. Accumulation of toxic chemical compounds, such as paraquat, in neuromelanin may ultimately cause lesions in the pigmented nerve cells, leading to Parkinson's disease

  4. The richness and diversity of Lepidoptera species in different ...

    African Journals Online (AJOL)

    The family Nymphalidae was the most dominant one in the parc with 32.48%. The diversity index (H' and H'max) and the equitability (E) calculated for the 6 types of habitats is H'= 2,74 bits, H'max = 4,09 bits and E = 0,67 bits, meaning that the Lepidoptera species are at equilibrium with the different types of habitat which ...

  5. Uptake and processing of [3H]retinoids in rat liver studied by electron microscopic autoradiography

    International Nuclear Information System (INIS)

    Hendriks, H.F.; Elhanany, E.; Brouwer, A.; de Leeuw, A.M.; Knook, D.L.

    1988-01-01

    The role of rat liver cell organelles in retinoid uptake and processing was studied by electron microscopic autoradiography. [ 3 H]Retinoids were administered either orally, to make an inventory of the cell organelles involved, or intravenously as chylomicron remnant constituents to study retinoid processing by the liver with time. No qualitative differences were observed between the two routes of administration. Time-related changes in the distribution of grains were studied using chylomicron remnant [ 3 H]retinoids. The percentages of grains observed over cells and the space of Disse at 5 and 30 min after administration were, respectively: parenchymal cells, 72.6 and 70.4%; fat-storing cells, 5.0 and 18.1%, and the space of Disse, 14.4 and 8.9%. Low numbers of grains were observed over endothelial and Kupffer cells. The percentages of grains observed over parenchymal cell organelles were, respectively: sinusoidal area, 59.6 and 34.4%; smooth endoplasmic reticulum associated with glycogen, 13.8 and 13.4%; mitochondria, 5.4 and 13.6%; rough endoplasmic reticulum, 4.2 and 7.3%, and rough endoplasmic reticulum associated with mitochondria, 3.7 and 6.5%. It is concluded that chylomicron remnant [ 3 H]retinoids in combination with electron microscopic autoradiography provide a good system to study the liver processing of retinoids in vivo. These results, obtained in the intact liver under physiological conditions, further substantiate that retinoids are processed through parenchymal cells before storage occurs in fat-storing cell lipid droplets, that retinoid uptake is not mediated through lysosomes and that the endoplasmic reticulum is a major organelle in retinoid processing

  6. Beta Autoradiography. An analytical technique to investigate radionuclides contamination on surface

    International Nuclear Information System (INIS)

    Ficher, P.; Goutelard, F.; Siitari-Kauppi, M.

    2012-01-01

    In decommissioning of old buildings and after disposal of nuclear facilities (materials, glove boxes,...), the inventory of the radioactive contamination of various building materials needs to be obtained in order to fix the working condition for dismantling. The challenge of this study was to classify different building materials of a whole research laboratory that was dedicated to research on organic molecules labeled with H-3 and C-14. The problem of waste classification is essential for safety treatment of waste and also for its cost. The analytical technique of beta autoradiography particularly well known for biological researches has been tested to investigate radionuclides contamination on surface. This technique is mainly interesting for beta and alpha emitters but also sensitive to gamma radiation. The first step of this technique is the deposit of a film on the surface of material to be analyzed. Films can be deposited on the ground or also fixed on the walls or even on the ceiling. The film is a plastic sheet covered with an emulsion containing photostimulable crystals and Eu that is activated when the film is exposed on radioactive source. The exposed films are then scanned with the Cyclone Plus equipment to get a digitized image. This image represents the radioactivity of the surface studied. The possibility to re-use the films is very important to investigate a large area. This autoradiography technique has retained our attention for its sensitivity and moreover the possibility of 2-dimensional investigation has been found as a real advantage. However it remains now as a qualitative technique and new studies must be launched to prove its quantitative potentialities. The high spatial resolution was not as important as in biological observation, and the mm resolution is totally sufficient

  7. Therapeutic Applications of Rose Hips from Different Rosa Species

    Directory of Open Access Journals (Sweden)

    Inés Mármol

    2017-05-01

    Full Text Available Rosa species, rose hips, are widespread wild plants that have been traditionally used as medicinal compounds for the treatment of a wide variety of diseases. The therapeutic potential of these plants is based on its antioxidant effects caused by or associated with its phytochemical composition, which includes ascorbic acid, phenolic compounds and healthy fatty acids among others. Over the last few years, medicinal interest in rose hips has increased as a consequence of recent research that has studied its potential application as a treatment for several diseases including skin disorders, hepatotoxicity, renal disturbances, diarrhoea, inflammatory disorders, arthritis, diabetes, hyperlipidaemia, obesity and cancer. In this review, the role of different species of Rosa in the prevention of treatment of various disorders related to oxidative stress, is examined, focusing on new therapeutic approaches from a molecular point of view.

  8. Therapeutic Applications of Rose Hips from Different Rosa Species.

    Science.gov (United States)

    Mármol, Inés; Sánchez-de-Diego, Cristina; Jiménez-Moreno, Nerea; Ancín-Azpilicueta, Carmen; Rodríguez-Yoldi, María Jesús

    2017-05-25

    Rosa species, rose hips, are widespread wild plants that have been traditionally used as medicinal compounds for the treatment of a wide variety of diseases. The therapeutic potential of these plants is based on its antioxidant effects caused by or associated with its phytochemical composition, which includes ascorbic acid, phenolic compounds and healthy fatty acids among others. Over the last few years, medicinal interest in rose hips has increased as a consequence of recent research that has studied its potential application as a treatment for several diseases including skin disorders, hepatotoxicity, renal disturbances, diarrhoea, inflammatory disorders, arthritis, diabetes, hyperlipidaemia, obesity and cancer. In this review, the role of different species of Rosa in the prevention of treatment of various disorders related to oxidative stress, is examined, focusing on new therapeutic approaches from a molecular point of view.

  9. Expression differences in Aphidius ervi (Hymenoptera: Braconidae females reared on different aphid host species

    Directory of Open Access Journals (Sweden)

    Gabriel I. Ballesteros

    2017-08-01

    Full Text Available The molecular mechanisms that allow generalist parasitoids to exploit many, often very distinct hosts are practically unknown. The wasp Aphidius ervi, a generalist koinobiont parasitoid of aphids, was introduced from Europe into Chile in the late 1970s to control agriculturally important aphid species. A recent study showed significant differences in host preference and host acceptance (infectivity depending on the host A. ervi were reared on. In contrast, no genetic differentiation between A. ervi populations parasitizing different aphid species and aphids of the same species reared on different host plants was found in Chile. Additionally, the same study did not find any fitness effects in A. ervi if offspring were reared on a different host as their mothers. Here, we determined the effect of aphid host species (Sitobion avenae versus Acyrthosiphon pisum reared on two different host plants alfalfa and pea on the transcriptome of adult A. ervi females. We found a large number of differentially expressed genes (between host species: head: 2,765; body: 1,216; within the same aphid host species reared on different host plants: alfalfa versus pea: head 593; body 222. As expected, the transcriptomes from parasitoids reared on the same host species (pea aphid but originating from different host plants (pea versus alfalfa were more similar to each other than the transcriptomes of parasitoids reared on a different aphid host and host plant (head: 648 and 1,524 transcripts; body: 566 and 428 transcripts. We found several differentially expressed odorant binding proteins and olfactory receptor proteins in particular, when we compared parasitoids from different host species. Additionally, we found differentially expressed genes involved in neuronal growth and development as well as signaling pathways. These results point towards a significant rewiring of the transcriptome of A. ervi depending on aphid-plant complex where parasitoids develop, even if

  10. Population and species differences in treeline tree species germination in response to climate change

    Science.gov (United States)

    Kueppers, L. M.; Faist, A.; Castanha, C.

    2009-12-01

    The ability of plant species to recruit within and beyond their current geographic ranges in response to climate warming may be constrained by population differences in response. A number of studies have highlighted the degree to which genotype and environment are strongly linked in forest trees (i.e., provenances), but few studies have examined whether these local adaptations are at all predictive of population or species response to change. We report the results of lab germination experiments using high and low elevation populations of both limber pine (Pinus flexilis) and Engelmann spruce (Picea engelmannii), which are important treeline species in the Rocky Mountains. Seeds collected in 2008 were germinated under two different temperature regimes (ambient and +5°C) and two different moisture regimes, and followed for 17 weeks. For both species and source elevations, warmer temperatures advanced the timing of emergence by up to 20 days, whereas the effects of moisture were less consistent. At harvest, high elevation limber pine had less root and shoot biomass, and a slightly lower root:shoot ratio, under the +5°C treatment, whereas low elevation limber pine seedling mass was not sensitive to temperature. Whether these differences persist under field conditions will be tested in a field experiment now established at Niwot Ridge, CO. The ability to accurately predict tree seedling recruitment and ultimately shifts in treeline position with climate change will improve our ability to model changes in surface albedo, water cycling and carbon cycling, all of which can generate feedbacks to regional and global climate.

  11. Variation in biofouling on different species of Indian timbers

    Digital Repository Service at National Institute of Oceanography (India)

    Raveendran, T.V.; Wagh, A.B.

    Biofouling on twenty species of wood exposed in waters of Mormugao Harbour, Goa, India have been presented. Macrofouling biomass varied from species to species. Maximum biomass was recorded on Artocarpus chaplasha (4 kg/m2) and minimum on Hopea...

  12. Hyperspectral optical imaging of two different species of lepidoptera

    Directory of Open Access Journals (Sweden)

    Vukusic Pete

    2011-01-01

    Full Text Available Abstract In this article, we report a hyperspectral optical imaging application for measurement of the reflectance spectra of photonic structures that produce structural colors with high spatial resolution. The measurement of the spectral reflectance function is exemplified in the butterfly wings of two different species of Lepidoptera: the blue iridescence reflected by the nymphalid Morpho didius and the green iridescence of the papilionid Papilio palinurus. Color coordinates from reflectance spectra were calculated taking into account human spectral sensitivity. For each butterfly wing, the observed color is described by a characteristic color map in the chromaticity diagram and spreads over a limited volume in the color space. The results suggest that variability in the reflectance spectra is correlated with different random arrangements in the spatial distribution of the scales that cover the wing membranes. Hyperspectral optical imaging opens new ways for the non-invasive study and classification of different forms of irregularity in structural colors.

  13. Hyperspectral optical imaging of two different species of lepidoptera

    Science.gov (United States)

    Medina, José Manuel; Nascimento, Sérgio Miguel Cardoso; Vukusic, Pete

    2011-05-01

    In this article, we report a hyperspectral optical imaging application for measurement of the reflectance spectra of photonic structures that produce structural colors with high spatial resolution. The measurement of the spectral reflectance function is exemplified in the butterfly wings of two different species of Lepidoptera: the blue iridescence reflected by the nymphalid Morpho didius and the green iridescence of the papilionid Papilio palinurus. Color coordinates from reflectance spectra were calculated taking into account human spectral sensitivity. For each butterfly wing, the observed color is described by a characteristic color map in the chromaticity diagram and spreads over a limited volume in the color space. The results suggest that variability in the reflectance spectra is correlated with different random arrangements in the spatial distribution of the scales that cover the wing membranes. Hyperspectral optical imaging opens new ways for the non-invasive study and classification of different forms of irregularity in structural colors.

  14. Iodine Emissions from Seaweeds: Species-dependent and Seasonal Differences

    Science.gov (United States)

    Adams, Thomas; Ball, Stephen; Leblanc, Catherine; Potin, Philippe

    2015-04-01

    Emissions of iodine from macroalgae into the marine boundary layer (MBL) significantly impact tropospheric chemistry and the biogeochemical cycling of iodine. Gas-phase iodine chemistry perturbs the usual HOx and NOx radical cycles, provides additional sink reactions for tropospheric ozone, and modifies atmospheric oxidizing capacity. Iodine oxides (IxOywith x ≥ 2) formed through the reaction of iodine atoms with ozone nucleate new aerosol particles which, if they grow sufficiently, can act as cloud condensation nuclei (CCN) and so influence the local climate in coastal regions. Some seaweeds, such as brown algae, are important bio-accumulators of iodine. They specifically induce iodine metabolism to protect themselves against oxidative stress, both as a defence mechanism and when exposed to air around low tide. Indeed the dominant emission source of iodine into the atmosphere in coastal regions comes from intertidal macroalgal beds, particularly those of kelp species. We present results from an extensive laboratory study of molecular iodine (I2) emissions from five seaweed species (two Fucales, Ascophyllum nodosum and Fucus vesiculosus, and three kelp species, Laminaria digitata, L. hyperborea and Saccharina latissima). Eighty-four incubation experiments were performed at the Station Biologique in Roscoff (Brittany, France) between September 2012 and June 2013 to quantify species-dependent I2 emission rates in response to progressive air exposure, mimicking low tide, and to investigate any seasonal differences. Measurements were conducted on 'fresh' biological samples: Ascophyllum and Fucus thalli were collected whilst still submerged on an ebbing tide, transported in seawater to the laboratory and analysed immediately; kelp samples were collected by boat, stored in an outside aquarium in running seawater and analysed within a few days. I2 emissions were quantified at high time resolution by broadband cavity enhanced absorption spectrometry (1σ detection limit

  15. Different stereoselectivity in the reduction of pulegone by Mentha species.

    Science.gov (United States)

    Fuchs, S; Beck, T; Mosandl, A

    2001-04-01

    Aqueous solutions of [2H]-labeled pulegone enantiomers were fed to Mentha spicata ssp. spicata L. and Mentha spicata ssp. crispata L. shoot tip and first leaf pair. After solid phase microextraction the essential oil was analysed with enantioselective multidimensional gas chromatography/mass spectrometry. Both Mentha spicata species were able to convert labelled (1R)- and (1S)-pulegone at the same rate into the corresponding menthone and isomenthone, indicating an unspecific process. The reduction of both pulegone enantiomers preferably led to the cis-stereoisomers. The observed stereoselectivity is completely different from those of pulegone reduction by Mentha x piperita L.

  16. Determination of Biogenic Amines in Different Shrimp Species for Export

    International Nuclear Information System (INIS)

    Myat Myat Thaw; Oo Aung; Aung Myint; Bisswanger, Hans

    2004-06-01

    This study is part of the project on the ''Quality Assurance of Different Shrimp Species for Export''. Local shrimp samples were collected from Ministry of Livestock and Fisheries and various private enterprises. Contents of biogenic amines were determined by using benzoyl chloride derivatization method with HPLC (reverse phase high performance liquid chromatography). Based on the biogenic amines, quality index of shrimps were correlated with freshness index so that the grade of shrimp samples can be classified as excellent, good, and acceptable. All sizes of shrimps such as extra large, large, medium were found to excceptable respectively

  17. Metabolomic Analyses of Leishmania Reveal Multiple Species Differences and Large Differences in Amino Acid Metabolism.

    Directory of Open Access Journals (Sweden)

    Gareth D Westrop

    Full Text Available Comparative genomic analyses of Leishmania species have revealed relatively minor heterogeneity amongst recognised housekeeping genes and yet the species cause distinct infections and pathogenesis in their mammalian hosts. To gain greater information on the biochemical variation between species, and insights into possible metabolic mechanisms underpinning visceral and cutaneous leishmaniasis, we have undertaken in this study a comparative analysis of the metabolomes of promastigotes of L. donovani, L. major and L. mexicana. The analysis revealed 64 metabolites with confirmed identity differing 3-fold or more between the cell extracts of species, with 161 putatively identified metabolites differing similarly. Analysis of the media from cultures revealed an at least 3-fold difference in use or excretion of 43 metabolites of confirmed identity and 87 putatively identified metabolites that differed to a similar extent. Strikingly large differences were detected in their extent of amino acid use and metabolism, especially for tryptophan, aspartate, arginine and proline. Major pathways of tryptophan and arginine catabolism were shown to be to indole-3-lactate and arginic acid, respectively, which were excreted. The data presented provide clear evidence on the value of global metabolomic analyses in detecting species-specific metabolic features, thus application of this technology should be a major contributor to gaining greater understanding of how pathogens are adapted to infecting their hosts.

  18. Autoradiography of neutron activated plant samples using imaging plate

    Energy Technology Data Exchange (ETDEWEB)

    Koyama, Motoko; Maeno, Tomokazu; Tanizaki, Yoshiyuki [Tokyo Metropolitan Industrial Technology Research Institute, Tokyo (Japan)

    1999-12-01

    Autoradiography is a convenient and qualitative method to study two-dimensional distribution of radioisotopes in various materials. Imaging Plate (IP), which is a new radiography apparatus of applying a photostimulable luminescence, has some advantages in comparison with X-ray film, for example, high sensitivity, wide latitude and high fidelity for any radiations. The high sensitivity of IP makes it possible to observe the distribution of short-lived nuclides, such as {sup 28}Al, {sup 56}Mn. The intensity of autoradiograms for neutron irradiated Al- and Mn-standard samples decreased according to {sup 28}Al and {sup 56}Mn half-lives, respectively. It was proportional to the contents of Al- and Mn-standard. More autoradiograms of Al- and Mn-treated cuttings from plants were obtained in high intensitive imaging than those of the water-treated cuttings. This showed that Al and Mn were taken in by the plant bodies from solutions. High intensitive imaging was recognized in the leaf vein and epicotyls. This indicates that Mn tends to accumulate in the vascular system. The imaging of the apices region for all samples showed high intensities. It seems that high elemental concentrations exist in shoot apices. The autoradiographic intensities corresponded to the measurement results by {gamma}-ray spectrometry. (author)

  19. Autoradiography of plant samples exposed to neutron activation

    Energy Technology Data Exchange (ETDEWEB)

    Koyama, Motoko; Maeno, Tomokazu; Tanizaki, Yoshiyuki [Tokyo Metropolitan Industrial Technology Research Inst. (Japan)

    1999-01-01

    Distribution of short half-life nuclides in seedlings of Vigna angularis exposed to neutron activation was investigated by autoradiography using image plate, which is highly sensitive. A seedling 13 cm in height was cut and cultured in Al(NO{sub 3}){sub 3} or Mn(NO{sub 3}){sub 2} for several days. The upper part of the seedling was exposed to neutron radiation in PN3 facility of KURRI and applied onto image plate (Fuji Film Co. Ltd., BAS-5000 MAC) as well as {gamma}-ray spectroscopy for quantitative analysis of short half-life nuclides. Thus obtained PSL intensities were compared among three parts of seedling; terminal bud, epicotyl and first leaf. The incorporated Al and Mn were indicated to accumulate mainly in the first leaf and the terminal bud, whereas their accumulations were less in the epicotyl, which is a conductive tissue. With regards to other short half-life nuclides such as Ca, K, Mg, Cl, etc., Ca level of the first leaf was decreased by the presence of Mn or Al, whereas Mn level of terminal bud was decreased in the presence of Mn. These results indicate that it became possible by the use of image plate to analyze short half-life nuclides in samples exposed to neutron activation. (M.N.)

  20. Neutron induced autoradiography of some minerals from the Allchar mine

    CERN Document Server

    Lazaru, A; Skvarc, J; Kristof, E S; Stafilov, T

    1999-01-01

    The mineral lorandite from the Allchar mine (Kavadarci, Macedonia) will be used to estimate the average solar neutrino flux. Here, the amount of sup 2 sup 0 sup 5 Pb isotope induced by the sup 2 sup 0 sup 5 Tl(nu sub e , e sup -) sup 2 sup 0 sup 5 Pb reaction is measured and converted to neutrino flux. To determine the few sup 2 sup 0 sup 5 Pb atoms that are produced by solar neutrinos in the Tl ore it is necessary to know all the interfering reactions and/or impurities producing sup 2 sup 0 sup 5 Pb. The concentration and/or spatial distribution of some impurities such as U in lorandite should be known as accurately as possible. In the present work uranium and boron concentrations in some minerals from the Allchar mine (lorandite, realgar, stibnite, orpiment and dolomite) were measured by neutron induced autoradiography. The tracks of sup 1 sup 0 B(n, alpha) and sup 2 sup 3 sup 5 U(n, f) reaction products were recorded by CR-39 and phosphate glass (PSK-50) etched track detectors, respectively. Results showed...

  1. An outbreak of lethal adenovirus infection among different otariid species.

    Science.gov (United States)

    Inoshima, Yasuo; Murakami, Tomoaki; Ishiguro, Naotaka; Hasegawa, Kazuhiro; Kasamatsu, Masahiko

    2013-08-30

    An outbreak of fatal fulminant hepatitis at a Japanese aquarium involved 3 otariids: a California sea lion (Zalophus californianus), a South African fur seal (Arctocephalus pusillus) and a South American sea lion (Otaria flavescens). In a span of about a week in February 2012, 3 otariids showed diarrhea and were acutely low-spirited; subsequently, all three animals died within a period of 3 days. Markedly increased aspartate amino transferase and alanine amino transferase activities were observed. Necrotic hepatitis and eosinophilic intranuclear inclusion bodies in liver hepatocytes and intestinal epithelial cells were observed in the South American sea lion on histological examination. Otarine adenovirus DNA was detected from the livers of all three animals by polymerase chain reaction and determination of the sequences showed that all were identical. These results suggest that a single otarine adenovirus strain may have been the etiological agent of this outbreak of fatal fulminant hepatitis among the different otariid species, and it may be a lethal threat to wild and captive otariids. This is the first evidence of an outbreak of lethal adenovirus infection among different otariid species. Copyright © 2013 Elsevier B.V. All rights reserved.

  2. Species differences in [11C]clorgyline binding in brain

    International Nuclear Information System (INIS)

    Fowler, Joanna S.; Ding, Yu-Shin; Logan, Jean; MacGregor, Robert R.; Shea, Colleen; Garza, Victor; Gimi, Raomond; Volkow, Nora D.; Wang, Gene-Jack; Schlyer, David; Ferrieri, Richard; Gatley, S. John; Alexoff, David; Carter, Pauline; King, Payton; Pappas, Naomi; Arnett, Carroll D.

    2001-01-01

    [ 11 C]Clorgyline selectively binds to MAO A in the human brain. This contrasts with a recent report that [ 11 C]clorgyline (in contrast to other labeled MAO A inhibitors) is not retained in the rhesus monkey brain . To explore this difference, we compared [ 11 C]clorgyline in the baboon brain before and after clorgyline pretreatment and we also synthesized deuterium substituted [ 11 C]clorgyline (and its nor-precursor) for comparison. [ 11 C]Clorgyline was not retained in the baboon brain nor was it influenced by clorgyline pretreatment or by deuterium substitution, contrasting to results in humans. This suggests a species difference in the susceptibility of MAO A to inhibition by clorgyline and represents an unusual example of where the behavior of a radiotracer in the baboon brain does not predict its behavior in the human brain

  3. DISTINCT ANTIBODY SPECIES: STRUCTURAL DIFFERENCES CREATING THERAPEUTIC OPPORTUNITIES

    Science.gov (United States)

    Muyldermans, Serge; Smider, Vaughn V.

    2016-01-01

    Antibodies have been a remarkably successful class of molecules for binding a large number of antigens in therapeutic, diagnostic, and research applications. Typical antibodies derived from mouse or human sources use the surface formed by complementarity determining regions (CDRs) on the variable regions of the heavy chain/light chain heterodimer, which typically forms a relatively flat binding surface. Alternative species, particularly camelids and bovines, provide a unique paradigm for antigen recognition through novel domains which form the antigen binding paratope. For camelids, heavy chain antibodies bind antigen with only a single heavy chain variable region, in the absence of light chains. In bovines, ultralong CDR-H3 regions form an independently folding minidomain, which protrudes from the surface of the antibody and is diverse in both its sequence and disulfide patterns. The atypical paratopes of camelids and bovines potentially provide the ability to interact with different epitopes, particularly recessed or concave surfaces, compared to traditional antibodies. PMID:26922135

  4. Doubling potential of fibroblasts from different species after ionising radiation

    International Nuclear Information System (INIS)

    Macieira-Coelho, A.; Diatloff, C.; Malaise, E.

    1976-01-01

    It is stated that whereas chicken fibroblasts invariably die after a certain number of doublings in vitro, and this fact is never altered by chemical or physical agents, mouse fibroblasts invariably acquire spontaneously an infinite growth potential. In the human species fibroblasts never acquire spontaneously the capacity to divide for ever, although they can become permanent cell lines after treatment with certain viruses. This behaviour of fibroblasts in vitro has been attributed to different nutritional requirements. Experiments are described with human and mouse fibroblasts in which it was found that the response to ionising radiation matches the relative tendencies of the fibroblasts to yield permanent cell lines. Irradiation was commenced during the phase of active proliferation. Human fibroblast cultures irradiated with 100 R stopped dividing earlier than the controls, whereas cultures irradiated with 200, 300 and 500 R had the same lifespan as the control cultures. Cultures irradiated with 400 R showed the longest survival. With mouse fibroblasts the growth curves of the irradiated cells were of the same type as in the controls, but recovery occurred earlier. The results indicated that ionising radiation accelerates a natural phenomenon; in cells with a limited growth potential (chicken) it shortens the lifespan, whereas in cells that can acquire an unlimited growth potential (mouse) it accelerates acquisition of this potential; human fibroblasts showed an intermediate response, since ionising radiation neither established the cultures as with mouse cells nor reduced the number of cells produced as with chicken fibroblasts. Possible explanations for the different behaviour of the species are offered. (U.K.)

  5. Differences in functional traits between invasive and native Amaranthus species under different forms of N deposition.

    Science.gov (United States)

    Wang, Congyan; Zhou, Jiawei; Liu, Jun; Jiang, Kun

    2017-08-01

    Differences in functional traits between invasive and native plant species are believed to determine the invasion success of the former. Increasing amounts of anthropogenic nitrogen (N) are continually deposited into natural ecosystems, which may change the relative occurrence of the different N deposition forms (such as NH 4 -N, NO 3 -N, and CO(NH 2 ) 2 -N) naturally deposited. Under high N deposition scenarios, some invasive species may grow faster, gaining advantage over native species. In a greenhouse experiment, we grew invasive and native Amaranthus species from seed both alone and in competition under simulated N enriched environments with different forms of N over 3 months. Then, we measured different leaf traits (i.e., plant height, leaf length, leaf width, leaf shape index, specific leaf area (SLA), and leaf chlorophyll and N concentrations). Results showed that the competition intensity between A. retroflexus and A. tricolor decreased under N deposition. This may be due to the large functional divergence between A. retroflexus and A. tricolor under simulated N deposition. Phenotypic plasticity of SLA and leaf chlorophyll concentration of A. retroflexus were significantly lower than in A. tricolor. The lower range of phenotypic plasticity of SLA and leaf chlorophyll concentration of A. retroflexus may indicate a fitness cost for plastic functional traits under adverse environments. The restricted phenotypic plasticity of SLA and leaf chlorophyll concentration of A. retroflexus may also stabilize leaf construction costs and the growth rate. Meanwhile, the two Amaranthus species possessed greater plasticity in leaf N concentration under NO 3 -N fertilization, which enhanced their competitiveness.

  6. Differences in functional traits between invasive and native Amaranthus species under different forms of N deposition

    Science.gov (United States)

    Wang, Congyan; Zhou, Jiawei; Liu, Jun; Jiang, Kun

    2017-08-01

    Differences in functional traits between invasive and native plant species are believed to determine the invasion success of the former. Increasing amounts of anthropogenic nitrogen (N) are continually deposited into natural ecosystems, which may change the relative occurrence of the different N deposition forms (such as NH4-N, NO3-N, and CO(NH2)2-N) naturally deposited. Under high N deposition scenarios, some invasive species may grow faster, gaining advantage over native species. In a greenhouse experiment, we grew invasive and native Amaranthus species from seed both alone and in competition under simulated N enriched environments with different forms of N over 3 months. Then, we measured different leaf traits (i.e., plant height, leaf length, leaf width, leaf shape index, specific leaf area (SLA), and leaf chlorophyll and N concentrations). Results showed that the competition intensity between A. retroflexus and A. tricolor decreased under N deposition. This may be due to the large functional divergence between A. retroflexus and A. tricolor under simulated N deposition. Phenotypic plasticity of SLA and leaf chlorophyll concentration of A. retroflexus were significantly lower than in A. tricolor. The lower range of phenotypic plasticity of SLA and leaf chlorophyll concentration of A. retroflexus may indicate a fitness cost for plastic functional traits under adverse environments. The restricted phenotypic plasticity of SLA and leaf chlorophyll concentration of A. retroflexus may also stabilize leaf construction costs and the growth rate. Meanwhile, the two Amaranthus species possessed greater plasticity in leaf N concentration under NO3-N fertilization, which enhanced their competitiveness.

  7. Characterization of abiotic stress genes from different species of eucalyptus

    International Nuclear Information System (INIS)

    Naz, S.; Kausar, H.; Saleem, F.; Zafarullah, A.

    2015-01-01

    The stresses causing dehydration damage to the plant cell like cold, drought, and high salinity are the most frequent environmental stresses that influence plant growth, development and restraining productivity in cultivated areas world-wide. Many drought, salinity and cold inducible genes causing tolerance to environmental stresses in many plants include Dehydrin1 (DHN1), Dehydrin2 (DHN2), Dehydrin10 (DHN10), putative phosphate transporter (Ecpt2), choline monooxygenase (CMO) and DREB/CBF1c genes. Gene specific primer pairs were designed for each gene using DNAStar software. These genes were amplified from different species of eucalyptus such as Eucalyptus camaldulensis, E. globulus, E. tereticornis and E. gunii through PCR. Dehydrin2 gene of E. camaldulensis and dehydrin10 gene of E. globulus were cloned using the TA Cloning Kit with pCR 2.1 vector and sequenced. The Dehydrin genes sequences were submitted to GeneBank: Eucalyptus globulus dehydrin10 gene (Accession No. HG915712) and E. camaldulensis dehydrin 2 gene (Accession No. HG813113). The amino acid sequence of Dehydrin10 from E. globulus showed 97% homology to E. globulus DHN10 (JN052210) and Dehydrin2 from E. camaldulensis presented 94% homology to E. globulus DHN2 (JN052209). These genes can be employed in generating drought resistant crop plants. (author)

  8. Comparative growth performance of different Casuarina species and ...

    African Journals Online (AJOL)

    Variation in growth charactristics, coppicing ability and understory vegetation development was assessed in four Casuarina species (C. equisetifolia, C. junghuhniana, C. cunnighamiana and C. oligodon) grown in Lushoto in the West Usambara Mountains (WUM), Tanzania. The performance of the four species as well as of ...

  9. The Drosophila ananassae species complex: Evolutionary relationships among different members

    Directory of Open Access Journals (Sweden)

    Singh B.N.

    2013-01-01

    Full Text Available Information about genetic structure and historical demography of natural populations is central to understanding how natural selection changes genomes. Drosophila ananassae is a widespread species occurring in geographically isolated or partially isolated populations and provides a unique opportunity to investigate population structure and molecular variation. D. ananassae and its closely related species serve as a widely used model in population and evolutionary genetics. The ananassae subgroup belongs to the melanogaster species group. This subgroup contains 22 described species distributed mainly throughout Southeast Asia, with some species expanding into northeastern Australia, South Pacific and Indian subcontinent and Africa. Within the ananassae subgroup, three species complexes-ananassae, bipectinata and ercepeae have been recognized based on male genital morphology. D. ananassae and its relatives have many advantages as a model of genetic differentiation and speciation. In this review, distribution, phylogenies, hybridization, sexual isolation among D. ananassae complex have been discussed. The complex of several cryptic island species provides a useful model for evolutionary studies dealing with the mechanisms of speciation.

  10. The Determination of Different Germination Applications on Some Sage Species

    OpenAIRE

    İmge İhsane Özcan; Olcay Arabacı; Neval Gül Öğretmen

    2014-01-01

    Sage, which belongs to Labiatae family and contains essential oils, is a typical Mediterranean plant. Being an important and one of the biggest species of this family, sage is said to be named being inspired by the word "Salveo" which means “saver” or “healer” in Latin. Salvia genus is represented by about 900 species on earth. There are 97 natural species of this genus in Turkey’s flora. There is dormancy in seeds of Salvia genus and having mucilage-like seed-coats is an inhibiting factor fo...

  11. 64Cu-ATSM and 18FDG PET uptake and 64Cu-ATSM autoradiography in spontaneous canine tumors: comparison with pimonidazole hypoxia immunohistochemistry

    Directory of Open Access Journals (Sweden)

    Hansen Anders E

    2012-06-01

    Full Text Available Abstract Background The aim of this study was to compare 64Cu-diacetyl-bis(N4-methylsemicarbazone (64Cu-ATSM and 18FDG PET uptake characteristics and 64Cu-ATSM autoradiography to pimonidazole immunohistochemistry in spontaneous canine sarcomas and carcinomas. Methods Biopsies were collected from individual tumors between approximately 3 and 25 hours after the intravenous injection of 64Cu-ATSM and pimonidazole. 64Cu-ATSM autoradiography and pimonidazole immunostaining was performed on sectioned biopsies. Acquired 64Cu-ATSM autoradiography and pimonidazole images were rescaled, aligned and their distribution patterns compared. 64Cu-ATSM and 18FDG PET/CT scans were performed in a concurrent study and uptake characteristics were obtained for tumors where available. Results Maximum pimonidazole pixel value and mean pimonidazole labeled fraction was found to be strongly correlated to 18FDG PET uptake levels, whereas more varying results were obtained for the comparison to 64Cu-ATSM. In the case of the latter, uptake at scans performed 3 h post injection (pi generally showed strong positive correlated to pimonidazole uptake. Comparison of distribution patterns of pimonidazole immunohistochemistry and 64Cu-ATSM autoradiography yielded varying results. Significant positive correlations were mainly found in sections displaying a heterogeneous distribution of tracers. Conclusions Tumors with high levels of pimonidazole staining generally displayed high uptake of 18FDG and 64Cu-ATSM (3 h pi.. Similar regional distribution of 64Cu-ATSM and pimonidazole was observed in most heterogeneous tumor regions. However, tumor and hypoxia level dependent differences may exist with regard to the hypoxia specificity of 64Cu-ATSM in canine tumors.

  12. Application of quantitative autoradiography to the measurement of biochemical processes in vivo

    International Nuclear Information System (INIS)

    Sokoloff, L.

    1985-01-01

    Quantitative autoradiography makes it possible to measure the concentrations of isotopes in tissues of animals labeled in vivo. In a few cases, the administration of a judiciously selected labeled chemical compound and a properly designed procedure has made it possible to use this capability to measure the rate of a chemical process in animals in vivo. Emission tomography, and particularly positron emission tomography, provides a means to extend this capability to man and to assay the rates of biochemical processes in human tissues in vivo. It does not, however, obviate the need to adhere to established principles of chemical and enzyme kinetics and tracer theory. Generally, all such methods, whether to be used in man with positron emission tomography or in animals with autoradiography, must first be developed by research in animals with autoradiography, because it is only in animals that the measurements needed to validate the basic assumptions of the methods can be tested and evaluated

  13. Down-regulation of rat kidney calcitonin receptors by salmon calcitonin infusion evidence by autoradiography

    International Nuclear Information System (INIS)

    Bouizar, Z.; Rostene, W.H.; Milhaud, G.

    1987-01-01

    In treating age-related osteoporosis and Paget disease of bone, it is of major importance to avoid an escape phenomenon that would reduce effectiveness of the treatment. The factors involved in the loss of therapeutic efficacy with administration of large pharmacological doses of the hormone require special consideration. Down-regulation of the hormone receptors could account for the escape phenomenon. Specific binding sites for salmon calcitonin (sCT) were characterized and localized by autoradiography on rat kidney sections incubated with 125 I-labeled sCT. Autoradiograms demonstrated a heterogeneous distribution of 125 I-labeled sCT binding sites in the kidney, with high densities in both the superficial layer of the cortex and the outer medulla. Infusion of different doses of unlabeled sCT by means of Alzet minipumps for 7 days produced rapid changes in plasma calcium, phosphate, and magnesium levels, which were no longer observed after 2 or 6 days of treatment. Besides, infusion of high doses of sCT induced down-regulation of renal sCT binding sites located mainly in the medulla, where calcitonin (CT) has been shown to exert it physiological effects on water and ion reabsorption. These data suggest that the resistance to high doses of sCT often observed during long-term treatment of patients may be the consequence of not only bone-cell desensitization but also down-regulation of CT-sensitive kidney receptor sites

  14. Manganese dosimetry: species differences and implications for neurotoxicity.

    Science.gov (United States)

    Aschner, Michael; Erikson, Keith M; Dorman, David C

    2005-01-01

    Manganese (Mn) is an essential mineral that is found at low levels in food, water, and the air. Under certain high-dose exposure conditions, elevations in tissue manganese levels can occur. Excessive manganese accumulation can result in adverse neurological, reproductive, and respiratory effects in both laboratory animals and humans. In humans, manganese-induced neurotoxicity (manganism) is the overriding concern since affected individuals develop a motor dysfunction syndrome that is recognized as a form of parkinsonism. This review primarily focuses on the essentiality and toxicity of manganese and considers contemporary studies evaluating manganese dosimetry and its transport across the blood-brain barrier, and its distribution within the central nervous system (CNS). These studies have dramatically improved our understanding of the health risks posed by manganese by determining exposure conditions that lead to increased concentrations of this metal within the CNS and other target organs. Most individuals are exposed to manganese by the oral and inhalation routes of exposure; however, parenteral injection and other routes of exposure are important. Interactions between manganese and iron and other divalent elements occur and impact the toxicokinetics of manganese, especially following oral exposure. The oxidation state and solubility of manganese also influence the absorption, distribution, metabolism, and elimination of manganese. Manganese disposition is influenced by the route of exposure. Rodent inhalation studies have shown that manganese deposited within the nose can undergo direct transport to the brain along the olfactory nerve. Species differences in manganese toxicokinetics and response are recognized with nonhuman primates replicating CNS effects observed in humans while rodents do not. Potentially susceptible populations, such as fetuses, neonates, individuals with compromised hepatic function, individuals with suboptimal manganese or iron intake, and

  15. Effect of forage quality in faeces from different ruminant species fed high and low quality forage

    DEFF Research Database (Denmark)

    Jalali, A R; Nørgaard, P; Nielsen, M O

    2010-01-01

    Effect of forage quality in faeces from different ruminant species fed high and low quality forage......Effect of forage quality in faeces from different ruminant species fed high and low quality forage...

  16. Conductivity test in seeds of different passion flower species

    Directory of Open Access Journals (Sweden)

    Sara Mira

    2015-06-01

    Full Text Available The objective of this work was to evaluate the use of the conductivity test as a means of predicting seed viability in seven Passiflora species: P. alata, P. cincinnata, P. edulis f. edulis, P. edulis f. flavicarpa, P. morifolia, P. mucronata, and P. nitida. Conductivity of non-desiccated (control, desiccated, and non-desiccated cryopreserved seeds was determined and related to their germination percentage. The obtained results suggest that the electrical conductivity test has potential as a germination predictor for P. edulis f. flavicarpa seed lots, but not for the other tested species.

  17. Species differences in the sensitivity of avian embryos to methylmercury

    Science.gov (United States)

    Heinz, G.H.; Hoffman, D.J.; Klimstra, J.D.; Stebbins, K.R.; Kondrad, S.L.; Erwin, C.A.

    2009-01-01

    We injected doses of methylmercury into the air cells of eggs of 26 species of birds and examined the dose-response curves of embryo survival. For 23 species we had adequate data to calculate the median lethal concentration (LC50). Based on the dose-response curves and LC50s, we ranked species according to their sensitivity to injected methylmercury. Although the previously published embryotoxic threshold of mercury in game farm mallards (Anas platyrhynchos) has been used as a default value to protect wild species of birds, we found that, relative to other species, mallard embryos are not very sensitive to injected methylmercury; their LC50 was 1.79 ug/g mercury on a wet-weight basis. Other species we categorized as also exhibiting relatively low sensitivity to injected methylmercury (their LC50s were 1 ug/g mercury or higher) were the hooded merganser (Lophodytes cucullatus), lesser scaup (Aythya affinis), Canada goose (Branta canadensis), double-crested cormorant (Phalacrocorax auritus), and laughing gull (Larus atricilla). Species we categorized as having medium sensitivity (their LC50s were greater than 0.25 ug/g mercury but less than 1 ug/g mercury) were the clapper rail (Rallus longirostris), sandhill crane (Grus canadensis), ring-necked pheasant (Phasianus colchicus), chicken (Gallus gallus), common grackle (Quiscalus quiscula), tree swallow (Tachycineta bicolor), herring gull (Larus argentatus), common tern (S terna hirundo), royal tern (Sterna maxima), Caspian tern (Sterna caspia), great egret (Ardea alba), brown pelican (Pelecanus occidentalis), and anhinga (Anhinga anhinga). Species we categorized as exhibiting high sensitivity (their LC50s were less than 0.25 ug/g mercury) were the American kestrel (Falco sparverius), osprey (Pandion haliaetus), white ibis (Eudocimus albus), snowy egret (Egretta thula), and tri-colored heron (Egretta tricolor). For mallards, chickens, and ring-necked pheasants (all species for which we could compare the toxicity of our

  18. Modification in the assembly technique of histological sections for analysis of spatial distribution of boron by autoradiography

    International Nuclear Information System (INIS)

    Portu, A; Carpano, M; Dagrosa, A; Pozzi, E; Thorp, S; Curotto, P; Cabrini, R L; Saint Martin, G

    2012-01-01

    The Boron Neutron Capture Therapy (BNCT) is a modality for the treatment of cancer, based on the capture reaction 10 B(n,α) 7 Li. The emitted particles are highly transferred linear of energy and have a short range in tissue (10 μ). Therefore, if the boron is selectively accumulates in tumor cellulo, the damage will be limited to preserving normal cellulo. Thus, the knowledge of the location of 10 B in the different structures of biological tissues as tumor and surrounding tissue, is essential when considering BNCT treatment (Barth et al., 2005). Neutron autoradiography is one of the few methods that allow studying the distribution spatial of elements emitters in a material containing such. As part of BNCT, the first step in performing autoradiography involves placing a freeze tissue section on a nuclear track detector (SSNTD) (Wittig et al., 2008). For this purpose, tissue samples are fixed in N 2 (liq) when they are resected after infusion boronated compound. The sample-detector arrangement is irradiated with thermal neutrons and elements cast in the capture reaction zones produce latent damage SSNTD. Chemically attacking the detector, this latent trace level can be amplified by optical microscopy. Thus, the distribution of 10 B in biological samples can be evaluated, so that this technique is suitable for studying the uptake of boron compounds for the different histological structures. In our laboratory, we have developed neutron autoradiography and has been applied to the study of different biological models (Portu et al., 2011a). In particular, the study conducted by the micro-distribution 10 B in tumors from nude mice model of cutaneous melanomas injected with boronophenylalanine (BPA) (Carpano et al, 2010;. Portu et al, 2011b.). Still using means of support for the sample to be cut, as OCTTM, the lack of structure of necrotic areas of tumors such causes tearing of these regions in the cutting process, which prevents achieving adequate for analysis sections

  19. Research Note Livestock utilisation of grass species at different ...

    African Journals Online (AJOL)

    Utilisation of annual plants occurring at the 0m zone from water was greater than that of the same plant species growing at further distances. Periodic closure of water points aimed at reducing grazing pressure has been indicated as a method to promote production of forage around water points. With the exception of ...

  20. Occurrence of different Plasmodium species in malaria patients in ...

    African Journals Online (AJOL)

    ... of Giemsa and Leishman stained smears. Results showed that the prevalence rate of malaria parasite in the area was 62.0%. Only two species namely Plasmodium falciparum and P. vivax were identified with the former predominating (99.2%). International Journal of Natural and Applied Sciences Vol. 2 (4) 2006: pp.

  1. chromosome study of some grasshopper species from different

    African Journals Online (AJOL)

    Admin

    ABSTRACT: Around 200 grasshopper species have been identified in Ethiopia, hitherto. The diversity and economic importance of Ethiopian grasshoppers notwithstanding, there is only few studies done on their taxonomy, distribution and ecology. Additionally, no report on the karyology of Ethiopian grasshoppers is ...

  2. Transesterification of oil extracted from different species of algae for ...

    African Journals Online (AJOL)

    In the current study, biodiesel production efficiency of Chlorella vulgaris, Rhizoclonium hieroglyphicum and mixed algae culture was measured by transesterification process. Growth rate of algal species was measured on the basis of increase in their dry matter in various media. Protein, carbohydrates and lipids in all ...

  3. Responses of Calathea species in different growing media ...

    African Journals Online (AJOL)

    ... substrate of top soil and poultry manure mixtures. Although C.nigerica produced higher number of leaves and taller plants than C. zebrina, the latter may be preferred because of its more attractive leaves and its many plantlets that quickly fill the growing container. Key words: growth , container, media, Calathea Species.

  4. Four Pathogenic Candida Species Differ in Salt Tolerance

    Czech Academy of Sciences Publication Activity Database

    Krauke, Yannick; Sychrová, Hana

    2010-01-01

    Roč. 61, č. 4 (2010), s. 335-339 ISSN 0343-8651 R&D Projects: GA MŠk(CZ) LC531 Grant - others:EC(XE) MRTN-CT-2004-512481 Institutional research plan: CEZ:AV0Z50110509 Keywords : candida species * salt tolerance * potassium homeostasis Subject RIV: EE - Microbiology, Virology Impact factor: 1.510, year: 2010

  5. Study of sperm proteins in different mammalian species

    OpenAIRE

    Pohlová, Alžběta

    2016-01-01

    Reproduction is an essential feature of all animals and a fundamental step to produce new generations. Study of sperm proteins is crucial for understanding of the sperm-egg recognition. We searched out sperm surface proteins involving in the zona pellucida (ZP) binding and studied whether these proteins are preserved throughout mammalian species. Indirect immunofluorescent technique was used to test a panel of monoclonal antibodies prepared against boar sperm surface proteins on spermatozoa o...

  6. Coffee senna: an important species for different ethnic groups

    OpenAIRE

    Márcia Lombardo

    2014-01-01

    Popularly known as coffee senna, Senna occidentalis (L.) Link(synonym: Cassia occidentalis L.) is a ubiquitous plant appreciated by many tropical communities, especially as a herbal medicine. It has been widely used for centuries, principally for the treatmentof weakness, constipation, liver disorders and skin infections. Due to its poisonous potential tograzing animals, coffee senna is included in several toxicological studies and constitutes a promising species in the study of new active su...

  7. Coffee senna: an important species for different ethnic groups

    Directory of Open Access Journals (Sweden)

    Márcia Lombardo

    2014-07-01

    Full Text Available Popularly known as coffee senna, Senna occidentalis (L. Link(synonym: Cassia occidentalis L. is a ubiquitous plant appreciated by many tropical communities, especially as a herbal medicine. It has been widely used for centuries, principally for the treatmentof weakness, constipation, liver disorders and skin infections. Due to its poisonous potential tograzing animals, coffee senna is included in several toxicological studies and constitutes a promising species in the study of new active substances.

  8. Albatross species demonstrate regional differences in North Pacific marine contamination.

    Science.gov (United States)

    Finkelstein, Myra; Keitt, Bradford S; Croll, Donald A; Tershy, Bernie; Jarman, Walter M; Rodriguez-Pastor, Sue; Anderson, David J; Sievert, Paul R; Smith, Donald R

    2006-04-01

    Recent concern about negative effects on human health from elevated organochlorine and mercury concentrations in marine foods has highlighted the need to understand temporal and spatial patterns of marine pollution. Seabirds, long-lived pelagic predators with wide foraging ranges, can be used as indicators of regional contaminant patterns across large temporal and spatial scales. Here we evaluate contaminant levels, carbon and nitrogen stable isotope ratios, and satellite telemetry data from two sympatrically breeding North Pacific albatross species to demonstrate that (1) organochlorine and mercury contaminant levels are significantly higher in the California Current compared to levels in the high-latitude North Pacific and (2) levels of organochlorine contaminants in the North Pacific are increasing over time. Black-footed Albatrosses (Phoebastria nigripes) had 370-460% higher organochlorine (polychlorinated biphenyls [PCBs], dichlorodiphenyltrichloroethanes [DDTs]) and mercury body burdens than a closely related species, the Laysan Albatross (P. immutabilis), primarily due to regional segregation of their North Pacific foraging areas. PCBs (the sum of the individual PCB congeners analyzed) and DDE concentrations in both albatross species were 130-360% higher than concentrations measured a decade ago. Our results demonstrate dramatically high and increasing contaminant concentrations in the eastern North Pacific Ocean, a finding relevant to other marine predators, including humans.

  9. Three different Hepatozoon species in domestic cats from southern Italy.

    Science.gov (United States)

    Giannelli, Alessio; Latrofa, Maria Stefania; Nachum-Biala, Yaarit; Hodžić, Adnan; Greco, Grazia; Attanasi, Anna; Annoscia, Giada; Otranto, Domenico; Baneth, Gad

    2017-08-01

    Three species of Hepatozoon, namely, Hepatozoon felis, Hepatozoon canis and Hepatozoon silvestris may affect domestic and/or wild felids. Although hepatozoonosis has been documented in a wide range of mammal species, data on cats are limited. To investigate the occurrence of these pathogens in cats, blood samples were collected from animals living in three provinces of southern Italy (Bari, Lecce, and Matera), and molecularly analysed by PCR amplification and sequencing of segments of the 18S rRNA gene. Out of 196 blood samples collected, Hepatozoon spp. DNA was amplified in ten cats (5.1%, CI: 3%-9%), with the majority of infected animals from Matera (8/34, 23.5%) and one each from the other two provinces. BLAST analysis revealed the highest nucleotide identity with sequences of H. canis, H. felis and H. silvestris deposited in GenBank. Results of this study indicate that these three species of Hepatozoon infect domestic cats in Italy. This is the first report of H. silvestris infection in a domestic cat. Copyright © 2017 Elsevier GmbH. All rights reserved.

  10. Assignment of two ultrastructures formed by a mixture of hexonamides using autoradiography and electron microscopy

    NARCIS (Netherlands)

    Boettcher, Christoph; Boekema, Egbert J.; Fuhrhop, Juergen-H.

    1990-01-01

    The combined application of autoradiography and electron microscopy allowed the assignment of molecular components to individual micellar fibres in a mixed gel. Resolution was of the order of 0·1 µm. As a result, it was shown that bimolecular sheets of N-dodecyl-L-mannonamide (= L-Man-12) completely

  11. Study using macroscopic autoradiography of the distribution of vanadium 48 in the rat and mouse

    International Nuclear Information System (INIS)

    Serhrouchni, M.

    1982-07-01

    Study of vanadium 48 distribution in the laboratory animal by macroscopic autoradiography. Vanadium 48 bioavailability is zero after oral administration and good after pulmonary administration. It is distributed throughout the body with a particular affinity for bone and teeth. Study of perinatal metabolism [fr

  12. Thymidine plaque autoradiography of thymidine kinase-positive and thymidine kinase-negative herpesviruses

    International Nuclear Information System (INIS)

    Tenser, R.B.; Jones, J.C.; Ressel, S.J.; Fralish, F.A.

    1983-01-01

    Plaques formed by herpes simplex virus (HSV), pseudorabies virus, and varicella-zoster virus were studied by plaque autoradiography after [ 14 C]thymidine labeling. Standard thymidine kinase-positive (TK+) viruses and TK- mutants of HSV types 1 and 2 and pseudorabies virus were studied, including cell cultured viruses and viruses isolated from animals. Autoradiography was performed with X-ray film with an exposure time of 5 days. After development of films, TK+ plaques showed dark rims due to isotope incorporation, whereas TK- plaques were minimally labeled. Plaque autoradiography of stock TK- viruses showed reversion frequencies to the TK+ phenotype of less than 10(-3). Autoradiography indicated that TK- virus retained the TK- phenotype after replication in vivo. In addition, it was shown that TK- HSV could be isolated from mouse trigeminal ganglion tissue after corneal inoculation of TK- HSV together with TK+ HSV. The plaque autoradiographic procedure was very useful to evaluate proportions of TK+ and TK- virus present in TK+-TK- virus mixtures

  13. Morphological Caste Differences in Three Species of the Neotropical Genus Clypearia (Hymenoptera: Polistinae: Epiponini

    Directory of Open Access Journals (Sweden)

    Giovanna Tocchini Felippotti

    2010-01-01

    Full Text Available Clypearia is a rare genus of swarm-founding Neotropical wasp whose biology is very little known. Morphological castes differences, condition of ovaries, relative age, and color pattern differences were analyzed in three species of Clypearia. Physiological differences and low morphometric differentiation between queens and workers were present in all species studied, indicating that these species are characterized by “physiological caste only”. We suggest that caste determination in the three Clypearia species studied is postimaginal.

  14. Resolution, sensitivity and precision with autoradiography and small animal positron emission tomography: implications for functional brain imaging in animal research

    International Nuclear Information System (INIS)

    Schmidt, Kathleen C.; Smith, Carolyn Beebe

    2005-01-01

    Quantitative autoradiographic methods for in vivo measurement of regional rates of cerebral blood flow, glucose metabolism, and protein synthesis contribute significantly to our understanding of physiological and biochemical responses of the brain to changes in the environment. A disadvantage of these autoradiographic methods is that experimental animals can be studied only once. With the advent of small animal positron emission tomography (PET) and with increases in the sensitivity and spatial resolution of scanners it is now possible to use adaptations of these methods in experimental animals with PET. These developments allow repeated studies of the same animal, including studies of the same animal under different conditions, and longitudinal studies. In this review we summarize the tradeoffs between the use of autoradiography and small animal PET for functional brain imaging studies in animal research

  15. Biodistribution study of [I-123] ADAM in mice brain using quantitative autoradiography

    International Nuclear Information System (INIS)

    Lin, K.J.; Yen, T.C.; Tzen, K.Y.; Ye, X.X.; Hwang, J.J.; Wey, S.P.; Ting, G.

    2002-01-01

    Aim: Autoradiography with radioluminography is a delicate method to characterize newly developed radiotracers and to apply them to pharmacological studies. Herein, we reported a biodistribution result of [I-123] ADAM (2-((2-((dimethylamino)methyl)phenyl)thio)-5- iodophenylamine) in mice brain quantitatively using imaging plates. Materials and Methods: 1mCi [I-123] ADAM was injected into male ICR mice through tail veins. Brains were removed at sequential time points ranging from 0.5hr to 4hr after injection. The whole brain was cut into 14mm thick coronal sections using a cyrotome. The sections were thaw-mounted on glass plate and apposed placed on an imaging plate with filter paper standards for 24 hours. Imaging reading was done by a Fuji FLA5000 device. Regions of interest were placed on the globus pallidus, hypothalamus, substantia nigra, raphe nuclei and cerebellum corresponding to the sterotaxic atlas, and the PSL/mm 2 values were measured. The specific binding was expressed as the ratios of (targets - cerebellum) to cerebellum. Results: Autoradiography study of brain showed that the [I-123] ADAM was accumulated at serotonin transporter rich sites, including the olfactory tubercle, globus pallidus, thalamus nuclei, hypothalamus, substantia nigra, interpeduncular nucleus, amygdala and raphe nuclei. Biodistribution of [I-123] ADAM in mice brain using quantitative autoradiography method showed a high specific binding in the substantia nigra and hypothalamus and the time-activity curve peaked at 120 min post-injection. Compatible specific binding result was achieved in the region of hypothalamus as compared with previous study by other group using conventional tissue micro-dissection method (Synapse 38:403-412, 2000). However, higher specific binding was observed in certain small brain regions including substantia nigra, raphe nuclei due to improved spatial resolution of the quantitative autoradiography technique. Conclusion: Our result showed that the

  16. Laminar pattern of cholinergic and adrenergic receptors in rat visual cortex using quantitative receptor autoradiography

    International Nuclear Information System (INIS)

    Schliebs, R.; Walch, C.

    1989-01-01

    The laminar distribution of muscarinic acetylcholine receptors, including the M1-receptor subtype, of beta-adrenergic receptors, and noradrenaline uptake sites, was studied in the adult rat visual, frontal, somatosensory and motor cortex, using quantitative receptor autoradiography. In the visual cortex, the highest density of muscarinic acetylcholine receptors was found in layer I. From layer II/III to layer V binding decreases continueously reaching a constant binding level in layers V and VI. This laminar pattern of muscarinic receptor density differs somewhat from that observed in the non-visual cortical regions examined: layer II/III contained the highest receptor density followed by layer I and IV: lowest density was found in layer V and VI. The binding profile of the muscarinic cholinergic M1-subtype through the visual cortex shows a peak in cortical layer II and in the upper part of layer VI, whereas in the non-visual cortical regions cited the binding level was high in layer II/III, moderate in layer I and IV, and low in layer VI. Layers I to IV of the visual cortex contained the highest beta-adrenergic receptor densities, whereas only low binding levels were observed in the deeper layers. A similar laminar distribution was found also in the frontal, somatosensory and motor cortex. The density of noradrenaline uptake sites was high in all layers of the cortical regions studied, but with noradrenaline uptake sites somewhat more concentrated in the superficial layers than in deeper ones. The distinct laminar pattern of cholinergic and noradrenergic receptor sites indicates a different role for acetylcholine and noradrenaline in the functional anatomy of the cerebral cortex, and in particular, the visual cortex. (author)

  17. The jellyfish and its polyp: a comparative study of gene expression monitored by the protein patterns using two-dimensional gels with double-label autoradiography

    International Nuclear Information System (INIS)

    Bally, Andreas; Schmid, Volker

    1988-01-01

    The life cycle of Podocoryne carnea (Coelenterata. Anthomedusae) shows several distinct stages which differ considerably in terms of their ecology, morphology, cellular composition and ultra structure. Using two-dimensional gel electrophoresis and a new method of double-label autoradiography, we show here for the first time for metagenic hydrozoans that only minor differences in gene expression exist between the various life cycle stages. Our results demonstrate the high resolution power of these techniques and show that the different life stages of P. carnea remain rather similar on the protein level (author)

  18. Differences in olfactory species recognition in the females of two Australian songbird species

    NARCIS (Netherlands)

    Krause, E.T.; Brummel, C.; Kohlwey, S.; Baier, M.C.; Müller, C.; Bonadonna, F.; Caspers, B.A.

    2014-01-01

    Although birds have recently been shown to possess olfactory abilities and to use chemical cues in communication, limited effort has been made to demonstrate the use of odorants in social contexts. Even less is known regarding the use of odorants in species recognition. The ability to recognize

  19. Two reported cytotypes of the emergent orchid model species Erycina pusilla are two different species

    NARCIS (Netherlands)

    Yeh, Hsuan Yu; Lin, Choun Sea; Jong, de Hans; Chang, Song-Bin

    2017-01-01

    Each species is characterized by a specific set of chromosomes, which is described as the chromosome portrait or karyotype. In general, such a karyotype is the same for all individuals in the population. An exception to that rule has recently been found in the orchid Erycina pusilla, which has

  20. Cross-Species Gene Expression Analysis of Species Specific Differences in the Preclinical Assessment of Pharmaceutical Compounds

    Science.gov (United States)

    Okyere, John; Oppon, Ekow; Dzidzienyo, Daniel; Sharma, Lav; Ball, Graham

    2014-01-01

    Animals are frequently used as model systems for determination of safety and efficacy in pharmaceutical research and development. However, significant quantitative and qualitative differences exist between humans and the animal models used in research. This is as a result of genetic variation between human and the laboratory animal. Therefore the development of a system that would allow the assessment of all molecular differences between species after drug exposure would have a significant impact on drug evaluation for toxicity and efficacy. Here we describe a cross-species microarray methodology that identifies and selects orthologous probes after cross-species sequence comparison to develop an orthologous cross-species gene expression analysis tool. The assumptions made by the use of this orthologous gene expression strategy for cross-species extrapolation is that; conserved changes in gene expression equate to conserved pharmacodynamic endpoints. This assumption is supported by the fact that evolution and selection have maintained the structure and function of many biochemical pathways over time, resulting in the conservation of many important processes. We demonstrate this cross-species methodology by investigating species specific differences of the peroxisome proliferator-activator receptor (PPAR) α response in rat and human. PMID:24823806

  1. Atomic force microscopic neutron-induced alpha-autoradiography for boron imaging in detailed cellular histology

    International Nuclear Information System (INIS)

    Amemiya, K.; Takahashi, H.; Fujita, K.; Nakazawa, M.; Yanagie, H.; Eriguchi, M.; Nakagawa, Y.; Sakurai, Y.

    2006-01-01

    The information on subcellular microdistribution of 10 B compounds a cell is significant to evaluate the efficacy of boron neutron capture therapy (BNCT) because the damage brought by the released alpha/lithium particles is highly localized along their path, and radiation sensitivity is quite different among each cell organelles. In neutron-induced alpha-autoradiography (NIAR) technique, 10 B can be measured as tracks for the energetic charged particles from 10 B(n, alpha) 7 Li reactions in solid state track detectors. To perform the NIAR at intracellular structure level for research of 10 B uptake and/or microdosimetry in BNCT, we have developed high-resolution NIAR method with an atomic force microscope (AFM). AFM has been used for analyses of biological specimens such as proteins, DNAs and surface of living cells have, however, intracellular detailed histology of cells has been hardly resolved with AFM since flat surface of sectioned tissue has quite less topographical contrast among each organelle. In our new sample preparation method using UV processing, materials that absorb UV in a semi-thin section are selectively eroded and vaporized by UV exposure, and then fine relief for cellular organelles such as mitochondria, endoplasmic reticulum, filament structure and so on reveals on flat surface of the section, which can be observed with an AFM. The imaging resolution was comparable to TEM imaging of cells. This new method provides fast and cost-effective observation of histological sections with an AFM. Combining this method with NIAR technique, intracellular boron mapping would be possible. (author)

  2. Species pools along contemporary environmental gradients represent different levels of diversification

    NARCIS (Netherlands)

    Bartish, I.V.; Hennekens, S.M.; Aidoud, A.; Hennion, F.; Prinzing, A.

    2010-01-01

    Aim - Within a region, different habitat types are characterized by different species and some habitat types have higher species diversities than others. Different habitat types are also characterized by different phylogenetic clades. However, it is not known whether – within a given region – some

  3. Molecular Evidence of Different Rickettsia Species in Villeta, Colombia.

    Science.gov (United States)

    Faccini-Martínez, Álvaro A; Ramírez-Hernández, Alejandro; Forero-Becerra, Elkin; Cortés-Vecino, Jesús A; Escandón, Patricia; Rodas, Juan D; Palomar, Ana M; Portillo, Aránzazu; Oteo, José A; Hidalgo, Marylin

    2016-02-01

    The aim of this work was to detect and identify Rickettsia species in ticks collected in rural areas of Villeta, Colombia. Tick specimens were collected from domestic animals and walls of houses in five rural villages of Villeta town and from humans in Naranjal village (same town). Moreover, a flea collected from the same area was also processed. DNA was extracted and tested by conventional, semi-nested, and nested PCR reactions targeting rickettsial genes. In the ticks collected from humans from Naranjal village, a nymph of Amblyomma cajennense sensu lato was amplified using primers for ompA and sequenced (100% identity with "Candidatus Rickettsia amblyommii"). Last, three amplicons from the Ctenocephalides felis flea, corresponding to gltA, ompB, and 16S rRNA genes, showed high identity with R. felis (98.5%, 97.3%, and 99.2%, respectively) and "Candidatus Rickettsia asemboensis" (99.7% and 100%, respectively). To our knowledge, these results correspond to the first molecular detection in Colombia of "Candidatus Rickettsia amblyommii" and "Ca. Rickettsia asemboensis" in fleas.

  4. Comparison of Different Wood Species as Raw Materials for Bioenergy

    Directory of Open Access Journals (Sweden)

    Bojana Klašnja

    2013-12-01

    Full Text Available Background and Purpose: Most projections of the global energy use predict that biomass will be an important component of primary energy sources in the coming decades. Short rotation plantations have the potential to become an important source of renewable energy in Europe because of the high biomass yields, a good combustion quality as solid fuel, ecological advantages and comparatively low biomass production costs. Materials and Methods: In this study, the wood of black locust Robinia pseudoacacia, white willow Salix alba L., poplars Populus deltoides and Populus x euramericana cl.I-214, aged eight years were examined. Immediately after the felling, sample discs were taken to assess moisture content, ash content, the width of growth rings, wood densities and calorific values, according to the standard methodology. Results:The mean values of willow, poplar and black locust wood density were 341 kg/m3, 336 kg/m3 and 602 kg/m3,respectively. The average heating values of willow poplar and black locust wood were 18.599 MJ/kg, 18.564 MJ/kg and 21.196 MJ/kg, respectively. The FVI index (average values was higher for black locust (17.186 than for poplar and willow clones, which were similar: 11.312 and 11.422 respectively. Conclusions: Black locust wood with a higher density, calorific value and ash content compared to poplar and willow wood proved to be a more suitable raw material as RES. However, it is very important, from the aspect of the application of wood of these tree species as RES, to also consider the influence of the biomass yield per unit area of the plantations established as “energy plantations”.

  5. The calming effect of maternal carrying in different mammalian species

    Directory of Open Access Journals (Sweden)

    Gianluca eEsposito

    2015-04-01

    Full Text Available Attachment theory postulates that mothers and their infants possess some basic physiological mechanisms that favour their dyadic interaction and bonding. Many studies have focused on the maternal physiological mechanisms that promote attachment (e.g. mothers’ automatic responses to infant faces and/or cries, and relatively less have examined infant physiology. Thus, the physiological mechanisms regulating infant bonding behaviors remain largely undefined. This review elucidates some of the neurobiological mechanisms governing social bonding and cooperation in humans by focusing on maternal carrying and its beneficial effect on mother-infant interaction in mammalian species (e.g. in humans, big cats and rodents. These studies show that infants have a specific calming response to maternal carrying. A human infant carried by his/ her walking mother exhibits a rapid heart rate decrease, and immediately stops voluntary movement and crying compared to when he/ she is held in a sitting position. Furthermore, strikingly similar responses were identified in mouse rodents, who exhibit immobility, diminished ultra-sonic vocalizations and heart rate. In general, the studies described in the current review demonstrate the calming effect of maternal carrying to be comprised of a complex set of behavioral and physiological components, each of which has a specific postnatal time window and is orchestrated in a well-matched manner with the maturation of the infants. Such reactions could have been evolutionarily adaptive in mammalian mother-infant interactions. The findings have implications for parenting practices in developmentally normal populations. In addition, we propose that infants’ physiological response may be useful in clinical assessments as we discuss possible implications on early screening for child psychopathology (e.g. Autism Spectrum Disorders, and Perinatal Brain Disorders.

  6. Enhancement of biodiesel production from different species of algae

    Directory of Open Access Journals (Sweden)

    El-Moneim M. R. Afify, Abd

    2010-12-01

    Full Text Available Eight algal species (4 Rhodo, 1 chloro and 1 phaeophycean macroalgae, 1 cyanobacterium and 1 green microalga were used for the production of biodiesel using two extraction solvent systems (Hexane/ether (1:1, v/v and (Chloroform/ methanol (2:1, v/v. Biochemical evaluations of algal species were carried out by estimating biomass, lipid, biodiesel and sediment (glycerin and pigments percentages. Hexane/ ether (1:1, v/v extraction solvent system resulted in low lipid recoveries (2.3-3.5% dry weight while; chloroform/methanol (2: 1, v/v extraction solvent system was proved to be more efficient for lipid and biodiesel extraction (2.5 – 12.5% dry weight depending on algal species. The green microalga Dictyochloropsis splendida extract produced the highest lipid and biodiesel yield (12.5 and 8.75% respectively followed by the cyanobacterium Spirulina platensis (9.2 and 7.5 % respectively. On the other hand, the macroalgae (red, brown and green produced the lowest biodiesel yield. The fatty acids of Dictyochloropsis splendida Geitler biodiesel were determined using gas liquid chromatography. Lipids, biodiesel and glycerol production of Dictyochloropsis splendida Geitler (the promising alga were markedly enhanced by either increasing salt concentration or by nitrogen deficiency with maximum production of (26.8, 18.9 and 7.9 % respectively at nitrogen starvation condition.

    Ocho especies de algas (4 Rhodo, 1 cloro y 1 macroalgas phaeophycean, 1 cianobacteria y 1 microalga verde fueron utilizados para la producción de biodiesel utilizando dos sistemas de extracción con disolventes (hexano/éter (1:1, v/v y (Cloroformo / metanol (2:1, v/v. La evaluación bioquímica de las especies de algas se llevó a cabo mediante la estimación de los porcentajes de biomasa, de lípidos, de biodiesel y de sedimento (glicerina y pigmentos. El sistema extracción con el disolvente hexano/éter (1:1, v

  7. Peripheral and central localization of the nesfatin-1 receptor using autoradiography in rats

    Energy Technology Data Exchange (ETDEWEB)

    Prinz, Philip [Charité Center for Internal Medicine and Dermatology, Department for Psychosomatic Medicine, Charité-Universitätsmedizin Berlin, Hindenburgdamm 30, 12203 Berlin (Germany); Goebel-Stengel, Miriam [Department of Internal Medicine, Martin-Luther Krankenhaus, Caspar-Theyß-Str. 27-31, 14193 Berlin (Germany); Teuffel, Pauline; Rose, Matthias; Klapp, Burghard F. [Charité Center for Internal Medicine and Dermatology, Department for Psychosomatic Medicine, Charité-Universitätsmedizin Berlin, Hindenburgdamm 30, 12203 Berlin (Germany); Stengel, Andreas, E-mail: andreas.stengel@charite.de [Charité Center for Internal Medicine and Dermatology, Department for Psychosomatic Medicine, Charité-Universitätsmedizin Berlin, Hindenburgdamm 30, 12203 Berlin (Germany)

    2016-02-12

    Nesfatin-1 was recently identified and introduced as food intake-regulatory hormone. Soon thereafter, mounting evidence indicated a much broader role for nesfatin-1 with an involvement in the regulation of food intake, gastrointestinal motility, glucose homeostasis, blood pressure and stress. Despite the growing knowledge on the physiological regulation and functions of nesfatin-1, the receptor mediating these effects remains to be characterized. Therefore, the aim of this study was to investigate the peripheral and central localization of the nesfatin-1 receptor by autoradiography. Male Sprague–Dawley rats were used and peripheral as well as brain tissue was processed for {sup 125}I-nesfatin-1 autoradiography. In peripheral tissues, an autoradiographic signal was observed in the gastric mucosa of corpus and antrum, in duodenum, jejunum and ileum, while no signal was detected in the colon. Preabsorption of {sup 125}I-nesfatin-1 with non-labeled nesfatin-1 greatly diminished the autoradiographic signal in the stomach indicating specificity (−32%, p < 0.001). A displacement assay showed an effective concentration by which 50% of {sup 125}I-nesfatin-1 bound to the receptor (EC{sub 50}) in the gastric corpus of 80 pM. Moreover, autoradiography was observed in endocrine tissues including the pituitary, pancreas, adrenal gland, testis and visceral adipose tissue. In addition, also heart, skeletal muscle, lung, liver and kidney showed autoradiographic signals. In the brain, strong {sup 125}I-nesfatin-1 autoradiography was detected in the cortex, paraventricular nucleus of the hypothalamus, area postrema, dorsal motor nucleus of the vagus nerve and cerebellum. Based on the distribution of nesfatin-1 autoradiography, nesfatin-1 is a pleiotropic hormone that is involved in the regulation of several homeostatic functions. - Highlights: • Although our knowledge on nesfatin-1 is increasing, the receptor is still unknown. • {sup 125}I-nesfatin-1 autoradiography was

  8. Binding Studies of Lamotrigine with Sera of Different Animal Species

    African Journals Online (AJOL)

    Erah

    into the mechanism of interaction, evaluate the effect of dielectric constant on binding affinity, and to determine the effect of ..... Physico-chemical aspects of protein binding of nimesulide, Ind J. Pharm Sci, 2005; 2: 243-246. 10. Dutta, SK, Basu, SK, Sen KK. Binding of diclofenac sodium with bovine serum albumin at different ...

  9. Analysis of genetic variation in different banana ( Musa species ...

    African Journals Online (AJOL)

    The banana (Musa acuminata Colla) is considered as an important crop plant due to its high economic value as good dietary source. Here, we analyze the genetic relationship of four different banana varieties that are cultivated in south India. Random amplified polymorphic DNAs (RAPDs) fingerprinting of these banana ...

  10. Coexistence of three different Drosophila species by rescheduling ...

    Indian Academy of Sciences (India)

    Unknown

    were collected randomly and allowed to feed on a gener- ous smear of live ... The feeding rate of larvae at 25°C was considered only for this study. The feeding rate of larvae, grown at 20°C, could not be per- formed as most of larvae remain sitting and even after an ..... different life history strategies – the fast developers die.

  11. Incidence of orthopteran species (Insecta: Orthoptera among different sampling sites within Satoyama area, Japan

    Directory of Open Access Journals (Sweden)

    S. Abu ElEla

    2012-03-01

    Full Text Available In a survey of the orthopteran assemblages in four different sampling sites in Satoyama area, fifty different species have been recorded. These species belong to 10 families, 17 subfamilies and 27 tribes. Family Acrididae was found to exhibit the highest number of subfamilies and tribes (four subfamilies and eight tribes. This was followed by Tettigoniida with six tribes. However, both of Gryllidae and Tettigoniida harbored the highest number of observed species (12 species. On the other hand, three families were considered comparatively poor families exhibiting a single subfamily, a single tribe and a single species. These families were Eneopteridae, Mecopodidae and Pyrgomorphidae.

  12. Orthopoxvirus species and strain differences in cell entry

    Energy Technology Data Exchange (ETDEWEB)

    Bengali, Zain; Satheshkumar, P.S. [Laboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892-3210 (United States); Moss, Bernard, E-mail: bmoss@nih.gov [Laboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892-3210 (United States)

    2012-11-25

    Vaccinia virus (VACV) enters cells by a low pH endosomal route or by direct fusion with the plasma membrane. We previously found differences in entry properties of several VACV strains: entry of WR was enhanced by low pH, reduced by bafilomycin A1 and relatively unaffected by heparin, whereas entry of IHD-J, Copenhagen and Elstree were oppositely affected. Since binding and entry modes may have been selected by specific conditions of in vitro propagation, we now examined the properties of three distinct, recently isolated cowpox viruses and a monkeypox virus as well as additional VACV and cowpox virus strains. The recent isolates were more similar to WR than to other VACV strains, underscoring the biological importance of endosomal entry by orthopoxviruses. Sequence comparisons, gene deletions and gene swapping experiments indicated that viral determinants, other than or in addition to the A26 and A25 'fusion-suppressor' proteins, impact entry properties.

  13. Quantitative carbon-14 autoradiography at the cellular level: principles and application for cell kinetic studies

    International Nuclear Information System (INIS)

    Doermer, P.

    1981-01-01

    Amounts of radio-labelled substances as low as 10 -18 moles incorporated into individual cells can be measured by utilizing techniques of quantitative autoradiography. The principles and application of quantitative carbon-14 autoradiography are reviewed. Silver grain densities can be counted by automated microphotometry allowing on-line data processing by an interfaced computer. Rate measurements of 14 C-thymidine incorporation into individual cells yield values of the DNA synthesis rate and the DNA synthesis time of a cell compartment can be derived. This is an essential time parameter for the evaluation of kinetic events in proliferating cell populations. This method is applicable to human cells without radiation hazard to man and provides an optimal source of detailed information on the kinetics of normal and diseased human haematopoiesis. Examples of application consist of thalassaemia, malaria infection, iron deficiency anaemia and acute myelogenous leukaemia. (author)

  14. Neutron autoradiography: working-out method and application in investigations of test paintings

    International Nuclear Information System (INIS)

    Kalicki, A.; Panczyk, E.; Rowinska, L.; Sartowska, B.; Walis, L.; Pytel, K.; Pytel, B.; Koziel, A.; Dabkowski, L.; Wierzchnicka, M.; Strzalkowski, L.; Ostrowski, T.

    2001-01-01

    Neutron-induced autoradiography was carried out at MARIA research reactor in Poland. The paintings were exposed to the thermal neutrons. As a result, the radionuclides emitting beta particles and gamma rays were created from some of the elements existing in the painting. Beta particles were detected during successive exposure to a series of X-ray medical-sensitive films. The obtained images--blackening of the films depends mainly on the nuclear characteristic of recorded radionuclides and exposure parameters. The main purpose of this work was to work out a method, build a special stand and test sample paintings using neutron autoradiography. Samples of paintings were investigated and according to the obtained results, optimum test parameters have been selected: neutron irradiation conditions and autoradiographs exposure conditions

  15. Coating sections for electron microscopic autoradiography: a stripping technique using liquid emulsion

    International Nuclear Information System (INIS)

    Burry, R.W.; Lasher, R.S.

    1975-01-01

    A coating technique for electron microscope autoradiography is described which combines the advantage of forming an emulsion film by a dripping method with the ease of coating sections already on grids. Sections are coated so that a formvar support film separates the section and the emulsion crystals. This intermediate layer of formvar ensures a random distribution of the emulsion crystals. Using light gold sections, Ilford L-4 emulsion and Microdol-X development, the resolution of this technique, as determined by the half distance method, was 150 nm. The additional layer of formvar slightly reduced the image quality with biological samples in the electron microscope. This technique has a minimal loss of resolution and image quality for moderate resolution electron microscope autoradiography. (author)

  16. Localization of 125I-insulin binding sites in the rat hypothalamus by quantitative autoradiography

    International Nuclear Information System (INIS)

    Corp, E.S.; Woods, S.C.; Figlewicz, D.P.; Porte, D. Jr.; Baskin, D.G.; Dorsa, D.M.

    1986-01-01

    In vitro autoradiography and computer video densitometry were used to localize and quantify binding of 125 I-insulin in the hypothalamus of the rat brain. Highest specific binding was found in the arculate, dorsomedial, suprachiasmatic, paraventricular and periventricular regions. Significantly lower binding was present in the ventromedial nucleus and median eminence. The results are consistent with the hypothesis that insulin modulates the neural regulation of feeding by acting at sites in the hypothalamus. (author)

  17. Size and number of DNA molecules from Chinese hamster ovary cells determined by molecular autoradiography

    International Nuclear Information System (INIS)

    Todd, M.B.

    1980-06-01

    A new method for visualization of separable subunits of DNA is described. Autoradiography of tritium-labeled DNA from one or a few nuclei, lysed with detergent, moderate salt, and proteases, and gently deposited on a filter, allows determination of subunit molecular weight, size distribution, number per nucleus, and organization. The shape of the size distribution of CHO subunit images is similar to that of CHO mitotic chromosomes, and the numbers of subunits per nucleus supports a model of eight subunits per chromosome

  18. Morphological Differences between Larvae of the Ciona intestinalis Species Complex: Hints for a Valid Taxonomic Definition of Distinct Species.

    Directory of Open Access Journals (Sweden)

    Roberta Pennati

    Full Text Available The cosmopolitan ascidian Ciona intestinalis is the most common model species of Tunicata, the sister-group of Vertebrata, and widely used in developmental biology, genomics and evolutionary studies. Recently, molecular studies suggested the presence of cryptic species hidden within the C. intestinalis species, namely C. intestinalis type A and type B. So far, no substantial morphological differences have been identified between individuals belonging to the two types. Here we present morphometric, immunohistochemical, and histological analyses, as well as 3-D reconstructions, of late larvae obtained by cross-fertilization experiments of molecularly determined type A and type B adults, sampled in different seasons and in four different localities. Our data point to quantitative and qualitative differences in the trunk shape of larvae belonging to the two types. In particular, type B larvae exhibit a longer pre-oral lobe, longer and relatively narrower total body length, and a shorter ocellus-tail distance than type A larvae. All these differences were found to be statistically significant in a Discriminant Analysis. Depending on the number of analyzed parameters, the obtained discriminant function was able to correctly classify > 93% of the larvae, with the remaining misclassified larvae attributable to the existence of intra-type seasonal variability. No larval differences were observed at the level of histology and immunohistochemical localization of peripheral sensory neurons. We conclude that type A and type B are two distinct species that can be distinguished on the basis of larval morphology and molecular data. Since the identified larval differences appear to be valid diagnostic characters, we suggest to raise both types to the rank of species and to assign them distinct names.

  19. Two Orangutan Species Have Evolved DifferentKIRAlleles and Haplotypes.

    Science.gov (United States)

    Guethlein, Lisbeth A; Norman, Paul J; Heijmans, Corinne M C; de Groot, Natasja G; Hilton, Hugo G; Babrzadeh, Farbod; Abi-Rached, Laurent; Bontrop, Ronald E; Parham, Peter

    2017-04-15

    The immune and reproductive functions of human NK cells are regulated by interactions of the C1 and C2 epitopes of HLA-C with C1-specific and C2-specific lineage III killer cell Ig-like receptors (KIR). This rapidly evolving and diverse system of ligands and receptors is restricted to humans and great apes. In this context, the orangutan has particular relevance because it represents an evolutionary intermediate, one having the C1 epitope and corresponding KIR but lacking the C2 epitope. Through a combination of direct sequencing, KIR genotyping, and data mining from the Great Ape Genome Project, we characterized the KIR alleles and haplotypes for panels of 10 Bornean orangutans and 19 Sumatran orangutans. The orangutan KIR haplotypes have between 5 and 10 KIR genes. The seven orangutan lineage III KIR genes all locate to the centromeric region of the KIR locus, whereas their human counterparts also populate the telomeric region. One lineage III KIR gene is Bornean specific, one is Sumatran specific, and five are shared. Of 12 KIR gene-content haplotypes, 5 are Bornean specific, 5 are Sumatran specific, and 2 are shared. The haplotypes have different combinations of genes encoding activating and inhibitory C1 receptors that can be of higher or lower affinity. All haplotypes encode an inhibitory C1 receptor, but only some haplotypes encode an activating C1 receptor. Of 130 KIR alleles, 55 are Bornean specific, 65 are Sumatran specific, and 10 are shared. Copyright © 2017 by The American Association of Immunologists, Inc.

  20. High speed quantitative digital beta autoradiography using a multi-step avalanche detector and an Apple-II microcomputer

    International Nuclear Information System (INIS)

    Bateman, J.E.; Connolly, J.F.; Stephenson, R.

    1985-04-01

    The development of an electronic, digital beta autoradiography system is described. Using a Multi-Step Avalanche/Multi-Wire Proportional Counter (MSA/MWPC) detector system fitted with delay line readout, high speed digital imaging is demonstrated with sub-millimeter spatial resolution. Good proportionality of observed counting rate relative to the known tritium activity is demonstrated. The application of the system to autoradiography in immunoelectrophoresis, histopathology and DNA sequencing is described. (author)

  1. 64Cu-ATSM and 18FDG PET uptake and 64Cu-ATSM autoradiography in spontaneous canine tumors

    DEFF Research Database (Denmark)

    Hansen, Anders Elias; Kristensen, Annemarie Thuri; Jørgensen, Jesper Tranekjær

    2012-01-01

    The aim of this study was to compare (64)Cu-diacetyl-bis(N(4)-methylsemicarbazone) ((64)Cu-ATSM) and (18)FDG PET uptake characteristics and (64)Cu-ATSM autoradiography to pimonidazole immunohistochemistry in spontaneous canine sarcomas and carcinomas.......The aim of this study was to compare (64)Cu-diacetyl-bis(N(4)-methylsemicarbazone) ((64)Cu-ATSM) and (18)FDG PET uptake characteristics and (64)Cu-ATSM autoradiography to pimonidazole immunohistochemistry in spontaneous canine sarcomas and carcinomas....

  2. Assessment of Quantum Dot Penetration into Skin in Different Species Under Different Mechanical Actions

    Science.gov (United States)

    Monteiro-Riviere, N. A.; Zhang, L. W.

    Skin penetration is one of the major routes of exposure for nanoparticles to gain access to a biological system. QD nanoparticles have received a great deal of attention due to their fluorescent characteristics and potential use in medical applications. However, little is known about their permeability in skin. This study focuses on three types of quantum dots (QD) with different surface coatings and concentrations on their ability to penetrate skin. QD621 (polyethylene glycol coated, PEG) was studied for 24 h in porcine skin flow-through diffusion cells. QD565 and QD655 coated with carboxylic acid were studied for 8 and 24 h in flow-through diffusion cells with flexed, tape stripped and abraded rat skin to determine if these mechanical actions could perturb the barrier and affect penetration. Confocal microscopy depicted QD621 penetration through the uppermost layers of the stratum corneum (SC) and fluorescence was found in the SC and near hair follicles. QD621 were found in the intercellular lipid layers of the SC by transmission electron microscopy (TEM). QD565 and 655 with flexed and tape-stripped skin did not show penetration; only abraded skin showed penetration in the viable dermal layers. In all QD studies, inductively coupled plasma-optical emission spectroscopy (ICP-OES) analysis for cadmium (Cd) and fluorescence for QD did not detect Cd or fluorescence signal in the perfusate at any time point, concentration or type of QD. These results indicate that porcine skin penetration of QD621 is minimal and limited primarily to the outer SC layers, while QD565 and 655 penetrated into the dermis of abraded skin. The anatomical complexity of skin and species differences should be taken into consideration when selecting an animal model to study nanoparticle absorption/penetration. These findings are of importance to risk assessment for nanoscale materials because it indicates that if skin barrier is altered such as in wounds, scrapes, or dermatitis conditions could

  3. Fundamental study on brain receptor mapping by neuronuclear medicine imaging. Quantitation of receptor autoradiography in the rat brain

    Energy Technology Data Exchange (ETDEWEB)

    Tsuji, Shiro

    1988-04-01

    The usefulness of autoradiography in the quantitation of the rat brain receptor was evaluated. H-3 spiperone, H-3 quinuclidinyl benzylate (QNB), H-3 muscimol, H-3 diprenorphine, H-3 ketanserin, and H-3 dihydroalprenolol hydrochloride were used for autoradiography. Satisfactory autoradiograms with these H-3 labeled ligants were obtained for incubation time, washing time, and binding curve. The video digitizer system was the most suitable in autoradiography. Using appropriate conditions for the ligand-receptor interaction, receptor autoradiography and in vitro receptor assay were concordant as for the the number of maximum binding sites (Bmax) of the muscarinic acetylcholine receptor and equilibrium dissociation constant (Kd) of its antagonist, H-3 QNB. Receptor autoradiography with high spatial resolution allowed the comparison of Bmax and Kd in the brain. To improve conventional Scatchard analysis, used in the estimation of Bmax and Kd, a new mathematical method was developed for estimating individual rate constants and Bmax on the basis of time courses of association and dissociation. Using the new mathematical method, apparent equilibrium dissociation rate constant was in good agreement with that from a non-isomerization model. Autoradiography may provide a clue for the basic data on brain receptor mapping by a promising emission computerized tomography in neuropsychiatric diseases. (Namekawa, K.).

  4. [Study on TLC identification of Dida commonly used in Tibetan medicine from different species].

    Science.gov (United States)

    Yang, Yong; Zhong, Guo-Yue; Wu, Xiao-Yun; Luo, Wei-Zao; Gu, Dan-Dan

    2013-03-01

    To establish a method of TLC identification for Dida commonly used in Tibetan medicine from different species. With silica gel G as the stationary phase, and chloroform-methanol (40: 1) as mobile phase, oleanolic acid from different species of Dida was separated and identified. Oleanolic acid was detected in 70 kinds of Dida derived from the Gentianaceae Swertia, Halenia, Gentianopsis, Lomatogonium, and Saxifragaceae saxifrage, except for the saxifrage, there are some differences among different genera or subjection. This TLC method can be used for identification of oleanolic acid in Dida from different species except saxifrage.

  5. Phenotypic plasticity in photosynthetic temperature acclimation among crop species with different cold tolerances.

    Science.gov (United States)

    Yamori, Wataru; Noguchi, Ko; Hikosaka, Kouki; Terashima, Ichiro

    2010-01-01

    While interspecific variation in the temperature response of photosynthesis is well documented, the underlying physiological mechanisms remain unknown. Moreover, mechanisms related to species-dependent differences in photosynthetic temperature acclimation are unclear. We compared photosynthetic temperature acclimation in 11 crop species differing in their cold tolerance, which were grown at 15 degrees C or 30 degrees C. Cold-tolerant species exhibited a large decrease in optimum temperature for the photosynthetic rate at 360 microL L(-1) CO(2) concentration [Opt (A(360))] when growth temperature decreased from 30 degrees C to 15 degrees C, whereas cold-sensitive species were less plastic in Opt (A(360)). Analysis using the C(3) photosynthesis model shows that the limiting step of A(360) at the optimum temperature differed between cold-tolerant and cold-sensitive species; ribulose 1,5-bisphosphate carboxylation rate was limiting in cold-tolerant species, while ribulose 1,5-bisphosphate regeneration rate was limiting in cold-sensitive species. Alterations in parameters related to photosynthetic temperature acclimation, including the limiting step of A(360), leaf nitrogen, and Rubisco contents, were more plastic to growth temperature in cold-tolerant species than in cold-sensitive species. These plastic alterations contributed to the noted growth temperature-dependent changes in Opt (A(360)) in cold-tolerant species. Consequently, cold-tolerant species were able to maintain high A(360) at 15 degrees C or 30 degrees C, whereas cold-sensitive species were not. We conclude that differences in the plasticity of photosynthetic parameters with respect to growth temperature were responsible for the noted interspecific differences in photosynthetic temperature acclimation between cold-tolerant and cold-sensitive species.

  6. The contrasting nature of woody plant species in different neotropical forest biomes reflects differences in ecological stability.

    Science.gov (United States)

    Pennington, R Toby; Lavin, Matt

    2016-04-01

    A fundamental premise of this review is that distinctive phylogenetic and biogeographic patterns in clades endemic to different major biomes illuminate the evolutionary process. In seasonally dry tropical forests (SDTFs), phylogenies are geographically structured and multiple individuals representing single species coalesce. This pattern of monophyletic species, coupled with their old species stem ages, is indicative of maintenance of small effective population sizes over evolutionary timescales, which suggests that SDTF is difficult to immigrate into because of persistent resident lineages adapted to a stable, seasonally dry ecology. By contrast, lack of coalescence in conspecific accessions of abundant and often widespread species is more frequent in rain forests and is likely to reflect large effective population sizes maintained over huge areas by effective seed and pollen flow. Species nonmonophyly, young species stem ages and lack of geographical structure in rain forest phylogenies may reflect more widespread disturbance by drought and landscape evolution causing resident mortality that opens up greater opportunities for immigration and speciation. We recommend full species sampling and inclusion of multiple accessions representing individual species in phylogenies to highlight nonmonophyletic species, which we predict will be frequent in rain forest and savanna, and which represent excellent case studies of incipient speciation. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  7. Receptor autoradiography in the hippocampus of man and rat

    International Nuclear Information System (INIS)

    Zilles, K.

    1988-01-01

    This chapter deals with the following questions: regional distribution of binding sites for 5-HT, glutamate, and acetylcholine in Ammon's horn and the dentate gyrus of rat and human brain; comparison of receptor distribution and neuronal pathways with identified transmitters; correlation of region-specific densities between different receptors and receptor subtypes (colocalization of different receptors on the level of hippocampal layers) and comparison of receptor distribution in human and rat hippocampus

  8. Classification and Identification of Plant Fibrous Material with Different Species Using near Infrared Technique-A New Way to Approach Determining Biomass Properties Accurately within Different Species.

    Science.gov (United States)

    Jiang, Wei; Zhou, Chengfeng; Han, Guangting; Via, Brian; Swain, Tammy; Fan, Zhaofei; Liu, Shaoyang

    2016-01-01

    Plant fibrous material is a good resource in textile and other industries. Normally, several kinds of plant fibrous materials used in one process are needed to be identified and characterized in advance. It is easy to identify them when they are in raw condition. However, most of the materials are semi products which are ground, rotted or pre-hydrolyzed. To classify these samples which include different species with high accuracy is a big challenge. In this research, both qualitative and quantitative analysis methods were chosen to classify six different species of samples, including softwood, hardwood, bast, and aquatic plant. Soft Independent Modeling of Class Analogy (SIMCA) and partial least squares (PLS) were used. The algorithm to classify different species of samples using PLS was created independently in this research. Results found that the six species can be successfully classified using SIMCA and PLS methods, and these two methods show similar results. The identification rates of kenaf, ramie and pine are 100%, and the identification rates of lotus, eucalyptus and tallow are higher than 94%. It is also found that spectra loadings can help pick up best wavenumber ranges for constructing the NIR model. Inter material distance can show how close between two species. Scores graph is helpful to choose the principal components numbers during the model construction.

  9. Different pitcher shapes and trapping syndromes explain resource partitioning in Nepenthes species.

    Science.gov (United States)

    Gaume, Laurence; Bazile, Vincent; Huguin, Maïlis; Bonhomme, Vincent

    2016-03-01

    Nepenthes pitcher plants display interspecific diversity in pitcher form and diets. This species-rich genus might be a conspicuous candidate for an adaptive radiation. However, the pitcher traits of different species have never been quantified in a comparative study, nor have their possible adaptations to the resources they exploit been tested. In this study, we compare the pitcher features and prey composition of the seven Nepenthes taxa that grow in the heath forest of Brunei (Borneo) and investigate whether these species display different trapping syndromes that target different prey. The Nepenthes species are shown to display species-specific combinations of pitcher shapes, volumes, rewards, attraction and capture traits, and different degrees of ontogenetic pitcher dimorphism. The prey spectra also differ among plant species and between ontogenetic morphotypes in their combinations of ants, flying insects, termites, and noninsect guilds. According to a discriminant analysis, the Nepenthes species collected at the same site differ significantly in prey abundance and composition at the level of order, showing niche segregation but with varying degrees of niche overlap according to pairwise species comparisons. Weakly carnivorous species are first characterized by an absence of attractive traits. Generalist carnivorous species have a sweet odor, a wide pitcher aperture, and an acidic pitcher fluid. Guild specializations are explained by different combinations of morpho-functional traits. Ant captures increase with extrafloral nectar, fluid acidity, and slippery waxy walls. Termite captures increase with narrowness of pitchers, presence of a rim of edible trichomes, and symbiotic association with ants. The abundance of flying insects is primarily correlated with pitcher conicity, pitcher aperture diameter, and odor presence. Such species-specific syndromes favoring resource partitioning may result from local character displacement by competition and/or previous

  10. Inter- and intra-specific differences in serum proteins of different species and subspecies of zebras.

    Science.gov (United States)

    Stratil, A; Cízová, D; Gábrisová, E; Pokorný, R

    1992-11-01

    1. Serum proteins of Equus grevyi, E. zebra hartmannae, E. burchelli boehmi, E. b. chapmanni and E. b. antiquorum were studied using starch-gel electrophoresis, 1-D polyacrylamide-gel electrophoresis, inhibitions of trypsin and chymotrypsin, immunoblotting, and specific staining for esterase. 2. Clear species-specific patterns were observed in albumin, transferrin, and for E. grevyi in protease inhibitor-1. Specific esterase was detected only in E. z. hartmannae. 3. Protein polymorphism was found in all studied species: E. grevyi--transferrin; E. z. hartmannae--protease inhibitor-1; E. b. boehmi--albumin, GC, transferrin, protease inhibitor-1, protease inhibitor-T; E. b. chapmanni--albumin, GC, transferrin, protease inhibitor-1; E. b. antiquorum--GC, transferrin, protease inhibitor-1. 4. Phenotype patterns of the polymorphic proteins were indicative of simple codominant inheritance. Further studies of polymorphism of protease inhibitor-2 and variability of protease inhibitor-X are needed. 5. alpha 1B glycoprotein in all zebra species was monomorphic. 6. The main transferrin components and alpha 1B glycoprotein of zebra (E. b. boehmi) were characterized for terminal sialic acid content.

  11. Species differences in the regulation of tyrosine hydroxylase in Cnemidophorus whiptail lizards.

    Science.gov (United States)

    Woolley, Sarah C; Crews, David

    2004-09-05

    Evolution of behavioral phenotype involves changes in the underlying neural substrates. Cnemidophorus whiptail lizards enable the study of behavioral and neural evolution because ancestral species involved in producing unisexual, hybrid species still exist. Catecholaminergic systems modulate the expression of social behaviors in a number of vertebrates, including whiptails, and therefore we investigated how changes in catecholamine production correlated with evolutionary changes in behavioral phenotype by measuring the size and number of catecholamine producing (tyrosine hydroxylase-immunoreactive, or TH-ir) cells across the reproductive cycle in females from two related whiptail species. Cnemidophorusuniparens is a triploid, parthenogenetic species that arose from hybridization events involving the diploid, sexual species C. inornatus. Prior to ovulation, females from both species display femalelike receptive behaviors. However, after ovulation, only parthenogenetic individuals display malelike mounting behavior. In all nuclei measured, we found larger TH-ir cells in the parthenogen, a difference consistent with species differences in ploidy. In contrast, species differences in the number of TH-ir cells were nucleus specific. In the preoptic area and anterior hypothalamus, parthenogens had fewer TH-ir cells than females of the sexual species. Reproductive state only affected TH-ir cell number in the substantia nigra pars compacta (SNpc), and C. uniparens individuals had more TH-ir cells after ovulation than when previtellogenic. Thus, species differences over the reproductive cycle in the SNpc are correlated with species differences in behavior, and it appears that the process of speciation may have produced a novel neural and behavioral phenotype in the parthenogen.

  12. Functional differences between native and alien species: a global-scale comparison

    DEFF Research Database (Denmark)

    Ordonez Gloria, Alejandro

    2010-01-01

    1. A prevalent question in the study of plant invasions has been whether or not invasions can be explained on the basis of traits. Despite many attempts, a synthetic view of multi-trait differences between alien and native species is not yet available.2. We compiled a database of three ecologically...... important traits (specific leaf area, typical maximum canopy height, individual seed mass) for 4473 species sampled over 95 communities (3784 species measured in their native range, 689 species in their introduced range, 207 in both ranges).3. Considering each trait separately, co-occurring native and alien...... species significantly differed in their traits. These differences, although modest, were expressed in a combined 15% higher specific leaf area, 16% lower canopy height and 26% smaller seeds.4. Using three novel multi-trait metrics of functional diversity, aliens showed significantly smaller trait ranges...

  13. Calcium weathering in forested soils and the effedt of different tree species

    NARCIS (Netherlands)

    Dijkstra, F.A.; Breemen, van N.; Jongmans, A.G.; Davies, G.R.; Likens, G.E.

    2003-01-01

    Soil weathering can be an important mechanism to neutralize acidity in forest soils. Tree species may differ in their effect on or response to soil weathering. We used soil mineral data and the natural strontium isotope ratio Sr-87/Sr-86 as a tracer to identify the effect of tree species on the Ca

  14. Correlation of [18F]FMISO autoradiography and pimonidazole [corrected] immunohistochemistry in human head and neck carcinoma xenografts.

    Science.gov (United States)

    Troost, Esther G C; Laverman, Peter; Philippens, Mariëlle E P; Lok, Jasper; van der Kogel, Albert J; Oyen, Wim J G; Boerman, Otto C; Kaanders, Johannes H A M; Bussink, Johan

    2008-10-01

    Tumour cell hypoxia is a common feature in solid tumours adversely affecting radiosensitivity and chemosensitivity in head and neck squamous cell carcinomas. Positron emission tomography (PET) using the tracer [(18)F]fluoromisonidazole ([(18)F]FMISO) is most frequently used for non-invasive evaluation of hypoxia in human tumours. A series of ten human head and neck xenograft tumour lines was used to validate [(18)F]FMISO as hypoxia marker at the microregional level. Autoradiography after injection of [(18)F]FMISO was compared with immunohistochemical staining for the hypoxic cell marker pimonidazole in the same tumour sections of ten different human head and neck xenograft tumour lines. The methods were compared: first, qualitatively considering the microarchitecture; second, by obtaining a pixel-by-pixel correlation of both markers at the microregional level; third, by measuring the signal intensity of both images; and fourth, by calculating the hypoxic fractions by pimonidazole labelling. The pattern of [(18)F]FMISO signal was dependent on the distribution of hypoxia at the microregional level. The comparison of [(18)F]FMISO autoradiography and pimonidazole immunohistochemistry by pixel-by-pixel analysis revealed moderate correlations. In five tumour lines, a significant correlation between the mean [(18)F]FMISO and pimonidazole signal intensity was found (range, r(2)=0.91 to r(2)=0.99). Comparison of the tumour lines with respect to the microregional distribution pattern of hypoxia revealed that the correlation between the mean signal intensities strongly depended on the microarchitecture. Overall, a weak but significant correlation between hypoxic fractions based on pimonidazole labeling and the mean [(18)F]FMISO signal intensity was observed (r(2)=0.18, p=0.02). For the three tumour models with a ribbon-like microregional distribution pattern of hypoxia, the correlation between the hypoxic fraction and the mean [(18)F]FMISO signal intensity was much stronger

  15. Diurnal and seasonal carbon balance of four tropical tree species differing in successional status.

    Science.gov (United States)

    Souza, G M; Ribeiro, R V; Sato, A M; Oliveira, M S

    2008-11-01

    This study addressed some questions about how a suitable leaf carbon balance can be attained for different functional groups of tropical tree species under contrasting forest light environments. The study was carried out in a fragment of semi-deciduous seasonal forest in Narandiba county, São Paulo Estate, Brazil. 10-month-old seedlings of four tropical tree species, Bauhinia forficata Link (Caesalpinioideae) and Guazuma ulmifolia Lam. (Sterculiaceae) as light-demanding pioneer species, and Hymenaea courbaril L. (Caesalpinioideae) and Esenbeckia leiocarpa Engl. (Rutaceae) as late successional species, were grown under gap and understorey conditions. Diurnal courses of net photosynthesis (Pn) and transpiration were recorded with an open system portable infrared gas analyzer in two different seasons. Dark respiration and photorespiration were also evaluated in the same leaves used for Pn measurements after dark adaptation. Our results showed that diurnal-integrated dark respiration (Rdi) of late successional species were similar to pioneer species. On the other hand, photorespiration rates were often higher in pioneer than in late successional species in the gap. However, the relative contribution of these parameters to leaf carbon balance was similar in all species in both environmental conditions. Considering diurnal-integrated values, gross photosynthesis (Pgi) was dramatically higher in gap than in understorey, regardless of species. In both evaluated months, there were no differences among species of different functional groups under shade conditions. The same was observed in May (dry season) under gap conditions. In such light environment, pioneers were distinguished from late successional species in November (wet season), showing that ecophysiological performance can have a straightforward relation to seasonality.

  16. Diurnal and seasonal carbon balance of four tropical tree species differing in successional status

    Directory of Open Access Journals (Sweden)

    GM. Souza

    Full Text Available This study addressed some questions about how a suitable leaf carbon balance can be attained for different functional groups of tropical tree species under contrasting forest light environments. The study was carried out in a fragment of semi-deciduous seasonal forest in Narandiba county, São Paulo Estate, Brazil. 10-month-old seedlings of four tropical tree species, Bauhinia forficata Link (Caesalpinioideae and Guazuma ulmifolia Lam. (Sterculiaceae as light-demanding pioneer species, and Hymenaea courbaril L. (Caesalpinioideae and Esenbeckia leiocarpa Engl. (Rutaceae as late successional species, were grown under gap and understorey conditions. Diurnal courses of net photosynthesis (Pn and transpiration were recorded with an open system portable infrared gas analyzer in two different seasons. Dark respiration and photorespiration were also evaluated in the same leaves used for Pn measurements after dark adaptation. Our results showed that diurnal-integrated dark respiration (Rdi of late successional species were similar to pioneer species. On the other hand, photorespiration rates were often higher in pioneer than in late successional species in the gap. However, the relative contribution of these parameters to leaf carbon balance was similar in all species in both environmental conditions. Considering diurnal-integrated values, gross photosynthesis (Pgi was dramatically higher in gap than in understorey, regardless of species. In both evaluated months, there were no differences among species of different functional groups under shade conditions. The same was observed in May (dry season under gap conditions. In such light environment, pioneers were distinguished from late successional species in November (wet season, showing that ecophysiological performance can have a straightforward relation to seasonality.

  17. Arbuscular mycorrhizal fungi reduce the differences in competitiveness between dominant and subordinate plant species.

    Science.gov (United States)

    Mariotte, Pierre; Meugnier, Claire; Johnson, David; Thébault, Aurélie; Spiegelberger, Thomas; Buttler, Alexandre

    2013-05-01

    In grassland communities, plants can be classified as dominants or subordinates according to their relative abundances, but the factors controlling such distributions remain unclear. Here, we test whether the presence of the arbuscular mycorrhizal (AM) fungus Glomus intraradices affects the competitiveness of two dominant (Taraxacum officinale and Agrostis capillaris) and two subordinate species (Prunella vulgaris and Achillea millefolium). Plants were grown in pots in the presence or absence of the fungus, in monoculture and in mixtures of both species groups with two and four species. In the absence of G. intraradices, dominants were clearly more competitive than subordinates. In inoculated pots, the fungus acted towards the parasitic end of the mutualism-parasitism continuum and had an overall negative effect on the growth of the plant species. However, the negative effects of the AM fungus were more pronounced on dominant species reducing the differences in competitiveness between dominant and subordinate species. The effects of G. intraradices varied with species composition highlighting the importance of plant community to mediate the effects of AM fungi. Dominant species were negatively affected from the AM fungus in mixtures, while subordinates grew identically with and without the fungus. Therefore, our findings predict that the plant dominance hierarchy may flatten out when dominant species are more reduced than subordinate species in an unfavourable AM fungal relationship (parasitism).

  18. Investigation of silicon dioxide films by neutron activation analysis and autoradiography

    International Nuclear Information System (INIS)

    Rausch, H.

    1978-01-01

    Activation analysis and surface autoradiography were used to determine the concentration distribution and precipitation of contaminants in the internal part of the films and on the surfaces. The origin of the contaminants was studied by sampling each technological product following oxidation doped oxide deposition, heating and metallizing. Samples were irradiated at a thermal neutron flux of 3.2 . 10 13 n . cm -2 . s -1 . Irradiation times of 30 hrs and cooling times of about 24 hrs were used. After irradiation, samples were treated by 3N hydrochloric acid at 60 deg C to remove the surface contamination. The removal of the successive regions of the oxide films was carried out by chemical etching, using an NH 4 F-HF-H 2 O solution (90 cm 3 conc. HF, 300 g NH 4 F, 600 cm 3 H 2 O, NH 4 OH to ph=4.5), which has an etching rate of 200 A/min at 0 deg C. By this technique picein coating is used to protect parts other than the analyzed oxide film. For NAA measurements, slices were etched in 25 ml polyethene beakers containing 10 cm 3 of solution in which the etchant was to be gamma-counted. For the autoradiography, Kodak AR 10 Striping film and ORWO RD 3-4 dosimeter film were used. The exposure times varied in the range of 24-72 hrs according to the activity of the samples. The distribution of the density of the autoradiography was determined by microdensitometry. Under the given conditions, the following detection limits of impurities could be obtained in silicon dioxide films: Na=80 ppb, Cu=20 ppb and Au=5 ppb. (T.G.)

  19. Quantifying inter-species differences in contractile function through biophysical modelling.

    Science.gov (United States)

    Tøndel, Kristin; Land, Sander; Niederer, Steven A; Smith, Nicolas P

    2015-03-01

    Animal models and measurements are frequently used to guide and evaluate clinical interventions. In this context, knowledge of inter-species differences in physiology is crucial for understanding the limitations and relevance of animal experimental assays for informing clinical applications. Extensive effort has been put into studying the structure and function of cardiac contractile proteins and how differences in these translate into the functional properties of muscles. However, integrating this knowledge into a quantitative description, formalising and highlighting inter-species differences both in the kinetics and in the regulation of physiological mechanisms, remains challenging. In this study we propose and apply a novel approach for the quantification of inter-species differences between mouse, rat and human. Assuming conservation of the fundamental physiological mechanisms underpinning contraction, biophysically based computational models are fitted to simulate experimentally recorded phenotypes from multiple species. The phenotypic differences between species are then succinctly quantified as differences in the biophysical model parameter values. This provides the potential of quantitatively establishing the human relevance of both animal-based experimental and computational models for application in a clinical context. Our results indicate that the parameters related to the sensitivity and cooperativity of calcium binding to troponin C and the activation and relaxation rates of tropomyosin/crossbridge binding kinetics differ most significantly between mouse, rat and human, while for example the reference tension, as expected, shows only minor differences between the species. Hence, while confirming expected inter-species differences in calcium sensitivity due to large differences in the observed calcium transients, our results also indicate more unexpected differences in the cooperativity mechanism. Specifically, the decrease in the unbinding rate of

  20. SOME PRELIMINARY DATA ABOUT VESICULAR – ARBUSCULAR MYCORRHIZAS AT DIFFERENT SPECIES OF PLANTAGO

    OpenAIRE

    Nicoleta IANOVICI

    2010-01-01

    Vesicular – arbuscular mycorrhizas are though widely distributed. Root colonization of VAM fungi was studied in seven different species of Plantago. Colonization was high among all species. The highest intensity of root cortex colonization (M%), relative arbuscular richness (A%) and arbuscule richness in root fragments were found in the Plantago schwarzenbergiana. Comparison of the VAM colonization in roots from different ecosystems suggested that plants grown in the saline habitats might be...

  1. Characterization of a double-sided silicon strip detector autoradiography system

    Energy Technology Data Exchange (ETDEWEB)

    Örbom, Anders, E-mail: anders.orbom@med.lu.se; Ahlstedt, Jonas; Östlund, Karl; Strand, Sven-Erik [Department of Medical Radiation Physics, Lund University, Lund SE-22185 (Sweden); Serén, Tom; Auterinen, Iiro; Kotiluoto, Petri [VTT Technical Research Centre of Finland, Espoo FI-02044 (Finland); Hauge, Håvard [Biomolex AS, Oslo NO-0319 (Norway); Olafsen, Tove; Wu, Anna M.; Dahlbom, Magnus [Department of Molecular and Medical Pharmacology, David Geffen School of Medicine at UCLA, Los Angeles, California 90095 (United States)

    2015-02-15

    Purpose: The most commonly used technology currently used for autoradiography is storage phosphor screens, which has many benefits such as a large field of view but lacks particle-counting detection of the time and energy of each detected radionuclide decay. A number of alternative designs, using either solid state or scintillator detectors, have been developed to address these issues. The aim of this study is to characterize the imaging performance of one such instrument, a double-sided silicon strip detector (DSSD) system for digital autoradiography. A novel aspect of this work is that the instrument, in contrast to previous prototype systems using the same detector type, provides the ability for user accessible imaging with higher throughput. Studies were performed to compare its spatial resolution to that of storage phosphor screens and test the implementation of multiradionuclide ex vivo imaging in a mouse preclinical animal study. Methods: Detector background counts were determined by measuring a nonradioactive sample slide for 52 h. Energy spectra and detection efficiency were measured for seven commonly used radionuclides under representative conditions for tissue imaging. System dead time was measured by imaging {sup 18}F samples of at least 5 kBq and studying the changes in count rate over time. A line source of {sup 58}Co was manufactured by irradiating a 10 μm nickel wire with fast neutrons in a research reactor. Samples of this wire were imaged in both the DSSD and storage phosphor screen systems and the full width at half maximum (FWHM) measured for the line profiles. Multiradionuclide imaging was employed in a two animal study to examine the intratumoral distribution of a {sup 125}I-labeled monoclonal antibody and a {sup 131}I-labeled engineered fragment (diabody) injected in the same mouse, both targeting carcinoembryonic antigen. Results: Detector background was 1.81 × 10{sup −6} counts per second per 50 × 50 μm pixel. Energy spectra and

  2. Quantitative autoradiography of semiconductor materials by means of diffused phosphorus standards

    International Nuclear Information System (INIS)

    Treutler, H.C.; Freyer, K.

    1983-01-01

    A suitable standard sample was developed and tested on the basis of phosphorus for the quantitative autoradiography of elements of interest in semiconductor technology. By the aid of silicon disks with a phosphorus concentration of 6x10 17 atomsxcm - 2 the error of the quantitative autoradiogprahic method is determined. The relative mean error of the density measurement is at best +-4%; the relative mean error of the determination of phosphorus concentration by use of an error-free standard sample is about +-15%. The method will be extended to other elements by use of this standard sample of phosphorus. (author)

  3. Quantitative autoradiography of (/sup 125/I) apamin binding sites in the central nervous system

    Energy Technology Data Exchange (ETDEWEB)

    Janicki, P.K.; Horvath, E.; Habermann, E. (Giessen Univ. (Germany, F.R.). Rudolf-Buchheim-Institut fuer Pharmakologie); Seibold, G. (Giessen Univ. (Germany, F.R.). Strahlenzentrum)

    1984-12-01

    The binding sites for (/sup 125/I) apamin in the central nervous system of rat, guinea-pig, chicken and frog were assessed by quantitative autoradiography on X-ray film. In rat and guinea-pig brain apamin labels preferentially the limbic-olfactory system, i.e. nucleus olfactorius, nuclei septi, habenula and hippocampus. In the rat spinal cord the peptide binds preferentially to the substantia gelatinosa. Tectum opticum and nuclei isthmi are labelled in chicken brain. In frog brain no preferentially 'apamin-stained' area was found. The role of the cerebral binding sites is still unknown, whereas the spinal sites may be involved in apamin poisoning.

  4. Variation in thickness of the large cryosections cut for whole-body autoradiography

    International Nuclear Information System (INIS)

    Ito, Tsunao; Brill, A.B.

    1991-01-01

    A method to assess variation in thickness of the large cryosections for whole-body autoradiography (WBARG) was described, and the degree of intraslice and interslice variations were determined for our cryomicrotome system (LKB PMV-2250). Intraslice variation in thickness of the 180 x 80 mm cryosection was 0.72-0.92 μm within the range of section thickness for WBARG (15-50 μm), and interslice variation was 0.89-1.21 μm. These potential variations in section thickness should be kept in mind whenever working with quantitative WBARG. (author)

  5. Neutron-induced autoradiography for determining the boron distribution in plant organs

    International Nuclear Information System (INIS)

    Kluge, R.; Podlesak, W.

    1982-01-01

    As could be shown in preliminary tests with potato leaves, the distribution of boron in plant organs can be displayed qualitatively and determined quantitatively by neutron-induced autoradiography using dielectric track detectors. The detection limit is some ppm B in absolutely dry plant tissue. Semiquantitative interpretation of the autoradiograms by classing track densities with the aid of the image processing instrument 'Densitron' offers favourable possibilities for survey analyses. In this way boron concentration ranges can be determined with the aid of standards and a justifiable effort, so that a sufficiently precise assessment of the boron distribution in plant organs becomes possible. (author)

  6. Circadian rhythms differ between sexes and closely related species of Nasonia wasps.

    Directory of Open Access Journals (Sweden)

    Rinaldo C Bertossa

    Full Text Available Activity rhythms in 24 h light-dark cycles, constant darkness, and constant light conditions were analyzed in four different Nasonia species for each sex separately. Besides similarities, clear differences are evident among and within Nasonia species as well as between sexes. In all species, activity in a light-dark cycle is concentrated in the photophase, typical for diurnal organisms. Contrary to most diurnal insect species so far studied, Nasonia follows Aschoff's rule by displaying long (>24 h internal rhythms in constant darkness but short (<24 h in constant light. In constant light, N. vitripennis males display robust circadian activity rhythms, whereas females are usually arrhythmic. In contrast to other Nasonia species, N. longicornis males display anticipatory activity, i.e. activity shortly before light-on in a light-dark cycle. As expected, N. oneida shows activity patterns similar to those of N. giraulti but with important differences in key circadian parameters. Differences in circadian activity patterns and parameters between species may reflect synchronization of specific life-history traits to environmental conditions. Scheduling mating or dispersion to a specific time of the day could be a strategy to avoid interspecific hybridization in Nasonia species that live in sympatry.

  7. Analyzing the Differences and Preferences of Pathogenic and Nonpathogenic Prokaryote Species

    Science.gov (United States)

    Nolen, L.; Duong, K.; Heim, N. A.; Payne, J.

    2015-12-01

    A limited amount of knowledge exists on the large-scale characteristics and differences of pathogenic species in comparison to all prokaryotes. Pathogenic species, like other prokaryotes, have attributes specific to their environment and lifestyles. However, because they have evolved to coexist inside their hosts, the conditions they occupy may be more limited than those of non-pathogenic species. In this study we investigate the possibility of divergent evolution between pathogenic and non-pathogenic species by examining differences that may have evolved as a result of the need to adapt to their host. For this research we analyzed data collected from over 1900 prokaryotic species and performed t-tests using R to quantify potential differences in preferences. To examine the possible divergences from nonpathogenic bacteria, we focused on three variables: cell biovolume, preferred environmental pH, and preferred environmental temperature. We also looked at differences between pathogenic and nonpathogenic species belonging to the same phylum. Our results suggest a strong divergence in abiotic preferences between the two groups, with pathogens occupying a much smaller range of temperatures and pHs than their non-pathogenic counterparts. However, while the median biovolume is different when comparing pathogens and nonpathogens, we cannot conclude that the mean values are significantly different from each other. In addition, we found evidence of convergent evolution, as the temperature and pH preferences of pathogenic bacteria species from different phlya all approach the same values. Pathogenic species do not, however, all approach the same biovolume values, suggesting that specific pH and temperature preferences are more characteristic of pathogens than certain biovolumes.

  8. What difference does it make if viruses are strain-, rather than species-specific?

    Directory of Open Access Journals (Sweden)

    Tron Frede Thingstad

    2015-04-01

    Full Text Available Theoretical work has suggested an important role of lytic viruses in controlling the diversity of their prokaryotic hosts. Yet, providing strong experimental or observational support (or refutation for this has proven evasive. Such models have usually assumed host groups to correspond to the species level, typically represented by 16S rDNA data. Recent model developments take into account the resolution of species into strains with differences in their susceptibility to viral attack. With strains as the host groups, the models will have explicit viral control of abundance at strain level, combined with explicit predator or resource control at community level, but the direct viral control at species level then disappears. Abundance of a species therefore emerges as the combination of how many strains, and at what abundance, this species can establish in competition with other species from a seeding community. We here discuss how species diversification and strain diversification may introduce competitors and defenders, respectively, and that the balance between the two may be a factor in the control of species diversity in mature natural communities. These models suggest that the balance between the two may be a factor in the control of species diversity in mature natural communities. These models can also give a dominance of individuals from strains with high cost of resistance; suggesting that the high proportion of dormant cells among pelagic heterotrophic prokaryotes may reflect their need for expensive defense rather than the lack of suitable growth substrates in their environment.

  9. Neuromodulating mice and men: Are there functional species differences in neurotransmitter concentration?

    Science.gov (United States)

    Fitzgerald, Paul J

    2009-07-01

    I examine evidence that the concentration of certain modulatory neurotransmitters varies across species, including differences between rodents and primates. Microdialysis studies indicate that the baseline concentration of serotonin, norepinephrine, dopamine, and acetylcholine, as measured in the prefrontal cortex of awake animals, may differ between rats and macaque monkeys. These differences may extend to mice and humans, as well. If there are differences in the tonic concentration of these neurotransmitters, this may affect the functioning of these transmitter systems in multiple ways, including potential effects on neuropsychiatric conditions such as the various mental illnesses and modeling of them in animals. Species differences in transmitter concentration may also have neuropharmacological implications, and may be relevant to the phenomenon of differences in speed of drug response between humans and rodents. This paper is divided into three sections that address related questions about the potential concentration differences: (1) Are there species differences in baseline neurotransmitter concentration? (2) Are the putative differences functional? (3) What might the functional differences be? Consideration of the existing evidence indicates that there may indeed be functional species differences in the modulatory transmitter systems.

  10. Study of Tree and Shrub Species Diversity in Forestry Plans with Different Forest Management

    Directory of Open Access Journals (Sweden)

    nooreddin noorian

    2017-12-01

    Full Text Available The aim of this research was to investigate the diversity of tree and shrub species in forestry plan in a watershed and in almost the same ecological conditions but different in forest management plan in the part of Golestan province forest. To this end, the 6675 hectares of the watershed number of 85 in 5 different plans in series one (30-year forestry plan with University Scientific Management, series two Doctor Bahramnia (without implementation and protection, series four Shamoshak, Naharkhoran plan and Sad Abad plan were selected. Inventory grid was designed by a systematic cluster sampling method with 239 circle plots in the study area. In each sample, species composition and diameter at breast height of trees and shrubs were measured. Species diversity in different series, were performed by calculating the heterogeneity indices, species richness and evenness. Statistical analysis of significant differences between the values of biodiversity of woody species among different series was performed by Duncan’s test. The results showed that biodiversity of woody species in the one and two series of Shastkalateh forest under academic management was better than other plans and forestry plan of Naharkhoran is in an unfavorable situation in terms of diversity indices.

  11. The role of positive selection in determining the molecular cause of species differences in disease

    Directory of Open Access Journals (Sweden)

    Foord Steven M

    2008-10-01

    Full Text Available Abstract Background Related species, such as humans and chimpanzees, often experience the same disease with varying degrees of pathology, as seen in the cases of Alzheimer's disease, or differing symptomatology as in AIDS. Furthermore, certain diseases such as schizophrenia, epithelial cancers and autoimmune disorders are far more frequent in humans than in other species for reasons not associated with lifestyle. Genes that have undergone positive selection during species evolution are indicative of functional adaptations that drive species differences. Thus we investigate whether biomedical disease differences between species can be attributed to positively selected genes. Results We identified genes that putatively underwent positive selection during the evolution of humans and four mammals which are often used to model human diseases (mouse, rat, chimpanzee and dog. We show that genes predicted to have been subject to positive selection pressure during human evolution are implicated in diseases such as epithelial cancers, schizophrenia, autoimmune diseases and Alzheimer's disease, all of which differ in prevalence and symptomatology between humans and their mammalian relatives. In agreement with previous studies, the chimpanzee lineage was found to have more genes under positive selection than any of the other lineages. In addition, we found new evidence to support the hypothesis that genes that have undergone positive selection tend to interact with each other. This is the first such evidence to be detected widely among mammalian genes and may be important in identifying molecular pathways causative of species differences. Conclusion Our dataset of genes predicted to have been subject to positive selection in five species serves as an informative resource that can be consulted prior to selecting appropriate animal models during drug target validation. We conclude that studying the evolution of functional and biomedical disease differences

  12. Different Ultimate Factors Define Timing of Breeding in Two Related Species.

    Directory of Open Access Journals (Sweden)

    Veli-Matti Pakanen

    Full Text Available Correct reproductive timing is crucial for fitness. Breeding phenology even in similar species can differ due to different selective pressures on the timing of reproduction. These selection pressures define species' responses to warming springs. The temporal match-mismatch hypothesis suggests that timing of breeding in animals is selected to match with food availability (synchrony. Alternatively, time-dependent breeding success (the date hypothesis can result from other seasonally deteriorating ecological conditions such as intra- or interspecific competition or predation. We studied the effects of two ultimate factors on the timing of breeding, synchrony and other time-dependent factors (time-dependence, in sympatric populations of two related forest-dwelling passerine species, the great tit (Parus major and the willow tit (Poecile montanus by modelling recruitment with long-term capture-recapture data. We hypothesized that these two factors have different relevance for fitness in these species. We found that local recruitment in both species showed quadratic relationships with both time-dependence and synchrony. However, the importance of these factors was markedly different between the studied species. Caterpillar food played a predominant role in predicting the timing of breeding of the great tit. In contrast, for the willow tit time-dependence modelled as timing in relation to conspecifics was more important for local recruitment than synchrony. High caterpillar biomass experienced during the pre- and post-fledging periods increased local recruitment of both species. These contrasting results confirm that these species experience different selective pressures upon the timing of breeding, and hence responses to climate change may differ. Detailed information about life-history strategies is required to understand the effects of climate change, even in closely related taxa. The temporal match-mismatch hypothesis should be extended to consider

  13. Oral vaccination of wildlife against rabies: Differences among host species in vaccine uptake efficiency.

    Science.gov (United States)

    Vos, Ad; Freuling, Conrad M; Hundt, Boris; Kaiser, Christiane; Nemitz, Sabine; Neubert, Andreas; Nolden, Tobias; Teifke, Jens P; Te Kamp, Verena; Ulrich, Reiner; Finke, Stefan; Müller, Thomas

    2017-07-13

    Oral vaccination using attenuated and recombinant rabies vaccines has been proven a powerful tool to combat rabies in wildlife. However, clear differences have been observed in vaccine titers needed to induce a protective immune response against rabies after oral vaccination in different reservoir species. The mechanisms contributing to the observed resistance against oral rabies vaccination in some species are not completely understood. Hence, the immunogenicity of the vaccine virus strain, SPBN GASGAS, was investigated in a species considered to be susceptible to oral rabies vaccination (red fox) and a species refractory to this route of administration (striped skunk). Additionally, the dissemination of the vaccine virus in the oral cavity was analyzed for these two species. It was shown that the palatine tonsils play a critical role in vaccine virus uptake. Main differences could be observed in palatine tonsil infection between both species, revealing a locally restricted dissemination of infected cells in foxes. The absence of virus infected cells in palatine tonsils of skunks suggests a less efficient uptake of or infection by vaccine virus which may lead to a reduced response to oral vaccination. Understanding the mechanisms of oral resistance to rabies virus vaccine absorption and primary replication may lead to the development of novel strategies to enhance vaccine efficacy in problematic species like the striped skunk. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

  14. Artificial light at night affects sleep behaviour differently in two closely related songbird species.

    Science.gov (United States)

    Sun, Jiachen; Raap, Thomas; Pinxten, Rianne; Eens, Marcel

    2017-12-01

    Artificial light at night (ALAN) or light pollution is an increasing and worldwide problem. There is growing concern that because of the disruption of natural light cycles, ALAN may pose serious risks for wildlife. While ALAN has been shown to affect many aspects of animal behaviour and physiology, few studies have experimentally studied whether individuals of different species in the wild respond differently to ALAN. Here, we investigated the effect of ALAN on sleep behaviour in two closely related songbird species inhabiting the same study area and roosting/breeding in similar nest boxes. We experimentally exposed free-living great tits (Parus major) and blue tits (Cyanistes caeruleus) to artificial light inside their nest boxes and observed changes in their sleep behaviour compared to the previous night when the nest boxes were dark. In line with previous studies, sleep behaviour of both species did not differ under dark conditions. ALAN disrupted sleep in both great and blue tits. However, compared to blue tits, great tits showed more pronounced effects and more aspects of sleep were affected. Light exposed great tits entered the nest boxes and fell asleep later, woke up and exited the nest boxes earlier, and the total sleep amount and sleep percentage were reduced. By contrast, these changes in sleep behaviour were not found in light exposed blue tits. Our field experiment, using exactly the same light manipulation in both species, provides direct evidence that two closely related species respond differently to ALAN, while their sleep behaviour under dark conditions was similar. Our research suggests that findings for one species cannot necessarily be generalised to other species, even closely-related species. Furthermore, species-specific effects could have implications for community dynamics. Copyright © 2017 Elsevier Ltd. All rights reserved.

  15. Biodiversity differences between managed and unmanaged forests: meta-analysis of species richness in Europe.

    Science.gov (United States)

    Paillet, Yoan; Bergès, Laurent; Hjältén, Joakim; Odor, Péter; Avon, Catherine; Bernhardt-Römermann, Markus; Bijlsma, Rienk-Jan; De Bruyn, Luc; Fuhr, Marc; Grandin, Ulf; Kanka, Robert; Lundin, Lars; Luque, Sandra; Magura, Tibor; Matesanz, Silvia; Mészáros, Ilona; Sebastià, M-Teresa; Schmidt, Wolfgang; Standovár, Tibor; Tóthmérész, Béla; Uotila, Anneli; Valladares, Fernando; Vellak, Kai; Virtanen, Risto

    2010-02-01

    Past and present pressures on forest resources have led to a drastic decrease in the surface area of unmanaged forests in Europe. Changes in forest structure, composition, and dynamics inevitably lead to changes in the biodiversity of forest-dwelling species. The possible biodiversity gains and losses due to forest management (i.e., anthropogenic pressures related to direct forest resource use), however, have never been assessed at a pan-European scale. We used meta-analysis to review 49 published papers containing 120 individual comparisons of species richness between unmanaged and managed forests throughout Europe. We explored the response of different taxonomic groups and the variability of their response with respect to time since abandonment and intensity of forest management. Species richness was slightly higher in unmanaged than in managed forests. Species dependent on forest cover continuity, deadwood, and large trees (bryophytes, lichens, fungi, saproxylic beetles) and carabids were negatively affected by forest management. In contrast, vascular plant species were favored. The response for birds was heterogeneous and probably depended more on factors such as landscape patterns. The global difference in species richness between unmanaged and managed forests increased with time since abandonment and indicated a gradual recovery of biodiversity. Clearcut forests in which the composition of tree species changed had the strongest effect on species richness, but the effects of different types of management on taxa could not be assessed in a robust way because of low numbers of replications in the management-intensity classes. Our results show that some taxa are more affected by forestry than others, but there is a need for research into poorly studied species groups in Europe and in particular locations. Our meta-analysis supports the need for a coordinated European research network to study and monitor the biodiversity of different taxa in managed and unmanaged

  16. Different species of basil need different ammonium to nitrate ratio in hydroponics' system

    Directory of Open Access Journals (Sweden)

    M. SAADATIAN

    2015-12-01

    Full Text Available Basil is a very important medicinal plant and culinary spice, and is marketed fresh, dried or frozen. In crop nutrition, nitrogen is essential for plant growth and as a macro-element, is part of the proteins’ structure and participates in the metabolic processes involved in the synthesis and energy transfer. It has been shown that a balance between ammonium and nitrate favors plant growth and that the degree of benefit varies among crops. This study was conducted to evaluate the growth of two varieties of basil in function of four nutrient solutions containing different NH4+/NO3- ratios. Results showed that different variety response differently to nutrient solution. Although the highest yield in both varieties (sweet and purple was obtained when fed by nutrient solution without ammonium but their response on quality indices were different due to nitrate ammonium ratio in nutrient solutions. The highest total phenol content of sweet and purple basil was 92 and 100 mg gallic acid equivalent per gram of dry weight respectively, while the highest antioxidant capacity was obtained in purple variety grown in nutrient solution 2 (NH4+:1/NO3:4 and the lowest value were related to sweet variety with the same nutrient solution. Moderate content of total nitrogen can be suitable for sweet variety while for purple variety nutrient solution with low amount of ammonium can be more suitable.

  17. Autoradiography in mice after intravenous and intragastric administration of phenolphthalein and desacetylated bisacodyl, two laxative diphenols of the diphenylmethane group

    International Nuclear Information System (INIS)

    Sund, R.B.; Hetland, H.S.; Nafstad, I.

    1986-01-01

    Mice were injected with 14-C-labelled phenolphthalein (I) and desacetylated bisacodyl (II), or given the drugs by gastric tube. Whole-body autoradiography made at different survival times, and evaluated by densitometry, showed that the tissues of peripheral organs either had radioactivity levels similar to, or, in most cases, lower than the blood. The only exception was renal tissue, in which 14-C-activity accumulated above blood levels when II was given. Radioactivity was not demonstrated in the central nervous system, except for low levels transitory present following the injection of II. Substantially higher levels than in blood were on the other hand noted in bile and intestinal contents, and in urine. The experiments showed that both drugs are absorbed from the GI tract, and subsequently in part excreted in bile, in analogy with previous findings in the rat. Autoradiographic evidence was obtained that renal excretion rates were greater for II than for I. This was supported by liquid scintillation counting on solubilised remnants for the kidney. Both I and II were excreted mainly as metabolites. TLC of extracts of organ and excreta remnants indicated that glucuronides were the main metabolites present

  18. Plant species differ in early seedling growth and tissue nutrient responses to arbuscular and ectomycorrhizal fungi.

    Science.gov (United States)

    Holste, Ellen K; Kobe, Richard K; Gehring, Catherine A

    2017-04-01

    Experiments with plant species that can host both arbuscular mycorrhizal fungi (AMF) and ectomycorrhizal fungi (EMF) are important to separating the roles of fungal type and plant species and understanding the influence of the types of symbioses on plant growth and nutrient acquisition. We examined the effects of mycorrhizal fungal type on the growth and tissue nutrient content of two tree species (Eucalyptus grandis and Quercus costaricensis) grown under four nutrient treatments (combinations of low versus high nitrogen (N) and phosphorus (P) with different N:P ratios) in the greenhouse. Trees were inoculated with unidentified field mixtures of AMF or EMF species cultivated on root fragments of AMF- or EMF-specific bait plants. In E. grandis, inoculation with both AMF and EMF positively affected belowground plant dry weight and negatively affected aboveground dry weight, while only inoculation with AMF increased tissue nutrient content. Conversely, Q. costaricensis dry weight and nutrient content did not differ significantly among inoculation treatments, potentially due to its dependence on cotyledon reserves for growth. Mineral nutrition of both tree species differed with the ratio of N to P applied while growth did not. Our results demonstrate that both tree species' characteristics and the soil nutrient environment can affect how AMF and EMF interact with their host plants. This research highlights the importance of mycorrhizal fungal-tree-soil interactions during early seedling growth and suggests that differences between AMF and EMF associations may be crucial to understanding forest ecosystem functioning.

  19. Development of digital gamma-activation autoradiography for analysis of samples of large area

    International Nuclear Information System (INIS)

    Kolotov, V.P.; Grozdov, D.S.; Dogadkin, N.N.; Korobkov, V.I.

    2011-01-01

    Gamma-activation autoradiography is a prospective method for screening detection of inclusions of precious metals in geochemical samples. Its characteristics allow analysis of thin sections of large size (tens of cm2), that favourably distinguishes it among the other methods for local analysis. At the same time, the activating field of the accelerator bremsstrahlung, displays a sharp intensity decrease relative to the distance along the axis. A method for activation dose ''equalization'' during irradiation of the large size thin sections has been developed. The method is based on the usage of a hardware-software system. This includes a device for moving the sample during the irradiation, a program for computer modelling of the acquired activating dose for the chosen kinematics of the sample movement and a program for pixel-by pixel correction of the autoradiographic images. For detection of inclusions of precious metals, a method for analysis of the acquired dose dynamics during sample decay has been developed. The method is based on the software processing pixel by pixel a time-series of coaxial autoradiographic images and generation of the secondary meta-images allowing interpretation regarding the presence of interesting inclusions based on half-lives. The method is tested for analysis of copper-nickel polymetallic ores. The developed solutions considerably expand the possible applications of digital gamma-activation autoradiography. (orig.)

  20. Cholinergic Depletion in Alzheimer’s Disease Shown by [18F]FEOBV Autoradiography

    Directory of Open Access Journals (Sweden)

    Maxime J. Parent

    2013-01-01

    Full Text Available Rationale. Alzheimer’s Disease (AD is a neurodegenerative condition characterized in part by deficits in cholinergic basalocortical and septohippocampal pathways. [18F]Fluoroethoxybenzovesamicol ([18F]FEOBV, a Positron Emission Tomography ligand for the vesicular acetylcholine transporter (VAChT, is a potential molecular agent to investigate brain diseases associated with presynaptic cholinergic losses. Purpose. To demonstrate this potential, we carried out an [18F]FEOBV autoradiography study to compare postmortem brain tissues from AD patients to those of age-matched controls. Methods. [18F]FEOBV autoradiography binding, defined as the ratio between regional grey and white matter, was estimated in the hippocampus (13 controls, 8 AD and prefrontal cortex (13 controls, 11 AD. Results. [18F]FEOBV binding was decreased by 33% in prefrontal cortex, 25% in CA3, and 20% in CA1. No changes were detected in the dentate gyrus of the hippocampus, possibly because of sprouting or upregulation toward the resilient glutamatergic neurons of the dentate gyrus. Conclusion. This is the first demonstration of [18F]FEOBV focal binding changes in cholinergic projections to the cortex and hippocampus in AD. Such cholinergic synaptic (and more specifically VAChT alterations, in line with the selective basalocortical and septohippocampal cholinergic losses documented in AD, indicate that [18F]FEOBV is indeed a promising ligand to explore cholinergic abnormalities in vivo.

  1. Neutron-induced autoradiography used in the investigation of modern pigments in paintings of known composition

    International Nuclear Information System (INIS)

    Aderhold, H.C.; Taft, W.S.

    1992-01-01

    Neutron-Induced Autoradiography is an effective analytical technique for mapping the location of a number of specified pigments in paintings. Most paintings which have been examined through neutron-induced autoradiography to date were painted prior to the introduction of the most common of modern pigments. By understanding die nuclear properties of these pigments, as revealed by this technique, a more informed analysis of modem paintings may result This investigation is part of an ongoing program to develop case studies for presentation to an undergraduate class at Cornell University, 'Art, Isotopes and Analysis'. We have found that this technique is a graphic and effective method of presenting nuclear reactions and radioactivity to non-specialists. Sample paintings are produced using pigments of known composition. A sequence of discreet layers, each a separate image, is documented in order to establish a reference for accurately interpreting the autoradiographs. The painting is then activated in the Cornell TRIGA reactor and a series of autoradiographs produced Gamma spectra taken before and after each film exposure gives us detailed information on which radioisotopes (and therefore, which pigments), are active. (author)

  2. Molecular Evolution at a Meiosis Gene Mediates Species Differences in the Rate and Patterning of Recombination.

    Science.gov (United States)

    Brand, Cara L; Cattani, M Victoria; Kingan, Sarah B; Landeen, Emily L; Presgraves, Daven C

    2018-04-23

    Crossing over between homologous chromosomes during meiosis repairs programmed DNA double-strand breaks, ensures proper segregation at meiosis I [1], shapes the genomic distribution of nucleotide variability in populations, and enhances the efficacy of natural selection among genetically linked sites [2]. Between closely related Drosophila species, large differences exist in the rate and chromosomal distribution of crossing over. Little, however, is known about the molecular genetic changes or population genetic forces that mediate evolved differences in recombination between species [3, 4]. Here, we show that a meiosis gene with a history of rapid evolution acts as a trans-acting modifier of species differences in crossing over. In transgenic flies, the dicistronic gene, mei-217/mei-218, recapitulates a large part of the species differences in the rate and chromosomal distribution of crossing over. These phenotypic differences appear to result from changes in protein sequence not gene expression. Our population genetics analyses show that the protein-coding sequence of mei-218, but not mei-217, has a history of recurrent positive natural selection. By modulating the intensity of centromeric and telomeric suppression of crossing over, evolution at mei-217/-218 has incidentally shaped gross differences in the chromosomal distribution of nucleotide variability between species. We speculate that recurrent bouts of adaptive evolution at mei-217/-218 might reflect a history of coevolution with selfish genetic elements. Copyright © 2018 Elsevier Ltd. All rights reserved.

  3. Differences in questing tick species distribution between Atlantic and continental climate regions in Spain.

    Science.gov (United States)

    Barandika, J F; Olmeda, S A; Casado-Nistal, M A; Hurtado, A; Juste, R A; Valcárcel, F; Anda, P; García-Pérez, A L

    2011-01-01

    Climate and vegetation in Spain vary from north to south, affecting tick distribution and consequently the presence of tick-borne diseases. The aim of this study was to investigate throughout a 2-yr study the distribution of the different exophilic questing tick species present in 18 areas: eight located in central and 10 in northern Spain. The same methodology was used in both areas, sampling vegetation on a monthly basis by blanket dragging for 20- to 30-min intervals. A total of 12 species belonging to the genera Ixodes, Haemaphysalis, Rhipicephalus, Dermacentor, and Hyalomma was identified. Differences in species distribution and prevalence were dramatically different. The most frequent and abundant species in northern Spain were Ixodes ricinus (67% of adult ticks) and Haemaphysalis punctata (8%), whereas Hyalomma lusitanicum (86%) and Dermacentor marginatus (12%) were the most abundant in central Spain. There were important differences in the monthly seasonal patterns for the different tick species. These results highlight important differences in tick distribution in neighboring areas and underline the need for ongoing surveillance programs to monitor tick population dynamics and the prevalence of tick-borne pathogens.

  4. Differences in metabolic costs of terrestrial mobility in two closely related species of albatross.

    Science.gov (United States)

    Kabat, Alexander P; Phillips, Richard A; Croxall, John P; Butler, Patrick J

    2007-08-01

    Black-browed albatrosses Thalassarche melanophrys typically colonise steeper habitats than grey-headed albatrosses T. chrysostoma. The present study investigated the effect of colony philopatry on terrestrial locomotory ability in these two species, to determine: (1) if there is a difference in terrestrial locomotory ability between these two closely related species, and (2) what physiological or behavioural adaptations may account for any differences identified. We examined the metabolic cost, mechanical efficiency on an incline, and gait characteristics of terrestrial locomotion of these two species on both level and inclined planes. T. chrysostoma were able to perform at a significantly greater speed than T. melanophrys without reaching a significantly different maximal rate of oxygen consumption (V(O(2))). Conversely, T. melanophrys were able to move up a significantly steeper incline than T. chrysostoma while maintaining a similar maximal V(O(2)). Each species demonstrates stride length, force production (behavioural) and leg length (morphological) adaptations that minimise the cost of traversing their chosen colonies, indicating a clear relationship between terrestrial performance and local topography. However, it is not possible to determine if the difference in locomotory ability results from differences in colony topography, or if choice of colony site is dictated by the ability of the species to traverse different terrain.

  5. Variability of the Structural Coloration in Two Butterfly Species with Different Prezygotic Mating Strategies.

    Science.gov (United States)

    Piszter, Gábor; Kertész, Krisztián; Bálint, Zsolt; Biró, László Péter

    2016-01-01

    Structural coloration variability was investigated in two Blue butterfly species that are common in Hungary. The males of Polyommatus icarus (Common Blue) and Plebejus argus (Silver-studded Blue) use their blue wing coloration for conspecific recognition. Despite living in the same type of habitat, these two species display differences in prezygotic mating strategy: the males of P. icarus are patrolling, while P. argus males have sedentary behavior. Therefore, the species-specific photonic nanoarchitecture, which is the source of the structural coloration, may have been subjected to different evolutionary effects. Despite the increasing interest in photonic nanoarchitectures of biological origin, there is a lack of studies focused on the biological variability of structural coloration that examine a statistically relevant number of individuals from the same species. To investigate possible structural color variation within the same species in populations separated by large geographical distances, climatic differences, or applied experimental conditions, one has to be able to compare these variations to the normal biological variability within a single population. The structural coloration of the four wings of 25 male individuals (100 samples for each species) was measured and compared using different light-collecting setups: perpendicular and with an integrating sphere. Significant differences were found in the near UV wavelength region that are perceptible by these polyommatine butterflies but are invisible to human observers. The differences are attributed to the differences in the photonic nanoarchitecture in the scales of these butterflies. Differences in the intensity of structural coloration were also observed and were tentatively attributed to the different prezygotic mating strategies of these insects. Despite the optical complexity of the scale covered butterfly wings, for sufficiently large sample batches, the averaged normal incidence measurements and

  6. Variability of the Structural Coloration in Two Butterfly Species with Different Prezygotic Mating Strategies.

    Directory of Open Access Journals (Sweden)

    Gábor Piszter

    Full Text Available Structural coloration variability was investigated in two Blue butterfly species that are common in Hungary. The males of Polyommatus icarus (Common Blue and Plebejus argus (Silver-studded Blue use their blue wing coloration for conspecific recognition. Despite living in the same type of habitat, these two species display differences in prezygotic mating strategy: the males of P. icarus are patrolling, while P. argus males have sedentary behavior. Therefore, the species-specific photonic nanoarchitecture, which is the source of the structural coloration, may have been subjected to different evolutionary effects. Despite the increasing interest in photonic nanoarchitectures of biological origin, there is a lack of studies focused on the biological variability of structural coloration that examine a statistically relevant number of individuals from the same species. To investigate possible structural color variation within the same species in populations separated by large geographical distances, climatic differences, or applied experimental conditions, one has to be able to compare these variations to the normal biological variability within a single population. The structural coloration of the four wings of 25 male individuals (100 samples for each species was measured and compared using different light-collecting setups: perpendicular and with an integrating sphere. Significant differences were found in the near UV wavelength region that are perceptible by these polyommatine butterflies but are invisible to human observers. The differences are attributed to the differences in the photonic nanoarchitecture in the scales of these butterflies. Differences in the intensity of structural coloration were also observed and were tentatively attributed to the different prezygotic mating strategies of these insects. Despite the optical complexity of the scale covered butterfly wings, for sufficiently large sample batches, the averaged normal incidence

  7. Variability of the Structural Coloration in Two Butterfly Species with Different Prezygotic Mating Strategies

    Science.gov (United States)

    Kertész, Krisztián; Bálint, Zsolt; Biró, László Péter

    2016-01-01

    Structural coloration variability was investigated in two Blue butterfly species that are common in Hungary. The males of Polyommatus icarus (Common Blue) and Plebejus argus (Silver-studded Blue) use their blue wing coloration for conspecific recognition. Despite living in the same type of habitat, these two species display differences in prezygotic mating strategy: the males of P. icarus are patrolling, while P. argus males have sedentary behavior. Therefore, the species-specific photonic nanoarchitecture, which is the source of the structural coloration, may have been subjected to different evolutionary effects. Despite the increasing interest in photonic nanoarchitectures of biological origin, there is a lack of studies focused on the biological variability of structural coloration that examine a statistically relevant number of individuals from the same species. To investigate possible structural color variation within the same species in populations separated by large geographical distances, climatic differences, or applied experimental conditions, one has to be able to compare these variations to the normal biological variability within a single population. The structural coloration of the four wings of 25 male individuals (100 samples for each species) was measured and compared using different light-collecting setups: perpendicular and with an integrating sphere. Significant differences were found in the near UV wavelength region that are perceptible by these polyommatine butterflies but are invisible to human observers. The differences are attributed to the differences in the photonic nanoarchitecture in the scales of these butterflies. Differences in the intensity of structural coloration were also observed and were tentatively attributed to the different prezygotic mating strategies of these insects. Despite the optical complexity of the scale covered butterfly wings, for sufficiently large sample batches, the averaged normal incidence measurements and

  8. Fifty shades of white: how white feather brightness differs among species

    Science.gov (United States)

    Igic, Branislav; D'Alba, Liliana; Shawkey, Matthew D.

    2018-04-01

    White colouration is a common and important component of animal visual signalling and camouflage, but how and why it varies across species is poorly understood. White is produced by wavelength-independent and diffuse scattering of light by the internal structures of materials, where the degree of brightness is related to the amount of light scattered. Here, we investigated the morphological basis of brightness differences among unpigmented pennaceous regions of white body feathers across 61 bird species. Using phylogenetically controlled comparisons of reflectance and morphometric measurements, we show that brighter white feathers had larger and internally more complex barbs than duller white feathers. Higher brightness was also associated with more closely packed barbs and barbules, thicker and longer barbules, and rounder and less hollow barbs. Larger species tended to have brighter white feathers than smaller species because they had thicker and more complex barbs, but aquatic species were not significantly brighter than terrestrial species. As similar light scattering principals affect the brightness of chromatic signals, not just white colours, these findings help broaden our general understanding of the mechanisms that affect plumage brightness. Future studies should examine how feather layering on a bird's body contributes to differences between brightness of white plumage patches within and across species.

  9. Assessment of bioaccumulation of heavy metals by different plant species grown on fly ash dump.

    Science.gov (United States)

    Jambhulkar, Hemlata P; Juwarkar, Asha A

    2009-05-01

    A field experiment was conducted on a 10-hectare area on fly ash dump at Khaperkheda Thermal Power Plant, Nagpur, India, where different ecologically and economically important plant species were planted using bioremediation technology. The technology involves the use of organic amendment and selection of suitable plant species along with site-specific nitrogen-fixing strains of biofertilizers. The study was conducted to find out the metal accumulation potential of different plant species. The total heavy metal contents in fly ash were determined and their relative abundance was found in the order of Fe>Mn>Zn>Cu>Ni>Cr>Pb>Cd. Fly ash samples had acidic pH, low electrical conductivity, low level of organic carbon and trace amounts of N and P. Plantation of divergent species was done on fly ash dump using the bioremediation technique. After 3 years of plantation, luxuriant growth of these species was found covering almost the entire fly ash dump. The results of the metal analysis of these species indicated that iron accumulated to the greatest extent in vegetation followed by Mn, Ni, Zn, Cu, Cr and Pb. Cassia siamea was found to accumulate all metals at higher concentrations compared to other species. The experimental study revealed that C. siamea could be used as a hyper-accumulator plant for bioremediation of fly ash dump.

  10. Immunogenic proteins specific to different bird species in bird fancier's lung.

    Science.gov (United States)

    Rouzet, Adeline; Reboux, Gabriel; Rognon, Bénédicte; Barrera, Coralie; De Vuyst, Paul; Dalphin, Jean-Charles; Millon, Laurence; Roussel, Sandrine

    2014-01-01

    Bird fancier's lung (BFL) is a disease produced by exposure to avian proteins present in droppings, blooms, and serum of a variety of birds. Although serological test results are currently used to confirm clinical diagnosis of the disease, bird species specificity is poorly understood. This study aimed to contribute to a better understanding of the specificity of immunogenic proteins revealed from the droppings of three bird species. Sera from four patients with BFL and two controls without exposure were analyzed by Western blotting with antigens from droppings of two pigeon and budgerigar strains and two hen species. When the antigens from the droppings of the three bird species were compared, the profile of immunogenic proteins was different and there were similarities between strains of the same species. Only one 68-kD protein was common to pigeon and budgerigar droppings, while proteins of 200, 175, 140, 100, and 35 kD were detected as specific in one bird species. These results provide insight to further characterize these proteins, and to design new serological tests specific to different bird species. These tests may help to refine strategies of antigenic exclusion and also to allow a patient compensation in case of BFL of occupational origin.

  11. Ecophysiological Traits of Leaves of Three Marsilea Species Distributed in Different Geographical Regions

    Directory of Open Access Journals (Sweden)

    Tai-Chung Wu

    2011-11-01

    Full Text Available Marsilea, an amphibian fern genus (containing ca. 80 species characterized by their unusual leaves and reproductive structures, is distributed over the five continents. To investigate the adaptation traits of three Marsilea species (M. crenata, M. quadrifolia, and M. schelpiana, distributed in different geographic regions, to terrestrial conditions, we compared morphological features, optical properties and photosynthetic performance of leaflets of the three species grown in terrestrial environment. The results showed that leaflets of the three species had significant differences in some of the ecophysiogical traits. Among the three species, M. quadrifolia (distributed in temperate region where receiving low precipitation had the highest trichome density on its leaflet surface and the highest water use efficiency, M. schelpiana (mainly in southern Africa where accepting high level of solar irradiance had the tallest petiole and the highest leaf dissection index, total stomatal pore area index, PSII electron transport rate and photosaturated photosynthetic rate, M. crenata (mainly in southeastern Asia region where receiving high precipitation and with high humidity had the lowest leaf dissection index and water use efficiency. Accordingly, leaf characteristics of the three Marsilea species reflect the climate pattern of their habitats. The results also suggest that water availability and light intensity are two of the important factors contributing to the geographic distribution of the three species.

  12. Evolution of Heat Sensors Drove Shifts in Thermosensation between Xenopus Species Adapted to Different Thermal Niches.

    Science.gov (United States)

    Saito, Shigeru; Ohkita, Masashi; Saito, Claire T; Takahashi, Kenji; Tominaga, Makoto; Ohta, Toshio

    2016-05-20

    Temperature is one of the most critical environmental factors affecting survival, and thus species that inhabit different thermal niches have evolved thermal sensitivities suitable for their respective habitats. During the process of shifting thermal niches, various types of genes expressed in diverse tissues, including those of the peripheral to central nervous systems, are potentially involved in the evolutionary changes in thermosensation. To elucidate the molecular mechanisms behind the evolution of thermosensation, thermal responses were compared between two species of clawed frogs (Xenopus laevis and Xenopus tropicalis) adapted to different thermal environments. X. laevis was much more sensitive to heat stimulation than X. tropicalis at the behavioral and neural levels. The activity and sensitivity of the heat-sensing TRPA1 channel were higher in X. laevis compared with those of X. tropicalis The thermal responses of another heat-sensing channel, TRPV1, also differed between the two Xenopus species. The species differences in Xenopus TRPV1 heat responses were largely determined by three amino acid substitutions located in the first three ankyrin repeat domains, known to be involved in the regulation of rat TRPV1 activity. In addition, Xenopus TRPV1 exhibited drastic species differences in sensitivity to capsaicin, contained in chili peppers, between the two Xenopus species. Another single amino acid substitution within Xenopus TRPV1 is responsible for this species difference, which likely alters the neural and behavioral responses to capsaicin. These combined subtle amino acid substitutions in peripheral thermal sensors potentially serve as a driving force for the evolution of thermal and chemical sensation. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

  13. Plant Regeneration and Somatic Embryogenesis from Immature Embryos Derived through Interspecific Hybridization among Different Carica Species

    OpenAIRE

    Azad, Md. Abul; Rabbani, Md. Golam; Amin, Latifah

    2012-01-01

    Plant regeneration and somatic embryogenesis through interspecific hybridization among different Carica species were studied for the development of a papaya ringspot virus-resistant variety. The maximum fruit sets were recorded from the cross of the native variety C. papaya cv. Shahi with the wild species C. cauliflora. The highest hybrid embryos were recorded at 90 days after pollination and the embryos were aborted at 150 days after pollination. The immature hybrid embryos were used for pla...

  14. Fundamental difference in life history traits of two species of Cataglyphis ants

    Directory of Open Access Journals (Sweden)

    Knaden Markus

    2006-12-01

    Full Text Available Abstract Background The two sympatric species of Tunisian desert ants, Cataglyphis bicolor and C. mauritanica, do not exhibit any differences in their foraging ecology, e.g. in food preferences and in their spatial and temporal activity patterns. Here we show that instead the two species markedly differ in their life histories. Results We analysed mtDNA of specimens that were collected along a 250-km transect. C. bicolor exhibited a genetically unstructured population (with the genetic and geographic distances among colonies not being correlated. On the contrary the populations of the polygynous C. mauritanica were clearly structured, i.e. exhibited a strong correlation between genetic and geographic distances. This difference is in accordance with large queen dispersal distances due to far-reaching mating flights in C. bicolor and small queen dispersal distances due to colony foundation by budding in C. mauritanica. Furthermore, wherever we found populations of both species to coexist within the same habitat, the habitat was used agriculturally. Mapping nest positions over periods of several years showed that plowing dramatically decreased the nest densities of either species. Conclusion We conclude that owing to its greater queen dispersal potential C. bicolor might be more successful in quickly re-colonizing disturbed areas, while the slowly dispersing C. mauritanica could later out-compete C. bicolor by adopting its effective nest-budding strategy. According to this scenario the observed sympatry of the two species might be an intermediate stage in which faster colonization by one species and more powerful exploitation of space by the other species have somehow balanced each other out. In conclusion, C. bicolor and C. mauritanica represent an example where environmental disturbances in combination with different life histories might beget sympatry in congeneric species with overlapping niches.

  15. A simple and efficient method for isolating small RNAs from different plant species

    OpenAIRE

    Rosas-Cárdenas, Flor de Fátima; Durán-Figueroa, Noé; Vielle-Calzada, Jean-Philippe; Cruz-Hernández, Andrés; Marsch-Martínez, Nayelli; de Folter, Stefan

    2011-01-01

    Abstract Background Small RNAs emerged over the last decade as key regulators in diverse biological processes in eukaryotic organisms. To identify and study small RNAs, good and efficient protocols are necessary to isolate them, which sometimes may be challenging due to the composition of specific tissues of certain plant species. Here we describe a simple and efficient method to isolate small RNAs from different plant species. Results We developed a simple and efficient method to isolate sma...

  16. Culturing requirements and commercial quality of four different species of Ulva (Ulvales, chlorophyta)

    OpenAIRE

    Cremades Ugarte, Javier; Casais, Eduardo; Couce, A.; Alamrousi, A; Pintado Valverde, José; Oca Baradad, Joan; Masaló Llorà, Ingrid; Jiménez de Ridder, Patrícia

    2016-01-01

    The commercial production of Ulva spp. by aquaculture is gaining in importance due both to the qualitative and quantitative increase in the use of the harvested biomass and its new applications in inland IMTA techniques. However, very little is known about the specific culturing requirements and commercial quality of the different species of Ulva. The aim of this work is to try from this point of view four Ulva species that could be grown in southern Europe: U. australis, U. fasciata...

  17. STANDING HERBAGE BIOMASS UNDER DIFFERENT TREE SPECIES DISPERSED IN PASTURES OF CATTLE FARMS

    Directory of Open Access Journals (Sweden)

    Humberto Esquivel-Mimenza

    2013-08-01

    Full Text Available The study conducted in a tropical dry ecosystem at Cañas, Guanacaste, Costa Rica (10o 11´ N and 84o15´W measure the standing herbage biomass (SHB availability and quality under six isolated tree species of different canopy architecture dispersed in active Brachiaria brizantha pastures and compare it to that growing at full sun light. Standing herbage biomass (HB harvesting and Photosynthetic active radiation (PAR readings were taken at three different periods in a paired sample scheme. Of the six tree species studied, Enterolobium cyclocarpum had the largest mean crown cover while Acrocomia aculeata had the smallest. Significant differences were observed between species (P = 0.0002 and seasons (P<0.008 for the percentage of PAR transmitted under the canopy but PAR levels obtained under all species were consistent throughout seasons since the interaction between species and season was not significantly different (P=0.98. Lower PAR readings (<50% were taken under the canopies E. cyclocarpum and Guazuma ulmifolia (21.7 and 33.7 % respectively. Standing herbage biomass (SHB harvested under the crown of isolated mature individual tree species was significantly lower (P<0.001 than in open pasture areas for all tree species except that of A. aculeate but SHB crude protein content, was higher underneath all tree canopies. It can conclude that light reduction caused by tree canopies reduces SHB availability and increases the quality underneath tree canopies compared to areas of full sun but these varies accordingly to tree species and seasons.

  18. Differences in Crossover Frequency and Distribution among Three Sibling Species of Drosophila

    OpenAIRE

    True, J. R.; Mercer, J. M.; Laurie, C. C.

    1996-01-01

    Comparisons of the genetic and cytogenetic maps of three sibling species of Drosophila reveal marked differences in the frequency and cumulative distribution of crossovers during meiosis. The maps for two of these species, Drosophila melanogaster and D. simulans, have previously been described, while this report presents new map data for D. mauritiana, obtained using a set of P element markers. A genetic map covering nearly the entire genome was constructed by estimating the recombination fra...

  19. Effects of two different AMF species on growth and nutrient content ...

    African Journals Online (AJOL)

    This study was carried out to determine the effects of different Arbuscular Mycorrhizal Fungi (AMF) species on the growth and nutrient contents of pepper seedlings (cv. Demre) grown under moderate salt stress. Two different mychorrhizas (Glomus intraradices and Gigaspora margarita) were tested on a growing media ...

  20. Root morphological plasticity and nutient aquisition of perennial grass species from habitats of different nutrient availability.

    NARCIS (Netherlands)

    Fransen, B.; Kroon, de H.; Berendse, F.

    1998-01-01

    Abstract We studied the root foraging ability and its consequences for the nutrient acquisition of five grass species that differ in relative growth rate and that occur in habitats that differ widely in nutrient availability. Foraging responses were quantified, based on the performance of the plants

  1. Pool-Type Fishways: Two Different Morpho-Ecological Cyprinid Species Facing Plunging and Streaming Flows

    Science.gov (United States)

    Branco, Paulo; Santos, José M.; Katopodis, Christos; Pinheiro, António; Ferreira, Maria T.

    2013-01-01

    Fish are particularly sensitive to connectivity loss as their ability to reach spawning grounds is seriously affected. The most common way to circumvent a barrier to longitudinal connectivity, and to mitigate its impacts, is to implement a fish passage device. However, these structures are often non-effective for species with different morphological and ecological characteristics so there is a need to determine optimum dimensioning values and hydraulic parameters. The aim of this work is to study the behaviour and performance of two species with different ecological characteristics (Iberian barbel Luciobarbus bocagei–bottom oriented, and Iberian chub Squalius pyrenaicus–water column) in a full-scale experimental pool-type fishway that offers two different flow regimes–plunging and streaming. Results showed that both species passed through the surface notch more readily during streaming flow than during plunging flow. The surface oriented species used the surface notch more readily in streaming flow, and both species were more successful in moving upstream in streaming flow than in plunging flow. Streaming flow enhances upstream movement of both species, and seems the most suitable for fishways in river systems where a wide range of fish morpho-ecological traits are found. PMID:23741465

  2. Different chemical cues originating from a shared predator induce common defense responses in two prey species.

    Science.gov (United States)

    Takahara, Teruhiko; Doi, Hideyuki; Kohmatsu, Yukihiro; Yamaoka, Ryohei

    2013-01-01

    In freshwater ecosystems, inducible defenses that involve behavioral or morphological changes in response to chemical cue detection are key phenomena in prey-predator interactions. Many species with different phylogenetic and ecological traits (e.g., general activity patterns and microhabitats) use chemical cues to avoid predators. We hypothesized that prey species with a shared predator, but having different ecological traits, would be adapted to detect different chemical cues from the predator. However, the proximate mechanisms by which prey use chemical cues to avoid predation remain little known. Here, we tested our hypothesis by using fractionated chemical components from predatory dragonfly nymphs (Lesser Emperor, Anax parthenope julius) to trigger anti-predator behavioral responses in two anuran tadpoles, the wrinkled frog Glandirana (Rana) rugosa and the Japanese tree frog Hyla japonica. Glandirana rugosa detected chemical cues that had either high or low hydrophobic properties, but H. japonica responded only to chemical cues with hydrophilic properties. During the normal behaviors of these tadpole species, G. rugosa remains immobile in benthic habitats, whereas H. japonica exhibits active swimming at the surface or in the middle of the water column. As we had hypothesized, these tadpole species, which have different general activity levels and microhabitats, detected different chemical cues that were exuded by their shared predator and responded by changing their activities to avoid predation. The specific chemical cues detected by each tadpole species are likely to have characteristics that optimize effective predator detection and encounter avoidance of the shared dragonfly predator.

  3. Field hydration state varies among tropical frog species with different habitat use.

    Science.gov (United States)

    Tracy, Christopher R; Tixier, Thomas; Le Nöene, Camille; Christian, Keith A

    2014-01-01

    We have previously shown that ecological habit (e.g., arboreal, terrestrial, amphibious) correlates with thermoregulatory behaviors and water balance physiology among species of hylid frogs in northern Australia. We hypothesized that these frogs would be different with respect to their field hydration states because of the challenges associated with the different ecological habits. There are very few data on the hydration levels that frogs maintain in the field, and the existing data are from disparate species and locations and do not relate hydration state to habit or changes in seasonal water availability. We measured the hydration state of 15 species of frogs from tropical northern Australia to determine the influences of ecological habit and season on the hydration state that these frogs maintain. As predicted, frogs were significantly less hydrated in the dry season than they were in the wet season and showed significantly higher variation among individuals, suggesting that maintaining hydration is more challenging in the dry season. In the wet season, terrestrial species were significantly less hydrated than arboreal or amphibious species. During the dry season, amphibious species that sought refuge in cracking mud after the pond dried were significantly less hydrated than terrestrial or arboreal species. These data suggest that hydration behaviors and voluntary tolerance of dehydration vary with habitat use, even within closely related species in the same family or genus. Terrestrial and arboreal species might be expected to be the most vulnerable to changes in water availability, because they are somewhat removed from water sources, but the physiological characteristics of arboreal frogs that result in significant cutaneous resistance to water loss allow them to reduce the effects of their dehydrating microenvironment.

  4. A comparison of different methods to estimate species proportions by area in mixed stands

    Directory of Open Access Journals (Sweden)

    Gerald F. Dirnberger

    2014-12-01

    Full Text Available Aim of the study: This paper presents the most appropriate ways to estimate the species proportions by area in mixed stands of Norway spruce (Picea abies L. Karst. and European beech (Fagus sylvatica L. by comparing stand level and individual tree level approaches. It also investigates whether different ways of describing species proportions by area can result in different judgments on the over- or under-yielding of species in mixtures.Area of the study: Three triplets of pure and mixed stands of Norway spruce and European beech in three locations in the northeast of Austria are investigated. The three locations differ considerably in slope, bedrock and soil type as well as in site index.Material and Methods: In all 9 plots the coordinates of all trees, their dbh, height, height to the crown base and five year increment were measured. The potentially available areas of individual trees are calculated by Voronoi- diagrams and potential densities are estimated from the comparable pure stands, yield tables, and published equations for maximum basal area and Reineke’s maximum density line.Main results: The species proportions estimated by the individual tree approach with leaf area as growth characteristic gave the best fit with the stand approach with the most appropriate, regional maximum basal area equations. By using various definitions of species proportions, in the worst case the mixing effects on individual species can be seriously over- or underestimated while the mixing effects on the total increment is only negligibly affected.Research highlightsMeasures of species proportions by area are needed for comparing growth per hectare of a species in a mixed stand with that of the same species in a pure standSpecies proportions at the stand level are based on estimates of the species’ potential densities, either in terms of maximum basal area or of maximum stand density indexSpecies proportions at the tree level are derived from the area

  5. Trait differences between naturalized and invasive plant species independent of residence time and phylogeny.

    Science.gov (United States)

    Gallagher, R V; Randall, R P; Leishman, M R

    2015-04-01

    The ability to predict which alien plants will transition from naturalized to invasive prior to their introduction to novel regions is a key goal for conservation and has the potential to increase the efficacy of weed risk assessment (WRA). However, multiple factors contribute to plant invasion success (e.g., functional traits, range characteristics, residence time, phylogeny), and they all must be taken into account simultaneously in order to identify meaningful correlates of invasion success. We compiled 146 pairs of phylogenetically paired (congeneric) naturalized and invasive plant species in Australia with similar minimum residence times (i.e., time since introduction in years). These pairs were used to test for differences in 5 functional traits (flowering duration, leaf size, maximum height, specific leaf area [SLA], seed mass) and 3 characteristics of species' native ranges (biome occupancy, mean annual temperature, and rainfall breadth) between naturalized and invasive species. Invasive species, on average, had larger SLA, longer flowering periods, and were taller than their congeneric naturalized relatives. Invaders also exhibited greater tolerance for different environmental conditions in the native range, where they occupied more biomes and a wider breadth of rainfall and temperature conditions than naturalized congeners. However, neither seed mass nor leaf size differed between pairs of naturalized and invasive species. A key finding was the role of SLA in distinguishing between naturalized and invasive pairs. Species with high SLA values were typically associated with faster growth rates, more rapid turnover of leaf material, and shorter lifespans than those species with low SLA. This suite of characteristics may contribute to the ability of a species to transition from naturalized to invasive across a wide range of environmental contexts and disturbance regimes. Our findings will help in the refinement of WRA protocols, and we advocate the inclusion

  6. Structural variation and inhibitor binding in polypeptide deformylase from four different bacterial species.

    Science.gov (United States)

    Smith, Kathrine J; Petit, Chantal M; Aubart, Kelly; Smyth, Martin; McManus, Edward; Jones, Jo; Fosberry, Andrew; Lewis, Ceri; Lonetto, Michael; Christensen, Siegfried B

    2003-02-01

    Polypeptide deformylase (PDF) catalyzes the deformylation of polypeptide chains in bacteria. It is essential for bacterial cell viability and is a potential antibacterial drug target. Here, we report the crystal structures of polypeptide deformylase from four different species of bacteria: Streptococcus pneumoniae, Staphylococcus aureus, Haemophilus influenzae, and Escherichia coli. Comparison of these four structures reveals significant overall differences between the two Gram-negative species (E. coli and H. influenzae) and the two Gram-positive species (S. pneumoniae and S. aureus). Despite these differences and low overall sequence identity, the S1' pocket of PDF is well conserved among the four enzymes studied. We also describe the binding of nonpeptidic inhibitor molecules SB-485345, SB-543668, and SB-505684 to both S. pneumoniae and E. coli PDF. Comparison of these structures shows similar binding interactions with both Gram-negative and Gram-positive species. Understanding the similarities and subtle differences in active site structure between species will help to design broad-spectrum polypeptide deformylase inhibitor molecules.

  7. A simple and efficient method for isolating small RNAs from different plant species

    Directory of Open Access Journals (Sweden)

    de Folter Stefan

    2011-02-01

    Full Text Available Abstract Background Small RNAs emerged over the last decade as key regulators in diverse biological processes in eukaryotic organisms. To identify and study small RNAs, good and efficient protocols are necessary to isolate them, which sometimes may be challenging due to the composition of specific tissues of certain plant species. Here we describe a simple and efficient method to isolate small RNAs from different plant species. Results We developed a simple and efficient method to isolate small RNAs from different plant species by first comparing different total RNA extraction protocols, followed by streamlining the best one, finally resulting in a small RNA extraction method that has no need of first total RNA extraction and is not based on the commercially available TRIzol® Reagent or columns. This small RNA extraction method not only works well for plant tissues with high polysaccharide content, like cactus, agave, banana, and tomato, but also for plant species like Arabidopsis or tobacco. Furthermore, the obtained small RNA samples were successfully used in northern blot assays. Conclusion Here we provide a simple and efficient method to isolate small RNAs from different plant species, such as cactus, agave, banana, tomato, Arabidopsis, and tobacco, and the small RNAs from this simplified and low cost method is suitable for downstream handling like northern blot assays.

  8. A simple and efficient method for isolating small RNAs from different plant species.

    Science.gov (United States)

    Rosas-Cárdenas, Flor de Fátima; Durán-Figueroa, Noé; Vielle-Calzada, Jean-Philippe; Cruz-Hernández, Andrés; Marsch-Martínez, Nayelli; de Folter, Stefan

    2011-02-24

    Small RNAs emerged over the last decade as key regulators in diverse biological processes in eukaryotic organisms. To identify and study small RNAs, good and efficient protocols are necessary to isolate them, which sometimes may be challenging due to the composition of specific tissues of certain plant species. Here we describe a simple and efficient method to isolate small RNAs from different plant species. We developed a simple and efficient method to isolate small RNAs from different plant species by first comparing different total RNA extraction protocols, followed by streamlining the best one, finally resulting in a small RNA extraction method that has no need of first total RNA extraction and is not based on the commercially available TRIzol® Reagent or columns. This small RNA extraction method not only works well for plant tissues with high polysaccharide content, like cactus, agave, banana, and tomato, but also for plant species like Arabidopsis or tobacco. Furthermore, the obtained small RNA samples were successfully used in northern blot assays. Here we provide a simple and efficient method to isolate small RNAs from different plant species, such as cactus, agave, banana, tomato, Arabidopsis, and tobacco, and the small RNAs from this simplified and low cost method is suitable for downstream handling like northern blot assays.

  9. Activity of Brazilian and Bulgarian propolis against different species of Leishmania

    Directory of Open Access Journals (Sweden)

    Gérzia Maria de Carvalho Machado

    2007-02-01

    Full Text Available Extracts of propolis samples collected in Brazil and Bulgaria were assayed against four Leishmania species - Leishmania amazonensis, L. braziliensis, L. chagasi from the New World, and L. major from the Old World - associated to different clinical forms of leishmaniasis. The composition of the extracts has been previously characterized by high temperature high resolution gas chromatography coupled to mass spectrometry. Considering the chemical differences among the extracts and the behavior of the parasites, it was observed significant differences in the leishmanicidal activities with IC50/1 day values in the range of 2.8 to 229.3 µg/ml . An overall analysis showed that for all the species evaluated, Bulgarian extracts were more active than the ethanol Brazilian extract. As the assayed propolis extracts have their chemical composition determined it merits further investigation the effect of individual components or their combinations on each Leishmania species.

  10. Oviposition preferences for ethanol depend on spatial arrangement and differ dramatically among closely related Drosophila species

    Directory of Open Access Journals (Sweden)

    Matt Sumethasorn

    2016-11-01

    Full Text Available Recent work on the model fly Drosophila melanogaster has reported inconsistencies in their preference for laying eggs on intermediate concentrations of ethanol. In this study, we resolve this discrepancy by showing that this species strongly prefers ovipositing on ethanol when it is close to a non-ethanol substrate, but strongly avoids ethanol when options are farther apart. We also show fluidity of these behaviors among other Drosophila species: D. melanogaster is more responsive to ethanol than close relatives in that it prefers ethanol more than other species in the close-proximity case, but avoids ethanol more than other species in the distant case. In the close-proximity scenario, the more ethanol-tolerant species generally prefer ethanol more, with the exception of the island endemic D. santomea. This species has the lowest tolerance in the clade, but behaves like D. melanogaster. We speculate that this could be an adaptation to protect eggs from parasites or predators such as parasitoid wasps, as larvae migrate to non-toxic substrates after hatching. These natural differences among species are an excellent opportunity to study how genes and brains evolve to alter ethanol preferences, and provide an interesting model for genetic variation in preferences in other organisms, including humans.

  11. Intrinsic structural differences in the N-terminal segment of pulmonary surfactant protein SP-C from different species

    DEFF Research Database (Denmark)

    Plasencia, I; Rivas, L; Casals, C

    2001-01-01

    Predictive studies suggest that the known sequences of the N-terminal segment of surfactant protein SP-C from animal species have an intrinsic tendency to form beta-turns, but there are important differences on the probable location of these motifs in different SP-C species. Our hypothesis...... is that intrinsic structural determinants of the sequence of the N-terminal region of SP-C could define conformation, acylation and perhaps surface properties of the mature protein. To test this hypothesis we have synthesized peptides corresponding to the 13-residue N-terminal sequence of porcine and canine SP......-C, and studied their structural behaviour in solution and in phospholipid bilayers and monolayers. In these peptides, leucine at position 1 of both sequences has been replaced by tryptophan in order to allow their study by fluorescence spectroscopy. Far-u.v. circular dichroism spectra of the peptides in aqueous...

  12. Distribution of Malassezia Species in Patients with Different Dermatological Disorders and Healthy Individuals.

    Science.gov (United States)

    Prohić, Asja; Jovović Sadiković, Tamara; Kuskunović-Vlahovljak, Suada; Baljić, Rusmir

    2016-12-01

    There are differences with respect to the commonly isolated Malassezia species, not only between healthy individuals and the patients with various skin diseases, but also between different countries. We investigated the species composition of Malassezia microflora on the skin of patients with Malassezia-associated diseases and of healthy subjects (HS). Two hundred and fifty skin scrapings from patients with pityriasis versicolor (PV), seborrheic dermatitis (SD), atopic dermatitis (AD), psoriasis (PS), and healthy subjects (HS), fifty each, were inoculated into Sabouraud dextrose agar and into modified Dixon agar and identified using conventional culture-based methods. In PV and PS lesions, the most common species was M. globosa (62% and 52%, respectively), while M. restricta was predominant in SD lesions (28%). M. sympodialis was the most common species recovered from AD (52%) and healthy trunk skin (30%). Fewer cultures were positive for Malassezia growth in patients with AD than in patients with other skin conditions, and even in controls. Our data are in agreement with other studies and suggest that the pathogenic species of PV is M. globosa. The evidence that any given species is clinically important in the pathogenicity of SD, AD and PS is still lacking.

  13. Soil respiration and rates of soil carbon turnover differ among six common European tree species

    DEFF Research Database (Denmark)

    Vesterdal, Lars; Elberling, Bo; Christiansen, Jesper Riis

    2012-01-01

    moisture. Carbon turnover rates based on the ratio between R h and C stock were significantly higher in ash than in all other species except maple, and maple also had higher C turnover than spruce. A similar influence of tree species on C turnover was indicated by the litterfall C to forest floor C ratio...... and by foliar mass loss; rates of C turnover increased in the order sprucesignificant differences between several of the species. Mineral soil C turnover during laboratory incubation was highest for ash, maple and oak, and significantly lower for spruce. The indices of soil C...... turnover indices that integrated the forest floor. The results suggests that specific traits of Norway spruce and these five common broadleaf forest species should be taken into account in the modelling of soil C stock dynamics over decades....

  14. Differences in photosynthetic responses of NADP-ME type C4 species to high light.

    Science.gov (United States)

    Romanowska, Elżbieta; Buczyńska, Alicja; Wasilewska, Wioleta; Krupnik, Tomasz; Drożak, Anna; Rogowski, Paweł; Parys, Eugeniusz; Zienkiewicz, Maksymilian

    2017-03-01

    Three species chosen as representatives of NADP-ME C4 subtype exhibit different sensitivity toward photoinhibition, and great photochemical differences were found to exist between the species. These characteristics might be due to the imbalance in the excitation energy between the photosystems present in M and BS cells, and also due to that between species caused by the penetration of light inside the leaves. Such regulation in the distribution of light intensity between M and BS cells shows that co-operation between both the metabolic systems determines effective photosynthesis and reduces the harmful effects of high light on the degradation of PSII through the production of reactive oxygen species (ROS). We have investigated several physiological parameters of NADP-ME-type C4 species (e.g., Zea mays, Echinochloa crus-galli, and Digitaria sanguinalis) grown under moderate light intensity (200 µmol photons m -2  s -1 ) and, subsequently, exposed to excess light intensity (HL, 1600 µmol photons m -2  s -1 ). Our main interest was to understand why these species, grown under identical conditions, differ in their responses toward high light, and what is the physiological significance of these differences. Among the investigated species, Echinochloa crus-galli is best adapted to HL treatment. High resistance of the photosynthetic apparatus of E. crus-galli to HL was accompanied by an elevated level of phosphorylation of PSII proteins, and higher values of photochemical quenching, ATP/ADP ratio, activity of PSI and PSII complexes, as well as integrity of the thylakoid membranes. It was also shown that the non-radiative dissipation of energy in the studied plants was not dependent on carotenoid contents and, thus, other photoprotective mechanisms might have been engaged under HL stress conditions. The activity of the enzymes superoxide dismutase and ascorbate peroxidase as well as the content of malondialdehyde and H 2 O 2 suggests that antioxidant defense is not

  15. SOME PRELIMINARY DATA ABOUT VESICULAR – ARBUSCULAR MYCORRHIZAS AT DIFFERENT SPECIES OF PLANTAGO

    Directory of Open Access Journals (Sweden)

    Nicoleta IANOVICI

    2010-01-01

    Full Text Available Vesicular – arbuscular mycorrhizas are though widely distributed. Root colonization of VAM fungi was studied in seven different species of Plantago. Colonization was high among all species. The highest intensity of root cortex colonization (M%, relative arbuscular richness (A% and arbuscule richness in root fragments were found in the Plantago schwarzenbergiana. Comparison of the VAM colonization in roots from different ecosystems suggested that plants grown in the saline habitats might be more dependence on VAM. There is a suggestion that AM fungi were able to detect variations in land. There is also an indication that VAM abundance was a response to stress.

  16. Effect of prewarming the forearm on the measurement of regional cerebral blood flow with one-point venous sampling by autoradiography method

    International Nuclear Information System (INIS)

    Itoh, Youko H.; Kurabe, Teruhisa; Kazaoka, Yoshiaki; Ishiguchi, Tsuneo; Kawashima, Sadao

    2004-01-01

    Autoradiography (ARG) using 123 I-iodoamphetamine ( 123 I-IMP) is widely performed as an efficient method of measuring local cerebral blood flow. Recently, ARG by a single collection of venous blood has been appreciated as a simple method. In this study, we investigated the effect of warming of the site for collecting venous blood (forearm). The coefficient of correlation of the local cerebral blood flow value obtained from arterial and venous blood samples was 0.766 (p<0.05) in the group without warming (38 patients). The coefficient of correlation similarly obtained in the group with warming (53 patients) was 0.908 (p<0.05). The difference in the correlation efficient was significant (p<0.05) between the two groups. From these results it was concluded that warming the blood-collecting site decreased the difference between the arterial and venous radioactive concentrations and increased the precision of the test. (author)

  17. Opioid binding sites in the guinea pig and rat kidney: Radioligand homogenate binding and autoradiography

    Energy Technology Data Exchange (ETDEWEB)

    Dissanayake, V.U.; Hughes, J.; Hunter, J.C. (Parke-Davis Research Unit, Addenbrookes Hospital Site, Cambridge (England))

    1991-07-01

    The specific binding of the selective {mu}-, {delta}-, and {kappa}-opioid ligands (3H)(D-Ala2,MePhe4,Gly-ol5)enkephalin ((3H) DAGOL), (3H)(D-Pen2,D-Pen5)enkephalin ((3H)DPDPE), and (3H)U69593, respectively, to crude membranes of the guinea pig and rat whole kidney, kidney cortex, and kidney medulla was investigated. In addition, the distribution of specific 3H-opioid binding sites in the guinea pig and rat kidney was visualized by autoradiography. Homogenate binding and autoradiography demonstrated the absence of {mu}- and {kappa}-opioid binding sites in the guinea pig kidney. No opioid binding sites were demonstrable in the rat kidney. In the guinea pig whole kidney, cortex, and medulla, saturation studies demonstrated that (3H)DPDPE bound with high affinity (KD = 2.6-3.5 nM) to an apparently homogeneous population of binding sites (Bmax = 8.4-30 fmol/mg of protein). Competition studies using several opioid compounds confirmed the nature of the {delta}-opioid binding site. Autoradiography experiments demonstrated that specific (3H)DPDPE binding sites were distributed radially in regions of the inner and outer medulla and at the corticomedullary junction of the guinea pig kidney. Computer-assisted image analysis of saturation data yielded KD values (4.5-5.0 nM) that were in good agreement with those obtained from the homogenate binding studies. Further investigation of the {delta}-opioid binding site in medulla homogenates, using agonist ((3H)DPDPE) and antagonist ((3H)diprenorphine) binding in the presence of Na+, Mg2+, and nucleotides, suggested that the {delta}-opioid site is linked to a second messenger system via a GTP-binding protein. Further studies are required to establish the precise localization of the {delta} binding site in the guinea pig kidney and to determine the nature of the second messenger linked to the GTP-binding protein in the medulla.

  18. Associated clinical characteristics of patients with candidemia among different Candida species.

    Science.gov (United States)

    Chen, Liang-Yu; Kuo, Shu-Chen; Wu, Hau-Shin; Yang, Su-Pen; Chan, Yu-Jiun; Chen, Liang-Kung; Wang, Fu-Der

    2013-12-01

    The rising incidence of non-albicans Candida (NAC) infection has been associated with a potentially adverse outcome for patients with candidemia. However, categorizing various species causing candidemia into a single NAC group might lead to inappropriate conclusions due to heterogeneity in species. Thus we examined the associated factors among patients with candidemia caused by different species. This retrospective study was conducted at a tertiary medical center in Taiwan from 2006 to 2009. Mortality rate, demographic and clinical characteristics, albumin levels, and severity scores of acute illness of patients at the onset of candidemia were analyzed. A total of 447 episodes among 418 patients were included for analysis. The overall 30-day crude mortality was 48.2%, with no significant difference between C. albicans and NAC candidemia, but apparently C. parapsilosis candidemia was associated with a lower mortality rate. Time to positivity for yeast was significantly different between species. Compared with infection involving C. albicans, more frequent use of total parenteral nutrition, lower Sequential Organ Failure Assessment score and higher albumin levels were observed for C. parapsilosis candidemia. Identifying associated factors for each species may be a more effective approach than single NAC grouping. Time to positivity may be a hint for treatment guidance in candidemia. More frequent use of total parenteral nutrition and less virulent nature were noted for C. parapsilosis candidemia. Copyright © 2012. Published by Elsevier B.V.

  19. Is the Binding Pattern of Zinc(II) Equal in Different Bryophyte Species?

    Science.gov (United States)

    Sabovljević, Marko S; Weidinger, Marieluise; Sabovljević, Aneta D; Adlassnig, Wolfram; Lang, Ingeborg

    2018-02-01

    Bryophytes are usually taken as good bioindicators. However, they represent a large group of terrestrial plants and they express an enormous range of peculiarities within the plant kingdom. With the aim to search for a common pattern of zinc binding, we established axenical in vitro cultures of a dozen bryophyte species that include hornworts, thallose, and leafy liverworts, as well as acrocarp and pleurocarp mosses. The species were grown free of contaminants for many years prior to the application of different treatments, i.e. offering Zn(II) from solid and liquid media and in combination with different anions. The localization and binding of zinc was detected by confocal microscopy using the zinc-specific dye FluoZin™-3. In one of the species, Hypnum cupressiforme (which is widely used for atmospheric heavy metal deposition studies in biomonitoring), semi-quantitative analyses of zinc were performed by energy dispersive X-ray microspectrometry (EDX) in a scanning electron microscope. The results suggest no common pattern of Zn(II) binding in different bryophyte species. Instead, the binding pattern seems to be species specific. Zinc is located in certain areas or cellular compartments, as clearly shown by the EDX measurements in H. cupressiforme.

  20. Large herbivores maintain termite-caused differences in herbaceous species diversity patterns.

    Science.gov (United States)

    Okullo, Paul; Moe, Stein R

    2012-09-01

    Termites and large herbivores affect African savanna plant communities. Both functional groups are also important for nutrient redistribution across the landscape. We conducted an experiment to study how termites and large herbivores, alone and in combination, affect herbaceous species diversity patterns in an African savanna. Herbaceous vegetation on large vegetated Macrotermes mounds (with and without large herbivores) and on adjacent savanna areas (with and without large herbivores) was monitored over three years in Lake Mburo National Park, Uganda. We found substantial differences in species richness, alpha diversity, evenness, and stability between termite mound herbaceous vegetation and adjacent savanna vegetation. Within months of fencing, levels of species richness, evenness, and stability were no longer significantly different between savanna and mounds. However, fencing reduced the cumulative number of species, particularly for forbs, of which 48% of the species were lost. Fencing increased the beta diversity (dissimilarity among plots) on the resource-poor (in terms of both nutrients and soil moisture) savanna areas, while it did not significantly affect beta diversity on the resource-rich termite mounds. While termites cause substantial heterogeneity in savanna vegetation, large herbivores further amplify these differences by reducing beta diversity on the savanna areas. Large herbivores are, however, responsible for the maintenance of a large number of forbs at the landscape level. These findings suggest that the mechanisms underlying the effects of termites and large herbivores on savanna plant communities scale up to shape community structure and dynamics at a landscape level.

  1. Quantitative autoradiography of 14C-D-glucose metabolism of normal and traumatized rat brain using micro-absorption photometry

    International Nuclear Information System (INIS)

    Bonorden, S.

    1980-01-01

    It could be shown using 14 C-glucose as energy-providing substrate for brain tissue metabolism that for bolus type application a retarded and even channelling of the substrate into the metabolic process takes place. The presence of tracer in the tissue was established using autoradiography. A linear correlation between the amount of tissue-incorporated 14 C section thickness and exposure time could be established by means of densitometric measurement of brain sections of various thicknesses, by applying various 14 C-activities and by different exposure times. From these correlations direct conclusions may be made regarding the specific activity of the tissue provided that exposure time and section thickness of the sample are known. Comparative studies between cortex and narrow and between traumatized and non-traumatized brain tissue show that the rate of metabolism in brain cortex is markedly higher than in the marrow and that 14 C-incorporation is higher in traumatized tissue than in non-traumatized tissue. Whilst the difference in rate of metabolism between brain cortex and marrow can be clearly related to the differing cell count/unit surface area for cortex and marrow, the different energy conversion rates for functionally damaged and normal brain tissue is a specific characteristic of injury. Apart from the fact that an increased 14 C-deposition is in no way indicative of an increased metabolic activity, the possibility of quantifying 14 C-tissue content provides a basis for estimating therapeutic effects e.g. in the treatment of trauma-caused brain edema. (orig.) [de

  2. Wolbachia Has Two Different Localization Patterns in Whitefly Bemisia tabaci AsiaII7 Species.

    Science.gov (United States)

    Shi, Peiqiong; He, Zhan; Li, Shaojian; An, Xuan; Lv, Ning; Ghanim, Murad; Cuthbertson, Andrew G S; Ren, Shun-Xiang; Qiu, Bao-Li

    2016-01-01

    The whitefly Bemisia tabaci is a cosmopolitan insect species complex that harbors the obligate primary symbiont Portiera aleyrodidarum and several facultative secondary symbionts including Wolbachia, which have diverse influences on the host biology. Here, for the first time, we revealed two different localization patterns of Wolbachia present in the immature and adult stages of B. tabaci AsiaII7 cryptic species. In the confined pattern, Wolbachia was restricted to the bacteriocytes, while in the scattered pattern Wolbachia localized in the bacteriocytes, haemolymph and other organs simultaneously. Our results further indicated that, the proportion of B. tabaci AsiaII7 individuals with scattered Wolbachia were significantly lower than that of confined Wolbachia, and the distribution patterns of Wolbachia were not associated with the developmental stage or sex of whitefly host. This study will provide a new insight into the various transmission routes of Wolbachia in different whitefly species.

  3. Comparative study of infection with Tetrahymena of different ornamental fish species

    DEFF Research Database (Denmark)

    Sharon, G.; Leibowitz, M. Pimenta; Chettri, Jiwan Kumar

    2014-01-01

    Tetrahymena is a ciliated protozoan that can infect a wide range of fish species, although it is most commonly reported in guppies (Poecilia reticulata). The aim of this study was to compare the susceptibility to infection with Tetrahymena of five different ornamental fish species from two...... different super orders. The species examined were platy (Xiphophorus), molly (Poecilia sphenops) and angelfish (Pterophyllum scalare) of the Acanthopterygii super order (which also includes guppies) and goldfish (Carassius auratus auratus) and koi carp (Cyprinus carpio) of the Ostariophysi super order...... of the Acanthopterygii super order. Guppies were the most susceptible to Tetrahymena infection, exhibiting a mortality rate of 87% and 100% in two separate experiments. A high mortality rate was also observed in platy (77%), while that of molly and angelfish was significantly lower (23% and 33%, respectively). Goldfish...

  4. Comparative transcriptomics and proteomics of three different aphid species identifies core and diverse effector sets.

    Science.gov (United States)

    Thorpe, Peter; Cock, Peter J A; Bos, Jorunn

    2016-03-02

    Aphids are phloem-feeding insects that cause significant economic losses to agriculture worldwide. While feeding and probing these insects deliver molecules, called effectors, inside their host to enable infestation. The identification and characterization of these effectors from different species that vary in their host range is an important step in understanding the infestation success of aphids and aphid host range variation. This study employs a multi-disciplinary approach based on transcriptome sequencing and proteomics to identify and compare effector candidates from the broad host range aphid Myzus persicae (green peach aphid) (genotypes O, J and F), and narrow host range aphids Myzus cerasi (black cherry aphid) and Rhopalosiphum padi (bird-cherry oat aphid). Using a combination of aphid transcriptome sequencing on libraries derived from head versus body tissues as well as saliva proteomics we were able to predict candidate effectors repertoires from the different aphid species and genotypes. Among the identified conserved or core effector sets, we identified a significant number of previously identified aphid candidate effectors indicating these proteins may be involved in general infestation strategies. Moreover, we identified aphid candidate effector sequences that were specific to one species, which are interesting candidates for further validation and characterization with regards to species-specific functions during infestation. We assessed our candidate effector repertoires for evidence of positive selection, and identified 49 candidates with DN/DS ratios >1. We noted higher rates of DN/DS ratios in predicted aphid effectors than non-effectors. Whether this reflects positive selection due to co-evolution with host plants, or increased neofunctionalization upon gene duplication remains to be investigated. Our work provides a comprehensive overview of the candidate effector repertoires from three different aphid species with varying host ranges

  5. Species differences in brain gene expression profiles associated with adult behavioral maturation in honey bees

    Directory of Open Access Journals (Sweden)

    Robinson Gene E

    2007-06-01

    Full Text Available Abstract Background Honey bees are known for several striking social behaviors, including a complex pattern of behavioral maturation that gives rise to an age-related colony division of labor and a symbolic dance language, by which successful foragers communicate the location of attractive food sources to their nestmates. Our understanding of honey bees is mostly based on studies of the Western honey bee, Apis mellifera, even though there are 9–10 other members of genus Apis, showing interesting variations in social behavior relative to A. mellifera. To facilitate future in-depth genomic and molecular level comparisons of behavior across the genus, we performed a microarray analysis of brain gene expression for A. mellifera and three key species found in Asia, A. cerana, A. florea and A. dorsata. Results For each species we compared brain gene expression patterns between foragers and adult one-day-old bees on an A. mellifera cDNA microarray and calculated within-species gene expression ratios to facilitate cross-species analysis. The number of cDNA spots showing hybridization fluorescence intensities above the experimental threshold was reduced by an average of 16% in the Asian species compared to A. mellifera, but an average of 71% of genes on the microarray were available for analysis. Brain gene expression profiles between foragers and one-day-olds showed differences that are consistent with a previous study on A. mellifera and were comparable across species. Although 1772 genes showed significant differences in expression between foragers and one-day-olds, only 218 genes showed differences in forager/one-day-old expression between species (p Conclusion We conclude that the A. mellifera cDNA microarray can be used effectively for cross-species comparisons within the genus. Our results indicate that there is a widespread conservation of the molecular processes in the honey bee brain underlying behavioral maturation. Species differences in

  6. Autoradiography of the bacterial colony. Application to the effects of polymyxin on the colony of Ps. aeruginosa

    International Nuclear Information System (INIS)

    Reyrolle, Jean; Letellier, Francois; Kauffmann, Jacques

    1975-01-01

    The autoradiography of a colony of Ps.a. which has been transferred, during growth, on a medium added with polymyxin and tritiate leucin makes it possible to locate an upper zone with a high metabolic activity and a basal zone with no metabolic activity. The latter, which consist of lysed cells, acts probably as a selective filter against the drug [fr

  7. Functional morphology underlies performance differences among invasive and non-invasive ruderal Rubus species.

    Science.gov (United States)

    Caplan, Joshua S; Yeakley, J Alan

    2013-10-01

    The ability of some introduced plant species to outperform native species under altered resource conditions makes them highly productive in ecosystems with surplus resources. However, ruderal native species are also productive when resources are available. The differences in abundance among invasive and non-invasive ruderal plants may be related to differences in ability to maintain access to or store resources for continual use. For a group of ruderal species in the Pacific Northwest of North America (invasive Rubus armeniacus; non-invasive R. ursinus, R. parviflorus, R. spectabilis, and Rosa nutkana), we sought to determine whether differences in functional morphological traits, especially metrics of water access and storage, were consistent with differences in water conductance and growth rate. We also investigated the changes in these traits in response to abundant vs. limited water availability. Rubus armeniacus had among the largest root systems and cane cross-sectional areas, the lowest cane tissue densities, and the most plastic ratios of leaf area to plant mass and of xylem area to leaf area, often sharing its rank with R. ursinus or Rosa nutkana. These three species had the highest water conductance and relative growth rates, though Rubus armeniacus grew the most rapidly when water was not limited. Our results suggest that water access and storage abilities vary with morphology among the ruderal species investigated, and that these abilities, in combination, are greatest in the invasive. In turn, functional morphological traits allow R. armeniacus to maintain rapid gas exchange rates during the dry summers in its invaded range, conferring on it high productivity.

  8. Hidden biodiversity in an ecologically important freshwater amphipod: differences in genetic structure between two cryptic species.

    Directory of Open Access Journals (Sweden)

    Anja Marie Westram

    Full Text Available Cryptic species, i.e. species that are morphologically hard to distinguish, have been detected repeatedly in various taxa and ecosystems. In order to evaluate the importance of this finding, we have to know in how far cryptic species differ in various aspects of their biology. The amphipod Gammarus fossarum is a key invertebrate in freshwater streams and contains several cryptic species. We examined the population genetic structure, genetic diversity and demographic history of two of them (type A and type B using microsatellite markers and asked whether they show significant differences. We present results of population genetic analyses based on a total of 37 populations from the headwaters of two major European drainages, Rhine and Rhone. We found that, in both species, genetic diversity was geographically structured among and within drainages. For type A in the Rhine and type B in the Rhone, we detected significant patterns of isolation by distance. The increase of genetic differentiation with geographical distance, however, was much higher in type A than in type B. This result indicates substantial interspecific differences in population history and/or the extent of current gene flow between populations. In the Rhine, type B does not show evidence of isolation by distance, and population differentiation is relatively low across hundreds of kilometres. The majority of these populations also show signatures of recent bottlenecks. These patterns are consistent with a recent expansion of type B into the Rhine drainage. In summary, our results suggest considerable and previously unrecognized interspecific differences in the genetic structure of these cryptic keystone species.

  9. Species richness and relative species abundance of Nymphalidae (Lepidoptera) in three forests with different perturbations in the North-Central Caribbean of Costa Rica.

    Science.gov (United States)

    Stephen, Carolyn; Sánchez, Ragde

    2014-09-01

    Measurements of species richness and species abundance can have important implications for regulations and conservation. This study investigated species richness and abundance of butterflies in the family Nymphalidae at undisturbed, and disturbed habitats in Tirimbina Biological Reserve and Nogal Private Reserve, Sarapiquí, Costa Rica. Traps baited with rotten banana were placed in the canopy and the understory of three habitats: within mature forest, at a river/forest border, and at a banana plantation/forest border. In total, 71 species and 487 individuals were caught and identified during May and June 2011 and May 2013. Species richness and species abundance were found to increase significantly at perturbed habitats (p < 0.0001, p < 0.0001, respectively). The edge effect, in which species richness and abundance increase due to greater complementary resources from different habitats, could be one possible explanation for increased species richness and abundance.

  10. Quantitative autoradiography measurement of CA-MoV18 antigen concentration in ovarian carcinomas

    International Nuclear Information System (INIS)

    Li Peiyong; Vecchio, S. Del; Lastoria, S.; Colnaghi, MI.; Salvatore, M.

    1995-01-01

    Concentrations of CA-MoV18 antigen in ovarian tumor and normal ovarian tissue samples were measured. Quantitative autoradiography was performed in 33 ovarian tissue samples with radiolabeled MoV18 monoclonal antibodies. Among them 22 samples were ovarian carcinomas, 7 samples were benign ovarian tumors and 4 samples were normal ovarian tissues. Among 19 serous ovarian carcinomas, 17 had MoV 18 antigen expression, ranging from 1.30 to 59.28 pmol/g tissue, 3 mutinous ovarian carcinomas and 11 nonmalignant ovaries (7 benign tumors and 4 normal tissues) were not detectable MoV 18 antigen. CA-MoV18 antigen was expressed in serous ovarian carcinomas. The concentration of CA-MoV 18 antigen was correlated with labelled antibodies (%ID/g) in tumor tissue

  11. Whole-body autoradiography of 63Ni in mice throughout gestation

    International Nuclear Information System (INIS)

    Olsen, I.; Jonsen, J.

    1979-01-01

    Whole-body autoradiography was used to study nickel uptake and retention in mice throughout gestation. After an intraperitoneal injection of 50μCi 63 NiCl 2 into a 16-day-pregnant mouse, nickel appeared rapidly in connective tissues. Prominent sites of radioactivity 72 h after injection included the visceral yolk sac, lung, gastrointestinal tract and kidney. Nickel crossed the placental barriers throughout gestation, i.e. the visceral yolk sac during early gestation, the visceral yolk sac and chorioallantoic placenta during late gestation. A marked uptake of nickel was seen already in the 5-and 6-day embryo. Fetal accumulation of nickel took place up to 16 days gestation. Whereas nickel was distributed throughout the early embryo, distribution became more differentiated with increasing gestation, imitating that in the mother. Penetration of nickel into the mouse conceptus makes possible a similar ability in the human conceptus. (author)

  12. Differences in insect resistance between tomato species endemic to the Galapagos Islands.

    Science.gov (United States)

    Lucatti, Alejandro F; van Heusden, Adriaan W; de Vos, Ric C H; Visser, Richard G F; Vosman, Ben

    2013-08-24

    The Galapagos Islands constitute a highly diverse ecosystem and a unique source of variation in the form of endemic species. There are two endemic tomato species, Solanum galapagense and S. cheesmaniae and two introduced tomato species, S. pimpinellifolium and S. lycopersicum. Morphologically the two endemic tomato species of the Galapagos Islands are clearly distinct, but molecular marker analysis showed no clear separation. Tomatoes on the Galapagos are affected by both native and exotic herbivores. Bemisia tabaci is an important introduced insect species that feeds on a wide range of plants. In this article, we address the question whether the differentiation between S. galapagense and S. cheesmaniae may be related to differences in susceptibility towards phloem-feeders and used B. tabaci as a model to evaluate this. We have characterized 12 accessions of S. galapagense, 22 of S. cheesmaniae, and one of S. lycopersicum as reference for whitefly resistance using no-choice experiments. Whitefly resistance was found in S. galapagense only and was associated with the presence of relatively high levels of acyl sugars and the presence of glandular trichomes of type I and IV. Genetic fingerprinting using 3316 SNP markers did not show a clear differentiation between the two endemic species. Acyl sugar accumulation as well as the climatic and geographical conditions at the collection sites of the accessions did not follow the morphological species boundaries. Our results suggest that S. galapagense and S. cheesmaniae might be morphotypes rather than two species and that their co-existence is likely the result of selective pressure.

  13. Bacterial Diversity and Community Structure in Two Bornean Nepenthes Species with Differences in Nitrogen Acquisition Strategies.

    Science.gov (United States)

    Sickel, Wiebke; Grafe, T Ulmar; Meuche, Ivonne; Steffan-Dewenter, Ingolf; Keller, Alexander

    2016-05-01

    Carnivorous plants of the genus Nepenthes have been studied for over a century, but surprisingly little is known about associations with microorganisms. The two species Nepenthes rafflesiana and Nepenthes hemsleyana differ in their pitcher-mediated nutrient sources, sequestering nitrogen from arthropod prey and arthropods as well as bat faeces, respectively. We expected bacterial communities living in the pitchers to resemble this diet difference. Samples were taken from different parts of the pitchers (leaf, peristome, inside, outside, digestive fluid) of both species. Bacterial communities were determined using culture-independent high-throughput amplicon sequencing. Bacterial richness and community structure were similar in leaves, peristomes, inside and outside walls of both plant species. Regarding digestive fluids, bacterial richness was higher in N. hemsleyana than in N. rafflesiana. Additionally, digestive fluid communities were highly variable in structure, with strain-specific differences in community composition between replicates. Acidophilic taxa were mostly of low abundance, except the genus Acidocella, which strikingly reached extremely high levels in two N. rafflesiana fluids. In N. hemsleyana fluid, some taxa classified as vertebrate gut symbionts as well as saprophytes were enriched compared to N. rafflesiana, with saprophytes constituting potential competitors for nutrients. The high variation in community structure might be caused by a number of biotic and abiotic factors. Nitrogen-fixing bacteria were present in both study species, which might provide essential nutrients to the plant at times of low prey capture and/or rare encounters with bats.

  14. Invasive ecosystem engineer selects for different phenotypes of an associated native species.

    Science.gov (United States)

    Wright, Jeffrey T; Gribben, Paul E; Byers, James E; Monro, Keyne

    2012-06-01

    Invasive habitat-forming ecosystem engineers modify the abiotic environment and thus represent a major perturbation to many ecosystems. Because native species often persist in these invaded habitats but have no shared history with the ecosystem engineer, the engineer may impose novel selective pressure on native species. In this study, we used a phenotypic selection framework to determine whether an invasive habitat-forming ecosystem engineer (the seaweed Caulerpa taxifolia) selects for different phenotypes of a common co-occurring native species (the bivalve Anadara trapezia). Compared to unvegetated habitat, Caulerpa habitat has lower water flow, lower dissolved oxygen, and sediments are more silty and anoxic. We determined the performance consequences of variation in key functional traits that may be affected by these abiotic changes (shell morphology, gill mass, and palp mass) for Anadara transplanted into Caulerpa and unvegetated habitat. Both linear and nonlinear performance gradients in Anadara differed between habitats, and these gradients were stronger in Caulerpa compared to unvegetated sediment. Moreover, in Caulerpa alternate phenotypes performed well, and these phenotypes were different from the dominant phenotype in unvegetated sediment. By demonstrating that phenotype-performance gradients differ between habitats, we have highlighted a role for Caulerpa as an agent of selection on native species.

  15. Bioactivation of morphine-3-propionate, a prodrug of morphine, in tissues from different species

    DEFF Research Database (Denmark)

    Groth, L.; Jørgensen, A.; Steffansen, B.

    1997-01-01

    The bioactivation of the morphine prodrug, morphine-3-propionate, has been evaluated by determination of the first-order hydrolysis rate in different tissue homogenates and blood fractions from various mammal species, including man. The hydrolysis rates were determined in whole blood, serum...

  16. Gender and Species Differences in Triadimefon Metabolism by Rodent Hepatic Microsomes

    Science.gov (United States)

    Understanding the potential differences in metabolic capacity and kinetics between various common laboratory species as well as between genders is an important facet of chemical risk assessment that is often overlooked, particularly for chemicals which undergo non-cytochrome P450...

  17. Root system topology and diameter distribution of species from habitats differing in inundation frequency

    NARCIS (Netherlands)

    Bouma, T.J.; Nielsen, K.F.; Van Hal, J.; Koutstaal, B.P.

    2001-01-01

    1. We compared the root systems of seven halophytic species that occur at different elevations on a salt marsh, in order to (i) test the hypothesis that variations in root system architecture reflect adaptation to inundation frequency or nitrogen limitation, and (ii) verify the theoretically

  18. Can commonly measurable traits explain differences in metal accumulation and toxicity in earthworm species?

    NARCIS (Netherlands)

    Qiu, H.; Peijnenburg, W.J.G.M.; van Gestel, C.A.M.; Vijver, M.G.

    2014-01-01

    There is no clear consensus in the literature on the metal accumulation pattern and sensitivity of different earthworm species. In the present study, accumulation and toxicity of Cu, Cd, Ni, and Zn in the earthworms Lumbricus rubellus (epigeic), Aporrectodea longa (anecic), and Eisenia fetida

  19. Co-occurring species differ in tree-ring δ18O trends.

    Science.gov (United States)

    John D. Marshall; Robert A. Monserud

    2006-01-01

    The stable oxygen isotope ratio (δ18O) of tree-ring cellulose is jointly determined by the δ18O of xylem water, the δ18O of atmospheric water vapor, the humidity of the atmosphere and perhaps by species-specific differences in leaf structure and function. Atmospheric...

  20. Functional differences between native and alien species : a global-scale comparison

    NARCIS (Netherlands)

    Ordonez, Alejandro; Wright, Ian J.; Olff, Han; Kitajima, Kaoru

    2010-01-01

    1. A prevalent question in the study of plant invasions has been whether or not invasions can be explained on the basis of traits. Despite many attempts, a synthetic view of multi-trait differences between alien and native species is not yet available. 2. We compiled a database of three ecologically

  1. Effects of different dispersal patterns on the presence-absence of multiple species

    Science.gov (United States)

    Mohd, Mohd Hafiz; Murray, Rua; Plank, Michael J.; Godsoe, William

    2018-03-01

    Predicting which species will be present (or absent) across a geographical region remains one of the key problems in ecology. Numerous studies have suggested several ecological factors that can determine species presence-absence: environmental factors (i.e. abiotic environments), interactions among species (i.e. biotic interactions) and dispersal process. While various ecological factors have been considered, less attention has been given to the problem of understanding how different dispersal patterns, in interaction with other factors, shape community assembly in the presence of priority effects (i.e. where relative initial abundances determine the long-term presence-absence of each species). By employing both local and non-local dispersal models, we investigate the consequences of different dispersal patterns on the occurrence of priority effects and coexistence in multi-species communities. In the case of non-local, but short-range dispersal, we observe agreement with the predictions of local models for weak and medium dispersal strength, but disagreement for relatively strong dispersal levels. Our analysis shows the existence of a threshold value in dispersal strength (i.e. saddle-node bifurcation) above which priority effects disappear. These results also reveal a co-dimension 2 point, corresponding to a degenerate transcritical bifurcation: at this point, the transcritical bifurcation changes from subcritical to supercritical with corresponding creation of a saddle-node bifurcation curve. We observe further contrasting effects of non-local dispersal as dispersal distance changes: while very long-range dispersal can lead to species extinctions, intermediate-range dispersal can permit more outcomes with multi-species coexistence than short-range dispersal (or purely local dispersal). Overall, our results show that priority effects are more pronounced in the non-local dispersal models than in the local dispersal models. Taken together, our findings highlight

  2. Bats from Fazenda Intervales, Southeastern Brazil: species account and comparison between different sampling methods

    Directory of Open Access Journals (Sweden)

    Christine V. Portfors

    2000-06-01

    Full Text Available Assessing the composition of an area's bat fauna is typically accomplished by using captures or by monitoring echolocation calls with bat detectors. The two methods may not provide the same data regarding species composition. Mist nets and harp traps may be biased towards sampling low flying species, and bat detectors biased towards detecting high intensity echolocators. A comparison of the bat fauna of Fazenda Intervales, southeastern Brazil, as revealed by mist nets and harp trap captures, checking roosts and by monitoring echolocation calls of flying bats illustrates this point. A total of 17 species of bats was sampled. Fourteen bat species were captured and the echolocation calls of 12 species were recorded, three of them not revealed by mist nets or harp traps. The different sampling methods provided different pictures of the bat fauna. Phyllostomid bats dominated the catches in mist nets, but in the field their echolocation calls were never detected. No single sampling approach provided a complete assessment of the bat fauna in the study area. In general, bats producing low intensity echolocation calls, such as phyllostomids, are more easily assessed by netting, and bats producing high intensity echolocation calls are better surveyed by bat detectors. The results demonstrate that a combined and varied approach to sampling is required for a complete assessment of the bat fauna of an area.

  3. Initial growth of six forest tree species in differents spacing conditions

    Directory of Open Access Journals (Sweden)

    Daniel Ferreira do Nascimento

    2012-03-01

    Full Text Available This work veriflied the influence of planting spacing on the initial growth of six forest species, at the age of 22 months, in plantations of forest recomposition in the Guandu River Basin. The experiment was installed in the SFE - thermoelectric power plants Barbosa Lima Sobrinho, located in the City of Seropédica-RJ. Forty eight tree species were planted, using the spacings, 1.0 x 1.0, 1.5 x 1.5, 2.0 and 2.0 x 3.0 x 2.0 m, which are the study treatments. At 22 months after planting, it was evaluated the growth in height, diameter at ground level (DNS and area of the canopy for the species, Anadenanthera macrocarpa Benth. Brenan (angico vermelho, Schinus terebinthifolius Raddi (aroeira pimenteira, Schizolobium parahyba Blake (guapuruvu Chorisia speciosa St. Hill (paineira, Cordia sp. (babosa branca and Inga marginata (ingá. It was found that the studied species behaved in a different way in the differents spacing of planting, and that the planting density significantly influenced on the initial growth of all the species. In general, in wider planting spacings, the plants had higher growth.

  4. Stem profile description in plantations for different species using artificial neural network

    Directory of Open Access Journals (Sweden)

    Bráulio Pizziôlo Furtado Campos

    2017-06-01

    Full Text Available The objective of this study was to analyze the ability of an artificial neural network (ANN to describe the stem profile of trees of different genera and species in different growing conditions. For comparative purposes, equations were fit, using regression analysis to describe the stem profile. For neural network as well as for the regression equations, evaluation of accuracy was based on correlation coefficient between observed and estimated diameters along the stem, square root of the mean square percentage error (RMSE and graphical analysis. Artificial intelligence methods, especially ANN, can be effective in describing trees bole profile of different species in different growth conditions using only one ANN with similar efficiency as regression models traditionally employed by forestry companies.

  5. Laboratory LiF characterization of different phytoplankton species originating harmful blooms

    Energy Technology Data Exchange (ETDEWEB)

    Barbini, R.; Colao, F.; Fantoni, R.; Palucci, A.; Ribezzo, S. [ENEA, Centro Ricerche Frascati, Rome (Italy). Dip. Innovazione; Micheli, C. [ENEA, Centro Ricerche Casaccia, Rome (Italy). Dipt. Innovazione

    1997-11-01

    A systematic laboratory characterization of different phytoplankton cultures has been performed in combination with LiF (Laser Induced Fluorescence) measurements aimed to investigate the possibility of their remote monitoring by means of lidar fluoro sensor systems. Cultures of microalgae characterized by different pigment contents have been analyzed in the visible region upon UV laser excitation. High resolution laboratory spectra have been measured in order to obtain the fingerprint of each species. Emission wavelength related to the main pigments contribution have been identified. Detection limits of the emitted red chlorophyll signal have been evaluated for the different species after dilution in the culture medium and in real sea water. Prior to the LiF excitation aimed to the remote characterization the algal cultures were morphologically analyzed by fluorescence and scanning electron microscopy. Furthermore the relevant cell number was counted for biomass estimation, and the chlorophylls content was determined by different chemical methods.

  6. Demonstration of lactogenic receptors in rat endocrine pancreases by quantitative autoradiography

    International Nuclear Information System (INIS)

    Polak, M.; Scharfmann, R.; Ban, E.; Haour, F.; Postel-Vinay, M.C.; Czernichow, P.

    1990-01-01

    A direct effect of growth hormone and/or prolactin on the growth of the pancreatic beta-cell has been proposed. This study assessed the presence of human growth hormone (hGH)-binding sites in male adult rat endocrine pancreas via quantitative autoradiography. The binding of 125I-labeled hGH was evaluated by receptor autoradiography on frozen-pancreas cryostat cut sections. The sections were incubated with 125I-hGH (10(-10) M) for 75 min at room temperature, and nonspecific binding was determined in the presence of excess native hGH (5 X 10(-7) M). The specificity of the binding was assessed in competition experiments with bovine GH and ovine prolactin. The autoradiograms were quantified with a computer-assisted image-processing system. The sections were then stained to visualize the endocrine islets. Nondiabetic control and streptozocin (STZ)-injected rats were used. Our results show that (1) there is specific binding of iodinated hGH in small areas of the pancreas, which appear as the Langerhans islets when the autoradiogram and the stained sections are superimposed; (2) the specificity of hGH binding in rat islets is lactogenic; (3) the density of the hGH-binding sites in the endocrine pancreas is estimated at 4.8 fmol/mg protein, with IC50 ranging from 0.98 to 2.50 nM; and (4) binding sites may be present on the beta-cell, because specific binding disappears in STZ-injected rats. In conclusion, by use of a quantitative autoradiographic technique, we provide evidence for the presence of lactogenic receptors on rat beta-cells

  7. Image guided interstitial laser thermotherapy: a canine model evaluated by magnetic resonance imaging and quantitative autoradiography.

    Science.gov (United States)

    Muacevic, A; Peller, M; Ruprecht, L; Berg, D; Fend, L; Sroka, R; Reulen, H J; Reiser, M; Tonn, J Ch; Kreth, F W

    2005-02-01

    To determine the applicability and safety of a new canine model suitable for correlative magnetic resonance imaging (MRI) studies and morphological/pathophysiological examination over time after interstitial laser thermotherapy (ILTT) in brain tissue. A laser fibre (Diode Laser 830 nm) with an integrated temperature feedback system was inserted into the right frontal white matter in 18 dogs using frameless navigation technique. MRI thermometry (phase mapping i.e. chemical shift of the proton resonance frequency) during interstitial heating was compared to simultaneously recorded interstitial fiberoptic temperature readings on the border of the lesion. To study brain capillary function in response to ILTT over time quantitative autoradiography was performed investigating the unidirectional blood-to-tissue transport of carbon-14-labelled alpha amino-isobutyric acid (transfer constant K of AIB) 12, 36 hours, 7, 14 days, 4 weeks and 3 months after ILTT. All laser procedures were well tolerated, laser and temperature fibres could be adequately placed in the right frontal lobe in all animals. In 5 animals MRI-based temperature quantification correlated strongly to invasive temperature measurements. In the remaining animals the temperature fibre was located in the area of susceptibility artifacts, therefore, no temperature correlation was possible. The laser lesions consisted of a central area of calcified necrosis which was surrounded by an area of reactive brain tissue with increased permeability. Quantitative autoradiography indicated a thin and spherical blood brain barrier lesion. The magnitude of K of AIB increased from 12 hours to 14 days after ILTT and decreased thereafter. The mean value of K of AIB was 19 times (2 times) that of normal white matter (cortex), respectively. ILTT causes transient, highly localised areas of increased capillary permeability surrounding the laser lesion. Phase contrast imaging for MRI thermomonitoring can currently not be used for

  8. Sites of reactive oxygen species generation by mitochondria oxidizing different substrates

    DEFF Research Database (Denmark)

    Quinlan, Casey L; Perevoshchikova, IrinaV; Hey-Mogensen, Martin

    2013-01-01

    Mitochondrial radical production is important in redox signaling, aging and disease, but the relative contributions of different production sites are poorly understood. We analyzed the rates of superoxide/H2O2 production from different defined sites in rat skeletal muscle mitochondria oxidizing...... of specific sites to the production of reactive oxygen species in isolated mitochondria depend very strongly on the substrates being oxidized, and the same is likely true in cells and in vivo....

  9. Patterns of plant species diversity during succession under different disturbance regimes.

    Science.gov (United States)

    Denslow, Julie Sloan

    1980-07-01

    I suggest that between-community variations in diversity patterns during succession in plant communities are due to the effects of selection on life history strategies under different disturbance regimes. Natural disturbances to plant communities are simultaneously a source of mortality for some individuals and a source of establishment sites for others. The plant community consists of a mosaic of disturbance patches (gaps) of different environmental conditions. The composition of the mosaic is described by the size-frequency distribution of the gaps and is dependent on the rates and scales of disturbance. The life-history strategies of plant species dependent on some form of disturbance for establishment of propagules should reflect this size-frequency distribution of disturbance patches. An extension of island biogeographic theory to encompass relative habitat area predicts that a community should be most rich in species adapted to growth and establishment in the spatially most common patch types. Changes in species diversity during succession following large scale disturbance reflect the prevalent life history patterns under historically common disturbance regimes. Communities in which the greatest patch area is in large-scale clearings (e.g. following fire) are most diverse in species establishing seedlings in xeric, high light conditions. Species diversity decreases during succession. Communities in which such large patches are rare are characterized by a large number of species that reach the canopy through small gaps and realtively few which regenerate in the large clearings. Diversity increases during succession following a large scale disturbance.Evidence from communities characterized by different disturbance regimes is summarized from the literature. This hypothesis provides an evolutionary mechanism with which to examine the changes in plant community structure during succession. Diversity peaks occurring at "intermediate levels" of disturbance as

  10. Solid phases and solution species of different elements in geologic environments

    Energy Technology Data Exchange (ETDEWEB)

    Rai, D.; Serne, R.J.

    1978-03-01

    An investigation was conducted to predict from thermodynamic data the nature of the solid phases and solution species in various weathering environments of different elements (Am, Sb, Ce, Cs, Co, Cm, Eu, I, Np, Pu, Pm, Ra, Ru, Sr, Tc, T, U, and Zr) that are present in radioactive wastes, to predict the degree of adsorption of different elements by the solid matrices and to compare these predictions with observed results, and to determine the influence of different factors (such as Ph, Eh, complexing ligands) on total pore-water concentration and the nature of solution species of selected elements. Based on the nature of the predominant solution species, qualitative predictions regarding the adsorption and movement of various elements can be made. Soils and sediments mainly show cation exchange capacities (since these materials carry a large net negative charge) and to a limited extent, anion exchange capacities. Thus, most cations migrate through the soil or rock column at speeds slower than the groundwater. Relative to each other, the trivalent cations generally move the slowest, the divalent cations at intermediate velocities and the monovalent cations most rapidly. Tritium is unique in that it readily substitutes for hydrogen in water and migrates, therefore, at the same velocity as water. The simple anions tend to migrate through soils and rocks with little reaction because usually a pH of less than 4 is required to activate a significant soil anion exchange capacity. The migration and retention of inorganic complex species (mononuclear and polynuclear) would also be dependent upon the charge and size of the species. The behavior of organic complexed species of elements is difficult to predict because of the lack of knowledge regarding the exact nature of the organic ligands, a wide variation in amounts and types of organic ligands, and the size and solubility of these organics.

  11. [Comparison of antimicrobial resistance pattern of selected respiratory tract pathogens isolated from different animal species].

    Science.gov (United States)

    Wettstein, K; Frey, J

    2004-09-01

    The antibiotic resistance pattern of respiratory tract pathogens isolated of different animal species suffering from respiratory tract diseases has been investigated by antibiograms performed by agar diffusion test. The results show that the resistance situation in Switzerland is favourable compared with studies from other countries. However, high resistance rates were found in certain species: 61% of Streptococcus spp. were resistant to erythromycin and 44% to tetracycline, 59% of Bordetella bronchiseptica were resistant to ampicillin and 50% of Mannheimia (Pasteurella) haemolytica were multiresistant to tetracycline, ampicillin and streptomycine. The gram negative isolates were widely resistant to streptomycine.

  12. The effect of wood extractives on the thermal stability of different wood species

    Energy Technology Data Exchange (ETDEWEB)

    Shebani, A.N.; Reenen, A.J. van [Department of Chemistry and Polymer Science, University of Stellenbosch, Private Bag X1, Matieland 7602 (South Africa); Meincken, M. [Department of Forest and Wood Science, University of Stellenbosch, Private Bag X1, Matieland 7602 (South Africa)], E-mail: mmein@sun.ac.za

    2008-05-30

    This study compares the thermal stability of different wood species, which is an important factor for the production of wood-polymer composites (WPCs), and investigates the effect of extraction on thermal properties. The chemical composition of four wood species -Quercus alba, Pinus radiata, Eucalyptus grandis and Acacia cyclops - has been determined, as the species is expected to affect the thermal stability of wood. Subsequently, the hot-water (HW) extractives, ethanol/cyclohexane (E/C) extractives and both extractives were eliminated from the wood via Soxhlet extraction and the thermal stability of the wood determined with thermogravimetric analysis (TGA) under identical conditions. The results suggest that a higher cellulose and lignin content leads to better thermal stability of wood in different temperature regimes. In all cases, the removal of extractives improved the thermal stability of the wood. The effect of combined extractions was more pronounced than of an individual extraction and E/C-extraction caused less improvement in the thermal stability of wood than HW extraction. The degradation of the investigated wood extractives occurred at low rates over a broad temperature range. Pure cellulose exhibited superior thermal stability compared to wood, but differences were observed between the investigated wood species.

  13. Species diversity of phytoseiid mites on different ecosystems in Sari district

    Directory of Open Access Journals (Sweden)

    Javad Omidi

    2016-03-01

    Full Text Available Introduction Mites of the Phytoseiidae family have been extensively studied as biological control agents of different mites and insect pests. Some species also feed on nematodes, fungal spores, pollen and exudates from plants and insects. About 2,300 phytoseiid species belonging to 90 genera have been described in this family (Chant and McMurtry 2007. Considerable efforts have been made in recent years to the collection and identification of the predaceous phytoseiid mites in Iran (Rahmani et al. 2010. Despite some studies on phytoseiid mites in Iran, our knowledge remains limited about their fauna and diversity in Mazandaran province. The data of these studies showed that until recently, only 75 species were reported from Iran. The objective of this study was to evaluate the species diversity of Phytoseiidae and access to effective predatory mites for biological control of injurious mite pests in Sari, the center of Mazandaran province (Southern coast of the Caspian Sea, 35 ° 47'-36 ° 35' N, 50 ° 34'-54 ° 10' E Materials and methods Samples were taken from 80 plant species belonging to 46 plant families including forest trees, orchards and farm crops representing three types of ecosystems from September 2011 to October 2012. Harvested samples of each plant were separately collected in plastic bags and labeled with region and date of collection. The bags were transported to the laboratory on the same day and stored in a refrigerator at about 4°C for up to a week, until the materials washed for mite extraction. Samples were composed of leaves, stems and shoots of different ages and the number of leaves per sample varied between plant species. In order to assimilate the samples, a volume nearly equal mass of each sample were put in a two-liter water container. The mites were floated on water by adding 1.5 liters of tap water and a few droplets of detergent. The plant leaves and shoots were shaken for several times until the mites fall from

  14. EVALUATION OF DIFFERENT PRE-GERMINATIVE METHODS FOR THREE TREE SPECIES OF THE FABACEAE FAMILY IN DIFFERENT ENVIRONMENTS

    Directory of Open Access Journals (Sweden)

    R N Costa

    2018-02-01

    Full Text Available The Sesbania virgata (Cav. Pers., Mimosa caesalpiniifolia Benth. and Cassia grandis L.f. species belong to the Fabaceae family, are characterized by their seeds present a dormant state, which limits the germination. The aim of this study was to evaluate the efficiency of pre-germination treatments to overcome dormancy these species. Seeds were collected from matrix trees, located in Agreste of Alagoas and the research developed at the Federal University of Alagoas – Campus de Arapiraca. Overcoming of dormancy was studied in laboratory and greenhouse, where they were employed eight treatments with four replications of 25 seeds, in a completely randomized design: immersion in sulfuric acid (in three periods of immersion, depending on species, scarification with sandpaper, immersion in hot water at 80 °C (2.5 and 5 minutes, imbibition for 24 hours in distilled water and control (seeds without the application of any treatment. The evaluation of the results was made through of germination and emergence percentage; germination and emergence speed index and germination and emergence average time. The pre-germination treatments, mechanical scarification with sandpaper and chemical scarification with sulfuric acid in different immersion times were the most efficient to overcome the seeds dormancy of Sesbania virgata, Mimosa caesalpiniifolia and Cassia grandis Independent of the studied environments.

  15. Isotopic variation in five species of stream fishes under the influence of different land uses.

    Science.gov (United States)

    Carvalho, D R; Castro, D; Callisto, M; Moreira, M Z; Pompeu, P S

    2015-09-01

    The aim of this study was to test if changes in land use alter the isotopic signature of fish species, promoting changes in the trophic position and food resource partitioning between these consumers. Three different systems were investigated: pasture streams (n = 3), streams in sugar cane plantations (n = 3) and reference streams (n = 3). Fish species Aspidoras fuscoguttatus, Astyanax altiparanae, Characidium zebra, Hisonotus piracanjuba and Knodus moenkhausii were selected, and their nitrogen and carbon isotopic compositions were estimated to assess changes in the trophic level and partitioning of food items consumed. The composition of δ(13) C (‰) only differed among the land use categories for A. altiparanae, H. piracanjuba and K. moenkhausii. Resource partitioning was different for all species, with changes in the sources or proportions they consumed in each land use category, but only A. altiparanae introduced new food sources in large quantity in altered land uses. It is important to note, however, that the results from the resource partitioning analysis are limited due to large overlapping of isotopic signatures between the analysed food resources. All fish species exhibited variation in δ(15) N (‰), with the highest values found in streams under sugar cane or pasture influence. Despite the variation in nitrogen isotopic values, only C. zebra and H. piracanjuba displayed changes in trophic level. Therefore, it is believed that the increase in the δ(15) N (‰) value of the individuals collected in streams under the influence of sugar cane or pasture was due to the greater influence of livestock dung and chemical and organic fertilizers. The results also highlight the importance of studying consumer species along with all forms of resources available at each location separately, because the signatures of these resources also vary within different land uses. © 2015 The Fisheries Society of the British Isles.

  16. Characteristics of organic acids in the fruit of different pumpkin species.

    Science.gov (United States)

    Nawirska-Olszańska, Agnieszka; Biesiada, Anita; Sokół-Łętowska, Anna; Kucharska, Alicja Z

    2014-04-01

    The aim of the research was to determine the composition of organic acids in fruit of different cultivars of three pumpkin species. The amount of acids immediately after fruit harvest and after 3 months of storage was compared. The content of organic acids in the examined pumpkin cultivars was assayed using the method of high performance liquid chromatography (HPLC). Three organic acids (citric acid, malic acid, and fumaric acid) were identified in the cultivars, whose content considerably varied depending on a cultivar. Three-month storage resulted in decreased content of the acids in the case of cultivars belonging to Cucurbita maxima and Cucurbita pepo species, while a slight increase was recorded for Cucurbita moschata species. Crown Copyright © 2013. Published by Elsevier Ltd. All rights reserved.

  17. Impact of different soil cultivation on weed species in winter rape (oilseed

    Directory of Open Access Journals (Sweden)

    Jan Winkler

    2005-01-01

    occurrence. The third group consists of species such as: Cirsium arvense, Chamomilla recutita, Galium aparine, Lactuca serriola, Matricaria maritima, Triticum aestivum and Viola arvensis. Their cover and frequency of occurrence were in a more degree influenced by factors different from the type of tillage. The manner of tillage appears to be only one of a number of factors that affect the occurrence of weed species. It influences them together with other factors and it is a factor of polyfunctional nature.

  18. Subcellular differences in handling Cu excess in three freshwater fish species contributes greatly to their differences in sensitivity to Cu

    Energy Technology Data Exchange (ETDEWEB)

    Eyckmans, Marleen, E-mail: marleen.eyckmans@ua.ac.be [Laboratory for Ecophysiology, Biochemistry and Toxicology, University of Antwerp, Groenenborgerlaan 171, 2020 Antwerp (Belgium); Blust, Ronny; De Boeck, Gudrun [Laboratory for Ecophysiology, Biochemistry and Toxicology, University of Antwerp, Groenenborgerlaan 171, 2020 Antwerp (Belgium)

    2012-08-15

    Since changes in metal distribution among tissues and subcellular fractions can provide insights in metal toxicity and tolerance, we investigated this partitioning of Cu in gill and liver tissue of rainbow trout (Oncorhynchus mykiss), common carp (Cyprinus carpio) and gibel carp (Carassius auratus gibelio). These fish species are known to differ in their sensitivity to Cu exposure with gibel carp being the most tolerant and rainbow trout the most sensitive. After an exposure to 50 {mu}g/l (0.79 {mu}M) Cu for 24 h, 3 days, 1 week and 1 month, gills and liver of control and exposed fish were submitted to a differential centrifugation procedure. Interestingly, there was a difference in accumulated Cu in the three fish species, even in control fishes. Where the liver of rainbow trout showed extremely high Cu concentrations under control conditions, the amount of Cu accumulated in their gills was much less than in common and gibel carp. At the subcellular level, the gills of rainbow trout appeared to distribute the additional Cu exclusively in the biologically active metal pool (BAM; contains heat-denaturable fraction and organelle fraction). A similar response could be seen in gill tissue of common carp, although the percentage of Cu in the BAM of common carp was lower compared to rainbow trout. Gill tissue of gibel carp accumulated more Cu in the biologically inactive metal pool (BIM compared to BAM; contains heat-stable fraction and metal-rich granule fraction). The liver of rainbow trout seemed much more adequate in handling the excess Cu (compared to its gills), since the storage of Cu in the BIM increased. Furthermore, the high % of Cu in the metal-rich granule fraction and heat-stable fraction in the liver of common carp and especially gibel carp together with the better Cu handling in gill tissue, pointed out the ability of the carp species to minimize the disadvantages related to Cu stress. The differences in Cu distribution at the subcellular level of gills

  19. Do ectomycorrhizal and arbuscular mycorrhizal temperate tree species systematically differ in root order-related fine root morphology and biomass?

    OpenAIRE

    Kubisch, Petra; Hertel, Dietrich; Leuschner, Christoph

    2015-01-01

    While most temperate broad-leaved tree species form ectomycorrhizal (EM) symbioses, a few species have arbuscular mycorrhizas (AM). It is not known whether EM and AM tree species differ systematically with respect to fine root morphology, fine root system size and root functioning. In a species-rich temperate mixed forest, we studied the fine root morphology and biomass of three EM and three AM tree species from the genera Acer, Carpinus, Fagus, Fraxinus, and Tilia searching for principal dif...

  20. Identification of Genes under Positive Selection Reveals Differences in Evolutionary Adaptation between Brown-Algal Species

    Directory of Open Access Journals (Sweden)

    Linhong Teng

    2017-08-01

    Full Text Available Brown algae are an important taxonomic group in coastal ecosystems. The model brown algal species Ectocarpus siliculosus and Saccharina japonica are closely related lineages. Despite their close phylogenetic relationship, they vary greatly in morphology and physiology. To obtain further insights into the evolutionary forces driving divergence in brown algae, we analyzed 3,909 orthologs from both species to identify Genes Under Positive Selection (GUPS. About 12% of the orthologs in each species were considered to be under positive selection. Many GUPS are involved in membrane transport, regulation of homeostasis, and sexual reproduction in the small sporophyte of E. siliculosus, which is known to have a complex life cycle and to occupy a wide range of habitats. Genes involved in photosynthesis and cell division dominated the group of GUPS in the large kelp of S. japonica, which might explain why this alga has evolved the ability to grow very rapidly and to form some of the largest sporophytes. A significant number of molecular chaperones (e.g., heat-shock proteins involved in stress responses were identified to be under positive selection in both species, potentially indicating their important roles for macroalgae to cope with the relatively variable environment of coastal ecosystems. Moreover, analysis of previously published microarray data of E. siliculosus showed that many GUPS in E. siliculosus were responsive to stress conditions, such as oxidative and hyposaline stress, whereas our RNA-seq data of S. japonica showed that GUPS in this species were most highly expressed in large sporophytes, which supports the suggestion that selection largely acts on different sets of genes in both marcoalgal species, potentially reflecting their adaptation to different ecological niches.

  1. Species distribution of clinical Acinetobacter isolates revealed by different identification techniques.

    Directory of Open Access Journals (Sweden)

    Jianfeng Wang

    Full Text Available A total of 2582 non-duplicate clinical Acinetobacter spp. isolates were collected to evaluate the performance of four identification methods because it is important to identify Acinetobacter spp. accurately and survey the species distribution to determine the appropriate antimicrobial treatment. Phenotyping (VITEK 2 and VITEK MS and genotyping (16S rRNA and rpoB gene sequencing methods were applied for species identification, and antimicrobial susceptibility test of imipenem and meropenem was performed with a disk diffusion assay. Generally, the phenotypic identification results were quite different from the genotyping results, and their discrimination ability was unsatisfactory, whereas 16S rRNA and rpoB gene sequencing showed consistent typing results, with different resolution. Additionally, A. pittii, A. calcoaceticus and A. nosocomialis, which were phylogenetically close to A. baumannii, accounted for 85.5% of the non-A. baumannii isolates. One group, which could not be clustered with any reference strains, consisted of 11 isolates and constituted a novel Acinetobacter species that was entitled genomic species 33YU. None of the non-A. baumannii isolates harbored a blaOXA-51-like gene, and this gene was disrupted by ISAba19 in only one isolate; it continues to be appropriate as a genetic marker for A. baumannii identification. The resistance rate of non-A. baumannii isolates to imipenem and/or meropenem was only 2.6%, which was significantly lower than that of A. baumannii. Overall, rpoB gene sequencing was the most accurate identification method for Acinetobacter species. Except for A. baumannii, the most frequently isolated species from the nosocomial setting were A. pittii, A. calcoaceticus and A. nosocomialis.

  2. Species Distribution of Clinical Acinetobacter Isolates Revealed by Different Identification Techniques

    Science.gov (United States)

    Feng, Ye; Fu, Ying; Jiang, Yan; Wang, Haiping; Yu, Yunsong

    2014-01-01

    A total of 2582 non-duplicate clinical Acinetobacter spp. isolates were collected to evaluate the performance of four identification methods because it is important to identify Acinetobacter spp. accurately and survey the species distribution to determine the appropriate antimicrobial treatment. Phenotyping (VITEK 2 and VITEK MS) and genotyping (16S rRNA and rpoB gene sequencing) methods were applied for species identification, and antimicrobial susceptibility test of imipenem and meropenem was performed with a disk diffusion assay. Generally, the phenotypic identification results were quite different from the genotyping results, and their discrimination ability was unsatisfactory, whereas 16S rRNA and rpoB gene sequencing showed consistent typing results, with different resolution. Additionally, A. pittii, A. calcoaceticus and A. nosocomialis, which were phylogenetically close to A. baumannii, accounted for 85.5% of the non-A. baumannii isolates. One group, which could not be clustered with any reference strains, consisted of 11 isolates and constituted a novel Acinetobacter species that was entitled genomic species 33YU. None of the non-A. baumannii isolates harbored a bla OXA-51-like gene, and this gene was disrupted by ISAba19 in only one isolate; it continues to be appropriate as a genetic marker for A. baumannii identification. The resistance rate of non-A. baumannii isolates to imipenem and/or meropenem was only 2.6%, which was significantly lower than that of A. baumannii. Overall, rpoB gene sequencing was the most accurate identification method for Acinetobacter species. Except for A. baumannii, the most frequently isolated species from the nosocomial setting were A. pittii, A. calcoaceticus and A. nosocomialis. PMID:25120020

  3. Aquatic insects dealing with dehydration: do desiccation resistance traits differ in species with contrasting habitat preferences?

    Directory of Open Access Journals (Sweden)

    Susana Pallarés

    2016-08-01

    Full Text Available Background Desiccation resistance shapes the distribution of terrestrial insects at multiple spatial scales. However, responses to drying stress have been poorly studied in aquatic groups, despite their potential role in constraining their distribution and diversification, particularly in arid and semi-arid regions. Methods We examined desiccation resistance in adults of four congeneric water beetle species (Enochrus, family Hydrophilidae with contrasting habitat specificity (lentic vs. lotic systems and different salinity optima from fresh- to hypersaline waters. We measured survival, recovery capacity and key traits related to desiccation resistance (fresh mass, % water content, % cuticle content and water loss rate under controlled exposure to desiccation, and explored their variability within and between species. Results Meso- and hypersaline species were more resistant to desiccation than freshwater and hyposaline ones, showing significantly lower water loss rates and higher water content. No clear patterns in desiccation resistance traits were observed between lotic and lentic species. Intraspecifically, water loss rate was positively related to specimens’ initial % water content, but not to fresh mass or % cuticle content, suggesting that the dynamic mechanism controlling water loss is mainly regulated by the amount of body water available. Discussion Our results support previous hypotheses suggesting that the evolution of desiccation resistance is associated with the colonization of saline habitats by aquatic beetles. The interespecific patterns observed in Enochrus also suggest that freshwater species may be more vulnerable than saline ones to drought intensification expected under climate change in semi-arid regions such as the Mediterranean Basin.

  4. Agronomic performances of three vetch species growing under different drought levels

    Directory of Open Access Journals (Sweden)

    Sywar Haffani

    2014-09-01

    Full Text Available The current challenge of agriculture is to get the best yields while overcoming frequent water deficit conditions. The objective of this study was to compare performances of three vetch species (Vicia narbonensis L., V. sativa L., and V. villosa Roth subjected to water stress. Plants were sown in pots under rainout shelter and submitted to four water regimes: control (100% field capacity [FC], 80%, 60%, and 40% FC through 3 yr experiment. Results showed that V. narbonensis had the smallest declines in all the studied variables in response to water restriction but the highest water use efficiency (WUE and stress tolerance index (STI in both control and water-treated plants. This indicates the greater tolerance of this species to water constraint and its better water use. Vicia villosa was characterized by drastic declines in leaf area and DM yield (75% and 64%, respectively. It had also the smallest WUE and STI suggesting its low adaptation to water stress. Vicia sativa showed severe reductions in seed yield and yield components; accordingly, it was the most sensitive species in terms of seed yield. The three species implied avoidance strategies to cope with water stress. The different levels of drought tolerance explain the species ecological distribution in Tunisia.

  5. Comparative functional characterization of eugenol synthase from four different Ocimum species: Implications on eugenol accumulation.

    Science.gov (United States)

    Anand, Atul; Jayaramaiah, Ramesha H; Beedkar, Supriya D; Singh, Priyanka A; Joshi, Rakesh S; Mulani, Fayaj A; Dholakia, Bhushan B; Punekar, Sachin A; Gade, Wasudeo N; Thulasiram, Hirekodathakallu V; Giri, Ashok P

    2016-11-01

    Isoprenoids and phenylpropanoids are the major secondary metabolite constituents in Ocimum genus. Though enzymes from phenylpropanoid pathway have been characterized from few plants, limited information exists on how they modulate levels of secondary metabolites. Here, we performed phenylpropanoid profiling in different tissues from five Ocimum species, which revealed significant variations in secondary metabolites including eugenol, eugenol methyl ether, estragole and methyl cinnamate levels. Expression analysis of eugenol synthase (EGS) gene showed higher transcript levels especially in young leaves and inflorescence; and were positively correlated with eugenol contents. Additionally, transcript levels of coniferyl alcohol acyl transferase, a key enzyme diverting pool of substrate to phenylpropanoids, were in accordance with their abundance in respective species. In particular, eugenol methyl transferase expression positively correlated with higher levels of eugenol methyl ether in Ocimum tenuiflorum. Further, EGSs were functionally characterized from four Ocimum species varying in their eugenol contents. Kinetic and expression analyses indicated, higher enzyme turnover and transcripts levels, in species accumulating more eugenol. Moreover, biochemical and bioinformatics studies demonstrated that coniferyl acetate was the preferred substrate over coumaryl acetate when used, individually or together, in the enzyme assay. Overall, this study revealed the preliminary evidence for varied accumulation of eugenol and its abundance over chavicol in these Ocimum species. Current findings could potentially provide novel insights for metabolic modulations in medicinal and aromatic plants. Copyright © 2016 Elsevier B.V. All rights reserved.

  6. Aquatic insects dealing with dehydration: do desiccation resistance traits differ in species with contrasting habitat preferences?

    Science.gov (United States)

    Pallarés, Susana; Velasco, Josefa; Millán, Andrés; Bilton, David T; Arribas, Paula

    2016-01-01

    Desiccation resistance shapes the distribution of terrestrial insects at multiple spatial scales. However, responses to drying stress have been poorly studied in aquatic groups, despite their potential role in constraining their distribution and diversification, particularly in arid and semi-arid regions. We examined desiccation resistance in adults of four congeneric water beetle species (Enochrus, family Hydrophilidae) with contrasting habitat specificity (lentic vs. lotic systems and different salinity optima from fresh- to hypersaline waters). We measured survival, recovery capacity and key traits related to desiccation resistance (fresh mass, % water content, % cuticle content and water loss rate) under controlled exposure to desiccation, and explored their variability within and between species. Meso- and hypersaline species were more resistant to desiccation than freshwater and hyposaline ones, showing significantly lower water loss rates and higher water content. No clear patterns in desiccation resistance traits were observed between lotic and lentic species. Intraspecifically, water loss rate was positively related to specimens' initial % water content, but not to fresh mass or % cuticle content, suggesting that the dynamic mechanism controlling water loss is mainly regulated by the amount of body water available. Our results support previous hypotheses suggesting that the evolution of desiccation resistance is associated with the colonization of saline habitats by aquatic beetles. The interespecific patterns observed in Enochrus also suggest that freshwater species may be more vulnerable than saline ones to drought intensification expected under climate change in semi-arid regions such as the Mediterranean Basin.

  7. Correlation of [{sup 18}F]FMISO autoradiography and pimonodazole immunohistochemistry in human head and neck carcinoma xenografts

    Energy Technology Data Exchange (ETDEWEB)

    Troost, Esther G.C.; Philippens, Marielle E.P.; Lok, Jasper; Kogel, Albert J. van der; Kaanders, Johannes H.A.M.; Bussink, Johan [Radboud University Nijmegen Medical Centre, Department of Radiation Oncology, Nijmegen (Netherlands); Laverman, Peter; Oyen, Wim J.G.; Boerman, Otto C. [Radboud University Nijmegen (Netherlands). Medical Centre, Department of Nuclear Medicine

    2008-10-15

    Tumour cell hypoxia is a common feature in solid tumours adversely affecting radiosensitivity and chemosensitivity in head and neck squamous cell carcinomas. Positron emission tomography (PET) using the tracer [{sup 18}F]fluoromisonidazole ([{sup 18}F]FMISO) is most frequently used for non-invasive evaluation of hypoxia in human tumours. A series of ten human head and neck xenograft tumour lines was used to validate [{sup 18}F]FMISO as hypoxia marker at the microregional level. Autoradiography after injection of [{sup 18}F]FMISO was compared with immunohistochemical staining for the hypoxic cell marker pimonidazole in the same tumour sections of ten different human head and neck xenograft tumour lines. The methods were compared: first, qualitatively considering the microarchitecture; second, by obtaining a pixel-by-pixel correlation of both markers at the microregional level; third, by measuring the signal intensity of both images; and fourth, by calculating the hypoxic fractions by pimonidazole labelling. The pattern of [{sup 18}F]FMISO signal was dependent on the distribution of hypoxia at the microregional level. The comparison of [{sup 18}F]FMISO autoradiography and pimonidazole immunohistochemistry by pixel-by-pixel analysis revealed moderate correlations. In five tumour lines, a significant correlation between the mean [{sup 18}F]FMISO and pimonidazole signal intensity was found (range, r{sup 2}=0.91 to r {sup 2}=0.99). Comparison of the tumour lines with respect to the microregional distribution pattern of hypoxia revealed that the correlation between the mean signal intensities strongly depended on the microarchitecture. Overall, a weak but significant correlation between hypoxic fractions based on pimonidazole labeling and the mean [{sup 18}F]FMISO signal intensity was observed (r{sup 2}=0.18, p=0.02). For the three tumour models with a ribbon-like microregional distribution pattern of hypoxia, the correlation between the hypoxic fraction and the mean

  8. Do ectomycorrhizal and arbuscular mycorrhizal temperate tree species systematically differ in root order based fine root morphology and biomass?

    Directory of Open Access Journals (Sweden)

    Petra eKubisch

    2015-02-01

    Full Text Available While most temperate broad-leaved tree species form ectomycorrhizal (EM symbioses, a few species have arbuscular mycorrhizas (AM. It is not known whether EM and AM tree species differ systematically with respect to fine root morphology, fine root system size and root functioning. In a species-rich temperate mixed forest, we studied the fine root morphology and biomass of three EM and three AM tree species from the genera Acer, Carpinus, Fagus, Fraxinus and Tilia searching for principal differences between EM and AM trees. We further assessed the evidence of convergence or divergence in root traits among the six co-occurring species. Eight fine root morphological and chemical traits were investigated in root segments of the first to fourth root order in three different soil depths and the relative importance of the factors root order, tree species and soil depth for root morphology was determined. Root order was more influential than tree species while soil depth had only a small effect on root morphology All six species showed similar decreases in specific root length and specific root area from the 1st to the 4th root order, while the species patterns differed considerably in root tissue density, root N concentration, and particularly with respect to root tip abundance. Most root morphological traits were not significantly different between EM and AM species (except for specific root area that was larger in AM species, indicating that mycorrhiza type is not a key factor influencing fine root morphology in these species. The order-based root analysis detected species differences more clearly than the simple analysis of bulked fine root mass. Despite convergence in important root traits among AM and EM species, even congeneric species may differ in certain fine root morphological traits. This suggests that, in general, species identity has a larger influence on fine root morphology than mycorrhiza type.

  9. Prevalence of different Malassezia species in pityriasis versicolor in central India

    Directory of Open Access Journals (Sweden)

    Chaudhary Rahul

    2010-01-01

    Full Text Available Background: In the last 10 years, different studies have shown interesting geographical variations in the prevalence of different Malassezia species in pityriasis versicolor. Aim: Identification of Malassezia species isolated from patients with pityriasis versicolor. Methods: In 100 patients with pityriasis versicolor, Malassezia species were identified by culture in Sabouraud′s dextrose agar containing cycloheximide with olive oil overlay and modified Dixon agar and by doing biochemical tests (catalase reaction, assimilation of glycine, and Tween utilisation tests. Results: In 10 patients, 10% KOH smear was negative, while in 90 patients the smear showed characteristic "spaghetti and meatball" appearance. Of these 90 cases, growth was obtained on modified Dixon′s agar in 87 cases. Fifty of the isolates (57.5% were M. globosa, 15 (17.2% were M. sympodialis, seven (8.0% were suspected M. sympodialis, 6 (6.9% each of the isolates were M. furfur and M. obtusa, and three (3.4% isolates were M. restricta. Conclusion: M. globosa was the most common species, followed by M. sympodialis, M. furfur, M. obtusa, and M. restricta.

  10. Prevalence of different Malassezia species in pityriasis versicolor in central India.

    Science.gov (United States)

    Chaudhary, Rahul; Singh, Sanjay; Banerjee, Tuhina; Tilak, Ragini

    2010-01-01

    In the last 10 years, different studies have shown interesting geographical variations in the prevalence of different Malassezia species in pityriasis versicolor. Identification of Malassezia species isolated from patients with pityriasis versicolor. In 100 patients with pityriasis versicolor, Malassezia species were identified by culture in Sabouraud's dextrose agar containing cycloheximide with olive oil overlay and modified Dixon agar and by doing biochemical tests (catalase reaction, assimilation of glycine, and Tween utilisation tests). In 10 patients, 10% KOH smear was negative, while in 90 patients the smear showed characteristic "spaghetti and meatball" appearance. Of these 90 cases, growth was obtained on modified Dixon's agar in 87 cases. Fifty of the isolates (57.5%) were M. globosa, 15 (17.2%) were M. sympodialis, seven (8.0%) were suspected M. sympodialis, 6 (6.9%) each of the isolates were M. furfur and M. obtusa, and three (3.4%) isolates were M. restricta. M. globosa was the most common species, followed by M. sympodialis, M. furfur, M. obtusa, and M. restricta.

  11. Plant-mediated horizontal transmission of Rickettsia endosymbiont between different whitefly species.

    Science.gov (United States)

    Li, Yi-Han; Ahmed, Muhammad Z; Li, Shao-Jian; Lv, Ning; Shi, Pei-Qiong; Chen, Xiao-Sheng; Qiu, Bao-Li

    2017-12-01

    A growing number of studies have revealed the presence of closely related endosymbionts in phylogenetically distant arthropods, indicating horizontal transmission of these bacteria. Here we investigated the interspecific horizontal transmission of Rickettsia between two globally invasive whitefly species, Bemisia tabaci MEAM1 and B. tabaci MED, via cotton plants. We found both scattered and confined distribution patterns of Rickettsia in these whiteflies. After entering cotton leaves, Rickettsia was restricted to the leaf phloem vessels and could be taken up by both species of the Rickettsia-free whitefly adults, but only the scattered pattern was observed in the recipient whiteflies. Both the relative quantity of Rickettsia and the efficiency of transmitting Rickettsia into cotton leaves were significantly higher in MEAM1 females than in MED females. The retention time of Rickettsia transmitted from MEAM1 into cotton leaves was at least 5 days longer than that of MED. Phylogenetic analysis based on 16S rRNA and gltA genes confirmed that the Rickettsia extracted from the donor MEAM1, the cotton leaves, the recipient MEAM1 and the recipient MED were all identical. We conclude that cotton plants can mediate horizontal transmission of Rickettsia between different insect species, and that the transmission dynamics of Rickettsia vary with different host whitefly species. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  12. Ontogeny of metabolic rate and red blood cell size in eyelid geckos: species follow different paths.

    Directory of Open Access Journals (Sweden)

    Zuzana Starostová

    Full Text Available While metabolism is a fundamental feature of all organisms, the causes of its scaling with body mass are not yet fully explained. Nevertheless, observations of negative correlations between red blood cell (RBC size and the rate of metabolism suggest that size variation of these cells responsible for oxygen supply may play a crucial role in determining metabolic rate scaling in vertebrates. Based on a prediction derived from the Cell Metabolism Hypothesis, metabolic rate should increase linearly with body mass in species with RBC size invariance, and slower than linearly when RBC size increases with body mass. We found support for that prediction in five species of eyelid geckos (family Eublepharidae with different patterns of RBC size variation during ontogenetic growth. During ontogeny, metabolic rate increases nearly linearly with body mass in those species of eyelid geckos where there is no correlation between RBC size and body mass, whereas non-linearity of metabolic rate scaling is evident in those species with ontogenetic increase of RBC size. Our findings provide evidence that ontogenetic variability in RBC size, possibly correlating with sizes of other cell types, could have important physiological consequences and can contribute to qualitatively different shape of the intraspecific relationship between metabolic rate and body mass.

  13. Survey of parasitic fauna of different ornamental freshwater fish species in Iran

    Science.gov (United States)

    Adel, Milad; Ghasempour, Fatemeh; Azizi, Hamid Reza; Shateri, Mohamad Hadi; Safian, Ahmad Reza

    2015-01-01

    Parasitic diseases are harmful and limiting factors in breeding and rearing ornamental fish industry. In this study, 400 apparently healthy ornamental fishes from five species (each species 80 specimens) including: Goldfish (Carassius auratus), guppy (Poecilia reticulate), angelfish (Pterophyllum scalare), discus (Symphsodon discus) and sailfin mollies (Poecilia latipinna) was obtained from a local ornamental fish farm in the north of Iran during 2011 to 2012. The primary purpose of this study was to determine the parasitic infections of aquarium fish in Iran. For this purpose, fish were first examined for ectoparasites using wet mount under a light microscope. Then, the alimentary ducts of fish were observed under light and stereo microscope. In survey of different infection rates for different parasitic infections in examining fish: Dactylogyrus sp., Gyrodactylus sp., Ichthyophthirius multifiliis Trichodina reticulata, Capillaria sp. and Lernaea cyprinacea were collected from five species. All five fish species had Monogenea (Gyrodactylidae and Dactylogyridae) in their skins and gills, the highest prevalence was observed in C. auratus and the lowest was in P. scalare and S. discus. Also, Capillaria sp. was reported as a first record from the abdominal cavity of P. scalare in Iran. Our findings revealed that the protozoal infections are very common among aquarium fishes. Although, no gross pathology was observed among infected fishes, but it is likely that in case of any changes in the environment, then parasitic infections could be harmful. PMID:25992255

  14. Durability postproduction of three species of Kalanchoe (Crassulaceae in vessels with different substrates

    Directory of Open Access Journals (Sweden)

    Antonio Anderson de Jesus Rodrigues

    2015-04-01

    Full Text Available Potted plants have wide appeal among ornamental plants and one of the most produced for the market belong to the genus Kalanchoe. One aspect to be observed in potted plants is their durability post-production when maintained in indoors conditions as offices and homes. This study aimed to evaluate the durability of the pot post-production life of three species of Kalanchoe (K. marmorata, K. thyrsiflora and K. tubiflora on different substrates. The experiment was arranged in a completely randomized design with 40 replicates per treatment in factorial 3 x 2 (three species of Kalanchoe x two substrates - washed sand and coconut fiber. After 30 days, it was evaluated the general aspects as changes in color, leaf abscission and shading of the stem apex. It was found significant differences between species and also between the substrates tested, but only in relation to the general aspects. The species Kalanchoe marmorata and K. tubiflora stood out by receiving top grades in most of the evaluated characteristics. The best substrate that provided plants the maintenance of the most of their ornamental characteristics over the 30 days was the coconut fiber.

  15. Differences in the growth response of three bryophyte species to nitrogen

    Energy Technology Data Exchange (ETDEWEB)

    Salemaa, Maija [Finnish Forest Research Institute, Vantaa Research Unit, P.O. Box 18, FI-01301 Vantaa (Finland)], E-mail: maija.salemaa@metla.fi; Maekipaeae, Raisa [Finnish Forest Research Institute, Vantaa Research Unit, P.O. Box 18, FI-01301 Vantaa (Finland)], E-mail: raisa.makipaa@metla.fi; Oksanen, Jari [University of Oulu, Department of Biology, P.O. Box 3000, FI-90014 Oulu (Finland)], E-mail: jarioksa@sun3.oulu.fi

    2008-03-15

    The effect of nitrogen on biomass production, shoot elongation and relative density of the mosses Pleurozium schreberi, Hylocomium splendens and Dicranum polysetum was studied in a chamber experiment. Monocultures were exposed to 10 N levels ranging from 0.02 to 7.35 g N m{sup -2} during a 90-day period. All the growth responses were unimodal, but the species showed differences in the shape parameters of the curves. Hylocomium and Pleurozium achieved optimum biomass production at a lower N level than Dicranum. Pleurozium had the highest biomass production per tissue N concentration. Tolerance to N was the widest in Dicranum, whereas Hylocomium had the narrowest tolerance. Dicranum retained N less efficiently from precipitation than the other two species, which explained its deviating response. All species translocated some N from parent to new shoots. The results emphasize that the individual responses of bryophytes to N should be known when species are used as bioindicators. - Boreal bryophytes display differences in their sensitivity to nitrogen.

  16. Ontogeny of metabolic rate and red blood cell size in eyelid geckos: species follow different paths.

    Science.gov (United States)

    Starostová, Zuzana; Konarzewski, Marek; Kozłowski, Jan; Kratochvíl, Lukáš

    2013-01-01

    While metabolism is a fundamental feature of all organisms, the causes of its scaling with body mass are not yet fully explained. Nevertheless, observations of negative correlations between red blood cell (RBC) size and the rate of metabolism suggest that size variation of these cells responsible for oxygen supply may play a crucial role in determining metabolic rate scaling in vertebrates. Based on a prediction derived from the Cell Metabolism Hypothesis, metabolic rate should increase linearly with body mass in species with RBC size invariance, and slower than linearly when RBC size increases with body mass. We found support for that prediction in five species of eyelid geckos (family Eublepharidae) with different patterns of RBC size variation during ontogenetic growth. During ontogeny, metabolic rate increases nearly linearly with body mass in those species of eyelid geckos where there is no correlation between RBC size and body mass, whereas non-linearity of metabolic rate scaling is evident in those species with ontogenetic increase of RBC size. Our findings provide evidence that ontogenetic variability in RBC size, possibly correlating with sizes of other cell types, could have important physiological consequences and can contribute to qualitatively different shape of the intraspecific relationship between metabolic rate and body mass.

  17. Differences in shoaling behavior in two species of freshwater fish (Danio rerio and Hyphessobrycon herbertaxelrodi).

    Science.gov (United States)

    Gimeno, Elisabet; Quera, Vicenç; Beltran, Francesc S; Dolado, Ruth

    2016-11-01

    Fish can gain significant adaptive advantages when living in a group and they exhibit a wide variety of types of collective motion. The scientific literature recognizes 2 main patterns: shoals (aggregations of individuals that remain close to each other), and schools (aggregations of aligned, or polarized, individuals). We analyzed the collective motion of 2 social fish species, zebrafish (Danio rerio) and black neon tetra (Hyphessobrycon herbertaxelrodi), and compared their patterns of movement and the effect of group size and environmental constraints such as water column height and tank geometry on the collective motion of both species. We recorded the movement of groups of fish (n = 10 and n = 20) using 2 tank geometries: a rectangular shape and a rectangular shape with rounded corners; and we also manipulated the water column height (15 and 25 cm). We extracted the individual fish trajectories and calculated indices of cohesion, coordination, group density and group shape. The results showed that the 2 species had different types of collective motion: the zebrafish's global motion matched that of a shoal, while the black neon tetra's motion matched that of a school. Indirect evidence indicated that the 2 species tended to occupy the vertical space differently while swimming in a group. Finally, we found that tank geometry did not affect group polarization, whereas group size had an effect on black neon tetra density, which was higher in small group sizes than in large ones. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

  18. Neuroanatomical patterns of the mu, delta, and kappa opioid receptors of rat brain as determined by quantitative in vitro autoradiography

    International Nuclear Information System (INIS)

    Tempel, A.; Zukin, R.S.

    1987-01-01

    Highly specific radioligands and quantitative autoradiography reveal strikingly different neuroanatomical patterns for the mu, delta, and kappa opioid receptors of rat brain. The mu receptors are most densely localized in patches in the striatum, layers I and III of the cortex, the pyramidal cell layer of the hippocampal formation, specific nuclei of the thalamus, the pars reticulata of the substantia nigra, the interpeduncular nucleus, and the locus coeruleus. In contrast, delta receptors are highly confined, exhibiting selective localization in layers I, II, and VIa of the neocortex, a diffuse pattern in the striatum, and moderate concentration in the pars reticulata of the substantia nigra and in the interpeduncular nucleus. delta receptors are absent in most other brain structures. This distribution is unexpected in that the enkephalins, the putative endogenous ligands of the delta receptor, occur essentially throughout the brain. The kappa receptors of rat brain exhibit a third pattern distinct from that of the mu and delta receptors. kappa receptors occur at low density in patches in the striatum and at particularly high density in the nucleus accumbens, along the pyramidal and molecular layers of the hippocampus, in the granular cell layer of the dentate gyrus, specific midline nuclei of the thalamus, and hindbrain regions. kappa receptors appear to be uniformly distributed across regions in the neocortex with the exception of layer III, which revealed only trace levels of binding. An important conclusion of the present study is that delta receptors occur at high density only in the forebrain and in two midbrain structures, whereas mu and kappa receptors exhibit discrete patterns in most major brain regions

  19. Pectin Methylesterase and Pectin Remodelling Differ in the Fibre Walls of Two Gossypium Species with Very Different Fibre Properties

    Science.gov (United States)

    Liu, Qinxiang; Talbot, Mark; Llewellyn, Danny J.

    2013-01-01

    Pectin, a major component of the primary cell walls of dicot plants, is synthesized in Golgi, secreted into the wall as methylesters and subsequently de-esterified by pectin methylesterase (PME). Pectin remodelling by PMEs is known to be important in regulating cell expansion in plants, but has been poorly studied in cotton. In this study, genome-wide analysis showed that PMEs are a large multi-gene family (81 genes) in diploid cotton (Gossypium raimondii), an expansion over the 66 in Arabidopsis and suggests the evolution of new functions in cotton. Relatively few PME genes are expressed highly in fibres based on EST abundance and the five most abundant in fibres were cloned and sequenced from two cotton species. Their significant sequence differences and their stage-specific expression in fibres within a species suggest sub-specialisation during fibre development. We determined the transcript abundance of the five fibre PMEs, total PME enzyme activity, pectin content and extent of de-methylesterification of the pectin in fibre walls of the two cotton species over the first 25–30 days of fibre growth. There was a higher transcript abundance of fibre-PMEs and a higher total PME enzyme activity in G. barbadense (Gb) than in G. hirsutum (Gh) fibres, particularly during late fibre elongation. Total pectin was high, but de-esterified pectin was low during fibre elongation (5–12 dpa) in both Gh and Gb. De-esterified pectin levels rose thereafter when total PME activity increased and this occurred earlier in Gb fibres resulting in a lower degree of esterification in Gb fibres between 17 and 22 dpa. Gb fibres are finer and longer than those of Gh, so differences in pectin remodelling during the transition to wall thickening may be an important factor in influencing final fibre diameter and length, two key quality attributes of cotton fibres. PMID:23755181

  20. Assessing species and stage specific effects of preservation on fish oocytes over different temporal scales

    Directory of Open Access Journals (Sweden)

    M. RAKKA

    2015-09-01

    Full Text Available This study assessed the effect of 10% neutral buffered formalin and of three ethanol solutions of different concentration on Mediterranean sardine and European anchovy oocytes over several temporal scales (days, weeks, months. The two species exhibit differences both in the elemental composition and the shape of their oocytes which further allowed an appraisal of oocyte shrinkage dynamics in relation to oocyte shape, developmental stage and composition. We showed that the effect of the preservative on oocyte size is stage specific while different preservation periods of ovarian material might lead to discrepancies among studies.

  1. Differences in the dry deposition of gaseous elemental I-131 to several leafy vegetable species

    International Nuclear Information System (INIS)

    Shinonaga, T.; Heuberger, H.; Tschiersch, J.

    2004-01-01

    The height of the dry deposition of gaseous elemental 131 I to leafy vegetable is quite uncertain because of the different habit, surface texture and leaf uptake of the different plant species. There is no comparative data on the deposition to various species, but leafy vegetables are taken as reference plants for the estimation of the height of contamination of vegetable foods after a nuclear accident. Therefore new chamber experiments were performed to determine under homogeneous and controlled conditions the dry deposition of gaseous elemental 131 I on mature leafy vegetable. The simultaneous exposition of endive, head lettuce, red oak leaf lettuce and spinach (spring leafy vegetable) rsp. curly kale, white cabbage and spinach (summer leafy vegetable) was arranged. The sample collective of each species was such large that for the expected variation of the results a statistically firm analysis was possible. Significant differences were observed for the 131 I deposition on spring vegetable: the deposition on spinach was roughly 3 times that on leaf lettuce, 4 times that on endive and 9 times that on head lettuce. All summer vegetables showed differences in deposition. For Iodine, the deposition on spinach was roughly 3 times (6 times) that on curly kale and 35 times (100 times) that on white cabbage in the 2 experiments. Washing by deionised water could reduce the contamination only by about 10% for 131 I. (author)

  2. The role of early life experience and species differences in alcohol intake in microtine rodents.

    Directory of Open Access Journals (Sweden)

    Allison M J Anacker

    Full Text Available Social relationships have important effects on alcohol drinking. There are conflicting reports, however, about whether early-life family structure plays an important role in moderating alcohol use in humans. We have previously modeled social facilitation of alcohol drinking in peers in socially monogamous prairie voles. We have also modeled the effects of family structure on the development of adult social and emotional behaviors. Here we assessed whether alcohol intake would differ in prairie voles reared by both parents compared to those reared by a single mother. We also assessed whether meadow voles, a closely related species that do not form lasting reproductive partnerships, would differ in alcohol drinking or in the effect of social influence on drinking. Prairie voles were reared either bi-parentally (BP or by a single mother (SM. BP- and SM-reared adult prairie voles and BP-reared adult meadow voles were given limited access to a choice between alcohol (10% and water over four days and assessed for drinking behavior in social and non-social drinking environments. While alcohol preference was not different between species, meadow voles drank significantly lower doses than prairie voles. Meadow voles also had significantly higher blood ethanol concentrations than prairie voles after receiving the same dose, suggesting differences in ethanol metabolism. Both species, regardless of rearing condition, consumed more alcohol in the social drinking condition than the non-social condition. Early life family structure did not significantly affect any measure. Greater drinking in the social condition indicates that alcohol intake is influenced similarly in both species by the presence of a peer. While the ability of prairie voles to model humans may be limited, the lack of differences in alcohol drinking in BP- and SM-reared prairie voles lends biological support to human studies demonstrating no effect of single-parenting on alcohol abuse.

  3. Habitat-Based Density Models for Three Cetacean Species off Southern California Illustrate Pronounced Seasonal Differences

    Directory of Open Access Journals (Sweden)

    Elizabeth A. Becker

    2017-05-01

    used to produce spatial grids of average species density and spatially-explicit measures of uncertainty. Results provide the first fine scale (10 km density predictions for these species during the cool seasons and reveal distribution patterns that are markedly different from summer/fall, thus providing novel insights into species ecology and quantitative data for the seasonal assessment of potential anthropogenic impacts.

  4. Understanding changes of stomatal conductance under different atmospheric humidity levels for different tropical rainforest species in Biosphere 2

    Science.gov (United States)

    Tornito, A. J. G.

    2016-12-01

    Understanding the dynamics of climate change is one of the biggest questions that scientists across the globe ask today. With understanding climate change comes the need to understand the ecological systems and how their biological and chemical processes contribute to climate change. As ocean ecosystems, rainforests are very productive systems and are responsible for most of the world's carbon budget. To maintain cooler conditions, tropical forests mitigate warming through evapotranspiration. The purpose of this project was to measure short-term plasticity by looking at stomatal conductance levels of different tropical rainforest species of plants in the rainforest, savannah, and desert habitats in the Biosphere 2 facility in Oracle, Arizona. It is known that stomatal conductance is affected by CO2, H2O, and light availability. It has been observed that temperature levels may not affect stomatal conductance because of the variability associated with it. Results indicated that there is a potential trend amongst these rainforest species when placed in different humidity percentage areas. By understanding stomatal conductance in response to humidity, we can better understand how productive rainforest systems are when humidity levels decrease, which may potentially occur as Earth undergoes global climate change.

  5. Survey of vaginal-flora Candida species isolates from women of different age groups by use of species-specific PCR detection.

    Science.gov (United States)

    Vermitsky, John-Paul; Self, Matthew J; Chadwick, Sean G; Trama, Jason P; Adelson, Martin E; Mordechai, Eli; Gygax, Scott E

    2008-04-01

    A retrospective survey of 93,775 samples testing positive in Candida species-specific PCR tests performed on cervicovaginal swabs over a 4-year period demonstrated consistent yearly distributions of Candida albicans (89%), C. glabrata (7.9%), C. parapsilosis (1.7%), and C. tropicalis (1.4%). However, the species distributions among different age groups revealed increases in the percentages of non-albicans species with increases in age.

  6. Species groups occupying different trophic levels respond differently to the invasion of semi-natural vegetation by Solidago canadensis

    NARCIS (Netherlands)

    Groot, de M.; Kleijn, D.; Jogan, N.

    2007-01-01

    We studied the impact of the invasive plant species Solidago canadensis on the species richness of vascular plants and the abundance, species richness and diversity of butterflies, hoverflies and carabid beetles in herbaceous semi-natural habitats near Ljubljana, Slovenia. The species groups were

  7. Effect of different plant species in pilot constructed wetlands for wastewater reuse in agriculture

    Directory of Open Access Journals (Sweden)

    Salvatore Barbagallo

    2013-09-01

    Full Text Available In this paper the first results of an experiment carried out in Southern Italy (Sicily on the evapotranspiration (ET and removal in constructed wetlands with five plant species are presented. The pilot plant used for this study is made of twelve horizontal sub-surface flow constructed wetlands (each with a surface area of 4.5 m2 functioning in parallel, and it is used for tertiary treatment of part of the effluents from a conventional municipal wastewater treatment plant (trickling filter. Two beds are unplanted (control while ten beds are planted with five different macrophyte species: Cyperus papyrus, Vetiveria zizanoides, Miscanthus x giganteus, Arundo donax and Phragmites australis (i.e., every specie is planted in two beds to have a replication. The influent flow rate is measured in continuous by an electronic flow meter. The effluent is evaluated by an automatic system that measure the discharged volume for each bed. Physical, chemical and microbiological analyses were carried out on wastewater samples collected at the inlet of CW plant and at the outlet of the twelve beds. An automatic weather station is installed close to the experimental plant, measuring air temperature, wind speed and direction, rainfall, global radiation, relative humidity. This allows to calculate the reference Evapotranspiration (ET0 with the Penman-Monteith formula, while the ET of different plant species is measured through the water balance of the beds. The first results show no great differences in the mean removal performances of the different plant species for TSS, COD and E.coli, ranged from, respectively, 82% to 88%, 60% to 64% and 2.7 to 3.1 Ulog. The average removal efficiency of nutrient (64% for TN; 61 for NH4-N, 31% for PO4-P in the P.australis beds was higher than that other beds. From April to November 2012 ET measured for plant species were completely different from ET0 and ETcontrol, underlining the strong effect of vegetation. The cumulative

  8. Analysis of 18F-labelled synthesis products on TLC plates: Comparison of radioactivity scanning, film autoradiography, and a phosphoimaging technique

    International Nuclear Information System (INIS)

    Kaemaeraeinen, Eeva-Liisa; Haaparanta, Merja; Siitari-Kauppi, Marja; Koivula, Teija; Lipponen, Tiina; Solin, Olof

    2006-01-01

    We compared radioactivity scanning, film autoradiography, and digital photostimulated luminescence (PSL) autoradiography (phosphoimaging technique) in detection of radioactivity on thin-layer chromatography (TLC) plates. TLC combined with radioactivity detection is rapid, simple, and relatively flexible. Here, 18 F-labelled synthesis products were analyzed by TLC and the radioactivity distribution on the plates determined using the three techniques. Radioactivity scanning is appropriate only with good chromatographic resolution and previously validated scanning parameters. Film autoradiography exhibits poor linearity if radioactivity varies greatly. PSL provides high sensitivity and resolution and superior linearity compared with the other methods

  9. Dependency and Response of Apuleia leiocarpa to Inoculation with Different Species of Arbuscular Mycorrhizal Fungi

    Directory of Open Access Journals (Sweden)

    Joel Quintino de Oliveira Júnior

    Full Text Available ABSTRACT Inoculation with arbuscular mycorrhizal fungi (AMF is a strategy to improve the efficiency of forest plantations, reducing costs and increasing the survival of plant species. The objective of this study was to assess the response and mycorrhizal dependency of seedlings of the forest species Apuleia leiocarpa (Vogel J.F. Macbr to inoculation with AMF. The experiment was conducted in a completely randomized design using a 5 × 5 factorial arrangement with six replications. The treatments consisted of combinations of five P rates (0, 24, 71, 213, and 650 mg kg-1 with five types of inoculations with AMF (inoculation with the fungi Rhizophagus clarus, Gigaspora margarita, Dentiscutata heterogama, inoculation with an AMF mix of these three species, and a treatment without inoculation. The A. leiocarpa showed the highest biomass accumulations in inoculation with D. hetorogama combined with the P rates of 213 and 650 mg kg-1, and in the AMF mix combined with the P rates of 71, 213, and 650 kg-1. Biomass accumulation showed a linear, positive response to inoculation with D. heterogama combined with the different P rates, and a positive square root fit to inoculation with the AMF mix. The plants inoculated with G. margarita had no significant biomass accumulation. The plant species had a positive response to inoculation with R. clarus combined with the lowest P rates; however, it had a negative response to combination with the highest P rate (650 mg kg-1. The relative benefit of inoculation with these fungi was more than 100 % in most treatments, showing the high mycorrhizal dependency of A. leiocarpa and the nutritional benefit of AMF inoculation for this species. However, this response is dependent on the fungus species that colonize the plant roots. The best combination between fungus and P rate was inoculation with the AMF mix combined with the P rate of 71 mg kg-1.

  10. Accumulation of cesium-137 by different species of plants in the zone of floods

    International Nuclear Information System (INIS)

    Matsko, V.P.; Gaponenko, V.I.; Sukhover, L.K.

    2000-01-01

    Study was carried out in some areas of Brest, Gomel and Mogilev regions suffering from periodical floods. Cesium-137 accumulation by plants of various species and families differing phylogenetically and with different root systems has been investigated. The specific activity of soil (SAS) for Cs137 varied within the range of 190...154700 Bq/kg and that of overground phytomass was within 20...28000 Bq/kg. The inverse relationship was found between SAS and the values of radionuclide accumulation factor (RAF) by plants, the correlation of SAP (Bq/kg) and SAS (Bq/kg) as well as great importance of morpho-physiological characteristics in this process. RAF in higly organized species (angiospermous) is lower than in phylogenetically older plants (lichens, mosses)

  11. The discovery, function and development of the variable number tandem repeats in different Mycobacterium species.

    Science.gov (United States)

    Sun, Zhaogang; Li, Weimin; Xu, Shaofa; Huang, Hairong

    2016-09-01

    The method of genotyping by variable number tandem repeats (VNTRs) facilitates the epidemiological studies of different Mycobacterium species worldwide. Until now, the VNTR method is not fully understood, for example, its discovery, function and classification. The inconsistent nomenclature and terminology of VNTR is especially confusing. In this review, we first describe in detail the VNTRs in Mycobacterium tuberculosis (M. tuberculosis), as this pathogen resulted in more deaths than any other microbial pathogen as well as for which extensive studies of VNTRs were carried out, and then we outline the recent progress of the VNTR-related epidemiological research in several other Mycobacterium species, such as M. abscessus, M. africanum, M. avium, M. bovis, M. canettii, M. caprae, M. intracellulare, M. leprae, M. marinum, M. microti, M. pinnipedii and M. ulcerans from different countries and regions. This article is aimed mainly at the practical notes of VNTR to help the scientists in better understanding and performing this method.

  12. Chemically emulsified crude oil as substrate for bacterial oxidation : differences in species response

    International Nuclear Information System (INIS)

    Bruheim, P.; Eimhjellen, K.

    1998-01-01

    The ability of bacterial species to oxidize alkanes in crude oil in water emulsions was studied. Alkanes in crude oil need specific physiological adaptations to the microorganisms. Synthesis of biosurfactants has been considered as a prerequisite for either specific adhesion mechanisms to large oil drops or emulsification of oil followed by uptake of submicron oil droplets. In this study four bacterial species were tested. Emulsions were prepared by nonionic sorbitan ester and polyoxyethylene ether surfactants. The oxidation rates were measured. Both positive and negative effects of surfactant amendments were observed. The same surfactant affected different bacteria in different ways. The response to the surfactant amendment depended on the physiological state of the bacteria. The results showed that surfactants resulted in decreased cell adhesion to the oil phase for all the bacteria. 19 refs., 3 tabs., 4 figs

  13. Comparative proteomics of milk fat globule membrane in different species reveals variations in lactation and nutrition.

    Science.gov (United States)

    Lu, Jing; Wang, Xinyu; Zhang, Weiqing; Liu, Lu; Pang, Xiaoyang; Zhang, Shuwen; Lv, Jiaping

    2016-04-01

    In present study, 312, 554, 175 and 143 proteins were identified and quantified by label-free quantitative proteomics in human, cow, goat and yak milk fat globule membrane (MFGM), respectively. Fifty proteins involved in vesicle mediate transport and milk fat globule secretion were conserved among species. Moreover, proteins involved in lipid synthesis and secretion (xanthine dehydrogenase/oxidase, stomatin and CD36), showed different expression pattern and the host defense proteins exhibited various profiles within species. Notably, the content and activity of lipid catabolic enzymes were significantly higher in human MFGM, which could be indicative of the superior fat utilization in breast fed infants. Our findings unraveled the significant differences in protein composition of human milk and conventionally used substitutes of it. The in-depth study of lipid metabolic enzymes in human MFGM will probably contribute to the improvement of the fat utilization through modulation of lipid catabolic enzymes in infant formula. Copyright © 2015 Elsevier Ltd. All rights reserved.

  14. Sensitive method for the determination of different S(IV) species in cloud and fog water.

    Science.gov (United States)

    Lammel, G

    1996-08-01

    Suppressed ion chromatography has been applied to the determination of S(IV) species in cloud and fog water in the range 0.012-2.4 mg S(IV)-S/L. The samples have been preserved prior to storage and S(IV) species have been determined as hydroxy methanesulfonate (HMS) together with the low molecular weight carboxylic acid anions, formate and acetate. Samples have been divided and treated differently such that total S(IV) as well as the non-oxidizable fraction of S(IV) (as given by the reactivity with H(2)O(2), added in surplus) could be determined. The difference between the two corresponds to the S(IV) fraction subjected to oxididation, which is of paramount interest in cloud and fogwater chemistry.

  15. Phase-II conjugation ability for PAH metabolism in amphibians: characteristics and inter-species differences.

    Science.gov (United States)

    Ueda, Haruki; Ikenaka, Yoshinori; Nakayama, Shouta M M; Tanaka-Ueno, Tomoko; Ishizuka, Mayumi

    2011-10-01

    The present study examines amphibian metabolic activity - particularly conjugation - by analysis of pyrene (a four ring, polycyclic aromatic hydrocarbon) metabolites using high-performance liquid chromatography (HPLC) with fluorescence detector (FD), a mass spectrometry detector (MS) system and kinetic analysis of conjugation enzymes. Six amphibian species were exposed to pyrene (dissolved in water): African claw frog (Xenopus laevis); Tago's brown frog (Rana tagoi); Montane brown frog (Rana ornativentris); Wrinkled frog (Rana rugosa); Japanese newt (Cynops pyrrhogaster); and Clouded salamander (Hynobius nebulosus); plus one fish species, medaka (Oryzias latipes); and a fresh water snail (Clithon retropictus), and the resultant metabolites were collected. Identification of pyrene metabolites by HPLC and ion-trap MS system indicated that medaka mainly excreted pyrene-1-glucuronide (PYOG), while pyrene-1-sulfate (PYOS) was the main metabolite in all amphibian species. Pyrene metabolites in amphibians were different from those in invertebrate fresh water snails. Inter-species differences were also observed in pyrene metabolism among amphibians. Metabolite analysis showed that frogs relied more strongly on sulfate conjugation than did Japanese newts and clouded salamanders. Furthermore, urodelan amphibians, newts and salamanders, excreted glucose conjugates of pyrene that were not detected in the anuran amphibians. Kinetic analysis of conjugation by hepatic microsomes and cytosols indicated that differences in excreted metabolites reflected differences in enzymatic activities. Furthermore, pyrenediol (PYDOH) glucoside sulfate was detected in the Japanese newt sample. This novel metabolite has not been reported previously to this report, in which we have identified unique characteristics of amphibians in phase II pyrene metabolism. Copyright © 2011 Elsevier B.V. All rights reserved.

  16. Alien species in different habitat types of Slovenia: analysis of vegetation database

    OpenAIRE

    Küzmič, Filip; Šilc, Urban

    2017-01-01

    Background and purpose: Invasion by alien plant species is considered as one of major threats to biodiversity. Actual invasion of different habitats in particular country is important for understanding processes that are important in invasion ecology as well as for the nature conservation.Materials and methods: Vegetation relevés stored in a database Vegetation of Slovenia were translated into 30 EUNIS habitat types which enables comparison with similar studies in other European countries. Ou...

  17. Durability postproduction of three species of Kalanchoe (Crassulaceae) in vessels with different substrates

    OpenAIRE

    Antonio Anderson de Jesus Rodrigues; Rebeca de Araújo Torres; Adriely Fernandes Vieira; Luciana Ferreira de Lima; Roberto Jun Takane; Kathia Fernandes Lopes Pivetta

    2015-01-01

    Potted plants have wide appeal among ornamental plants and one of the most produced for the market belong to the genus Kalanchoe. One aspect to be observed in potted plants is their durability post-production when maintained in indoors conditions as offices and homes. This study aimed to evaluate the durability of the pot post-production life of three species of Kalanchoe (K. marmorata, K. thyrsiflora and K. tubiflora) on different substrates. The experiment was arranged in a completely rando...

  18. Study on Folate Binding Domain of Dihydrofolate Reductase in Different Plant species and Human beings

    OpenAIRE

    Samanta, Aveek; Datta, Animesh Kumar; Datta, Siraj

    2014-01-01

    Data base (NCBI and TIGR) searches are made to retrieve protein sequences of different plant species namely Medicago truncatula, Pisum sativum, Ricinus communis, Arabidopsis thaliana, Vitis vinifera, Glycine max, Daucus carota, Oryza sativa Japonica Group, Arabidopsis lyrata subsp. lyrata, Brachypodium distachyon, Oryza sativa Indica Group, Zea mays and careful alignment of derived sequences shows 95% or higher identity. Similarly, DHFR sequence of human being is also retrieved from NCBI. A p...

  19. The phosphatidylinositol species of suspension cultured plant cells

    International Nuclear Information System (INIS)

    Heim, S.; Wagner, K.G.

    1987-01-01

    Suspension cultured Nicotiana tabacum and Catharanthus roseus cells were labeled with [ 3 H]inositol, the phospholipid fraction extracted and separated by thin layer chromatography. Three different solvent systems and reference compounds were used to assign the different 3 H-labeled species by autoradiography. The ratio of [ 3 H]inositol incorporation into PI, PIP and PIP 2 was found to be 95:4:1; with some preparations a lyso-PI band was obtained which incorporated about a tenth of the label of the PIP band. With Catharanthus roseus cells a very faint band between PI and lyso-PI was detected which could not be assigned to a reference compound. (orig.)

  20. Rhizobium nepotum sp. nov. isolated from tumors on different plant species.

    Science.gov (United States)

    Puławska, Joanna; Willems, Anne; De Meyer, Sofie E; Süle, Sandor

    2012-06-01

    Five Gram-negative, rod-shaped, non-spore-forming bacteria were isolated from galls on different plant species in Hungary: strain 39/7(T) from Prunus cerasifera Myrobalan, strain 0 from grapevine var. Ezerjó, strain 7/1 from raspberry var. Findus and in Poland, strain C3.4.1 from Colt rootstock (Prunus avium × Prunus pseudocerasus) and strain CP17.2.2 from Prunus avium. Only one of these isolates, strain 0, is able to cause crown gall on different plant species. On the basis of 16S rRNA gene sequence similarity, the strains cluster together and belong to the genus Rhizobium and their closest relative is Rhizobium radiobacter (99.1%). Phylogenetic analysis of the novel strains using housekeeping genes atpD, glnA, gyrB, recA and rpoB revealed their distinct position separate from other known Rhizobium species and confirmed their relation to Rhizobium radiobacter. The major cellular fatty acids are 18:1 w7c, 16:0, 16:0 3OH, summed feature 2 (comprising 12:0 aldehyde, 16:1 iso I and/or 14:0 3OH) and summed feature 3 (comprising 16:1 w7c and/or 15 iso 2OH). DNA-DNA hybridization of strain 39/7(T) with the type strain of R. radiobacter LMG 140(T) revealed 45% DNA-DNA hybridization. Phenotypic and physiological properties differentiate the novel isolates from other closely related species. On the basis of the results obtained, the five isolates are considered to represent a novel species of the genus Rhizobium, for which the name Rhizobium nepotum sp. nov. (type strain 39/7(T)=LMG 26435(T)=CFBP 7436(T)) is proposed. Copyright © 2012 Elsevier GmbH. All rights reserved.

  1. Relationship between Leaf Surface Characteristics and Particle Capturing Capacities of Different Tree Species in Beijing

    Directory of Open Access Journals (Sweden)

    Weikang Zhang

    2017-03-01

    Full Text Available Leaf surface is a multifunctional interface between a plant and its environment, which affects both ecological and biological processes. Leaf surface topography directly affects microhabitat availability and ability for deposition. In this study, atomic force microscopy (AFM and the resuspended particulate matter method were applied to evaluate the adsorptive capacity of the leaf surface. Patterns of particulate‐capturing capacities in different tree species and the effect of leaf surface features on these capacities were explored. Results indicated the following: (1 more total suspended particles (TSP per unit leaf area were captured by coniferous tree species than by broad‐leaved tree species in a particular order—i.e., Pinus tabuliformis > Pinus bungeana > Salix matsudana > Acer truncatum > Ginkgo biloba > Populus tomentosa; (2 Significant seasonal variation in particulate‐capturing capacities were determined. During the observation period, the broad‐leaved tree species capturing TSP and coarse particulate matter (PM10 clearly exhibited a ∩‐shape pattern— that is, increasing initially and later on decreasing; meanwhile, the ∩‐shape pattern was not clearly shown in P. tabuliformis and P. bungeana. However, no obvious patterns in the absorption of fine particulate matter (PM2.5 were found in the tested tree species; (3 The leaf surface topography, as observed by AFM and scanning electron microscopy, revealed that the broad‐leaved tree exhibits a good correlation between micro‐roughness of leaf surfaces and density of particles settling on leaf surfaces over time. However, the main factors affecting the adsorptive capacities of the leaves in coniferous trees are the number of stomata as well as the amount of epicuticular wax and the properties of the cuticle in different seasons.

  2. SIBLING SPECIES, CALL DIFFERENCES, AND SPECIATION IN GREEN LACEWINGS (NEUROPTERA: CHRYSOPIDAE: CHRYSOPERLA).

    Science.gov (United States)

    Henry, Charles S

    1985-09-01

    Green lacewings of the morphologically homogeneous carnea-plorabunda-downesi group within the chrysopid genus Chrysoperla produce unique, species-specific, substrate-borne songs during courtship and mating; both sexes sing, and partners must reciprocally exchange their acoustical signals before copulation will occur. Two widespread, sympatric North American representatives of this complex, the sibling species pair C. plorabunda and C. downesi, hybridize readily in the laboratory but not in nature. This species pair has been presented as exemplifying sympatric speciation by disruptive selection. Here, it is shown from tape-playback and female-choice experiments that calls represent bona fide reproductive isolating mechanisms between the two species. Furthermore, call analyses of F 1 , F 2 , F 3 , and backcross progeny of the two species confirm polygenic control of call expression, in which different alleles at each of several loci are fixed in each taxon. Sex linkage of traits is absent, but the various features of the calls are not completely independent of one another in their patterns of inheritance. These and other life-history data cast doubt on several major premises of the sympatric speciation hypothesis and suggest that call alteration might have triggered the speciation event giving rise to the siblings. A complex of cryptic "song morphs" physically and ecologically identical to C. plorabunda and C. downesi, but singing different songs, exists in the mountains of western North America, while the Alps of central Europe harbor populations of C. carnea that have undergone call differentiation in an analogous but independent manner. It is proposed that call divergence may in itself be driving the speciation process within this section of Chrysoperla, by greatly accelerating the rate at which full reproductive isolation between populations can be achieved. © 1985 The Society for the Study of Evolution.

  3. Cunea n. g. (Amoebozoa, Dactylopodida) with two cryptic species isolated from different areas of the ocean

    KAUST Repository

    Kudryavtsev, Alexander

    2015-06-01

    © 2015 Elsevier GmbH. This paper describes a new genus, Cunea n. g., of marine naked amoebae with two cryptic species, Cunea profundata and Cunea thuwala, isolated from distant localities in the ocean and different depths (Brazilian abyssal plain, Western Atlantic Ocean, depth >5. km and the Red Sea off the Saudi Arabian coast, depth ca. 58.7. m). Both species are very similar to each other in the set of light microscopic and ultrastructural characters and might be described as a single species, yet their genetic divergence based on 3 molecular markers (small-subunit ribosomal RNA, actin and cytochrome c oxidase subunit 1) corresponds to the level of variation typically observed between different morphospecies of Amoebozoa. In addition, the studied strains differ strongly in their temperature tolerance ranges, C. profundata isolated from the cold Atlantic deep-sea habitat being able to reproduce under lower temperatures than C. thuwala isolated from the warm Red Sea benthos. Molecular phylogenetic analysis based on SSU rRNA gene shows that the new genus robustly branches within the Dactylopodida, but forms an independent clade within this order that does not group with any of its known genera.

  4. Cunea n. g. (Amoebozoa, Dactylopodida) with two cryptic species isolated from different areas of the ocean.

    Science.gov (United States)

    Kudryavtsev, Alexander; Pawlowski, Jan

    2015-06-01

    This paper describes a new genus, Cunea n. g., of marine naked amoebae with two cryptic species, Cunea profundata and Cunea thuwala, isolated from distant localities in the ocean and different depths (Brazilian abyssal plain, Western Atlantic Ocean, depth >5km and the Red Sea off the Saudi Arabian coast, depth ca. 58.7m). Both species are very similar to each other in the set of light microscopic and ultrastructural characters and might be described as a single species, yet their genetic divergence based on 3 molecular markers (small-subunit ribosomal RNA, actin and cytochrome c oxidase subunit 1) corresponds to the level of variation typically observed between different morphospecies of Amoebozoa. In addition, the studied strains differ strongly in their temperature tolerance ranges, C. profundata isolated from the cold Atlantic deep-sea habitat being able to reproduce under lower temperatures than C. thuwala isolated from the warm Red Sea benthos. Molecular phylogenetic analysis based on SSU rRNA gene shows that the new genus robustly branches within the Dactylopodida, but forms an independent clade within this order that does not group with any of its known genera. Copyright © 2015 Elsevier GmbH. All rights reserved.

  5. Pathogenicity of Armillaria Isolates Inoculated on Five Quercus Species at Different Watering Regimes

    Directory of Open Access Journals (Sweden)

    R. Metaliaj

    2006-04-01

    Full Text Available One of three fungal isolates of Armillaria mellea (Vahl: Fr. P. Kummer, A. gallica Marxm. et Romagn. and A. tabescens (Scop.: Fr. Emel. was inoculated on 1,440 three-year-old potted seedlings of five Quercus species (Q. cerris L., Q. ilex L., Q. pubescens Willd., Q. robur L. and Q. trojana Webb. grown at different watering regimes in a greenhouse. Inoculum was represented by a piece of an oak branch colonised with the fungus (or sterile, as a control, which was attached to the unwounded main root of each oak seedling. During the growing season, differences in water availability among seedlings were measured monthly using minimum water potential assessments on noninoculated seedlings receiving an equal amount of water. Although all three Armillaria isolates induced infection, the A. mellea isolate was most pathogenic in all cases, while the A. gallica isolate showed a statistically equal degree of pathogenicity only on the least watered seedlings. Of the Quercus species, Q. ilex showed the greatest number of infected seedlings, Q. robur the smallest. Reducing the water supply to potted oak seedlings could be a useful indicator for detecting differences in pathogenicity between Armillaria species.

  6. The effects of different predator species on antipredator behavior in the Trinidadian guppy, Poecilia reticulata

    Science.gov (United States)

    Botham, M. S.; Kerfoot, C. J.; Louca, V.; Krause, J.

    2006-09-01

    Different types of predators often elicit different antipredator responses in a common type of prey. Alternatively, some prey species may adopt a general response, which provides limited protection from many different types of predator. The Trinidadian guppy, Poecilia reticulata, is faced with a wide range of different predators throughout its range and is known to display varying levels of antipredator behavior depending on the predator assemblage. Pike cichlids, Crenicichla frenata, are regarded as the primary aquatic guppy predator in streams in the northern mountain range in Trinidad. As such, they are seen to be responsible for many of the differences in morphology, life history traits, and behavior between guppy populations from areas with few predators and those from areas with many pike cichlids. In this study we investigated how guppies responded when faced with different predator species using three common aquatic predators. We exposed shoals of ten guppies to one out of four treatments: no predator (control), pike cichlid, acara cichlid ( Aequidens pulcher), and wolf fish ( Hoplias malabaricus); and we made behavioral observations on both focal individuals and the shoal as a whole. Guppies showed significantly greater levels of predator inspection and shoaling behavior, foraged less, spent more time in the surface water, and stayed in significantly larger shoals when faced with pike cichlids than in other treatments. We discuss these results in the context of multiple predator effects.

  7. Identification and interspecies transmission of a novel bocaparvovirus among different bat species in China.

    Science.gov (United States)

    Lau, Susanna K P; Ahmed, Syed Shakeel; Yeung, Hazel C; Li, Kenneth S M; Fan, Rachel Y Y; Cheng, Toni Y C; Cai, Jian-Piao; Wang, Ming; Zheng, Bo-Jian; Wong, Samson S Y; Woo, Patrick C Y; Yuen, Kwok-Yung

    2016-12-01

    We report the discovery of a novel bocaparvovirus, bat bocaparvovirus (BtBoV), in one spleen, four respiratory and 61 alimentary samples from bats of six different species belonging to three families, Hipposideridae, Rhinolophidae and Vespertilionidae. BtBoV showed a higher detection rate in alimentary samples of Rhinolophus sinicus (5.7 %) than those of other bat species (0.43-1.59 %), supporting R. sinicus as the primary reservoir and virus spillover to accidental bat species. BtBoV peaked during the lactating season of R. sinicus, and it was more frequently detected among female than male adult bats (P<0.05), and among lactating than non-lactating female bats (P<0.0001). Positive BtBoV detection was associated with lower body weight in lactating bats (P<0.05). Ten nearly complete BtBoV genomes from three bat species revealed a unique large ORF1 spanning NS1 and NP1 in eight genomes and conserved splicing signals leading to multiple proteins, as well as a unique substitution in the conserved replication initiator motif within NS1. BtBoV was phylogenetically distantly related to known bocaparvoviruses with ≤57.3 % genome identities, supporting BtBoV as a novel species. Ms-BtBoV from Miniopterus schreibersii and Hp-BtBoV from Hipposideros pomona demonstrated 97.2-99.9 % genome identities with Rs-BtBoVs from R. sinicus, supporting infection of different bat species by a single BtBoV species. Rs-BtBoV_str15 represents the first bat parvovirus genome with non-coding regions sequenced, which suggested the presence of head-to-tail genomic concatamers or episomal forms of the genome. This study represents the first to describe interspecies transmission in BoVs. The high detection rates in lactating female and juvenile bats suggest possible vertical transmission of BtBoV.

  8. The characterisation of polycyclic aromatic hydrocarbons emissions from burning of different firewood species in Australia.

    Science.gov (United States)

    Zou, Linda Y; Zhang, Weidong; Atkiston, Steven

    2003-01-01

    Four kinds of woods used for residential heating in Australia were selected and burned under two burning conditions in a domestic wood heater installed in a laboratory. The selected wood species included pine (Pinus radiata), red gum (Eucalvptus camaldulensis), sugar gum (Eucalyptus cladocalyx) and yellow box (Eucalyptus melliodora). The two different burning conditions represented fast burning and slow burning, with the air inlet of the combustion chamber respectively 'full open' and 'half open'. By sampling and analysing particulate and gaseous emissions from the burning of each load of wood under defined experimental conditions, PAHs emissions and their profiles in the particulate and gaseous phases were obtained. 16 species out of the 18 selected PAHs were detected. Of these, seven species were detected in the gaseous phase and most were lower molecular weight compounds.Similarly, more than 10 species of PAHs were detected in the particulate phase and these were mostly heavier molecular weight compounds. Under both burning conditions, emission levels for total PAHs and total genotoxic PAHs were the highest for pine and lowest for sugar gum, with red gum being the second highest, followed by yellow box. Using the specific sampling method, gaseous PAHs accounted for above 90% mass fraction of total PAHs in comparison to particulate PAHs (10%). The majority of the genotoxic PAHs were present in the particulate phase. PAHs emission levels in slow burning conditions were generally higher than those in fast burning conditions.

  9. Neural mechanisms of ranging are different in two species of bats.

    Science.gov (United States)

    Berkowitz, A; Suga, N

    1989-09-01

    The primary cue for ranging by echolocation is the delay between an emitted pulse and its echo. The abilities of several species of bats to discriminate target ranges have been accounted for by a theory which assumes that bats perform cross-correlation analysis of the FM components of pulse and echo. In this study, the neural mechanisms performing the cross-correlation are shown to differ in two species. The mustached bat emits CF-FM pulses with four harmonics (CF1-4 and FM1-4) while the little brown bat emits FM pulses with only one harmonic (FM1). In the auditory cortex of both species, there is a cluster or clusters of delay-tuned neurons. Delay-tuned neurons in the mustached bat utilize delay lines created by neurons which respond to the FM1 component of the pulse and extract range information from the combination of the pulse FM1 and the echo FMn (n = 2, 3, or 4). In contrast, delay-tuned neurons in the little brown bat utilize delay lines evoked by the pulse FM1, which is stronger than the echo FM1, and extract range information from the combination of the pulse FM1 and the echo FM1. Inhibition is involved in creating the delay lines in both species.

  10. The characterisation of polycyclic aromatic hydrocarbons emissions from burning of different firewood species in Australia

    International Nuclear Information System (INIS)

    Zou, Linda Y.; Zhang Weidong; Atkiston, Steven

    2003-01-01

    Emission levels for PAHs varied with the type of wood burned. - Four kinds of woods used for residential heating in Australia were selected and burned under two burning conditions in a domestic wood heater installed in a laboratory. The selected wood species included pine (Pinus radiata), red gum (Eucalyptus camaldulensis), sugar gum (Eucalyptus cladocalyx) and yellow box (Eucalyptus melliodora). The two different burning conditions represented fast burning and slow burning, with the air inlet of the combustion chamber respectively 'full open' and 'half open'. By sampling and analysing particulate and gaseous emissions from the burning of each load of wood under defined experimental conditions, PAHs emissions and their profiles in the particulate and gaseous phases were obtained. 16 species out of the 18 selected PAHs were detected. Of these, seven species were detected in the gaseous phase and most were lower molecular weight compounds. Similarly, more than 10 species of PAHs were detected in the particulate phase and these were mostly heavier molecular weight compounds. Under both burning conditions, emission levels for total PAHs and total genotoxic PAHs were the highest for pine and lowest for sugar gum, with red gum being the second highest, followed by yellow box. Using the specific sampling method, gaseous PAHs accounted for above 90% mass fraction of total PAHs in comparison to particulate PAHs (10%). The majority of the genotoxic PAHs were present in the particulate phase. PAHs emission levels in slow burning conditions were generally higher than those in fast burning conditions

  11. Morphological characterisation and agronomical parameters of different species of Salvia sp. (Lamiaceae).

    Science.gov (United States)

    Mossi, A J; Cansian, R L; Paroul, N; Toniazzo, G; Oliveira, J V; Pierozan, M K; Pauletti, G; Rota, L; Santos, A C A; Serafini, L A

    2011-02-01

    The aim of this work is to assess the morphological characteristics and parameters of biomass production, such as fresh and dry matter weight (FMW and DMW, g/plant), yield of dry matter (YDM) in terms of ton/ha, essential oil content (EOC, mL/100 g) and yield of essential oils (YEO) expressed as L/ha of the following plants Salvia verbenaca, Salvia argentea, Salvia lavandulifolia, Salvia pratensis, Salvia sclarea, Salvia triloba and Salvia officinalis. Except for Salvia argentea (S2) all other species have adapted to the south Brazilian climate conditions, with morphological differences among the species evaluated. In terms of DMW and YDM, S. officinalis was found to be the most productive species with 445.83 g/plant and 11.14 ton/ha. The higher essential oil content and yield was observed for S. officinalis, affording 1.99 mL/100 g and 221.74 L/ha, respectively. Chemical characterisation of the essential oils obtained from hydrodistillation was performed through GC and GC/MSD analyses, which revealed for most of the species studied, α e β-thujone, camphor and 1,8-cineole as major compounds, apart from S. sclarea, for which linalool, linalyl acetate and α-terpineol were the major components.

  12. Morphological characterisation and agronomical parameters of different species of Salvia sp. (Lamiaceae

    Directory of Open Access Journals (Sweden)

    AJ Mossi

    Full Text Available The aim of this work is to assess the morphological characteristics and parameters of biomass production, such as fresh and dry matter weight (FMW and DMW, g/plant, yield of dry matter (YDM in terms of ton/ha, essential oil content (EOC, mL/100 g and yield of essential oils (YEO expressed as L/ha of the following plants Salvia verbenaca, Salvia argentea, Salvia lavandulifolia, Salvia pratensis, Salvia sclarea, Salvia triloba and Salvia officinalis. Except for Salvia argentea (S2 all other species have adapted to the south Brazilian climate conditions, with morphological differences among the species evaluated. In terms of DMW and YDM, S. officinalis was found to be the most productive species with 445.83 g/plant and 11.14 ton/ha. The higher essential oil content and yield was observed for S. officinalis, affording 1.99 mL/100 g and 221.74 L/ha, respectively. Chemical characterisation of the essential oils obtained from hydrodistillation was performed through GC and GC/MSD analyses, which revealed for most of the species studied, α e β-thujone, camphor and 1,8-cineole as major compounds, apart from S. sclarea, for which linalool, linalyl acetate and α-terpineol were the major components.

  13. Evolution of Different Y Chromosomes in Two Medaka Species, Oryzias dancena and O. latipes

    Science.gov (United States)

    Takehana, Yusuke; Demiyah, Diana; Naruse, Kiyoshi; Hamaguchi, Satoshi; Sakaizumi, Mitsuru

    2007-01-01

    Although the sex-determining gene DMY has been identified on the Y chromosome in the medaka (Oryzias latipes), this gene is absent in most Oryzias species, suggesting that closely related species have different sex-determining genes. Here, we investigated the sex-determination mechanism in O. dancena, which does not possess the DMY gene. Since heteromorphic sex chromosomes have not been reported in this species, a progeny test of sex-reversed individuals produced by hormone treatment was performed. Sex-reversed males yielded all-female progeny, indicating that O. dancena has an XX/XY sex-determination system. To uncover the cryptic sex chromosomes, sex-linked DNA markers were screened using expressed sequence tags (ESTs) established in O. latipes. Linkage analysis of isolated sex-linked ESTs showed a conserved synteny between the sex chromosomes in O. dancena and an autosome in O. latipes. Fluorescence in situ hybridization (FISH) analysis of these markers confirmed that sex chromosomes of these species are not homologous. These findings strongly suggest an independent origin of sex chromosomes in O. dancena and O. latipes. Further analysis of the sex-determining region in O. dancena should provide crucial insights into the evolution of sex-determination mechanisms in vertebrates. PMID:17194774

  14. Different histories of two highly variable LTR retrotransposons in sunflower species.

    Science.gov (United States)

    Mascagni, Flavia; Cavallini, Andrea; Giordani, Tommaso; Natali, Lucia

    2017-11-15

    In the Helianthus genus, very large intra- and interspecific variability related to two specific retrotransposons of Helianthus annuus (Helicopia and SURE) exists. When comparing these two sequences to sunflower sequence databases recently produced by our lab, the Helicopia family was shown to belong to the Maximus/SIRE lineage of the Sirevirus genus of the Copia superfamily, whereas the SURE element (whose superfamily was not even previously identified) was classified as a Gypsy element of the Ogre/Tat lineage of the Metavirus genus. Bioinformatic analysis of the two retrotransposon families revealed their genomic abundance and relative proliferation timing. The genomic abundance of these families differed significantly among 12 Helianthus species. The ratio between the abundance of long terminal repeats and their reverse transcriptases suggested that the SURE family has relatively more solo long terminal repeats than does Helicopia. Pairwise comparisons of Illumina reads encoding the reverse transcriptase domain indicated that SURE amplification may have occurred more recently than that of Helicopia. Finally, the analysis of population structure based on the SURE and Helicopia polymorphisms of 32 Helianthus species evidenced two subpopulations, which roughly corresponded to species of the Helianthus and Divaricati/Ciliares sections. However, a number of species showed an admixed structure, confirming the importance of interspecific hybridisation in the evolution of this genus. In general, these two retrotransposon families differentially contributed to interspecific variability, emphasising the need to refer to specific families when studying genome evolution. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Inorganic mercury binding with different sulfur species in anoxic sediments and their gut juice extractions.

    Science.gov (United States)

    Zhong, Huan; Wang, Wen-Xiong

    2009-09-01

    To investigate the roles of different sulfur (S) species in controlling the partitioning and bioavailability of inorganic mercury (Hg) in anoxic sediments, we examined the differential binding of Hg with three key S species in anoxic sediment (mackinawite [FeS], pyrite [FeS2], and S(2-)) and then quantified their extraction by the gut juice of deposit-feeding sipunculans Sipunculus nudus. A sequential extraction method was simultaneously used to distinguish Hg sorption with different sediment components. All three S-containing sediment components could lead to a high binding of Hg in sediments, but most Hg was sorbed with FeS or FeS2 instead of formation of Hg sulfide despite the presence of S(2-) or humic acid. The gut juice extraction was relatively low and constant whenever FeS and FeS2 were in the sediment, indicating that both FeS and FeS2 controlled the Hg gut juice extraction and thus bioavailability. Mercury sorbed with FeS2 had higher gut juice extraction than that with FeS, while Hg sulfide was not extracted, strongly suggesting that Hg sorbed with FeS2 was more bioavailable than that with other S species. Mercury sorbed with FeS had very low bioavailability to sipunculans at a low Hg:S ratio in the sediment but was more bioavailable with increasing Hg:S ratio up to a maximum (approximately 1:10, mole based). The present study showed that different S species (FeS, FeS2) and Hg:S ratios significantly affected the binding and bioavailability of Hg in anoxic sediments.

  16. Species differences in the localization and number of CNS beta adrenergic receptors: Rat versus guinea pig

    International Nuclear Information System (INIS)

    Booze, R.M.; Crisostomo, E.A.; Davis, J.N.

    1989-01-01

    The localization and number of beta adrenergic receptors were directly compared in the brains of rats and guinea pigs. The time course of association and saturability of [125I]cyanopindolol (CYP) binding to slide-mounted tissue sections was similar in rats (Kd = 17 pM) and guinea pigs (Kd = 20 pM). The beta-1 and beta-2 receptor subtypes were examined through the use of highly selective unlabeled receptor antagonists, ICI 118,551 (50 nM) and ICI 89,406 (70 nM). Dramatic species differences between rats and guinea pigs were observed in the neuroanatomical regional localization of the beta adrenergic receptor subtypes. For example, in the thalamus prominent beta-1 and beta-2 receptor populations were identified in the rat; however, the entire thalamus of the guinea pig had few, if any, beta adrenergic receptors of either subtype. Hippocampal area CA1 had high levels of beta-2 adrenergic receptors in both rats and guinea pigs but was accompanied by a widespread distribution of beta-2 adrenergic receptors only in rats. Quantitative autoradiographic analyses of 25 selected neuroanatomical regions (1) confirmed the qualitative differences in CNS beta adrenergic receptor localization, (2) determined that guinea pigs had significantly lower levels of beta adrenergic receptors than rats and (3) indicated a differential pattern of receptor subtypes between the two species. Knowledge of species differences in receptor patterns may be useful in designing effective experiments as well as in exploring the relationships between receptor and innervation patterns. Collectively, these data suggest caution be used in extrapolation of the relationships of neurotransmitters and receptors from studies of a single species

  17. Phytochemical composition, antioxidant activity and HPLC fingerprinting profiles of three Pyrola species from different regions.

    Directory of Open Access Journals (Sweden)

    Dongmei Wang

    Full Text Available The present study was performed to investigate the variation of phytochemical composition, antioxidant activity and High Performance Liquid Chromatography (HPLC fingerprinting profiles of three Pyrola species. Thirteen samples (eight P. decorata, three P. calliantha and two P. renifolia were collected from different regions in China. The tannin, hyperoside and quercetin contents of all samples were determined by reverse-phase HPLC and varied within the range 9.77-34.75, 0.34-2.16 and 0.062-0.147 mg/g dry weigh, respectively. Total flavonoid content was evaluated and varied within the range 16.22-37.82 mg/g dry weight. Antioxidant activity was determined by DPPH assay, with IC50 ranging from 7.96 to 50.33 µg/ml, ABTS•+ and FRAP assay, within the range 612.66-1021.05 and 219.64-398.12 µmol equiv. Trolox/g, respectively. These results revealed that there were significant variations in phytochemical profiles and antioxidant activity among all samples. Due to the higher phytochemical content and significant antioxidant activity, P. calliantha was selected as the most valuable species, and the P. calliantha sample from Left banner of Alxa even possessed the strongest antioxidant activity among all the thirteen samples. Futhermore, Emei Mountain was proved to be the most suitable region for producing P. decorata. Moreover, in order to further evaluate the diversities and quality of Pyrola, HPLC fingerprint analysis coupled with hierarchical cluster and discrimination analyses were introduced to establish a simple, rapid and effective method for accurate identification, classification and quality assessment of Pyrola. Thirteen samples were divided into three groups consistent with their morphological classification. Two types of discriminant functions were generated and the ratio of discrimination was 100%. This method can identify different species of Pyrola and the same species from different regions of origin. Also, it can be used to compare and

  18. Phytochemical composition, antioxidant activity and HPLC fingerprinting profiles of three Pyrola species from different regions.

    Science.gov (United States)

    Wang, Dongmei; He, Fengyuan; Lv, Zhenjiang; Li, Dengwu

    2014-01-01

    The present study was performed to investigate the variation of phytochemical composition, antioxidant activity and High Performance Liquid Chromatography (HPLC) fingerprinting profiles of three Pyrola species. Thirteen samples (eight P. decorata, three P. calliantha and two P. renifolia) were collected from different regions in China. The tannin, hyperoside and quercetin contents of all samples were determined by reverse-phase HPLC and varied within the range 9.77-34.75, 0.34-2.16 and 0.062-0.147 mg/g dry weigh, respectively. Total flavonoid content was evaluated and varied within the range 16.22-37.82 mg/g dry weight. Antioxidant activity was determined by DPPH assay, with IC50 ranging from 7.96 to 50.33 µg/ml, ABTS•+ and FRAP assay, within the range 612.66-1021.05 and 219.64-398.12 µmol equiv. Trolox/g, respectively. These results revealed that there were significant variations in phytochemical profiles and antioxidant activity among all samples. Due to the higher phytochemical content and significant antioxidant activity, P. calliantha was selected as the most valuable species, and the P. calliantha sample from Left banner of Alxa even possessed the strongest antioxidant activity among all the thirteen samples. Futhermore, Emei Mountain was proved to be the most suitable region for producing P. decorata. Moreover, in order to further evaluate the diversities and quality of Pyrola, HPLC fingerprint analysis coupled with hierarchical cluster and discrimination analyses were introduced to establish a simple, rapid and effective method for accurate identification, classification and quality assessment of Pyrola. Thirteen samples were divided into three groups consistent with their morphological classification. Two types of discriminant functions were generated and the ratio of discrimination was 100%. This method can identify different species of Pyrola and the same species from different regions of origin. Also, it can be used to compare and control the

  19. Association of Bartonella Species with Wild and Synanthropic Rodents in Different Brazilian Biomes.

    Science.gov (United States)

    Gonçalves, Luiz Ricardo; Favacho, Alexsandra Rodrigues de Mendonça; Roque, André Luiz Rodrigues; Mendes, Natalia Serra; Fidelis Junior, Otávio Luiz; Benevenute, Jyan Lucas; Herrera, Heitor Miraglia; D'Andrea, Paulo Sérgio; de Lemos, Elba Regina Sampaio; Machado, Rosangela Zacarias; André, Marcos Rogério

    2016-12-15

    Bartonella spp. comprise an ecologically successful group of microorganisms that infect erythrocytes and have adapted to different hosts, which include a wide range of mammals, besides humans. Rodents are reservoirs of about two-thirds of Bartonella spp. described to date; and some of them have been implicated as causative agents of human diseases. In our study, we performed molecular and phylogenetic analyses of Bartonella spp. infecting wild rodents from five different Brazilian biomes. In order to characterize the genetic diversity of Bartonella spp., we performed a robust analysis based on three target genes, followed by sequencing, Bayesian inference, and maximum likelihood analysis. Bartonella spp. were detected in 25.6% (117/457) of rodent spleen samples analyzed, and this occurrence varied among different biomes. The diversity analysis of gltA sequences showed the presence of 15 different haplotypes. Analysis of the phylogenetic relationship of gltA sequences performed by Bayesian inference and maximum likelihood showed that the Bartonella species detected in rodents from Brazil was closely related to the phylogenetic group A detected in other cricetid rodents from North America, probably constituting only one species. Last, the Bartonella species genogroup identified in the present study formed a monophyletic group that included Bartonella samples from seven different rodent species distributed in three distinct biomes. In conclusion, our study showed that the occurrence of Bartonella bacteria in rodents is much more frequent and widespread than previously recognized. In the present study, we reported the occurrence of Bartonella spp. in some sites in Brazil. The identification and understanding of the distribution of this important group of bacteria may allow the Brazilian authorities to recognize potential regions with the risk of transmission of these pathogens among wild and domestic animals and humans. In addition, our study accessed important gaps in

  20. Autoradiography of 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP): Uptake in the monoaminergic pathways and in melanin containing tissues

    Energy Technology Data Exchange (ETDEWEB)

    Lyden, A.; Lindquist, N.G.; Bondesson, U.; Larsson, B.S.; Olsson, L.-I.

    1985-01-01

    A recently discovered neurotoxic compound, 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine, has been found to cause a parkinsonian-like syndrome in man and monkey, but not in laboratory animals such as rat, mouse and guinea pig. MPTP seems to selectively destroy the melanin containing dopaminergic cells in pars compacta of substantia nigra. Lower mammalian species do not have melanin in these cells, which indicates that the presence of neuromelanin may be of importance for the development of MPTP-induced lesions. By means of whole-body autoradiography of TH-MPTP in mice, accumulation and retention was observed in the dopaminergic pathways, in locus ceruleus and in structures in the medulla oblongata and spinal cord. A high uptake was also seen in melanin-containing tissues such as in the eyes of pigmented mice. MPTP has earlier been found to have high affinity in vitro for dopamine melanin, which is similar to the pigment in substantia nigra. The typical features of the MPTP-induced neurotoxicity with destruction of pigmented nerve cells and development of parkinsonism may be due to accumulation adn retention of MPTP and its metabolites in these cells. In species with pigmented nerve cells, such as man and monkey, the accumulation may be much more pronounced because of the melanin affinity of MPTP and its metabolites. (author).

  1. Using maximum topology matching to explore differences in species distribution models

    Science.gov (United States)

    Poco, Jorge; Doraiswamy, Harish; Talbert, Marian; Morisette, Jeffrey; Silva, Claudio

    2015-01-01

    Species distribution models (SDM) are used to help understand what drives the distribution of various plant and animal species. These models are typically high dimensional scalar functions, where the dimensions of the domain correspond to predictor variables of the model algorithm. Understanding and exploring the differences between models help ecologists understand areas where their data or understanding of the system is incomplete and will help guide further investigation in these regions. These differences can also indicate an important source of model to model uncertainty. However, it is cumbersome and often impractical to perform this analysis using existing tools, which allows for manual exploration of the models usually as 1-dimensional curves. In this paper, we propose a topology-based framework to help ecologists explore the differences in various SDMs directly in the high dimensional domain. In order to accomplish this, we introduce the concept of maximum topology matching that computes a locality-aware correspondence between similar extrema of two scalar functions. The matching is then used to compute the similarity between two functions. We also design a visualization interface that allows ecologists to explore SDMs using their topological features and to study the differences between pairs of models found using maximum topological matching. We demonstrate the utility of the proposed framework through several use cases using different data sets and report the feedback obtained from ecologists.

  2. Identification of the same polyomavirus species in different African horseshoe bat species is indicative of short-range host-switching events.

    Science.gov (United States)

    Carr, Michael; Gonzalez, Gabriel; Sasaki, Michihito; Dool, Serena E; Ito, Kimihito; Ishii, Akihiro; Hang'ombe, Bernard M; Mweene, Aaron S; Teeling, Emma C; Hall, William W; Orba, Yasuko; Sawa, Hirofumi

    2017-10-06

    Polyomaviruses (PyVs) are considered to be highly host-specific in different mammalian species, with no well-supported evidence for host-switching events. We examined the species diversity and host specificity of PyVs in horseshoe bats (Rhinolophus spp.), a broadly distributed and highly speciose mammalian genus. We annotated six PyV genomes, comprising four new PyV species, based on pairwise identity within the large T antigen (LTAg) coding region. Phylogenetic comparisons revealed two instances of highly related PyV species, one in each of the Alphapolyomavirus and Betapolyomavirus genera, present in different horseshoe bat host species (Rhinolophus blasii and R. simulator), suggestive of short-range host-switching events. The two pairs of Rhinolophus PyVs in different horseshoe bat host species were 99.9 and 88.8 % identical with each other over their respective LTAg coding sequences and thus constitute the same virus species. To corroborate the species identification of the bat hosts, we analysed mitochondrial cytb and a large nuclear intron dataset derived from six independent and neutrally evolving loci for bat taxa of interest. Bayesian estimates of the ages of the most recent common ancestors suggested that the near-identical and more distantly related PyV species diverged approximately 9.1E4 (5E3-2.8E5) and 9.9E6 (4E6-18E6) years before the present, respectively, in contrast to the divergence times of the bat host species: 12.4E6 (10.4E6-15.4E6). Our findings provide evidence that short-range host-switching of PyVs is possible in horseshoe bats, suggesting that PyV transmission between closely related mammalian species can occur.

  3. Intestinal Helminths in Different Species of Rodents in North Khorasan Province, Northeast of Iran

    Directory of Open Access Journals (Sweden)

    Kourosh ARZAMANI

    2017-06-01

    Full Text Available Background: Rodents are an important source of zoonotic diseases for human. The aim of this study was to determine the infectivity of rodents with intestinal helminths in North Khorasan Province, Iran.Methods: One hundred and thirteen rodents were collected using different collection methods such as kill and live traps, digging of their burrow, filling of their hiding places with water and hand net during 2011-2013. Their alimentary canals were removed in the laboratory and helminths were determined in the department of parasitology, Tehran University of Medical Sciences.Results: Thirteen species of helminths parasites were found in 13 species of rodents, including Aspiculuris tetraptera, Hymenolepis diminuta, Nippostrongylus brasiliensis, Protospirura Seurat, Rictolaria ratti, Skrjabinitaenia lobata, Streptopharagus kuntzi, Syphacia obvelata, Taenia taeniaeformis, Trichuris muris, Cysticercus fasciolaris, Acanthocephal. spp and Trichuris spp. Some of them were reported for the first time in new host in Iran. S. obvelata and A. tetraptera were the most frequent parasites and P. Seurat, R. ratti and C. fasciolaris were found only in one rodent.Conclusion: This is the first study to investigate the intestinal parasites in rodents in this area. Among different species identified, some of helminths were reported in new host.

  4. Indoor simulations reveal differences among plant species in capturing particulate matter

    Science.gov (United States)

    Chen, Jungang; Yu, Xinxiao; Bi, Huaxing; Fu, Yanlin

    2017-01-01

    A number of studies have focused on the capacity of urban trees and shrubs to serve as efficient biological filters to mitigate air pollution. In this study, five different tree species were assessed for this function. Kerria japonica, Sophora japonica, Philadelphus pekinensis, Gleditsia sinensis, and Prunus persica 'Atropurpurea' were tested in a deposition chamber using (NH4)2SO4 particles. We quantified and compared the capability of all tested trees to remove particles by assessing deposition velocity, a measure of the ability to remove particles. When placed in the deposition chamber, S. japonica had the greatest deposition velocity, followed by Philadelphus pekinensis, G. sinensis, Prunus persica 'Atropurpurea,' and K. japonica, in descending order. In addition, the comparison of deposition velocities among these species suggested that certain leaf geometries and surface characteristics of broadleaf trees, such as trichomes and grooves, increased particle capture. However, these results change under a different simulation condition using ambient air, suggesting that some trees actually increase pollutant number concentrations more than reduce particle concentration. This outcome can be explained by the aerodynamic effect of trees exceeding the filtering capacity of vegetation under some conditions. This highlights the difficulty of generalizing species selection criteria for practice use. Accordingly, our results indicate that using vegetation to reduce particle pollution and improve the air quality is not a universally advisable and viable solution. PMID:28520744

  5. Pedestal structure and inter-ELM evolution for different main ion species in ASDEX Upgrade

    Science.gov (United States)

    Laggner, F. M.; Wolfrum, E.; Cavedon, M.; Mink, F.; Bernert, M.; Dunne, M. G.; Schneider, P. A.; Kappatou, A.; Birkenmeier, G.; Fischer, R.; Willensdorfer, M.; Aumayr, F.

    2017-05-01

    In tokamak plasmas with different main ion species, a change in confinement occurs, known as the isotope effect. Experiments comparing hydrogen (H), deuterium (D), and helium (4He) plasmas have been performed to identify processes that define the pedestal structure and evolution in between the crashes of edge localized modes (ELMs). The pedestal top electron densities and temperatures have been matched to compare the pedestal shape and stability. In the D and H discharges, the pedestal electron temperature profiles do not differ, whereas the density profile in H has shallower gradients. Furthermore, the heat flux across the pedestal in H is roughly a factor of two higher than in D. In 4He plasmas at similar stored energy, the pedestal top electron density is roughly a factor of 1.5 larger than in the references owing to the larger effective charge. The peeling-ballooning theory, which is independent of the main ion species mass, can sufficiently describe the pedestal stability in the hydrogenic plasmas. The inter-ELM pedestal evolution has the same sequence of recovery phases for all investigated species, giving evidence that similar mechanisms are acting in the pedestals. This is further supported by a similar evolution of the inter-ELM magnetic signature and the corresponding toroidal structure.

  6. Effect of species, cultivar and phenological stage of different forage legumes on herbage fatty acid composition

    Directory of Open Access Journals (Sweden)

    Giovanni Molle

    2010-01-01

    Full Text Available An experiment was conducted to evaluate the effects of species, cultivar, and phenological stage, on the concentration of fatty acid composition in different forages legumes. Four species and eight cultivars Vicia sativa L. (VS cv. Jose JO, and Nikian NI, Vicia Villosa Roth (VV cv.Haiymaker HA, and Hungivillosa HU Trifolium incarnatum L. (TI cv. Viterbo VI, and Contea CO, and Trifolium alexandrinum L. (TAX cv Marmilla MA and Sacromonte SA were compared. Overall the main factors which influence fatty acids (FA profile appear to be forage species and phenological stage but we need to consider the numerous interaction with these factors; besides the second important FA (C16:0 did not change between different phenological stages whereas linoleic acid increases (about 50% P<0.01 and linolenic acid decreases (about 10% P<0.01 from vegetative to reproductive stage. We observe also a worsening effect (P<0.05 on unsaturated/ saturated (UNSAT/SAT ratio from vegetative to reproductive stage. In conclusion these studies demonstrate a significant genetic component to the level and pattern of fatty acid concentration as well as a key role of the association between phenological stage and cultivars which modulated the amplitude and the trend of fatty acid pattern.

  7. The Genetic Basis of Pigmentation Differences Within and Between Drosophila Species.

    Science.gov (United States)

    Massey, J H; Wittkopp, P J

    2016-01-01

    In Drosophila, as well as in many other plants and animals, pigmentation is highly variable both within and between species. This variability, combined with powerful genetic and transgenic tools as well as knowledge of how pigment patterns are formed biochemically and developmentally, has made Drosophila pigmentation a premier system for investigating the genetic and molecular mechanisms responsible for phenotypic evolution. In this chapter, we review and synthesize findings from a rapidly growing body of case studies examining the genetic basis of pigmentation differences in the abdomen, thorax, wings, and pupal cases within and between Drosophila species. A core set of genes, including genes required for pigment synthesis (eg, yellow, ebony, tan, Dat) as well as developmental regulators of these genes (eg, bab1, bab2, omb, Dll, and wg), emerge as the primary sources of this variation, with most genes having been shown to contribute to pigmentation differences both within and between species. In cases where specific genetic changes contributing to pigmentation divergence were identified in these genes, the changes were always located in noncoding sequences and affected cis-regulatory activity. We conclude this chapter by discussing these and other lessons learned from evolutionary genetic studies of Drosophila pigmentation and identify topics we think should be the focus of future work with this model system. © 2016 Elsevier Inc. All rights reserved.

  8. Interspecies differences of candida species causing recurrent vulvovaginal candidiasis in response to fluconazole treatment

    Directory of Open Access Journals (Sweden)

    Siamak Naji

    2017-07-01

    Methods: The cross-sectional study was performed at Kowsar Gynecology Center, Motahhari educational hospital and Medical Mycology Center, Faculty of Medicine, Urmia, Iran, from October 2013 to July 2015. Those patients referred to the clinic with symptoms of vaginal discharge, itching or burning that swab samples from endo-exocervix and distal fornix discharge were taken. The vaginal discharge samples submitted to Medical Mycology Center, Urmia School of Medicine for the direct microscopic examination and cultures. Identification at the level of species was performed using CHROMagar Candida and Corn meal agar media. The molecular test polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP used for confirming culture results. For the susceptibility assay, disc diffusion method was performed with fluconazole and clotrimazole. Results: In these study 198 samples collected from patients with symptoms of vulvovaginal candidiasis, 77 vulvovaginal candidiasis cases were identified. Candida species are common in primary and recurrent cases in terms of frequency, Candida albicans (85.7%, Candida krusei (10.2% and Candida glabrata (4.1% were identified respectively. Total of 27 cases of recurrent vulvovaginal candidiasis, 10 cases were resistant to both clotrimazole and fluconazole (37% was observed that the most common species are resistant to treatment were Candida albicans by (82.1%, Candida krusei (14.3% and Candida glabrata (3.6% respectively. Drug resistance in Candida albicans, Candida krusei and Candida glabrata causing recurrent vulvovaginal candidiasis included 69.1%, 75% and 100% respectively. Conclusion: Our findings have shown frequency of resistant non-albicans Candida species to fluconazole and clotrimazole is increasing. There is a considerable difference between Candida albicans and non-albicans species, Candida glabrata for the resistance to fluconazole and clotrimazole.

  9. Mercury concentrations in different tissues of turtle and caiman species from the Rio Purus, Amazonas, Brazil.

    Science.gov (United States)

    Eggins, Sam; Schneider, Larissa; Krikowa, Frank; Vogt, Richard C; Da Silveira, Ronis; Maher, William

    2015-12-01

    Total mercury (Hg) concentrations of muscle, liver, blood, and epidermal keratin were measured in typically consumed, economically and culturally important species of turtle (Podocnemis unifilis and Podocnemis expansa) and caiman (Melanosuchus niger and Caiman crocodilus) from the Rio Purus in the Amazon basin, Brazil. Methylmercury (MeHg) concentrations were also measured in muscle tissue, representing the first analysis of MeHg concentrations in Amazonian reptile species. In muscle tissues Hg was mostly MeHg (79-96%) for all species. No correlations existed between animal size and total Hg or MeHg concentrations for any species other than M. niger, possibly as a result of growth dilution or the evolution of efficient Hg elimination mechanisms. Significant linear correlations were found between total Hg concentrations in all pairs of nonlethally sampled tissues (keratin and blood) and internal tissues (muscle and liver) for M. niger and between keratin and internal tissues for P. expansa, indicating that nonlethally sampled tissues can be analyzed to achieve more widespread and representative monitoring of Hg bioaccumulation in Amazonian reptiles. Although mean Hg concentrations in muscle for all species were below the World Health Organization guideline for safe consumption (500 µg kg(-1)), mean concentrations in caiman liver were above the safe limit for pregnant women and children (200 µg kg(-1)). No significant differences were found between total Hg and MeHg concentrations in tissues from wild-caught and farm-raised P. expansa, suggesting that farming may not reduce Hg exposure to humans. © 2015 SETAC.

  10. Cost-effectiveness of conservation payment schemes for species with different range sizes.

    Science.gov (United States)

    Drechsler, Martin; Smith, Henrik G; Sturm, Astrid; Wätzold, Frank

    2016-08-01

    Payments to compensate landowners for carrying out costly land-use measures that benefit endangered biodiversity have become an important policy instrument. When designing such payments, it is important to take into account that spatially connected habitats are more valuable for many species than isolated ones. One way to incentivize provision of connected habitats is to offer landowners an agglomeration bonus, that is, a bonus on top of payments they are receiving to conserve land if the land is spatially connected. Researchers have compared the cost-effectiveness of the agglomeration bonus with 2 alternatives: an all-or-nothing, agglomeration payment, where landowners receive a payment only if the conserved land parcels have a certain level of spatial connectivity, and a spatially homogeneous payment, where landowners receive a payment for conserved land parcels irrespective of their location. Their results show the agglomeration bonus is rarely the most cost-effective option, and when it is, it is only slightly better than one of the alternatives. This suggests that the agglomeration bonus should not be given priority as a policy design option. However, this finding is based on consideration of only 1 species. We examined whether the same applied to 2 species, one for which the homogeneous payment is best and the other for which the agglomeration payment is most cost-effective. We modified a published conceptual model so that we were able to assess the cost-effectiveness of payment schemes for 2 species and applied it to a grassland bird and a grassland butterfly in Germany that require the same habitat but have different spatial-connectivity needs. When conserving both species, the agglomeration bonus was more cost-effective than the agglomeration and the homogeneous payment; thus, we showed that as a policy the agglomeration bonus is a useful conservation-payment option. © 2016 Society for Conservation Biology.

  11. MORPHOPHYSIOLOGICAL PARAMETERS OF SOME STURGEON SPECIES (ACIPENSERIDAE, ACIPENSERIFORMES OF DIFFERENT AGE GROUPS REARED IN AQUACULTURE

    Directory of Open Access Journals (Sweden)

    L. Kurovskaya

    2015-03-01

    Full Text Available Purpose. To study some morphometric parameters, protein and lysozyme content in organs and serum in several sturgeon species reared in aquiculture at the ages of 3, 8 and 18 months, and to investigate the specific and age distribution of lysozyme in fish organs. Methodology. For the experiments we used sturgeon species of different age groups reared in the fish farm «Fortuna XXI» located in the Galerny Gulf of the Dіnprо river. The study objects were: bester (Huso huso×Acipenser ruthenus, age of 3, 8 and 18 months; Russian sturgeon (Acipenser gueldenstaedtii, age of 3 months, Siberian sturgeon (A. baeri and sterlet (A. ruthenus, age of 8 month. Following morphometric parameters were determined in the studied fish: weight (g, length (cm, absolute weight of liver, kidneys, spleen (mg, condition factor and relative weight (index, ‰ of organs. The lysozyme content was determined in serum and extracts of the tissues of fish organs by a diffusion method on the agar and protein content was determined by Louri's method. Findings. We detected significant differences in morphometric parameters, protein and lysozyme content in organs and serum of 3-month bester and Russian sturgeon as well as specific differences of relative organ weight, protein and lysozyme levels in organs and serum of 8-month Siberian sturgeon, bester and sterlet. A comparison of the investigated parameters in 3, 8 and 18-month bester showed an increase in the condition factor with fish growth, significant changes of protein content in fish of different age groups, high level of lysozyme in kidneys and serum of 18-month fish, redistribution of lysozyme contents in fish organs depending on age. Originality. First comparison of several morphophysiological parameters of 3, 8, 18-month sturgeon species (sterlet, Russian sturgeon, Siberian sturgeon, bester reared in aquiculture. Practical value. Taking into account the high commercial value of sturgeon species, the conducted studies

  12. Soil greenhouse gas fluxes from different tree species on Taihang Mountain, North China

    Science.gov (United States)

    Liu, X. P.; Zhang, W. J.; Hu, C. S.; Tang, X. G.

    2014-03-01

    The objectives of this study were to investigate seasonal variation of greenhouse gas fluxes from soils on sites dominated by plantation (Robinia pseudoacacia, Punica granatum, and Ziziphus jujube) and natural regenerated forests (Vitex negundo var. heterophylla, Leptodermis oblonga, and Bothriochloa ischcemum), and to identify how tree species, litter exclusion, and soil properties (soil temperature, soil moisture, soil organic carbon, total N, soil bulk density, and soil pH) explained the temporal and spatial variation in soil greenhouse gas fluxes. Fluxes of greenhouse gases were measured using static chamber and gas chromatography techniques. Six static chambers were randomly installed in each tree species. Three chambers were randomly designated to measure the impacts of surface litter exclusion, and the remaining three were used as a control. Field measurements were conducted biweekly from May 2010 to April 2012. Soil CO2 emissions from all tree species were significantly affected by soil temperature, soil moisture, and their interaction. Driven by the seasonality of temperature and precipitation, soil CO2 emissions demonstrated a clear seasonal pattern, with fluxes significantly higher during the rainy season than during the dry season. Soil CH4 and N2O fluxes were not significantly correlated with soil temperature, soil moisture, or their interaction, and no significant seasonal differences were detected. Soil organic carbon and total N were significantly positively correlated with CO2 and N2O fluxes. Soil bulk density was significantly negatively correlated with CO2 and N2O fluxes. Soil pH was not correlated with CO2 and N2O emissions. Soil CH4 fluxes did not display pronounced dependency on soil organic carbon, total N, soil bulk density, and soil pH. Removal of surface litter significantly decreased in CO2 emissions and CH4 uptakes. Soils in six tree species acted as sinks for atmospheric CH4. With the exception of Ziziphus jujube, soils in all tree

  13. Bioactivation of morphine-3-propionate, a prodrug of morphine, in tissues from different species

    DEFF Research Database (Denmark)

    Groth, L.; Jørgensen, A.; Steffansen, B.

    1997-01-01

    and plasma from rat, rabbit and man, in serum from pig, in liver, kidney, brain, buccal mucosa, muscle and skin homogenate from rat, rabbit and pig and in skin homogenate from man. Within the same species there was no difference in the enzymatic activity in whole blood, serum and plasma. Comparing...... the enzymatic activity in blood fractions from the various species, the activity was higher in man followed by rabbit, rat and pig, respectively. The enzymatic activity in the tissue homogenates was general highest in liver followed by kidney, brain, buccal mucosa, muscle and skin. The tissue homogenate from...... rabbit had higher enzymatic activity than those from rat, which again showed higher activity than those from pig. Comparison of the Michaelis-Menten parameters, K(m) and V(max), obtained using pig and rat serum respectively, suggested that morphine-3-propionate has a lower affinity for enzymes present...

  14. Toxocara cati (Schrank, 1788 (Nematoda, Ascarididae in different wild feline species in Brazil: new host records

    Directory of Open Access Journals (Sweden)

    Moisés Gallas

    2013-09-01

    Full Text Available This is the first detailed description of Toxocara cati parasitizing felines in South America. Seventeen run over wild felines (Leopardus colocolo, Leopardus geoffroyi, Leopardus tigrinus, and Puma yagouaroundi were collected from different towns in the State of Rio Grande do Sul, Brazil. The morphometry of males and females allowed the identification of specimens as being T. cati. The helminths were found in the stomach and intestine of hosts with prevalences of 66.6% in L. colocolo, L. geoffroyi, and L. tigrinus; and 60% in P. yagouaroundi. The ecological parameters were calculated for each host and L. colocolo had the highest infection intensity (22.5 helminths/host. This is the first report of T. cati parasitizing four wild felines species in southern Brazil, besides a new record of this parasite for two host species.

  15. Comprehensive comparative analysis of volatile compounds in citrus fruits of different species.

    Science.gov (United States)

    Zhang, Haipeng; Xie, Yunxia; Liu, Cuihua; Chen, Shilin; Hu, Shuangshuang; Xie, Zongzhou; Deng, Xiuxin; Xu, Juan

    2017-09-01

    The volatile profiles of fruit peels and juice sacs from 108 citrus accessions representing seven species were analyzed. Using GC-MS 162 and 107 compounds were determined in the peels and juice sacs, respectively. In the peels, monoterpene alcohols were accumulated in loose-skin mandarins; clementine tangerines and papedas were rich in sesquiterpene alcohols, sesquiterpenes, monoterpene alcohols and monoterpene aldehydes. β-pinene and sabinene were specifically accumulated in 4 of 5 lemon germplasms. Furthermore, concentrations of 34 distinctive compounds were selected to best represent the volatile profiles of seven species for HCA analysis, and the clustering results were in agreement with classic citrus taxonomy. Comparison of profiles from different growing seasons and production areas indicated that environmental factors play important roles in volatile metabolism. In addition, a few citrus germplasms that accumulated certain compounds were determined as promising breeding materials. Notably, volatile biosynthesis via MVA pathway in C. ichangensis 'Huaihua' was enhanced. Copyright © 2017. Published by Elsevier Ltd.

  16. Molecular identification of different Theileria and Babesia species infecting sheep in Sudan.

    Science.gov (United States)

    El Imam, Ahmed H; Hassan, Shawgi M; Gameel, Ahmed A; El Hussein, Abdelrahim M; Taha, Khalid M; Oosthuizen, Marinda C

    2016-01-01

    The epidemiological aspects of sheep piroplasmosis in Sudan are poorly studied, and further investigations using sensitive and precise techniques are required. In this study, the Reverse Line Blot (RLB) hybridization assay was used to detect and simultaneously differentiate between Theileria and Babesia species. DNA was extracted from blood collected on filter paper (n=219) from apparently healthy sheep from six different geographical localities in Sudan. Results indicated that Theileria ovis (88.6%), T. separata (20.1%), T. lestoquardi (16.4%) and T. annulata (16.4%) DNA could be detected in the blood samples. Single and mixed Theileria infections were detected in 74 (33.8%) and 124 (56.6%) respectively and T. ovis being the most prevalent species in the country. T. ovis and T. separata were reported for the first time in sheep in Sudan.

  17. Seasonal adaptation of dwarf hamsters (Genus Phodopus): differences between species and their geographic origin.

    Science.gov (United States)

    Müller, D; Hauer, J; Schöttner, K; Fritzsche, P; Weinert, D

    2015-12-01

    The genus Phodopus consists of three species--P. campbelli (Pc), P. sungorus (Ps), and P. roborovskii (Pr). They inhabit steppes, semi-deserts, and deserts in continental Asia with a climate changing from a moderate to a hard Continental one with extreme daily and seasonal variations. These different environmental challenges are likely to have consequences for hamsters' morphology, physiology, and behavior. Hamsters of all three species were investigated during the course of the year in the laboratory though using natural lighting and temperature conditions. Motor activity and body temperature were measured continuously, and body mass, testes size, and fur coloration every 1-2 weeks. With regard to the pattern of activity, nearly twice as many Pc as Ps hamsters (25 vs. 14%) failed to respond to changes of photoperiod, whereas all Pr hamsters did. Body mass and testes size were high in summer and low in winter, with the biggest relative change in Ps and the lowest in Pr hamsters. Changes of fur coloration were found in Ps hamsters only. All responding animals (that is excluding Pr), exhibited regular torpor bouts during the short winter days. In autumn, seasonal changes started considerably earlier in Ps hamsters. To investigate the putative causes of these different time courses, a further experiment was performed, to identify the critical photoperiod. Hamsters were kept for 10 weeks under different photoperiods, changing from 16 to 8 h light per day. Motor activity was recorded continuously, to identify responding and non-responding animals. Body mass was measured at the beginning and the end of the experiment, testes mass only at the end. The critical photoperiod was found to be similar in all three species. Though in a further experiment, Pc and Pr hamsters showed a delayed response, whereas the changes in Ps hamsters started immediately following transfer to short-day conditions. The results show that interspecific differences in seasonal adaptation exist, even

  18. Proteolytic activity and cooperative hemolytic effect of dermatophytes with different species of bacteria

    Science.gov (United States)

    Pakshir, K; Mohamadi, T; Khodadadi, H; Motamedifar, M; Zomorodian, K; Alipour, S; Motamedi, M

    2016-01-01

    Background and Purpose: Globally, dermatophytes are the most common filamentous group of fungi causing cutaneous mycoses. Dermatophytes were shown to secrete a multitude of enzymes that play a role in their pathogenesis. There is limited data on co-hemolytic (CAMP-like) effect of different bacterial species on dermatophyte species. In this study, we sought to the evaluate exoenzyme activity and co-hemolytic effect of four bacteria on clinical dermatophytes isolated from patients in Shiraz, Iran. Materials and Methods: A total of 84 clinical dermatophyte species were isolated from patients suffering dermatophytosis and identified by conventional methods. Hemolytic activity was evaluated with Columbia 5% sheep blood agar. Proteolytic activity was determined by plate clearance assay method, using gelatin 8% agar. CAMP-like factor was evaluated with four bacteria, namely, S. areus, S. saprophyticus, S. pyogenes, and S. agalactiae. Fisher's exact test was run for statistical analysis. Results: T. mentagrophytes was the most predominant agent (27 [32.1%]) followed by T. verrucosum(20 [23.8%]), T. tonsurans (10 [11.9%]), Microsporum canis (7 [8.3%]), T. rubrum (6 [7.1%]), E. floccosum (6 [7.1%]), M. gypseum (5 [6%]), and T. violaceum (3[3.6%]). The most common clinical area of dermatophytosis was the skin. All the isolates expressed the zone of incomplete alpha hemolysis. All the isolates had CAMP- positive reaction with S. aureus and the other bacteria were CAMP-negative. All the isolates expressed proteolytic activity and no significant differences were noted among diverse genera of dermatophytes and severities of proteolytic activity. Conclusion: This study indicated that hemolysin and proteolytic enzymes potentially play a role in dermatophyte pathogenesis and S. aureus could be considered as a main bacterium for creation of co-hemolytic effect in association with dermatophyte species. PMID:28959790

  19. Different elevational patterns of rodent species richness between the southern and northern slopes of a mountain.

    Science.gov (United States)

    Shuai, Ling-Ying; Ren, Chun-Lei; Yan, Wen-Bo; Song, Yan-Ling; Zeng, Zhi-Gao

    2017-08-18

    Studies on elevational gradients in biodiversity have accumulated in recent decades. However, few studies have compared the elevational patterns of diversity between the different slopes of a single mountain. We investigated the elevational distribution of rodent diversity (alpha and beta diversity) and its underlying mechanisms along the southern and northern slopes of Mt. Taibai, the highest mountain in the Qinling Mountains, China. The species richness of rodents on the two slopes showed distinct distribution patterns, with a monotonically decreasing pattern found along the southern slope and a hump-shaped elevational pattern evident along the northern slope. Multi-model inference suggested that temperature was an important explanatory factor for the richness pattern along the southern slope, and the mid-domain effect (MDE) was important in explaining the richness pattern along the northern slope. The two slopes also greatly differed in the elevational patterns of species turnover, with the southern slope demonstrating a U-shaped curve and the northern slope possessing a roughly hump-shaped pattern. Our results suggest that even within the same mountain, organisms inhabiting different slopes may possess distinct diversity patterns, and the underlying mechanisms may also differ. The potential role of the factors associated with slope aspect in shaping diversity, therefore, cannot be ignored.

  20. Morphometric differences in two calanoid sibling species, Boeckella gracilipes and B. titicacae (Crustacea, Copepoda

    Directory of Open Access Journals (Sweden)

    Patricio De los Ríos Escalante

    2012-12-01

    Full Text Available Calanoid copepods are abundant in South American inland waters and include widespread species, such as Boeckella gracilipes (Daday, 1902, which occurs from the Ecuador to Tierra del Fuego Island. This species occurs under various environmental conditions, and is found in oligotrophic lakes in Patagonia (39-54°S and in shallow mountain lakes north of 39°S. The aim of the present study is to conduct a morphometric comparison of male specimens of B. titicacae collected in Titicaca and B. gracilipes collected in Riñihue lakes, with a third population of B. gracilipes collected in shallow ponds in Salar de Surire. Titicaca and Riñihue lakes are stable environments, whereas Salar de Surire is an extreme environment. These ponds present an extreme environment due to high exposure to solar radiation and high salinity levels. The results of the study revealed differences among the three populations. These results agree well with systematic descriptions in the literature on differences between the populations of Titicaca and Riñihue lakes, and population of Salar de Surire differs slightly from the other two populations. It is probable that the differences between the population of Salar de Surire and the other two populations result from the extreme environment in Salar de Surire. High exposure to solar radiation, high salinity and extreme variations in temperature enhance genetic variations that are consequently expressed in morphology.

  1. Predicting copper toxicity to different earthworm species using a multicomponent Freundlich model.

    Science.gov (United States)

    Qiu, Hao; Vijver, Martina G; He, Erkai; Peijnenburg, Willie J G M

    2013-05-07

    This study aimed to develop bioavailability models for predicting Cu toxicity to earthworms (Lumbricus rubellus, Aporrectodea longa, and Eisenia fetida) in a range of soils of varying properties. A multicomponent Freundlich model, complying with the basic assumption of the biotic ligands model, was used to relate Cu toxicity to the free Cu(2+) activity and possible protective cations in soil porewater. Median lethal concentrations (LC50s) of Cu based on the total Cu concentration varied in each species from soil to soil, reaching differences of approximately a factor 9 in L. rubellus, 49 in A. longa and 45 in E. fetida. The relative sensitivity of the earthworms to Cu in different soils followed the same order: L. rubellus > A. longa > E. fetida. Only pH not other cations (K(+), Ca(2+), Na(+), and Mg(2+)) were found to exert significant protective effects against Cu toxicity to earthworms. The Freundlich-type model in which the protective effects of pH were included, explained 84%, 94%, and 96% of variations in LC50s of Cu (expressed as free ion activity) for L. rubellus, A. longa, and E. fetida, respectively. Predicted LC50s never differed by a factor of more than 2 from the observed LC50s. External validation of the model showed a similar level of precision, even though toxicity data for other soil organisms and for different endpoints were used. The findings of the present study showed the possibility of extrapolating the developed toxicity models for one earthworm species to another species. Moreover, the Freundlich-type model in which the free Cu(2+) activity and pH in soil porewater are considered can even be used to predict toxicity for other soil invertebrates and plants.

  2. Determination of Active Marine Bacterioplankton: a Comparison of Universal 16S rRNA Probes, Autoradiography, and Nucleoid Staining

    OpenAIRE

    Karner, M.; Fuhrman, J. A.

    1997-01-01

    We compared several currently discussed methods for the assessment of bacterial numbers and activity in marine waters, using samples from a variety of marine environments, from aged offshore seawater to rich harbor water. Samples were simultaneously tested for binding to a fluorescently labeled universal 16S rRNA probe; (sup3)H-labeled amino acid uptake via autoradiography; nucleoid-containing bacterial numbers by modified DAPI (4(prm1),6-diamidino-2-phenylindole) staining; staining with 5-cy...

  3. Post-operative observation of ilio-apophyseal transplants on the basis of radiography, computed tomography, autoradiography and histological assessment

    International Nuclear Information System (INIS)

    Klatt, U.

    1987-01-01

    A study in 25 rabbits, in which the acetabular roof was reinforced by inserting a wedge-shaped autologous tissue fragment of the apophysis, led to the following conclusions: That complete healing and ossification of the implant took place within the observation period; that radiography, computed tomography, autoradiography and histology consistently provided evidence in confirmation of ossification; that a wedge-shaped fragment of apophyseal cartilage is a suitable material for plastic surgery in the acetabular roof. (TRV) [de

  4. 3H-TdR autoradiography in vitro incubation for the evaluation of the therapeutic effect in chronic atrophic gastritis

    International Nuclear Information System (INIS)

    Ding Jie

    1988-01-01

    This paper discussed with the feasibility of using 3 H-TdR autoraoiography in vitro incubation to evaluate the therapeutic effect of atrophic gastritis. The results showed that gastric mucosa labelling indices measured by autoradiography can reflect the property, severity and clincal conditions of chronic gastritis quantitatively. The methodology is raliable and reproducible. It was suggested that labelling indices may serve as a cytokinetic parameter to evaluate the therapeutic effect of atrophic gastritis

  5. Accumulation of mercury in selected plant species grown in soils contaminated with different mercury compounds

    International Nuclear Information System (INIS)

    Su, Yi; Han, Fengxiang; Shiyab, Safwan; Chen, Jian; Monts, David L.

    2007-01-01

    The objective of our research is to screen and search for suitable plant species for phyto-remediation of mercury-contaminated soil. Currently our effort is specifically focused on mercury removal from the U.S. Department of Energy (DOE) sites, where mercury contamination is a major concern. In order to cost effectively implement mercury remediation efforts, it is necessary now to obtain an improved understanding of biological means of removing mercury and mercury compounds.. Phyto-remediation is a technology that uses various plants to degrade, extract, contain, or immobilize contaminants from soil and water. In particular, phyto-extraction is the uptake of contaminants by plant roots and translocation within the plants to shoots or leaves. Contaminants are generally removed by harvesting the plants. We have investigated phyto-extraction of mercury from contaminated soil by using some of the known metal-accumulating plants since no natural plant species with mercury hyper-accumulating properties has yet been identified. Different natural plant species have been studied for mercury uptake, accumulation, toxicity and overall mercury removal efficiency. Various mercury compounds, such as HgS, HgCl 2 , and Hg(NO 3 ) 2 , were used as contaminant sources. Different types of soil were examined and chosen for phyto-remediation experiments. We have applied microscopy and diffuse reflectance spectrometry as well as conventional analytical chemistry to monitor the phyto-remediation processes of mercury uptake, translocation and accumulation, and the physiological impact of mercury contaminants on selected plant species. Our results indicate that certain plant species, such as beard grass (Polypogon monospeliensis), accumulated a very limited amount of mercury in the shoots ( 2 powder, respectively; no visual stress symptoms were observed. We also studied mercury phyto-remediation using aged soils that contained HgS, HgCl 2 , or Hg(NO 3 ) 2 . We have found that up to hundreds

  6. How does biomass distribution change with size and differ among species? An analysis for 1200 plant species from five continents.

    Science.gov (United States)

    Poorter, Hendrik; Jagodzinski, Andrzej M; Ruiz-Peinado, Ricardo; Kuyah, Shem; Luo, Yunjian; Oleksyn, Jacek; Usoltsev, Vladimir A; Buckley, Thomas N; Reich, Peter B; Sack, Lawren

    2015-11-01

    We compiled a global database for leaf, stem and root biomass representing c. 11 000 records for c. 1200 herbaceous and woody species grown under either controlled or field conditions. We used this data set to analyse allometric relationships and fractional biomass distribution to leaves, stems and roots. We tested whether allometric scaling exponents are generally constant across plant sizes as predicted by metabolic scaling theory, or whether instead they change dynamically with plant size. We also quantified interspecific variation in biomass distribution among plant families and functional groups. Across all species combined, leaf vs stem and leaf vs root scaling exponents decreased from c. 1.00 for small plants to c. 0.60 for the largest trees considered. Evergreens had substantially higher leaf mass fractions (LMFs) than deciduous species, whereas graminoids maintained higher root mass fractions (RMFs) than eudicotyledonous herbs. These patterns do not support the hypothesis of fixed allometric exponents. Rather, continuous shifts in allometric exponents with plant size during ontogeny and evolution are the norm. Across seed plants, variation in biomass distribution among species is related more to function than phylogeny. We propose that the higher LMF of evergreens at least partly compensates for their relatively low leaf area : leaf mass ratio. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  7. Speciation of radioactive soil particles in the Fukushima contaminated area by IP autoradiography and microanalyses.

    Science.gov (United States)

    Mukai, Hiroki; Hatta, Tamao; Kitazawa, Hideaki; Yamada, Hirohisa; Yaita, Tsuyoshi; Kogure, Toshihiro

    2014-11-18

    Radioactive soil particles several tens of micrometers in size were collected from litter soil in the radiation contaminated area by the Fukushima nuclear plant accident and characterized using electron and X-ray microanalyses. The radioactive particles were discriminated by autoradiography using imaging plates (IP) on which microgrids were formed by laser ablation in order to find the particles under microscopy. Fifty radioactive particles were identified and classified into three types from their morphology and chemical composition, namely: (1) aggregates of clay minerals, (2) organic matter containing clay mineral particulates, and (3) weathered biotite originating from local granite. With respect to the second type, dissolution of the organic matter did not reduce the radiation, suggesting that the radionuclides were also fixed by the clay minerals. The weathered biotite grains have a plate-like shape with well-developed cleavages inside the grains, and kaolin group minerals and goethite filling the cleavage spaces. The reduction of the radiation intensity was measured before and after the trimming of the plate edges using a focused ion beam (FIB), to examine whether radioactive cesium primarily sorbed at frayed edges. The radiation was attenuated in proportion to the volume decrease by the edge trimming, implying that radioactive cesium was sorbed uniformly in the porous weathered biotite.

  8. Quantitative Digital Autoradiography for Environmental Swipe Sample Prioritization: System design, Characterization, and Initial Measurements

    Energy Technology Data Exchange (ETDEWEB)

    McDonald, Benjamin S.; Zalavadia, Mital A.; Miller, Brian W.; Bliss, Mary; Olsen, Khris B.; Kasparek, Dustin M.; Clarke, Ardelia M.

    2017-07-17

    Environmental sampling and sample analyses by the International Atomic Energy Agency’s (IAEA) Network of Analytical Laboratories (NWAL) is a critical technical tool used to detect facility misuse under a Comprehensive Safeguards Agreement and to verify the absence of undeclared nuclear material activities under an Additional Protocol. Currently all environmental swipe samples (ESS) are screened using gamma spectrometry and x-ray fluorescence to estimate the amount of U and/or Pu in the ESS, to guide further analysis, and to assist in the shipment of ESS to the NWAL. Quantitative Digital Autoradiography for Environmental Samples (QDARES) is being developed to complement existing techniques through the use of a portable, real-time, high-spatial-resolution camera called the Ionizing-radiation Quantum Imaging Detector (iQID). The iQID constructs a spatial map of radionuclides within a sample or surface in real-time as charged particles (betas) and photons (gamma/x-rays) are detected and localized on an event-by-event basis. Knowledge of the location and nature of radioactive hot spots on the ESS could provide information for subsequent laboratory analysis. As a nondestructive technique, QDARES does not compromise the ESS chain of custody or subsequent laboratory analysis. In this paper we will present the system design and construction, characterization measurements with calibration sources, and initial measurements of ESS.

  9. Statistical evaluation of methods for quantifying gene expression by autoradiography in histological sections

    Directory of Open Access Journals (Sweden)

    Lazic Stanley E

    2009-01-01

    Full Text Available Abstract Background In situ hybridisation (ISH combined with autoradiography is a standard method of measuring the amount of gene expression in histological sections, but the methods used to quantify gene expression in the resulting digital images vary greatly between studies and can potentially give conflicting results. Results The present study examines commonly used methods for analysing ISH images and demonstrates that these methods are not optimal. Image segmentation based on thresholding can be subject to floor-effects and lead to biased results. In addition, including the area of the structure or region of interest in the calculation of gene expression can lead to a large loss of precision and can also introduce bias. Finally, converting grey level pixel intensities to optical densities or units of radioactivity is unnecessary for most applications and can lead to data with poor statistical properties. A modification of an existing method for selecting the structure or region of interest is introduced which performs better than alternative methods in terms of bias and precision. Conclusion Based on these results, suggestions are made to reduce bias, increase precision, and ultimately provide more meaningful results of gene expression data.

  10. Ontogeny of phorbol ester receptors in rat brain studied by in vitro autoradiography

    International Nuclear Information System (INIS)

    Miyoshi, R.; Kito, S.

    1990-01-01

    The ontogeny of phorbol ester receptors, which have been considered to correspond to protein kinase C, in the rat brain was studied through in vitro autoradiography with 3 H-phorbol 12,13-dibutyrate ( 3 H-PDBu). The distribution of 3 H-PDBu binding sites in the adult rat brain was similar to the previous reports by other researchers. The developmental pattern of 3 H-PDBu binding sites varried with brain region. 3 H-PDBu binding sites in the amygdala, thalamus, stratum pyramidale of CA 1 of the hippocampus, dentate gyrus, superior colliculus, substantia nigra, interpeduncular nucleus and cerebellar molecular layer were postnatally increased to adult levels and after that they remained constant. On the other hand, in the stratum oriens and stratum radiatum of CA 1 of the hippocampus, and in the lateral and medial geniculate bodies, 3 H-PDBu binding sites reached peaks at 21 or 28 days of postnatal age and after that they declined to adult levels. The cerebellar granular layer showed a low level of 3 H-PDBu binding sites throughout all the ontogenetic stages. A distinct ontogenetic pattern of phorbol ester receptors in various regions of the brain may reflect a role of protein kinase C in the neural development of each discrete area. (Authors)

  11. Muscarinic cholinergic receptors subtypes in rat cerebellar cortex: light microscope autoradiography of age-related changes.

    Science.gov (United States)

    Tayebati, S K; Vitali, D; Scordella, S; Amenta, F

    2001-01-19

    Muscarinic cholinergic M1-M5 receptor subtypes were investigated in the cerebellar cortex of Fischer 344 rats aged 6 (young), 15 (adult) and 22 months (senescent) by combined kinetic and equilibrium binding and light microscope autoradiography. In young rats the rank order of receptor density was M5M4M4 in the molecular and granular layers, respectively. M1, M2, M4 and M5 receptors were also observed within Purkinje neurons. M1 receptor did not show age-related changes as well as the M2 receptor in the molecular layer. In this layer, M3-M5 receptors were increased in senescent compared to younger rats. In the granular layer the expression of M2 and M5 muscarinic receptors was similar in young and senescent rats and higher in adult rats. M3 and M4 receptors were more in adult and senescent rats compared to young animals. In Purkinje neurons, a slight-to-moderate age-related increase of M1 and M5 receptor expression was observed.

  12. Thallium-201: Autoradiography in pigmented mice and melanin-binding in vitro

    Energy Technology Data Exchange (ETDEWEB)

    Tjaelve, H.; Nilsson, M.; Larsson, B. (Uppsala Univ. (Sweden))

    1982-01-01

    Autoradiography with /sup 201/Tl/sup +/ in C57Bl mice showed a strong labelling of the eye melanin and of pigmented hair follicles. An analysis of the affinity of thallium for pigment from cow eyes indicated a binding to three groups of sites and showed a marked sensitivity to the addition of H/sup +/-ions. The results are consistent with the conception that a binding of thallium occurs to the free carboxyl groups of the melanin and that the structure of the polymer has a marked influence on the affinity. Similar results have previously been obtained with other cations. There was no indication that the strong in vivo affinity of thallium to melanin is due to a more firm binding than for other cations which do not localize on melanin in vivo. Instead, the ability of cations to pass the melanocyte membranes and reach the melanin granules is probably decisive for whether a melanin-binding will take place in vivo. Toxic effects on the eye and epilation are symptoms of thallium intoxication which may be related to its melanin-binding. The fate of /sup 201/Tl/sup +/ in some other tissues is also described and discussed.

  13. GaAs pixel radiation detector as an autoradiography tool for genetic studies

    Energy Technology Data Exchange (ETDEWEB)

    Bertolucci, E. [Physics Department, Universita' di Napoli Federico II and INFN, Napoli (Italy); Conti, M. [Physics Department, Universita' di Napoli Federico II and INFN, Napoli (Italy); Mettivier, G. [Physics Department, Universita' di Napoli Federico II and INFN, Napoli (Italy); Russo, P. [Physics Department, Universita' di Napoli Federico II and INFN, Napoli (Italy); Amendolia, S.R. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Bisogni, M.G. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Bottigli, U. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Ceccopieri, A. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Ciocci, M.A. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Delogu, P. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Fantacci, M.E. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Maestro, P. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Marzulli, V.M. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Pernigotti, E. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Romeo, N. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Rosso, V. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Stefanini, A. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy); Stumbo, S. [Physics Department, Universita' di Pisa and INFN, Pisa (Italy)

    1999-02-11

    We present an autoradiography tool to be used mainly for genetic studies. It performs a quantitative analysis of radioactivity and can follow a dynamic process. We designed several applications, in particular one aimed at detecting hybridization of radio-labeled DNA fragments with known DNA-probes deposited on a micro-array. The technique is based on GaAs pixel array detector and low threshold, large dynamic range and good sensitivity integrated electronics developed for medical applications, suitable to detect markers (gamma or beta) such as {sup 14}C, {sup 35}S, {sup 33}P, {sup 32}P, {sup 125}I, even at very low activities. A Monte Carlo simulation of {beta}{sup -} detection in GaAs is presented here in order to study the spatial resolution characteristics of such a system. For several biological applications, the electronics is required to perform at high temperatures (from 37 deg. to 68 deg. ): we present here studies of noise and minimum threshold as a function of the temperature.

  14. The distribution of a new /sup 111/In-Bleomycin complex in tumor cells by autoradiography

    International Nuclear Information System (INIS)

    Hou, D.Y.; Maruyama, Y.

    1987-01-01

    A new radioactive form of Bleomycin (/sup 111/In-BLMC) was effective for tumor imaging and therapy in mouse glioma and human small cell lung cancer (SCLC) cells. The distribution of drug in tumor cells was investigated by autoradiography. Human small cell lung cancer (N417 and H526, NCI) were exposed to /sup 111/ InCl/sub 3/ and (25-150 μCi/ml) or /sup 111/In-BLMC (25-150 μCi) carried by 15-25 μg BLM/ml) in 37 0 C for 1 hr, 3 hr or 24 hr, washed with fresh medium, and spread. The slides were smeared with NTB/sub 2/ or NTB/sub 3/ emulsion by using wet-mounting or dry-mounting technique and developed 3-14 days. The /sup 111/In-BLMC localized on the cell nucleus (47.8%) and nuclear membrane (29.2%); /sup 111/InCl/sub 3/ located mainly in the cytoplasm (45.8%). This indicates that the mechanism of killing of tumor cells may be related to the drug uptake and distribution of /sup 111/In-BLMC. A nuclear and nuclear membrane localization would favor damage to chromosomes and DNA

  15. GABA and benzodiazepine receptors in the gerbil brain after transient ischemia: demonstration by quantitative receptor autoradiography

    International Nuclear Information System (INIS)

    Onodera, H.; Sato, G.; Kogure, K.

    1987-01-01

    Quantitative receptor autoradiography was used to measure the binding of gamma-aminobutyric acid (GABA) and benzodiazepine receptors after ischemia by means of transient occlusion of bilateral common carotid arteries in the gerbil. [ 3 H]Muscimol was used to label the GABAA receptors and [ 3 H]flunitrazepam to label central type benzodiazepine receptors. In the superolateral convexities of the frontal cortices, [ 3 H]muscimol binding was increased in 60% of the animals killed 3 days after ischemia, and decreased in 67% of the animals killed 27 days after ischemia. Twenty-seven days after ischemia, [ 3 H]flunitrazepam binding in the substantia nigra pars reticulata increased to 252% of the control, though the increase in [ 3 H]muscimol binding was not significant. In the dorsolateral region of the caudate putamen, marked neuronal necrosis and depletion of both [ 3 H]muscimol and [ 3 H]flunitrazepam binding sites were observed 27 days after ischemia, the ventromedial region being left intact. In spite of the depletion of pyramidal cells in the CA1 region of the hippocampus, both [ 3 H]muscimol and [ 3 H]flunitrazepam binding sites were preserved 27 days after ischemia. Since our previous study revealed that adenosine A1 binding sites were depleted in the CA1 subfield of the hippocampus after ischemia correlating with neuronal damage, GABAA and benzodiazepine receptors may not be distributed predominantly on the pyramidal cells in the CA1 region

  16. Phytochemical investigation of crude methanol extracts of different species of Swertia from Nepal.

    Science.gov (United States)

    Khanal, Supreet; Shakya, Niroj; Thapa, Krishna; Pant, Deepak Raj

    2015-12-26

    The genus Swertia is reported to contain potent bitter compounds like iridoids, xanthones and c-glucoflavones that are known to heal many human disorders. In contrast to high ethnomedicinally valued Swertia chirayita, its other species have not been studied extensively, in spite of their common use in traditional medicinal system in Nepalese communities. So, the present study attempts to investigate the content of total polyphenols, flavonoids, antioxidant activity and estimate the rough content of amarogentin, swertiamarin and mangiferin from different species of Swertia from Nepalese Himalayas. Whole plant parts of S. chirayita (SCH), S. angustifolia (SAN), S. paniculata (SPA), S. racemosa (SRA), S. nervosa (SNE), S. ciliata (SCI) and S. dilatata (SDI) were collected; total phenolic and flavonoid contents were quantified spectrophotometrically and in vitro DPPH free radical scavenging assay was measured. Thin layer chromatography was performed on TLC aluminium plates pre-coated with silica gel for identification of swertiamarin, amarogentin and mangiferin from those species and semi quantitative estimation was done using GelQuant.NET software using their standard compounds. The phenolic content was highest in the methanol extract of SCH (67.49 ± 0.5 mg GAE/g) followed by SDI, SRA, SNE, SCI, SPA and SAN. The contents of flavonoids were found in the order of SCH, SPA, SRA, SNE, SDI, SCI and SAN. Promising concentration of phenolics and flavonoids produced promising DPPH free radical scavenging values. The IC50 values for the 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging test was lowest in SCH (23.35 ± 0.6 μg/ml), even lower than the standard ascorbic acid among the seven studied species. A significant correlation of 0.977 was observed between the polyphenol content and antioxidant values. The TLC profile showed the presence of all three major phytochemicals; amarogentin, swertiamarin and mangiferin in all of the plant samples. Among the seven studied

  17. Identification of proteins involved in the adhesionof Candida species to different medical devices.

    Science.gov (United States)

    Núñez-Beltrán, Arianna; López-Romero, Everardo; Cuéllar-Cruz, Mayra

    2017-06-01

    Adhesion is the first step for Candida species to form biofilms on medical devices implanted in the human host. Both the physicochemical nature of the biomaterial and cell wall proteins (CWP) of the pathogen play a determinant role in the process. While it is true that some CWP have been identified in vitro, little is known about the CWP of pathogenic species of Candida involved in adhesion. On this background, we considered it important to investigate the potential role of CWP of C. albicans, C. glabrata, C. krusei and C. parapsilosis in adhesion to different medical devices. Our results indicate that the four species strongly adher to polyvinyl chloride (PVC) devices, followed by polyurethane and finally by silicone. It was interesting to identify fructose-bisphosphate aldolase (Fba1) and enolase 1 (Eno1) as the CWP involved in adhesion of C. albicans, C. glabrata and C. krusei to PVC devices whereas phosphoglycerate kinase (Pgk) and Eno1 allow C. parapsilosis to adher to silicone-made implants. Results presented here suggest that these CWP participate in the initial event of adhesion and are probably followed by other proteins that covalently bind to the biomaterial thus providing conditions for biofilm formation and eventually the onset of infection. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. Antimicrobial resistance and resistance gene determinants in clinical Escherichia coli from different animal species in Switzerland.

    Science.gov (United States)

    Lanz, Roland; Kuhnert, Peter; Boerlin, Patrick

    2003-01-02

    Antimicrobial susceptibility testing was performed on a total of 581 clinical Escherichia coli isolates from diarrhea and edema disease in pigs, from acute mastitis in dairy cattle, from urinary tract infections in dogs and cats, and from septicemia in laying hens collected in Switzerland between 1999 and 2001. Among the 16 antimicrobial agents tested, resistance was most frequent for sulfonamides, tetracycline, and streptomycin. Isolates from swine presented significantly more resistance than those from the other animal species. The distribution of the resistance determinants for sulfonamides, tetracycline, and streptomycin was assessed by hybridization and PCR in resistant isolates. Significant differences in the distribution of resistance determinants for tetracycline (tetA, tetB) and sulfonamides (sulII) were observed between the isolates from swine and those from the other species. Resistance to sulfonamides could not be explained by known resistance mechanisms in more than a quarter of the sulfonamide-resistant and sulfonamide-intermediate isolates from swine, dogs and cats. This finding suggests that one or several new resistance mechanisms for sulfonamides may be widespread among E. coli isolates from these animal species. The integrase gene (intI) from class I integrons was detected in a large proportion of resistant isolates in association with the sulI and aadA genes, thus demonstrating the importance of integrons in the epidemiology of resistance in clinical E. coli isolates from animals.

  19. Prevalence of avian trichomoniasis in different species of pigeons in Mosul

    Directory of Open Access Journals (Sweden)

    H. S. Al-Bakry

    2009-01-01

    Full Text Available The current study was carried out to determine the prevalence of avian trichomoniasis in different species of pigeons in Mosul city during 2005-2007. In addition, the work aimed to investigate the effects of possible relationships between age, sex, season of the year, weight and health status on the incidence of the disease. Three species of pigeons were included viz, stock dove (Columba oenas, rock mountain dove (C. livia, and collared doves (Streptopelia decaocto.Examination of 250, 200 and 40 doves of the three fore–mentioned groups of birds indicated prevalence rates of 22%, 17.5% and 10%, for the three species, respectively. High infection rates were reported in squabs of all birds of the three groups. Regarding the effect of sex on the infection rate, the results revealed high percentage of infection were seen in male stock doves and female rock doves in comparison with their counterparts, however similar rates were observed in both sexes of collared doves. Also, it was found that there was an impact of season of the year on the prevalence rates of the parasite, so the infection was increased in spring and winter more than other seasons, for all birds studied. Depending upon our findings, factors such as body weight and health status have no effects on incidence of the disease.

  20. Yeast species composition differs between artisan bakery and spontaneous laboratory sourdoughs.

    Science.gov (United States)

    Vrancken, Gino; De Vuyst, Luc; Van der Meulen, Roel; Huys, Geert; Vandamme, Peter; Daniel, Heide-Marie

    2010-06-01

    Sourdough fermentations are characterized by the combined activity of lactic acid bacteria and yeasts. An investigation of the microbial composition of 21 artisan sourdoughs from 11 different Belgian bakeries yielded 127 yeast isolates. Also, 12 spontaneous 10-day laboratory sourdough fermentations with daily backslopping were performed with rye, wheat, and spelt flour, resulting in the isolation of 217 yeast colonies. The isolates were grouped according to PCR-fingerprints obtained with the primer M13. Representative isolates of each M13 fingerprint group were identified using the D1/D2 region of the large subunit rRNA gene, internal transcribed spacer sequences, and partial actin gene sequences, leading to the detection of six species. The dominant species in the bakery sourdoughs were Saccharomyces cerevisiae and Wickerhamomyces anomalus (formerly Pichia anomala), while the dominant species in the laboratory sourdough fermentations were W. anomalus and Candida glabrata. The presence of S. cerevisiae in the bakery sourdoughs might be due to contamination of the bakery environment with commercial bakers yeast, while the yeasts in the laboratory sourdoughs, which were carried out under aseptic conditions with flour as the only nonsterile component, could only have come from the flour used.

  1. Dissolution and degradation of crude oil droplets by different bacterial species and consortia by microcosm microfluidics

    Science.gov (United States)

    Jalali, Maryam; Sheng, Jian

    2017-11-01

    Bacteria are involved in cleanup and degradation of crude oil in polluted marine and soil environments. A number of bacterial species have been identified for consuming petroleum hydrocarbons with diverse metabolic capabilities. We conducted laboratory experiments to investigate bacterial consumption by monitoring the volume change to oil droplets as well as effects of oil droplet size on this process. To conduct our study, we developed a micro-bioassay containing an enclosed chamber with bottom substrate printed with stationary oil microdroplets and a digital holographic interferometer (DHI). The morphology of microdroplets was monitored in real time over 100 hours and instantaneous flow field was also measured by digital holographic microscope. The substrates with printed oil droplets were further evaluated with atomic force microscopy (AFM) at the end of each experiment. Three different bacteria species, Pseudomonas sp, Alcanivorax borkumensis, and Marinobacter hydrocarbonoclasticus, as well as six bacterial consortia were used in this study. The results show that droplets smaller than 20µm in diameter are not subject to bacterial degradation and the volume of droplet did not change beyond dissolution. Substantial species-specific behaviors have been observed in isolates. The experiments of consortia and various flow shears on biodegradation and dissolution are ongoing and will be reported.

  2. A comparative review of Toll-like receptor 4 expression and functionality in different animal species

    Directory of Open Access Journals (Sweden)

    Céline eVAURE

    2014-07-01

    Full Text Available Toll-like receptors (TLRs belong to the pattern recognition receptor (PRR family, a key component of the innate immune system. TLRs detect invading pathogens and initiate an immediate immune response to them, followed by a long-lasting adaptive immune response. Activation of TLRs leads to the synthesis of pro-inflammatory cytokines and chemokines and the expression of co-stimulatory molecules. TLR4 specifically recognizes bacterial lipopolysaccharide (LPS, along with several other components of pathogens and endogenous molecules produced during abnormal situations, such as tissue damage. Evolution across species can lead to substantial diversity in the TLR4’s affinity and specificity to its ligands, the TLR4 gene and cellular expression patterns and tissue distribution. Consequently, TLR4 functions vary across different species. In recent years, the use of synthetic TLR agonists as adjuvants has emerged as a realistic therapeutic goal, notably for the development of vaccines against poorly immunogenic targets. Given that an adjuvanted vaccine must be assessed in pre-clinical animal models before being tested in humans, the extent to which an animal model represents and predicts the human condition is of particular importance. This review focuses on the current knowledge on the critical points of divergence between human and the mammalian species commonly used in vaccine research and development (non-human primate, mouse, rat, rabbit, swine and dog, in terms of molecular, cellular and functional properties of TLR4.

  3. Significant difference in mycorrhizal specificity between an autotrophic and its sister mycoheterotrophic plant species of Petrosaviaceae.

    Science.gov (United States)

    Yamato, Masahide; Ogura-Tsujita, Yuki; Takahashi, Hiroshi; Yukawa, Tomohisa

    2014-11-01

    Petrosaviaceae is a monocotyledonous plant family that comprises two genera: the autotrophic Japonolirion and the mycoheterotrophic Petrosavia. Accordingly, this plant family provides an excellent system to examine specificity differences in mycobionts between autotrophic and closely related mycoheterotrophic plant species. We investigated mycobionts of Japonolirion osense, the sole species of the monotypic genus, from all known habitats of this species by molecular identification and detected 22 arbuscular mycorrhizal (AM) fungal phylotypes in Archaesporales, Diversisporales, and Glomerales. In contrast, only one AM fungal phylotype in Glomerales was predominantly detected from the mycoheterotrophic Petrosavia sakuraii in a previous study. The high mycobiont diversity in J. osense and in an outgroup plant, Miscanthus sinensis (Poaceae), indicates that fungal specificity increased during the evolution of mycohetrotrophy in Petrosaviaceae. Furthermore, some AM fungal sequences of J. osense showed >99% sequence similarity to the dominant fungal phylotype of P. sakuraii, and one of them was nested within a clade of P. sakuraii mycobionts. These results indicate that fungal partners are not necessarily shifted, but rather selected for in the course of the evolution of mycoheterotrophy. We also confirmed the Paris-type mycorrhiza in J. osense.

  4. Different culture media containing methyldopa for melanin production by Cryptococcus species

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    Ralciane de Paula Menezes

    2011-10-01

    Full Text Available INTRODUCTION: Melanin production by species of Cryptococcus is widely used to characterize C. neoformans complex in mycology laboratories. This study aims to test the efficacy of methyldopa from pharmaceutical tablet as a substrate for melanin production, to compare the production of melanin using different agar base added with methyldopa, and to compare the melanin produced in those media with that produced in Niger seed agar and sunflower seed agar by C. neoformans, C. laurentii, and C. albidus. Two isolates of each species, C. neoformans, C. laurentii, and C. albidus, and one of Candida albicans were used to experimentally detect conditions for melanin production. METHODS: The following media were tested: Mueller-Hinton agar (MHA, brain and heart infusion agar (BHIA, blood agar base (BAB, and minimal medium agar (MMA, all added with methyldopa, and the media Niger seed agar (NSA and sunflower seed agar (SSA. RESULTS: All isolates grew in most of the culture media after 24h. Strains planted on media BAB and BHIA showed growth only after 48h. All isolates produced melanin in MMA, MHA, SSA, and NSA media. CONCLUSIONS: Methyldopa in the form pharmaceutical tablet can be used as a substrate for melanin production by Cryptococcus species; minimal medium plus methyldopa was more efficient than the BAB, MHA, and BHIA in the melanin production; and NSA and SSA, followed by MMA added with methyldopa, were more efficient than other media studied for melanin production by all strains studied.

  5. Comparison of chemical components and antioxidants capacity of different Echinacea species.

    Science.gov (United States)

    Sloley, B D; Urichuk, L J; Tywin, C; Coutts, R T; Pang, P K; Shan, J J

    2001-06-01

    Alcoholic extracts of the roots and leaves of three Echinacea species (E. purpurea, E. angustifolia and E. pallida) were analysed for the presence of characteristic chemicals by HPLC directly coupled to ultraviolet absorbance and electrospray mass spectrometric detectors. The method permitted rapid characterization and tentative identification of a large number of caffeoyl conjugates and alkamides in all the samples investigated. The roots of the three species differed markedly in their contents of characteristic compounds. Cichoric acid and verbascoside predominated in extracts of E. purpurea root whereas cynarine and dodeca-2E,4E,8Z,10Z/E-tetraenoic acid isobutylamide were the major chemicals characteristic of E. angustifolia root extracts. Echinacoside and 6-O-caffeoylechinacoside predominated in extracts of E. pallida roots. Characteristic alkamides were also examined by electrospray tandem mass spectrometry (MS/MS) and these compounds provided characteristic fragmentation patterns. Extracts of the roots and leaves of all three species were found to have antioxidant properties in a free radical scavenging assay and in a lipid peroxidation assay.

  6. Defensive behaviors of the Oriental armywormMythimna separatain response to different parasitoid species (Hymenoptera: Braconidae).

    Science.gov (United States)

    Zhou, Jincheng; Meng, Ling; Li, Baoping

    2017-01-01

    This study examined defensive behaviors of Mythimna separata (Lepidoptera: Noctuidae) larvae varying in body size in response to two parasitoids varying in oviposition behavior; Microplitis mediator females sting the host with the ovipositor after climbing onto it while Meteorus pulchricornis females make the sting by standing at a close distance from the host. Mythimna separata larvae exhibited evasive (escaping and dropping) and aggressive (thrashing) behaviors to defend themselves against parasitoids M. mediator and M. pulchricornis . Escaping and dropping did not change in probability with host body size or parasitoid species. Thrashing did not vary in frequency with host body size, yet performed more frequently in response to M. mediator than to M. pulchricornis . Parasitoid handling time and stinging likelihood varied depending not only on host body size but also on parasitoid species. Parasitoid handling time increased with host thrashing frequency, similar in slope for both parasitoids yet on a higher intercept for M. mediator than for M. pulchricornis . Handling time decreased with host size for M. pulchricornis but not for M. mediator . The likelihood of realizing an ovipositor sting decreased with thrashing frequency of both small and large hosts for M. pulchricornis , while this was true only for large hosts for M. mediator . Our results suggest that the thrashing behavior of M. separata larvae has a defensive effect on parasitism, depending on host body size and parasitoid species with different oviposition behaviors.

  7. Geographic variation of melanisation patterns in a hornet species: genetic differences, climatic pressures or aposematic constraints?

    Directory of Open Access Journals (Sweden)

    Adrien Perrard

    Full Text Available Coloration of stinging insects is often based on contrasted patterns of light and black pigmentations as a warning signal to predators. However, in many social wasp species, geographic variation drastically modifies this signal through melanic polymorphism potentially driven by different selective pressures. To date, surprisingly little is known about the geographic variation of coloration of social wasps in relation to aposematism and melanism and to genetic and developmental constraints. The main objectives of this study are to improve the description of the colour variation within a social wasp species and to determine which factors are driving this variation. Therefore, we explored the evolutionary history of a polymorphic hornet, Vespa velutina Lepeletier, 1836, using mitochondrial and microsatellite markers, and we analysed its melanic variation using a colour space based on a description of body parts coloration. We found two main lineages within the species and confirmed the previous synonymy of V. auraria Smith, 1852, under V. velutina, differing only by the coloration. We also found that the melanic variation of most body parts was positively correlated, with some segments forming potential colour modules. Finally, we showed that the variation of coloration between populations was not related to their molecular, geographic or climatic differences. Our observations suggest that the coloration patterns of hornets and their geographic variations are determined by genes with an influence of developmental constraints. Our results also highlight that Vespa velutina populations have experienced several convergent evolutions of the coloration, more likely influenced by constraints on aposematism and Müllerian mimicry than by abiotic pressures on melanism.

  8. Zinc Oxide (ZnO) nanoparticles toxic potency on different microalgae species

    Science.gov (United States)

    Aravantinou, Andriana F.; Tsarpali, Vasiliki; Dailianis, Stefanos; Manariotis, Ioannis D.

    2013-04-01

    Nanoparticles are widely used in many products such as cosmetics, material coatings, and pigments and they are released into enviroment. Recently, nanoparticles have been found in municipal wastewater and wastewater treatment plants, which are consequently discharged to receiving bodies. Since their versatile use and application is increasing, their environmental impact is of great concern and needs to be clarified. The aim of this work was to investigate the effect of nanoparticles on aquatic species, such as unicellular microalgae. This is considered as a necessary step in order to assess their impact on coastal food chain and the ecosystems that they support as well as on natural wastewater treatment systems. More specifically, the potential toxic effects of ZnO nanoparticles (ZnO NPs) on three aquatic organisms, Dunaliella tertiolecta, Tetraselmis suesica, and Chlorococcum sp. were investigated. The microalgae species exposed to different periods of time (24, 48, 72 and 96 h) and different concentrations of ZnO NPs (1 to 100 μM, 1 to10 mM), and showed significant differences on their growth rates. Algae exposed to ZnO NPs concentrations from 1 to 100 μΜ exhibited increased levels of the half maximum inhibitory concentration values (IC50) in all cases, while at higher concentrations (from 1 to 10 mM) algae showed excessive lysis, probably due to disturbances occurred in cellular structure and function. According to the results of the present study, ZnO nanoparticles appeared to have toxic effects on all species tested, showing type- and time-dependent alterations.

  9. Clever strategists: Australian Magpies vary mobbing strategies, not intensity, relative to different species of predator.

    Science.gov (United States)

    Koboroff, A; Kaplan, G; Rogers, Lj

    2013-01-01

    Anti-predator behaviour of magpies was investigated, using five species of model predators, at times of raising offspring. We predicted differences in mobbing strategies for each predator presented and also that raising juveniles would affect intensity of the mobbing event. Fourteen permanent resident family groups were tested using 5 different types of predator (avian and reptilian) known to be of varying degrees of risk to magpies and common in their habitat. In all, 210 trials were conducted (across three different stages of juvenile development). We found that the stage of juvenile development did not alter mobbing behaviour significantly, but predator type did. Aerial strategies (such as swooping) were elicited by taxidermic models of raptors, whereas a taxidermic model of a monitor lizard was approached on the ground and a model snake was rarely approached. Swooping patterns also changed according to which of the three raptors was presented. Our results show that, in contrast to findings in other species, magpies vary mobbing strategy depending on the predator rather than varying mobbing intensity.

  10. Clever strategists: Australian Magpies vary mobbing strategies, not intensity, relative to different species of predator

    Directory of Open Access Journals (Sweden)

    A Koboroff

    2013-03-01

    Full Text Available Anti-predator behaviour of magpies was investigated, using five species of model predators, at times of raising offspring. We predicted differences in mobbing strategies for each predator presented and also that raising juveniles would affect intensity of the mobbing event. Fourteen permanent resident family groups were tested using 5 different types of predator (avian and reptilian known to be of varying degrees of risk to magpies and common in their habitat. In all, 210 trials were conducted (across three different stages of juvenile development. We found that the stage of juvenile development did not alter mobbing behaviour significantly, but predator type did. Aerial strategies (such as swooping were elicited by taxidermic models of raptors, whereas a taxidermic model of a monitor lizard was approached on the ground and a model snake was rarely approached. Swooping patterns also changed according to which of the three raptors was presented. Our results show that, in contrast to findings in other species, magpies vary mobbing strategy depending on the predator rather than varying mobbing intensity.

  11. Sexual differences in prevalence of a new species of trypanosome infecting túngara frogs

    Directory of Open Access Journals (Sweden)

    Ximena E. Bernal

    2016-04-01

    Full Text Available Trypanosomes are a diverse group of protozoan parasites of vertebrates transmitted by a variety of hematophagous invertebrate vectors. Anuran trypanosomes and their vectors have received relatively little attention even though these parasites have been reported from frog and toad species worldwide. Blood samples collected from túngara frogs (Engystomops pustulosus, a Neotropical anuran species heavily preyed upon by eavesdropping frog-biting midges (Corethrella spp., were examined for trypanosomes. Our results revealed sexual differences in trypanosome prevalence with female frogs being rarely infected (<1%. This finding suggests this protozoan parasite may be transmitted by frog-biting midges that find their host using the mating calls produced by male frogs. Following previous anuran trypanosome studies, we examined 18S ribosomal RNA gene to characterize and establish the phylogenetic relationship of the trypanosome species found in túngara frogs. A new species of giant trypanosome, Trypanosoma tungarae n. sp., is described in this study. Overall the morphometric data revealed that the trypomastigotes of T. tungarae n. sp. are similar to other giant trypanosomes such as Trypanosoma rotatorium and Trypanosoma ranarum. Despite its slender and long cell shape, however, 18S rRNA gene sequences revealed that T. tungarae n. sp. is sister to the rounded-bodied giant trypanosome, Trypanosoma chattoni. Therefore, morphological convergence explains similar morphology among members of two non-closely related groups of trypanosomes infecting frogs. The results from this study underscore the value of coupling morphological identification with molecular characterization of anuran trypanosomes.

  12. Out of the ground: two coexisting fossorial toad species differ in their emergence and movement patterns.

    Science.gov (United States)

    Székely, Diana; Cogălniceanu, Dan; Székely, Paul; Denoël, Mathieu

    2017-04-01

    Understanding the way species with similar niches can coexist is a challenge in ecology. The niche partitioning hypothesis has received much support, positing that species can exploit available resources in different ways. In the case of secretive species, behavioural mechanisms of partitioning are still poorly understood. This is especially true for fossorial frogs because individuals hide underground by day and are active only during the night. We investigated the nocturnal activity and tested the niche partitioning hypothesis in two syntopic fossorial spadefoot toads (Pelobates fuscus and Pelobates syriacus) by examining interspecific variation in emergence from the soil. We employed a night vision recording system combined with video tracking analyses in a replicated laboratory setting to quantify individual movement patterns, a procedure that has not been used until now to observe terrestrial amphibians. Most individuals appeared on the surface every night and returned to their original burrow (about 60% of the times), or dug a new one around morning. There was a large temporal overlap between the two species. However, P. syriacus was significantly more active than P. fuscus in terms of total distance covered and time spent moving, while P. fuscus individuals left their underground burrow more frequently than P. syriacus. Consequently, P. fuscus adopted more of a sit-and-wait behaviour compared to P. syriacus, and this could facilitate their coexistence. The use of night video tracking technologies offered the advantage of individually tracking these secretive organisms during their nocturnal activity period and getting fine-grained data to understand their movement patterns. Copyright © 2016 Elsevier GmbH. All rights reserved.

  13. Application of ovine luteinizing hormone (LH) radioimmunoassay in the quantitation of LH in different mammalian species

    International Nuclear Information System (INIS)

    Millar, R.P.; Aehnelt, C.

    1977-01-01

    A sensitive double antibody radioimmunoassay has been developed for measuring luteinizing hormone (LH) in various African mammalian species, using rabbit anti-ovine LH serum (GDN 15) and radioiodinated rat LH or ovine LH. Serum and pituitary homogenates from some African mammals (hyrax, reedbuck, sable, impala, tsessebe, thar, spring-hare, ground squirrel and cheetah, as well as the domestic sheep, cow and horse and laboratory rat and hamster) produced displacement curves parallel to that of the ovine LH standards. The specificity of the assay was examined in detail for one species, the rock hyrax. Radioimmunoassay and bioassay estimates of LH in hyrax pituitaries containing widely differing quantities of pituitary hormones were similar. In sexually active male hyrax mean plasma LH was 12.1 ng/ml and pituitary LH 194 μg/gland, but in sexually quiescent hyrax mean plasma LH was 2.4 ng/ml and mean pituitary LH 76 μg/gland. Intravenous injection of 10 μg of luteinizing hormone releasing hormone increased mean LH levels in hyrax from 0.9 ng/ml to 23.2 ng/ml by 30 min. Conversely, im injection of 250 μg testosterone induced a fall in LH levels in male hyrax from 1.7 ng/ml to 0.7 ng/ml 6 h after administration. Although the specificity of the assay for quantitating plasma LH in other species was not categorically established, there was a good correlation between plasma LH concentration and reproductive state in the bontebok, impala, spring-hare, thar, cheetah, domestic horse and laboratory rat, suggesting the potential use of the antiserum in quantitating LH in a variety of mammalian species

  14. Differences between regional and biogeographic species pools highlight the need for multi-scale theories in macroecology

    Directory of Open Access Journals (Sweden)

    Falko Buschke

    2014-12-01

    Full Text Available Ecologists are intrigued by the manner in which colonists from a regional pool of species establish and structure local ecological communities. This has initiated several approaches to identifying the relative roles of regional and local processes. Recently, large-scale data sets and novel statistical tools have sparked renewed interest in objectively defined homogeneous species pools. At continental and global scales, these homogenous units are known as biogeographic species pools. Here we argue that the biogeographic species pool is not just a scaled-up version of the regional species pool featured in many foundational ecological theories. Instead, the processes linking local communities and regional species pools differ from those in the biogeographic species pool. To illustrate this, we distinguish between regional and biogeographic species pools by overlaying species distribution data and differentiat- ing between the intersection and union of these distributions. Although patterns in the regional and biogeographic species pools may appear self-similar across scales, the underlying mechanisms differ from those between local communities and the regional species pool. As a consequence, conventional approaches of quantifying the relative role of local and regional process are inappropriate for studying the biogeographic species pool, thus highlighting the need for new multi-scale theories in macroecology.

  15. Varying demographic impacts of different fisheries on three Mediterranean seabird species.

    Science.gov (United States)

    Genovart, Meritxell; Doak, Daniel F; Igual, José-Manuel; Sponza, Stefano; Kralj, Jelena; Oro, Daniel

    2017-08-01

    Fisheries have an enormous economic importance, but reconciling their socio-economic features with the conservation and sustainability of marine ecosystems presents major challenges. Bycatch mortality from fisheries is clearly among the most serious global threats for marine ecosystems, affecting a wide range of top predators. Recent estimates report ca. 200,000 seabirds killed annually by bycatch in European waters. However, there is an urgent need to rigorously estimate actual mortality rates and quantify effects of bycatch on populations. The Mediterranean Sea is one of the most impacted regions. Here, we estimate for the first time both bycatch mortality rates and their population-level effects on three endemic and vulnerable Mediterranean taxa: Scopoli's shearwater, Mediterranean shag, and Audouin's gull, that die in different types of fishing gears: longlines, gillnets and sport trolling, respectively. We use multi-event capture-recapture modelling to estimate crucial demographic parameters, including the probabilities of dying in different fishing gears. We then build stochastic demography models to forecast the viability of the populations under different management scenarios. Longline bycatch was particularly severe for adults of Scopoli's shearwaters and Audouin's gulls (ca. 28% and 23% of total mortality, respectively) and also for immature gulls (ca. 90% of mortality). Gillnets had a lower impact, but were still responsible for ca. 9% of juvenile mortality on shags, whereas sport trolling only slightly influenced total mortality in gulls. Bycatch mortality has high population-level impacts in all three species, with shearwaters having the highest extinction risk under current mortality rates. Different life-history traits and compensatory demographic mechanisms between the three species are probably influencing the different bycatch impact: for shearwaters, urgent conservation actions are required to ensure the viability of their populations. Results

  16. [Spatial differences of Chinese material medicine resources species in Jilin province].

    Science.gov (United States)

    Zhang, Xiao-Bo; Qiu, Zhi-Dong; Wang, Hui; Jing, Zhi-Xian; Guo, Lan-Ping; Qu, Xiao-Bo; Huang, Lu-Qi

    2017-11-01

    The differences in the spatial distribution of regional Chinese material medicine resources between regions are determined by differences in natural conditions and social resources among different regions. Spatiotemporal evolution of the distribution of Chinese material medicine resources is a manifestation of the development process of Chinese medicine industry in time and space. The spatiotemporal evolution of the distribution of regional Chinese material medicine resources can reveal the regularity of spatial distribution of Chinese material medicine resources. County as the basic unit of the national material medicine resources census, the difference of resource endowment is of great significance to the rational development of Chinese material medicine resources policy and the coordinated development of regional resources and environment. Based on the results of the pilot project of Jilin province, this study selected 51 counties that had completed the census of Chinese material medicine resources. According to the species of Chinese material medicine resources, we explored the diversity of Chinese material medicine resources in Jilin province by using statistical data analysis (ESDA), trend surface analysis and spatial variability function to analyze the spatial differences of Chinese material medicine resources. Chinese material medicine resources are distributed in the eastern and southeastern part of Jilin province, mostly in the Changbai Mountains. The species of Chinese material medicine resources tend to be low-value spatial aggregation; the overall cold spots are located in Changchun and Jilin city, near the administrative center, mostly urban built-up area. The rich areas of Chinese material medicine resources are rich in hot spots, mainly in broad-leaved forest. The low-abundance of Chinese material medicine resources is dominated by cultivated vegetation. Copyright© by the Chinese Pharmaceutical Association.

  17. Evaluation of different enrichment methods for pathogenic Yersinia species detection by real time PCR

    Science.gov (United States)

    2014-01-01

    Background Yersiniosis is a zoonotic disease reported worldwide. Culture and PCR based protocols are the most common used methods for detection of pathogenic Yersinia species in animal samples. PCR sensitivity could be increased by an initial enrichment step. This step is particularly useful in surveillance programs, where PCR is applied to samples from asymptomatic animals. The aim of this study was to evaluate the improvement in pathogenic Yersinia species detection using a suitable enrichment method prior to the real time PCR (rtPCR). Nine different enrichment protocols were evaluated including six different broth mediums (CASO, ITC, PSB, PBS, PBSMSB and PBSSSB). Results The analysis of variance showed significant differences in Yersinia detection by rtPCR according to the enrichment protocol used. These differences were higher for Y. pseudotuberculosis than for Y. enterocolitica. In general, samples incubated at lower temperatures yielded the highest detection rates. The best results were obtained with PBSMSB and PBS2. Application of PBSMSB protocol to free-ranging wild board samples improved the detection of Y. enterocolitica by 21.2% when compared with direct rtPCR. Y. pseudotuberculosis detection was improved by 10.6% when results obtained by direct rtPCR and by PBSMSB enrichment before rtPCR were analyzed in combination. Conclusions The data obtained in the present study indicate a difference in Yersinia detection by rtPCR related to the enrichment protocol used, being PBSMSB enrichment during 15 days at 4°C and PBS during 7 days at 4°C the most efficient. The use of direct rtPCR in combination with PBSMSB enrichment prior to rtPCR resulted in an improvement in the detection rates of pathogenic Yersinia in wild boar and could be useful for application in other animal samples. PMID:25168886

  18. Comparison of grouper infection with two different iridoviruses using transcriptome sequencing and multiple reference species selection.

    Science.gov (United States)

    Liu, Chun-Cheng; Ho, Li-Ping; Yang, Cin-Hang; Kao, Tsung-Yu; Chou, Hsin-Yiu; Pai, Tun-Wen

    2017-12-01

    Due to high-density aquafarming in Taiwan, groupers are commonly infected with two different iridoviruses: Megalocytivirus (grouper iridovirus of Taiwan, TGIV) and Ranavirus (grouper iridovirus, GIV). Iridoviral diseases cause mass mortality, and surviving fish retain these pathogens, which can then be horizontally transferred. These viruses have therefore become a major challenge for grouper aquaculture. In this study, comparisons of the biological responses of groupers to infection with these two different iridoviruses were performed. A novel approach for transcriptomic analysis was proposed to enhance the discovery of differentially expressed genes and associated biological pathways. In this method, suitable and available reference species are selected from the NCBI taxonomy tree and the Ensembl and KEGG databases instead of either choosing only one model species or adopting the NCBI non-redundant dataset as references. Our results show that selection of multiple appropriate model species as references increases the efficiency and performance of analyses compared to those of traditional approaches. Using this method, 17 shared pathways and 5 specific pathways were found to be significantly differentially expressed following infection with the two iridoviruses, among which 11 pathways were additionally identified based on the proposed method of multiple reference species selection. Among the pathways responsive to infection with a specific iridovirus, the spliceosomal pathway (ko03040; p-value = 0.0011) was exclusively associated with TGIV infection, while the glycolysis/gluconeogenesis pathway (ko00010; p-value = 0.0032) was associated with GIV infection. These findings and designed corresponding biological experiments may facilitate a deeper understanding of the mechanisms by which both TGIV and GIV cause fatal infections, as well as the ways in which they induce different pathologies and symptoms. We believe that the proposed novel mechanism for de novo

  19. Non-coding changes cause sex-specific wing size differences between closely related species of Nasonia

    NARCIS (Netherlands)

    Loehlin, David W.; Oliveira, Deodoro C. S. G.; Edwards, Rachel; Giebel, Jonathan D.; Clark, Michael E.; Cattani, M. Victoria; van de Zande, Louis; Verhulst, Eveline C.; Beukeboom, Leo W.; Munoz-Torres, Monica; Werren, John H.

    The genetic basis of morphological differences among species is still poorly understood. We investigated the genetic basis of sex-specific differences in wing size between two closely related species of Nasonia by positional cloning a major male-specific locus, wing-size1 (ws1). Male wing size

  20. Mixed function oxidase dependent biotransformation of polychlorinated biphenyls by different species of fish from the North Sea

    DEFF Research Database (Denmark)

    Mehrtens, G.; Laturnus, F.

    1999-01-01

    Mixed function oxidase (MFO) dependent biotransformation of polychlorinated biphenyls (PCBs) was measured in three different fish species from the North Sea. Liver microsomes of plaice (Pleuronectes platessa), dab (Limanda limanda) and cod (Gadus morhua) were isolated and incubated with different....... Biotransformations were also species dependent. The flatfish dab and plaice exhibited higher metabolic rates than cod (C) 1999 Elsevier Science Ltd. All rights reserved....

  1. Hydraulic architecture of two species differing in wood density: opposing strategies in co-occurring tropical pioneer trees

    Science.gov (United States)

    Katherine A. McCulloh; Daniel M. Johnson; Frederick C. Meinzer; Steven L. Voelker; Barbara Lachenbruch; Jean-Christophe. Domec

    2012-01-01

    Co-occurring species often have different strategies for tolerating daily cycles of water stress. One underlying parameter that can link together the suite of traits that enables a given strategy is wood density. Here we compare hydraulic traits of two pioneer species from a tropical forest in Panama that differ in wood density: Miconia argentea...

  2. Species richness and relative species abundance of Nymphalidae (Lepidoptera in three forests with different perturbations in the North-Central Caribbean of Costa Rica

    Directory of Open Access Journals (Sweden)

    Carolyn Stephen

    2014-09-01

    Full Text Available Measurements of species richness and species abundance can have important implications for regulations and conservation. This study investigated species richness and abundance of butterflies in the family Nymphalidae at undisturbed, and disturbed habitats in Tirimbina Biological Reserve and Nogal Private Reserve, Sarapiquí, Costa Rica. Traps baited with rotten banana were placed in the canopy and the understory of three habitats: within mature forest, at a river/forest border, and at a banana plantation/forest border. In total, 71 species and 487 individuals were caught and identified during May and June 2011 and May 2013. Species richness and species abundance were found to increase significantly at perturbed habitats (p<0.0001, p<0.0001, respectively. The edge effect, in which species richness and abundance increase due to greater complementary resources from different habitats, could be one possible explanation for increased species richness and abundance. Rev. Biol. Trop. 62 (3: 919-928. Epub 2014 September 01.

  3. Determination of Glutathione, Selenium, and Malondialdehyde in Different Edible Mushroom Species.

    Science.gov (United States)

    Dogan, Hacer; Coteli, Ebru; Karatas, Fikret

    2016-12-01

    In this study, the amount of reduced glutathione (GSH), oxidized glutathione (GSSG), and malondialdehyde (MDA) were determined by high performance liquid chromatography (HPLC), and selenium was determined by using the fluorescence spectrophotometer in eight different species of edible mushrooms. Brittlegill mushroom (Russula delica), meadow mushroom (Agaricus campestris), dryad's saddle mushroom (Polyporus squamosus), white button mushroom (Agaricus bisporus), Pleurotus spp., ink mushroom (Coprinus atramentarius), ebekari mushroom (slimy) (Elazığ local) and çaşır mushroom (Pleurotus eryngii) (Tunceli local) were used for analysis. The amounts of GSH, GSSG, Se, and MDA with GSH/GSSG ratio in the eight different species of edible mushrooms were observed in between 269.10 ± 16.94-1554.83 ± 58.12 μg/g; 23.55 ± 1.89-841.90 ± 20.03 μg/g; 15.06 ± 1.56-82.10 ± 3.84 μg/g; 5.46 ± 0.50-27.45 ± 2.58 μg/g wet weight and 0.32-41.35, respectively. There is a weak correlation (R 2  = 0.389) between MDA and Se, on the other hand, the correlation (R 2  = 0.831) between GSH/GSSG ratio and selenium in mushrooms are reasonable well. In a similar manner, there is a weak correlation (R 2  = 0551) between GSH/GSSG and MDA ratios in mushrooms. It was found that these edible mushroom species are good source of glutathione (GSH, GSSG), and selenium (Se) in terms of quantities obtained; therefore, it can be said that mushrooms are a rich source of antioxidants.

  4. Molecular Assortment of Lens Species with Different Adaptations to Drought Conditions Using SSR Markers.

    Directory of Open Access Journals (Sweden)

    Dharmendra Singh

    Full Text Available The success of drought tolerance breeding programs can be enhanced through molecular assortment of germplasm. This study was designed to characterize molecular diversity within and between Lens species with different adaptations to drought stress conditions using SSR markers. Drought stress was applied at seedling stage to study the effects on morpho-physiological traits under controlled condition, where tolerant cultivars and wilds showed 12.8-27.6% and 9.5-23.2% reduction in seed yield per plant respectively. When juxtaposed to field conditions, the tolerant cultivars (PDL-1 and PDL-2 and wild (ILWL-314 and ILWL-436 accessions showed 10.5-26.5% and 7.5%-15.6% reduction in seed yield per plant, respectively under rain-fed conditions. The reductions in seed yield in the two tolerant cultivars and wilds under severe drought condition were 48-49% and 30.5-45.3% respectively. A set of 258 alleles were identified among 278 genotypes using 35 SSR markers. Genetic diversity and polymorphism information contents varied between 0.321-0.854 and 0.299-0.836, with mean value of 0.682 and 0.643, respectively. All the genotypes were clustered into 11 groups based on SSR markers. Tolerant genotypes were grouped in cluster 6 while sensitive ones were mainly grouped into cluster 7. Wild accessions were separated from cultivars on the basis of both population structure and cluster analysis. Cluster analysis has further grouped the wild accessions on the basis of species and sub-species into 5 clusters. Physiological and morphological characters under drought stress were significantly (P = 0.05 different among microsatellite clusters. These findings suggest that drought adaptation is variable among wild and cultivated genotypes. Also, genotypes from contrasting clusters can be selected for hybridization which could help in evolution of better segregants for improving drought tolerance in lentil.

  5. Molecular Assortment of Lens Species with Different Adaptations to Drought Conditions Using SSR Markers

    Science.gov (United States)

    Singh, Dharmendra; Singh, Chandan Kumar; Tomar, Ram Sewak Singh; Taunk, Jyoti; Singh, Ranjeet; Maurya, Sadhana; Chaturvedi, Ashish Kumar; Pal, Madan; Singh, Rajendra; Dubey, Sarawan Kumar

    2016-01-01

    The success of drought tolerance breeding programs can be enhanced through molecular assortment of germplasm. This study was designed to characterize molecular diversity within and between Lens species with different adaptations to drought stress conditions using SSR markers. Drought stress was applied at seedling stage to study the effects on morpho-physiological traits under controlled condition, where tolerant cultivars and wilds showed 12.8–27.6% and 9.5–23.2% reduction in seed yield per plant respectively. When juxtaposed to field conditions, the tolerant cultivars (PDL-1 and PDL-2) and wild (ILWL-314 and ILWL-436) accessions showed 10.5–26.5% and 7.5%–15.6% reduction in seed yield per plant, respectively under rain-fed conditions. The reductions in seed yield in the two tolerant cultivars and wilds under severe drought condition were 48–49% and 30.5–45.3% respectively. A set of 258 alleles were identified among 278 genotypes using 35 SSR markers. Genetic diversity and polymorphism information contents varied between 0.321–0.854 and 0.299–0.836, with mean value of 0.682 and 0.643, respectively. All the genotypes were clustered into 11 groups based on SSR markers. Tolerant genotypes were grouped in cluster 6 while sensitive ones were mainly grouped into cluster 7. Wild accessions were separated from cultivars on the basis of both population structure and cluster analysis. Cluster analysis has further grouped the wild accessions on the basis of species and sub-species into 5 clusters. Physiological and morphological characters under drought stress were significantly (P = 0.05) different among microsatellite clusters. These findings suggest that drought adaptation is variable among wild and cultivated genotypes. Also, genotypes from contrasting clusters can be selected for hybridization which could help in evolution of better segregants for improving drought tolerance in lentil. PMID:26808306

  6. Different localization patterns of anthocyanin species in the pericarp of black rice revealed by imaging mass spectrometry.

    Directory of Open Access Journals (Sweden)

    Yukihiro Yoshimura

    Full Text Available Black rice (Oryza sativa L. Japonica contains high levels of anthocyanins in the pericarp and is considered an effective health-promoting food. Several studies have identified the molecular species of anthocyanins in black rice, but information about the localization of each anthocyanin species is limited because methodologies for investigating the localization such as determining specific antibodies to anthocyanin, have not yet been developed Matrix-assisted laser desorption/ionization imaging mass spectrometry (MALDI-IMS is a suitable tool for investigating the localization of metabolites. In this study, we identified 7 species of anthocyanin monoglycosides and 2 species of anthocyanin diglycosides in crude extracts from black rice by matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS analysis. We also analyzed black rice sections by MALDI-IMS and found 2 additional species of anthocyanin pentosides and revealed different localization patterns of anthocyanin species composed of different sugar moieties. Anthocyanin species composed of a pentose moiety (cyanidin-3-O-pentoside and petunidin-3-O-pentoside were localized in the entire pericarp, whereas anthocyanin species composed of a hexose moiety (cyanidin-3-O-hexoside and peonidin-3-O-hexoside were focally localized in the dorsal pericarp. These results indicate that anthocyanin species composed of different sugar moieties exhibit different localization patterns in the pericarp of black rice. This is the first detailed investigation into the localization of molecular species of anthocyanins by MALDI-IMS.

  7. DDMGD: the database of text-mined associations between genes methylated in diseases from different species

    KAUST Repository

    Raies, A. B.

    2014-11-14

    Gathering information about associations between methylated genes and diseases is important for diseases diagnosis and treatment decisions. Recent advancements in epigenetics research allow for large-scale discoveries of associations of genes methylated in diseases in different species. Searching manually for such information is not easy, as it is scattered across a large number of electronic publications and repositories. Therefore, we developed DDMGD database (http://www.cbrc.kaust.edu.sa/ddmgd/) to provide a comprehensive repository of information related to genes methylated in diseases that can be found through text mining. DDMGD\\'s scope is not limited to a particular group of genes, diseases or species. Using the text mining system DEMGD we developed earlier and additional post-processing, we extracted associations of genes methylated in different diseases from PubMed Central articles and PubMed abstracts. The accuracy of extracted associations is 82% as estimated on 2500 hand-curated entries. DDMGD provides a user-friendly interface facilitating retrieval of these associations ranked according to confidence scores. Submission of new associations to DDMGD is provided. A comparison analysis of DDMGD with several other databases focused on genes methylated in diseases shows that DDMGD is comprehensive and includes most of the recent information on genes methylated in diseases.

  8. Pathogenic Candida species differ in the ability to grow at limiting potassium concentrations.

    Science.gov (United States)

    Hušeková, B; Elicharová, H; Sychrová, H

    2016-05-01

    A high intracellular concentration of potassium (200-300 mmol/L) is essential for many yeast cell functions, such as the regulation of cell volume and pH, maintenance of membrane potential, and enzyme activation. Thus, cells use high-affinity specific transporters and expend a lot of energy to acquire the necessary amount of potassium from their environment. In Candida genomes, genes encoding 3 types of putative potassium uptake systems were identified: Trk uniporters, Hak symporters, and Acu ATPases. Tests of the tolerance and sensitivity of C. albicans, C. dubliniensis, C. glabrata, C. krusei, C. parapsilosis, and C. tropicalis to various concentrations of potassium showed significant differences among the species, and these differences were partly dependent on external pH. The species most tolerant to potassium-limiting conditions were C. albicans and C. krusei, while C. parapsilosis tolerated the highest KCl concentrations. Also, the morphology of cells changed with the amount of potassium available, with C. krusei and C. tropicalis being the most influenced. Taken together, our results confirm potassium uptake and accumulation as important factors for Candida cell growth and suggest that the sole (and thus probably indispensable) Trk1 potassium uptake system in C. krusei and C. glabrata may serve as a target for the development of new antifungal drugs.

  9. Incidence of Nocardia species in raw milk collected from different localities of Assiut City of Egypt

    Directory of Open Access Journals (Sweden)

    Nahed Mohamad Wahba

    2011-10-01

    Full Text Available This study aimed to isolate and enumerate Nocardiae from the examined raw milk samples. 240 random milk samples were collected from cows, buffaloes, sheep and goats from different localities in Assiut city- Egypt. The incidences of Nocardia spp. were 47.8, 43.3, 53.3 and 66.7% with average counts of 3.8 x104, 4.5x104, 1.4x104 and 7.6x103/CFUmL of the examined samples, respectively. Pathogenicity of the isolates was also studied. N. otitidiscavarium and N. brasiliensis caused sudden death of rats while, N. farcinica and N. carnea strains were non pathogenic. Other species caused several lesions. It was concluded from the study that, Nocardia species are existed in retailed and fresh milk of different farm animals. Most of the isolated strains were highly pathogenic to rats. Consequently, preventive measures should be taken to protect consumers from being infected. [Vet. World 2011; 4(5.000: 201-204

  10. Identification of different oxygen species in oxide nanostructures with 17O solid-state NMR spectroscopy

    Science.gov (United States)

    Wang, Meng; Wu, Xin-Ping; Zheng, Sujuan; Zhao, Li; Li, Lei; Shen, Li; Gao, Yuxian; Xue, Nianhua; Guo, Xuefeng; Huang, Weixin; Gan, Zhehong; Blanc, Frédéric; Yu, Zhiwu; Ke, Xiaokang; Ding, Weiping; Gong, Xue-Qing; Grey, Clare P.; Peng, Luming

    2015-01-01

    Nanostructured oxides find multiple uses in a diverse range of applications including catalysis, energy storage, and environmental management, their higher surface areas, and, in some cases, electronic properties resulting in different physical properties from their bulk counterparts. Developing structure-property relations for these materials requires a determination of surface and subsurface structure. Although microscopy plays a critical role owing to the fact that the volumes sampled by such techniques may not be representative of the whole sample, complementary characterization methods are urgently required. We develop a simple nuclear magnetic resonance (NMR) strategy to detect the first few layers of a nanomaterial, demonstrating the approach with technologically relevant ceria nanoparticles. We show that the 17O resonances arising from the first to third surface layer oxygen ions, hydroxyl sites, and oxygen species near vacancies can be distinguished from the oxygen ions in the bulk, with higher-frequency 17O chemical shifts being observed for the lower coordinated surface sites. H217O can be used to selectively enrich surface sites, allowing only these particular active sites to be monitored in a chemical process. 17O NMR spectra of thermally treated nanosized ceria clearly show how different oxygen species interconvert at elevated temperature. Density functional theory calculations confirm the assignments and reveal a strong dependence of chemical shift on the nature of the surface. These results open up new strategies for characterizing nanostructured oxides and their applications. PMID:26601133

  11. Identification and quantitation of carotenoids and tocopherols in seed oils recovered from different Rosaceae species.

    Science.gov (United States)

    Fromm, Matthias; Bayha, Sandra; Kammerer, Dietmar R; Carle, Reinhold

    2012-10-31

    Seed oils recovered from Rosaceae species such as dessert and cider apples (Malus domestica Borkh.), quince (Cydonia oblonga Mill.), and rose hip (Rosa canina L.) were analyzed for their tocopherol and carotenoid contents using HPLC-DAD-MS(n) following saponification. Qualitative and quantitative tocopherol and carotenoid compositions significantly differed, not only among the different genera but also among cultivars of one species. In particular, seed oils of cider apples were shown to contain higher amounts of both antioxidant classes than that of dessert apples. Total contents of tocopherols of the investigated Rosaceous seed oils ranged from 597.7 to 1099.9 mg/kg oil, while total carotenoid contents varied between 0.48 and 39.15 mg/kg oil. Thus, these seed oils were found to contain appreciable amounts of lipohilic antioxidants having health beneficial potential. The results of the present study contribute to a more economical and exhaustive exploitation of seed byproducts arising from the processing of these Rosaceous fruits.

  12. In vitro biotransformation of pyrrolizidine alkaloids in different species. Part I: Microsomal degradation.

    Science.gov (United States)

    Kolrep, Franziska; Numata, Jorge; Kneuer, Carsten; Preiss-Weigert, Angelika; Lahrssen-Wiederholt, Monika; Schrenk, Dieter; These, Anja

    2018-03-01

    Pyrrolizidine alkaloids (PA) are secondary metabolites of certain flowering plants. The ingestion of PAs may result in acute and chronic effects in man and livestock with hepatotoxicity, mutagenicity, and carcinogenicity being identified as predominant effects. Several hundred PAs sharing the diol pyrrolizidine as a core structure are formed by plants. Although many congeners may cause adverse effects, differences in the toxic potency have been detected in animal tests. It is generally accepted that PAs themselves are biologically and toxicologically inactive and require metabolic activation. Consequently, a strong relationship between activating metabolism and toxicity can be expected. Concerning PA susceptibility, marked differences between species were reported with a comparatively high susceptibility in horses, while goat and sheep seem to be almost resistant. Therefore, we investigated the in vitro degradation rate of four frequently occurring PAs by liver enzymes present in S9 fractions from human, pig, cow, horse, rat, rabbit, goat, and sheep liver. Unexpectedly, almost no metabolic degradation of any PA was observed for susceptible species such as human, pig, horse, or cow. If the formation of toxic metabolites represents a crucial bioactivation step, the found inverse conversion rates of PAs compared to the known susceptibility require further investigation.

  13. Experimental Evaluation of Host Adaptation of Lactobacillus reuteri to Different Vertebrate Species.

    Science.gov (United States)

    Duar, Rebbeca M; Frese, Steven A; Lin, Xiaoxi B; Fernando, Samodha C; Burkey, Thomas E; Tasseva, Guergana; Peterson, Daniel A; Blom, Jochen; Wenzel, Cory Q; Szymanski, Christine M; Walter, Jens

    2017-06-15

    The species Lactobacillus reuteri has diversified into host-specific lineages, implying a long-term association with different vertebrates. Strains from rodent lineages show specific adaptations to mice, but the processes underlying the evolution of L. reuteri in other hosts remain unknown. We administered three standardized inocula composed of strains from different host-confined lineages to mice, pigs, chickens, and humans. The ecological performance of each strain in the gastrointestinal tract of each host was determined by typing random colonies recovered from fecal samples collected over five consecutive days postadministration. Results revealed that rodent strains were predominant in mice, confirming previous findings of host adaptation. In chickens, poultry strains of the lineage VI (poultry VI) and human isolates from the same lineage (human VI) were recovered at the highest and second highest rates, respectively. Interestingly, human VI strains were virtually undetected in human feces. These findings, together with ancestral state reconstructions, indicate poultry VI and human VI strains share an evolutionary history with chickens. Genomic analysis revealed that poultry VI strains possess a large and variable accessory genome, whereas human VI strains display low genetic diversity and possess genes encoding antibiotic resistance and capsular polysaccharide synthesis, which might have allowed temporal colonization of humans. Experiments in pigs and humans did not provide evidence of host adaptation of L. reuteri to these hosts. Overall, our findings demonstrate host adaptation of L. reuteri to rodents and chickens, supporting a joint evolution of this bacterial species with several vertebrate hosts, although questions remain about its natural history in humans and pigs. IMPORTANCE Gut microbes are often hypothesized to have coevolved with their vertebrate hosts. However, the evidence is sparse and the evolutionary mechanisms have not been identified. We

  14. Study of Plant Species Richness in Habitats with Different Grazing Intensities at Golestan National Park and Surrounding Area

    Directory of Open Access Journals (Sweden)

    A. Bagheri

    2016-12-01

    Full Text Available Considering the importance of plant diversity and to evaluate the effect of grazing pressure on species richness and structure of plant communities, this experiment was conducted at Golestan National Park and its surrounding areas in the north east of Iran. Sampling was conducted in intact and abandoned habitats and habitats under seasonal and heavy grazing, using Modified Whitaker Plot in 1, 10,100 and 1000 m2 spatial scales. Results showed that the composition of plant species from different habitats was different. In addition the increasing intensity of grazing increased the importance of therophytes and decreased the role of hemicryptophytes and phanerophytes and also decreasd the amount of species richness. Mean species richness of studied habitat showed a significant difference in all four sampling spatial scales. The results showed that plant species richness decreased in the areas affected by heavy grazing and conservation against grazing plays an important role in maintaining species richness.

  15. Biomass Production of Some Salt Tolerant Tree Species Grown in Different Ecological Zones of Pakistan

    International Nuclear Information System (INIS)

    Mahmood, K.; Chughtai, M. I.; Awan, A. R.; Waheed, R. A.

    2016-01-01

    A study was carried out to evaluate the biomass production potential of salt tolerant tree species grown in saline environments. For this purpose, 5 sites near Badin, Gawadar, Lahore, Faisalabad and Peshawar in different ecological zones of Pakistan were selected. Plantations of 7 tree species common to all sites including Eucalyptus camaldulensis, Phoenix dactylifera, Acacia nilotica, Acacia ampliceps, Prosopis juliflora, Casurinaobesa and Tamarix aphylla were selected for non-destructive biomass measurements. Five trees from each species at each site were assessed for plant height, girth at breast height, canopy area, canopy shape and number of branches. For destructive biomass estimation, six trees of four species (Eucalyptus camaldulensis, Acacia nilotica, Prosopis juliflora and Tamarix aphylla) were harvested at two sites near Lahore and Faisalabad. Biomass of whole tree and its components like stem, branches, twigs, leaves and fruits were determined. Soil and water resources of these sites were also characterized. Results indicated that E. camaldulensis produced maximum average biomass 329 kg in 81/2 years at soil salinity (EC 1:1) 8.5 to 9.4 dS m/sup -1/ and T. aphylla produced 188 kg at soil salinity 12.8 dS m/sup -1/ in 91/2 years. A. nilotica produced biomass 187 kg at 16.9 dS m/sup -1/ in 10 years at Faisalabad; while at Lahore, 369 kg in 18 years under soil salinity level 7.3 dS m/sup -1/. P. juliflora produced minimum biomass 123 kg at soil salinity 7.1 dS m/sup -1/ in 8 years at Lahore and 278 kg at soil salinity 17.2 dS m/sup -1/ in 16 years at Faisalabad. Both soil and water quality was comparatively better at Gawadar and Faisalabad than other sites. Overall, it is concluded that studied tree species are good performer on salt-affected soils and can make saline areas productive. (author)

  16. Characterization of the small RNA component of leaves and fruits from four different cucurbit species

    Directory of Open Access Journals (Sweden)

    Jagadeeswaran Guru

    2012-07-01

    Full Text Available Abstract Background MicroRNAs (miRNAs are a class of non-coding small RNAs involved in post-transcriptional regulation of gene expression critical for plant growth and development, stress responses and other diverse biological processes in plants. The Cucurbitaceae or cucurbit family represents some of economically important species, particularly those with edible and medicinal fruits. Genomic tools for the molecular analysis of members of this family are just emerging. Partial draft genome sequence became available recently for cucumber and watermelon facilitating investigation of the small RNA component of the transcriptomes in cucurbits. Results We generated four small RNA libraries from bottle gourd (Lagenaria siceraria, Cucurbita moschata, Cucurbita pepo, and, watermelon (Citrullus lanatus var. lanatus in order to identify conserved and novel lineage specific miRNAs in these cucurbits. Deep sequencing of small RNA libraries from these species resulted in 1,597,263, 532,948, 601,388, and 493,384 unique sRNA reads from bottle gourd, moschata, pepo and watermelon, respectively. Sequence analysis of these four libraries resulted in identification of 21 miRNA families that are highly conserved and 8 miRNA families that are moderately conserved in diverse dicots. We also identified 4 putative novel miRNAs in these plant species. Furthermore, the tasiRNAs were identified and their biogenesis was determined in these cucurbits. Small RNA blot analysis or q-PCR analyses of leaf and fruit tissues of these cucurbits showed differential expression of several conserved miRNAs. Interestingly, the abundance of several miRNAs in leaves and fruits of closely related C. moschata and C. pepo was also distinctly different. Target genes for the most conserved miRNAs are also predicted. Conclusion High-throughput sequencing of small RNA libraries from four cucurbit species has provided a glimpse of small RNA component in their transcriptomes. The analysis also

  17. The investigation of morphological characteristics of willow species in different environmental conditions

    Directory of Open Access Journals (Sweden)

    Rodzkin Aleh I.

    2016-01-01

    Full Text Available Alternative or renewable energy is a modern strategy with a good per­spective in the nearest future. There are several directions of renewable energy development that depend on climatic, economic and technological opportunities of a region. The perspective choice for areas with moderate climate is bioenergy. One of the bioenergy directions is agro forestry based on short rotation coppice plantations (SRC of trees, like willow, poplar and others. The goal of experiments was the assessment of the potential of different willow species for the obtaining of energy in two climatic zones and on two types of soils of Belarus. For this purpose several morphological characteristics were metered: height of plants, biomass, diameter and number of sprouts. The field experiments were conducted on two types of soils: post-mining peaty soils in Grodno region and on degraded peaty soils in Brest region of Belarus. The same soils are very problematic for growing of traditional agricultural crops, thus willow production is a good alternative for biomass production of energy as well as for the reclamation of these soils. In our experiments the following species of willow were tested (Salix alba, Salix viminalis, Salix dasyclados, Salix aurita that may grow on peaty soils at the natural conditions. The most popular species for modern selection of SRC of willow is Salix viminalis. Nevertheless, the most suitable morphological characteristics on post-mining peaty soils were established for plants of Salix dasyclados and on degraded peaty soils for the plants of Salix alba. The unfavorable parameters at the both type of soils were identified for the plants of Salix aurita. However, it is necessary to take into account that the used species are more popular for natural wetlands and in our experiments plants have best results of survival of cutting and rates of growth at the beginning of vegetation. In accordance with these facts Salix aurita may not be used for energy

  18. THE EFFECTS OF METAL NANOPARTICLES ON EMBRYOS OF DIFFERENT ANIMAL SPECIES. A REVIEW

    Directory of Open Access Journals (Sweden)

    A. TEUŞAN

    2015-09-01

    Full Text Available Today nanotechnology represents a domain that is rapidly developing because nanoparticles are being used in a very large range of products with biomedical applications. Every year, new products, containing nanoparticles (NP appear on the market. Most of the products containing such nanomaterials come to be used by consumers without a previous and careful testing. Therefore, the effects they may have upon human health should be thoroughly investigated, the toxicological potential of NP upon the reproduction function (nanoreprotoxicity in particular, as any possible noxious effect will be reflected in the new generation. Most of the research papers that exist refer on the effects of silver, gold and titanium dioxide NP on embryo development. In this review paper we present the effects of less studied metal NP (platinum, aluminium, cerium oxide, tin oxide, nickel and indium on different species of animal embryos (Gallus domesticus – different hybrids, Danio rerio and Xenopus laevis

  19. An efficient method for genomic DNA extraction from different molluscs species.

    Science.gov (United States)

    Pereira, Jorge C; Chaves, Raquel; Bastos, Estela; Leitão, Alexandra; Guedes-Pinto, Henrique

    2011-01-01

    The selection of a DNA extraction method is a critical step when subsequent analysis depends on the DNA quality and quantity. Unlike mammals, for which several capable DNA extraction methods have been developed, for molluscs the availability of optimized genomic DNA extraction protocols is clearly insufficient. Several aspects such as animal physiology, the type (e.g., adductor muscle or gills) or quantity of tissue, can explain the lack of efficiency (quality and yield) in molluscs genomic DNA extraction procedure. In an attempt to overcome these aspects, this work describes an efficient method for molluscs genomic DNA extraction that was tested in several species from different orders: Veneridae, Ostreidae, Anomiidae, Cardiidae (Bivalvia) and Muricidae (Gastropoda), with different weight sample tissues. The isolated DNA was of high molecular weight with high yield and purity, even with reduced quantities of tissue. Moreover, the genomic DNA isolated, demonstrated to be suitable for several downstream molecular techniques, such as PCR sequencing among others.

  20. Marine debris ingestion by coastal dolphins: what drives differences between sympatric species?

    Science.gov (United States)

    Di Beneditto, Ana Paula Madeira; Ramos, Renata Maria Arruda

    2014-06-15

    This study compared marine debris ingestion of the coastal dolphins Pontoporia blainvillei and Sotalia guianensis in a sympatric area in Atlantic Ocean. Among the 89 stomach contents samples of P. blainvillei, 14 (15.7%) contained marine debris. For S. guianensis, 77 stomach contents samples were analyzed and only one of which (1.30%) contained marine debris. The debris recovered was plastic material: nylon yarns and flexible plastics. Differences in feeding habits between the coastal dolphins were found to drive their differences regarding marine debris ingestion. The feeding activity of P. blainvillei is mainly near the sea bottom, which increases its chances of ingesting debris deposited on the seabed. In contrast, S. guianensis has a near-surface feeding habit. In the study area, the seabed is the main zone of accumulation of debris, and species with some degree of association with the sea bottom may be local bioindicators of marine debris pollution. Copyright © 2014 Elsevier Ltd. All rights reserved.

  1. Hippocampal mossy fibers and swimming navigation learning in two vole species occupying different habitats.

    Science.gov (United States)

    Pleskacheva, M G; Wolfer, D P; Kupriyanova, I F; Nikolenko, D L; Scheffrahn, H; Dell'Omo, G; Lipp, H P

    2000-01-01

    We showed previously for mice that size differences of the infrapyramidal hippocampal mossy fiber projection (IIP-MF) correlate with spatial learning abilities. In order to clarify the role of the IIP-MF in a natural environment, we studied the bank vole (Clethrionomys glareolus), adapted to a wide range of different habitats, and the root vole (Microtus oeconomus), living in homogenous grassland habitats with small home ranges. Morphometry on Timm-stained horizontal brain sections of six C. glareolus and six M. oeconomus revealed that the size of the entire mossy fiber projection was 42% larger in C. glareolus than M. oeconomus. C. glareolus had also an IIP-MF projection about 230% larger than that of the root vole. A sample of captured animals was then transferred to the laboratory (C. glareolus, n = 23; M. oeconomus, n = 15) and underwent testing for swimming navigation according to a standardized protocol used to assess water maze learning in about 2,000 normal and transgenic mice. Both species learned faster than laboratory mice. Overall escape times showed no differences, but path length was significantly reduced in C. glareolus, which also showed superior performance in a variety of scores assessing spatial search patterns. On the other hand, M. oeconomus showed faster swimming speed, and strong thigmotaxis combined with circular swimming. M. oeconomus also scored at chance levels during the probe trial, about as poorly as mutant knockout mice considered to be deficient in spatial memory. These differences probably reflect differential styles of water maze learning rather than spatial memory deficits: C. glareolus appears to be superior in inhibiting behavior interfering with proper spatial search behavior, while M. oeconomus succeeds in escaping by using rapid circular swimming. We assume that size variations of the IIP-MF correspond to a mechanism stabilizing hippocampal processing during spatial learning or complex activities. This corresponds to the

  2. Effects of Different Plant Species and Different Sowing Dates on Forage Yield, Grazing Capacity and Estimated Carcass Weight in the Continental Climate Zones

    OpenAIRE

    ÇAKMAKÇI, Sadık; AYDINOĞLU, Bilal; ARSLAN, Mehmet

    2014-01-01

    This research was conducted to study the effects of artificial sowing with various plant species and different sowing dates on forage yield, grazing capacity and estimated carcass weight in rangelands under continental dry conditions. Artificial rangelands were established on Akpınar plateau near Kemer-Burdur 1675 m above sea level using 4 different plant species sown at 5 different sowing dates. Later, grazing capacity and carcass weight were estimated in terms of forage yield. The results s...

  3. Phytotoxic Activity of Ocimum tenuiflorum Extracts on Germination and Seedling Growth of Different Plant Species

    Directory of Open Access Journals (Sweden)

    A. K. M. Mominul Islam

    2014-01-01

    Full Text Available Phytotoxic activity of Ocimum tenuiflorum (Lamiaceae plant extracts was investigated against the germination and seedling growth of cress (Lepidium sativum, lettuce (Lactuca sativa, alfalfa (Medicago sativa, Italian ryegrass (Lolium multiflorum, barnyard grass (Echinochloa crus-galli, and timothy (Phleum pratense at four different concentrations. The plant extracts at concentrations greater than 30 mg dry weight equivalent extract mL−1 reduced significantly the total germination percent (GP, germination index (GI, germination energy (GE, speed of emergence (SE, seedling vigour index (SVI, and coefficient of the rate of germination (CRG of all test species except barnyard grass and GP of lettuce. In contrast, time required for 50% germination (T50 and mean germination time (MGT were increased at the same or higher than this concentration. The increasing trend of T50 and MGT and the decreasing trend of other indices indicated a significant inhibition or delay of germination of the test species by O. tenuiflorum plant extracts and vice versa. In addition, the shoot and root growth of all test species were significantly inhibited by the extracts at concentrations greater than 10 mg dry weight equivalent extract mL−1. The I50 values for shoot and root growth were ranged from 26 to 104 mg dry weight equivalent extract mL−1. Seedling growth was more sensitive to the extracts compared to seed germination. Results of this study suggest that O. tenuiflorum plant extracts have phytotoxic properties and thus contain phytotoxic substances. Isolation and characterization of those substances from this plant may act as a tool for new natural, biodegradable herbicide development to control weeds.

  4. Ammonia concentration at emergence and its effects on the recovery of different species of entomopathogenic nematodes.

    Science.gov (United States)

    San-Blas, Ernesto; Pirela, Deynireth; García, Dana; Portillo, Edgar

    2014-09-01

    The life cycle of entomopathogenic nematodes (EPN) occurs inside an insect cadaver and an accumulation of ammonia initiates as a consequence of the nematodes defecation. This accumulation reduces the food resources quality and creates a detrimental environment for nematodes. When a given ammonia concentration is reached, the nematodes start their emergence process, searching for a new host. In the present work, this parameter, ammonia triggering point (ATP) was measured in 7 Steinernema species/strains. The effect of different ammonia concentrations on the recovery process and their consequences in the nematodes survival were also investigated. The results indicate that ATP varies among nematode species; Steinernema glaseri showed the highest ATP of the evaluated species (1.98±2.6 mg of NH4-N*g of Galleria mellonella(-1)); whereas Steinernema riobrave presented the lowest ATP (1.16±0.1 mg of NH4-N*g of G. mellonella(-1)). On the other hand, the nematode emergence could be a repulsive response when ATP is reached. As the ammonia concentration increased the recovery percentage of Steinernema feltiae (Chile strain) dropped gradually from 79.4±11.9% in the control treatment to 0% when 1mg of NH4-N*ml of bacterial broth(-1) was added. It is possible, that emergence process could be a repulsive response of the nematodes due to ammonia concentration when is reaching the ATP. The role of ammonia inside the insect cadavers, might suggests connections with some stages of the EPN life cycle. Copyright © 2014 Elsevier Inc. All rights reserved.

  5. The islands are different: human perceptions of game species in Hawaii.

    Science.gov (United States)

    Lohr, Cheryl A; Lepczyk, Christopher A; Johnson, Edwin D

    2014-10-01

    Hawaii's game animals are all non-native species, which provokes human-wildlife conflict among stakeholders. The management of human-wildlife conflict in Hawaii is further complicated by the discrete nature of island communities. Our goal was to understand the desires and perceived values or impacts of game held by residents of Hawaii regarding six game species [pigs (Sus scrofa), goats (Capra hircus), mouflon (Ovis musimon), axis deer (Axis axis), turkeys (Melagris gallopavo), and doves (Geopelia striata)]. We measured the desired abundance of game on the six main Hawaiian Islands using the potential for conflict index and identified explanatory variables for those desires via recursive partitioning. In 2011 we surveyed 5,407 residents (2,360 random residents and 3,047 pre-identified stakeholders). Overall 54.5 and 27.6 % of the emailed and mailed surveys were returned (n = 1,510). A non-respondent survey revealed that respondents and non-respondents had similar interest in wildlife, and a similar education level. The desired abundance of game differed significantly among stakeholders, species, and islands. The desired abundance scores were higher for axis deer, mouflon, and turkeys compared to pigs, goats or doves. Enjoyment at seeing game and the cultural value of game were widespread explanatory variables for desired abundance. Models for Lanai emphasized the economic value of game, whereas models for Maui identified the potential for game to contaminate soil and water. Models for Oahu and Kauai revealed concern for human health and safety. Given our findings we recommend managers design separate management plans for each island taking into consideration the values of residents.

  6. Shade tolerance and herbivory are associated with RGR of tree species via different functional traits.

    Science.gov (United States)

    Salgado-Luarte, C; Gianoli, E

    2017-05-01

    Relative growth rate (RGR) plays an important role in plant adaptation to the light environment through the growth potential/survival trade-off. RGR is a complex trait with physiological and biomass allocation components. It has been argued that herbivory may influence the evolution of plant strategies to cope with the light environment, but little is known about the relation between susceptibility to herbivores and growth-related functional traits. Here, we examined in 11 evergreen tree species from a temperate rainforest the association between growth-related functional traits and (i) species' shade-tolerance, and (ii) herbivory rate in the field. We aimed at elucidating the differential linkage of shade and herbivory with RGR via growth-related functional traits. We found that RGR was associated negatively with shade-tolerance and positively with herbivory rate. However, herbivory rate and shade-tolerance were not significantly related. RGR was determined mainly by photosynthetic rate (A max ) and specific leaf area (SLA). Results suggest that shade tolerance and herbivore resistance do not covary with the same functional traits. Whereas shade-tolerance was strongly related to A max and to a lesser extent to leaf mass ratio (LMR) and dark respiration (R d ), herbivory rate was closely related to allocation traits (SLA and LMR) and slightly associated with protein content. The effects of low light on RGR would be mediated by A max , while the effects of herbivory on RGR would be mediated by SLA. Our findings suggest that shade and herbivores may differentially contribute to shape RGR of tree species through their effects on different resource-uptake functional traits. © 2016 German Botanical Society and The Royal Botanical Society of the Netherlands.

  7. Species difference between rat and hamster in tissue accumulation of mercury after administration of methylmercury

    International Nuclear Information System (INIS)

    Omata, Saburo; Kasama, Hidetaka; Hasegawa, Hiroshi; Hasegawa, Kazuhiro; Sugano, Hiroshi; Ozaki, Kunio

    1986-01-01

    The accumulation of mercury in tissues of the rat and hamster was determined after the administration of a single dose of 203 Hg-methylmercury chloride (10 mg/kg body weight). (1) On day 2, the mercury contents of hamster tissues were higher than those of rat tissues, except for red blood cells, in which the mercury content was about 6-fold higher in the rat than in the hamster. (2) After that time, the mercury content of hamster tissues decreased rather steeply and on day 16 it had reached 14-25% in nervous tissues and 7-15% in other tissues, of the levels on day 2. (3) In the rat, on the other hand, the mercury content of nervous tissues on day 16 was higher than that on day 2 (106-220%), except for dorsal roots and dorsal root ganglia, which showed slight decreases (75-94% of the levels on day 2). In non-neural tissues, the decreases up to day 16 were also small (71-92% of the levels on day 2). (4) Thus, both the uptake and elimination of mercury seem to be more rapid in the tissues of hamster compared with those of the rat. Similar trends of mercury accumulation and elimination were observed when animals received multiple injections of methylmercury that induced acute methylmercury intoxication. (5) Significant biotransmormation of the injected methylmercury to inorganic mercury was detected in the liver, kidney and spleen of both animal species. Although the percentages of inorganic mercury in these tissues wer not so different between the two species on day 2, they became exceedingly high in the tissues of hamster at the later stage, except in the kidney cytosol, in which the values were close in both animal species between day 2 and day 16. (orig.)

  8. Differences in Diet between Two Rodent Species, Mastomys natalensis and Gerbilliscus vicinus, in Fallow Land Habitats in Central Tanzania

    DEFF Research Database (Denmark)

    Mulungu, Loth S.; Massawe, Apia W.; Kennis, Jan

    2011-01-01

    Differences in the ecological niche requirements among rodent species competing in the same habitat may result from differences in the use of one to three resources: space, time and food or some combination of these. Alternatively, differences in resource use utilization among animal species may...... simply reflect availability of food, and when food is limited, different animal species compete. In this study, the diet of two rodent pest species, Mastomys natalensis and Gerbilliscus vicinus, coexisting in fallow land in central Tanzania were studied to assess the degree of diet differentiation among...... them. Dietary niche breadth of G. vicinus was greater than that of M. natalensis in all stages of the maize cropping seasons. The rodent species studied overlapped considerably in the food items consumed ranging from niche overlap (Ojk) of 0.77–0.89. Grains/seeds featured high in the diet of M...

  9. Measurement of P-Glycoprotein expression in human neuroblastoma xenografts using in vitro quantitative autoradiography

    Energy Technology Data Exchange (ETDEWEB)

    Fonti, Rosa; Levchenko, Andrey; Mehta, Bipin M.; Zhang Jiaju; Tsuruo, Takashi; Larson, Steven M

    1999-01-01

    P-glycoprotein (P-gp) has a role in multidrug resistance (MDR) encountered in human cancers. In this study, we used the colchicine-resistant cell line BE(2)-C/CHCb(0.2), a strain of neuroblastoma cell line BE(2)-C, as a model to measure variations of P-gp expression in cells grown in vitro and in vivo. Cells were cultured in the medium supplemented with colchicine. At the beginning of the study the drug was withdrawn and, after 22 days, added back to the culture medium. Cells were harvested at various time points and xenografted in nude mice. P-gp content in cells was measured by self-competitive binding assay and in tumors, by quantitative autoradiography (QAR). Both assays were carried out using {sup 125}I-labeled monoclonal antibody MRK16, reactive with P-gp. Concentration of P-gp in cells varied from a maximum of 1,361 pmol/g in the presence of colchicine to a minimum of 374 pmol/g in the absence of colchicine in the culture medium. P-gp concentration in the tumors ranged from 929 to 188 pmol/g, which correlated with P-gp content in the cells at the time of their injection in the mice. QAR is an accurate and reliable method to quantify P-gp expression in tumors. Changes in colchicine concentration in the ambient medium of BE(2)-C/CHCb(0.2) cells growing in vitro resulted in a change in phenotype of P-gp expression, which was stable under conditions of in vivo growth over approximately 9 cell divisions in nude mice xenografts. Therefore, P-gp content in xenografts depends only on the level of resistance of the cells at the time of their injection in the mice.

  10. In situ hybridization at the electron microscope level: hybrid detection by autoradiography and colloidal gold.

    Science.gov (United States)

    Hutchison, N J; Langer-Safer, P R; Ward, D C; Hamkalo, B A

    1982-11-01

    In situ hybridization has become a standard method for localizing DNA or RNA sequences in cytological preparations. We developed two methods to extend this technique to the transmission electron microscope level using mouse satellite DNA hybridization to whole mount metaphase chromosomes as the test system. The first method devised is a direct extension of standard light microscope level using mouse satellite DNA hybridization to whole mount metaphase chromosomes as the test system. The first method devised is a direct extension of standard light microscope in situ hybridization. Radioactively labeled complementary RNA (cRNA) is hybridized to metaphase chromosomes deposited on electron microscope grids and fixed in 70 percent ethanol vapor; hybridixation site are detected by autoradiography. Specific and intense labeling of chromosomal centromeric regions is observed even after relatively short exposure times. Inerphase nuclei present in some of the metaphase chromosome preparations also show defined paatterms of satellite DNA labeling which suggests that satellite-containing regions are associate with each other during interphase. The sensitivity of this method is estimated to at least as good as that at the light microscope level while the resolution is improved at least threefold. The second method, which circumvents the use of autoradiogrphic detection, uses biotin-labeled polynucleotide probes. After hybridization of these probes, either DNA or RNA, to fixed chromosomes on grids, hybrids are detected via reaction is improved at least threefold. The second method, which circumvents the use of autoradiographic detection, uses biotin-labeled polynucleotide probes. After hybridization of these probes, either DNA or RNA, to fixed chromosomes on grids, hybrids are detected via reaction with an antibody against biotin and secondary antibody adsorbed to the surface of over centromeric heterochromatin and along the associated peripheral fibers. Labeling is on average

  11. Characterization of a polymorphic family of integral membrane proteins in promastigotes of different Leishmania species.

    Science.gov (United States)

    Symons, F M; Murray, P J; Ji, H; Simpson, R J; Osborn, A H; Cappai, R; Handman, E

    1994-09-01

    Antibodies raised against a Leishmania major recombinant promastigote surface antigen 2 (PSA-2) fragment recognized three major polypeptides of approximate M(r) 96,000, 80,000 and 50,000 in promastigotes of three Israeli isolates of L. major including the cloned line LRC-L137-V121, but detected a different array of polypeptides in other L. major isolates. The pattern was different both in number of polypeptides detected and their molecular weight. The antibodies to L. major PSA-2 also recognized polypeptides in L. tropica, L. donovani and very weakly in L. mexicana promastigotes and in Crithidia lucilliae. The number and size of the polypeptides was different in each species. In addition to the membrane-bound PSA-2 polypeptides we identified water-soluble forms of PSA-2 released in promastigote culture supernatants. Peptide maps of the various L. major PSA-2 membrane polypeptides showed they were different from each other. N-terminal amino acid sequence of the three polypeptides expressed by L. major showed they are similar but distinct, consistent with being members of a polymorphic family. Because of the extensive sequence similarity between the PSA-2 genes it has been difficult to assign protein products to individual genes. As a first step towards solving this problem, we have transfected into L. mexicana a genomic clone of a L. major PSA-2 gene and shown that it produces a M(r) 35,000 polypeptide recognized by monoclonal and polyclonal antibodies to L. major PSA-2.

  12. Species Diversity and Botanical Composition of Permanent Grassland as a Response to Different Grazing Management Practices

    Directory of Open Access Journals (Sweden)

    Marie Štýbnarová

    2015-01-01

    Full Text Available The effects of different levels of grazing utilization (two, three and four grazing cycles per year and mineral fertilization (nil-fertilization; N100P30K60 on the botanical composition of permanent grasslands were studied in the locality of Rapotín (Czech Republic, 332 m a.s.l. from 2003–2010. The vegetation of the experimental pasture was classified as Cynosurion. It was found that moderate treatment (three grazing cycles per year without mineral fertilization showed the highest value of diversity index (DI = 6.08, and maximum dominance of legumes (Dmax = 9.1%, particularly Trifolium repens. The highest dominance of grasses (Dmax = 77.7%, mainly Dactylis glomerata and Elytrigia repens, was achieved with the fertilized treatment utilized in two grazing cycles per year. Based on RDA results, tested management treatments explained 26% of species composition variability, where effect of number of grazing cycles per year was five-times higher than effect of fertilization. We recommend grassland utilization in three grazing cycles per year as the most suitable way from the objective of both species diversity and botanical composition of pastures in similar site conditions. Pasture fertilization should be more controlled by careful consideration of individual pasture goals, actual nutrient status of the soil and possible environmental risks.

  13. Evaluation of the Biocidal Efficacy of Different Forms of Silver Against Cupriavidus (formerly Wautersia) Species Bacteria

    Science.gov (United States)

    Gazda, Daniel B.; Schultz, John R.; Wong, Wing; Algate, Michelle T.; Bryant, Becky; Castro, Victoria A.

    2009-01-01

    Contingency Water Containers (CWCs) are used to store potable and technical water that is transferred to the International Space Station (ISS) from the Shuttle orbiter vehicles. When CWCs are filled, water from the orbiter galley is passed through an ion exchange/activated carbon cartridge that removes the residual iodine biocide used on Shuttle before silver biocide is added. Removal of iodine and addition of silver is necessary to inhibit microbial growth inside CWCs and maintain compatibility with the water systems in the Russian segment of ISS. As part of nominal water transfer activities, crewmembers collect samples from several CWCs for postflight analysis. Results from the analysis of water transfer samples collected during the docked phases of STS-118/13A.1 and STS-120/10A showed that several of the CWCs contained up to 10(exp 4) CFU/mL of bacteria despite the fact that the silver concentrations in the CWCs were within acceptable limits. The samples contained pure cultures of a single bacteria, a Cupriavidus (formerly Wautersia) species that has been shown to be resistant to metallic biocides. As part of the investigation into the cause and remediation of the bacterial contamination in these CWCs, ground studies were initiated to evaluate the resistance of the Cupriavidus species to the silver biocides used on ISS and to determine the minimum effective concentration for the different forms of silver present in the biocides. The initial findings from those experiments are discussed herein.

  14. Genospecies and virulence factors of Aeromonas species in different sources in a North African country

    Directory of Open Access Journals (Sweden)

    Khalifa Sifaw Ghenghesh

    2014-09-01

    Full Text Available Introduction: Aeromonads of medical importance have been reported from numerous clinical, food, and water sources, but identification of genospecies and virulence factors of Aeromonas species from countries in North Africa and the Middle East are few. Methods: In total 99 Aeromonas species isolates from different sources (diarrheal children [n=23], non-diarrheal children [n=16], untreated drinking water from wells [n=32], and chicken carcasses [n=28] in Tripoli, Libya, were included in the present investigation. Genus identification was confirmed by biochemical analysis, and genospecies were determined using a combination of 16S rDNA variable region and gyrB sequence analysis. Polymerase chain reaction (PCR was used to detect genes encoding toxins from 52 of the isolates. Results: We identified 44 isolates (44% as A. hydrophila (3 [3.0%] subspecies anaerogenes, 23 [23%] subspecies dhakensis, and 18 [18%] subspecies ranae; 27 isolates (27% as A. veronii; 23 isolates (23% as A. caviae; and 5 isolates (5.0% as other genospecies. The genes encoding aerolysin (aer, cytolytic enterotoxin (act, and A. hydrophila isolate SSU enterotoxin (ast were detected in 45 (87%, 4 (7.7%, and 9 (17% of the 52 isolates tested, respectively. The gene encoding an extracellular lipase (alt was not detected. Conclusion: The majority of aeromonads from Libya fall within three genospecies (i.e. A. hydrophila, A. veronii, and A. caviae, and genes coding for toxin production are common among them.

  15. Extractor capacity of different plant species cultivated in wetlands used to pig wastewater treatment

    Directory of Open Access Journals (Sweden)

    Antonio Teixeira de Matos

    2009-08-01

    Full Text Available The objective of this study was to evaluate the extracting capacity of different plant species when cultivated in constructed wetlands systems (CWS for the treatment of pig wastewaters (PW. For this, four CWS were constructed with 24.0 m x 1.1 m x 0.7 m, sealed with geomembrana of polyvinyl chloride (PVC and filled with 0.4 m of gravel “zero”. In CWS1, CWS2 and CWS3 were planted cattail (Typha latifolia L., Alternanthera philoxeroides (Mart. Griseb. and grass-Tifton 85 (Cynodon dactylon Pers., respectively. In CWS4 was planted Alternanthera on the 1st third, Typha in 2nd third and tifton-85 in the 3rd third of the bed. After passing through a organic filter filled with crushed sugar cane bagasse, the ARS was applied in SACS in a flow of 0.8 m3 d-1, which provided a detention time of 4.8 days. There was a trend to obtain higher extraction of pollutants by plants grown at the beginning of the CWS. The Alternanthera plant species that was presented greater capacity for nutrient extractor, extracting 9.5 and 23% of all total-N and K applied through ARS. Plants extracted small amounts of copper from the ARS. Because of the improved performance of plants, Alternanthera or Tifton-85 grass must be cultivated in CWS for the ARS treatment.

  16. Differences in Prokaryotic Species Between Primary and Logged-Over Deep Peat Forest in Sarawak, Malaysia

    International Nuclear Information System (INIS)

    Mohd Shawal Thakib Maidin; Sakinah Safari; Nur Aziemah Ghani; Sharifah Azura Syed Ibrahim; Shamsilawani Ahamed Bakeri; Mohamed Mazmira Mohd Masri; Siti Ramlah Ahmad Ali

    2016-01-01

    Peat land has an important role in environmental sustainability which can be used for agricultural purposes. However, deforestation in the logged-over forest may disrupt the diversity of microbial population in peat soil. Therefore, this study focuses on the differences of microbial populations in Maludam primary forest and Cermat Ceria logged-over forest in Sarawak, Malaysia. The prokaryotic 16S rDNA region was amplified followed by denaturing gradient gel electrophoresis (16S PCR-DGGE) analysis. Berger-Parker and Shannon-Weaver Biodiversity Index showed that Maludam (0.11, 7.75) was more diverse compared to Cermat Ceria (0.19, 7.63). Sequence analysis showed that the bacterial community in Maludam and Cermat Ceria were dominated by unclassified bacteria, followed by Acidobacteria, Actinobacteria, Firmicutes and a-Proteobacteria. Based on the findings, the distinct species that can be found in Maludam were Acidobacterium capsulatum, Solibacter sp., Mycobacterium intracellulare, Rhodoplanes sp., Clostridia bacterium, Exiguobacterium sp. and Lysinibacillus fusiformis. While, the distinct species that can be found in Cermat Ceria were Telmatobacter, Mycobacterium tuberculosis and Bacillus tequilensis. Overall, the findings showed that microbial population in the logged-over forest are less diverse compared to primary forest. Higher prokaryotic diversity identified in the primary forest compared to logged-over forest showed that deforestation might cause prokaryotic population changes to both ecosystems. (author)

  17. Species-dependence of cyanobacteria removal efficiency by different drinking water treatment processes.

    Science.gov (United States)

    Zamyadi, Arash; Dorner, Sarah; Sauvé, Sébastien; Ellis, Donald; Bolduc, Anouka; Bastien, Christian; Prévost, Michèle

    2013-05-15

    Accumulation and breakthrough of several potentially toxic cyanobacterial species within drinking water treatment plants (DWTP) have been reported recently. The objectives of this project were to test the efficiency of different treatment barriers in cyanobacterial removal. Upon observation of cyanobacterial blooms, intensive sampling was conducted inside a full scale DWTP at raw water, clarification, filtration and oxidation processes. Samples were taken for microscopic speciation/enumeration and microcystins analysis. Total cyanobacteria cell numbers exceeded World Health Organisation and local alert levels in raw water (6,90,000 cells/mL). Extensive accumulation of cyanobacteria species in sludge beds and filters, and interruption of treatment were observed. Aphanizomenon cells were poorly coagulated and they were not trapped efficiently in the sludge. It was also demonstrated that Aphanizomenon cells passed through and were not retained over the filter. However, Microcystis, Anabaena, and Pseudanabaena cells were adequately removed by clarification and filtration processes. The breakthrough of non toxic cyanobacterial cells into DWTPs could also result in severe treatment disruption leading to plant shutdown. Application of intervention threshold values restricted to raw water does not take into consideration the major long term accumulation of potentially toxic cells in the sludge and the risk of toxins release. Thus, a sampling regime inside the plant adapted to cyanobacterial occurrence and intensity is recommended. Copyright © 2013 Elsevier Ltd. All rights reserved.

  18. Different Non-Saccharomyces Yeast Species Stimulate Nutrient Consumption in S. cerevisiae Mixed Cultures.

    Science.gov (United States)

    Curiel, Jose A; Morales, Pilar; Gonzalez, Ramon; Tronchoni, Jordi

    2017-01-01

    The growing interest of the winemaking industry on the use of non- Saccharomyces starters has prompted several studies about the physiological features of this diverse group of microorganisms. The fact that the proposed use of these new starters will almost invariably involve either simultaneous or sequential inoculation with Saccharomyces cerevisiae has also driven the attention to the potential biological interactions between different starters during wine fermentation. Our current understanding is that alternative yeast starters will affect wine features by both direct and indirect mechanisms (through metabolic or other types of interactions with S. cerevisiae ). There are still few studies addressing the question of yeast-yeast interactions in winemaking by a transcriptomic approach. In a previous report, we revealed early responses of S. cerevisiae and Torulaspora delbrueckii to the presence of each other under anaerobic conditions, mainly the overexpression of genes related with sugar consumption and cell proliferation. We have now studied the response, under aerobic conditions, of S. cerevisiae to other two non- Saccharomyces species, Hanseniaspora uvarum and Candida sake , keeping T. delbrueckii as a reference; and always focusing on the early stages of the interaction. Results point to some common features of the way S. cerevisiae modifies its transcriptome in front of other yeast species, namely activation of glucose and nitrogen metabolism, being the later specific for aerobic conditions.

  19. Different Non-Saccharomyces Yeast Species Stimulate Nutrient Consumption in S. cerevisiae Mixed Cultures

    Directory of Open Access Journals (Sweden)

    Jose A. Curiel

    2017-10-01

    Full Text Available The growing interest of the winemaking industry on the use of non-Saccharomyces starters has prompted several studies about the physiological features of this diverse group of microorganisms. The fact that the proposed use of these new starters will almost invariably involve either simultaneous or sequential inoculation with Saccharomyces cerevisiae has also driven the attention to the potential biological interactions between different starters during wine fermentation. Our current understanding is that alternative yeast starters will affect wine features by both direct and indirect mechanisms (through metabolic or other types of interactions with S. cerevisiae. There are still few studies addressing the question of yeast–yeast interactions in winemaking by a transcriptomic approach. In a previous report, we revealed early responses of S. cerevisiae and Torulaspora delbrueckii to the presence of each other under anaerobic conditions, mainly the overexpression of genes related with sugar consumption and cell proliferation. We have now studied the response, under aerobic conditions, of S. cerevisiae to other two non-Saccharomyces species, Hanseniaspora uvarum and Candida sake, keeping T. delbrueckii as a reference; and always focusing on the early stages of the interaction. Results point to some common features of the way S. cerevisiae modifies its transcriptome in front of other yeast species, namely activation of glucose and nitrogen metabolism, being the later specific for aerobic conditions.

  20. Molecular epidemiology of Avian Rotaviruses Group A and D shed by different bird species in Nigeria.

    Science.gov (United States)

    Pauly, Maude; Oni, Oluwole O; Sausy, Aurélie; Owoade, Ademola A; Adeyefa, Christopher A O; Muller, Claude P; Hübschen, Judith M; Snoeck, Chantal J

    2017-06-12

    Avian rotaviruses (RVs) cause gastrointestinal diseases of birds worldwide. However, prevalence, diversity, epidemiology and phylogeny of RVs remain largely under-investigated in Africa. Fecal samples from 349 birds (158 symptomatic, 107 asymptomatic and 84 birds without recorded health status) were screened by reverse transcription PCR to detect RV groups A and D (RVA and RVD). Partial gene sequences of VP4, VP6, VP7 and NSP4 for RVA, and of VP6 and VP7 for RVD were obtained and analyzed to infer phylogenetic relationship. Fisher's exact test and logistic regression were applied to identify factors potentially influencing virus shedding in chickens. A high prevalence of RVA (36.1%; 126/349) and RVD (31.8%; 111/349) shedding was revealed in birds. In chickens, RV shedding was age-dependent and highest RVD shedding rates were found in commercial farms. No negative health effect could be shown, and RVA and RVD shedding was significantly more likely in asymptomatic chickens: RVA/RVD were detected in 51.9/48.1% of the asymptomatic chickens, compared to 18.9/29.7% of the symptomatic chickens (p epidemiology, diversity and classification of avian RVA and RVD in Nigeria. We show that cross-species transmission of host permissive RV strains occurs when different bird species are mixed.

  1. Long-term fertilization determines different metabolomic profiles and responses in saplings of three rainforest tree species with different adult canopy position.

    Directory of Open Access Journals (Sweden)

    Albert Gargallo-Garriga

    Full Text Available Tropical rainforests are frequently limited by soil nutrient availability. However, the response of the metabolic phenotypic plasticity of trees to an increase of soil nutrient availabilities is poorly understood. We expected that increases in the ability of a nutrient that limits some plant processes should be detected by corresponding changes in plant metabolome profile related to such processes.We studied the foliar metabolome of saplings of three abundant tree species in a 15 year field NPK fertilization experiment in a Panamanian rainforest. The largest differences were among species and explained 75% of overall metabolome variation. The saplings of the large canopy species, Tetragastris panamensis, had the lowest concentrations of all identified amino acids and the highest concentrations of most identified secondary compounds. The saplings of the "mid canopy" species, Alseis blackiana, had the highest concentrations of amino acids coming from the biosynthesis pathways of glycerate-3P, oxaloacetate and α-ketoglutarate, and the saplings of the low canopy species, Heisteria concinna, had the highest concentrations of amino acids coming from the pyruvate synthesis pathways.The changes in metabolome provided strong evidence that different nutrients limit different species in different ways. With increasing P availability, the two canopy species shifted their metabolome towards larger investment in protection mechanisms, whereas with increasing N availability, the sub-canopy species increased its primary metabolism. The results highlighted the proportional distinct use of different nutrients by different species and the resulting different metabolome profiles in this high diversity community are consistent with the ecological niche theory.

  2. Experimental mixture design as a tool to optimize the growth of various Ganoderma species cultivated on media with different sugars

    OpenAIRE

    Yit Kheng Goh; Nurul Fadhilah Marzuki; Suet Yee Tan; Swee Sian Tan; Hun Jiat Tung; You Keng Goh; Kah Joo Goh

    2016-01-01

    The influence of different medium components (glucose, sucrose, and fructose) on the growth of different Ganoderma isolates and species was investigated using mixture design. Ten sugar combinations based on three simple sugars were generated with two different concentrations, namely 3.3% and 16.7%, which represented low and high sugar levels, respectively. The media were adjusted to either pH 5 or 8. Ganoderma isolates (two G. boninense from oil palm, one Ganoderma species from coconut palm, ...

  3. Growth response of four freshwater algal species to dissolved organic nitrogen of different concentration and complexity

    DEFF Research Database (Denmark)

    Fiedler, Dorothea; Graeber, Daniel; Badrian, Maria

    2015-01-01

    1. Dissolved organic nitrogen (DON) compounds dominate the nitrogen pool of many lakes, but their importance as nitrogen sources for freshwater phytoplankton is not fully understood. Previous growth experiments demonstrated the availability of urea and amino acids but often at unnaturally high...... cases matched by nitrate. 4. Urea was also utilised over a longer time period than any other compound, including nitrate. The assumed delay in availability with increasing compound complexity was not supported by this experiment. 5. The studied species differed in their temporal response...... and their compound preferences. Therefore, DON composition can influence biomass and structure of phytoplankton communities. 6. These experiments demonstrate the importance of the main DON compounds for phytoplankton growth when no inorganic nitrogen is available. DON should in future be included in nitrogen budget...

  4. Sites of reactive oxygen species generation by mitochondria oxidizing different substrates

    Directory of Open Access Journals (Sweden)

    Casey L. Quinlan

    2013-01-01

    Full Text Available Mitochondrial radical production is important in redox signaling, aging and disease, but the relative contributions of different production sites are poorly understood. We analyzed the rates of superoxide/H2O2 production from different defined sites in rat skeletal muscle mitochondria oxidizing a variety of conventional substrates in the absence of added inhibitors: succinate; glycerol 3-phosphate; palmitoylcarnitine plus carnitine; or glutamate plus malate. In all cases, the sum of the estimated rates accounted fully for the measured overall rates. There were two striking results. First, the overall rates differed by an order of magnitude between substrates. Second, the relative contribution of each site was very different with different substrates. During succinate oxidation, most of the superoxide production was from the site of quinone reduction in complex I (site IQ, with small contributions from the flavin site in complex I (site IF and the quinol oxidation site in complex III (site IIIQo. However, with glutamate plus malate as substrate, site IQ made little or no contribution, and production was shared between site IF, site IIIQo and 2-oxoglutarate dehydrogenase. With palmitoylcarnitine as substrate, the flavin site in complex II (site IIF was a major contributor (together with sites IF and IIIQo, and with glycerol 3-phosphate as substrate, five different sites all contributed, including glycerol 3-phosphate dehydrogenase. Thus, the relative and absolute contributions of specific sites to the production of reactive oxygen species in isolated mitochondria depend very strongly on the substrates being oxidized, and the same is likely true in cells and in vivo.

  5. Species presence frequency and diversity in different patch types along an altitudinal gradient: Larix chinensis Beissn in Qinling Mountains (China

    Directory of Open Access Journals (Sweden)

    Minyi Huang

    2016-03-01

    Full Text Available Forest communities are mosaic systems composed of patches classified into four different developmental patch types: gap patch (G, building patch (B, mature patch (M and degenerate patch (D. To study the mechanisms maintaining diversity in subalpine coniferous forests, species presence frequency and diversity in the four distinct patch types (G, B, M and D of Larix chinensis conifer forests at three altitudinal gradients in the Qinling Mountains were analyzed. Our results were as follows: (1 Different species (or functional groups had distinct presence frequencies in the four different patch types along the altitudinal gradient; (2 Some species or functional groups (species groups sharing similar traits and responses to the environment only occurred in some specific patches. For seed dispersal, species using wind mainly occurred in G and D, while species using small animals mainly occurred in B and M; (3 Species composition of adjacent patch types was more similar than non-adjacent patch types, based on the lower β diversity index of the former; (4 The maximum numbers of species and two diversity indices (D′ and H′ were found in the middle altitudes. Various gap-forming processes and dispersal limitation may be the two major mechanisms determining species diversity in Larix chinensis coniferous forests at the patch scale.

  6. Ecotypic differences in the phenology of the tundra species Eriophorum vaginatum reflect sites of origin.

    Science.gov (United States)

    Parker, Thomas C; Tang, Jianwu; Clark, Mahalia B; Moody, Michael M; Fetcher, Ned

    2017-11-01

    Eriophorum vaginatum is a tussock-forming sedge that contributes significantly to the structure and primary productivity of moist acidic tussock tundra. Locally adapted populations (ecotypes) have been identified across the geographical distribution of E. vaginatum ; however, little is known about how their growth and phenology differ over the course of a growing season. The growing season is short in the Arctic and therefore exerts a strong selection pressure on tundra species. This raises the hypothesis that the phenology of arctic species may be poorly adapted if the timing and length of the growing season change. Mature E. vaginatum tussocks from across a latitudinal gradient (65-70°N) were transplanted into a common garden at a central location (Toolik Lake, 68°38'N, 149°36'W) where half were warmed using open-top chambers. Over two growing seasons (2015 and 2016), leaf length was measured weekly to track growth rates, timing of senescence, and biomass accumulation. Growth rates were similar across ecotypes and between years and were not affected by warming. However, southern populations accumulated significantly more biomass, largely because they started to senesce later. In 2016, peak biomass and senescence of most populations occurred later than in 2015, probably induced by colder weather at the beginning of the growing season in 2016, which caused a delayed start to growth. The finish was delayed as well. Differences in phenology between populations were largely retained between years, suggesting that the amount of time that these ecotypes grow has been selected by the length of the growing seasons at their respective home sites. As potential growing seasons lengthen, E. vaginatum may be unable to respond appropriately as a result of genetic control and may have reduced fitness in the rapidly warming Arctic tundra.

  7. The influence of recent climate change on tree height growth differs with species and spatial environment.

    Science.gov (United States)

    Messaoud, Yassine; Chen, Han Y H

    2011-02-16

    Tree growth has been reported to increase in response to recent global climate change in controlled and semi-controlled experiments, but few studies have reported response of tree growth to increased temperature and atmospheric carbon dioxide (CO₂) concentration in natural environments. This study addresses how recent global climate change has affected height growth of trembling aspen (Populus tremuloides Michx) and black spruce (Picea mariana Mill B.S.) in their natural environments. We sampled 145 stands dominated by aspen and 82 dominated by spruce over the entire range of their distributions in British Columbia, Canada. These stands were established naturally after fire between the 19th and 20th centuries. Height growth was quantified as total heights of sampled dominant and co-dominant trees at breast-height age of 50 years. We assessed the relationships between 50-year height growth and environmental factors at both spatial and temporal scales. We also tested whether the tree growth associated with global climate change differed with spatial environment (latitude, longitude and elevation). As expected, height growth of both species was positively related to temperature variables at the regional scale and with soil moisture and nutrient availability at the local scale. While height growth of trembling aspen was not significantly related to any of the temporal variables we examined, that of black spruce increased significantly with stand establishment date, the anomaly of the average maximum summer temperature between May-August, and atmospheric CO₂ concentration, but not with the Palmer Drought Severity Index. Furthermore, the increase of spruce height growth associated with recent climate change was higher in the western than in eastern part of British Columbia. This study demonstrates that the response of height growth to recent climate change, i.e., increasing temperature and atmospheric CO₂ concentration, did not only differ with tree species, but

  8. Species-specific difference in antimicrobial susceptibility among viridans group streptococci.

    Science.gov (United States)

    Chun, Sejong; Huh, Hee Jae; Lee, Nam Yong

    2015-03-01

    Viridans group streptococci (VGS) are both commensal microbes and potential pathogens. Increasing resistance to penicillin in VGS is an ongoing issue in the clinical environment. We investigated the difference in susceptibility and resistance to penicillin among various VGS species. In total 1,448 VGS isolated from various clinical specimens were analyzed over a two-yr period. Identification and antimicrobial susceptibility test was performed by the automated VITEK 2 system (bioMerieux, France) or the MicroScan MICroSTREP system (Siemens, Germany). Among the 1,448 isolates, 412 were isolated from blood (28.4%). Streptococcus mitis group was the most frequently isolated (589 isolates, 40.7%), followed by the S. anginosus group (290 isolates, 20.0%), S. sanguinis group (179 isolates, 12.4%) and S. salivarius group (57 isolates, 3.9%). In total, 314 isolates could not be identified up to the species level. The overall non-susceptibility to penicillin was observed to be 40.0% (resistant, 11.2% and intermediately resistant, 28.8%) with uneven distribution among groups; 40.2% in S. sanguinis group (resistant, 5.0% and intermediately resistant, 35.2%), 60.3% in S. mitis group (resistant, 20.9% and intermediately resistant, 39.4%), 78.9% in S. salivarius group (resistant, 8.8% and intermediately resistant, 70.1%), and 6.2% in S. anginosus group (resistant, 1.7% and intermediately resistant, 4.5%). Antimicrobial resistance patterns towards penicillin show differences among various VGS; this should be considered while devising an effective antimicrobial treatment against VGS.

  9. Characteristics of Armillaria species development and their growth at different temperatures

    Directory of Open Access Journals (Sweden)

    Keča Nenad

    2005-01-01

    Full Text Available Previous research shows that 5 Armillaria species are identified in forest ecosystems in Serbia. This paper presents the Pegler's key of species identification based on fruiting bodies - mushrooms. Previous reference data from Serbia refer only to the species A. mellea. Because of the insufficient information on the bioecology of individual species in the genus Armillaria we studied the effect of temperature, as one of the most important ecological factors for the development of mycelium and rhisomorphs.

  10. Comparison of carbon balance in Mediterranean pilot constructed wetlands vegetated with different C4 plant species.

    Science.gov (United States)

    Barbera, Antonio C; Borin, Maurizio; Cirelli, Giuseppe L; Toscano, Attilio; Maucieri, Carmelo

    2015-02-01

    This study investigates carbon dioxide (CO2) and methane (CH4) emissions and carbon (C) budgets in a horizontal subsurface flow pilot-plant constructed wetland (CW) with beds vegetated with Cyperus papyrus L., Chrysopogon zizanioides (L.) Roberty, and Mischantus × giganteus Greef et Deu in the Mediterranean basin (Sicily) during the 1st year of plant growing season. At the end of the vegetative season, M. giganteus showed the higher biomass accumulation (7.4 kg m(-2)) followed by C. zizanioides (5.3 kg m(-2)) and C. papyrus (1.8 kg m(-2)). Significantly higher emissions of CO2 were detected in the summer, while CH4 emissions were maximum during spring. Cumulative CO2 emissions by C. papyrus and C. zizanioides during the monitoring period showed similar trends with final values of about 775 and 1,074 g m(-2), respectively, whereas M. giganteus emitted 3,395 g m(-2). Cumulative CH4 bed emission showed different trends for the three C4 plant species in which total gas release during the study period was for C. papyrus 12.0 g m(-2) and ten times higher for M. giganteus, while C. zizanioides bed showed the greatest CH4 cumulative emission with 240.3 g m(-2). The wastewater organic carbon abatement determined different C flux in the atmosphere. Gas fluxes were influenced both by plant species and monitored months with an average C-emitted-to-C-removed ratio for C. zizanioides, C. papyrus, and M. giganteus of 0.3, 0.5, and 0.9, respectively. The growing season C balances were positive for all vegetated beds with the highest C sequestered in the bed with M. giganteus (4.26 kg m(-2)) followed by C. zizanioides (3.78 kg m(-2)) and C. papyrus (1.89 kg m(-2)). To our knowledge, this is the first paper that presents preliminary results on CO2 and CH4 emissions from CWs vegetated with C4 plant species in Mediterranean basin during vegetative growth.

  11. Element uptake, accumulation, and resorption in leaves of mangrove species with different mechanisms of salt regulation

    Science.gov (United States)

    E. Medina; W. Fernandez; F. Barboza

    2015-01-01

    Element uptake from substrate and resorption capacity of nutrients before leaf shedding are frequently species-specific and difficult to determine in natural settings. We sampled populations of Rhizophora mangle (salt-excluding species) and Laguncularia racemosa (salt-secreting species) in a coastal lagoon in the upper section of the Maracaibo strait in western...

  12. Comparative "Omics" of the Fusarium fujikuroi Species Complex Highlights Differences in Genetic Potential and Metabolite Synthesis

    NARCIS (Netherlands)

    Niehaus, E.-M.; Münsterkötter, M.; Proctor, R.H.; Brown, D.W.; Sharon, A.; Idan, Y.; Oren-Young, L.; Sieber, C.M.; Novák, O.; Pěnčík, A.; Tarkowská, D.; Hromadová, K.; Freeman, S.; Maymon, M.; Elazar, M.; Youssef, S.A.; El-Shabrawy, E.S.M.; Shalaby, A.B.A.; Houterman, P.; Brock, N.L.; Burkhardt, I.; Tsavkelova, E.A.; Dickschat, J.S.; Galuszka, P.; Güldener, U.; Tudzynski, B.

    2016-01-01

    Species of the Fusarium fujikuroi species complex (FFC) cause a wide spectrum of often devastating diseases on diverse agricultural crops, including coffee, fig, mango, maize, rice, and sugarcane. Although species within the FFC are difficult to distinguish by morphology, and their genes often share

  13. Differences in insect resistance between tomato species endemic to the Galapagos Islands

    NARCIS (Netherlands)

    Lucatti, A.F.; Heusden, van A.W.; Vos, de R.C.H.; Visser, R.G.F.; Vosman, B.

    2013-01-01

    Background The Galapagos Islands constitute a highly diverse ecosystem and a unique source of variation in the form of endemic species. There are two endemic tomato species, Solanum galapagense and S. cheesmaniae and two introduced tomato species, S. pimpinellifolium and S. lycopersicum.

  14. Similarities and differences in adult tortoises: a morphological approach and its implication for reproduction and mobility between species

    Directory of Open Access Journals (Sweden)

    Marco A. L. Zuffi

    2007-11-01

    Full Text Available Sexes in Chelonia display marked differences. Sexual size dimorphism (SSD is important in evolutionary biology. Different sexual strategies result in species specific selection. Biometric variation in male and female tortoises of two species is studied. Eighteen biometrics were measured in 75 museum specimens (20 Testudo graeca; 55 T. hermanni. Nine of 18 parameters in T. hermanni and two of 18 in T. graeca were sexually dimorphic. Multivariate analyses (principal component analysis highlighted two components, with bridge length the first and anal divergence the second component. The bridge length can be used to separate sexes and species. Males of both species were most different, whereas females of two species overlapped in body shape measurements. We hypothesise that female similarity could be a by-product of reproductive biology and sexual selection that optimise individual fitness.

  15. Feed intake and milk production in dairy cows fed different grass and legume species: a meta-analysis.

    Science.gov (United States)

    Johansen, M; Lund, P; Weisbjerg, M R

    2018-01-01

    The aim of this meta-analysis was to compare feed intake, milk production, milk composition and organic matter (OM) digestibility in dairy cows fed different grass and legume species. Data from the literature was collected and different data sets were made to compare families (grasses v. legumes, Data set 1), different legume species and grass family (Data set 2), and different grass and legume species (Data set 3+4). The first three data sets included diets where single species or family were fed as the sole forage, whereas the approach in the last data set differed by taking the proportion of single species in the forage part into account allowing diets consisting of both grasses and legumes to be included. The grass species included were perennial ryegrass, annual ryegrass, orchardgrass, timothy, meadow fescue, tall fescue and festulolium, and the legume species included were white clover, red clover, lucerne and birdsfoot trefoil. Overall, dry matter intake (DMI) and milk production were 1.3 and 1.6 kg/day higher, respectively, whereas milk protein and milk fat concentration were 0.5 and 1.4 g/kg lower, respectively, for legume-based diets compared with grass-based diets. When comparing individual legume species with grasses, only red clover resulted in a lower milk protein concentration than grasses. Cows fed white clover and birdsfoot trefoil yielded more milk than cows fed red clover and lucerne, probably caused by a higher OM digestibility of white clover and activity of condensed tannins in birdsfoot trefoil. None of the included grass species differed in DMI, milk production, milk composition or OM digestibility, indicating that different grass species have the same value for milk production, if OM digestibility is comparable. However, the comparison of different grass species relied on few observations, indicating that knowledge regarding feed intake and milk production potential of different grass species is scarce in the literature. In conclusion

  16. Effect of different substrates for organic agriculture in seedling development of traditional species of Solanaceae

    Energy Technology Data Exchange (ETDEWEB)

    Olaria, M.; Nebot, J.F.; Molina, H.; Troncho, P.; Lapeña, P.; Llorens, E.

    2016-11-01

    Sowing of seedlings is one of the most critical processes on the establishment of a crop, since the future development of the plant depends largely on its health when is planted on the field. Moreover, organic agriculture has to deal with the low application of fertilizers and pesticides, which hinder the growth of seedlings. In this work, we studied the big influence of different mixtures of substrates suitable for organic agriculture based on peat, coconut husk and vermicompost in traditional varieties of tomato, pepper and eggplant. Our results indicate that the use of coconut husk based substrates in organic agriculture can reduce the growth of seedlings between 20 and 30% compared with peat-based substrates. Moreover, the plants growth in this substrate showed lower levels of chlorophyll and lower weight, but the results are strongly dependent on the species tested. Comparison between traditional plants demonstrates that traditional varieties are strongly influenced by the substrate, whereas the growth of a commercial variety of tomato barely differs when different substrates are used. The election of the substrate in organic agriculture is critical to the correct development of the plant, especially when traditional plant varieties are used. (Author)

  17. A unified approach to model peripheral nerves across different animal species

    Directory of Open Access Journals (Sweden)

    Elisabetta Giannessi

    2017-11-01

    Full Text Available Peripheral nerves are extremely complex biological structures. The knowledge of their response to stretch is crucial to better understand physiological and pathological states (e.g., due to overstretch. Since their mechanical response is deterministically related to the nature of the external stimuli, theoretical and computational tools were used to investigate their behaviour. In this work, a Yeoh-like polynomial strain energy function was used to reproduce the response of in vitro porcine nerve. Moreover, this approach was applied to different nervous structures coming from different animal species (rabbit, lobster, Aplysia and tested for different amount of stretch (up to extreme ones. Starting from this theoretical background, in silico models of both porcine nerves and cerebro-abdominal connective of Aplysia were built to reproduce experimental data (R2 > 0.9. Finally, bi-dimensional in silico models were provided to reduce computational time of more than 90% with respect to the performances of fully three-dimensional models.

  18. ANTIMICROBIAL ACTIVITY OF NONTRADITIONAL PLANT POLLEN AGAINST DIFFERENT SPECIES OF MICROORGANISMS

    Directory of Open Access Journals (Sweden)

    Miroslava Kačániová

    2014-08-01

    Full Text Available The aim of this study was to detect the antimicrobial activity of four plant pollen samples to pathogenic bacteria, microscopic fungi and yeasts. Pollens of dogwood common (Cornus mas, ray mountain (Secale strictum spp. strictum, pumpkin rape (Cucurbita pepo var. styriaca and grape vine (Vitis vinifera were collected in 2010 in Slovakia. The antimicrobial effects of the four nontraditional plant pollens were tested using the agar well diffusion method. For extraction, 70% ethanol (aqueous, v/v was applied. Antimicrobial susceptibility of five different strains of bacteria - three gram positive (Listeria monocytogenes CCM 4699, Pseudomonas aeruginosa CCM 1960, Staphylococcus aureus CCM 3953 and gram negative (Salmonella enterica CCM 4420, Escherichia coli CCM 3988, as well as three different strains of microscopic fungi, Aspergillus fumigatus, Aspergillus flavus, Aspergillus niger, and three different strains of yeasts Candida albicans, Geotrichum candidum and Rhodotorula mucilaginosa, were examinated. L. monocytogenes was the most sensitive among bacteria to the three ethanol extracts of plant pollen after 24 hours of inoculation, A. flavus and C. albicans were the most sensitive microscopic fungi and yeast species, respectively.

  19. Experimental mixture design as a tool to optimize the growth of various Ganoderma species cultivated on media with different sugars

    Directory of Open Access Journals (Sweden)

    Yit Kheng Goh

    2016-01-01

    Full Text Available The influence of different medium components (glucose, sucrose, and fructose on the growth of different Ganoderma isolates and species was investigated using mixture design. Ten sugar combinations based on three simple sugars were generated with two different concentrations, namely 3.3% and 16.7%, which represented low and high sugar levels, respectively. The media were adjusted to either pH 5 or 8. Ganoderma isolates (two G. boninense from oil palm, one Ganoderma species from coconut palm, G. lingzhi, and G. australe from tower tree grew faster at pH 8. Ganoderma lingzhi proliferated at the slowest rate compared to all other tested Ganoderma species in all the media studied. However, G. boninense isolates grew the fastest. Different Ganoderma species were found to have different sugar preferences. This study illustrated that the mixture design can be used to determine the optimal combinations of sugar or other nutrient/chemical components of media for fungal growth.

  20. Comparative “Omics” of the Fusarium fujikuroi Species Complex Highlights Differences in Genetic Potential and Metabolite Synthesis

    Science.gov (United States)

    Niehaus, Eva-Maria; Münsterkötter, Martin; Proctor, Robert H.; Brown, Daren W.; Sharon, Amir; Idan, Yifat; Oren-Young, Liat; Sieber, Christian M.; Novák, Ondřej; Pěnčík, Aleš; Tarkowská, Danuše; Hromadová, Kristýna; Freeman, Stanley; Maymon, Marcel; Elazar, Meirav; Youssef, Sahar A.; El-Shabrawy, El Said M.; Shalaby, Abdel Baset A.; Houterman, Petra; Brock, Nelson L.; Burkhardt, Immo; Tsavkelova, Elena A.; Dickschat, Jeroen S.; Galuszka, Petr; Güldener, Ulrich; Tudzynski, Bettina

    2016-01-01

    Species of the Fusarium fujikuroi species complex (FFC) cause a wide spectrum of often devastating diseases on diverse agricultural crops, including coffee, fig, mango, maize, rice, and sugarcane. Although species within the FFC are difficult to distinguish by morphology, and their genes often share 90% sequence similarity, they can differ in host plant specificity and life style. FFC species can also produce structurally diverse secondary metabolites (SMs), including the mycotoxins fumonisins, fusarins, fusaric acid, and beauvericin, and the phytohormones gibberellins, auxins, and cytokinins. The spectrum of SMs produced can differ among closely related species, suggesting that SMs might be determinants of host specificity. To date, genomes of only a limited number of FFC species have been sequenced. Here, we provide draft genome sequences of three more members of the FFC: a single isolate of F. mangiferae, the cause of mango malformation, and two isolates of F. proliferatum, one a pathogen of maize and the other an orchid endophyte. We compared these genomes to publicly available genome sequences of three other FFC species. The comparisons revealed species-specific and isolate-specific differences in the composition and expression (in vitro and in planta) of genes involved in SM production including those for phytohormome biosynthesis. Such differences have the potential to impact host specificity and, as in the case of F. proliferatum, the pathogenic versus endophytic life style. PMID:28040774

  1. Differences in sensitivity of native and exotic fish species to changes in river temperature

    Directory of Open Access Journals (Sweden)

    R.S.E.W. LEUVEN, A.J. HENDRIKS, M.A.J. HUIJBREGTS, H.J.R. LENDERS,J. MATTHEWS, G. VAN DER VELDE

    2011-12-01

    Full Text Available This paper describes the effects that temperature changes in the Rhine river distributaries have on native and exotic fish diversity. Site-specific potentially affected fractions (PAFs of the regional fish species pool were derived using species sensitivity distributions (SSDs for water temperature. The number of fish species in the river distributaries has changed remarkably over the last century. The number of native rheophilous species declined up until 1980 due to anthropogenic disturbances such as commercial fishing, river regulation, migration barriers, habitat deterioration and water pollution. In spite of progress in river rehabilitation, the native rheophilous fish fauna has only partially recovered thus far. The total number of species has strongly increased due to the appearance of more exotic species. After the opening of the Rhine-Main-Danube waterway in 1992, many fish species originating from the Ponto-Caspian area colonized the Rhine basin. The yearly minimum and maximum river temperatures at Lobith have increased by circa 4 0C over the period 1908-2010. Exotic species show lower PAFs than native species at both ends of the temperature range. The interspecific variation in the temperature tolerance of exotic fish species was found to be large. Using temporal trends in river temperature allowed past predictions of PAFs to demonstrate that the increase in maximum river temperature negatively affected a higher percentage of native fish species than exotic species. Our results support the hypothesis that alterations of the river Rhine’s temperature regime caused by thermal pollution and global warming limit the full recovery of native fish fauna and facilitate the establishment of exotic species which thereby increases competition between native and exotic species. Thermal refuges are important for the survival of native fish species under extreme summer or winter temperature conditions [Current Zoology 57 (6: 852–862, 2011].

  2. Functional traits of selected mangrove species in Brazil as biological indicators of different environmental conditions

    Energy Technology Data Exchange (ETDEWEB)

    Arrivabene, Hiulana Pereira [Universidade Federal do Espírito Santo, Centro de Ciências Humanas e Naturais, Departamento de Ciências Biológicas, 29075-910 Vitória, Espírito Santo (Brazil); Souza, Iara [Universidade Federal de São Carlos, Centro de Ciências Biológicas e da Saúde, Departamento de Ciências Fisiológicas, 13565-905 São Carlos (Brazil); Có, Walter Luiz Oliveira [Associação Educational de Vitória, Departamento de Biologia, 29053-360 Vitória (Brazil); Rodella, Roberto Antônio [Universidade Estadual Paulista Júlio de Mesquita Filho, Campus de Botucatu, Instituto de Biociências, Departamento de Botânica, C. Postal 510, 18618-000 Botucatu, São Paulo (Brazil); Wunderlin, Daniel Alberto, E-mail: dwunder@fcq.unc.edu.ar [Instituto de Ciencia y Tecnología de Alimentos Córdoba (ICYTAC), CONICET, Dpto. Qca. Orgánica, Fac. Cs. Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, 5000, Córdoba (Argentina); and others

    2014-04-01

    Ecological studies on phenotypic plasticity illustrate the relevance of this phenomenon in nature. Conditions of biota reflect environmental changes, highlighting the adaptability of resident species that can be used as bioindicators of such changes. We report the morpho-anatomical plasticity of leaves of Avicennia schaueriana Stapf and Leechm. ex Moldenke, Laguncularia racemosa (L.) C.F.Gaertn. and Rhizophora mangle L., evaluated in three estuaries (Vitória bay, Santa Cruz and Itaúnas River; state of Espírito Santo, Brazil), considering five areas of mangrove ecosystems with diverse environmental issues. Two sampling sites are part of the Ecological Station Lameirão Island in Vitória bay, close to a harbor. A third sampling site in Cariacica (Vitória bay) is inside the Vitória harbor and also is influenced by domestic sewage. The fourth studied area (Santa Cruz) is part of Piraquê Mangrove Ecological Reservation, while the fifth (Itaúnas River) is a small mangrove, with sandy sediment and greater photosynthetically active radiation, also not strongly influenced by anthropic activity. Results pointed out the morpho-anatomical plasticity in studied species, showing that A. schaueriana and L. racemosa might be considered the most appropriate bioindicators to indicate different settings and environmental conditions. Particularly, the dry mass per leaf area (LMA) of A. schaueriana was the main biomarker measured. In our study, LMA of A. schaueriana was positively correlated with salinity (Spearman 0.71), Mn content (0.81) and pH (0.82) but negatively correlated with phosphorus content (− 0.63). Thus, the evaluation of modification in LMA of A. schaueriana pointed out changes among five studied sites, suggesting its use to reflect changes in the environment, which could be also useful in the future to evaluate the climate change. - Highlights: • We investigated adaptive modifications in plants in response to differences among three estuaries. • We used

  3. Functional traits of selected mangrove species in Brazil as biological indicators of different environmental conditions

    International Nuclear Information System (INIS)

    Arrivabene, Hiulana Pereira; Souza, Iara; Có, Walter Luiz Oliveira; Rodella, Roberto Antônio; Wunderlin, Daniel Alberto

    2014-01-01

    Ecological studies on phenotypic plasticity illustrate the relevance of this phenomenon in nature. Conditions of biota reflect environmental changes, highlighting the adaptability of resident species that can be used as bioindicators of such changes. We report the morpho-anatomical plasticity of leaves of Avicennia schaueriana Stapf and Leechm. ex Moldenke, Laguncularia racemosa (L.) C.F.Gaertn. and Rhizophora mangle L., evaluated in three estuaries (Vitória bay, Santa Cruz and Itaúnas River; state of Espírito Santo, Brazil), considering five areas of mangrove ecosystems with diverse environmental issues. Two sampling sites are part of the Ecological Station Lameirão Island in Vitória bay, close to a harbor. A third sampling site in Cariacica (Vitória bay) is inside the Vitória harbor and also is influenced by domestic sewage. The fourth studied area (Santa Cruz) is part of Piraquê Mangrove Ecological Reservation, while the fifth (Itaúnas River) is a small mangrove, with sandy sediment and greater photosynthetically active radiation, also not strongly influenced by anthropic activity. Results pointed out the morpho-anatomical plasticity in studied species, showing that A. schaueriana and L. racemosa might be considered the most appropriate bioindicators to indicate different settings and environmental conditions. Particularly, the dry mass per leaf area (LMA) of A. schaueriana was the main biomarker measured. In our study, LMA of A. schaueriana was positively correlated with salinity (Spearman 0.71), Mn content (0.81) and pH (0.82) but negatively correlated with phosphorus content (− 0.63). Thus, the evaluation of modification in LMA of A. schaueriana pointed out changes among five studied sites, suggesting its use to reflect changes in the environment, which could be also useful in the future to evaluate the climate change. - Highlights: • We investigated adaptive modifications in plants in response to differences among three estuaries. • We used

  4. Trait differences between naturalized and invasive plant species independent of residence time and phylogeny

    Science.gov (United States)

    Gallagher, R V; Randall, R P; Leishman, M R

    2015-01-01

    The ability to predict which alien plants will transition from naturalized to invasive prior to their introduction to novel regions is a key goal for conservation and has the potential to increase the efficacy of weed risk assessment (WRA). However, multiple factors contribute to plant invasion success (e.g., functional traits, range characteristics, residence time, phylogeny), and they all must be taken into account simultaneously in order to identify meaningful correlates of invasion success. We compiled 146 pairs of phylogenetically paired (congeneric) naturalized and invasive plant species in Australia with similar minimum residence times (i.e., time since introduction in years). These pairs were used to test for differences in 5 functional traits (flowering duration, leaf size, maximum height, specific leaf area [SLA], seed mass) and 3 characteristics of species’ native ranges (biome occupancy, mean annual temperature, and rainfall breadth) between naturalized and invasive species. Invasive species, on average, had larger SLA, longer flowering periods, and were taller than their congeneric naturalized relatives. Invaders also exhibited greater tolerance for different environmental conditions in the native range, where they occupied more biomes and a wider breadth of rainfall and temperature conditions than naturalized congeners. However, neither seed mass nor leaf size differed between pairs of naturalized and invasive species. A key finding was the role of SLA in distinguishing between naturalized and invasive pairs. Species with high SLA values were typically associated with faster growth rates, more rapid turnover of leaf material, and shorter lifespans than those species with low SLA. This suite of characteristics may contribute to the ability of a species to transition from naturalized to invasive across a wide range of environmental contexts and disturbance regimes. Our findings will help in the refinement of WRA protocols, and we advocate the

  5. The Removal of Confidor Pesticide by Different Species of Trichoderma Fungi from Contaminated Waters

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    Hossein Banejad

    2017-01-01

    Full Text Available Introduction: Pesticides are considered as the most important pollutants in surface water and groundwater. Neonicotinoids are new group of insecticides, derived from nicotine. Their physicochemical properties render them useful for a wide range of application techniques, including foliar, seed treatment, soil drench and stem applications. Confidor, the representative of the first generation of neonicotinoid insecticides, was patented in 1985 by Bayer and was placed on the market in 1991. The Canadian Pest Management Regulatory Agency considers confidor to have high potential for surface water contamination, leaching to groundwater and persistence in soils. Biodegradation is one of the most effective ways to destroy pesticides in the environment. The application of Bioremediation techniques is taken into consideration as an option to reduce or remove pollutants from the environment due to their low cost, high efficiency and environmentally friendly features. Bioremediation by using microorganisms has not any adverse effect after cleanup. The accumulator microorganism species, haven’t pathogenic properties and aren’t the cause of disease on the other organisms. The selection of a biomass for using in bioremediation is very important, it should be abundant in environment and adapted to environmental conditions. The aim of this study was to investigate the ability of various species of Trichoderma fungi to remove Confidor from contaminated water influenced by variables like pH, concentration of the confidor and time. Materials and Methods: In order to conduct this study three different fungal species belonging to the genus Trichoderma were used. The samples were transferred to PDA (Potato Dextrose Agar sterile solid media for in vitro testing usage. The samples were kept in refrigerator at 4◦C temperature, after the fungal biomass reached to maximal growth; the colonies were transferred to new media and used in our experiments as resources

  6. Species diversity of sandflies (Diptera: Psychodidae) during different seasons and in different environments in the district of Taquaruçú, state of Tocantins, Brazil.

    Science.gov (United States)

    Machado, Tâmara Oliveira; Bragança, Marcos Antônio Lima; Carvalho, Muzenilha Lima; Andrade Filho, José Dilermando

    2012-11-01

    Phlebotomine sandflies are the vectors for the protozoan parasites that cause leishmaniasis. The present study investigated the species composition of sandfly fauna in the rural district of Taquaruçú, municipality of Palmas, state of Tocantins, Brazil and compared the diversity of species among intradomicile, peridomicile and forest environments during the dry and rainy seasons. Sandflies were collected using CDC light traps over the course of three months during the dry and rainy seasons. A total of 767 specimens were captured, belonging to different 32 species. The most abundant species were Micropygomyia goiana (Martins, Falcão & Silva), Sciopemyia sordellii (Shannon & Del Ponte), Evandromyia carmelinoi (Ryan Fraiha, Lainson & Shaw), Evandromyia termitophila (Martins, Falcão & Silva), Nyssomyia whitmani (Antunes & Coutinho) and Lutzomyia longipalpis (Lutz & Neiva). The highest species diversity (30) and the greatest percentage of specimens (78.3%) were obtained during the rainy season. During the dry season, the species richness and abundance were greater in domestic environments. However, during the rainy season, the forest displayed the highest species richness and the domestic environment exhibited the greatest species abundance. Several important vector species are reported in this study.

  7. Difference in root K+ retention ability and reduced sensitivity of K+-permeable channels to reactive oxygen species confer differential salt tolerance in three Brassica species.

    Science.gov (United States)

    Chakraborty, Koushik; Bose, Jayakumar; Shabala, Lana; Shabala, Sergey

    2016-08-01

    Brassica species are known to possess significant inter and intraspecies variability in salinity stress tolerance, but the cell-specific mechanisms conferring this difference remain elusive. In this work, the role and relative contribution of several key plasma membrane transporters to salinity stress tolerance were evaluated in three Brassica species (B. napus, B. juncea, and B. oleracea) using a range of electrophysiological assays. Initial root growth assay and viability staining revealed that B. napus was most tolerant amongst the three species, followed by B. juncea and B. oleracea At the mechanistic level, this difference was conferred by at least three complementary physiological mechanisms: (i) higher Na(+) extrusion ability from roots resulting from increased expression and activity of plasma membrane SOS1-like Na(+)/H(+) exchangers; (ii) better root K(+) retention ability resulting from stress-inducible activation of H(+)-ATPase and ability to maintain more negative membrane potential under saline conditions; and (iii) reduced sensitivity of B. napus root K(+)-permeable channels to reactive oxygen species (ROS). The last two mechanisms played the dominant role and conferred most of the differential salt sensitivity between species. Brassica napus plants were also more efficient in preventing the stress-induced increase in GORK transcript levels and up-regulation of expression of AKT1, HAK5, and HKT1 transporter genes. Taken together, our data provide the mechanistic explanation for differential salt stress sensitivity amongst these species and shed light on transcriptional and post-translational regulation of key ion transport systems involved in the maintenance of the root plasma membrane potential and cytosolic K/Na ratio as a key attribute for salt tolerance in Brassica species. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  8. Mare’s milk: composition and protein fraction in comparison with different milk species

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    Krešimir Kuterovac

    2011-06-01

    Full Text Available The usage of the mare’s milk as functional food especial for children intolerant to cow’s milk, with neurodermitis, allergies and similar disorders desiring to improve the quality of life is fiercely debated for last decades but there were no scientific studies to suggest such use of mare’s milk based on scientific research. The objectives of this study were to determine similarities of mare’s milk in comparison with milk of ruminants (cattle, sheep and goat and human milk in terms of milk composition and protein fraction as whey proteins, caseins and micelles size. All differences were discussed regarding usage of mare’s milk in human diet and compared to milk which is usually used in human nutrition. Regarding composition, the mare’s milk is similar to human milk in of crude protein, salt and lactose content, but it has significantly lower content of fat. Fractions of main proteins are similar between human and mare’s milk, except nitrogen casein (casein N which has twice lower content in human than in mare’s milk. Content of casein N from all ruminants’ milk differ much more. Just for true whey N and non-protein nitrogen (NPN similar content as human and mare’s milk has also goat milk. The casein content is the lowest in human milk; this content is three times greater in mare’s milk and six to seven times greater in goat’s and cow’s milk, while in sheep’s milk it is more than 10 times grater. In many components and fractions mare’s milk is more similar to human milk than milk of ruminants. A detail comparison of protein fraction shows quite large differences between milk of different species. More study and clinical research are needed that can recommend usage of mare’s milk in human diet as functional food on scientific bases.

  9. Differences between height- and light-dependent changes in shoot traits in five deciduous tree species.

    Science.gov (United States)

    Osada, Noriyuki; Okabe, Yoshihiko; Hayashi, Daisuke; Katsuyama, Tomonori; Tokuchi, Naoko

    2014-01-01

    The effects of tree height on shoot traits may in some cases differ in magnitude and direction from the effects of light. Nevertheless, general patterns of change in shoot traits in relation to variations in height and light have not so far been revealed. A comprehensive analysis of the differences between the effects of height and light on a range of leaf and shoot traits is important for the scaling of these traits to individual trees. We investigated the biomass allocation and structure of current-year shoots at the top of the crowns of five deciduous tree species in Japan. Height effect was investigated by comparing shoot traits among trees of different heights growing under a high light environment. The effects of light were examined by comparing saplings growing in high- and low-light environments. The effects of light were significant for most traits, while those of height were not significant for some traits. The magnitudes of the effects of light were larger than those of height for most traits related to biomass allocation. There was an extreme difference between the effects of height and light in the direction of change in the length of current-year shoots and in the number of standing leaves. The measures of both parameters increased with the increase in light, but decreased with the increase in tree height. Thus, the effects of height and light on diverse traits at the level of current-year shoots were not always similar. These results suggest that great care must be taken when scaling shoot traits from small trees to tall trees because the effects of height and light can be complex.

  10. Plant regeneration and somatic embryogenesis from immature embryos derived through interspecific hybridization among different Carica species.

    Science.gov (United States)

    Azad, Md Abul Kalam; Rabbani, Md Golam; Amin, Latifah

    2012-12-12

    Plant regeneration and somatic embryogenesis through interspecific hybridization among different Carica species were studied for the development of a papaya ringspot virus-resistant variety. The maximum fruit sets were recorded from the cross of the native variety C. papaya cv. Shahi with the wild species C. cauliflora. The highest hybrid embryos were recorded at 90 days after pollination and the embryos were aborted at 150 days after pollination. The immature hybrid embryos were used for plant regeneration and somatic embryogenesis. The 90-day-old hybrid embryos from the cross of C. papaya cv. Shahi × C. cauliflora showed the highest percentage of germination, as well as plant regeneration on growth regulators free culture medium after 7 days pre-incubation on half-strength MS medium supplemented with 0.2 mg/L BAP, 0.5 mg/L NAA and 60 g/L sucrose. The 90-day-old hybrid embryos from the cross of C. papaya cv. Shahi × C. cauliflora produced maximum callus, as well as somatic embryos when cultured on half-strength MS medium containing 5 mg/L 2,4-D, 100 mg/L glutamine, 100 mg/L casein hydrolysate and 60 g/L sucrose. The somatic embryos were transferred into half-strength MS medium containing 0.5 mg/L BAP and 0.2 mg/L NAA and 60 g/L sucrose for maturation. The highest number of regenerated plants per hybrid embryo (10.33) was recorded from the cross of C. papaya cv. Shahi × C. cauliflora. Isoenzyme and dendrogram cluster analysis using UPGMA of the regenerated F(1) plantlets confirmed the presence of the hybrid plantlets.

  11. Different phylogenomic approaches to resolve the evolutionary relationships among model fish species.

    Science.gov (United States)

    Negrisolo, Enrico; Kuhl, Heiner; Forcato, Claudio; Vitulo, Nicola; Reinhardt, Richard; Patarnello, Tomaso; Bargelloni, Luca

    2010-12-01

    Comparative genomics holds the promise to magnify the information obtained from individual genome sequencing projects, revealing common features conserved across genomes and identifying lineage-specific characteristics. To implement such a comparative approach, a robust phylogenetic framework is required to accurately reconstruct evolution at the genome level. Among vertebrate taxa, teleosts represent the second best characterized group, with high-quality draft genome sequences for five model species (Danio rerio, Gasterosteus aculeatus, Oryzias latipes, Takifugu rubripes, and Tetraodon nigroviridis), and several others are in the finishing lane. However, the relationships among the acanthomorph teleost model fishes remain an unresolved taxonomic issue. Here, a genomic region spanning over 1.2 million base pairs was sequenced in the teleost fish Dicentrarchus labrax. Together with genomic data available for the above fish models, the new sequence was used to identify unique orthologous genomic regions shared across all target taxa. Different strategies were applied to produce robust multiple gene and genomic alignments spanning from 11,802 to 186,474 amino acid/nucleotide positions. Ten data sets were analyzed according to Bayesian inference, maximum likelihood, maximum parsimony, and neighbor joining methods. Extensive analyses were performed to explore the influence of several factors (e.g., alignment methodology, substitution model, data set partitions, and long-branch attraction) on the tree topology. Although a general consensus was observed for a closer relationship between G. aculeatus (Gasterosteidae) and Di. labrax (Moronidae) with the atherinomorph O. latipes (Beloniformes) sister taxon of this clade, with the tetraodontiform group Ta. rubripes and Te. nigroviridis (Tetraodontiformes) representing a more distantly related taxon among acanthomorph model fish species, conflicting results were obtained between data sets and methods, especially with respect

  12. Chemical Composition, Nitrogen Fractions and Amino Acids Profile of Milk from Different Animal Species

    Directory of Open Access Journals (Sweden)

    Saima Rafiq

    2016-07-01

    Full Text Available Milk composition is an imperative aspect which influences the quality of dairy products. The objective of study was to compare the chemical composition, nitrogen fractions and amino acids profile of milk from buffalo, cow, sheep, goat, and camel. Sheep milk was found to be highest in fat (6.82%±0.04%, solid-not-fat (11.24%±0.02%, total solids (18.05%±0.05%, protein (5.15%±0.06% and casein (3.87%±0.04% contents followed by buffalo milk. Maximum whey proteins were observed in camel milk (0.80%±0.03%, buffalo (0.68%±0.02% and sheep (0.66%±0.02% milk. The non-protein-nitrogen contents varied from 0.33% to 0.62% among different milk species. The highest r-values were recorded for correlations between crude protein and casein in buffalo (r = 0.82, cow (r = 0.88, sheep (r = 0.86 and goat milk (r = 0.98. The caseins and whey proteins were also positively correlated with true proteins in all milk species. A favorable balance of branched-chain amino acids; leucine, isoleucine, and valine were found both in casein and whey proteins. Leucine content was highest in cow (108±2.3 mg/g, camel (96±2.2 mg/g and buffalo (90±2.4 mg/g milk caseins. Maximum concentrations of isoleucine, phenylalanine, and histidine were noticed in goat milk caseins. Glutamic acid and proline were dominant among non-essential amino acids. Conclusively, current exploration is important for milk processors to design nutritious and consistent quality end products.

  13. A survey of the interaction of calcium ions with mitochondria from different tissues and species

    Science.gov (United States)

    Carafoli, Ernesto; Lehninger, Albert L.

    1971-01-01

    A survey was made of the capacity of mitochondria isolated from a number of different tissues and species to accumulate Ca2+ from the suspending medium during electron transport. The species examined included the rat, mouse, rabbit, hamster, guinea pig, cow, chicken, turtle, blowfly, yeast and Neurospora crassa. The tissues examined included vertebrate liver, kidney, brain, heart, spleen, thyroid and adrenal cortex, and the flight muscle of the blowfly. The mitochondria from all vertebrate tissues examined showed: (a) stimulation of State 4 respiration by added Ca2+ (Ca2+/~ activation ratio about 2.0), accompanied by accumulation of Ca2+ and ejection of H+, with a H+/Ca2+ ratio about 1.0; (b) a requirement of phosphate for accumulation of large amounts of Ca2+; (c) respiration-independent high-affinity binding sites for Ca2+; (d) endogenous Ca2+, which is largely released by uncoupling agents. However, mitochondria from yeast and blowfly flight muscle are unable to accumulate Ca2+ in a respiration-dependent process and possess no high-affinity Ca2+-binding sites. These findings support the view that the high-affinity sites represent the ligand-binding sites of a specific Ca2+ `permease' or transport system in the membrane. The relatively high affinity for Ca2+, which equals or exceeds the affinity for ADP, and the generally uniform characteristics of Ca2+ transport in all the vertebrate mitochondria tested strongly suggest that respiration-linked Ca2+ accumulation plays a general and fundamental role in vertebrate cell physiology. PMID:5129264