High-throughput isolation of giant viruses in liquid medium using automated flow cytometry and fluorescence staining.

Directory of Open Access Journals (Sweden)

Jacques Yaacoub Bou Khalil

2016-01-01

Full Text Available The isolation of giant viruses using amoeba co-culture is tedious and fastidious. Recently, the procedure was successfully associated with a method that detects amoebal lysis on agar plates. However, the procedure remains time-consuming and is limited to protozoa growing on agar. We present here advances for the isolation of giant viruses. A high-throughput automated method based on flow cytometry and fluorescent staining was used to detect the presence of giant viruses in liquid medium. Development was carried out with the Acanthamoeba polyphaga strain widely used in past and current co-culture experiments. The proof of concept was validated with virus suspensions: artificially contaminated samples but also environmental samples from which viruses were previously isolated. After validating the technique, and fortuitously isolating a new Mimivirus, we automated the technique on 96-well plates and tested it on clinical and environmental samples using other protozoa. This allowed us to detect more than ten strains of previously known species of giant viruses and 7 new strains of a new virus lineage. This automated high-throughput method demonstrated significant time saving, and higher sensitivity than older techniques. It thus creates the means to isolate giant viruses at high speed.

Fully automated quantification of regional cerebral blood flow with three-dimensional stereotaxic region of interest template. Validation using magnetic resonance imaging. Technical note

Energy Technology Data Exchange (ETDEWEB)

Takeuchi, Ryo; Katayama, Shigenori; Takeda, Naoya; Fujita, Katsuzo [Nishi-Kobe Medical Center (Japan); Yonekura, Yoshiharu [Fukui Medical Univ., Matsuoka (Japan); Konishi, Junji [Kyoto Univ. (Japan). Graduate School of Medicine

2003-03-01

The previously reported three-dimensional stereotaxic region of interest (ROI) template (3DSRT-t) for the analysis of anatomically standardized technetium-99m-L,L-ethyl cysteinate dimer ({sup 99m}Tc-ECD) single photon emission computed tomography (SPECT) images was modified for use in a fully automated regional cerebral blood flow (rCBF) quantification software, 3DSRT, incorporating an anatomical standardization engine transplanted from statistical parametric mapping 99 and ROIs for quantification based on 3DSRT-t. Three-dimensional T{sub 2}-weighted magnetic resonance images of 10 patients with localized infarcted areas were compared with the ROI contour of 3DSRT, and the positions of the central sulcus in the primary sensorimotor area were also estimated. All positions of the 20 lesions were in strict accordance with the ROI delineation of 3DSRT. The central sulcus was identified on at least one side of 210 paired ROIs and in the middle of 192 (91.4%) of these 210 paired ROIs among the 273 paired ROIs of the primary sensorimotor area. The central sulcus was recognized in the middle of more than 71.4% of the ROIs in which the central sulcus was identifiable in the respective 28 slices of the primary sensorimotor area. Fully automated accurate ROI delineation on anatomically standardized images is possible with 3DSRT, which enables objective quantification of rCBF and vascular reserve in only a few minutes using {sup 99m}Tc-ECD SPECT images obtained by the resting and vascular reserve (RVR) method. (author)

Fully automated quantification of regional cerebral blood flow with three-dimensional stereotaxic region of interest template. Validation using magnetic resonance imaging. Technical note

International Nuclear Information System (INIS)

Takeuchi, Ryo; Katayama, Shigenori; Takeda, Naoya; Fujita, Katsuzo; Yonekura, Yoshiharu; Konishi, Junji

2003-01-01

The previously reported three-dimensional stereotaxic region of interest (ROI) template (3DSRT-t) for the analysis of anatomically standardized technetium-99m-L,L-ethyl cysteinate dimer ( 99m Tc-ECD) single photon emission computed tomography (SPECT) images was modified for use in a fully automated regional cerebral blood flow (rCBF) quantification software, 3DSRT, incorporating an anatomical standardization engine transplanted from statistical parametric mapping 99 and ROIs for quantification based on 3DSRT-t. Three-dimensional T 2 -weighted magnetic resonance images of 10 patients with localized infarcted areas were compared with the ROI contour of 3DSRT, and the positions of the central sulcus in the primary sensorimotor area were also estimated. All positions of the 20 lesions were in strict accordance with the ROI delineation of 3DSRT. The central sulcus was identified on at least one side of 210 paired ROIs and in the middle of 192 (91.4%) of these 210 paired ROIs among the 273 paired ROIs of the primary sensorimotor area. The central sulcus was recognized in the middle of more than 71.4% of the ROIs in which the central sulcus was identifiable in the respective 28 slices of the primary sensorimotor area. Fully automated accurate ROI delineation on anatomically standardized images is possible with 3DSRT, which enables objective quantification of rCBF and vascular reserve in only a few minutes using 99m Tc-ECD SPECT images obtained by the resting and vascular reserve (RVR) method. (author)

Automated estimation of defects in magnetographic defectoscopy. 1. Automated magnetographic flow detectors

International Nuclear Information System (INIS)

Mikhajlov, S.P.; Vaulin, S.L.; Shcherbinin, V.E.; Shur, M.L.

1993-01-01

Consideration is given to specific features and possible functions of equipment for automated estimation of stretched continuity defects for samples with plane surface in magnetographic defectoscopy are discussed. Two models of automated magnetographic flow detectors, those with built-in microcomputer and in the form computer attachment, are described. Directions of further researches and development are discussed. 35 refs., 6 figs

Advances in Automated Plankton Imaging: Enhanced Throughput, Automated Staining, and Extended Deployment Modes for Imaging FlowCytobot

Science.gov (United States)

Sosik, H. M.; Olson, R. J.; Brownlee, E.; Brosnahan, M.; Crockford, E. T.; Peacock, E.; Shalapyonok, A.

2016-12-01

Imaging FlowCytobot (IFCB) was developed to fill a need for automated identification and monitoring of nano- and microplankton, especially phytoplankton in the size range 10 200 micrometer, which are important in coastal blooms (including harmful algal blooms). IFCB uses a combination of flow cytometric and video technology to capture high resolution (1 micrometer) images of suspended particles. This proven, now commercially available, submersible instrument technology has been deployed in fixed time series locations for extended periods (months to years) and in shipboard laboratories where underway water is automatically analyzed during surveys. Building from these successes, we have now constructed and evaluated three new prototype IFCB designs that extend measurement and deployment capabilities. To improve cell counting statistics without degrading image quality, a high throughput version (IFCB-HT) incorporates in-flow acoustic focusing to non-disruptively pre-concentrate cells before the measurement area of the flow cell. To extend imaging to all heterotrophic cells (even those that do not exhibit chlorophyll fluorescence), Staining IFCB (IFCB-S) incorporates automated addition of a live-cell fluorescent stain (fluorescein diacetate) to samples before analysis. A horizontally-oriented IFCB-AV design addresses the need for spatial surveying from surface autonomous vehicles, including design features that reliably eliminate air bubbles and mitigate wave motion impacts. Laboratory evaluation and test deployments in waters near Woods Hole show the efficacy of each of these enhanced IFCB designs.

Characterization of the supersonic flowing microwave discharge using two dimensional plasma tomography

Energy Technology Data Exchange (ETDEWEB)

Nikolic, M.; Samolov, A.; Popovic, S.; Vuskovic, L.; Godunov, A. [Department of Physics, Center for Accelerator Science, Old Dominion University, Norfolk, Virginia 23529 (United States); Cuckov, F. [Department of Electrical and Computer Engineering, Old Dominion University, Norfolk, Virginia 23529 (United States)

2013-03-14

A tomographic numerical method based on the two-dimensional Radon formula for a cylindrical cavity has been employed for obtaining spatial distributions of the argon excited levels. The spectroscopy measurements were taken at different positions and directions to observe populations of excited species in the plasmoid region and the corresponding excitation temperatures. Excited argon states are concentrated near the tube walls, thus, confirming the assumption that the post discharge plasma is dominantly sustained by travelling surface wave. An automated optical measurement system has been developed for reconstruction of local plasma parameters of the plasmoid structure formed in an argon supersonic flowing microwave discharge. The system carries out angle and distance measurements using a rotating, flat mirror, as well as two high precision stepper motors operated by a microcontroller-based system and several sensors for precise feedback control.

Cellular-automation fluids: A model for flow in porous media

International Nuclear Information System (INIS)

Rothman, D.H.

1987-01-01

Because the intrinsic inhomogeneity of porous media makes the application of proper boundary conditions difficult, fluid flow through microgeometric models has typically been achieved with idealized arrays of geometrically simple pores, throats, and cracks. The author proposes here an attractive alternative, capable of freely and accurately modeling fluid flow in grossly irregular geometries. This new method numerically solves the Navier-Stokes equations using the cellular-automation fluid model introduced by Frisch, Hasslacher, and Pomeau. The cellular-automation fluid is extraordinarily simple - particles of unit mass traveling with unit velocity reside on a triangular lattice and obey elementary collisions rules - but capable of modeling much of the rich complexity of real fluid flow. The author shows how cellular-automation fluids are applied to the study of porous media. In particular, he discusses issues of scale on the cellular-automation lattice and present the results of 2-D simulations, including numerical estimation of permeability and verification of Darcy's law

Subspace Dimensionality: A Tool for Automated QC in Seismic Array Processing

Science.gov (United States)

Rowe, C. A.; Stead, R. J.; Begnaud, M. L.

2013-12-01

Because of the great resolving power of seismic arrays, the application of automated processing to array data is critically important in treaty verification work. A significant problem in array analysis is the inclusion of bad sensor channels in the beamforming process. We are testing an approach to automated, on-the-fly quality control (QC) to aid in the identification of poorly performing sensor channels prior to beam-forming in routine event detection or location processing. The idea stems from methods used for large computer servers, when monitoring traffic at enormous numbers of nodes is impractical on a node-by node basis, so the dimensionality of the node traffic is instead monitoried for anomalies that could represent malware, cyber-attacks or other problems. The technique relies upon the use of subspace dimensionality or principal components of the overall system traffic. The subspace technique is not new to seismology, but its most common application has been limited to comparing waveforms to an a priori collection of templates for detecting highly similar events in a swarm or seismic cluster. In the established template application, a detector functions in a manner analogous to waveform cross-correlation, applying a statistical test to assess the similarity of the incoming data stream to known templates for events of interest. In our approach, we seek not to detect matching signals, but instead, we examine the signal subspace dimensionality in much the same way that the method addresses node traffic anomalies in large computer systems. Signal anomalies recorded on seismic arrays affect the dimensional structure of the array-wide time-series. We have shown previously that this observation is useful in identifying real seismic events, either by looking at the raw signal or derivatives thereof (entropy, kurtosis), but here we explore the effects of malfunctioning channels on the dimension of the data and its derivatives, and how to leverage this effect for

Two-dimensional turbulent flows on a bounded domain

NARCIS (Netherlands)

Kramer, W.

2006-01-01

Large-scale flows in the oceans and the atmosphere reveal strong similarities with purely two-dimensional flows. One of the most typical features is the cascade of energy from smaller flow scales towards larger scales. This is opposed to three-dimensional turbulence where larger flow structures

Hydraulic performance numerical simulation of high specific speed mixed-flow pump based on quasi three-dimensional hydraulic design method

International Nuclear Information System (INIS)

Zhang, Y X; Su, M; Hou, H C; Song, P F

2013-01-01

This research adopts the quasi three-dimensional hydraulic design method for the impeller of high specific speed mixed-flow pump to achieve the purpose of verifying the hydraulic design method and improving hydraulic performance. Based on the two families of stream surface theory, the direct problem is completed when the meridional flow field of impeller is obtained by employing iterative calculation to settle the continuity and momentum equation of fluid. The inverse problem is completed by using the meridional flow field calculated in the direct problem. After several iterations of the direct and inverse problem, the shape of impeller and flow field information can be obtained finally when the result of iteration satisfies the convergent criteria. Subsequently the internal flow field of the designed pump are simulated by using RANS equations with RNG k-ε two-equation turbulence model. The static pressure and streamline distributions at the symmetrical cross-section, the vector velocity distribution around blades and the reflux phenomenon are analyzed. The numerical results show that the quasi three-dimensional hydraulic design method for high specific speed mixed-flow pump improves the hydraulic performance and reveal main characteristics of the internal flow of mixed-flow pump as well as provide basis for judging the rationality of the hydraulic design, improvement and optimization of hydraulic model

A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements

Energy Technology Data Exchange (ETDEWEB)

Orton, Daniel J. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Tfaily, Malak M. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Moore, Ronald J. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; LaMarche, Brian L. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Zheng, Xueyun [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Fillmore, Thomas L. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Chu, Rosalie K. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Weitz, Karl K. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Monroe, Matthew E. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Kelly, Ryan T. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Smith, Richard D. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States; Baker, Erin S. [Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, United States

2017-12-13

To better understand disease conditions and environmental perturbations, multi-omic studies (i.e. proteomic, lipidomic, metabolomic, etc. analyses) are vastly increasing in popularity. In a multi-omic study, a single sample is typically extracted in multiple ways and numerous analyses are performed using different instruments. Thus, one sample becomes many analyses, making high throughput and reproducible evaluations a necessity. One way to address the numerous samples and varying instrumental conditions is to utilize a flow injection analysis (FIA) system for rapid sample injection. While some FIA systems have been created to address these challenges, many have limitations such as high consumable costs, low pressure capabilities, limited pressure monitoring and fixed flow rates. To address these limitations, we created an automated, customizable FIA system capable of operating at diverse flow rates (~50 nL/min to 500 µL/min) to accommodate low- and high-flow instrument sources. This system can also operate at varying analytical throughputs from 24 to 1200 samples per day to enable different MS analysis approaches. Applications ranging from native protein analyses to molecular library construction were performed using the FIA system. The results from these studies showed a highly robust platform, providing consistent performance over many days without carryover as long as washing buffers specific to each molecular analysis were utilized.

Visualizing vector field topology in fluid flows

Science.gov (United States)

Helman, James L.; Hesselink, Lambertus

1991-01-01

Methods of automating the analysis and display of vector field topology in general and flow topology in particular are discussed. Two-dimensional vector field topology is reviewed as the basis for the examination of topology in three-dimensional separated flows. The use of tangent surfaces and clipping in visualizing vector field topology in fluid flows is addressed.

Automated Blood Sample Preparation Unit (ABSPU) for Portable Microfluidic Flow Cytometry.

Science.gov (United States)

Chaturvedi, Akhil; Gorthi, Sai Siva

2017-02-01

Portable microfluidic diagnostic devices, including flow cytometers, are being developed for point-of-care settings, especially in conjunction with inexpensive imaging devices such as mobile phone cameras. However, two pervasive drawbacks of these have been the lack of automated sample preparation processes and cells settling out of sample suspensions, leading to inaccurate results. We report an automated blood sample preparation unit (ABSPU) to prevent blood samples from settling in a reservoir during loading of samples in flow cytometers. This apparatus automates the preanalytical steps of dilution and staining of blood cells prior to microfluidic loading. It employs an assembly with a miniature vibration motor to drive turbulence in a sample reservoir. To validate performance of this system, we present experimental evidence demonstrating prevention of blood cell settling, cell integrity, and staining of cells prior to flow cytometric analysis. This setup is further integrated with a microfluidic imaging flow cytometer to investigate cell count variability. With no need for prior sample preparation, a drop of whole blood can be directly introduced to the setup without premixing with buffers manually. Our results show that integration of this assembly with microfluidic analysis provides a competent automation tool for low-cost point-of-care blood-based diagnostics.

Automated three-dimensional X-ray analysis using a dual-beam FIB

International Nuclear Information System (INIS)

Schaffer, Miroslava; Wagner, Julian; Schaffer, Bernhard; Schmied, Mario; Mulders, Hans

2007-01-01

We present a fully automated method for three-dimensional (3D) elemental analysis demonstrated using a ceramic sample of chemistry (Ca)MgTiO x . The specimen is serially sectioned by a focused ion beam (FIB) microscope, and energy-dispersive X-ray spectrometry (EDXS) is used for elemental analysis of each cross-section created. A 3D elemental model is reconstructed from the stack of two-dimensional (2D) data. This work concentrates on issues arising from process automation, the large sample volume of approximately 17x17x10 μm 3 , and the insulating nature of the specimen. A new routine for post-acquisition data correction of different drift effects is demonstrated. Furthermore, it is shown that EDXS data may be erroneous for specimens containing voids, and that back-scattered electron images have to be used to correct for these errors

Analysis of the one-dimensional transient compressible vapor flow in heat pipes

Science.gov (United States)

Jang, Jong H.; Faghri, Amir; Chang, Won S.

1991-01-01

The transient compressible one-dimensional vapor flow dynamics in a heat pipe is modeled. The numerical results are obtained by using the implicit non-iterative Beam-Warming finite difference method. The model is tested for simulated heat pipe vapor flow and actual vapor flow in cylindrical heat pipes. A good comparison of the present transient results for the simulated heat pipe vapor flow with the previous results of a two-dimensional numerical model is achieved and the steady state results are in agreement with the existing experimental data. The transient behavior of the vapor flow under subsonic, sonic, and supersonic speeds as well as high mass flow rates are successfully predicted.

Three-Dimensional Flows

CERN Document Server

Araujo, Vitor; Viana, Marcelo

2010-01-01

In this book, the authors present the elements of a general theory for flows on three-dimensional compact boundaryless manifolds, encompassing flows with equilibria accumulated by regular orbits. The book aims to provide a global perspective of this theory and make it easier for the reader to digest the growing literature on this subject. This is not the first book on the subject of dynamical systems, but there are distinct aspects which together make this book unique. Firstly, this book treats mostly continuous time dynamical systems, instead of its discrete counterpart, exhaustively treated

Improving left ventricular segmentation in four-dimensional flow MRI using intramodality image registration for cardiac blood flow analysis.

Science.gov (United States)

Gupta, Vikas; Bustamante, Mariana; Fredriksson, Alexandru; Carlhäll, Carl-Johan; Ebbers, Tino

2018-01-01

Assessment of blood flow in the left ventricle using four-dimensional flow MRI requires accurate left ventricle segmentation that is often hampered by the low contrast between blood and the myocardium. The purpose of this work is to improve left-ventricular segmentation in four-dimensional flow MRI for reliable blood flow analysis. The left ventricle segmentations are first obtained using morphological cine-MRI with better in-plane resolution and contrast, and then aligned to four-dimensional flow MRI data. This alignment is, however, not trivial due to inter-slice misalignment errors caused by patient motion and respiratory drift during breath-hold based cine-MRI acquisition. A robust image registration based framework is proposed to mitigate such errors automatically. Data from 20 subjects, including healthy volunteers and patients, was used to evaluate its geometric accuracy and impact on blood flow analysis. High spatial correspondence was observed between manually and automatically aligned segmentations, and the improvements in alignment compared to uncorrected segmentations were significant (P  0.05). Our results demonstrate the efficacy of the proposed approach in improving left-ventricular segmentation in four-dimensional flow MRI, and its potential for reliable blood flow analysis. Magn Reson Med 79:554-560, 2018. © 2017 International Society for Magnetic Resonance in Medicine. © 2017 International Society for Magnetic Resonance in Medicine.

Three-dimensional attached viscous flow basic principles and theoretical foundations

CERN Document Server

Hirschel, Ernst Heinrich; Kordulla, Wilhelm

2014-01-01

Viscous flow is usually treated in the frame of boundary-layer theory and as a two-dimensional flow. At best, books on boundary layers provide the describing equations for three-dimensional boundary layers, and solutions only for certain special cases.   This book presents the basic principles and theoretical foundations of three-dimensional attached viscous flows as they apply to aircraft of all kinds. Though the primary flight speed range is that of civil air transport vehicles, flows past other flying vehicles up to hypersonic speeds are also considered. Emphasis is put on general three-dimensional attached viscous flows and not on three-dimensional boundary layers, as this wider scope is necessary in view of the theoretical and practical problems that have to be overcome in practice.   The specific topics covered include weak, strong, and global interaction; the locality principle; properties of three-dimensional viscous flows; thermal surface effects; characteristic properties; wall compatibility con...

A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements.

Science.gov (United States)

Orton, Daniel J; Tfaily, Malak M; Moore, Ronald J; LaMarche, Brian L; Zheng, Xueyun; Fillmore, Thomas L; Chu, Rosalie K; Weitz, Karl K; Monroe, Matthew E; Kelly, Ryan T; Smith, Richard D; Baker, Erin S

2018-01-02

To better understand disease conditions and environmental perturbations, multiomic studies combining proteomic, lipidomic, and metabolomic analyses are vastly increasing in popularity. In a multiomic study, a single sample is typically extracted in multiple ways, and various analyses are performed using different instruments, most often based upon mass spectrometry (MS). Thus, one sample becomes many measurements, making high throughput and reproducible evaluations a necessity. One way to address the numerous samples and varying instrumental conditions is to utilize a flow injection analysis (FIA) system for rapid sample injections. While some FIA systems have been created to address these challenges, many have limitations such as costly consumables, low pressure capabilities, limited pressure monitoring, and fixed flow rates. To address these limitations, we created an automated, customizable FIA system capable of operating at a range of flow rates (∼50 nL/min to 500 μL/min) to accommodate both low- and high-flow MS ionization sources. This system also functions at varying analytical throughputs from 24 to 1200 samples per day to enable different MS analysis approaches. Applications ranging from native protein analyses to molecular library construction were performed using the FIA system, and results showed a highly robust and reproducible platform capable of providing consistent performance over many days without carryover, as long as washing buffers specific to each molecular analysis were utilized.

How we can measure the non-driving-task engagement in automated driving: Comparing flow experience and workload.

Science.gov (United States)

Ko, Sang Min; Ji, Yong Gu

2018-02-01

In automated driving, a driver can completely concentrate on non-driving-related tasks (NDRTs). This study investigated the flow experience of a driver who concentrated on NDRTs and tasks that induce mental workload under conditional automation. Participants performed NDRTs under different demand levels: a balanced demand-skill level (fit condition) to induce flow, low-demand level to induce boredom, and high-demand level to induce anxiety. In addition, they performed the additional N-Back task, which artificially induces mental workload. The results showed participants had the longest reaction time when they indicated the highest flow score, and had the longest gaze-on time, road-fixation time, hands-on time, and take-over time under the fit condition. Significant differences were not observed in the driver reaction times in the fit condition and the additional N-Back task, indicating that performing NDRTs that induce a high flow experience could influence driver reaction time similar to performing tasks with a high mental workload. Copyright © 2017. Published by Elsevier Ltd.

Surface representations of two- and three-dimensional fluid flow topology

Science.gov (United States)

Helman, James L.; Hesselink, Lambertus

1990-01-01

We discuss our work using critical point analysis to generate representations of the vector field topology of numerical flow data sets. Critical points are located and characterized in a two-dimensional domain, which may be either a two-dimensional flow field or the tangential velocity field near a three-dimensional body. Tangent curves are then integrated out along the principal directions of certain classes of critical points. The points and curves are linked to form a skeleton representing the two-dimensional vector field topology. When generated from the tangential velocity field near a body in a three-dimensional flow, the skeleton includes the critical points and curves which provide a basis for analyzing the three-dimensional structure of the flow separation. The points along the separation curves in the skeleton are used to start tangent curve integrations to generate surfaces representing the topology of the associated flow separations.

Universal Verification Methodology Based Register Test Automation Flow.

Science.gov (United States)

Woo, Jae Hun; Cho, Yong Kwan; Park, Sun Kyu

2016-05-01

In today's SoC design, the number of registers has been increased along with complexity of hardware blocks. Register validation is a time-consuming and error-pron task. Therefore, we need an efficient way to perform verification with less effort in shorter time. In this work, we suggest register test automation flow based UVM (Universal Verification Methodology). UVM provides a standard methodology, called a register model, to facilitate stimulus generation and functional checking of registers. However, it is not easy for designers to create register models for their functional blocks or integrate models in test-bench environment because it requires knowledge of SystemVerilog and UVM libraries. For the creation of register models, many commercial tools support a register model generation from register specification described in IP-XACT, but it is time-consuming to describe register specification in IP-XACT format. For easy creation of register model, we propose spreadsheet-based register template which is translated to IP-XACT description, from which register models can be easily generated using commercial tools. On the other hand, we also automate all the steps involved integrating test-bench and generating test-cases, so that designers may use register model without detailed knowledge of UVM or SystemVerilog. This automation flow involves generating and connecting test-bench components (e.g., driver, checker, bus adaptor, etc.) and writing test sequence for each type of register test-case. With the proposed flow, designers can save considerable amount of time to verify functionality of registers.

Evaluation of training nurses to perform semi-automated three-dimensional left ventricular ejection fraction using a customised workstation-based training protocol.

Science.gov (United States)

Guppy-Coles, Kristyan B; Prasad, Sandhir B; Smith, Kym C; Hillier, Samuel; Lo, Ada; Atherton, John J

2015-06-01

We aimed to determine the feasibility of training cardiac nurses to evaluate left ventricular function utilising a semi-automated, workstation-based protocol on three dimensional echocardiography images. Assessment of left ventricular function by nurses is an attractive concept. Recent developments in three dimensional echocardiography coupled with border detection assistance have reduced inter- and intra-observer variability and analysis time. This could allow abbreviated training of nurses to assess cardiac function. A comparative, diagnostic accuracy study evaluating left ventricular ejection fraction assessment utilising a semi-automated, workstation-based protocol performed by echocardiography-naïve nurses on previously acquired three dimensional echocardiography images. Nine cardiac nurses underwent two brief lectures about cardiac anatomy, physiology and three dimensional left ventricular ejection fraction assessment, before a hands-on demonstration in 20 cases. We then selected 50 cases from our three dimensional echocardiography library based on optimal image quality with a broad range of left ventricular ejection fractions, which was quantified by two experienced sonographers and the average used as the comparator for the nurses. Nurses independently measured three dimensional left ventricular ejection fraction using the Auto lvq package with semi-automated border detection. The left ventricular ejection fraction range was 25-72% (70% with a left ventricular ejection fraction nurses showed excellent agreement with the sonographers. Minimal intra-observer variability was noted on both short-term (same day) and long-term (>2 weeks later) retest. It is feasible to train nurses to measure left ventricular ejection fraction utilising a semi-automated, workstation-based protocol on previously acquired three dimensional echocardiography images. Further study is needed to determine the feasibility of training nurses to acquire three dimensional echocardiography

One-dimensional acoustic standing waves in rectangular channels for flow cytometry.

Science.gov (United States)

Austin Suthanthiraraj, Pearlson P; Piyasena, Menake E; Woods, Travis A; Naivar, Mark A; Lόpez, Gabriel P; Graves, Steven W

2012-07-01

Flow cytometry has become a powerful analytical tool for applications ranging from blood diagnostics to high throughput screening of molecular assemblies on microsphere arrays. However, instrument size, expense, throughput, and consumable use limit its use in resource poor areas of the world, as a component in environmental monitoring, and for detection of very rare cell populations. For these reasons, new technologies to improve the size and cost-to-performance ratio of flow cytometry are required. One such technology is the use of acoustic standing waves that efficiently concentrate cells and particles to the center of flow channels for analysis. The simplest form of this method uses one-dimensional acoustic standing waves to focus particles in rectangular channels. We have developed one-dimensional acoustic focusing flow channels that can be fabricated in simple capillary devices or easily microfabricated using photolithography and deep reactive ion etching. Image and video analysis demonstrates that these channels precisely focus single flowing streams of particles and cells for traditional flow cytometry analysis. Additionally, use of standing waves with increasing harmonics and in parallel microfabricated channels is shown to effectively create many parallel focused streams. Furthermore, we present the fabrication of an inexpensive optical platform for flow cytometry in rectangular channels and use of the system to provide precise analysis. The simplicity and low-cost of the acoustic focusing devices developed here promise to be effective for flow cytometers that have reduced size, cost, and consumable use. Finally, the straightforward path to parallel flow streams using one-dimensional multinode acoustic focusing, indicates that simple acoustic focusing in rectangular channels may also have a prominent role in high-throughput flow cytometry. Copyright © 2012 Elsevier Inc. All rights reserved.

Three-dimensional reconstruction of highly complex microscopic samples using scanning electron microscopy and optical flow estimation.

Directory of Open Access Journals (Sweden)

Ahmadreza Baghaie

Full Text Available Scanning Electron Microscope (SEM as one of the major research and industrial equipment for imaging of micro-scale samples and surfaces has gained extensive attention from its emerge. However, the acquired micrographs still remain two-dimensional (2D. In the current work a novel and highly accurate approach is proposed to recover the hidden third-dimension by use of multi-view image acquisition of the microscopic samples combined with pre/post-processing steps including sparse feature-based stereo rectification, nonlocal-based optical flow estimation for dense matching and finally depth estimation. Employing the proposed approach, three-dimensional (3D reconstructions of highly complex microscopic samples were achieved to facilitate the interpretation of topology and geometry of surface/shape attributes of the samples. As a byproduct of the proposed approach, high-definition 3D printed models of the samples can be generated as a tangible means of physical understanding. Extensive comparisons with the state-of-the-art reveal the strength and superiority of the proposed method in uncovering the details of the highly complex microscopic samples.

Three-dimensional investigation of the two-phase flow structure in a bubbly pipe flow

International Nuclear Information System (INIS)

Schmidl, W.; Hassan, Y.A.; Ortiz-Villafuerte, J.

1996-01-01

Particle image velocimetry (PIV) is a nonintrusive measurement technique that can be used to study the structure of various fluid flows. PIV is used to measure the time-varying, full-field velocity data of a particle-seeded flow field within either a two-dimensional plane or three-dimensional volume. PIV is a very efficient measurement technique since it can obtain both qualitative and quantitative spatial information about the flow field being studied. The quantitative spatial velocity information can be further processed into information of flow parameters such as vorticity and turbulence over extended areas. The objective of this study was to apply recent advances and improvements in the PIV flow measurement technique to the full-field, nonintrusive analysis of a three-dimensional, two-phase fluid flow system in such a manner that both components of the two-phase system could be experimentally quantified

Three-Dimensional Flow Field Measurements in a Transonic Turbine Cascade

Science.gov (United States)

Giel, P. W.; Thurman, D. R.; Lopez, I.; Boyle, R. J.; VanFossen, G. J.; Jett, T. A.; Camperchioli, W. P.; La, H.

1996-01-01

Three-dimensional flow field measurements are presented for a large scale transonic turbine blade cascade. Flow field total pressures and pitch and yaw flow angles were measured at an inlet Reynolds number of 1.0 x 10(exp 6) and at an isentropic exit Mach number of 1.3 in a low turbulence environment. Flow field data was obtained on five pitchwise/spanwise measurement planes, two upstream and three downstream of the cascade, each covering three blade pitches. Three-hole boundary layer probes and five-hole pitch/yaw probes were used to obtain data at over 1200 locations in each of the measurement planes. Blade and endwall static pressures were also measured at an inlet Reynolds number of 0.5 x 10(exp 6) and at an isentropic exit Mach number of 1.0. Tests were conducted in a linear cascade at the NASA Lewis Transonic Turbine Blade Cascade Facility. The test article was a turbine rotor with 136 deg of turning and an axial chord of 12.7 cm. The flow field in the cascade is highly three-dimensional as a result of thick boundary layers at the test section inlet and because of the high degree of flow turning. The large scale allowed for very detailed measurements of both flow field and surface phenomena. The intent of the work is to provide benchmark quality data for CFD code and model verification.

Topology of Flow Separation on Three-Dimensional Bodies

Science.gov (United States)

Chapman, Gary T.; Yates, Leslie A.

1991-01-01

In recent years there has been extensive research on three-dimensional flow separation. There are two different approaches: the phenomenological approach and a mathematical approach using topology. These two approaches are reviewed briefly and the shortcomings of some of the past works are discussed. A comprehensive approach applicable to incompressible and compressible steady-state flows as well as incompressible unsteady flow is then presented. The approach is similar to earlier topological approaches to separation but is more complete and in some cases adds more emphasis to certain points than in the past. To assist in the classification of various types of flow, nomenclature is introduced to describe the skin-friction portraits on the surface. This method of classification is then demonstrated on several categories of flow to illustrate particular points as well as the diversity of flow separation. The categories include attached, two-dimensional separation and three different types of simple, three-dimensional primary separation, secondary separation, and compound separation. Hypothetical experiments are utilized to illustrate the topological terminology and its role in characterizing these flows. These hypothetical experiments use colored oil injected onto the surface at singular points in the skin-friction portrait. Actual flow-visualization information, if available, is used to corroborate the hypothetical examples.

Automated Processing of Two-Dimensional Correlation Spectra

Science.gov (United States)

Sengstschmid; Sterk; Freeman

1998-04-01

An automated scheme is described which locates the centers of cross peaks in two-dimensional correlation spectra, even under conditions of severe overlap. Double-quantum-filtered correlation (DQ-COSY) spectra have been investigated, but the method is also applicable to TOCSY and NOESY spectra. The search criterion is the intrinsic symmetry (or antisymmetry) of cross-peak multiplets. An initial global search provides the preliminary information to build up a two-dimensional "chemical shift grid." All genuine cross peaks must be centered at intersections of this grid, a fact that reduces the extent of the subsequent search program enormously. The program recognizes cross peaks by examining the symmetry of signals in a test zone centered at a grid intersection. This "symmetry filter" employs a "lowest value algorithm" to discriminate against overlapping responses from adjacent multiplets. A progressive multiplet subtraction scheme provides further suppression of overlap effects. The processed two-dimensional correlation spectrum represents cross peaks as points at the chemical shift coordinates, with some indication of their relative intensities. Alternatively, the information is presented in the form of a correlation table. The authenticity of a given cross peak is judged by a set of "confidence criteria" expressed as numerical parameters. Experimental results are presented for the 400-MHz double-quantum-filtered COSY spectrum of 4-androsten-3,17-dione, a case where there is severe overlap. Copyright 1998 Academic Press.

A Fully Automated High-Throughput Zebrafish Behavioral Ototoxicity Assay.

Science.gov (United States)

Todd, Douglas W; Philip, Rohit C; Niihori, Maki; Ringle, Ryan A; Coyle, Kelsey R; Zehri, Sobia F; Zabala, Leanne; Mudery, Jordan A; Francis, Ross H; Rodriguez, Jeffrey J; Jacob, Abraham

2017-08-01

Zebrafish animal models lend themselves to behavioral assays that can facilitate rapid screening of ototoxic, otoprotective, and otoregenerative drugs. Structurally similar to human inner ear hair cells, the mechanosensory hair cells on their lateral line allow the zebrafish to sense water flow and orient head-to-current in a behavior called rheotaxis. This rheotaxis behavior deteriorates in a dose-dependent manner with increased exposure to the ototoxin cisplatin, thereby establishing itself as an excellent biomarker for anatomic damage to lateral line hair cells. Building on work by our group and others, we have built a new, fully automated high-throughput behavioral assay system that uses automated image analysis techniques to quantify rheotaxis behavior. This novel system consists of a custom-designed swimming apparatus and imaging system consisting of network-controlled Raspberry Pi microcomputers capturing infrared video. Automated analysis techniques detect individual zebrafish, compute their orientation, and quantify the rheotaxis behavior of a zebrafish test population, producing a powerful, high-throughput behavioral assay. Using our fully automated biological assay to test a standardized ototoxic dose of cisplatin against varying doses of compounds that protect or regenerate hair cells may facilitate rapid translation of candidate drugs into preclinical mammalian models of hearing loss.

Three-dimensional flow about penguin wings

Science.gov (United States)

Noca, Flavio; Sudki, Bassem; Lauria, Michel

2012-11-01

Penguins, contrary to airborne birds, do not need to compensate for gravity. Yet, the kinematics of their wings is highly three-dimensional and seems exceedingly complex for plain swimming. Is such kinematics the result of an evolutionary optimization or is it just a forced adaptation of an airborne flying apparatus to underwater swimming? Some answers will be provided based on flow dynamics around robotic penguin wings. Updates will also be presented on the development of a novel robotic arm intended to simulate penguin swimming and enable novel propulsion devices.

Three-dimensional measurement and visualization of internal flow of a moving droplet using confocal micro-PIV.

Science.gov (United States)

Kinoshita, Haruyuki; Kaneda, Shohei; Fujii, Teruo; Oshima, Marie

2007-03-01

This paper presents a micro-flow diagnostic technique, 'high-speed confocal micro-particle image velocimetry (PIV)', and its application to the internal flow measurement of a droplet passing through a microchannel. A confocal micro-PIV system has been successfully constructed wherein a high-speed confocal scanner is combined with the conventional micro-PIV technique. The confocal micro-PIV system enables us to obtain a sequence of sharp and high-contrast cross-sectional particle images at 2000 frames s(-1). This study investigates the confocal depth, which is a significant parameter to determine the out-of-plane measurement resolution in confocal micro-PIV. Using the present confocal micro-PIV system, we can measure velocity distributions of micro-flows in a 228 microm x 171 microm region with a confocal depth of 1.88 microm. We also propose a three-dimensional velocity measurement method based on the confocal micro-PIV and the equation of continuity. This method enables us to measure three velocity components in a three-dimensional domain of micro flows. The confocal micro-PIV system is applied to the internal flow measurement of a droplet. We have measured three-dimensional distributions of three-component velocities of a droplet traveling in a 100 microm (width) x 58 microm (depth) channel. A volumetric velocity distribution inside a droplet is obtained by the confocal micro-PIV and the three-dimensional flow structure inside the droplet is investigated. The measurement results suggest that a three-dimensional and complex circulating flow is formed inside the droplet.

A new method for automated high-dimensional lesion segmentation evaluated in vascular injury and applied to the human occipital lobe.

Science.gov (United States)

Mah, Yee-Haur; Jager, Rolf; Kennard, Christopher; Husain, Masud; Nachev, Parashkev

2014-07-01

Making robust inferences about the functional neuroanatomy of the brain is critically dependent on experimental techniques that examine the consequences of focal loss of brain function. Unfortunately, the use of the most comprehensive such technique-lesion-function mapping-is complicated by the need for time-consuming and subjective manual delineation of the lesions, greatly limiting the practicability of the approach. Here we exploit a recently-described general measure of statistical anomaly, zeta, to devise a fully-automated, high-dimensional algorithm for identifying the parameters of lesions within a brain image given a reference set of normal brain images. We proceed to evaluate such an algorithm in the context of diffusion-weighted imaging of the commonest type of lesion used in neuroanatomical research: ischaemic damage. Summary performance metrics exceed those previously published for diffusion-weighted imaging and approach the current gold standard-manual segmentation-sufficiently closely for fully-automated lesion-mapping studies to become a possibility. We apply the new method to 435 unselected images of patients with ischaemic stroke to derive a probabilistic map of the pattern of damage in lesions involving the occipital lobe, demonstrating the variation of anatomical resolvability of occipital areas so as to guide future lesion-function studies of the region. Copyright © 2012 Elsevier Ltd. All rights reserved.

High definition graphics application in fluid flow simulations

International Nuclear Information System (INIS)

Bancroft, G.; Merritt, F.; Buning, P.; Watson, V.

1987-01-01

NASA Ames is using high spatial/color-resolution computer graphics to interactively visualize flow fields generated by supercomputer solutions for the flow about such vehicles as the Space Shuttle. The scientist's viewing position in three-dimensional space can be interactively changed while the fluid flow is either frozen or moving in time. Animated sequences can then be made for workstation viewing with the aid of specialized software that allows easy editing and automatic tweening of the sequences. Attention is presently given to the software generating the three-dimensional flow field displays, as well as that for creating the animation sequences

Assessment of wall friction model in multi-dimensional component of MARS with air–water cross flow experiment

Energy Technology Data Exchange (ETDEWEB)

Yang, Jin-Hwa [Nuclear Thermal-Hydraulic Engineering Laboratory, Seoul National University, Gwanak 599, Gwanak-ro, Gwanak-gu, Seoul 151-742 (Korea, Republic of); Korea Atomic Energy Research Institute, 989-111, Daedeok-daero, Yuseong-gu, Daejeon 305-600 (Korea, Republic of); Choi, Chi-Jin [Nuclear Thermal-Hydraulic Engineering Laboratory, Seoul National University, Gwanak 599, Gwanak-ro, Gwanak-gu, Seoul 151-742 (Korea, Republic of); Cho, Hyoung-Kyu, E-mail: chohk@snu.ac.kr [Nuclear Thermal-Hydraulic Engineering Laboratory, Seoul National University, Gwanak 599, Gwanak-ro, Gwanak-gu, Seoul 151-742 (Korea, Republic of); Euh, Dong-Jin [Korea Atomic Energy Research Institute, 989-111, Daedeok-daero, Yuseong-gu, Daejeon 305-600 (Korea, Republic of); Park, Goon-Cherl [Nuclear Thermal-Hydraulic Engineering Laboratory, Seoul National University, Gwanak 599, Gwanak-ro, Gwanak-gu, Seoul 151-742 (Korea, Republic of)

2017-02-15

Recently, high precision and high accuracy analysis on multi-dimensional thermal hydraulic phenomena in a nuclear power plant has been considered as state-of-the-art issues. System analysis code, MARS, also adopted a multi-dimensional module to simulate them more accurately. Even though it was applied to represent the multi-dimensional phenomena, but implemented models and correlations in that are one-dimensional empirical ones based on one-dimensional pipe experimental results. Prior to the application of the multi-dimensional simulation tools, however, the constitutive models for a two-phase flow need to be carefully validated, such as the wall friction model. Especially, in a Direct Vessel Injection (DVI) system, the injected emergency core coolant (ECC) on the upper part of the downcomer interacts with the lateral steam flow during the reflood phase in the Large-Break Loss-Of-Coolant-Accident (LBLOCA). The interaction between the falling film and lateral steam flow induces a multi-dimensional two-phase flow. The prediction of ECC flow behavior plays a key role in determining the amount of coolant that can be used as core cooling. Therefore, the wall friction model which is implemented to simulate the multi-dimensional phenomena should be assessed by multidimensional experimental results. In this paper, the air–water cross film flow experiments simulating the multi-dimensional phenomenon in upper part of downcomer as a conceptual problem will be introduced. The two-dimensional local liquid film velocity and thickness data were used as benchmark data for code assessment. And then the previous wall friction model of the MARS-MultiD in the annular flow regime was modified. As a result, the modified MARS-MultiD produced improved calculation result than previous one.

Assessment of RELAP5-3D copyright using data from two-dimensional RPI flow tests

International Nuclear Information System (INIS)

Davis, C.B.

1998-01-01

The capability of the RELAP5-3D copyright computer code to perform multi-dimensional thermal-hydraulic analysis was assessed using data from steady-state flow tests conducted at Rensselaer Polytechnic Institute (RPI). The RPI data were taken in a two-dimensional test section in a low-pressure air/water loop. The test section consisted of a thin vertical channel that simulated a two-dimensional slice through the core of a pressurized water reactor. Single-phase and two-phase flows were supplied to the test section in an asymmetric manner to generate a two-dimensional flow field. A traversing gamma densitometer was used to measure void fraction at many locations in the test section. High speed photographs provided information on the flow patterns and flow regimes. The RPI test section was modeled using the multi-dimensional component in RELAP5-3D Version BF06. Calculations of three RPI experiments were performed. The flow regimes predicted by the base code were in poor agreement with those observed in the tests. The two-phase regions were observed to be in the bubbly and slug flow regimes in the test. However, nearly all of the junctions in the horizontal direction were calculated to be in the stratified flow regime because of the relatively low velocities in that direction. As a result, the void fraction predictions were also in poor agreement with the measured values. Significantly improved results were obtained in sensitivity calculations with a modified version of the code that prevented the horizontal junctions from entering the stratified flow regime. These results indicate that the code's logic in the determination of flow regimes in a multi-dimensional component must be improved. The results of the sensitivity calculations also indicate that RELAP5-3D will provide a significant multi-dimensional hydraulic analysis capability once the flow regime prediction is improved

Engineering Mathematical Analysis Method for Productivity Rate in Linear Arrangement Serial Structure Automated Flow Assembly Line

Directory of Open Access Journals (Sweden)

Tan Chan Sin

2015-01-01

Full Text Available Productivity rate (Q or production rate is one of the important indicator criteria for industrial engineer to improve the system and finish good output in production or assembly line. Mathematical and statistical analysis method is required to be applied for productivity rate in industry visual overviews of the failure factors and further improvement within the production line especially for automated flow line since it is complicated. Mathematical model of productivity rate in linear arrangement serial structure automated flow line with different failure rate and bottleneck machining time parameters becomes the basic model for this productivity analysis. This paper presents the engineering mathematical analysis method which is applied in an automotive company which possesses automated flow assembly line in final assembly line to produce motorcycle in Malaysia. DCAS engineering and mathematical analysis method that consists of four stages known as data collection, calculation and comparison, analysis, and sustainable improvement is used to analyze productivity in automated flow assembly line based on particular mathematical model. Variety of failure rate that causes loss of productivity and bottleneck machining time is shown specifically in mathematic figure and presents the sustainable solution for productivity improvement for this final assembly automated flow line.

Rheology of dense granular flows in two dimensions: Comparison of fully two-dimensional flows to unidirectional shear flow

Science.gov (United States)

Bhateja, Ashish; Khakhar, Devang V.

2018-06-01

We consider the rheology of steady two-dimensional granular flows, in different geometries, using discrete element method-based simulations of soft spheres. The flow classification parameter (ψ ), which defines the local flow type (ranging from pure rotation to simple shear to pure extension), varies spatially, to a significant extent, in the flows. We find that the material behaves as a generalized Newtonian fluid. The μ -I scaling proposed by Jop et al. [Nature (London) 441, 727 (2006), 10.1038/nature04801] is found to be valid in both two-dimensional and unidirectional flows, as observed in previous studies; however, the data for each flow geometry fall on a different curve. The results for the two-dimensional silo flow indicate that the viscosity does not depend directly on the flow type parameter, ψ . We find that the scaling based on "granular fluidity" [Zhang and Kamrin, Phys. Rev. Lett. 118, 058001 (2017), 10.1103/PhysRevLett.118.058001] gives good collapse of the data to a single curve for all the geometries. The data for the variation of the solid faction with inertial number show a reasonable collapse for the different geometries.

Development of automated endoscopes for dimensional micro-measurements

Science.gov (United States)

Hrebabetzky, Frank

2013-04-01

Increasing demands for product quality and outsourcing of production in the automobile industry lead to in­ creasingly tight tolerances for the components. In the area of metal-mechanics these are largely dimensional and require frequently uncertainties in the micron region. For optical instruments this means microscopical resolu­ tion. Dimensional measurement with uncertainties of some microns is nothing new, state of the art equipment in fact goes far below. The task becomes difficult if the measurements have to be carried out in an industrial production environment - and deep inside a bore hole. This paper describes the development of an automatic measurement system for internal dimensions of brake master cylinders, specifically the development of endoscopes, illuminations for edge detection, and integration with other sensors, actuators and controllers. The most demanding part was the endoscope development, because, surprisingly, no commercial product for microscopic view and precision measurements was found on the market. As the market for such measurement machines is very small, and as the requirements were different for each endoscope, the budget allowed only the development of prototypes, using readily available optical components. Borders between faces with different orientation of metallic structures can be difficult do detect. A satisfactory metrological performance can be achieved only with carefully shaped illumination, even if the source is a simple LED (light emitting diode). The automation was responsible for the largest part of the overall cost, coming from the desire for a high throughput of the measurement machine, even when operated by not highly qualified personnel. With the safety requirements satisfied, such a device ends up as a pretty complex equipment. Nevertheless, these aspects will be mentioned only for completeness, because standard components and methods were applied.

Effect of TIPS placement on portal and splanchnic arterial blood flow in 4-dimensional flow MRI

Energy Technology Data Exchange (ETDEWEB)

Stankovic, Zoran [Northwestern University, Department of Radiology, Feinberg School of Medicine, Chicago, IL (United States); University Medical Center Freiburg, Department of Diagnostic Radiology and Medical Physics, Freiburg (Germany); Roessle, Martin; Schultheiss, Michael [University Medical Center Freiburg, Department of Gastroenterology, Freiburg (Germany); Euringer, Wulf; Langer, Mathias [University Medical Center Freiburg, Department of Diagnostic Radiology and Medical Physics, Freiburg (Germany); Salem, Riad; Barker, Alex; Carr, James; Collins, Jeremy D. [Northwestern University, Department of Radiology, Feinberg School of Medicine, Chicago, IL (United States); Markl, Michael [Northwestern University, Department of Radiology, Feinberg School of Medicine, Chicago, IL (United States); Northwestern University, Department of Biomedical Engineering, McCormick School of Engineering, Chicago, IL (United States)

2015-09-15

To assess changes in portal and splanchnic arterial haemodynamics in patients undergoing transjugular intrahepatic portosystemic shunt (TIPS) using four-dimensional (4D) flow MRI, a non-invasive, non-contrast imaging technique. Eleven patients undergoing TIPS implantation were enrolled. K-t GRAPPA accelerated non-contrast 4D flow MRI of the liver vasculature was applied with acceleration factor R = 5 at 3Tesla. Flow analysis included three-dimensional (3D) blood flow visualization using time-resolved 3D particle traces and semi-quantitative flow pattern grading. Quantitative evaluation entailed peak velocities and net flows throughout the arterial and portal venous (PV) systems. MRI measurements were taken within 24 h before and 4 weeks after TIPS placement. Three-dimensional flow visualization with 4D flow MRI revealed good image quality with minor limitations in PV flow. Quantitative analysis revealed a significant increase in PV flow (562 ± 373 ml/min before vs. 1831 ± 965 ml/min after TIPS), in the hepatic artery (176 ± 132 ml/min vs. 354 ± 140 ml/min) and combined flow in splenic and superior mesenteric arteries (770 ml/min vs. 1064 ml/min). Shunt-flow assessment demonstrated stenoses in two patients confirmed and treated at TIPS revision. Four-dimensional flow MRI might have the potential to give new information about the effect of TIPS placement on hepatic perfusion. It may explain some unexpected findings in clinical observation studies. (orig.)

Automated Analysis and Classification of Histological Tissue Features by Multi-Dimensional Microscopic Molecular Profiling.

Directory of Open Access Journals (Sweden)

Daniel P Riordan

Full Text Available Characterization of the molecular attributes and spatial arrangements of cells and features within complex human tissues provides a critical basis for understanding processes involved in development and disease. Moreover, the ability to automate steps in the analysis and interpretation of histological images that currently require manual inspection by pathologists could revolutionize medical diagnostics. Toward this end, we developed a new imaging approach called multidimensional microscopic molecular profiling (MMMP that can measure several independent molecular properties in situ at subcellular resolution for the same tissue specimen. MMMP involves repeated cycles of antibody or histochemical staining, imaging, and signal removal, which ultimately can generate information analogous to a multidimensional flow cytometry analysis on intact tissue sections. We performed a MMMP analysis on a tissue microarray containing a diverse set of 102 human tissues using a panel of 15 informative antibody and 5 histochemical stains plus DAPI. Large-scale unsupervised analysis of MMMP data, and visualization of the resulting classifications, identified molecular profiles that were associated with functional tissue features. We then directly annotated H&E images from this MMMP series such that canonical histological features of interest (e.g. blood vessels, epithelium, red blood cells were individually labeled. By integrating image annotation data, we identified molecular signatures that were associated with specific histological annotations and we developed statistical models for automatically classifying these features. The classification accuracy for automated histology labeling was objectively evaluated using a cross-validation strategy, and significant accuracy (with a median per-pixel rate of 77% per feature from 15 annotated samples for de novo feature prediction was obtained. These results suggest that high-dimensional profiling may advance the

Coherent structures and flow topology of transitional separated-reattached flow over two and three dimensional geometrical shapes

Science.gov (United States)

Diabil, Hayder Azeez; Li, Xin Kai; Abdalla, Ibrahim Elrayah

2017-09-01

Large-scale organized motions (commonly referred to coherent structures) and flow topology of a transitional separated-reattached flow have been visualised and investigated using flow visualisation techniques. Two geometrical shapes including two-dimensional flat plate with rectangular leading edge and three-dimensional square cylinder are chosen to shed a light on the flow topology and present coherent structures of the flow over these shapes. For both geometries and in the early stage of the transition, two-dimensional Kelvin-Helmholtz rolls are formed downstream of the leading edge. They are observed to be twisting around the square cylinder while they stay flat in the case of the two-dimensional flat plate. For both geometrical shapes, the two-dimensional Kelvin-Helmholtz rolls move downstream of the leading edge and they are subjected to distortion to form three-dimensional hairpin structures. The flow topology in the flat plate is different from that in the square cylinder. For the flat plate, there is a merging process by a pairing of the Kelvin-Helmholtz rolls to form a large structure that breaks down directly into many hairpin structures. For the squire cylinder case, the Kelvin-Helmholtz roll evolves topologically to form a hairpin structure. In the squire cylinder case, the reattachment length is much shorter and a forming of the three-dimensional structures is closer to the leading edge than that in the flat plate case.

Multi-dimensional two-phase flow measurements in a large-diameter pipe using wire-mesh sensor

International Nuclear Information System (INIS)

Kanai, Taizo; Furuya, Masahiro; Arai, Takahiro; Shirakawa, Kenetsu; Nishi, Yoshihisa; Ueda, Nobuyuki

2011-01-01

The authors developed a method of measurement to determine the multi-dimensionality of two phase flow. A wire-mesh sensor (WMS) can acquire a void fraction distribution at a high temporal and spatial resolution and also estimate the velocity of a vertical rising flow by investigating the signal time-delay of the upstream WMS relative to downstream. Previously, one-dimensional velocity was estimated by using the same point of each WMS at a temporal resolution of 1.0 - 5.0 s. The authors propose to extend this time series analysis to estimate the multi-dimensional velocity profile via cross-correlation analysis between a point of upstream WMS and multiple points downstream. Bubbles behave in various ways according to size, which is used to classify them into certain groups via wavelet analysis before cross-correlation analysis. This method was verified by air-water straight and swirl flows within a large-diameter vertical pipe. A high-speed camera is used to set the parameter of cross-correlation analysis. The results revealed that for the rising straight and swirl flows, large scale bubbles tend to move to the center, while the small bubble is pushed to the outside or sucked into the space where the large bubbles existed. Moreover, it is found that this method can estimate the rotational component of velocity of the swirl flow as well as measuring the multi-dimensional velocity vector at high temporal resolutions of 0.2 s. (author)

Automated, non-linear registration between 3-dimensional brain map and medical head image

International Nuclear Information System (INIS)

Mizuta, Shinobu; Urayama, Shin-ichi; Zoroofi, R.A.; Uyama, Chikao

1998-01-01

In this paper, we propose an automated, non-linear registration method between 3-dimensional medical head image and brain map in order to efficiently extract the regions of interest. In our method, input 3-dimensional image is registered into a reference image extracted from a brain map. The problems to be solved are automated, non-linear image matching procedure, and cost function which represents the similarity between two images. Non-linear matching is carried out by dividing the input image into connected partial regions, transforming the partial regions preserving connectivity among the adjacent images, evaluating the image similarity between the transformed regions of the input image and the correspondent regions of the reference image, and iteratively searching the optimal transformation of the partial regions. In order to measure the voxelwise similarity of multi-modal images, a cost function is introduced, which is based on the mutual information. Some experiments using MR images presented the effectiveness of the proposed method. (author)

Application of a method for comparing one-dimensional and two-dimensional models of a ground-water flow system

International Nuclear Information System (INIS)

Naymik, T.G.

1978-01-01

To evaluate the inability of a one-dimensional ground-water model to interact continuously with surrounding hydraulic head gradients, simulations using one-dimensional and two-dimensional ground-water flow models were compared. This approach used two types of models: flow-conserving one-and-two dimensional models, and one-dimensional and two-dimensional models designed to yield two-dimensional solutions. The hydraulic conductivities of controlling features were varied and model comparison was based on the travel times of marker particles. The solutions within each of the two model types compare reasonably well, but a three-dimensional solution is required to quantify the comparison

Automated Low-Cost Smartphone-Based Lateral Flow Saliva Test Reader for Drugs-of-Abuse Detection

Directory of Open Access Journals (Sweden)

Adrian Carrio

2015-11-01

Full Text Available Lateral flow assay tests are nowadays becoming powerful, low-cost diagnostic tools. Obtaining a result is usually subject to visual interpretation of colored areas on the test by a human operator, introducing subjectivity and the possibility of errors in the extraction of the results. While automated test readers providing a result-consistent solution are widely available, they usually lack portability. In this paper, we present a smartphone-based automated reader for drug-of-abuse lateral flow assay tests, consisting of an inexpensive light box and a smartphone device. Test images captured with the smartphone camera are processed in the device using computer vision and machine learning techniques to perform automatic extraction of the results. A deep validation of the system has been carried out showing the high accuracy of the system. The proposed approach, applicable to any line-based or color-based lateral flow test in the market, effectively reduces the manufacturing costs of the reader and makes it portable and massively available while providing accurate, reliable results.

Automated Low-Cost Smartphone-Based Lateral Flow Saliva Test Reader for Drugs-of-Abuse Detection.

Science.gov (United States)

Carrio, Adrian; Sampedro, Carlos; Sanchez-Lopez, Jose Luis; Pimienta, Miguel; Campoy, Pascual

2015-11-24

Lateral flow assay tests are nowadays becoming powerful, low-cost diagnostic tools. Obtaining a result is usually subject to visual interpretation of colored areas on the test by a human operator, introducing subjectivity and the possibility of errors in the extraction of the results. While automated test readers providing a result-consistent solution are widely available, they usually lack portability. In this paper, we present a smartphone-based automated reader for drug-of-abuse lateral flow assay tests, consisting of an inexpensive light box and a smartphone device. Test images captured with the smartphone camera are processed in the device using computer vision and machine learning techniques to perform automatic extraction of the results. A deep validation of the system has been carried out showing the high accuracy of the system. The proposed approach, applicable to any line-based or color-based lateral flow test in the market, effectively reduces the manufacturing costs of the reader and makes it portable and massively available while providing accurate, reliable results.

One-dimensional calculation of flow branching using the method of characteristics

International Nuclear Information System (INIS)

Meier, R.W.; Gido, R.G.

1978-05-01

In one-dimensional flow systems, the flow often branches, such as at a tee or manifold. The study develops a formulation for calculating the flow through branch points with one-dimensional method of characteristics equations. The resultant equations were verified by comparison with experimental measurements

OpenCyto: an open source infrastructure for scalable, robust, reproducible, and automated, end-to-end flow cytometry data analysis.

Directory of Open Access Journals (Sweden)

Greg Finak

2014-08-01

Full Text Available Flow cytometry is used increasingly in clinical research for cancer, immunology and vaccines. Technological advances in cytometry instrumentation are increasing the size and dimensionality of data sets, posing a challenge for traditional data management and analysis. Automated analysis methods, despite a general consensus of their importance to the future of the field, have been slow to gain widespread adoption. Here we present OpenCyto, a new BioConductor infrastructure and data analysis framework designed to lower the barrier of entry to automated flow data analysis algorithms by addressing key areas that we believe have held back wider adoption of automated approaches. OpenCyto supports end-to-end data analysis that is robust and reproducible while generating results that are easy to interpret. We have improved the existing, widely used core BioConductor flow cytometry infrastructure by allowing analysis to scale in a memory efficient manner to the large flow data sets that arise in clinical trials, and integrating domain-specific knowledge as part of the pipeline through the hierarchical relationships among cell populations. Pipelines are defined through a text-based csv file, limiting the need to write data-specific code, and are data agnostic to simplify repetitive analysis for core facilities. We demonstrate how to analyze two large cytometry data sets: an intracellular cytokine staining (ICS data set from a published HIV vaccine trial focused on detecting rare, antigen-specific T-cell populations, where we identify a new subset of CD8 T-cells with a vaccine-regimen specific response that could not be identified through manual analysis, and a CyTOF T-cell phenotyping data set where a large staining panel and many cell populations are a challenge for traditional analysis. The substantial improvements to the core BioConductor flow cytometry packages give OpenCyto the potential for wide adoption. It can rapidly leverage new developments in

Sub critical transition to turbulence in three-dimensional Kolmogorov flow

Energy Technology Data Exchange (ETDEWEB)

Veen, Lennaert van [University of Ontario Institute of Technology, 2000 Simcoe Street North, L1H 7K4 Oshawa, Ontario (Canada); Goto, Susumu, E-mail: lennaert.vanveen@uoit.ca [Graduate School of Engineering Science, Osaka University 1–3 Machikaneyama, Toyonaka, Osaka, 560-8531 Japan (Japan)

2016-12-15

We study Kolmogorov flow on a three dimensional, periodic domain with aspect ratios fixed to unity. Using an energy method, we give a concise proof of the linear stability of the laminar flow profile. Since turbulent motion is observed for high enough Reynolds numbers, we expect the domain of attraction of the laminar flow to be bounded by the stable manifolds of simple invariant solutions. We show one such edge state to be an equilibrium with a spatial structure reminiscent of that found in plane Couette flow, with streamwise rolls on the largest spatial scales. When tracking the edge state, we find two branches of solutions that join in a saddle node bifurcation at a finite Reynolds number. (paper)

A feasability study of color flow doppler vectorization for automated blood flow monitoring.

Science.gov (United States)

Schorer, R; Badoual, A; Bastide, B; Vandebrouck, A; Licker, M; Sage, D

2017-12-01

An ongoing issue in vascular medicine is the measure of the blood flow. Catheterization remains the gold standard measurement method, although non-invasive techniques are an area of intense research. We hereby present a computational method for real-time measurement of the blood flow from color flow Doppler data, with a focus on simplicity and monitoring instead of diagnostics. We then analyze the performance of a proof-of-principle software implementation. We imagined a geometrical model geared towards blood flow computation from a color flow Doppler signal, and we developed a software implementation requiring only a standard diagnostic ultrasound device. Detection performance was evaluated by computing flow and its determinants (flow speed, vessel area, and ultrasound beam angle of incidence) on purposely designed synthetic and phantom-based arterial flow simulations. Flow was appropriately detected in all cases. Errors on synthetic images ranged from nonexistent to substantial depending on experimental conditions. Mean errors on measurements from our phantom flow simulation ranged from 1.2 to 40.2% for angle estimation, and from 3.2 to 25.3% for real-time flow estimation. This study is a proof of concept showing that accurate measurement can be done from automated color flow Doppler signal extraction, providing the industry the opportunity for further optimization using raw ultrasound data.

Dynamics of lava flow - Thickness growth characteristics of steady two-dimensional flow

Science.gov (United States)

Park, S.; Iversen, J. D.

1984-01-01

The thickness growth characteristics of flowing lava are investigated using a heat balance model and a two-dimensional model for flow of a Bingham plastic fluid down an inclined plane. It is found that yield strength plays a crucial role in the thickening of a lava flow of given flow rate. To illustrate this point, downstream thickness profiles and yield strength distributions were calculated for flows with mass flow rates of 10,000 and 100,000 kg/m-sec. Higher flow rates led to slow cooling rates which resulted in slow rate of increase of yield strength and thus greater flow lengths.

Transient two-dimensional flow in porous media

International Nuclear Information System (INIS)

Sharpe, L. Jr.

1979-01-01

The transient flow of an isothermal ideal gas from the cavity formed by an underground nuclear explosion is investigated. A two-dimensional finite element method is used in analyzing the gas flow. Numerical results of the pressure distribution are obtained for both the stemming column and the surrounding porous media

A New Automated Method and Sample Data Flow for Analysis of Volatile Nitrosamines in Human Urine*

Science.gov (United States)

Hodgson, James A.; Seyler, Tiffany H.; McGahee, Ernest; Arnstein, Stephen; Wang, Lanqing

2016-01-01

Volatile nitrosamines (VNAs) are a group of compounds classified as probable (group 2A) and possible (group 2B) carcinogens in humans. Along with certain foods and contaminated drinking water, VNAs are detected at high levels in tobacco products and in both mainstream and sidestream smoke. Our laboratory monitors six urinary VNAs—N-nitrosodimethylamine (NDMA), N-nitrosomethylethylamine (NMEA), N-nitrosodiethylamine (NDEA), N-nitrosopiperidine (NPIP), N-nitrosopyrrolidine (NPYR), and N-nitrosomorpholine (NMOR)—using isotope dilution GC-MS/MS (QQQ) for large population studies such as the National Health and Nutrition Examination Survey (NHANES). In this paper, we report for the first time a new automated sample preparation method to more efficiently quantitate these VNAs. Automation is done using Hamilton STAR™ and Caliper Staccato™ workstations. This new automated method reduces sample preparation time from 4 hours to 2.5 hours while maintaining precision (inter-run CV < 10%) and accuracy (85% - 111%). More importantly this method increases sample throughput while maintaining a low limit of detection (<10 pg/mL) for all analytes. A streamlined sample data flow was created in parallel to the automated method, in which samples can be tracked from receiving to final LIMs output with minimal human intervention, further minimizing human error in the sample preparation process. This new automated method and the sample data flow are currently applied in bio-monitoring of VNAs in the US non-institutionalized population NHANES 2013-2014 cycle. PMID:26949569

Self-organization in three-dimensional compressible magnetohydrodynamic flow

International Nuclear Information System (INIS)

Horiuchi, Ritoku; Sato, Tetsuya.

1987-07-01

A three-dimensional self-organization process of a compressible dissipative plasma with a velocity-magnetic field correlation is investigated in detail by means of a variational method and a magnetohydrodynamic simulation. There are two types of relaxation, i.e., fast relaxation in which the cross helicity is not conserved, and slow relaxation in which the cross helicity is approximately conserved. In the slow relaxation case the cross helicity consists of two components with opposite sign which have almost the same amplitude in the large wavenumber region. In both cases the system approaches a high correlation state, dependent on the initial condition. These results are consistent with an observational data of the solar wind. Selective dissipation of magnetic energy, normal cascade of magnetic energy spectrum and inverse cascade of magnetic helicity spectrum are observed for the sub-Alfvenic flow case as was previously observed for the zero flow case. When the flow velocity is super-Alfvenic, the relaxation process is significantly altered from the zero flow case. (author)

Utilizing High-Performance Computing to Investigate Parameter Sensitivity of an Inversion Model for Vadose Zone Flow and Transport

Science.gov (United States)

Fang, Z.; Ward, A. L.; Fang, Y.; Yabusaki, S.

2011-12-01

High-resolution geologic models have proven effective in improving the accuracy of subsurface flow and transport predictions. However, many of the parameters in subsurface flow and transport models cannot be determined directly at the scale of interest and must be estimated through inverse modeling. A major challenge, particularly in vadose zone flow and transport, is the inversion of the highly-nonlinear, high-dimensional problem as current methods are not readily scalable for large-scale, multi-process models. In this paper we describe the implementation of a fully automated approach for addressing complex parameter optimization and sensitivity issues on massively parallel multi- and many-core systems. The approach is based on the integration of PNNL's extreme scale Subsurface Transport Over Multiple Phases (eSTOMP) simulator, which uses the Global Array toolkit, with the Beowulf-Cluster inspired parallel nonlinear parameter estimation software, BeoPEST in the MPI mode. In the eSTOMP/BeoPEST implementation, a pre-processor generates all of the PEST input files based on the eSTOMP input file. Simulation results for comparison with observations are extracted automatically at each time step eliminating the need for post-process data extractions. The inversion framework was tested with three different experimental data sets: one-dimensional water flow at Hanford Grass Site; irrigation and infiltration experiment at the Andelfingen Site; and a three-dimensional injection experiment at Hanford's Sisson and Lu Site. Good agreements are achieved in all three applications between observations and simulations in both parameter estimates and water dynamics reproduction. Results show that eSTOMP/BeoPEST approach is highly scalable and can be run efficiently with hundreds or thousands of processors. BeoPEST is fault tolerant and new nodes can be dynamically added and removed. A major advantage of this approach is the ability to use high-resolution geologic models to preserve

Automated aberration correction of arbitrary laser modes in high numerical aperture systems

OpenAIRE

Hering, Julian; Waller, Erik H.; Freymann, Georg von

2016-01-01

Controlling the point-spread-function in three-dimensional laser lithography is crucial for fabricating structures with highest definition and resolution. In contrast to microscopy, aberrations have to be physically corrected prior to writing, to create well defined doughnut modes, bottlebeams or multi foci modes. We report on a modified Gerchberg-Saxton algorithm for spatial-light-modulator based automated aberration compensation to optimize arbitrary laser-modes in a high numerical aperture...

Three dimensional flow phenomena in fluid machinery; Proceedings of the winter annual meeting, Miami Beach, FL, November 17-22, 1985

International Nuclear Information System (INIS)

Hamed, A.; Herring, J.; Povinelli, L.

1985-01-01

Papers in this volume provide an overview of the latest developments in experimental measurements and analytical and numerical predictions of three-dimensional flows in fluid machinery. Topics discussed include three-dimensional cascade testing of turbine nozzles at high exit Mach number; the use of a secondary flow computation in the compressor design process; an experimental investigation of static propeller flow field; and calculation of three-dimensional boundary layers on rotating turbine blades. Papers are also presented on a three-dimensional solution method for turbomachinery analysis; analysis of rotational inviscid flows in curved passages; and a mathematical model for the analysis of fluid flow in a scroll

Three Dimensional Viscous Flow Field in an Axial Flow Turbine Nozzle Passage

Science.gov (United States)

Ristic, D.; Lakshminarayana, B.

1997-01-01

The objective of this investigation is experimental and computational study of three dimensional viscous flow field in the nozzle passage of an axial flow turbine stage. The nozzle passage flow field has been measured using a two sensor hot-wire probe at various axial and radial stations. In addition, two component LDV measurements at one axial station (x/c(sum m) = 0.56) were performed to measure the velocity field. Static pressure measurements and flow visualization, using a fluorescent oil technique, were also performed to obtain the location of transition and the endwall limiting streamlines. A three dimensional boundary layer code, with a simple intermittency transition model, was used to predict the viscous layers along the blade and endwall surfaces. The boundary layers on the blade surface were found to be very thin and mostly laminar, except on the suction surface downstream of 70% axial chord. Strong radial pressure gradient, especially close to the suction surface, induces strong cross flow components in the trailing edge regions of the blade. On the end-walls the boundary layers were much thicker, especially near the suction corner of the casing surface, caused by secondary flow. The secondary flow region near the suction-casing surface corner indicates the presence of the passage vortex detached from the blade surface. The corner vortex is found to be very weak. The presence of a closely spaced rotor downstream (20% of the nozzle vane chord) introduces unsteadiness in the blade passage. The measured instantaneous velocity signal was filtered using FFT square window to remove the periodic unsteadiness introduced by the downstream rotor and fans. The filtering decreased the free stream turbulence level from 2.1% to 0.9% but had no influence on the computed turbulence length scale. The computation of the three dimensional boundary layers is found to be accurate on the nozzle passage blade surfaces, away from the end-walls and the secondary flow region. On

A coupled three dimensional model of vanadium redox flow battery for flow field designs

International Nuclear Information System (INIS)

Yin, Cong; Gao, Yan; Guo, Shaoyun; Tang, Hao

2014-01-01

A 3D (three-dimensional) model of VRB (vanadium redox flow battery) with interdigitated flow channel design is proposed. Two different stack inlet designs, single-inlet and multi-inlet, are structured in the model to study the distributions of fluid pressure, electric potential, current density and overpotential during operation of VRB cell. Electrolyte flow rate and stack channel dimension are proved to be the critical factors affecting flow distribution and cell performance. The model developed in this paper can be employed to optimize both VRB stack design and system operation conditions. Further improvements of the model concerning current density and electrode properties are also suggested in the paper. - Highlights: • A coupled three-dimensional model of vanadium redox flow cell is proposed. • Interdigitated flow channels with two different manifold designs are simulated. • Manifold structure affects uniformity of distribution patterns significantly. • Increased electrolyte flow rate improves cell performance for both designs. • Decreased channel size and enlarged land width enhance cell voltage

Human Factors of Automated Driving : Predicting the Effects of Authority Transitions on Traffic Flow Efficiency

NARCIS (Netherlands)

Varotto, S.F.; Hoogendoorn, R.G.; Van Arem, B.; Hoogendoorn, S.P.

2014-01-01

Automated driving potentially has a significant impact on traffic flow efficiency. Automated vehicles, which possess cooperative capabilities, are expected to reduce congestion levels for instance by increasing road capacity, by anticipating traffic conditions further downstream and also by

Rapid access to compound libraries through flow technology: fully automated synthesis of a 3-aminoindolizine library via orthogonal diversification.

Science.gov (United States)

Lange, Paul P; James, Keith

2012-10-08

A novel methodology for the synthesis of druglike heterocycle libraries has been developed through the use of flow reactor technology. The strategy employs orthogonal modification of a heterocyclic core, which is generated in situ, and was used to construct both a 25-membered library of druglike 3-aminoindolizines, and selected examples of a 100-member virtual library. This general protocol allows a broad range of acylation, alkylation and sulfonamidation reactions to be performed in conjunction with a tandem Sonogashira coupling/cycloisomerization sequence. All three synthetic steps were conducted under full automation in the flow reactor, with no handling or isolation of intermediates, to afford the desired products in good yields. This fully automated, multistep flow approach opens the way to highly efficient generation of druglike heterocyclic systems as part of a lead discovery strategy or within a lead optimization program.

Pattern formation and three-dimensional instability in rotating flows

Science.gov (United States)

Christensen, Erik A.; Aubry, Nadine; Sorensen, Jens N.

1997-03-01

A fluid flow enclosed in a cylindrical container where fluid motion is created by the rotation of one end wall as a centrifugal fan is studied. Direct numerical simulations and spatio-temporal analysis have been performed in the early transition scenario, which includes a steady-unsteady transition and a breakdown of axisymmetric to three-dimensional flow behavior. In the early unsteady regime of the flow, the central vortex undergoes a vertical beating motion, accompanied by axisymmetric spikes formation on the edge of the breakdown bubble. As traveling waves, the spikes move along the central vortex core toward the rotating end-wall. As the Reynolds number is increased further, the flow undergoes a three-dimensional instability. The influence of the latter on the previous patterns is studied.

Direct numerical simulation of a compressible boundary-layer flow past an isolated three-dimensional hump in a high-speed subsonic regime

Science.gov (United States)

De Grazia, D.; Moxey, D.; Sherwin, S. J.; Kravtsova, M. A.; Ruban, A. I.

2018-02-01

In this paper we study the boundary-layer separation produced in a high-speed subsonic boundary layer by a small wall roughness. Specifically, we present a direct numerical simulation (DNS) of a two-dimensional boundary-layer flow over a flat plate encountering a three-dimensional Gaussian-shaped hump. This work was motivated by the lack of DNS data of boundary-layer flows past roughness elements in a similar regime which is typical of civil aviation. The Mach and Reynolds numbers are chosen to be relevant for aeronautical applications when considering small imperfections at the leading edge of wings. We analyze different heights of the hump: The smaller heights result in a weakly nonlinear regime, while the larger result in a fully nonlinear regime with an increasing laminar separation bubble arising downstream of the roughness element and the formation of a pair of streamwise counterrotating vortices which appear to support themselves.

Parallelized system for biopolymer degradation studies through automated microresonator measurement in liquid flow

DEFF Research Database (Denmark)

Casci Ceccacci, Andrea; Morelli, Lidia; Bosco, Filippo

2015-01-01

setup unit, the system allows high-throughput measurements of resonance frequency over microresonator arrays under controlled flow conditions. We here demonstrate the acquisition of statistical data on biopolymer films degradation under enzymatic reaction over a large sample of micromechanical......In this work we present a novel automated system which allows the study of enzymatic degradation of biopolymer films coated on micromechanical resonators. The system combines an optical readout based on Blu-Ray technology with a software-controlled scanning mechanism. Integrated with a microfluidic...

The role of optical flow in automated quality assessment of full-motion video

Science.gov (United States)

Harguess, Josh; Shafer, Scott; Marez, Diego

2017-09-01

In real-world video data, such as full-motion-video (FMV) taken from unmanned vehicles, surveillance systems, and other sources, various corruptions to the raw data is inevitable. This can be due to the image acquisition process, noise, distortion, and compression artifacts, among other sources of error. However, we desire methods to analyze the quality of the video to determine whether the underlying content of the corrupted video can be analyzed by humans or machines and to what extent. Previous approaches have shown that motion estimation, or optical flow, can be an important cue in automating this video quality assessment. However, there are many different optical flow algorithms in the literature, each with their own advantages and disadvantages. We examine the effect of the choice of optical flow algorithm (including baseline and state-of-the-art), on motionbased automated video quality assessment algorithms.

Numerical study on the three-dimensional scroll volute flow of centrifugal compressor

International Nuclear Information System (INIS)

Bae, Hwang; Chang, Keun Shik; Yoon, Ju Sig; Park, Ki Cheol

2005-01-01

Three dimensional turbulent flow in the scroll volute of centrifugal compressor has been numerically investigated in this paper by solving the Navier-Stokes equations and k -ε equation model. The computational grid for the flow field of the scroll volute has been constructed based on the multi-block grid, which is good to avoid the central grid singularity as well as to make grid stretching toward the volute wall. Numerical result has been obtained for the three-dimensional flow of scroll volute. The straight conical volute flow is also solved and compared with the scroll volute data. This comparison contributed to comprehend the effect of scroll in the three-dimensional volute flow of a centrifugal compressor

Three-dimensional features on oscillating microbubbles streaming flows

Science.gov (United States)

Rossi, Massimiliano; Marin, Alvaro G.; Wang, Cheng; Hilgenfeldt, Sascha; Kähler, Christian J.

2013-11-01

Ultrasound-driven oscillating micro-bubbles have been used as active actuators in microfluidic devices to perform manifold tasks such as mixing, sorting and manipulation of microparticles. A common configuration consists in side-bubbles, created by trapping air pockets in blind channels perpendicular to the main channel direction. This configuration results in bubbles with a semi-cylindrical shape that creates a streaming flow generally considered quasi two-dimensional. However, recent experiments performed with three-dimensional velocimetry methods have shown how microparticles can present significant three-dimensional trajectories, especially in regions close to the bubble interface. Several reasons will be discussed such as boundary effects of the bottom/top wall, deformation of the bubble interface leading to more complex vibrational modes, or bubble-particle interactions. In the present investigation, precise measurements of particle trajectories close to the bubble interface will be performed by means of 3D Astigmatic Particle Tracking Velocimetry. The results will allow us to characterize quantitatively the three-dimensional features of the streaming flow and to estimate its implications in practical applications as particle trapping, sorting or mixing.

A general theory of two- and three-dimensional rotational flow in subsonic and transonic turbomachines

Science.gov (United States)

Wu, Chung-Hua

1993-01-01

This report represents a general theory applicable to axial, radial, and mixed flow turbomachines operating at subsonic and supersonic speeds with a finite number of blades of finite thickness. References reflect the evolution of computational methods used, from the inception of the theory in the 50's to the high-speed computer era of the 90's. Two kinds of relative stream surfaces, S(sub 1) and S(sub 2), are introduced for the purpose of obtaining a three-dimensional flow solution through the combination of two-dimensional flow solutions. Nonorthogonal curvilinear coordinates are used for the governing equations. Methods of computing transonic flow along S(sub 1) and S(sub 2) stream surfaces are given for special cases as well as for fully three-dimensional transonic flows. Procedures pertaining to the direct solutions and inverse solutions are presented. Information on shock wave locations and shapes needed for computations are discussed. Experimental data from a Deutsche Forschungs- und Versuchsanstalt fur Luft- und Raumfahrt e.V. (DFVLR) rotor and from a Chinese Academy of Sciences (CAS) transonic compressor rotor are compared with the computed flow properties.

The feasibility of automated online flow cytometry for in-situ monitoring of microbial dynamics in aquatic ecosystems

Science.gov (United States)

Besmer, Michael D.; Weissbrodt, David G.; Kratochvil, Bradley E.; Sigrist, Jürg A.; Weyland, Mathias S.; Hammes, Frederik

2014-01-01

Fluorescent staining coupled with flow cytometry (FCM) is often used for the monitoring, quantification and characterization of bacteria in engineered and environmental aquatic ecosystems including seawater, freshwater, drinking water, wastewater, and industrial bioreactors. However, infrequent grab sampling hampers accurate characterization and subsequent understanding of microbial dynamics in all of these ecosystems. A logic technological progression is high throughput and full automation of the sampling, staining, measurement, and data analysis steps. Here we assess the feasibility and applicability of automated FCM by means of actual data sets produced with prototype instrumentation. As proof-of-concept we demonstrate examples of microbial dynamics in (i) flowing tap water from a municipal drinking water supply network and (ii) river water from a small creek subject to two rainfall events. In both cases, automated measurements were done at 15-min intervals during 12–14 consecutive days, yielding more than 1000 individual data points for each ecosystem. The extensive data sets derived from the automated measurements allowed for the establishment of baseline data for each ecosystem, as well as for the recognition of daily variations and specific events that would most likely be missed (or miss-characterized) by infrequent sampling. In addition, the online FCM data from the river water was combined and correlated with online measurements of abiotic parameters, showing considerable potential for a better understanding of cause-and-effect relationships in aquatic ecosystems. Although several challenges remain, the successful operation of an automated online FCM system and the basic interpretation of the resulting data sets represent a breakthrough toward the eventual establishment of fully automated online microbiological monitoring technologies. PMID:24917858

Automated segmentation of blood-flow regions in large thoracic arteries using 3D-cine PC-MRI measurements.

Science.gov (United States)

van Pelt, Roy; Nguyen, Huy; ter Haar Romeny, Bart; Vilanova, Anna

2012-03-01

Quantitative analysis of vascular blood flow, acquired by phase-contrast MRI, requires accurate segmentation of the vessel lumen. In clinical practice, 2D-cine velocity-encoded slices are inspected, and the lumen is segmented manually. However, segmentation of time-resolved volumetric blood-flow measurements is a tedious and time-consuming task requiring automation. Automated segmentation of large thoracic arteries, based solely on the 3D-cine phase-contrast MRI (PC-MRI) blood-flow data, was done. An active surface model, which is fast and topologically stable, was used. The active surface model requires an initial surface, approximating the desired segmentation. A method to generate this surface was developed based on a voxel-wise temporal maximum of blood-flow velocities. The active surface model balances forces, based on the surface structure and image features derived from the blood-flow data. The segmentation results were validated using volunteer studies, including time-resolved 3D and 2D blood-flow data. The segmented surface was intersected with a velocity-encoded PC-MRI slice, resulting in a cross-sectional contour of the lumen. These cross-sections were compared to reference contours that were manually delineated on high-resolution 2D-cine slices. The automated approach closely approximates the manual blood-flow segmentations, with error distances on the order of the voxel size. The initial surface provides a close approximation of the desired luminal geometry. This improves the convergence time of the active surface and facilitates parametrization. An active surface approach for vessel lumen segmentation was developed, suitable for quantitative analysis of 3D-cine PC-MRI blood-flow data. As opposed to prior thresholding and level-set approaches, the active surface model is topologically stable. A method to generate an initial approximate surface was developed, and various features that influence the segmentation model were evaluated. The active surface

Phase-measuring laser holographic interferometer for use in high speed flows

Science.gov (United States)

Yanta, William J.; Spring, W. Charles, III; Gross, Kimberly Uhrich; McArthur, J. Craig

Phase-measurement techniques have been applied to a dual-plate laser holographic interferometer (LHI). This interferometer has been used to determine the flowfield densities in a variety of two-dimensional and axisymmetric flows. In particular, LHI has been applied in three different experiments: flowfield measurements inside a two-dimensional scramjet inlet, flow over a blunt cone, and flow over an indented nose shape. Comparisons of experimentally determined densities with computational results indicate that, when phase-measurement techniques are used in conjunction with state-of-the-art image-processing instrumentation, holographic interferometry can be a diagnostic tool with high resolution, high accuracy, and rapid data retrieval.

A finite area scheme for shallow granular flows on three-dimensional surfaces

Science.gov (United States)

Rauter, Matthias

2017-04-01

Shallow granular flow models have become a popular tool for the estimation of natural hazards, such as landslides, debris flows and avalanches. The shallowness of the flow allows to reduce the three-dimensional governing equations to a quasi two-dimensional system. Three-dimensional flow fields are replaced by their depth-integrated two-dimensional counterparts, which yields a robust and fast method [1]. A solution for a simple shallow granular flow model, based on the so-called finite area method [3] is presented. The finite area method is an adaption of the finite volume method [4] to two-dimensional curved surfaces in three-dimensional space. This method handles the three dimensional basal topography in a simple way, making the model suitable for arbitrary (but mildly curved) topography, such as natural terrain. Furthermore, the implementation into the open source software OpenFOAM [4] is shown. OpenFOAM is a popular computational fluid dynamics application, designed so that the top-level code mimics the mathematical governing equations. This makes the code easy to read and extendable to more sophisticated models. Finally, some hints on how to get started with the code and how to extend the basic model will be given. I gratefully acknowledge the financial support by the OEAW project "beyond dense flow avalanches". Savage, S. B. & Hutter, K. 1989 The motion of a finite mass of granular material down a rough incline. Journal of Fluid Mechanics 199, 177-215. Ferziger, J. & Peric, M. 2002 Computational methods for fluid dynamics, 3rd edn. Springer. Tukovic, Z. & Jasak, H. 2012 A moving mesh finite volume interface tracking method for surface tension dominated interfacial fluid flow. Computers & fluids 55, 70-84. Weller, H. G., Tabor, G., Jasak, H. & Fureby, C. 1998 A tensorial approach to computational continuum mechanics using object-oriented techniques. Computers in physics 12(6), 620-631.

Three-dimensional nonlinear ideal MHD equilibria with field-aligned incompressible and compressible flows

International Nuclear Information System (INIS)

Moawad, S. M.; Ibrahim, D. A.

2016-01-01

The equilibrium properties of three-dimensional ideal magnetohydrodynamics (MHD) are investigated. Incompressible and compressible flows are considered. The governing equations are taken in a steady state such that the magnetic field is parallel to the plasma flow. Equations of stationary equilibrium for both of incompressible and compressible MHD flows are derived and described in a mathematical mode. For incompressible MHD flows, Alfvénic and non-Alfvénic flows with constant and variable magnetofluid density are investigated. For Alfvénic incompressible flows, the general three-dimensional solutions are determined with the aid of two potential functions of the velocity field. For non-Alfvénic incompressible flows, the stationary equilibrium equations are reduced to two differential constraints on the potential functions, flow velocity, magnetofluid density, and the static pressure. Some examples which may be of some relevance to axisymmetric confinement systems are presented. For compressible MHD flows, equations of the stationary equilibrium are derived with the aid of a single potential function of the velocity field. The existence of three-dimensional solutions for these MHD flows is investigated. Several classes of three-dimensional exact solutions for several cases of nonlinear equilibrium equations are presented.

High-throughput flow injection analysis mass spectroscopy with networked delivery of color-rendered results. 2. Three-dimensional spectral mapping of 96-well combinatorial chemistry racks.

Science.gov (United States)

Görlach, E; Richmond, R; Lewis, I

1998-08-01

For the last two years, the mass spectroscopy section of the Novartis Pharma Research Core Technology group has analyzed tens of thousands of multiple parallel synthesis samples from the Novartis Pharma Combinatorial Chemistry program, using an in-house developed automated high-throughput flow injection analysis electrospray ionization mass spectroscopy system. The electrospray spectra of these samples reflect the many structures present after the cleavage step from the solid support. The overall success of the sequential synthesis is mirrored in the purity of the expected end product, but the partial success of individual synthesis steps is evident in the impurities in the mass spectrum. However this latter reaction information, which is of considerable utility to the combinatorial chemist, is effectively hidden from view by the very large number of analyzed samples. This information is now revealed at the workbench of the combinatorial chemist by a novel three-dimensional display of each rack's complete mass spectral ion current using the in-house RackViewer Visual Basic application. Colorization of "forbidden loss" and "forbidden gas-adduct" zones, normalization to expected monoisotopic molecular weight, colorization of ionization intensity, and sorting by row or column were used in combination to highlight systematic patterns in the mass spectroscopy data.

Three-dimensional numerical study of heat transfer enhancement in separated flows

Science.gov (United States)

Kumar, Saurav; Vengadesan, S.

2017-11-01

The flow separation appears in a wide range of heat transfer applications and causes poor heat transfer performance. It motivates the study of heat transfer enhancement in laminar as well as turbulent flows over a backward facing step by means of an adiabatic fin mounted on the top wall. Recently, we have studied steady, 2-D numerical simulations in laminar flow and investigated the effect of fin length, location, and orientation. It revealed that the addition of fin causes enhancement of heat transfer and it is very effective to control the flow and thermal behavior. The fin is most effective and sensitive when it is placed exactly above the step. A slight displacement of the fin in upstream of the step causes the complete change of flow and thermal behavior. Based on the obtained 2-D results it is interesting to investigate the side wall effect in three-dimensional simulations. The comparison of two-dimensional and three-dimensional numerical simulations with the available experimental results will be presented. Special attention has to be given to capture unsteadiness in the flow and thermal field.

Automated multi-dimensional purification of tagged proteins.

Science.gov (United States)

Sigrell, Jill A; Eklund, Pär; Galin, Markus; Hedkvist, Lotta; Liljedahl, Pia; Johansson, Christine Markeland; Pless, Thomas; Torstenson, Karin

2003-01-01

The capacity for high throughput purification (HTP) is essential in fields such as structural genomics where large numbers of protein samples are routinely characterized in, for example, studies of structural determination, functionality and drug development. Proteins required for such analysis must be pure and homogenous and available in relatively large amounts. AKTA 3D system is a powerful automated protein purification system, which minimizes preparation, run-time and repetitive manual tasks. It has the capacity to purify up to 6 different His6- or GST-tagged proteins per day and can produce 1-50 mg protein per run at >90% purity. The success of automated protein purification increases with careful experimental planning. Protocol, columns and buffers need to be chosen with the final application area for the purified protein in mind.

Mining High-Dimensional Data

Science.gov (United States)

Wang, Wei; Yang, Jiong

With the rapid growth of computational biology and e-commerce applications, high-dimensional data becomes very common. Thus, mining high-dimensional data is an urgent problem of great practical importance. However, there are some unique challenges for mining data of high dimensions, including (1) the curse of dimensionality and more crucial (2) the meaningfulness of the similarity measure in the high dimension space. In this chapter, we present several state-of-art techniques for analyzing high-dimensional data, e.g., frequent pattern mining, clustering, and classification. We will discuss how these methods deal with the challenges of high dimensionality.

Three-dimensional investigation of the two-phase flow structure in a bubbly pipe flow

International Nuclear Information System (INIS)

Hassan, Y.A.; Schmidl, W.D.; Ortiz-Villafuerte, J.

1997-01-01

Particle Image Velocimetry (PIV) is a non-intrusive measurement technique, which can be used to study the structure of various fluid flows. PIV is used to measure the time varying full field velocity data of a particle-seeded flow field within either a two-dimensional plane or three-dimensional volume. PIV is a very efficient measurement technique since it can obtain both qualitative and quantitative spatial information about the flow field being studied. This information can be further processed into information such as vorticity and pathlines. Other flow measurement techniques (Laser Doppler Velocimetry, Hot Wire Anemometry, etc...) only provide quantitative information at a single point. PIV can be used to study turbulence structures if a sufficient amount of data can be acquired and analyzed, and it can also be extended to study two-phase flows if both phases can be distinguished. In this study, the flow structure around a bubble rising in a pipe filled with water was studied in three-dimensions. The velocity of the rising bubble and the velocity field of the surrounding water was measured. Then the turbulence intensities and Reynolds stresses were calculated from the experimental data. (author)

A soap film shock tube to study two-dimensional compressible flows

Energy Technology Data Exchange (ETDEWEB)

Wen, C.Y.; Chen, Y.M.; Chang-Jian, S.K. [Dept. of Mechanical Engineering, Da-Yeh University Chang-Hwa (Taiwan)

2001-07-01

A new experimental approach to the study of the two-dimensional compressible flow phenomena is presented. In this technique, a variety of compressible flows were generated by bursting plane vertical soap films. An aureole and a ''shock wave'' preceding the rim of the expanding hole were clearly observed using traditional high-speed flash photography and a fast line-scan charge coupled device (CCD) camera. The moving shock wave images obtained from the line-scan CCD camera were similar to the x-t diagrams in gas dynamics. The moving shock waves cause thickness jumps and induce supersonic flows. Photographs of the supersonic flows over a cylinder and a wedge are presented. The results suggest clearly the feasibility of the ''soap film shock tube''. (orig.)

Intermittent Lagrangian velocities and accelerations in three-dimensional porous medium flow.

Science.gov (United States)

Holzner, M; Morales, V L; Willmann, M; Dentz, M

2015-07-01

Intermittency of Lagrangian velocity and acceleration is a key to understanding transport in complex systems ranging from fluid turbulence to flow in porous media. High-resolution optical particle tracking in a three-dimensional (3D) porous medium provides detailed 3D information on Lagrangian velocities and accelerations. We find sharp transitions close to pore throats, and low flow variability in the pore bodies, which gives rise to stretched exponential Lagrangian velocity and acceleration distributions characterized by a sharp peak at low velocity, superlinear evolution of particle dispersion, and double-peak behavior in the propagators. The velocity distribution is quantified in terms of pore geometry and flow connectivity, which forms the basis for a continuous-time random-walk model that sheds light on the observed Lagrangian flow and transport behaviors.

The Three Dimensional Flow Field at the Exit of an Axial-Flow Turbine Rotor

Science.gov (United States)

Lakshminarayana, B.; Ristic, D.; Chu, S.

1998-01-01

A systematic and comprehensive investigation was performed to provide detailed data on the three dimensional viscous flow phenomena downstream of a modem turbine rotor and to understand the flow physics such as origin, nature, development of wakes, secondary flow, and leakage flow. The experiment was carried out in the Axial Flow Turbine Research Facility (AFTRF) at Penn State, with velocity measurements taken with a 3-D LDV System. Two radial traverses at 1% and 10% of chord downstream of the rotor have been performed to identify the three-dimensional flow features at the exit of the rotor blade row. Sufficient spatial resolution was maintained to resolve blade wake, secondary flow, and tip leakage flow. The wake deficit is found to be substantial, especially at 1% of chord downstream of the rotor. At this location, negative axial velocity occurs near the tip, suggesting flow separation in the tip clearance region. Turbulence intensities peak in the wake region, and cross- correlations are mainly associated with the velocity gradient of the wake deficit. The radial velocities, both in the wake and in the endwall region, are found to be substantial. Two counter-rotating secondary flows are identified in the blade passage, with one occupying the half span close to the casino and the other occupying the half span close to the hub. The tip leakage flow is well restricted to 10% immersion from the blade tip. There are strong vorticity distributions associated with these secondary flows and tip leakage flow. The passage averaged data are in good agreement with design values.

Three-dimensional flow and turbulence structure in electrostatic precipitator

DEFF Research Database (Denmark)

Ullum, Thorvald Uhrskov; Larsen, Poul Scheel; Özcan, Oktay

2002-01-01

Stereo PIV is employed to study the three-dimensional velocity and turbulence fields in a laboratory model of a negative corona, barbed-wire, smooth-plate, electrostatic precipitator (figure 1). The study is focused on determining the parametric effects of axial development, mean current density Jm...... and bulk velocity U0 on secondary flows and turbulence levels and structures due to the action of the three-dimensional electrostatic field on the charged gas. At constant bulk velocity (U0 = 1 m/s) and current density (Jm = 0.4 mA/m2), secondary flows in the form of rolls of axial vorticity with swirl...

Transition of a Three-Dimensional Unsteady Viscous Flow Analysis from a Research Environment to the Design Environment

Science.gov (United States)

Dorney, Suzanne; Dorney, Daniel J.; Huber, Frank; Sheffler, David A.; Turner, James E. (Technical Monitor)

2001-01-01

The advent of advanced computer architectures and parallel computing have led to a revolutionary change in the design process for turbomachinery components. Two- and three-dimensional steady-state computational flow procedures are now routinely used in the early stages of design. Unsteady flow analyses, however, are just beginning to be incorporated into design systems. This paper outlines the transition of a three-dimensional unsteady viscous flow analysis from the research environment into the design environment. The test case used to demonstrate the analysis is the full turbine system (high-pressure turbine, inter-turbine duct and low-pressure turbine) from an advanced turboprop engine.

Experimental investigation of three-dimensional flow instabilities in a rotating lid-driven cavity

DEFF Research Database (Denmark)

Sørensen, Jens Nørkær; Naumov, I.; Mikkelsen, Robert Flemming

2006-01-01

liquid. For the first time the onset of three-dimensionality and transition are analysed by combining the high spatial resolution of Particle Image Velocimetry (PIV) and the temporal accuracy of Laser Doppler Anemometry (LDA). A detailed mapping of the transition from steady and axisymmetric flow...

Reduced dimensionality (3,2)D NMR experiments and their automated analysis: implications to high-throughput structural studies on proteins.

Science.gov (United States)

Reddy, Jithender G; Kumar, Dinesh; Hosur, Ramakrishna V

2015-02-01

Protein NMR spectroscopy has expanded dramatically over the last decade into a powerful tool for the study of their structure, dynamics, and interactions. The primary requirement for all such investigations is sequence-specific resonance assignment. The demand now is to obtain this information as rapidly as possible and in all types of protein systems, stable/unstable, soluble/insoluble, small/big, structured/unstructured, and so on. In this context, we introduce here two reduced dimensionality experiments – (3,2)D-hNCOcanH and (3,2)D-hNcoCAnH – which enhance the previously described 2D NMR-based assignment methods quite significantly. Both the experiments can be recorded in just about 2-3 h each and hence would be of immense value for high-throughput structural proteomics and drug discovery research. The applicability of the method has been demonstrated using alpha-helical bovine apo calbindin-D9k P43M mutant (75 aa) protein. Automated assignment of this data using AUTOBA has been presented, which enhances the utility of these experiments. The backbone resonance assignments so derived are utilized to estimate secondary structures and the backbone fold using Web-based algorithms. Taken together, we believe that the method and the protocol proposed here can be used for routine high-throughput structural studies of proteins. Copyright © 2014 John Wiley & Sons, Ltd.

Elucidating high-dimensional cancer hallmark annotation via enriched ontology.

Science.gov (United States)

Yan, Shankai; Wong, Ka-Chun

2017-09-01

Cancer hallmark annotation is a promising technique that could discover novel knowledge about cancer from the biomedical literature. The automated annotation of cancer hallmarks could reveal relevant cancer transformation processes in the literature or extract the articles that correspond to the cancer hallmark of interest. It acts as a complementary approach that can retrieve knowledge from massive text information, advancing numerous focused studies in cancer research. Nonetheless, the high-dimensional nature of cancer hallmark annotation imposes a unique challenge. To address the curse of dimensionality, we compared multiple cancer hallmark annotation methods on 1580 PubMed abstracts. Based on the insights, a novel approach, UDT-RF, which makes use of ontological features is proposed. It expands the feature space via the Medical Subject Headings (MeSH) ontology graph and utilizes novel feature selections for elucidating the high-dimensional cancer hallmark annotation space. To demonstrate its effectiveness, state-of-the-art methods are compared and evaluated by a multitude of performance metrics, revealing the full performance spectrum on the full set of cancer hallmarks. Several case studies are conducted, demonstrating how the proposed approach could reveal novel insights into cancers. https://github.com/cskyan/chmannot. Copyright © 2017 Elsevier Inc. All rights reserved.

Three-Dimensional Mapping of Air Flow at an Urban Canyon Intersection

Science.gov (United States)

Carpentieri, Matteo; Robins, Alan G.; Baldi, Sandro

2009-11-01

In this experimental work both qualitative (flow visualisation) and quantitative (laser Doppler anemometry) methods were applied in a wind tunnel in order to describe the complex three-dimensional flow field in a real environment (a street canyon intersection). The main aim was an examination of the mean flow, turbulence and flow pathlines characterising a complex three-dimensional urban location. The experiments highlighted the complexity of the observed flows, particularly in the upwind region of the intersection. In this complex and realistic situation some details of the upwind flow, such as the presence of two tall towers, play an important role in defining the flow field within the intersection, particularly at roof level. This effect is likely to have a strong influence on the mass exchange mechanism between the canopy flow and the air aloft, and therefore the distribution of pollutants. This strong interaction between the flows inside and outside the urban canopy is currently neglected in most state-of-the-art local scale dispersion models.

Using travel times to simulate multi-dimensional bioreactive transport in time-periodic flows.

Science.gov (United States)

Sanz-Prat, Alicia; Lu, Chuanhe; Finkel, Michael; Cirpka, Olaf A

2016-04-01

In travel-time models, the spatially explicit description of reactive transport is replaced by associating reactive-species concentrations with the travel time or groundwater age at all locations. These models have been shown adequate for reactive transport in river-bank filtration under steady-state flow conditions. Dynamic hydrological conditions, however, can lead to fluctuations of infiltration velocities, putting the validity of travel-time models into question. In transient flow, the local travel-time distributions change with time. We show that a modified version of travel-time based reactive transport models is valid if only the magnitude of the velocity fluctuates, whereas its spatial orientation remains constant. We simulate nonlinear, one-dimensional, bioreactive transport involving oxygen, nitrate, dissolved organic carbon, aerobic and denitrifying bacteria, considering periodic fluctuations of velocity. These fluctuations make the bioreactive system pulsate: The aerobic zone decreases at times of low velocity and increases at those of high velocity. For the case of diurnal fluctuations, the biomass concentrations cannot follow the hydrological fluctuations and a transition zone containing both aerobic and obligatory denitrifying bacteria is established, whereas a clear separation of the two types of bacteria prevails in the case of seasonal velocity fluctuations. We map the 1-D results to a heterogeneous, two-dimensional domain by means of the mean groundwater age for steady-state flow in both domains. The mapped results are compared to simulation results of spatially explicit, two-dimensional, advective-dispersive-bioreactive transport subject to the same relative fluctuations of velocity as in the one-dimensional model. The agreement between the mapped 1-D and the explicit 2-D results is excellent. We conclude that travel-time models of nonlinear bioreactive transport are adequate in systems of time-periodic flow if the flow direction does not change

Three-dimensional power Doppler sonography: imaging and quantifying blood flow and vascularization.

Science.gov (United States)

Pairleitner, H; Steiner, H; Hasenoehrl, G; Staudach, A

1999-08-01

To assess the feasibility of imaging low-velocity blood flow in adnexal masses by transvaginal three-dimensional power Doppler sonography, to analyze three-dimensional power Doppler sonography data sets with a new computer-assisted method and to test the reproducibility of the technique. A commercially available 5-MHz Combison 530 ultrasound system was used to perform three-dimensional power Doppler sonography transvaginally. A cube (= volume of interest) was defined enclosing the vessels of the cyst and the Cartesian characteristics were stored on a hard disk. This cube was analyzed using specially designed software. Five indices representing vascularization (the vascularization index (VI) or blood flow (the flow index (FI)) or both (the vascularization-flow index (VFI)) were calculated. The intraobserver repeatability of cube definition and scan repetition was assessed using Hartley's test for homogeneous variances. Interobserver agreement was assessed by the Pearson correlation coefficient. Imaging of vessels with low-velocity blood flow by three-dimensional power Doppler sonography and cube definition was possible in all adnexal massed studied. In some cases even induced non-vascular flow related to endometriosis was detected. The calculated F value with intraobserver repeated Cartesian file-saving ranged from 0 to 18.8, with intraobserver scan repetition from 4.74 to 24.8 for VI, FI 1, FI 2 and VFI 1; for VFI 2 the calculated F value was 64. The interobserver correlation coefficient ranged between 0.83 and 0.92 for VI, FI 1, FI 2 and VFI 1; for VFI 2 the correlation coefficient was less than 0.75. Vessels with low-velocity blood flow can be imaged using three-dimensional power Doppler sonography. Induced non-vascular flow was detected in endometriotic cyst fluid. Three-dimensional power Doppler sonography combined with the cube method gave reproducible information for all indices except VFI 2. These indices might prove to be a new predictor in all fields of

Athermal mechanisms of size-dependent crystal flow gleaned from three-dimensional discrete dislocation simulations

International Nuclear Information System (INIS)

Rao, S.I.; Dimiduk, D.M.; Parthasarathy, T.A.; Uchic, M.D.; Tang, M.; Woodward, C.

2008-01-01

Recent experimental studies have revealed that micrometer-scale face-centered cubic (fcc) crystals show strong strengthening effects, even at high initial dislocation densities. We use large-scale three-dimensional discrete dislocation simulations (DDS) to explicitly model the deformation behavior of fcc Ni microcrystals in the size range of 0.5-20 μm. This study shows that two size-sensitive athermal hardening processes, beyond forest hardening, are sufficient to develop the dimensional scaling of the flow stress, stochastic stress variation, flow intermittency and high initial strain-hardening rates, similar to experimental observations for various materials. One mechanism, source-truncation hardening, is especially potent in micrometer-scale volumes. A second mechanism, termed exhaustion hardening, results from a breakdown of the mean-field conditions for forest hardening in small volumes, thus biasing the statistics of ordinary dislocation processes

Three-dimensional flow structure measurements behind a queue of studied model vehicles

International Nuclear Information System (INIS)

Huang, J.F.; Chan, T.L.; Zhou, Y.

2009-01-01

The three-dimensional flow structures of a queue of studied model vehicles (i.e., one-, two- and three-vehicle cases) were investigated comprehensively in a closed-circuit wind tunnel using particle image velocimetry (PIV) for the typical urban vehicle speeds (i.e., 10, 30 and 50 km/h). In this three-dimensional vehicle wake, a pair of longitudinal vortices is characterized by counter-rotating and moving downstream at relatively low velocity than their surrounding flow. The flow structures of multiple studied model vehicles are dominated by the wake generated from the last studied model vehicle but the preceding studied model vehicle(s) also has/have some minor effects. Cross-sectional turbulence distribution is non-uniform in the far-wake region for all studied cases. The lowest turbulence occurs at the center part of the vehicle wake while high turbulence occurs at its two sides. As such, it may lead to considerable underestimation in turbulence magnitude if the measurement is only taken along the centerline of the vehicle wake.

Predicting transition in two- and three-dimensional separated flows

International Nuclear Information System (INIS)

Cutrone, L.; De Palma, P.; Pascazio, G.; Napolitano, M.

2008-01-01

This paper is concerned with the numerical prediction of two- and three-dimensional transitional separated flows of turbomachinery interest. The recently proposed single-point transition model based on the use of a laminar kinetic energy transport equation is considered, insofar as it does not require to evaluate any integral parameter, such as boundary-layer thickness, and is thus directly applicable to three-dimensional flows. A well established model, combining a transition-onset correlation with an intermittency transport equation, is also used for comparison. Both models are implemented within a Reynolds-averaged Navier-Stokes solver employing a low-Reynolds-number k-ω turbulence model. The performance of the transition models have been evaluated and tested versus well-documented incompressible flows past a flat plate with semi-circular leading edge, namely: tests T3L2, T3L3, T3L5, and T3LA1 of ERCOFTAC, with different Reynolds numbers and free-stream conditions, the last one being characterized by a non-zero pressure gradient. In all computations, the first model has proven as adequate as or superior to the second one and has been then applied with success to two more complex test cases, for which detailed experimental data are available in the literature, namely: the two- and three-dimensional flows through the T106 linear turbine cascade

Introduction to compressible fluid flow

CERN Document Server

Oosthuizen, Patrick H

2013-01-01

IntroductionThe Equations of Steady One-Dimensional Compressible FlowSome Fundamental Aspects of Compressible FlowOne-Dimensional Isentropic FlowNormal Shock WavesOblique Shock WavesExpansion Waves - Prandtl-Meyer FlowVariable Area FlowsAdiabatic Flow with FrictionFlow with Heat TransferLinearized Analysis of Two-Dimensional Compressible FlowsHypersonic and High-Temperature FlowsHigh-Temperature Gas EffectsLow-Density FlowsBibliographyAppendices

A Parallel Multiblock Structured Grid Method with Automated Interblocked Unstructured Grids for Chemically Reacting Flows

Science.gov (United States)

Spiegel, Seth Christian

An automated method for using unstructured grids to patch non- C0 interfaces between structured blocks has been developed in conjunction with a finite-volume method for solving chemically reacting flows on unstructured grids. Although the standalone unstructured solver, FVFLO-NCSU, is capable of resolving flows for high-speed aeropropulsion devices with complex geometries, unstructured-mesh algorithms are inherently inefficient when compared to their structured counterparts. However, the advantages of structured algorithms in developing a flow solution in a timely manner can be negated by the amount of time required to develop a mesh for complex geometries. The global domain can be split up into numerous smaller blocks during the grid-generation process to alleviate some of the difficulties in creating these complex meshes. An even greater abatement can be found by allowing the nodes on abutting block interfaces to be nonmatching or non-C 0 continuous. One code capable of solving chemically reacting flows on these multiblock grids is VULCAN, which uses a nonconservative approach for patching non-C0 block interfaces. The developed automated unstructured-grid patching algorithm has been installed within VULCAN to provide it the capability of a fully conservative approach for patching non-C0 block interfaces. Additionally, the FVFLO-NCSU solver algorithms have been deeply intertwined with the VULCAN source code to solve chemically reacting flows on these unstructured patches. Finally, the CGNS software library was added to the VULCAN postprocessor so structured and unstructured data can be stored in a single compact file. This final upgrade to VULCAN has been successfully installed and verified using test cases with particular interest towards those involving grids with non- C0 block interfaces.

hdm: High-dimensional metrics

OpenAIRE

Chernozhukov, Victor; Hansen, Christian; Spindler, Martin

2016-01-01

In this article the package High-dimensional Metrics (\\texttt{hdm}) is introduced. It is a collection of statistical methods for estimation and quantification of uncertainty in high-dimensional approximately sparse models. It focuses on providing confidence intervals and significance testing for (possibly many) low-dimensional subcomponents of the high-dimensional parameter vector. Efficient estimators and uniformly valid confidence intervals for regression coefficients on target variables (e...

Two-dimensional heat flow apparatus

Science.gov (United States)

McDougall, Patrick; Ayars, Eric

2014-06-01

We have created an apparatus to quantitatively measure two-dimensional heat flow in a metal plate using a grid of temperature sensors read by a microcontroller. Real-time temperature data are collected from the microcontroller by a computer for comparison with a computational model of the heat equation. The microcontroller-based sensor array allows previously unavailable levels of precision at very low cost, and the combination of measurement and modeling makes for an excellent apparatus for the advanced undergraduate laboratory course.

Three-dimensional lattice Boltzmann model for compressible flows.

Science.gov (United States)

Sun, Chenghai; Hsu, Andrew T

2003-07-01

A three-dimensional compressible lattice Boltzmann model is formulated on a cubic lattice. A very large particle-velocity set is incorporated in order to enable a greater variation in the mean velocity. Meanwhile, the support set of the equilibrium distribution has only six directions. Therefore, this model can efficiently handle flows over a wide range of Mach numbers and capture shock waves. Due to the simple form of the equilibrium distribution, the fourth-order velocity tensors are not involved in the formulation. Unlike the standard lattice Boltzmann model, no special treatment is required for the homogeneity of fourth-order velocity tensors on square lattices. The Navier-Stokes equations were recovered, using the Chapman-Enskog method from the Bhatnagar-Gross-Krook (BGK) lattice Boltzmann equation. The second-order discretization error of the fluctuation velocity in the macroscopic conservation equation was eliminated by means of a modified collision invariant. The model is suitable for both viscous and inviscid compressible flows with or without shocks. Since the present scheme deals only with the equilibrium distribution that depends only on fluid density, velocity, and internal energy, boundary conditions on curved wall are easily implemented by an extrapolation of macroscopic variables. To verify the scheme for inviscid flows, we have successfully simulated a three-dimensional shock-wave propagation in a box and a normal shock of Mach number 10 over a wedge. As an application to viscous flows, we have simulated a flat plate boundary layer flow, flow over a cylinder, and a transonic flow over a NACA0012 airfoil cascade.

Some considerations on automated image processing of pathline photographs

International Nuclear Information System (INIS)

Kobayashi, T.; Saga, T.; Segawa, S.

1987-01-01

It is presently shown that flow visualization velocity vectors can be automatically obtained from tracer particle photographs by means of an image processing system. The system involves automated gray level threshold selection during the digitization process and separation or erasure of the intersecting path lines, followed by use of the pathline picture in the identification process and an adjustment of the averaging area in the rearrangement process. Attention is given to the results obtained for two-dimensional flows past an airfoil cascade and around a circular cylinder. 7 references

Measurement of multi-dimensional flow structure for flow boiling in a tube

International Nuclear Information System (INIS)

Adachi, Yu; Ito, Daisuke; Saito, Yasushi

2014-01-01

With an aim of the measurement of multi-dimensional flow structure of in-tube boiling two-phase flow, the authors built their own wire mesh measurement system based on electrical conductivity measurement, and examined the relationship between the electrical conductivity obtained by the wire mesh sensor and the void fraction. In addition, the authors measured the void fraction using neutron radiography, and compared the result with the measured value using the wire mesh sensor. From the comparison with neutron radiography, it was found that the new method underestimated the void fraction in the flow in the vicinity of the void fraction of 0.2-0.5, similarly to the conventional result. In addition, since the wire mesh sensor cannot measure dispersed droplets, it tends to overestimate the void fraction in the high void fraction region, such as churn flow accompanied by droplet generation. In the electrical conductivity wire-mesh sensor method, it is necessary to correctly take into account the effect of liquid film or droplets. The authors also built a measurement system based on the capacitance wire mesh sensor method using the difference in dielectric constant, performed the confirmation of transmission and reception signals using deionized water as a medium, and showed the validity of the system. As for the dispersed droplets, the capacitance method has a potential to be able to measure them. (A.O.)

Three-dimensional numerical study of flow and heat transfer from a cube placed in a uniform flow

International Nuclear Information System (INIS)

Saha, A.K.

2006-01-01

The fluid flow and heat transfer from a stationary cube placed in a uniform flow is studied numerically. The three-dimensional unsteady Navier Stokes and energy equations are solved using higher order temporal and spatial discretizations. Computations are carried out for a Reynolds number range of 50-400. At Re = 218, the symmetry seen at Re = 216 breaks down in one of the orthogonal planes while remains symmetric on the other thus showing a planar symmetry. The flow experiences a Hopf bifurcation at a Reynolds number between 265 and 270 and becomes unsteady. The thermal field also shows all the transitions same as those of flow transitions. The drag coefficient decreases while the heat transfer shows an increasing trend with Reynolds number. The transition from a steady to an unsteady flow does not show any significant increase in the heat transfer. Both the flow and thermal fields show multiple frequencies at high Reynolds number and the number of frequencies increases with the increase in Reynolds number. The instantaneous flow and temperature field are seen to deviate from planar symmetry at Re = 400

Multiple-canister flow and transport code in 2-dimensional space. MCFT2D: user's manual

International Nuclear Information System (INIS)

Lim, Doo-Hyun

2006-03-01

A two-dimensional numerical code, MCFT2D (Multiple-Canister Flow and Transport code in 2-Dimensional space), has been developed for groundwater flow and radionuclide transport analyses in a water-saturated high-level radioactive waste (HLW) repository with multiple canisters. A multiple-canister configuration and a non-uniform flow field of the host rock are incorporated in the MCFT2D code. Effects of heterogeneous flow field of the host rock on migration of nuclides can be investigated using MCFT2D. The MCFT2D enables to take into account the various degrees of the dependency of canister configuration for nuclide migration in a water-saturated HLW repository, while the dependency was assumed to be either independent or perfectly dependent in previous studies. This report presents features of the MCFT2D code, numerical simulation using MCFT2D code, and graphical representation of the numerical results. (author)

Three dimensional computations of the flow around a LM19 rotor

Energy Technology Data Exchange (ETDEWEB)

Hambraeus, T. [FFA, Bromma (Sweden)

1997-12-31

To achieve insight in the flow phenomenon occurring in wind power engineering modeling of the flow through the basic governing equations, Navier-Stokes and Euler, can be a great complement to experiments and other computational methods such as the BEM (Blade Element Momentum). Navier-Stokes methods is regularly used in prediction of air-foil flows but then mostly under attached flow conditions. One of the main differences between air-foil computations for aircraft industry and computations for wind turbine applications is that the former is not very interested in separated flow while for the latter case this is part of the operating conditions. It has been noted that separated flow poses problems since the most popular turbulence models such as Baldwin-Lomax and the {kappa}-{epsilon} model seems to over estimate the amount of turbulent viscosity produced and thus suppressing the separation. The work with finding better turbulence models is presently an area with large amount of research offering improved models. However, in the present report only the two mentioned turbulence models have been used. The present report shows computational results obtained with the Navier-Stokes solver EU-RANUS. First the results from a two-dimensional verification cases are shown to verify that the solver produces results comparable with other solvers. The flow computed is attached flow and slightly separated flow over the so called Profile-A. Secondly three dimensional computations of the flow over a full three dimensional rotor at attached and stalled conditions is shown. The computed results are compared with measured power data from field experiments. (EG)

Real-time three-dimensional color doppler evaluation of the flow convergence zone for quantification of mitral regurgitation: Validation experimental animal study and initial clinical experience

Science.gov (United States)

Sitges, Marta; Jones, Michael; Shiota, Takahiro; Qin, Jian Xin; Tsujino, Hiroyuki; Bauer, Fabrice; Kim, Yong Jin; Agler, Deborah A.; Cardon, Lisa A.; Zetts, Arthur D.;

Development and assessment of multi-dimensional flow model in MARS compared with the RPI air-water experiment

International Nuclear Information System (INIS)

Lee, Seok Min; Lee, Un Chul; Bae, Sung Won; Chung, Bub Dong

2004-01-01

The Multi-Dimensional flow models in system code have been developed during the past many years. RELAP5-3D, CATHARE and TRACE has its specific multi-dimensional flow models and successfully applied it to the system safety analysis. In KAERI, also, MARS(Multi-dimensional Analysis of Reactor Safety) code was developed by integrating RELAP5/MOD3 code and COBRA-TF code. Even though COBRA-TF module can analyze three-dimensional flow models, it has a limitation to apply 3D shear stress dominant phenomena or cylindrical geometry. Therefore, Multi-dimensional analysis models are newly developed by implementing three-dimensional momentum flux and diffusion terms. The multi-dimensional model has been assessed compared with multi-dimensional conceptual problems and CFD code results. Although the assessment results were reasonable, the multi-dimensional model has not been validated to two-phase flow using experimental data. In this paper, the multi-dimensional air-water two-phase flow experiment was simulated and analyzed

Numerical simulation of multi-dimensional two-phase flow based on flux vector splitting

Energy Technology Data Exchange (ETDEWEB)

Staedtke, H.; Franchello, G.; Worth, B. [Joint Research Centre - Ispra Establishment (Italy)

1995-09-01

This paper describes a new approach to the numerical simulation of transient, multidimensional two-phase flow. The development is based on a fully hyperbolic two-fluid model of two-phase flow using separated conservation equations for the two phases. Features of the new model include the existence of real eigenvalues, and a complete set of independent eigenvectors which can be expressed algebraically in terms of the major dependent flow parameters. This facilitates the application of numerical techniques specifically developed for high speed single-phase gas flows which combine signal propagation along characteristic lines with the conservation property with respect to mass, momentum and energy. Advantages of the new model for the numerical simulation of one- and two- dimensional two-phase flow are discussed.

Experimental study on two-dimensional film flow with local measurement methods

Energy Technology Data Exchange (ETDEWEB)

Yang, Jin-Hwa, E-mail: evo03@snu.ac.kr [Nuclear Thermal-Hydraulic Engineering Laboratory, Seoul National University, Gwanak 599, Gwanak-ro, Gwanak-gu, Seoul 151-742 (Korea, Republic of); Korea Atomic Energy Research Institute, 989-111, Daedeok-daero, Yuseong-gu, Daejeon 305-600 (Korea, Republic of); Cho, Hyoung-Kyu [Nuclear Thermal-Hydraulic Engineering Laboratory, Seoul National University, Gwanak 599, Gwanak-ro, Gwanak-gu, Seoul 151-742 (Korea, Republic of); Kim, Seok [Korea Atomic Energy Research Institute, 989-111, Daedeok-daero, Yuseong-gu, Daejeon 305-600 (Korea, Republic of); Euh, Dong-Jin, E-mail: djeuh@kaeri.re.kr [Korea Atomic Energy Research Institute, 989-111, Daedeok-daero, Yuseong-gu, Daejeon 305-600 (Korea, Republic of); Park, Goon-Cherl [Nuclear Thermal-Hydraulic Engineering Laboratory, Seoul National University, Gwanak 599, Gwanak-ro, Gwanak-gu, Seoul 151-742 (Korea, Republic of)

2015-12-01

Highlights: • An experimental study on the two-dimensional film flow with lateral air injection was performed. • The ultrasonic thickness gauge was used to measure the local liquid film thickness. • The depth-averaged PIV (Particle Image Velocimetry) method was applied to measure the local liquid film velocity. • The uncertainty of the depth-averaged PIV was quantified with a validation experiment. • Characteristics of two-dimensional film flow were classified following the four different flow patterns. - Abstract: In an accident condition of a nuclear reactor, multidimensional two-phase flows may occur in the reactor vessel downcomer and reactor core. Therefore, those have been regarded as important issues for an advanced thermal-hydraulic safety analysis. In particular, the multi-dimensional two-phase flow in the upper downcomer during the reflood phase of large break loss of coolant accident appears with an interaction between a downward liquid and a transverse gas flow, which determines the bypass flow rate of the emergency core coolant and subsequently, the reflood coolant flow rate. At present, some thermal-hydraulic analysis codes incorporate multidimensional modules for the nuclear reactor safety analysis. However, their prediction capability for the two-phase cross flow in the upper downcomer has not been validated sufficiently against experimental data based on local measurements. For this reason, an experimental study was carried out for the two-phase cross flow to clarify the hydraulic phenomenon and provide local measurement data for the validation of the computational tools. The experiment was performed in a 1/10 scale unfolded downcomer of Advanced Power Reactor 1400 (APR1400). Pitot tubes, a depth-averaged PIV method and ultrasonic thickness gauge were applied for local measurement of the air velocity, the liquid film velocity and the liquid film thickness, respectively. The uncertainty of the depth-averaged PIV method for the averaged

Experimental study on two-dimensional film flow with local measurement methods

International Nuclear Information System (INIS)

Yang, Jin-Hwa; Cho, Hyoung-Kyu; Kim, Seok; Euh, Dong-Jin; Park, Goon-Cherl

2015-01-01

Highlights: • An experimental study on the two-dimensional film flow with lateral air injection was performed. • The ultrasonic thickness gauge was used to measure the local liquid film thickness. • The depth-averaged PIV (Particle Image Velocimetry) method was applied to measure the local liquid film velocity. • The uncertainty of the depth-averaged PIV was quantified with a validation experiment. • Characteristics of two-dimensional film flow were classified following the four different flow patterns. - Abstract: In an accident condition of a nuclear reactor, multidimensional two-phase flows may occur in the reactor vessel downcomer and reactor core. Therefore, those have been regarded as important issues for an advanced thermal-hydraulic safety analysis. In particular, the multi-dimensional two-phase flow in the upper downcomer during the reflood phase of large break loss of coolant accident appears with an interaction between a downward liquid and a transverse gas flow, which determines the bypass flow rate of the emergency core coolant and subsequently, the reflood coolant flow rate. At present, some thermal-hydraulic analysis codes incorporate multidimensional modules for the nuclear reactor safety analysis. However, their prediction capability for the two-phase cross flow in the upper downcomer has not been validated sufficiently against experimental data based on local measurements. For this reason, an experimental study was carried out for the two-phase cross flow to clarify the hydraulic phenomenon and provide local measurement data for the validation of the computational tools. The experiment was performed in a 1/10 scale unfolded downcomer of Advanced Power Reactor 1400 (APR1400). Pitot tubes, a depth-averaged PIV method and ultrasonic thickness gauge were applied for local measurement of the air velocity, the liquid film velocity and the liquid film thickness, respectively. The uncertainty of the depth-averaged PIV method for the averaged

A Comparison of Simplified Two-dimensional Flow Models Exemplified by Water Flow in a Cavern

Science.gov (United States)

Prybytak, Dzmitry; Zima, Piotr

2017-12-01

The paper shows the results of a comparison of simplified models describing a two-dimensional water flow in the example of a water flow through a straight channel sector with a cavern. The following models were tested: the two-dimensional potential flow model, the Stokes model and the Navier-Stokes model. In order to solve the first two, the boundary element method was employed, whereas to solve the Navier-Stokes equations, the open-source code library OpenFOAM was applied. The results of numerical solutions were compared with the results of measurements carried out on a test stand in a hydraulic laboratory. The measurements were taken with an ADV probe (Acoustic Doppler Velocimeter). Finally, differences between the results obtained from the mathematical models and the results of laboratory measurements were analysed.

Automated work-flow for processing high-resolution direct infusion electrospray ionization mass spectral fingerprints

DEFF Research Database (Denmark)

Hansen, Michael Adsetts Edberg; Smedsgaard, Jørn

2007-01-01

an automated data processing pipeline to compare large numbers of fingerprint spectra from direct infusion experiments analyzed by high resolution MS. We describe some of the intriguing problems that have to be addressed. starting with the conversion and pre-processing of the raw data to the final data......The use of mass spectrometry (MS) is pivotal in analyses of the metabolome and presents a major challenge for subsequent data processing. While the last few years have given new high performance instruments, there has not been a comparable development in data processing. In this paper we discuss...

High-Dimensional Modeling for Cytometry: Building Rock Solid Models Using GemStone™ and Verity Cen-se'™ High-Definition t-SNE Mapping.

Science.gov (United States)

Bruce Bagwell, C

2018-01-01

This chapter outlines how to approach the complex tasks associated with designing models for high-dimensional cytometry data. Unlike gating approaches, modeling lends itself to automation and accounts for measurement overlap among cellular populations. Designing these models is now easier because of a new technique called high-definition t-SNE mapping. Nontrivial examples are provided that serve as a guide to create models that are consistent with data.

Analysis of the three dimensional flow in a turbine scroll

Science.gov (United States)

Hamed, A.; Baskharone, E.

1979-01-01

The present analysis describes the three-dimensional compressible inviscid flow in the scroll and the vaneless nozzle of a radial inflow turbine. The solution to this flow field, which is further complicated by the geometrical shape of the boundaries, is obtained using the finite element method. Symmetric and nonsymmetric scroll cross sectional geometries are investigated to determine their effect on the general flow field and on the exit flow conditions.

Highly automated driving, secondary task performance, and driver state.

Science.gov (United States)

Merat, Natasha; Jamson, A Hamish; Lai, Frank C H; Carsten, Oliver

2012-10-01

A driving simulator study compared the effect of changes in workload on performance in manual and highly automated driving. Changes in driver state were also observed by examining variations in blink patterns. With the addition of a greater number of advanced driver assistance systems in vehicles, the driver's role is likely to alter in the future from an operator in manual driving to a supervisor of highly automated cars. Understanding the implications of such advancements on drivers and road safety is important. A total of 50 participants were recruited for this study and drove the simulator in both manual and highly automated mode. As well as comparing the effect of adjustments in driving-related workload on performance, the effect of a secondary Twenty Questions Task was also investigated. In the absence of the secondary task, drivers' response to critical incidents was similar in manual and highly automated driving conditions. The worst performance was observed when drivers were required to regain control of driving in the automated mode while distracted by the secondary task. Blink frequency patterns were more consistent for manual than automated driving but were generally suppressed during conditions of high workload. Highly automated driving did not have a deleterious effect on driver performance, when attention was not diverted to the distracting secondary task. As the number of systems implemented in cars increases, an understanding of the implications of such automation on drivers' situation awareness, workload, and ability to remain engaged with the driving task is important.

Research on one-dimensional two-phase flow

International Nuclear Information System (INIS)

Adachi, Hiromichi

1988-10-01

In Part I the fundamental form of the hydrodynamic basic equations for a one-dimensional two-phase flow (two-fluid model) is described. Discussions are concentrated on the treatment of phase change inertial force terms in the equations of motion and the author's equations of motion which have a remarkable uniqueness on the following three points. (1) To express force balance of unit mass two-phase fluid instead of that of unit volume two-phase fluid. (2) To pick up the unit existing mass and the unit flowing mass as the unit mass of two-phase fluid. (3) To apply the kinetic energy principle instead of the momentum low in the evaluation of steady inertial force term. In these three, the item (1) is for excluding a part of momentum change or kinetic energy change due to mass change of the examined part of fluid, which is independent of force. The item (2) is not to introduce a phenomenological physical model into the evaluation of phase change inertial force term. And the item (3) is for correctly applying the momentum law taking into account the difference of representative velocities between the main flow fluid (vapor phase or liquid phase) and the phase change part of fluid. In Part II, characteristics of various kinds of high speed two-phase flow are clarified theoretically by the basic equations derived. It is demonstrated that the steam-water two-phase critical flow with violent flashing and the airwater two-phase critical flow without phase change can be described with fundamentally the same basic equations. Furthermore, by comparing the experimental data from the two-phase critical discharge test and the theoretical prediction, the two-phase discharge coefficient, C D , for large sharp-edged orifice is determined as the value which is not affected by the experimental facility characteristics, etc. (author)

Development of One Dimensional Hyperbolic Coupled Solver for Two-Phase Flows

International Nuclear Information System (INIS)

Kim, Eoi Jin; Kim, Jong Tae; Jeong, Jae June

2008-08-01

The purpose of this study is a code development for one dimensional two-phase two-fluid flows. In this study, the computations of two-phase flow were performed by using the Roe scheme which is one of the upwind schemes. The upwind scheme is widely used in the computational fluid dynamics because it can capture discontinuities clearly such as a shock. And this scheme is applicable to multi-phase flows by the extension methods which were developed by Toumi, Stadtke, etc. In this study, the extended Roe upwind scheme by Toumi for two-phase flow was implemented in the one-dimensional code. The scheme was applied to a shock tube problem and a water faucet problem. This numerical method seems efficient for non oscillating solutions of two phase flow problems, and also capable for capturing discontinuities

Development of One Dimensional Hyperbolic Coupled Solver for Two-Phase Flows

Energy Technology Data Exchange (ETDEWEB)

Kim, Eoi Jin; Kim, Jong Tae; Jeong, Jae June

2008-08-15

The purpose of this study is a code development for one dimensional two-phase two-fluid flows. In this study, the computations of two-phase flow were performed by using the Roe scheme which is one of the upwind schemes. The upwind scheme is widely used in the computational fluid dynamics because it can capture discontinuities clearly such as a shock. And this scheme is applicable to multi-phase flows by the extension methods which were developed by Toumi, Stadtke, etc. In this study, the extended Roe upwind scheme by Toumi for two-phase flow was implemented in the one-dimensional code. The scheme was applied to a shock tube problem and a water faucet problem. This numerical method seems efficient for non oscillating solutions of two phase flow problems, and also capable for capturing discontinuities.

High-dimensional single-cell cancer biology.

Science.gov (United States)

Irish, Jonathan M; Doxie, Deon B

2014-01-01

Cancer cells are distinguished from each other and from healthy cells by features that drive clonal evolution and therapy resistance. New advances in high-dimensional flow cytometry make it possible to systematically measure mechanisms of tumor initiation, progression, and therapy resistance on millions of cells from human tumors. Here we describe flow cytometry techniques that enable a "single-cell " view of cancer. High-dimensional techniques like mass cytometry enable multiplexed single-cell analysis of cell identity, clinical biomarkers, signaling network phospho-proteins, transcription factors, and functional readouts of proliferation, cell cycle status, and apoptosis. This capability pairs well with a signaling profiles approach that dissects mechanism by systematically perturbing and measuring many nodes in a signaling network. Single-cell approaches enable study of cellular heterogeneity of primary tissues and turn cell subsets into experimental controls or opportunities for new discovery. Rare populations of stem cells or therapy-resistant cancer cells can be identified and compared to other types of cells within the same sample. In the long term, these techniques will enable tracking of minimal residual disease (MRD) and disease progression. By better understanding biological systems that control development and cell-cell interactions in healthy and diseased contexts, we can learn to program cells to become therapeutic agents or target malignant signaling events to specifically kill cancer cells. Single-cell approaches that provide deep insight into cell signaling and fate decisions will be critical to optimizing the next generation of cancer treatments combining targeted approaches and immunotherapy.

One-dimensional energy flow model for poroelastic material

International Nuclear Information System (INIS)

Kim, Jung Soo; Kang, Yeon June

2009-01-01

This paper presents a one-dimensional energy flow model to investigate the energy behavior for poroelastic media coupled with acoustical media. The proposed energy flow model is expressed by an independent energy governing equation that is classified into each wave component propagating in poroelastic media. The energy governing equation is derived using the General Energetic Method (GEM). To facilitate a comparison with the classical solution based on the conventional displacement-base formulation, approximate solutions of energy density and intensity are obtained. Furthermore, the limitations and usability of the proposed energy flow model for poroelastic media are described.

Three-dimensional flow measurements induced from serpentine plasma actuators in quiescent air

International Nuclear Information System (INIS)

Durscher, R J; Roy, S

2012-01-01

This paper presents three-dimensional flow measurements performed on a dielectric barrier discharge (DBD) actuator with the electrodes in a serpentine design. Such a configuration induces a local pinching and a local spreading of the fluid as one follows along the span of the actuator. In this work two different variations on the serpentine configuration are evaluated: one constructed from patterned circular arcs and one from patterned rectangles. The influence of applied voltage is studied for the former case. To quantify these effects stereo particle image velocimetry (PIV) is used to generate time averaged, spatially resolved measurements of the detailed flow structure. The three components of the velocity vector are measured along spanwise and streamwise cuts. These slices are then reconstructed to provide a three-dimensional view of the induced flow field. The results for the induced flow fields are also compared with stereo-PIV measurements made on a standard linear DBD actuator. A truly three-dimensional induced flow field was observed as a result of the serpentine configuration. These designs could be beneficial for rapid mixing of the local fluid. (paper)

Automated structure and flow measurement - a promising tool in nailfold capillaroscopy.

Science.gov (United States)

Berks, Michael; Dinsdale, Graham; Murray, Andrea; Moore, Tonia; Manning, Joanne; Taylor, Chris; Herrick, Ariane L

2018-07-01

Despite increasing interest in nailfold capillaroscopy, objective measures of capillary structure and blood flow have been little studied. We aimed to test the hypothesis that structural measurements, capillary flow, and a combined measure have the predictive power to separate patients with systemic sclerosis (SSc) from those with primary Raynaud's phenomenon (PRP) and healthy controls (HC). 50 patients with SSc, 12 with PRP, and 50 HC were imaged using a novel capillaroscopy system that generates high-quality nailfold images and provides fully-automated measurements of capillary structure and blood flow (capillary density, mean width, maximum width, shape score, derangement and mean flow velocity). Population statistics summarise the differences between the three groups. Areas under ROC curves (A Z ) were used to measure classification accuracy when assigning individuals to SSc and HC/PRP groups. Statistically significant differences in group means were found between patients with SSc and both HC and patients with PRP, for all measurements, e.g. mean width (μm) ± SE: 15.0 ± 0.71, 12.7 ± 0.74 and 11.8 ± 0.23 for SSc, PRP and HC respectively. Combining the five structural measurements gave better classification (A Z  = 0.919 ± 0.026) than the best single measurement (mean width, A Z  = 0.874 ± 0.043), whilst adding flow further improved classification (A Z  = 0.930 ± 0.024). Structural and blood flow measurements are both able to distinguish patients with SSc from those with PRP/HC. Importantly, these hold promise as clinical trial outcome measures for treatments aimed at improving finger blood flow or microvascular remodelling. Copyright © 2018 The Authors. Published by Elsevier Inc. All rights reserved.

Flow predictions for MHD channels with an approximation for three-dimensional effects

International Nuclear Information System (INIS)

Blottner, F.G.

1978-01-01

A finite-difference procedure has been formulated for predicting the flow properties across channels. A quasi-two-dimensional approach has been developed which allows the three-dimensional channel effects to be taken into account. Comparison of the numerical solutions with experimental results show that this approach is a reasonable approximation for MHD flow conditions if there is not significant merging of the wall boundary layers. The resulting code provides a technique to obtain the flow details in the symmetry plane of the channel and requires only a small amount of computer time

Automated flow quantification in valvular heart disease based on backscattered Doppler power analysis: implementation on matrix-array ultrasound imaging systems.

Science.gov (United States)

Buck, Thomas; Hwang, Shawn M; Plicht, Björn; Mucci, Ronald A; Hunold, Peter; Erbel, Raimund; Levine, Robert A

2008-06-01

Cardiac ultrasound imaging systems are limited in the noninvasive quantification of valvular regurgitation due to indirect measurements and inaccurate hemodynamic assumptions. We recently demonstrated that the principle of integration of backscattered acoustic Doppler power times velocity can be used for flow quantification in valvular regurgitation directly at the vena contracta of a regurgitant flow jet. We now aimed to accomplish implementation of automated Doppler power flow analysis software on a standard cardiac ultrasound system utilizing novel matrix-array transducer technology with detailed description of system requirements, components and software contributing to the system. This system based on a 3.5 MHz, matrix-array cardiac ultrasound scanner (Sonos 5500, Philips Medical Systems) was validated by means of comprehensive experimental signal generator trials, in vitro flow phantom trials and in vivo testing in 48 patients with mitral regurgitation of different severity and etiology using magnetic resonance imaging (MRI) for reference. All measurements displayed good correlation to the reference values, indicating successful implementation of automated Doppler power flow analysis on a matrix-array ultrasound imaging system. Systematic underestimation of effective regurgitant orifice areas >0.65 cm(2) and volumes >40 ml was found due to currently limited Doppler beam width that could be readily overcome by the use of new generation 2D matrix-array technology. Automated flow quantification in valvular heart disease based on backscattered Doppler power can be fully implemented on board a routinely used matrix-array ultrasound imaging systems. Such automated Doppler power flow analysis of valvular regurgitant flow directly, noninvasively, and user independent overcomes the practical limitations of current techniques.

Size-sensitive particle trajectories in three-dimensional micro-bubble acoustic streaming flows

Science.gov (United States)

Volk, Andreas; Rossi, Massimiliano; Hilgenfeldt, Sascha; Rallabandi, Bhargav; Kähler, Christian; Marin, Alvaro

2015-11-01

Oscillating microbubbles generate steady streaming flows with interesting features and promising applications for microparticle manipulation. The flow around oscillating semi-cylindrical bubbles has been typically assumed to be independent of the axial coordinate. However, it has been recently revealed that particle motion is strongly three-dimensional: Small tracer particles follow vortical trajectories with pronounced axial displacements near the bubble, weaving a toroidal stream-surface. A well-known consequence of bubble streaming flows is size-dependent particle migration, which can be exploited for sorting and trapping of microparticles in microfluidic devices. In this talk, we will show how the three-dimensional toroidal topology found for small tracer particles is modified as the particle size increases up to 1/3 of the bubble radius. Our results show size-sensitive particle positioning along the axis of the semi-cylindrical bubble. In order to analyze the three-dimensional sorting and trapping capabilities of the system, experiments with an imposed flow and polydisperse particle solutions are also shown.

Extracting quantitative three-dimensional unsteady flow direction from tuft flow visualizations

Energy Technology Data Exchange (ETDEWEB)

Omata, Noriyasu; Shirayama, Susumu, E-mail: omata@nakl.t.u-tokyo.ac.jp, E-mail: sirayama@sys.t.u-tokyo.ac.jp [Department of Systems Innovation, School of Engineering, The University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo, 113-8656 (Japan)

2017-10-15

We focus on the qualitative but widely used method of tuft flow visualization, and propose a method for quantifying it using information technology. By applying stereo image processing and computer vision, the three-dimensional (3D) flow direction in a real environment can be obtained quantitatively. In addition, we show that the flow can be divided temporally by performing appropriate machine learning on the data. Acquisition of flow information in real environments is important for design development, but it is generally considered difficult to apply simulations or quantitative experiments to such environments. Hence, qualitative methods including the tuft method are still in use today. Although attempts have been made previously to quantify such methods, it has not been possible to acquire 3D information. Furthermore, even if quantitative data could be acquired, analysis was often performed empirically or qualitatively. In contrast, we show that our method can acquire 3D information and analyze the measured data quantitatively. (paper)

Extracting quantitative three-dimensional unsteady flow direction from tuft flow visualizations

International Nuclear Information System (INIS)

Omata, Noriyasu; Shirayama, Susumu

2017-01-01

We focus on the qualitative but widely used method of tuft flow visualization, and propose a method for quantifying it using information technology. By applying stereo image processing and computer vision, the three-dimensional (3D) flow direction in a real environment can be obtained quantitatively. In addition, we show that the flow can be divided temporally by performing appropriate machine learning on the data. Acquisition of flow information in real environments is important for design development, but it is generally considered difficult to apply simulations or quantitative experiments to such environments. Hence, qualitative methods including the tuft method are still in use today. Although attempts have been made previously to quantify such methods, it has not been possible to acquire 3D information. Furthermore, even if quantitative data could be acquired, analysis was often performed empirically or qualitatively. In contrast, we show that our method can acquire 3D information and analyze the measured data quantitatively. (paper)

Statistical mechanics of two-dimensional and geophysical flows

International Nuclear Information System (INIS)

Bouchet, Freddy; Venaille, Antoine

2012-01-01

The theoretical study of the self-organization of two-dimensional and geophysical turbulent flows is addressed based on statistical mechanics methods. This review is a self-contained presentation of classical and recent works on this subject; from the statistical mechanics basis of the theory up to applications to Jupiter’s troposphere and ocean vortices and jets. Emphasize has been placed on examples with available analytical treatment in order to favor better understanding of the physics and dynamics. After a brief presentation of the 2D Euler and quasi-geostrophic equations, the specificity of two-dimensional and geophysical turbulence is emphasized. The equilibrium microcanonical measure is built from the Liouville theorem. Important statistical mechanics concepts (large deviations and mean field approach) and thermodynamic concepts (ensemble inequivalence and negative heat capacity) are briefly explained and described. On this theoretical basis, we predict the output of the long time evolution of complex turbulent flows as statistical equilibria. This is applied to make quantitative models of two-dimensional turbulence, the Great Red Spot and other Jovian vortices, ocean jets like the Gulf-Stream, and ocean vortices. A detailed comparison between these statistical equilibria and real flow observations is provided. We also present recent results for non-equilibrium situations, for the studies of either the relaxation towards equilibrium or non-equilibrium steady states. In this last case, forces and dissipation are in a statistical balance; fluxes of conserved quantity characterize the system and microcanonical or other equilibrium measures no longer describe the system.

One- and two-dimensional Stirling machine simulation using experimentally generated reversing flow turbuulence models

International Nuclear Information System (INIS)

Goldberg, L.F.

1990-08-01

The activities described in this report do not constitute a continuum but rather a series of linked smaller investigations in the general area of one- and two-dimensional Stirling machine simulation. The initial impetus for these investigations was the development and construction of the Mechanical Engineering Test Rig (METR) under a grant awarded by NASA to Dr. Terry Simon at the Department of Mechanical Engineering, University of Minnesota. The purpose of the METR is to provide experimental data on oscillating turbulent flows in Stirling machine working fluid flow path components (heater, cooler, regenerator, etc.) with particular emphasis on laminar/turbulent flow transitions. Hence, the initial goals for the grant awarded by NASA were, broadly, to provide computer simulation backup for the design of the METR and to analyze the results produced. This was envisaged in two phases: First, to apply an existing one-dimensional Stirling machine simulation code to the METR and second, to adapt a two-dimensional fluid mechanics code which had been developed for simulating high Rayleigh number buoyant cavity flows to the METR. The key aspect of this latter component was the development of an appropriate turbulence model suitable for generalized application to Stirling simulation. A final-step was then to apply the two-dimensional code to an existing Stirling machine for which adequate experimental data exist. The work described herein was carried out over a period of three years on a part-time basis. Forty percent of the first year's funding was provided as a match to the NASA funds by the Underground Space Center, University of Minnesota, which also made its computing facilities available to the project at no charge

Nearly Interactive Parabolized Navier-Stokes Solver for High Speed Forebody and Inlet Flows

Science.gov (United States)

Benson, Thomas J.; Liou, May-Fun; Jones, William H.; Trefny, Charles J.

2009-01-01

A system of computer programs is being developed for the preliminary design of high speed inlets and forebodies. The system comprises four functions: geometry definition, flow grid generation, flow solver, and graphics post-processor. The system runs on a dedicated personal computer using the Windows operating system and is controlled by graphical user interfaces written in MATLAB (The Mathworks, Inc.). The flow solver uses the Parabolized Navier-Stokes equations to compute millions of mesh points in several minutes. Sample two-dimensional and three-dimensional calculations are demonstrated in the paper.

High-flow priapism in acute lymphatic leukaemia

Energy Technology Data Exchange (ETDEWEB)

Mentzel, Hans-Joachim; Vogt, Susanna; Kaiser, Werner A. [Institute of Diagnostic and Interventional Radiology, Department of Pediatric Radiology, Friedrich-Schiller-Universitaet Jena, Bachstrasse 18, 07740, Jena (Germany); Kentouche, Karim; Doerfel, Claus; Zintl, Felix [Department of Paediatrics, University of Jena (Germany)

2004-07-01

Priapism is defined as prolonged and persistent erection of the penis without sexual stimulation. It is associated with excessive hyperleukocytosis (e.g. in acute or chronic leukaemia); however, this complication is rarely seen in the pediatric population. We report a 12-year-old boy suffering from acute leukaemia presenting with, at first intermittent, but increasingly persistent erection. Doppler US revealed signs of high-flow priapism. MRI excluded intrapelvic tumour masses, and three-dimensional contrast-enhanced MR angiography could not demonstrate an arteriovenous fistula or thrombosis. Cavernosal blood-gas measurement was in agreement with high-flow priapism. On the basis of the imaging findings, invasive therapeutic management was avoided in our patient with a successful outcome. (orig.)

High-flow priapism in acute lymphatic leukaemia

International Nuclear Information System (INIS)

Mentzel, Hans-Joachim; Vogt, Susanna; Kaiser, Werner A.; Kentouche, Karim; Doerfel, Claus; Zintl, Felix

2004-01-01

Priapism is defined as prolonged and persistent erection of the penis without sexual stimulation. It is associated with excessive hyperleukocytosis (e.g. in acute or chronic leukaemia); however, this complication is rarely seen in the pediatric population. We report a 12-year-old boy suffering from acute leukaemia presenting with, at first intermittent, but increasingly persistent erection. Doppler US revealed signs of high-flow priapism. MRI excluded intrapelvic tumour masses, and three-dimensional contrast-enhanced MR angiography could not demonstrate an arteriovenous fistula or thrombosis. Cavernosal blood-gas measurement was in agreement with high-flow priapism. On the basis of the imaging findings, invasive therapeutic management was avoided in our patient with a successful outcome. (orig.)

Automated three-dimensional morphology-based clustering of human erythrocytes with regular shapes: stomatocytes, discocytes, and echinocytes

Science.gov (United States)

Ahmadzadeh, Ezat; Jaferzadeh, Keyvan; Lee, Jieun; Moon, Inkyu

2017-07-01

We present unsupervised clustering methods for automatic grouping of human red blood cells (RBCs) extracted from RBC quantitative phase images obtained by digital holographic microscopy into three RBC clusters with regular shapes, including biconcave, stomatocyte, and sphero-echinocyte. We select some good features related to the RBC profile and morphology, such as RBC average thickness, sphericity coefficient, and mean corpuscular volume, and clustering methods, including density-based spatial clustering applications with noise, k-medoids, and k-means, are applied to the set of morphological features. The clustering results of RBCs using a set of three-dimensional features are compared against a set of two-dimensional features. Our experimental results indicate that by utilizing the introduced set of features, two groups of biconcave RBCs and old RBCs (suffering from the sphero-echinocyte process) can be perfectly clustered. In addition, by increasing the number of clusters, the three RBC types can be effectively clustered in an automated unsupervised manner with high accuracy. The performance evaluation of the clustering techniques reveals that they can assist hematologists in further diagnosis.

A High Performance Pulsatile Pump for Aortic Flow Experiments in 3-Dimensional Models.

Science.gov (United States)

Chaudhury, Rafeed A; Atlasman, Victor; Pathangey, Girish; Pracht, Nicholas; Adrian, Ronald J; Frakes, David H

2016-06-01

Aortic pathologies such as coarctation, dissection, and aneurysm represent a particularly emergent class of cardiovascular diseases. Computational simulations of aortic flows are growing increasingly important as tools for gaining understanding of these pathologies, as well as for planning their surgical repair. In vitro experiments are required to validate the simulations against real world data, and the experiments require a pulsatile flow pump system that can provide physiologic flow conditions characteristic of the aorta. We designed a newly capable piston-based pulsatile flow pump system that can generate high volume flow rates (850 mL/s), replicate physiologic waveforms, and pump high viscosity fluids against large impedances. The system is also compatible with a broad range of fluid types, and is operable in magnetic resonance imaging environments. Performance of the system was validated using image processing-based analysis of piston motion as well as particle image velocimetry. The new system represents a more capable pumping solution for aortic flow experiments than other available designs, and can be manufactured at a relatively low cost.

Automating multistep flow synthesis: approach and challenges in integrating chemistry, machines and logic

Directory of Open Access Journals (Sweden)

Chinmay A. Shukla

2017-05-01

Full Text Available The implementation of automation in the multistep flow synthesis is essential for transforming laboratory-scale chemistry into a reliable industrial process. In this review, we briefly introduce the role of automation based on its application in synthesis viz. auto sampling and inline monitoring, optimization and process control. Subsequently, we have critically reviewed a few multistep flow synthesis and suggested a possible control strategy to be implemented so that it helps to reliably transfer the laboratory-scale synthesis strategy to a pilot scale at its optimum conditions. Due to the vast literature in multistep synthesis, we have classified the literature and have identified the case studies based on few criteria viz. type of reaction, heating methods, processes involving in-line separation units, telescopic synthesis, processes involving in-line quenching and process with the smallest time scale of operation. This classification will cover the broader range in the multistep synthesis literature.

Three-dimensional inviscid analysis of radial-turbine flow and a limited comparison with experimental data

Science.gov (United States)

Choo, Y. K.; Civinskas, K. C.

1985-01-01

The three-dimensional inviscid DENTON code is used to analyze flow through a radial-inflow turbine rotor. Experimental data from the rotor are compared with analytical results obtained by using the code. The experimental data available for comparison are the radial distributions of circumferentially averaged values of absolute flow angle and total pressure downstream of the rotor exit. The computed rotor-exit flow angles are generally underturned relative to the experimental values, which reflect the boundary-layer separation at the trailing edge and the development of wakes downstream of the rotor. The experimental rotor is designed for a higher-than-optimum work factor of 1.126 resulting in a nonoptimum positive incidence and causing a region of rapid flow adjustment and large velocity gradients. For this experimental rotor, the computed radial distribution of rotor-exit to turbine-inlet total pressure ratios are underpredicted due to the errors in the finite-difference approximations in the regions of rapid flow adjustment, and due to using the relatively coarser grids in the middle of the blade region where the flow passage is highly three-dimensional. Additional results obtained from the three-dimensional inviscid computation are also presented, but without comparison due to the lack of experimental data. These include quasi-secondary velocity vectors on cross-channel surfaces, velocity components on the meridional and blade-to-blade surfaces, and blade surface loading diagrams. Computed results show the evolution of a passage vortex and large streamline deviations from the computational streamwise grid lines. Experience gained from applying the code to a radial turbine geometry is also discussed.

Three-dimensional inviscid analysis of radial turbine flow and a limited comparison with experimental data

Science.gov (United States)

Choo, Y. K.; Civinskas, K. C.

1985-01-01

The three-dimensional inviscid DENTON code is used to analyze flow through a radial-inflow turbine rotor. Experimental data from the rotor are compared with analytical results obtained by using the code. The experimental data available for comparison are the radial distributions of circumferentially averaged values of absolute flow angle and total pressure downstream of the rotor exit. The computed rotor-exit flow angles are generally underturned relative to the experimental values, which reflect the boundary-layer separation at the trailing edge and the development of wakes downstream of the rotor. The experimental rotor is designed for a higher-than-optimum work factor of 1.126 resulting in a nonoptimum positive incidence and causing a region of rapid flow adjustment and large velocity gradients. For this experimental rotor, the computed radial distribution of rotor-exit to turbine-inlet total pressure ratios are underpredicted due to the errors in the finite-difference approximations in the regions of rapid flow adjustment, and due to using the relatively coarser grids in the middle of the blade region where the flow passage is highly three-dimensional. Additional results obtained from the three-dimensional inviscid computation are also presented, but without comparison due to the lack of experimental data. These include quasi-secondary velocity vectors on cross-channel surfaces, velocity components on the meridional and blade-to-blade surfaces, and blade surface loading diagrams. Computed results show the evolution of a passage vortex and large streamline deviations from the computational streamwise grid lines. Experience gained from applying the code to a radial turbine geometry is also discussed.

Three-dimensional turbulent swirling flow in a cylinder: Experiments and computations

International Nuclear Information System (INIS)

Gupta, Amit; Kumar, Ranganathan

2007-01-01

Dynamics of the three-dimensional flow in a cyclone with tangential inlet and tangential exit were studied using particle tracking velocimetry (PTV) and a three-dimensional computational model. The PTV technique is described in this paper and appears to be well suited for the current flow situation. The flow was helical in nature and a secondary recirculating flow was observed and well predicted by computations using the RNG k-ε turbulence model. The secondary flow was characterized by a single vortex which circulated around the axis and occupied a large fraction of the cylinder diameter. The locus of the vortex center meandered around the cylinder axis, making one complete revolution for a cylinder aspect ratio of 2. Tangential velocities from both experiments and computations were compared and found to be in good agreement. The general structure of the flow does not vary significantly as the Reynolds number is increased. However, slight changes in all components of velocity and pressure were seen as the inlet velocity is increased. By increasing the inlet aspect ratio it was observed that the vortex meandering changed significantly

Three-dimensional turbulent swirling flow in a cylinder: Experiments and computations

Energy Technology Data Exchange (ETDEWEB)

Gupta, Amit [Department of Mechanical, Materials and Aerospace Engineering, University of Central Florida, Orlando, FL 32816 (United States); Kumar, Ranganathan [Department of Mechanical, Materials and Aerospace Engineering, University of Central Florida, Orlando, FL 32816 (United States)]. E-mail: rnkumar@mail.ucf.edu

2007-04-15

Dynamics of the three-dimensional flow in a cyclone with tangential inlet and tangential exit were studied using particle tracking velocimetry (PTV) and a three-dimensional computational model. The PTV technique is described in this paper and appears to be well suited for the current flow situation. The flow was helical in nature and a secondary recirculating flow was observed and well predicted by computations using the RNG k-{epsilon} turbulence model. The secondary flow was characterized by a single vortex which circulated around the axis and occupied a large fraction of the cylinder diameter. The locus of the vortex center meandered around the cylinder axis, making one complete revolution for a cylinder aspect ratio of 2. Tangential velocities from both experiments and computations were compared and found to be in good agreement. The general structure of the flow does not vary significantly as the Reynolds number is increased. However, slight changes in all components of velocity and pressure were seen as the inlet velocity is increased. By increasing the inlet aspect ratio it was observed that the vortex meandering changed significantly.

Semi-automated analysis of three-dimensional track images

International Nuclear Information System (INIS)

Meesen, G.; Poffijn, A.

2001-01-01

In the past, three-dimensional (3-d) track images in solid state detectors were difficult to obtain. With the introduction of the confocal scanning laser microscope it is now possible to record 3-d track images in a non-destructive way. These 3-d track images can latter be used to measure typical track parameters. Preparing the detectors and recording the 3-d images however is only the first step. The second step in this process is enhancing the image quality by means of deconvolution techniques to obtain the maximum possible resolution. The third step is extracting the typical track parameters. This can be done on-screen by an experienced operator. For large sets of data however, this manual technique is not desirable. This paper will present some techniques to analyse 3-d track data in an automated way by means of image analysis routines. Advanced thresholding techniques guarantee stable results in different recording situations. By using pre-knowledge about the track shape, reliable object identification is obtained. In case of ambiguity, manual intervention is possible

Study on the flow nonuniformity in a high capacity Stirling pulse tube cryocooler

Science.gov (United States)

You, X.; Zhi, X.; Duan, C.; Jiang, X.; Qiu, L.; Li, J.

2017-12-01

High capacity Stirling-type pulse tube cryocoolers (SPTC) have promising applications in high temperature superconductive motor and gas liquefaction. However, with the increase of cooling capacity, its performance deviates from well-accepted one-dimensional model simulation, such as Sage and Regen, mainly due to the strong field nonuniformity. In this study, several flow straighteners placed at both ends of the pulse tube are investigated to improve the flow distribution. A two-dimensional model of the pulse tube based on the computational fluid dynamics (CFD) method has been built to study the flow distribution of the pulse tube with different flow straighteners including copper screens, copper slots, taper transition and taper stainless slot. A SPTC set-up which has more than one hundred Watts cooling power at 80 K has been built and tested. The flow straighteners mentioned above have been applied and tested. The results show that with the best flow straightener the cooling performance of the SPTC can be significantly improved. Both CFD simulation and experiment show that the straighteners have impacts on the flow distribution and the performance of the high capacity SPTC.

Clustering high dimensional data

DEFF Research Database (Denmark)

Assent, Ira

2012-01-01

High-dimensional data, i.e., data described by a large number of attributes, pose specific challenges to clustering. The so-called ‘curse of dimensionality’, coined originally to describe the general increase in complexity of various computational problems as dimensionality increases, is known...... to render traditional clustering algorithms ineffective. The curse of dimensionality, among other effects, means that with increasing number of dimensions, a loss of meaningful differentiation between similar and dissimilar objects is observed. As high-dimensional objects appear almost alike, new approaches...... for clustering are required. Consequently, recent research has focused on developing techniques and clustering algorithms specifically for high-dimensional data. Still, open research issues remain. Clustering is a data mining task devoted to the automatic grouping of data based on mutual similarity. Each cluster...

Subsonic flow past three-dimensional localised heating elements in boundary layers

Energy Technology Data Exchange (ETDEWEB)

Aljohani, A F [Department of Mathematics, Faculty of Science, University of Tabuk (Saudi Arabia); Gajjar, J S B, E-mail: j.gajjar@manchester.ac.uk [School of Mathematics, University of Manchester, Manchester M13 9PL (United Kingdom)

2017-12-15

The problem of subsonic flow past three-dimensional micro-electro-mechanical-type (MEMS-type) heating elements placed on a flat surface, where the MEMS devices have hump-shaped surfaces, is investigated using the triple-deck theory. The compressible Navier–Stokes equations supplemented by the energy equation are considered in the limit when the Reynolds number is large. The dimensions of the MEMS devices considered are such that the flow perturbations are governed by the three-dimensional subsonic triple-deck equations formulated with the aid of method of matched expansions. The linear analysis of these equations is presented and our results provide an insight into how the MEMS heating elements may be used to positively control the local flow properties. (paper)

Novel automated biomarker discovery work flow for urinary peptidomics

DEFF Research Database (Denmark)

Balog, Crina I.; Hensbergen, Paul J.; Derks, Rico

2009-01-01

samples from Schistosoma haematobium-infected individuals to evaluate clinical applicability. RESULTS: The automated RP-SCX sample cleanup and fractionation system exhibits a high qualitative and quantitative reproducibility, with both BSA standards and urine samples. Because of the relatively high...

High-Dimensional Metrics in R

OpenAIRE

Chernozhukov, Victor; Hansen, Chris; Spindler, Martin

2016-01-01

The package High-dimensional Metrics (\\Rpackage{hdm}) is an evolving collection of statistical methods for estimation and quantification of uncertainty in high-dimensional approximately sparse models. It focuses on providing confidence intervals and significance testing for (possibly many) low-dimensional subcomponents of the high-dimensional parameter vector. Efficient estimators and uniformly valid confidence intervals for regression coefficients on target variables (e.g., treatment or poli...

Two-dimensional analysis of motion artifacts, including flow effects

International Nuclear Information System (INIS)

Litt, A.M.; Brody, A.S.; Spangler, R.A.; Scott, P.D.

1990-01-01

The effects of motion on magnetic resonance images have been theoretically analyzed for the case of a point-like object in simple harmonic motion and for other one-dimensional trajectories. The authors of this paper extend this analysis to a generalized two-dimensional magnetization with an arbitrary motion trajectory. The authors provide specific solutions for the clinically relevant cases of the cross-sections of cylindrical objects in the body, such as the aorta, which has a roughly one-dimensional, simple harmonic motion during respiration. By extending the solution to include inhomogeneous magnetizations, the authors present a model which allows the effects of motion artifacts and flow artifacts to be analyzed simultaneously

Digital Three-Dimensional Automation of the Modified Huddart and Bodenham Scoring System for Patients With Cleft Lip and Palate.

Science.gov (United States)

Ma, Xinhui; Martin, Catherine; McIntyre, Grant; Lin, Ping; Mossey, Peter

2017-07-01

The modified Huddart and Bodenham scoring system assesses maxillary arch constriction and surgical outcomes in cleft lip and palate. This project automates modified Huddart and Bodenham scoring using three-dimensional digital models. Development of a novel software tool. The design, construction, development, and testing of the system was carried out at Dundee Dental Hospital. Subjects with cleft lip and palate. A plug-in has been developed using an open three-dimensional development platform: Rhinoceros, version 5 ( http://www.rhino3d.co.uk ). Users select cusps on mandibular and maxillary teeth on three-dimensional digital models. A three-dimensional cubic spline generates a mandibular curve, and a best-fit horizontal mandibular reference plane is produced using a least-squares method. Horizontal distances projected from the shortest three-dimensional distances were subsequently calculated between the maxillary cusps and the mandibular curve to calculate the modified Huddart and Bodenham score. Automatic scoring of digital models using the modified Huddart and Bodenham system produces similar results to manual scoring. By standardizing outcome assessment in cleft care, multicenter comparisons for audit and research can be simplified, allowing centers throughout the world to upload three-dimensional digital models or intraoral scans of the dental arches for remote scoring. Thereafter, these data can feed back into the global database on orofacial clefting as part of the World Health Organization's international collaborative "Global Burden of Disease" research project for craniofacial anomalies. The automated system facilitates quicker and more reliable outcome assessments by minimizing human errors.

Is high automation a dead end? Cutbacks in production overengineering

OpenAIRE

Lay, Gunter; Schirrmeister, Elna

2001-01-01

For quite some time it seemed the trend towards high automation in the wage-intensive German economy showed no signs of slowing down. However, in practice it turns out that more than a third of companies which have chosen automated solutions have not had their expectations fulfilled. Many of these companies have already made reductions in automation levels for particular subsystems. The most important reason for dissatisfaction is the lack of flexibility in highly automated systems. Flexibili...

Investigations on high speed MHD liquid flow

International Nuclear Information System (INIS)

Yamasaki, Takasuke; Kamiyama, Shin-ichi.

1982-01-01

Lately, the pressure drop problem of MHD two-phase flow in a duct has been investigated theoretically and experimentally in conjunction with the problems of liquid metal MHD two-phase flow power-generating cycle or of liquid metal boiling two-phase flow in the blanket of a nuclear fusion reactor. Though many research results have been reported so far for MHD single-phase flow, the hydrodynamic studies on high speed two-phase flow are reported only rarely, specifically the study dealing with the generation of cavitation is not found. In the present investigation, the basic equation was derived, analyzing the high speed MHD liquid flow in a diverging duct as the one-dimensional flow of homogeneous two-phase fluid of small void ratio. Furthermore, the theoretical solution for the effect of magnetic field on cavitation-generating conditions was tried. The pressure distribution in MHD flow in a duct largely varies with load factor, and even if the void ratio is small, the pressure distribution in two-phase flow is considerably different from that in single-phase flow. Even if the MHD two-phase flow in a duct is subsonic flow at the throat, the critical conditions may be achieved sometimes in a diverging duct. It was shown that cavitation is more likely to occur as magnetic field becomes more intense if it is generated downstream of the throat. This explains the experimental results qualitatively. (Wakatsuki, Y.)

Exceptional mobility of an advancing rhyolitic obsidian flow at Cordón Caulle volcano in Chile.

Science.gov (United States)

Tuffen, Hugh; James, Mike R; Castro, Jonathan M; Schipper, C Ian

2013-01-01

The emplacement mechanisms of rhyolitic lava flows are enigmatic and, despite high lava viscosities and low inferred effusion rates, can result in remarkably, laterally extensive (>30 km) flow fields. Here we present the first observations of an active, extensive rhyolitic lava flow field from the 2011-2012 eruption at Cordón Caulle, Chile. We combine high-resolution four-dimensional flow front models, created using automated photo reconstruction techniques, with sequential satellite imagery. Late-stage evolution greatly extended the compound lava flow field, with localized extrusion from stalled, ~35 m-thick flow margins creating >80 breakout lobes. In January 2013, flow front advance continued ~3.6 km from the vent, despite detectable lava supply ceasing 6-8 months earlier. This illustrates how efficient thermal insulation by the lava carapace promotes prolonged within-flow horizontal lava transport, boosting the extent of the flow. The unexpected similarities with compound basaltic lava flow fields point towards a unifying model of lava emplacement.

An analytic, approximate method for modeling steady, three-dimensional flow to partially penetrating wells

Science.gov (United States)

Bakker, Mark

2001-05-01

An analytic, approximate solution is derived for the modeling of three-dimensional flow to partially penetrating wells. The solution is written in terms of a correction on the solution for a fully penetrating well and is obtained by dividing the aquifer up, locally, in a number of aquifer layers. The resulting system of differential equations is solved by application of the theory for multiaquifer flow. The presented approach has three major benefits. First, the solution may be applied to any groundwater model that can simulate flow to a fully penetrating well; the solution may be superimposed onto the solution for the fully penetrating well to simulate the local three-dimensional drawdown and flow field. Second, the approach is applicable to isotropic, anisotropic, and stratified aquifers and to both confined and unconfined flow. Third, the solution extends over a small area around the well only; outside this area the three-dimensional effect of the partially penetrating well is negligible, and no correction to the fully penetrating well is needed. A number of comparisons are made to existing three-dimensional, analytic solutions, including radial confined and unconfined flow and a well in a uniform flow field. It is shown that a subdivision in three layers is accurate for many practical cases; very accurate solutions are obtained with more layers.

Parallel Simulation of Three-Dimensional Free Surface Fluid Flow Problems

International Nuclear Information System (INIS)

BAER, THOMAS A.; SACKINGER, PHILIP A.; SUBIA, SAMUEL R.

1999-01-01

Simulation of viscous three-dimensional fluid flow typically involves a large number of unknowns. When free surfaces are included, the number of unknowns increases dramatically. Consequently, this class of problem is an obvious application of parallel high performance computing. We describe parallel computation of viscous, incompressible, free surface, Newtonian fluid flow problems that include dynamic contact fines. The Galerkin finite element method was used to discretize the fully-coupled governing conservation equations and a ''pseudo-solid'' mesh mapping approach was used to determine the shape of the free surface. In this approach, the finite element mesh is allowed to deform to satisfy quasi-static solid mechanics equations subject to geometric or kinematic constraints on the boundaries. As a result, nodal displacements must be included in the set of unknowns. Other issues discussed are the proper constraints appearing along the dynamic contact line in three dimensions. Issues affecting efficient parallel simulations include problem decomposition to equally distribute computational work among a SPMD computer and determination of robust, scalable preconditioners for the distributed matrix systems that must be solved. Solution continuation strategies important for serial simulations have an enhanced relevance in a parallel coquting environment due to the difficulty of solving large scale systems. Parallel computations will be demonstrated on an example taken from the coating flow industry: flow in the vicinity of a slot coater edge. This is a three dimensional free surface problem possessing a contact line that advances at the web speed in one region but transitions to static behavior in another region. As such, a significant fraction of the computational time is devoted to processing boundary data. Discussion focuses on parallel speed ups for fixed problem size, a class of problems of immediate practical importance

Newtonian heating effects in three-dimensional flow of viscoelastic fluid

International Nuclear Information System (INIS)

Qayyum, A.; Hayat, T.; Alhuthali, M. S.; Malaikah, H. M.

2014-01-01

A mathematical model is constructed to investigate the three-dimensional flow of a non-Newtonian fluid. An incompressible viscoelastic fluid is used in mathematical formulation. The conjugate convective process (in which heat the transfer rate from the bounding surface with a finite capacity is proportional to the local surface temperature) in three-dimensional flow of a differential type of non-Newtonian fluid is analyzed for the first time. Series solutions for the nonlinear differential system are computed. Plots are presented for the description of emerging parameters entering into the problem. It is observed that the conjugate heating phenomenon causes an appreciable increase in the temperature at the stretching wall. (electromagnetism, optics, acoustics, heat transfer, classical mechanics, and fluid dynamics)

Flow and Jamming of Granular Materials in a Two-dimensional Hopper

Science.gov (United States)

Tang, Junyao

Flow in a hopper is both a fertile testing ground for understanding fundamental granular flow rheology and industrially highly relevant. Despite increasing research efforts in this area, a comprehensive physical theory is still lacking for both jamming and flow of granular materials in a hopper. In this work, I have designed a two dimensional (2D) hopper experiment using photoelastic particles (particles' shape: disk or ellipse), with the goal to build a bridge between macroscopic phenomenon of hopper flow and microscopic particle-scale dynamics. Through synchronized data of particle tracking and stress distributions in particles, I have shown differences between my data of the time-averaged velocity/stress profile of 2D hopper flow with previous theoretical predictions. I have also demonstrated the importance of a mechanical stable arch near the opening on controlling hopper flow rheology and suggested a heuristic phase diagram for the hopper flow/jamming transition. Another part of this thesis work is focused on studying the impact of particle shape of particles on hopper flow. By comparing particle-tracking and photoelastic data for ellipses and disks at the appropriate length scale, I have demonstrated an important role for the rotational freedom of elliptical particles in controlling flow rheology through particle tracking and stress analysis. This work has been supported by International Fine Particle Research Institute (IFPRI) .

Examination of a high resolution laser optical plankton counter and FlowCAM for measuring plankton concentration and size

Science.gov (United States)

Kydd, Jocelyn; Rajakaruna, Harshana; Briski, Elizabeta; Bailey, Sarah

2018-03-01

Many commercial ships will soon begin to use treatment systems to manage their ballast water and reduce the global transfer of harmful aquatic organisms and pathogens in accordance with upcoming International Maritime Organization regulations. As a result, rapid and accurate automated methods will be needed to monitoring compliance of ships' ballast water. We examined two automated particle counters for monitoring organisms ≥ 50 μm in minimum dimension: a High Resolution Laser Optical Plankton Counter (HR-LOPC), and a Flow Cytometer with digital imaging Microscope (FlowCAM), in comparison to traditional (manual) microscopy considering plankton concentration, size frequency distributions and particle size measurements. The automated tools tended to underestimate particle concentration compared to standard microscopy, but gave similar results in terms of relative abundance of individual taxa. For most taxa, particle size measurements generated by FlowCAM ABD (Area Based Diameter) were more similar to microscope measurements than were those by FlowCAM ESD (Equivalent Spherical Diameter), though there was a mismatch in size estimates for some organisms between the FlowCAM ABD and microscope due to orientation and complex morphology. When a single problematic taxon is very abundant, the resulting size frequency distribution curves can become skewed, as was observed with Asterionella in this study. In particular, special consideration is needed when utilizing automated tools to analyse samples containing colonial species. Re-analysis of the size frequency distributions with the removal of Asterionella from FlowCAM and microscope data resulted in more similar curves across methods with FlowCAM ABD having the best fit compared to the microscope, although microscope concentration estimates were still significantly higher than estimates from the other methods. The results of our study indicate that both automated tools can generate frequency distributions of particles

Semi-analytical Study of a One-dimensional Contaminant Flow in a ...

African Journals Online (AJOL)

ADOWIE PERE

ABSTRACT: The Bubnov-Galerkin weighted residual method was used to solve a one- dimensional contaminant flow problem in this paper. The governing equation of the contaminant flow, which is characterized by advection, dispersion and adsorption was discretized and solved to obtain the semi-analytical solution.

Autonomy and Automation

Science.gov (United States)

Shively, Jay

2017-01-01

A significant level of debate and confusion has surrounded the meaning of the terms autonomy and automation. Automation is a multi-dimensional concept, and we propose that Remotely Piloted Aircraft Systems (RPAS) automation should be described with reference to the specific system and task that has been automated, the context in which the automation functions, and other relevant dimensions. In this paper, we present definitions of automation, pilot in the loop, pilot on the loop and pilot out of the loop. We further propose that in future, the International Civil Aviation Organization (ICAO) RPAS Panel avoids the use of the terms autonomy and autonomous when referring to automated systems on board RPA. Work Group 7 proposes to develop, in consultation with other workgroups, a taxonomy of Levels of Automation for RPAS.

Driver Response Times when Resuming Manual Control from Highly Automated Driving in Truck Platooning Scenarios.

NARCIS (Netherlands)

Zhang, Bo; Wilschut, Ellen; Willemsen, D.; Martens, Marieke

2017-01-01

Automated platooning of trucks is getting increasing interest for its potentially beneficial effects on fuel consumption, driver workload, traffic flow efficiency and safety. Nevertheless, one major challenge lies in the safe and comfortable transitions of control from the automated system back to

The three-dimensional compressible flow in a radial inflow turbine scroll

Science.gov (United States)

Hamed, A.; Tabakoff, W.; Malak, M.

1984-01-01

This work presents the results of an analytical study and an experimental investigation of the three-dimensional flow in a turbine scroll. The finite element method is used in the iterative numerical solution of the locally linearized governing equations for the three-dimensional velocity potential field. The results of the numerical computations are compared with the experimental measurements in the scroll cross sections, which were obtained using laser Doppler velocimetry and hot wire techniques. The results of the computations show a variation in the flow conditions around the rotor periphery which was found to depend on the scroll geometry.

Automated high speed volume computed tomography for inline quality control

International Nuclear Information System (INIS)

Hanke, R.; Kugel, A.; Troup, P.

2004-01-01

Increasing complexity of innovative products as well as growing requirements on quality and reliability call for more detailed knowledge about internal structures of manufactured components rather by 100 % inspection than just by sampling test. A first-step solution, like radioscopic inline inspection machines, equipped with automated data evaluation software, have become state of the art in the production floor during the last years. However, these machines provide just ordinary two-dimensional information and deliver no volume data e.g. to evaluate exact position or shape of detected defects. One way to solve this problem is the application of X-ray computed tomography (CT). Compared to the performance of the first generation medical scanners (scanning times of many hours), today, modern Volume CT machines for industrial applications need about 5 minutes for a full object scan depending on the object size. Of course, this is still too long to introduce this powerful method into the inline production quality control. In order to gain acceptance, the scanning time including subsequent data evaluation must be decreased significantly and adapted to the manufacturing cycle times. This presentation demonstrates the new technical set up, reconstruction results and the methods for high-speed volume data evaluation of a new fully automated high-speed CT scanner with cycle times below one minute for an object size of less than 15 cm. This will directly create new opportunities in design and construction of more complex objects. (author)

Two-dimensional magnetohydrodynamic equilibria with flow and studies of equilibria fluctuations

International Nuclear Information System (INIS)

Agim, Y.Z.

1989-08-01

A set of reduced ideal MHD equations is derived to investigate equilibria of plasmas with mass flow in general two-dimensional geometry. These equations provide a means of investigating the effects of flow on self-consistent equilibria in a number of new two-dimensional configurations such as helically symmetric configurations with helical axis, which are relevant to stellarators, as well as axisymmetric configurations. It is found that as in the axisymmetric case, general two-dimensional flow equilibria are governed by a second-order quasi-linear partial differential equation for a magnetic flux function, which is coupled to a Bernoulli-type equation for the density. The equation for the magnetic flux function becomes hyperbolic at certain critical flow speeds which follow from its characteristic equation. When the equation is hyperbolic, shock phenomena may exist. As a particular example, unidirectional flow along the lines of symmetry is considered. In this case, the equation mentioned above is always elliptic. An exact solution for the case of helically symmetric unidirectional flow is found and studied to determine flow effects on the magnetic topology. In second part of this thesis, magnetic fluctuations due to the thermally excited MHD waves are investigated using fluid and kinetic models to describe stable, uniform, compressible plasma in the range above the drift wave frequency and below the ion cyclotron frequency. It is shown that the fluid model with resistivity yields spectral densities which are roughly Lorentzian, exhibit equipartition with no apparent cutoff in wavenumber space and a Bohm-type diffusion coefficient. Under certain conditions, the ensuing transport may be comparable to classical values. For a phenomenological cutoff imposed on the spectrum, the typical fluctuating-to-equilibrium magnetic field ratio is found to be of the order of 10 -10

On the One-Dimensional Steady and Unsteady Porous Flow Equation

DEFF Research Database (Denmark)

Andersen, O. H.; Burcharth, H. F.

1995-01-01

Porous flow in coarse granular media is discussed theoretically with special concern given to the variation of the flow resistance with the porosity. For steady state flow, the Navier-Stokes equation is applied as a basis for the derivations. A turbulent flow equation is suggested. Alternative...... derivations based on dimensional analysis and a pipe analogy, respectively, are discussed. For non-steady state flow, the derivations are based on a cylinder/sphere analogy leading to a virtual mass coefficient. For the fully turbulent flow regime, existing experimental data values of the quadratic flow...... resistance coefficients are presented. Moreover, a simple formula for estimation of the turbulent flow coefficient is given. Virtual mass coefficients based on existing data are presented, however, no definite conclusions can be given due to the scarce data available....

Application of Fermat's Principle to Calculation of the Errors of Acoustic Flow-Rate Measurements for a Three-Dimensional Fluid Flow or Gas

Science.gov (United States)

Petrov, A. G.; Shkundin, S. Z.

2018-01-01

Fermat's variational principle is used for derivation of the formula for the time of propagation of a sonic signal between two set points A and B in a steady three-dimensional flow of a fluid or gas. It is shown that the fluid flow changes the time of signal reception by a value proportional to the flow rate independently of the velocity profile. The time difference in the reception of the signals from point B to point A and vice versa is proportional with a high accuracy to the flow rate. It is shown that the relative error of the formula does not exceed the square of the largest Mach number. This makes it possible to measure the flow rate of a fluid or gas with an arbitrary steady subsonic velocity field.

Three-Dimensional Flow Behavior Inside the Submerged Entry Nozzle

Science.gov (United States)

Real-Ramirez, Cesar Augusto; Carvajal-Mariscal, Ignacio; Sanchez-Silva, Florencio; Cervantes-de-la-Torre, Francisco; Diaz-Montes, Jesus; Gonzalez-Trejo, Jesus

2018-05-01

According to various authors, the surface quality of steel depends on the dynamic conditions that occur within the continuous casting mold's upper region. The meniscus, found in that upper region, is where the solidification process begins. The liquid steel is distributed into the mold through a submerged entry nozzle (SEN). In this paper, the dynamic behavior inside the SEN is analyzed by means of physical experiments and numerical simulations. The particle imaging velocimetry technique was used to obtain the vector field in different planes and three-dimensional flow patterns inside the SEN volume. Moreover, large eddy simulation was performed, and the turbulence model results were used to understand the nonlinear flow pattern inside the SEN. Using scaled physical and numerical models, quasi-periodic behavior was observed due to the interaction of two three-dimensional vortices that move inside the SEN lower region located between the exit ports of the nozzle.

TSAR: a program for automatic resonance assignment using 2D cross-sections of high dimensionality, high-resolution spectra

Energy Technology Data Exchange (ETDEWEB)

Zawadzka-Kazimierczuk, Anna; Kozminski, Wiktor [University of Warsaw, Faculty of Chemistry (Poland); Billeter, Martin, E-mail: martin.billeter@chem.gu.se [University of Gothenburg, Biophysics Group, Department of Chemistry and Molecular Biology (Sweden)

2012-09-15

While NMR studies of proteins typically aim at structure, dynamics or interactions, resonance assignments represent in almost all cases the initial step of the analysis. With increasing complexity of the NMR spectra, for example due to decreasing extent of ordered structure, this task often becomes both difficult and time-consuming, and the recording of high-dimensional data with high-resolution may be essential. Random sampling of the evolution time space, combined with sparse multidimensional Fourier transform (SMFT), allows for efficient recording of very high dimensional spectra ({>=}4 dimensions) while maintaining high resolution. However, the nature of this data demands for automation of the assignment process. Here we present the program TSAR (Tool for SMFT-based Assignment of Resonances), which exploits all advantages of SMFT input. Moreover, its flexibility allows to process data from any type of experiments that provide sequential connectivities. The algorithm was tested on several protein samples, including a disordered 81-residue fragment of the {delta} subunit of RNA polymerase from Bacillus subtilis containing various repetitive sequences. For our test examples, TSAR achieves a high percentage of assigned residues without any erroneous assignments.

Asleep at the automated wheel-Sleepiness and fatigue during highly automated driving.

Science.gov (United States)

Vogelpohl, Tobias; Kühn, Matthias; Hummel, Thomas; Vollrath, Mark

2018-03-20

pose a serious hazard in complex take-over situations where situation awareness is required to prepare for threats. Driver fatigue monitoring or controllable distraction through non-driving tasks could be necessary to ensure alertness and availability during highly automated driving. Copyright © 2018 Elsevier Ltd. All rights reserved.

Alternative approach to automated management of load flow in engineering networks considering functional reliability

Directory of Open Access Journals (Sweden)

Ирина Александровна Гавриленко

2016-02-01

Full Text Available The approach to automated management of load flow in engineering networks considering functional reliability was proposed in the article. The improvement of the concept of operational and strategic management of load flow in engineering networks was considered. The verbal statement of the problem for thesis research is defined, namely, the problem of development of information technology for exact calculation of the functional reliability of the network, or the risk of short delivery of purpose-oriented product for consumers

Approximate characteristics for one-dimensional two-phase flows

International Nuclear Information System (INIS)

Sarayloo, A.; Peddleson, J.

1985-01-01

An approximate method for determining the characteristics associated with one-dimensional particulate two-phase flow models is presented. The method is based on iteration and is valid for small particulate volume fractions. The method is applied to several special cases involving incompressible particles suspended in a gas. The influences of certain changes in the physical model are investigated

High-speed cell recognition algorithm for ultrafast flow cytometer imaging system

Science.gov (United States)

Zhao, Wanyue; Wang, Chao; Chen, Hongwei; Chen, Minghua; Yang, Sigang

2018-04-01

An optical time-stretch flow imaging system enables high-throughput examination of cells/particles with unprecedented high speed and resolution. A significant amount of raw image data is produced. A high-speed cell recognition algorithm is, therefore, highly demanded to analyze large amounts of data efficiently. A high-speed cell recognition algorithm consisting of two-stage cascaded detection and Gaussian mixture model (GMM) classification is proposed. The first stage of detection extracts cell regions. The second stage integrates distance transform and the watershed algorithm to separate clustered cells. Finally, the cells detected are classified by GMM. We compared the performance of our algorithm with support vector machine. Results show that our algorithm increases the running speed by over 150% without sacrificing the recognition accuracy. This algorithm provides a promising solution for high-throughput and automated cell imaging and classification in the ultrafast flow cytometer imaging platform.

Automated aberration correction of arbitrary laser modes in high numerical aperture systems.

Science.gov (United States)

Hering, Julian; Waller, Erik H; Von Freymann, Georg

2016-12-12

Controlling the point-spread-function in three-dimensional laser lithography is crucial for fabricating structures with highest definition and resolution. In contrast to microscopy, aberrations have to be physically corrected prior to writing, to create well defined doughnut modes, bottlebeams or multi foci modes. We report on a modified Gerchberg-Saxton algorithm for spatial-light-modulator based automated aberration compensation to optimize arbitrary laser-modes in a high numerical aperture system. Using circularly polarized light for the measurement and first-guess initial conditions for amplitude and phase of the pupil function our scalar approach outperforms recent algorithms with vectorial corrections. Besides laser lithography also applications like optical tweezers and microscopy might benefit from the method presented.

Three Dimensional Steady Subsonic Euler Flows in Bounded Nozzles

OpenAIRE

Chen, Chao; Xie, Chunjing

2013-01-01

In this paper, we study the existence and uniqueness of three dimensional steady Euler flows in rectangular nozzles when prescribing normal component of momentum at both the entrance and exit. If, in addition, the normal component of the voriticity and the variation of Bernoulli's function at the exit are both zero, then there exists a unique subsonic potential flow when the magnitude of the normal component of the momentum is less than a critical number. As the magnitude of the normal compon...

Three-Dimensional Adjustment of Stratified Flow Over a Sloping Bottom

National Research Council Canada - National Science Library

Chapman, David

2002-01-01

This study focused on understanding how advection of density within the bottom boundary layer influence the three-dimensional structure, evolution, and dynamics of both the bottom boundary layer and the overlying (interior) flow...

An efficient semi-implicit method for three-dimensional non-hydrostatic flows in compliant arterial vessels.

Science.gov (United States)

Fambri, Francesco; Dumbser, Michael; Casulli, Vincenzo

2014-11-01

Blood flow in arterial systems can be described by the three-dimensional Navier-Stokes equations within a time-dependent spatial domain that accounts for the elasticity of the arterial walls. In this article, blood is treated as an incompressible Newtonian fluid that flows through compliant vessels of general cross section. A three-dimensional semi-implicit finite difference and finite volume model is derived so that numerical stability is obtained at a low computational cost on a staggered grid. The key idea of the method consists in a splitting of the pressure into a hydrostatic and a non-hydrostatic part, where first a small quasi-one-dimensional nonlinear system is solved for the hydrostatic pressure and only in a second step the fully three-dimensional non-hydrostatic pressure is computed from a three-dimensional nonlinear system as a correction to the hydrostatic one. The resulting algorithm is robust, efficient, locally and globally mass conservative, and applies to hydrostatic and non-hydrostatic flows in one, two and three space dimensions. These features are illustrated on nontrivial test cases for flows in tubes with circular or elliptical cross section where the exact analytical solution is known. Test cases of steady and pulsatile flows in uniformly curved rigid and elastic tubes are presented. Wherever possible, axial velocity development and secondary flows are shown and compared with previously published results. Copyright © 2014 John Wiley & Sons, Ltd.

GIS-based two-dimensional numerical simulation of rainfall-induced debris flow

Directory of Open Access Journals (Sweden)

C. Wang

2008-02-01

Full Text Available This paper aims to present a useful numerical method to simulate the propagation and deposition of debris flow across the three dimensional complex terrain. A depth-averaged two-dimensional numerical model is developed, in which the debris and water mixture is assumed to be continuous, incompressible, unsteady flow. The model is based on the continuity equations and Navier-Stokes equations. Raster grid networks of digital elevation model in GIS provide a uniform grid system to describe complex topography. As the raster grid can be used as the finite difference mesh, the continuity and momentum equations are solved numerically using the finite difference method. The numerical model is applied to simulate the rainfall-induced debris flow occurred in 20 July 2003, in Minamata City of southern Kyushu, Japan. The simulation reproduces the propagation and deposition and the results are in good agreement with the field investigation. The synthesis of numerical method and GIS makes possible the solution of debris flow over a realistic terrain, and can be used to estimate the flow range, and to define potentially hazardous areas for homes and road section.

Development of a Three-Dimensional Unstructured Euler Solver for High-Speed Flows

Directory of Open Access Journals (Sweden)

Tudorel Petronel AFILIPOAE

2015-12-01

Full Text Available This paper addresses the solution of the compressible Euler equations on hexahedral meshes for supersonic and hypersonic flows. Spatial discretization is accomplished by a cell-centered finite-volume formulation which employs two different upwind schemes for the computation of convective fluxes. Second-order solutions are attained through a linear state reconstruction technique that yields highly resolved flows in smooth regions while providing a sharp and clean resolution of shocks. The solution gradients required for the higher-order spatial discretization are estimated by a least-square method while Venkatakrishnan limiter is employed to preserve monotonicity and avoid oscillations in the presence of shocks. Furthermore, solutions are advanced in time by an explicit third-order Runge-Kutta scheme and convergence to steady state is accelerated using implicit residual smoothing. Flow around a circular arc in a channel and flow past a circular cylinder are studied and results are presented for various Mach numbers together with comparisons to theoretical and experimental data where possible.

Sensitivity of hemozoin detection by automated flow cytometry in non- and semi-immune malaria patients

NARCIS (Netherlands)

Grobusch, Martin P.; Hänscheid, Thomas; Krämer, Benedikt; Neukammer, Jörg; May, Jürgen; Seybold, Joachim; Kun, Jürgen F. J.; Suttorp, Norbert

2003-01-01

BACKGROUND: Cell-Dyn automated blood cell analyzers use laser flow cytometry technology, allowing detection of malaria pigment (hemozoin) in monocytes. We evaluated the value of such an instrument to diagnose malaria in febrile travelers returning to Berlin, Germany, the relation between the

Automated Microfluidic Platform for Serial Polymerase Chain Reaction and High-Resolution Melting Analysis.

Science.gov (United States)

Cao, Weidong; Bean, Brian; Corey, Scott; Coursey, Johnathan S; Hasson, Kenton C; Inoue, Hiroshi; Isano, Taisuke; Kanderian, Sami; Lane, Ben; Liang, Hongye; Murphy, Brian; Owen, Greg; Shinoda, Nobuhiko; Zeng, Shulin; Knight, Ivor T

2016-06-01

We report the development of an automated genetic analyzer for human sample testing based on microfluidic rapid polymerase chain reaction (PCR) with high-resolution melting analysis (HRMA). The integrated DNA microfluidic cartridge was used on a platform designed with a robotic pipettor system that works by sequentially picking up different test solutions from a 384-well plate, mixing them in the tips, and delivering mixed fluids to the DNA cartridge. A novel image feedback flow control system based on a Canon 5D Mark II digital camera was developed for controlling fluid movement through a complex microfluidic branching network without the use of valves. The same camera was used for measuring the high-resolution melt curve of DNA amplicons that were generated in the microfluidic chip. Owing to fast heating and cooling as well as sensitive temperature measurement in the microfluidic channels, the time frame for PCR and HRMA was dramatically reduced from hours to minutes. Preliminary testing results demonstrated that rapid serial PCR and HRMA are possible while still achieving high data quality that is suitable for human sample testing. © 2015 Society for Laboratory Automation and Screening.

Hydrogen peroxide stabilization in one-dimensional flow columns

Science.gov (United States)

Schmidt, Jeremy T.; Ahmad, Mushtaque; Teel, Amy L.; Watts, Richard J.

2011-09-01

Rapid hydrogen peroxide decomposition is the primary limitation of catalyzed H 2O 2 propagations in situ chemical oxidation (CHP ISCO) remediation of the subsurface. Two stabilizers of hydrogen peroxide, citrate and phytate, were investigated for their effectiveness in one-dimensional columns of iron oxide-coated and manganese oxide-coated sand. Hydrogen peroxide (5%) with and without 25 mM citrate or phytate was applied to the columns and samples were collected at 8 ports spaced 13 cm apart. Citrate was not an effective stabilizer for hydrogen peroxide in iron-coated sand; however, phytate was highly effective, increasing hydrogen peroxide residuals two orders of magnitude over unstabilized hydrogen peroxide. Both citrate and phytate were effective stabilizers for manganese-coated sand, increasing hydrogen peroxide residuals by four-fold over unstabilized hydrogen peroxide. Phytate and citrate did not degrade and were not retarded in the sand columns; furthermore, the addition of the stabilizers increased column flow rates relative to unstabilized columns. These results demonstrate that citrate and phytate are effective stabilizers of hydrogen peroxide under the dynamic conditions of one-dimensional columns, and suggest that citrate and phytate can be added to hydrogen peroxide before injection to the subsurface as an effective means for increasing the radius of influence of CHP ISCO.

Three-dimensional numerical simulations of turbulent cavitating flow in a rectangular channel

Science.gov (United States)

Iben, Uwe; Makhnov, Andrei; Schmidt, Alexander

2018-05-01

Cavitation is a phenomenon of formation of bubbles (cavities) in liquid as a result of pressure drop. Cavitation plays an important role in a wide range of applications. For example, cavitation is one of the key problems of design and manufacturing of pumps, hydraulic turbines, ship's propellers, etc. Special attention is paid to cavitation erosion and to performance degradation of hydraulic devices (noise, fluctuations of the mass flow rate, etc.) caused by the formation of a two-phase system with an increased compressibility. Therefore, development of a model to predict cavitation inception and collapse of cavities in high-speed turbulent flows is an important fundamental and applied task. To test the algorithm three-dimensional simulations of turbulent flow of a cavitating liquid in a rectangular channel have been conducted. The obtained results demonstrate the efficiency and robustness of the formulated model and the algorithm.

Mobile home automation-merging mobile value added services and home automation technologies

OpenAIRE

Rosendahl, Andreas; Hampe, Felix J.; Botterweck, Goetz

2007-01-01

non-peer-reviewed In this paper we study mobile home automation, a field that emerges from an integration of mobile application platforms and home automation technologies. In a conceptual introduction we first illustrate the need for such applications by introducing a two-dimensional conceptual model of mobility. Subsequently we suggest an architecture and discuss different options of how a user might access a mobile home automation service and the controlled devices. As another contrib...

Automation in biological crystallization.

Science.gov (United States)

Stewart, Patrick Shaw; Mueller-Dieckmann, Jochen

2014-06-01

Crystallization remains the bottleneck in the crystallographic process leading from a gene to a three-dimensional model of the encoded protein or RNA. Automation of the individual steps of a crystallization experiment, from the preparation of crystallization cocktails for initial or optimization screens to the imaging of the experiments, has been the response to address this issue. Today, large high-throughput crystallization facilities, many of them open to the general user community, are capable of setting up thousands of crystallization trials per day. It is thus possible to test multiple constructs of each target for their ability to form crystals on a production-line basis. This has improved success rates and made crystallization much more convenient. High-throughput crystallization, however, cannot relieve users of the task of producing samples of high quality. Moreover, the time gained from eliminating manual preparations must now be invested in the careful evaluation of the increased number of experiments. The latter requires a sophisticated data and laboratory information-management system. A review of the current state of automation at the individual steps of crystallization with specific attention to the automation of optimization is given.

Advanced numerical methods for three dimensional two-phase flow calculations

Energy Technology Data Exchange (ETDEWEB)

Toumi, I. [Laboratoire d`Etudes Thermiques des Reacteurs, Gif sur Yvette (France); Caruge, D. [Institut de Protection et de Surete Nucleaire, Fontenay aux Roses (France)

1997-07-01

This paper is devoted to new numerical methods developed for both one and three dimensional two-phase flow calculations. These methods are finite volume numerical methods and are based on the use of Approximate Riemann Solvers concepts to define convective fluxes versus mean cell quantities. The first part of the paper presents the numerical method for a one dimensional hyperbolic two-fluid model including differential terms as added mass and interface pressure. This numerical solution scheme makes use of the Riemann problem solution to define backward and forward differencing to approximate spatial derivatives. The construction of this approximate Riemann solver uses an extension of Roe`s method that has been successfully used to solve gas dynamic equations. As far as the two-fluid model is hyperbolic, this numerical method seems very efficient for the numerical solution of two-phase flow problems. The scheme was applied both to shock tube problems and to standard tests for two-fluid computer codes. The second part describes the numerical method in the three dimensional case. The authors discuss also some improvements performed to obtain a fully implicit solution method that provides fast running steady state calculations. Such a scheme is not implemented in a thermal-hydraulic computer code devoted to 3-D steady-state and transient computations. Some results obtained for Pressurised Water Reactors concerning upper plenum calculations and a steady state flow in the core with rod bow effect evaluation are presented. In practice these new numerical methods have proved to be stable on non staggered grids and capable of generating accurate non oscillating solutions for two-phase flow calculations.

Advanced numerical methods for three dimensional two-phase flow calculations

International Nuclear Information System (INIS)

Toumi, I.; Caruge, D.

1997-01-01

This paper is devoted to new numerical methods developed for both one and three dimensional two-phase flow calculations. These methods are finite volume numerical methods and are based on the use of Approximate Riemann Solvers concepts to define convective fluxes versus mean cell quantities. The first part of the paper presents the numerical method for a one dimensional hyperbolic two-fluid model including differential terms as added mass and interface pressure. This numerical solution scheme makes use of the Riemann problem solution to define backward and forward differencing to approximate spatial derivatives. The construction of this approximate Riemann solver uses an extension of Roe's method that has been successfully used to solve gas dynamic equations. As far as the two-fluid model is hyperbolic, this numerical method seems very efficient for the numerical solution of two-phase flow problems. The scheme was applied both to shock tube problems and to standard tests for two-fluid computer codes. The second part describes the numerical method in the three dimensional case. The authors discuss also some improvements performed to obtain a fully implicit solution method that provides fast running steady state calculations. Such a scheme is not implemented in a thermal-hydraulic computer code devoted to 3-D steady-state and transient computations. Some results obtained for Pressurised Water Reactors concerning upper plenum calculations and a steady state flow in the core with rod bow effect evaluation are presented. In practice these new numerical methods have proved to be stable on non staggered grids and capable of generating accurate non oscillating solutions for two-phase flow calculations

Computation of high Reynolds number internal/external flows

International Nuclear Information System (INIS)

Cline, M.C.; Wilmoth, R.G.

1981-01-01

A general, user oriented computer program, called VNAP2, has been developed to calculate high Reynolds number, internal/external flows. VNAP2 solves the two-dimensional, time-dependent Navier-Stokes equations. The turbulence is modeled with either a mixing-length, a one transport equation, or a two transport equation model. Interior grid points are computed using the explicit MacCormack scheme with special procedures to speed up the calculation in the fine grid. All boundary conditions are calculated using a reference plane characteristic scheme with the viscous terms treated as source terms. Several internal, external, and internal/external flow calculations are presented

Computation of high Reynolds number internal/external flows

Science.gov (United States)

Cline, M. C.; Wilmoth, R. G.

1981-01-01

A general, user oriented computer program, called VNAP2, was developed to calculate high Reynolds number, internal/ external flows. The VNAP2 program solves the two dimensional, time dependent Navier-Stokes equations. The turbulence is modeled with either a mixing-length, a one transport equation, or a two transport equation model. Interior grid points are computed using the explicit MacCormack Scheme with special procedures to speed up the calculation in the fine grid. All boundary conditions are calculated using a reference plane characteristic scheme with the viscous terms treated as source terms. Several internal, external, and internal/external flow calculations are presented.

Calculation of three-dimensional fluid flow with multiple free surfaces

International Nuclear Information System (INIS)

Vander Vorst, M.J.; Chan, R.K.C.

1978-01-01

This paper presents a method for computing incompressible fluid flows with multiple free surfaces which are not restricted in their orientation. The method is presented in the context of the three-dimensional flow in a Mark I reactor pressure suppression system immediately following a postulated loss of coolant accident. The assumption of potential flow is made. The numerical method is a mixed Eulerian-Lagrangian formulation with the interior treated as Eulerian and the free surfaces as Lagrangian. The accuracy of solution hinges on the careful treatment of two important aspects. First, the Laplace equation for the potential is solved at interior points of the Eulerian finite difference mesh using a three-dimensional ''irregular star'' so that boundary conditions can be imposed at the exact position of the free surface. Second, the Lagrangian free surfaces are composed of triangular elements, upon each vertex of which is applied the fully nonlinear Bernoulli equation. One result of these calculations is the transient load on the suppression vessel during the vent clearing and bubble formation events of a loss of coolant accident

Nanoparticle-based assays in automated flow systems: A review

Energy Technology Data Exchange (ETDEWEB)

Passos, Marieta L.C. [LAQV, REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua Jorge Viterbo Ferreira, n° 228, 4050-313 Porto (Portugal); Pinto, Paula C.A.G., E-mail: ppinto@ff.up.pt [LAQV, REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua Jorge Viterbo Ferreira, n° 228, 4050-313 Porto (Portugal); Santos, João L.M., E-mail: joaolms@ff.up.pt [LAQV, REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua Jorge Viterbo Ferreira, n° 228, 4050-313 Porto (Portugal); Saraiva, M. Lúcia M.F.S., E-mail: lsaraiva@ff.up.pt [LAQV, REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua Jorge Viterbo Ferreira, n° 228, 4050-313 Porto (Portugal); Araujo, André R.T.S. [LAQV, REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua Jorge Viterbo Ferreira, n° 228, 4050-313 Porto (Portugal); Unidade de Investigação para o Desenvolvimento do Interior, Instituto Politécnico da Guarda, Av. Dr. Francisco de Sá Carneiro, n° 50, 6300-559 Guarda (Portugal)

2015-08-19

Nanoparticles (NPs) exhibit a number of distinctive and entrancing properties that explain their ever increasing application in analytical chemistry, mainly as chemosensors, signaling tags, catalysts, analytical signal enhancers, reactive species generators, analyte recognition and scavenging/separation entities. The prospect of associating NPs with automated flow-based analytical is undoubtedly a challenging perspective as it would permit confined, cost-effective and reliable analysis, within a shorter timeframe, while exploiting the features of NPs. This article aims at examining state-of-the-art on continuous flow analysis and microfluidic approaches involving NPs such as noble metals (gold and silver), magnetic materials, carbon, silica or quantum dots. Emphasis is devoted to NP format, main practical achievements and fields of application. In this context, the functionalization of NPs with distinct chemical species and ligands is debated in what concerns the motivations and strengths of developed approaches. The utilization of NPs to improve detector's performance in electrochemical application is out of the scope of this review. The works discussed in this review were published in the period of time comprised between the years 2000 and 2013. - Highlights: • The state of the art of flowing stream systems comprising NPs was reviewed. • The use of different types of nanoparticles in each flow technique is discussed. • The most expressive and profitable applications are summarized. • The main conclusions and future perspectives were compiled in the final section.

Nanoparticle-based assays in automated flow systems: A review

International Nuclear Information System (INIS)

Passos, Marieta L.C.; Pinto, Paula C.A.G.; Santos, João L.M.; Saraiva, M. Lúcia M.F.S.; Araujo, André R.T.S.

2015-01-01

Nanoparticles (NPs) exhibit a number of distinctive and entrancing properties that explain their ever increasing application in analytical chemistry, mainly as chemosensors, signaling tags, catalysts, analytical signal enhancers, reactive species generators, analyte recognition and scavenging/separation entities. The prospect of associating NPs with automated flow-based analytical is undoubtedly a challenging perspective as it would permit confined, cost-effective and reliable analysis, within a shorter timeframe, while exploiting the features of NPs. This article aims at examining state-of-the-art on continuous flow analysis and microfluidic approaches involving NPs such as noble metals (gold and silver), magnetic materials, carbon, silica or quantum dots. Emphasis is devoted to NP format, main practical achievements and fields of application. In this context, the functionalization of NPs with distinct chemical species and ligands is debated in what concerns the motivations and strengths of developed approaches. The utilization of NPs to improve detector's performance in electrochemical application is out of the scope of this review. The works discussed in this review were published in the period of time comprised between the years 2000 and 2013. - Highlights: • The state of the art of flowing stream systems comprising NPs was reviewed. • The use of different types of nanoparticles in each flow technique is discussed. • The most expressive and profitable applications are summarized. • The main conclusions and future perspectives were compiled in the final section

A microfluidics-based technique for automated and rapid labeling of cells for flow cytometry

International Nuclear Information System (INIS)

Patibandla, Phani K; Estrada, Rosendo; Kannan, Manasaa; Sethu, Palaniappan

2014-01-01

Flow cytometry is a powerful technique capable of simultaneous multi-parametric analysis of heterogeneous cell populations for research and clinical applications. In recent years, the flow cytometer has been miniaturized and made portable for application in clinical- and resource-limited settings. The sample preparation procedure, i.e. labeling of cells with antibodies conjugated to fluorescent labels, is a time consuming (∼45 min) and labor-intensive procedure. Microfluidics provides enabling technologies to accomplish rapid and automated sample preparation. Using an integrated microfluidic device consisting of a labeling and washing module, we demonstrate a new protocol that can eliminate sample handling and accomplish sample and reagent metering, high-efficiency mixing, labeling and washing in rapid automated fashion. The labeling module consists of a long microfluidic channel with an integrated chaotic mixer. Samples and reagents are precisely metered into this device to accomplish rapid and high-efficiency mixing. The mixed sample and reagents are collected in a holding syringe and held for up to 8 min following which the mixture is introduced into an inertial washing module to obtain ‘analysis-ready’ samples. The washing module consists of a high aspect ratio channel capable of focusing cells to equilibrium positions close to the channel walls. By introducing the cells and labeling reagents in a narrow stream at the center of the channel flanked on both sides by a wash buffer, the elution of cells into the wash buffer away from the free unbound antibodies is accomplished. After initial calibration experiments to determine appropriate ‘holding time’ to allow antibody binding, both modules were used in conjunction to label MOLT-3 cells (T lymphoblast cell line) with three different antibodies simultaneously. Results confirm no significant difference in mean fluorescence intensity values for all three antibodies labels (p < 0.01) between the

Three Dimensional Simulations of Multiphase Flows Using a Lattice Boltzmann Method Suitable for High Density Ratios - 12126

Energy Technology Data Exchange (ETDEWEB)

Gokaltun, Seckin; McDaniel, Dwayne; Roelant, David [Applied Research Center, Florida International University, 10555 West Flagler Street, Suite 2100, Miami, FL 33174 (United States)

2012-07-01

Multiphase flows involving gas and liquid phases can be observed in engineering operations at various Department of Energy sites, such as mixing of slurries using pulsed-air mixers and hydrogen gas generation in liquid waste tanks etc. The dynamics of the gas phase in the liquid domain play an important role in the mixing effectiveness of the pulsed-air mixers or in the level of gas pressure build-up in waste tanks. To understand such effects, computational fluid dynamics methods (CFD) can be utilized by developing a three-dimensional computerized multiphase flow model that can predict accurately the behavior of gas motion inside liquid-filled tanks by solving the governing mathematical equations that represent the physics of the phenomena. In this paper, such a CFD method, lattice Boltzmann method (LBM), is presented that can model multiphase flows accurately and efficiently. LBM is favored over traditional Navier-Stokes based computational models since interfacial forces are handled more effectively in LBM. The LBM is easier to program, more efficient to solve on parallel computers, and has the ability to capture the interface between different fluid phases intrinsically. The LBM used in this paper can solve for the incompressible and viscous flow field in three dimensions, while at the same time, solve the Cahn-Hillard equation to track the position of the gas-liquid interface specifically when the density and viscosity ratios between the two fluids are high. This feature is of primary importance since the previous LBM models proposed for multiphase flows become unstable when the density ratio is larger than 10. The ability to provide stable and accurate simulations at large density ratios becomes important when the simulation case involves fluids such as air and water with a density ratio around 1000 that are common to many engineering problems. In order to demonstrate the capability of the 3D LBM method at high density ratios, a static bubble simulation is

Automated monosegmented flow analyser. Determination of glucose, creatinine and urea.

Science.gov (United States)

Raimundo Júnior, I M; Pasquini, C

1997-10-01

An automated monosegmented flow analyser containing a sampling valve and a reagent addition module and employing a laboratory-made photodiode array spectrophotometer as detection system is described. The instrument was controlled by a 386SX IBM compatible microcomputer through an IC8255 parallel port that communicates with the interface which controls the sampling valve and reagent addition module. The spectrophotometer was controlled by the same microcomputer through an RS232 serial standard interface. The software for the instrument was written in QuickBasic 4.5. Opto-switches were employed to detect the air bubbles limiting the monosegment, allowing precise sample localisation for reagent addition and signal reading. The main characteristics of the analyser are low reagent consumption and high sensitivity which is independent of the sample volume. The instrument was designed to determine glucose, creatinine or urea in blood plasma and serum without hardware modification. The results were compared against those obtained by the Clinical Hospital of UNICAMP using commercial analysers. Correlation coefficients among the methods were 0.997, 0.982 and 0.996 for glucose, creatinine and urea, respectively.

Scalable Nearest Neighbor Algorithms for High Dimensional Data.

Science.gov (United States)

Muja, Marius; Lowe, David G

2014-11-01

For many computer vision and machine learning problems, large training sets are key for good performance. However, the most computationally expensive part of many computer vision and machine learning algorithms consists of finding nearest neighbor matches to high dimensional vectors that represent the training data. We propose new algorithms for approximate nearest neighbor matching and evaluate and compare them with previous algorithms. For matching high dimensional features, we find two algorithms to be the most efficient: the randomized k-d forest and a new algorithm proposed in this paper, the priority search k-means tree. We also propose a new algorithm for matching binary features by searching multiple hierarchical clustering trees and show it outperforms methods typically used in the literature. We show that the optimal nearest neighbor algorithm and its parameters depend on the data set characteristics and describe an automated configuration procedure for finding the best algorithm to search a particular data set. In order to scale to very large data sets that would otherwise not fit in the memory of a single machine, we propose a distributed nearest neighbor matching framework that can be used with any of the algorithms described in the paper. All this research has been released as an open source library called fast library for approximate nearest neighbors (FLANN), which has been incorporated into OpenCV and is now one of the most popular libraries for nearest neighbor matching.

Characterization of coherent structures in three-dimensional turbulent flows using the finite-size Lyapunov exponent

International Nuclear Information System (INIS)

Bettencourt, João H; López, Cristóbal; Hernández-García, Emilio

2013-01-01

In this paper, we use the finite-size Lyapunov exponent (FSLE) to characterize Lagrangian coherent structures in three-dimensional (3D) turbulent flows. Lagrangian coherent structures act as the organizers of transport in fluid flows and are crucial to understand their stirring and mixing properties. Generalized maxima (ridges) of the FSLE fields are used to locate these coherent structures. 3D FSLE fields are calculated in two phenomenologically distinct turbulent flows: a wall-bounded flow (channel flow) and a regional oceanic flow obtained by the numerical solution of the primitive equations where two-dimensional (2D) turbulence dominates. In the channel flow, autocorrelations of the FSLE field show that the structure is substantially different from the near wall to the mid-channel region and relates well to the more widely studied Eulerian coherent structure of the turbulent channel flow. The ridges of the FSLE field have complex shapes due to the 3D character of the turbulent fluctuations. In the oceanic flow, strong horizontal stirring is present and the flow regime is similar to that of 2D turbulence where the domain is populated by coherent eddies that interact strongly. This in turn results in the presence of high FSLE lines throughout the domain leading to strong non-local mixing. The ridges of the FSLE field are quasi-vertical surfaces, indicating that the horizontal dynamics dominates the flow. Indeed, due to rotation and stratification, vertical motions in the ocean are much less intense than horizontal ones. This suppression is absent in the channel flow, as the 3D character of the FSLE ridges shows. This article is part of a special issue of Journal of Physics A: Mathematical and Theoretical devoted to ‘Lyapunov analysis: from dynamical systems theory to applications’. (paper)

Shell-crossing in quasi-one-dimensional flow

Science.gov (United States)

Rampf, Cornelius; Frisch, Uriel

2017-10-01

Blow-up of solutions for the cosmological fluid equations, often dubbed shell-crossing or orbit crossing, denotes the breakdown of the single-stream regime of the cold-dark-matter fluid. At this instant, the velocity becomes multi-valued and the density singular. Shell-crossing is well understood in one dimension (1D), but not in higher dimensions. This paper is about quasi-one-dimensional (Q1D) flow that depends on all three coordinates but differs only slightly from a strictly 1D flow, thereby allowing a perturbative treatment of shell-crossing using the Euler-Poisson equations written in Lagrangian coordinates. The signature of shell-crossing is then just the vanishing of the Jacobian of the Lagrangian map, a regular perturbation problem. In essence, the problem of the first shell-crossing, which is highly singular in Eulerian coordinates, has been desingularized by switching to Lagrangian coordinates, and can then be handled by perturbation theory. Here, all-order recursion relations are obtained for the time-Taylor coefficients of the displacement field, and it is shown that the Taylor series has an infinite radius of convergence. This allows the determination of the time and location of the first shell-crossing, which is generically shown to be taking place earlier than for the unperturbed 1D flow. The time variable used for these statements is not the cosmic time t but the linear growth time τ ˜ t2/3. For simplicity, calculations are restricted to an Einstein-de Sitter universe in the Newtonian approximation, and tailored initial data are used. However it is straightforward to relax these limitations, if needed.

CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets [version 1; referees: 2 approved

Directory of Open Access Journals (Sweden)

Malgorzata Nowicka

2017-05-01

Full Text Available High dimensional mass and flow cytometry (HDCyto experiments have become a method of choice for high throughput interrogation and characterization of cell populations.Here, we present an R-based pipeline for differential analyses of HDCyto data, largely based on Bioconductor packages. We computationally define cell populations using FlowSOM clustering, and facilitate an optional but reproducible strategy for manual merging of algorithm-generated clusters. Our workflow offers different analysis paths, including association of cell type abundance with a phenotype or changes in signaling markers within specific subpopulations, or differential analyses of aggregated signals. Importantly, the differential analyses we show are based on regression frameworks where the HDCyto data is the response; thus, we are able to model arbitrary experimental designs, such as those with batch effects, paired designs and so on. In particular, we apply generalized linear mixed models to analyses of cell population abundance or cell-population-specific analyses of signaling markers, allowing overdispersion in cell count or aggregated signals across samples to be appropriately modeled. To support the formal statistical analyses, we encourage exploratory data analysis at every step, including quality control (e.g. multi-dimensional scaling plots, reporting of clustering results (dimensionality reduction, heatmaps with dendrograms and differential analyses (e.g. plots of aggregated signals.

Experiment of flow regime map and local condensing heat transfer coefficients inside three dimensional inner microfin tubes

Science.gov (United States)

Du, Yang; Xin, Ming Dao

1999-03-01

This paper developed a new type of three dimensional inner microfin tube. The experimental results of the flow patterns for the horizontal condensation inside these tubes are reported in the paper. The flow patterns for the horizontal condensation inside the new made tubes are divided into annular flow, stratified flow and intermittent flow within the test conditions. The experiments of the local heat transfer coefficients for the different flow patterns have been systematically carried out. The experiments of the local heat transfer coefficients changing with the vapor dryness fraction have also been carried out. As compared with the heat transfer coefficients of the two dimensional inner microfin tubes, those of the three dimensional inner microfin tubes increase 47-127% for the annular flow region, 38-183% for the stratified flow and 15-75% for the intermittent flow, respectively. The enhancement factor of the local heat transfer coefficients is from 1.8-6.9 for the vapor dryness fraction from 0.05 to 1.

Multi-dimensional two-fluid flow computation. An overview

International Nuclear Information System (INIS)

Carver, M.B.

1992-01-01

This paper discusses a repertoire of three-dimensional computer programs developed to perform critical analysis of single-phase, two-phase and multi-fluid flow in reactor components. The basic numerical approach to solving the governing equations common to all the codes is presented and the additional constitutive relationships required for closure are discussed. Particular applications are presented for a number of computer codes. (author). 12 refs

CHANGE: A numerical model for three-dimensional modelling of channelized flow in rock: Theory and design

International Nuclear Information System (INIS)

Billaux, D.; Long, J.C.S.; Peterson, J.E. Jr.

1990-03-01

A model for channelized flow in three-dimensional, random networks of fractures has been developed. In this model, the fractures are disc-shaped discontinuities in an impermeable matrix. Within each fracture, flow occurs only in a network of random channels. The channels in each fracture can be generated independently with random distributions of length, conductivity, and orientation in the fracture plane. Boundary conditions are specified on the sides of a ''flow region,'' and at the intersections of the channels with interior ''holes'' specified by the user to simulate boreholes or drifts. This code is part of a set of programs used to generate two-dimensional or three-dimensional random fracture networks, plot them, compute flow through them and analyze the results. 8 refs., 13 figs

Hybrid-dimensional modelling of two-phase flow through fractured porous media with enhanced matrix fracture transmission conditions

Science.gov (United States)

Brenner, Konstantin; Hennicker, Julian; Masson, Roland; Samier, Pierre

2018-03-01

In this work, we extend, to two-phase flow, the single-phase Darcy flow model proposed in [26], [12] in which the (d - 1)-dimensional flow in the fractures is coupled with the d-dimensional flow in the matrix. Three types of so called hybrid-dimensional two-phase Darcy flow models are proposed. They all account for fractures acting either as drains or as barriers, since they allow pressure jumps at the matrix-fracture interfaces. The models also permit to treat gravity dominated flow as well as discontinuous capillary pressure at the material interfaces. The three models differ by their transmission conditions at matrix fracture interfaces: while the first model accounts for the nonlinear two-phase Darcy flux conservations, the second and third ones are based on the linear single phase Darcy flux conservations combined with different approximations of the mobilities. We adapt the Vertex Approximate Gradient (VAG) scheme to this problem, in order to account for anisotropy and heterogeneity aspects as well as for applicability on general meshes. Several test cases are presented to compare our hybrid-dimensional models to the generic equi-dimensional model, in which fractures have the same dimension as the matrix, leading to deep insight about the quality of the proposed reduced models.

Fully Automated Data Collection Using PAM and the Development of PAM/SPACE Reversible Cassettes

Science.gov (United States)

Hiraki, Masahiko; Watanabe, Shokei; Chavas, Leonard M. G.; Yamada, Yusuke; Matsugaki, Naohiro; Igarashi, Noriyuki; Wakatsuki, Soichi; Fujihashi, Masahiro; Miki, Kunio; Baba, Seiki; Ueno, Go; Yamamoto, Masaki; Suzuki, Mamoru; Nakagawa, Atsushi; Watanabe, Nobuhisa; Tanaka, Isao

2010-06-01

To remotely control and automatically collect data in high-throughput X-ray data collection experiments, the Structural Biology Research Center at the Photon Factory (PF) developed and installed sample exchange robots PAM (PF Automated Mounting system) at PF macromolecular crystallography beamlines; BL-5A, BL-17A, AR-NW12A and AR-NE3A. We developed and installed software that manages the flow of the automated X-ray experiments; sample exchanges, loop-centering and X-ray diffraction data collection. The fully automated data collection function has been available since February 2009. To identify sample cassettes, PAM employs a two-dimensional bar code reader. New beamlines, BL-1A at the Photon Factory and BL32XU at SPring-8, are currently under construction as part of Targeted Proteins Research Program (TPRP) by the Ministry of Education, Culture, Sports, Science and Technology of Japan. However, different robots, PAM and SPACE (SPring-8 Precise Automatic Cryo-sample Exchanger), will be installed at BL-1A and BL32XU, respectively. For the convenience of the users of both facilities, pins and cassettes for PAM and SPACE are developed as part of the TPRP.

Three dimensional steady subsonic Euler flows in bounded nozzles

Science.gov (United States)

Chen, Chao; Xie, Chunjing

The existence and uniqueness of three dimensional steady subsonic Euler flows in rectangular nozzles were obtained when prescribing normal component of momentum at both the entrance and exit. If, in addition, the normal component of the voriticity and the variation of Bernoulli's function at the entrance are both zero, then there exists a unique subsonic potential flow when the magnitude of the normal component of the momentum is less than a critical number. As the magnitude of the normal component of the momentum approaches the critical number, the associated flows converge to a subsonic-sonic flow. Furthermore, when the normal component of vorticity and the variation of Bernoulli function are both small, the existence and uniqueness of subsonic Euler flows with non-zero vorticity are established. The proof of these results is based on a new formulation for the Euler system, a priori estimate for nonlinear elliptic equations with nonlinear boundary conditions, detailed study for a linear div-curl system, and delicate estimate for the transport equations.

Dynamics of vortex interactions in two-dimensional flows

DEFF Research Database (Denmark)

Juul Rasmussen, J.; Nielsen, A.H.; Naulin, V.

2002-01-01

The dynamics and interaction of like-signed vortex structures in two dimensional flows are investigated by means of direct numerical solutions of the two-dimensional Navier-Stokes equations. Two vortices with distributed vorticity merge when their distance relative to their radius, d/R-0l. is below...... a critical value, a(c). Using the Weiss-field, a(c) is estimated for vortex patches. Introducing an effective radius for vortices with distributed vorticity, we find that 3.3 ... is effectively producing small scale structures and the relation to the enstrophy "cascade" in developed 2D turbulence is discussed. The influence of finite viscosity on the merging is also investigated. Additionally, we examine vortex interactions on a finite domain, and discuss the results in connection...

Automated system for load flow prediction in power substations using artificial neural networks

Directory of Open Access Journals (Sweden)

Arlys Michel Lastre Aleaga

2015-09-01

Full Text Available The load flow is of great importance in assisting the process of decision making and planning of generation, distribution and transmission of electricity. Ignorance of the values in this indicator, as well as their inappropriate prediction, difficult decision making and efficiency of the electricity service, and can cause undesirable situations such as; the on demand, overheating of the components that make up a substation, and incorrect planning processes electricity generation and distribution. Given the need for prediction of flow of electric charge of the substations in Ecuador this research proposes the concept for the development of an automated prediction system employing the use of Artificial Neural Networks.

flowAI: automatic and interactive anomaly discerning tools for flow cytometry data.

Science.gov (United States)

Monaco, Gianni; Chen, Hao; Poidinger, Michael; Chen, Jinmiao; de Magalhães, João Pedro; Larbi, Anis

2016-08-15

Flow cytometry (FCM) is widely used in both clinical and basic research to characterize cell phenotypes and functions. The latest FCM instruments analyze up to 20 markers of individual cells, producing high-dimensional data. This requires the use of the latest clustering and dimensionality reduction techniques to automatically segregate cell sub-populations in an unbiased manner. However, automated analyses may lead to false discoveries due to inter-sample differences in quality and properties. We present an R package, flowAI, containing two methods to clean FCM files from unwanted events: (i) an automatic method that adopts algorithms for the detection of anomalies and (ii) an interactive method with a graphical user interface implemented into an R shiny application. The general approach behind the two methods consists of three key steps to check and remove suspected anomalies that derive from (i) abrupt changes in the flow rate, (ii) instability of signal acquisition and (iii) outliers in the lower limit and margin events in the upper limit of the dynamic range. For each file analyzed our software generates a summary of the quality assessment from the aforementioned steps. The software presented is an intuitive solution seeking to improve the results not only of manual but also and in particular of automatic analysis on FCM data. R source code available through Bioconductor: http://bioconductor.org/packages/flowAI/ CONTACTS: mongianni1@gmail.com or Anis_Larbi@immunol.a-star.edu.sg Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

A graphical automated detection system to locate hardwood log surface defects using high-resolution three-dimensional laser scan data

Science.gov (United States)

Liya Thomas; R. Edward. Thomas

2011-01-01

We have developed an automated defect detection system and a state-of-the-art Graphic User Interface (GUI) for hardwood logs. The algorithm identifies defects at least 0.5 inch high and at least 3 inches in diameter on barked hardwood log and stem surfaces. To summarize defect features and to build a knowledge base, hundreds of defects were measured, photographed, and...

K-FIX: a computer program for transient, two-dimensional, two-fluid flow

International Nuclear Information System (INIS)

Rivard, W.C.; Torrey, M.D.

1976-11-01

The transient dynamics of two-dimensional, two-phase flow with interfacial exchange are calculated at all flow speeds using the K-FIX program. Each phase is described in terms of its own density, velocity, and temperature. The six field equations for the two phases couple through mass, momentum, and energy exchange. The equations are solved using an Eulerian finite difference technique that implicitly couples the rates of phase transitions, momentum, and energy exchange to determination of the pressure, density, and velocity fields. The implicit solution is accomplished iteratively without linearizing the equations, thus eliminating the need for numerous derivative terms. K-FIX is written in a highly modular form to be easily adaptable to a variety of problems. It is applied to growth of an isolated steam bubble in a superheated water pool

Automated Analysis of Flow Cytometry Data to Reduce Inter-Lab Variation in the Detection of Major Histocompatibility Complex Multimer-Binding T Cells

DEFF Research Database (Denmark)

Pedersen, Natasja Wulff; Chandran, P. Anoop; Qian, Yu

2017-01-01

Manual analysis of flow cytometry data and subjective gate-border decisions taken by individuals continue to be a source of variation in the assessment of antigen-specific T cells when comparing data across laboratories, and also over time in individual labs. Therefore, strategies to provide...... automated analysis of major histocompatibility complex (MHC) multimer-binding T cells represent an attractive solution to decrease subjectivity and technical variation. The challenge of using an automated analysis approach is that MHC multimer-binding T cell populations are often rare and therefore...... laboratories. We used three different methods, FLOw Clustering without K (FLOCK), Scalable Weighted Iterative Flow-clustering Technique (SWIFT), and ReFlow to analyze flow cytometry data files from 28 laboratories. Each laboratory screened for antigen-responsive T cell populations with frequency ranging from 0...

Measuring three-dimensional flow structures in the conductive airways using 3D-PTV

Science.gov (United States)

Janke, Thomas; Schwarze, Rüdiger; Bauer, Katrin

2017-10-01

Detailed information about flow patterns and mass transport in the conductive airways is of crucial interest to improve ventilation strategies as well as targeted drug delivery. Despite a vast number of flow studies in this field, there is still a dearth in experimental data of three-dimensional flow patterns, in particular for the validation of numerical results. Therefore, oscillating flow within a realistic model of the upper human conductive airways is studied here experimentally. The investigated range of Reynolds numbers is Re = 250-2000 and the Womersley number is varied between α = 1.9-5.1, whereby physiological flow at rest conditions is included. In employing the three-dimensional particle tracking velocimetry measurement technique, we can directly visualize airway specific flow structures as well as examine Lagrangian trajectory statistics, which has not been covered to date. The systematic variation of characteristic flow parameters in combination with the advanced visualization technique sheds new light on the mechanisms of evolving flow patterns. By determining Lagrangian properties such as pathline curvature and torsion, we find that both strongly depend on the Reynolds number. Moreover, the probability density function of the curvature reveals a unique shape for certain flow regions and resembles a turbulent like behavior at the small scales.

Modular high power diode lasers with flexible 3D multiplexing arrangement optimized for automated manufacturing

Science.gov (United States)

Könning, Tobias; Bayer, Andreas; Plappert, Nora; Faßbender, Wilhelm; Dürsch, Sascha; Küster, Matthias; Hubrich, Ralf; Wolf, Paul; Köhler, Bernd; Biesenbach, Jens

2018-02-01

A novel 3-dimensional arrangement of mirrors is used to re-arrange beams from 1-D and 2-D high power diode laser arrays. The approach allows for a variety of stacking geometries, depending on individual requirements. While basic building blocks, including collimating optics, always remain the same, most adaptations can be realized by simple rearrangement of a few optical components. Due to fully automated alignment processes, the required changes can be realized in software by changing coordinates, rather than requiring customized mechanical components. This approach minimizes development costs due to its flexibility, while reducing overall product cost by using similar building blocks for a variety of products and utilizing a high grade of automation. The modules can be operated with industrial grade water, lowering overall system and maintenance cost. Stackable macro coolers are used as the smallest building block of the system. Each cooler can hold up to five diode laser bars. Micro optical components, collimating the beam, are mounted directly to the cooler. All optical assembly steps are fully automated. Initially, the beams from all laser bars propagate in the same direction. Key to the concept is an arrangement of deflectors, which re-arrange the beams into a 2-D array of the desired shape and high fill factor. Standard multiplexing techniques like polarization- or wavelengths-multiplexing have been implemented as well. A variety of fiber coupled modules ranging from a few hundred watts of optical output power to multiple kilowatts of power, as well as customized laser spot geometries like uniform line sources, have been realized.

Automated Patient Identification and Localization Error Detection Using 2-Dimensional to 3-Dimensional Registration of Kilovoltage X-Ray Setup Images

International Nuclear Information System (INIS)

Lamb, James M.; Agazaryan, Nzhde; Low, Daniel A.

2013-01-01

Purpose: To determine whether kilovoltage x-ray projection radiation therapy setup images could be used to perform patient identification and detect gross errors in patient setup using a computer algorithm. Methods and Materials: Three patient cohorts treated using a commercially available image guided radiation therapy (IGRT) system that uses 2-dimensional to 3-dimensional (2D-3D) image registration were retrospectively analyzed: a group of 100 cranial radiation therapy patients, a group of 100 prostate cancer patients, and a group of 83 patients treated for spinal lesions. The setup images were acquired using fixed in-room kilovoltage imaging systems. In the prostate and cranial patient groups, localizations using image registration were performed between computed tomography (CT) simulation images from radiation therapy planning and setup x-ray images corresponding both to the same patient and to different patients. For the spinal patients, localizations were performed to the correct vertebral body, and to an adjacent vertebral body, using planning CTs and setup x-ray images from the same patient. An image similarity measure used by the IGRT system image registration algorithm was extracted from the IGRT system log files and evaluated as a discriminant for error detection. Results: A threshold value of the similarity measure could be chosen to separate correct and incorrect patient matches and correct and incorrect vertebral body localizations with excellent accuracy for these patient cohorts. A 10-fold cross-validation using linear discriminant analysis yielded misclassification probabilities of 0.000, 0.0045, and 0.014 for the cranial, prostate, and spinal cases, respectively. Conclusions: An automated measure of the image similarity between x-ray setup images and corresponding planning CT images could be used to perform automated patient identification and detection of localization errors in radiation therapy treatments

Automated Patient Identification and Localization Error Detection Using 2-Dimensional to 3-Dimensional Registration of Kilovoltage X-Ray Setup Images

Energy Technology Data Exchange (ETDEWEB)

Lamb, James M., E-mail: jlamb@mednet.ucla.edu; Agazaryan, Nzhde; Low, Daniel A.

2013-10-01

Purpose: To determine whether kilovoltage x-ray projection radiation therapy setup images could be used to perform patient identification and detect gross errors in patient setup using a computer algorithm. Methods and Materials: Three patient cohorts treated using a commercially available image guided radiation therapy (IGRT) system that uses 2-dimensional to 3-dimensional (2D-3D) image registration were retrospectively analyzed: a group of 100 cranial radiation therapy patients, a group of 100 prostate cancer patients, and a group of 83 patients treated for spinal lesions. The setup images were acquired using fixed in-room kilovoltage imaging systems. In the prostate and cranial patient groups, localizations using image registration were performed between computed tomography (CT) simulation images from radiation therapy planning and setup x-ray images corresponding both to the same patient and to different patients. For the spinal patients, localizations were performed to the correct vertebral body, and to an adjacent vertebral body, using planning CTs and setup x-ray images from the same patient. An image similarity measure used by the IGRT system image registration algorithm was extracted from the IGRT system log files and evaluated as a discriminant for error detection. Results: A threshold value of the similarity measure could be chosen to separate correct and incorrect patient matches and correct and incorrect vertebral body localizations with excellent accuracy for these patient cohorts. A 10-fold cross-validation using linear discriminant analysis yielded misclassification probabilities of 0.000, 0.0045, and 0.014 for the cranial, prostate, and spinal cases, respectively. Conclusions: An automated measure of the image similarity between x-ray setup images and corresponding planning CT images could be used to perform automated patient identification and detection of localization errors in radiation therapy treatments.

Automated patient identification and localization error detection using 2-dimensional to 3-dimensional registration of kilovoltage x-ray setup images.

Science.gov (United States)

Lamb, James M; Agazaryan, Nzhde; Low, Daniel A

2013-10-01

To determine whether kilovoltage x-ray projection radiation therapy setup images could be used to perform patient identification and detect gross errors in patient setup using a computer algorithm. Three patient cohorts treated using a commercially available image guided radiation therapy (IGRT) system that uses 2-dimensional to 3-dimensional (2D-3D) image registration were retrospectively analyzed: a group of 100 cranial radiation therapy patients, a group of 100 prostate cancer patients, and a group of 83 patients treated for spinal lesions. The setup images were acquired using fixed in-room kilovoltage imaging systems. In the prostate and cranial patient groups, localizations using image registration were performed between computed tomography (CT) simulation images from radiation therapy planning and setup x-ray images corresponding both to the same patient and to different patients. For the spinal patients, localizations were performed to the correct vertebral body, and to an adjacent vertebral body, using planning CTs and setup x-ray images from the same patient. An image similarity measure used by the IGRT system image registration algorithm was extracted from the IGRT system log files and evaluated as a discriminant for error detection. A threshold value of the similarity measure could be chosen to separate correct and incorrect patient matches and correct and incorrect vertebral body localizations with excellent accuracy for these patient cohorts. A 10-fold cross-validation using linear discriminant analysis yielded misclassification probabilities of 0.000, 0.0045, and 0.014 for the cranial, prostate, and spinal cases, respectively. An automated measure of the image similarity between x-ray setup images and corresponding planning CT images could be used to perform automated patient identification and detection of localization errors in radiation therapy treatments. Copyright © 2013 Elsevier Inc. All rights reserved.

Partial Cavity Flows at High Reynolds Numbers

Science.gov (United States)

Makiharju, Simo; Elbing, Brian; Wiggins, Andrew; Dowling, David; Perlin, Marc; Ceccio, Steven

2009-11-01

Partial cavity flows created for friction drag reduction were examined on a large-scale. Partial cavities were investigated at Reynolds numbers up to 120 million, and stable cavities with frictional drag reduction of more than 95% were attained at optimal conditions. The model used was a 3 m wide and 12 m long flat plate with a plenum on the bottom. To create the partial cavity, air was injected at the base of an 18 cm backwards-facing step 2.1 m from the leading edge. The geometry at the cavity closure was varied for different flow speeds to optimize the closure of the cavity. Cavity gas flux, thickness, frictional loads, and cavity pressures were measured over a range of flow speeds and air injection fluxes. High-speed video was used extensively to investigate the unsteady three dimensional cavity closure, the overall cavity shape and oscillations.

Three-dimensional multi-relaxation-time lattice Boltzmann front-tracking method for two-phase flow

International Nuclear Information System (INIS)

Xie Hai-Qiong; Zeng Zhong; Zhang Liang-Qi

2016-01-01

We developed a three-dimensional multi-relaxation-time lattice Boltzmann method for incompressible and immiscible two-phase flow by coupling with a front-tracking technique. The flow field was simulated by using an Eulerian grid, an adaptive unstructured triangular Lagrangian grid was applied to track explicitly the motion of the two-fluid interface, and an indicator function was introduced to update accurately the fluid properties. The surface tension was computed directly on a triangular Lagrangian grid, and then the surface tension was distributed to the background Eulerian grid. Three benchmarks of two-phase flow, including the Laplace law for a stationary drop, the oscillation of a three-dimensional ellipsoidal drop, and the drop deformation in a shear flow, were simulated to validate the present model. (paper)

Investigation of secondary flows in turbulent pipe flows with three-dimensional sinusoidal walls

Science.gov (United States)

Chan, Leon; MacDonald, Michael; Chung, Daniel; Hutchins, Nicholas; Ooi, Andrew

2017-11-01

The occurrence of secondary flows is systematically investigated via Direct Numerical Simulations (DNS) of turbulent flow in a rough wall pipe at friction Reynolds numbers of 540. In this study, the peak-to-trough height of the roughness elements, which consist of three-dimensional sinusoidal roughness, is fixed at 120 viscous units while the wavelength of the roughness elements is varied. The solidity or effective slope (ES) of the roughness ranges from the sparse regime (ES = 0.18) to the closely packed roughness/dense regime (ES = 0.72). The time-independent dispersive stresses, which arise due to the stationary features of the flow, are analysed and are found to increase with increasing roughness wavelength. These dispersive stresses are related to the occurrence of secondary flows and are maximum within the roughness canopy. Above the crest of the roughness elements, the dispersive stresses reduce to zero at wall-normal heights greater than half of the roughness wavelength. This study has found that the size and wall-normal extent of the secondary flows scales with the roughness wavelength and can reach wall-normal heights of almost half of the pipe radius.

Enhancement of automated blood flow estimates (ENABLE) from arterial spin-labeled MRI.

Science.gov (United States)

Shirzadi, Zahra; Stefanovic, Bojana; Chappell, Michael A; Ramirez, Joel; Schwindt, Graeme; Masellis, Mario; Black, Sandra E; MacIntosh, Bradley J

2018-03-01

To validate a multiparametric automated algorithm-ENhancement of Automated Blood fLow Estimates (ENABLE)-that identifies useful and poor arterial spin-labeled (ASL) difference images in multiple postlabeling delay (PLD) acquisitions and thereby improve clinical ASL. ENABLE is a sort/check algorithm that uses a linear combination of ASL quality features. ENABLE uses simulations to determine quality weighting factors based on an unconstrained nonlinear optimization. We acquired a set of 6-PLD ASL images with 1.5T or 3.0T systems among 98 healthy elderly and adults with mild cognitive impairment or dementia. We contrasted signal-to-noise ratio (SNR) of cerebral blood flow (CBF) images obtained with ENABLE vs. conventional ASL analysis. In a subgroup, we validated our CBF estimates with single-photon emission computed tomography (SPECT) CBF images. ENABLE produced significantly increased SNR compared to a conventional ASL analysis (Wilcoxon signed-rank test, P Wilcoxon signed-rank test, P < 0.0001) and this similarity was strongly related to ASL SNR (t = 24, P < 0.0001). These findings suggest that ENABLE improves CBF image quality from multiple PLD ASL in dementia cohorts at either 1.5T or 3.0T, achieved by multiparametric quality features that guided postprocessing of dementia ASL. 2 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2018;47:647-655. © 2017 International Society for Magnetic Resonance in Medicine.

Gyrotactic suppression and emergence of chaotic trajectories of swimming particles in three-dimensional flows

Science.gov (United States)

Richardson, S. I. Heath; Baggaley, A. W.; Hill, N. A.

2018-02-01

We study the effects of imposed three-dimensional flows on the trajectories and mixing of gyrotactic swimming microorganisms and identify phenomena not seen in flows restricted to two dimensions. Through numerical simulation of Taylor-Green and Arnold-Beltrami-Childress (ABC) flows, we explore the role that the flow and the cell shape play in determining the long-term configuration of the cells' trajectories, which often take the form of multiple sinuous and helical "plumelike" structures, even in the chaotic ABC flow. This gyrotactic suppression of Lagrangian chaos persists even in the presence of random noise. Analytical solutions for a number of cases reveal the how plumes form and the nature of the competition between torques acting on individual cells. Furthermore, studies of Lyapunov exponents reveal that, as the ratio of cell swimming speed relative to the flow speed increases from zero, the initial chaotic trajectories are first suppressed and then give way to a second unexpected window of chaotic trajectories at speeds greater than unity, before suppression of chaos at high relative swimming speeds.

Automated Sample Preparation for Radiogenic and Non-Traditional Metal Isotopes: Removing an Analytical Barrier for High Sample Throughput

Science.gov (United States)

Field, M. Paul; Romaniello, Stephen; Gordon, Gwyneth W.; Anbar, Ariel D.; Herrmann, Achim; Martinez-Boti, Miguel A.; Anagnostou, Eleni; Foster, Gavin L.

2014-05-01

MC-ICP-MS has dramatically improved the analytical throughput for high-precision radiogenic and non-traditional isotope ratio measurements, compared to TIMS. The generation of large data sets, however, remains hampered by tedious manual drip chromatography required for sample purification. A new, automated chromatography system reduces the laboratory bottle neck and expands the utility of high-precision isotope analyses in applications where large data sets are required: geochemistry, forensic anthropology, nuclear forensics, medical research and food authentication. We have developed protocols to automate ion exchange purification for several isotopic systems (B, Ca, Fe, Cu, Zn, Sr, Cd, Pb and U) using the new prepFAST-MC™ (ESI, Nebraska, Omaha). The system is not only inert (all-flouropolymer flow paths), but is also very flexible and can easily facilitate different resins, samples, and reagent types. When programmed, precise and accurate user defined volumes and flow rates are implemented to automatically load samples, wash the column, condition the column and elute fractions. Unattended, the automated, low-pressure ion exchange chromatography system can process up to 60 samples overnight. Excellent reproducibility, reliability, recovery, with low blank and carry over for samples in a variety of different matrices, have been demonstrated to give accurate and precise isotopic ratios within analytical error for several isotopic systems (B, Ca, Fe, Cu, Zn, Sr, Cd, Pb and U). This illustrates the potential of the new prepFAST-MC™ (ESI, Nebraska, Omaha) as a powerful tool in radiogenic and non-traditional isotope research.

Regional Quasi-Three-Dimensional Unsaturated-Saturated Water Flow Model Based on a Vertical-Horizontal Splitting Concept

Directory of Open Access Journals (Sweden)

Yan Zhu

2016-05-01

Full Text Available Due to the high nonlinearity of the three-dimensional (3-D unsaturated-saturated water flow equation, using a fully 3-D numerical model is computationally expensive for large scale applications. A new unsaturated-saturated water flow model is developed in this paper based on the vertical/horizontal splitting (VHS concept to split the 3-D unsaturated-saturated Richards’ equation into a two-dimensional (2-D horizontal equation and a one-dimensional (1-D vertical equation. The horizontal plane of average head gradient in the triangular prism element is derived to split the 3-D equation into the 2-D equation. The lateral flow in the horizontal plane of average head gradient represented by the 2-D equation is then calculated by the water balance method. The 1-D vertical equation is discretized by the finite difference method. The two equations are solved simultaneously by coupling them into a unified nonlinear system with a single matrix. Three synthetic cases are used to evaluate the developed model code by comparing the modeling results with those of Hydrus1D, SWMS2D and FEFLOW. We further apply the model to regional-scale modeling to simulate groundwater table fluctuations for assessing the model applicability in complex conditions. The proposed modeling method is found to be accurate with respect to measurements.

Decaying quasi-two-dimensional viscous flow on a square domain

DEFF Research Database (Denmark)

Konijnenberg, J.A. van de; Flor, J.B.; Heijst, G.J.F. van

1998-01-01

A comparison is made between experimental, numerical and analytical results for the two-dimensional flow on a square domain. The experiments concern the flow at the interface of a two-layer stratified fluid, evoked by either stirring the fluid with a rake, or by injecting additional fluid...... at the interface. Two numerical simulations were performed with initial conditions and boundary conditions that correspond approximately with those met in the experiments. The analytical results concern the calculation of the lowest modes of a decaying Stokes flow on a square domain. At late times...... relationship between vorticity and stream function in the experiments and the simulations. (C) 1998 American Institute of Physics....

Rarefied gas flow simulations using high-order gas-kinetic unified algorithms for Boltzmann model equations

Science.gov (United States)

Li, Zhi-Hui; Peng, Ao-Ping; Zhang, Han-Xin; Yang, Jaw-Yen

2015-04-01

This article reviews rarefied gas flow computations based on nonlinear model Boltzmann equations using deterministic high-order gas-kinetic unified algorithms (GKUA) in phase space. The nonlinear Boltzmann model equations considered include the BGK model, the Shakhov model, the Ellipsoidal Statistical model and the Morse model. Several high-order gas-kinetic unified algorithms, which combine the discrete velocity ordinate method in velocity space and the compact high-order finite-difference schemes in physical space, are developed. The parallel strategies implemented with the accompanying algorithms are of equal importance. Accurate computations of rarefied gas flow problems using various kinetic models over wide ranges of Mach numbers 1.2-20 and Knudsen numbers 0.0001-5 are reported. The effects of different high resolution schemes on the flow resolution under the same discrete velocity ordinate method are studied. A conservative discrete velocity ordinate method to ensure the kinetic compatibility condition is also implemented. The present algorithms are tested for the one-dimensional unsteady shock-tube problems with various Knudsen numbers, the steady normal shock wave structures for different Mach numbers, the two-dimensional flows past a circular cylinder and a NACA 0012 airfoil to verify the present methodology and to simulate gas transport phenomena covering various flow regimes. Illustrations of large scale parallel computations of three-dimensional hypersonic rarefied flows over the reusable sphere-cone satellite and the re-entry spacecraft using almost the largest computer systems available in China are also reported. The present computed results are compared with the theoretical prediction from gas dynamics, related DSMC results, slip N-S solutions and experimental data, and good agreement can be found. The numerical experience indicates that although the direct model Boltzmann equation solver in phase space can be computationally expensive

Two-dimensional electron flow in pulsed power transmission lines and plasma opening switches

International Nuclear Information System (INIS)

Church, B.W.; Longcope, D.W.; Ng, C.K.; Sudan, R.N.

1991-01-01

The operation of magnetically insulated transmission lines (MITL) and the interruption of current in a plasma opening switch (POS) are determined by the physics of the electrons emitted by the cathode surface. A mathematical model describes the self-consistent two-dimensional flow of an electron fluid. A finite element code, FERUS, has been developed to solve the two equations which describe Poisson's and Ampere's law in two dimensions. The solutions from this code are obtained for parameters where the electron orbits are considerably modified by the self-magnetic field of the current. Next, the self-insulated electron flow in a MITL with a step change in cross-section is studied using a conventional two-dimensional fully electromagnetic particle-in-cell code, MASK. The equations governing two-dimensional quasi-static electron flow are solved numerically by a third technique which is suitable for predicting current interruption in a POS. The object of the study is to determine the critical load impedance, Z CL , required for current interruption for a given applied voltage, cathode voltage and plasma length. (author). 9 refs, 5 figs

Automated cell type discovery and classification through knowledge transfer

Science.gov (United States)

Lee, Hao-Chih; Kosoy, Roman; Becker, Christine E.

2017-01-01

Abstract Motivation: Recent advances in mass cytometry allow simultaneous measurements of up to 50 markers at single-cell resolution. However, the high dimensionality of mass cytometry data introduces computational challenges for automated data analysis and hinders translation of new biological understanding into clinical applications. Previous studies have applied machine learning to facilitate processing of mass cytometry data. However, manual inspection is still inevitable and becoming the barrier to reliable large-scale analysis. Results: We present a new algorithm called Automated Cell-type Discovery and Classification (ACDC) that fully automates the classification of canonical cell populations and highlights novel cell types in mass cytometry data. Evaluations on real-world data show ACDC provides accurate and reliable estimations compared to manual gating results. Additionally, ACDC automatically classifies previously ambiguous cell types to facilitate discovery. Our findings suggest that ACDC substantially improves both reliability and interpretability of results obtained from high-dimensional mass cytometry profiling data. Availability and Implementation: A Python package (Python 3) and analysis scripts for reproducing the results are availability on https://bitbucket.org/dudleylab/acdc. Contact: brian.kidd@mssm.edu or joel.dudley@mssm.edu Supplementary information: Supplementary data are available at Bioinformatics online. PMID:28158442

Cavitation performance improvement of high specific speed mixed-flow pump

International Nuclear Information System (INIS)

Chen, T; Sun, Y B; Wu, D Z; Wang, L Q

2012-01-01

Cavitation performance improvement of large hydraulic machinery such as pump and turbine has been a hot topic for decades. During the design process of the pumps, in order to minimize size, weight and cost centrifugal and mixed-flow pump impellers are required to operate at the highest possible rotational speed. The rotational speed is limited by the phenomenon of cavitation. The hydraulic model of high-speed mixed-flow pump with large flow rate and high pumping head, which was designed based on the traditional method, always involves poor cavitation performance. In this paper, on the basis of the same hydraulic design parameters, two hydraulic models of high-speed mixed-flow pump were designed by using different methods, in order to investigate the cavitation and hydraulic performance of the two models, the method of computational fluid dynamics (CFD) was adopted for internal flow simulation of the high specific speed mixed-flow pump. Based on the results of numerical simulation, the influences of impeller parameters and three-dimensional configuration on pressure distribution of the blades' suction surfaces were analyzed. The numerical simulation results shows a better pressure distribution and lower pressure drop around the leading edge of the improved model. The research results could provide references to the design and optimization of the anti-cavitation blade.

Three-dimensional, automated, real-time video system for tracking limb motion in brain-machine interface studies.

Science.gov (United States)

Peikon, Ian D; Fitzsimmons, Nathan A; Lebedev, Mikhail A; Nicolelis, Miguel A L

2009-06-15

Collection and analysis of limb kinematic data are essential components of the study of biological motion, including research into biomechanics, kinesiology, neurophysiology and brain-machine interfaces (BMIs). In particular, BMI research requires advanced, real-time systems capable of sampling limb kinematics with minimal contact to the subject's body. To answer this demand, we have developed an automated video tracking system for real-time tracking of multiple body parts in freely behaving primates. The system employs high-contrast markers painted on the animal's joints to continuously track the three-dimensional positions of their limbs during activity. Two-dimensional coordinates captured by each video camera are combined and converted to three-dimensional coordinates using a quadratic fitting algorithm. Real-time operation of the system is accomplished using direct memory access (DMA). The system tracks the markers at a rate of 52 frames per second (fps) in real-time and up to 100fps if video recordings are captured to be later analyzed off-line. The system has been tested in several BMI primate experiments, in which limb position was sampled simultaneously with chronic recordings of the extracellular activity of hundreds of cortical cells. During these recordings, multiple computational models were employed to extract a series of kinematic parameters from neuronal ensemble activity in real-time. The system operated reliably under these experimental conditions and was able to compensate for marker occlusions that occurred during natural movements. We propose that this system could also be extended to applications that include other classes of biological motion.

Slip-line field analysis of metal flow during two dimensional forging

International Nuclear Information System (INIS)

Fenton, R.G.; Khataan, H.A.

1981-01-01

A method of computation and a computer software package were developed for solving problems of two dimensional plastic flow between symmetrical dies of any specified shape. The load required to initiate plastic flow, the stress and velocity distributions in the plastic region of the metal, and the pressure distribution acting on the die are determined. The method can be used to solve any symmetrical plane strain flow problem regardless of the complexity of the die. The accurate solution obtained by this efficient method can provide valuable help to forging die designers. (Author) [pt

Numerical simulation of three-dimensional unsteady flow in a scroll expander applied in waste heat recovery

International Nuclear Information System (INIS)

Song, P P; Wei, M S; Shi, L; Ma, C C

2013-01-01

Three-dimensional numerical simulations of a scroll expander were performed with dynamic mesh technology. R245fa was selected as the working fluid in the simulations. The PISO algorithm was applied to solve the governing equations with RNG k-ε turbulent model. The distribution and variation of three-dimensional flow field inside the scroll expander were obtained. The research indicates that the flow field is nonuniform and asymmetrical distributions exist inside the expander. Vortex flows also exist in some working chambers. Dynamic clearance leakage flows and inlet orifice throttling have great effects on the flow field distribution. Transient output torque and the mass flux have periodic fluctuations during the working cycles

Flow Patterns and Thermal Drag in a One-Dimensional Inviscid Channel with Heating or Cooling

Institute of Scientific and Technical Information of China (English)

无

1993-01-01

In this paper investigations on the flow patterns and the thermal drag phenomenon in one -dimensional inviscid channel flow with heating or cooling are described and discussed:expressions of flow rate ratio and thermal drag coefficient for different flow patterns and its physical mechanism are presented.

Assembly of positioner of automated two-dimensional scan coupled to X-ray fluorescence spectrometry

International Nuclear Information System (INIS)

Silva, Leonardo Santiago Melgaço

2011-01-01

This work describes the design and assembling of a prototype automated positioner two-dimensional scanning coupled to X-ray fluorescence spectrometry. The work aims to achieve a portable and easy to use, device of broad utility in the analysis of samples by X-ray fluorescence area of expertise and research. The two-dimensional scanning of the positioner is by means of two stepper motors controlled by a microcontroller PIC 16F877A, encoder and optical sensors. The user interacts with the XY table through an interface program for the Windows operating system, which communicates with the microcontroller through the serial port. The system of Fluorescence Spectroscopy incorporated into the positioner consists of a system commercially available system from the company AMPTEK, where the primary source of excitation of the sample was a source of 241 Am of 59.5 KeV emissions. Resolution and accuracy of tests were performed in the XY scanning process and reproducibility of the same kit with the fluorescence spectrometry X-ray. Qualitative tests by X-ray fluorescence spectrometry in samples were performed to demonstrate the applicability and versatility of the project. It follows that the prototype illustrates a possible adequately to portable device for X-ray spectrometry of two-dimensional. (author)

Using process-oriented interfaces for solving the automation paradox in highly automated navy vessels

NARCIS (Netherlands)

Diggelen, J. van; Post, W.; Rakhorst, M.; Plasmeijer, R.; Staal, W. van

2014-01-01

This paper describes a coherent engineering method for developing high level human machine interaction within a highly automated environment consisting of sensors, actuators, automatic situation assessors and planning devices. Our approach combines ideas from cognitive work analysis, cognitive

Transient simulation of hydropower station with consideration of three-dimensional unsteady flow in turbine

International Nuclear Information System (INIS)

Huang, W D; Fan, H G; Chen, N X

2012-01-01

To study the interaction between the transient flow in pipe and the unsteady turbulent flow in turbine, a coupled model of the transient flow in the pipe and three-dimensional unsteady flow in the turbine is developed based on the method of characteristics and the fluid governing equation in the accelerated rotational relative coordinate. The load-rejection process under the closing of guide vanes of the hydraulic power plant is simulated by the coupled method, the traditional transient simulation method and traditional three-dimensional unsteady flow calculation method respectively and the results are compared. The pressure, unit flux and rotation speed calculated by three methods show a similar change trend. However, because the elastic water hammer in the pipe and the pressure fluctuation in the turbine have been considered in the coupled method, the increase of pressure at spiral inlet is higher and the pressure fluctuation in turbine is stronger.

Transient simulation of hydropower station with consideration of three-dimensional unsteady flow in turbine

Science.gov (United States)

Huang, W. D.; Fan, H. G.; Chen, N. X.

2012-11-01

To study the interaction between the transient flow in pipe and the unsteady turbulent flow in turbine, a coupled model of the transient flow in the pipe and three-dimensional unsteady flow in the turbine is developed based on the method of characteristics and the fluid governing equation in the accelerated rotational relative coordinate. The load-rejection process under the closing of guide vanes of the hydraulic power plant is simulated by the coupled method, the traditional transient simulation method and traditional three-dimensional unsteady flow calculation method respectively and the results are compared. The pressure, unit flux and rotation speed calculated by three methods show a similar change trend. However, because the elastic water hammer in the pipe and the pressure fluctuation in the turbine have been considered in the coupled method, the increase of pressure at spiral inlet is higher and the pressure fluctuation in turbine is stronger.

Finite-time barriers to front propagation in two-dimensional fluid flows

Science.gov (United States)

Mahoney, John R.; Mitchell, Kevin A.

2015-08-01

Recent theoretical and experimental investigations have demonstrated the role of certain invariant manifolds, termed burning invariant manifolds (BIMs), as one-way dynamical barriers to reaction fronts propagating within a flowing fluid. These barriers form one-dimensional curves in a two-dimensional fluid flow. In prior studies, the fluid velocity field was required to be either time-independent or time-periodic. In the present study, we develop an approach to identify prominent one-way barriers based only on fluid velocity data over a finite time interval, which may have arbitrary time-dependence. We call such a barrier a burning Lagrangian coherent structure (bLCS) in analogy to Lagrangian coherent structures (LCSs) commonly used in passive advection. Our approach is based on the variational formulation of LCSs using curves of stationary "Lagrangian shear," introduced by Farazmand et al. [Physica D 278-279, 44 (2014)] in the context of passive advection. We numerically validate our technique by demonstrating that the bLCS closely tracks the BIM for a time-independent, double-vortex channel flow with an opposing "wind."

PARALLEL ALGORITHM FOR THREE-DIMENSIONAL STOKES FLOW SIMULATION USING BOUNDARY ELEMENT METHOD

Directory of Open Access Journals (Sweden)

D. G. Pribytok

2016-01-01

Full Text Available Parallel computing technique for modeling three-dimensional viscous flow (Stokes flow using direct boundary element method is presented. The problem is solved in three phases: sampling and construction of system of linear algebraic equations (SLAE, its decision and finding the velocity of liquid at predetermined points. For construction of the system and finding the velocity, the parallel algorithms using graphics CUDA cards programming technology have been developed and implemented. To solve the system of linear algebraic equations the implemented software libraries are used. A comparison of time consumption for three main algorithms on the example of calculation of viscous fluid motion in three-dimensional cavity is performed.

Computation of two-dimensional isothermal flow in shell-and-tube heat exchangers

International Nuclear Information System (INIS)

Carlucci, L.N.; Galpin, P.F.; Brown, J.D.; Frisina, V.

1983-07-01

A computational procedure is outlined whereby two-dimensional isothermal shell-side flow distributions can be calculated for tube bundles having arbitrary boundaries and flow blocking devices, such as sealing strips, defined in arbitrary locations. The procedure is described in some detail and several computed results are presented to illustrate the robustness and generality of the method

Bridging the Divide between Manual Gating and Bioinformatics with the Bioconductor Package flowFlowJo

Directory of Open Access Journals (Sweden)

John J. Gosink

2009-01-01

Full Text Available In flow cytometry, different cell types are usually selected or “gated” by a series of 1- or 2-dimensional geometric subsets of the measurements made on each cell. This is easily accomplished in commercial flow cytometry packages but it is difficult to work computationally with the results of this process. The ability to retrieve the results and work with both them and the raw data is critical; our experience points to the importance of bioinformatics tools that will allow us to examine gating robustness, combine manual and automated gating, and perform exploratory data analysis. To provide this capability, we have developed a Bioconductor package called flowFlowJo that can import gates defined by the commercial package FlowJo and work with them in a manner consistent with the other flow packages in Bioconductor. We present this package and illustrate some of the ways in which it can be used.

Three-dimensional flow field measurements in a radial inflow turbine scroll using LDV

Science.gov (United States)

Malak, M. F.; Hamed, A.; Tabakoff, W.

1986-01-01

The results of an experimental study of the three-dimensional flow field in a radial inflow turbine scroll are presented. A two-color LDV system was used in the measurement of three orthogonal velocity components at 758 points located throughout the scroll and the unvaned portion of the nozzle. The cold flow experimental results are presented for through-flow velocity contours and the cross velocity vectors.

Automated data processing of high-resolution mass spectra

DEFF Research Database (Denmark)

Hansen, Michael Adsetts Edberg; Smedsgaard, Jørn

of the massive amounts of data. We present an automated data processing method to quantitatively compare large numbers of spectra from the analysis of complex mixtures, exploiting the full quality of high-resolution mass spectra. By projecting all detected ions - within defined intervals on both the time...... infusion of crude extracts into the source taking advantage of the high sensitivity, high mass resolution and accuracy and the limited fragmentation. Unfortunately, there has not been a comparable development in the data processing techniques to fully exploit gain in high resolution and accuracy...... infusion analyses of crude extract to find the relationship between species from several species terverticillate Penicillium, and also that the ions responsible for the segregation can be identified. Furthermore the process can automate the process of detecting unique species and unique metabolites....

Three-dimensional flow phenomena in a wire-wrapped 37-pin fuel bundle for SFR

Energy Technology Data Exchange (ETDEWEB)

Jeong, Jae Ho; Yoo, Jin; Lee, Kwi Lim; Ha, Kwi Seok [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

2015-08-15

Three-dimensional flow phenomena in a wire-wrapped 37-pin fuel assembly mock-up of a Japanese loop-type sodium-cooled fast reactor, Monju, were investigated with a numerical analysis using a general-purpose commercial computational fluid dynamics code, CFX. Complicated and vortical flow phenomena in the wire-wrapped 37-pin fuel assembly were captured by a Reynolds-averaged Navier-Stokes flow simulation using a shear stress transport turbulence model. The main purpose of the current study is to understand the three-dimensional complex flow phenomena in a wire-wrapped fuel assembly to support the license issue for the core design. Computational fluid dynamics results show good agreement with friction factor correlation models. The secondary flow in the corner and edge subchannels is much stronger than that in an interior subchannel. The axial velocity averaged in the corner and edge subchannels is higher than that averaged in the interior subchannels. Three-dimensional multiscale vortex structures start to be formed by an interaction between secondary flows around each wire-wrapped pin. Behavior of the large-scale vortex structures in the corner and edge subchannels is closely related to the relative position between the hexagonal duct wall and the helically wrapped wire spacer. The small-scale vortex is axially developed in the interior subchannels. Furthermore, a driving force on each wire spacer surface is closely related to the relative position between the hexagonal duct wall and the wire spacer.

Mixed finite element simulations in two-dimensional groundwater flow problems

International Nuclear Information System (INIS)

Kimura, Hideo

1989-01-01

A computer code of groundwater flow in two-dimensional porous media based on the mixed finite element method was developed for accurate approximations of Darcy velocities in safety evaluation of radioactive waste disposal. The mixed finite element procedure solves for both the Darcy velocities and pressure heads simultaneously in the Darcy equation and continuity equation. Numerical results of a single well pumping at a constant rate in a uniform flow field showed that the mixed finite element method gives more accurate Darcy velocities nearly 50 % on average error than standard finite element method. (author)

Finite volume model for two-dimensional shallow environmental flow

Science.gov (United States)

Simoes, F.J.M.

2011-01-01

This paper presents the development of a two-dimensional, depth integrated, unsteady, free-surface model based on the shallow water equations. The development was motivated by the desire of balancing computational efficiency and accuracy by selective and conjunctive use of different numerical techniques. The base framework of the discrete model uses Godunov methods on unstructured triangular grids, but the solution technique emphasizes the use of a high-resolution Riemann solver where needed, switching to a simpler and computationally more efficient upwind finite volume technique in the smooth regions of the flow. Explicit time marching is accomplished with strong stability preserving Runge-Kutta methods, with additional acceleration techniques for steady-state computations. A simplified mass-preserving algorithm is used to deal with wet/dry fronts. Application of the model is made to several benchmark cases that show the interplay of the diverse solution techniques.

Coupling Navier-stokes and Cahn-hilliard Equations in a Two-dimensional Annular flow Configuration

KAUST Repository

Vignal, Philippe

2015-06-01

In this work, we present a novel isogeometric analysis discretization for the Navier-Stokes- Cahn-Hilliard equation, which uses divergence-conforming spaces. Basis functions generated with this method can have higher-order continuity, and allow to directly discretize the higher- order operators present in the equation. The discretization is implemented in PetIGA-MF, a high-performance framework for discrete differential forms. We present solutions in a two- dimensional annulus, and model spinodal decomposition under shear flow.

Automation of radiochemical analysis by flow injection techniques. Am-Pu separation using TRU-resinTM sorbent extraction column

International Nuclear Information System (INIS)

Egorov, O.; Washington Univ., Seattle, WA; Grate, J.W.; Ruzicka, J.

1998-01-01

A rapid automated flow injection analysis (FIA) procedure was developed for efficient separation of Am and Pu from each other and from interfering matrix and radionuclide components using a TRU-resin TM column. Selective Pu elution is enabled via on-column reduction. The separation was developed using on-line radioactivity detection. After the separation had been developed, fraction collection was used to obtain the separated fractions. In this manner, a FIA instrument functions as an automated separation workstation capable of unattended operation. (author)

Robust and automated three-dimensional segmentation of densely packed cell nuclei in different biological specimens with Lines-of-Sight decomposition.

Science.gov (United States)

Mathew, B; Schmitz, A; Muñoz-Descalzo, S; Ansari, N; Pampaloni, F; Stelzer, E H K; Fischer, S C

2015-06-08

Due to the large amount of data produced by advanced microscopy, automated image analysis is crucial in modern biology. Most applications require reliable cell nuclei segmentation. However, in many biological specimens cell nuclei are densely packed and appear to touch one another in the images. Therefore, a major difficulty of three-dimensional cell nuclei segmentation is the decomposition of cell nuclei that apparently touch each other. Current methods are highly adapted to a certain biological specimen or a specific microscope. They do not ensure similarly accurate segmentation performance, i.e. their robustness for different datasets is not guaranteed. Hence, these methods require elaborate adjustments to each dataset. We present an advanced three-dimensional cell nuclei segmentation algorithm that is accurate and robust. Our approach combines local adaptive pre-processing with decomposition based on Lines-of-Sight (LoS) to separate apparently touching cell nuclei into approximately convex parts. We demonstrate the superior performance of our algorithm using data from different specimens recorded with different microscopes. The three-dimensional images were recorded with confocal and light sheet-based fluorescence microscopes. The specimens are an early mouse embryo and two different cellular spheroids. We compared the segmentation accuracy of our algorithm with ground truth data for the test images and results from state-of-the-art methods. The analysis shows that our method is accurate throughout all test datasets (mean F-measure: 91%) whereas the other methods each failed for at least one dataset (F-measure≤69%). Furthermore, nuclei volume measurements are improved for LoS decomposition. The state-of-the-art methods required laborious adjustments of parameter values to achieve these results. Our LoS algorithm did not require parameter value adjustments. The accurate performance was achieved with one fixed set of parameter values. We developed a novel and

Towards cooperative guidance and control of highly automated vehicles: H-Mode and Conduct-by-Wire.

Science.gov (United States)

Flemisch, Frank Ole; Bengler, Klaus; Bubb, Heiner; Winner, Hermann; Bruder, Ralph

2014-01-01

This article provides a general ergonomic framework of cooperative guidance and control for vehicles with an emphasis on the cooperation between a human and a highly automated vehicle. In the twenty-first century, mobility and automation technologies are increasingly fused. In the sky, highly automated aircraft are flying with a high safety record. On the ground, a variety of driver assistance systems are being developed, and highly automated vehicles with increasingly autonomous capabilities are becoming possible. Human-centred automation has paved the way for a better cooperation between automation and humans. How can these highly automated systems be structured so that they can be easily understood, how will they cooperate with the human? The presented research was conducted using the methods of iterative build-up and refinement of framework by triangulation, i.e. by instantiating and testing the framework with at least two derived concepts and prototypes. This article sketches a general, conceptual ergonomic framework of cooperative guidance and control of highly automated vehicles, two concepts derived from the framework, prototypes and pilot data. Cooperation is exemplified in a list of aspects and related to levels of the driving task. With the concept 'Conduct-by-Wire', cooperation happens mainly on the guidance level, where the driver can delegate manoeuvres to the automation with a specialised manoeuvre interface. With H-Mode, a haptic-multimodal interaction with highly automated vehicles based on the H(orse)-Metaphor, cooperation is mainly done on guidance and control with a haptically active interface. Cooperativeness should be a key aspect for future human-automation systems. Especially for highly automated vehicles, cooperative guidance and control is a research direction with already promising concepts and prototypes that should be further explored. The application of the presented approach is every human-machine system that moves and includes high

Automated Quantification of Pneumothorax in CT

Science.gov (United States)

Do, Synho; Salvaggio, Kristen; Gupta, Supriya; Kalra, Mannudeep; Ali, Nabeel U.; Pien, Homer

2012-01-01

An automated, computer-aided diagnosis (CAD) algorithm for the quantification of pneumothoraces from Multidetector Computed Tomography (MDCT) images has been developed. Algorithm performance was evaluated through comparison to manual segmentation by expert radiologists. A combination of two-dimensional and three-dimensional processing techniques was incorporated to reduce required processing time by two-thirds (as compared to similar techniques). Volumetric measurements on relative pneumothorax size were obtained and the overall performance of the automated method shows an average error of just below 1%. PMID:23082091

POST: a postprocessor computer code for producing three-dimensional movies of two-phase flow in a reactor vessel

International Nuclear Information System (INIS)

Taggart, K.A.; Liles, D.R.

1977-08-01

The development of the TRAC computer code for analysis of LOCAs in light-water reactors involves the use of a three-dimensional (r-theta-z), two-fluid hydrodynamics model to describe the two-phase flow of steam and water through the reactor vessel. One of the major problems involved in interpreting results from this code is the presentation of three-dimensional flow patterns. The purpose of the report is to present a partial solution to this data display problem. A first version of a code which produces three-dimensional movies of flow in the reactor vessel has been written and debugged. This code (POST) is used as a postprocessor in conjunction with a stand alone three-dimensional two-phase hydrodynamics code (CYLTF) which is a test bed for the three-dimensional algorithms to be used in TRAC

Shroud leakage flow models and a multi-dimensional coupling CFD (computational fluid dynamics) method for shrouded turbines

International Nuclear Information System (INIS)

Zou, Zhengping; Liu, Jingyuan; Zhang, Weihao; Wang, Peng

2016-01-01

Multi-dimensional coupling simulation is an effective approach for evaluating the flow and aero-thermal performance of shrouded turbines, which can balance the simulation accuracy and computing cost effectively. In this paper, 1D leakage models are proposed based on classical jet theories and dynamics equations, which can be used to evaluate most of the main features of shroud leakage flow, including the mass flow rate, radial and circumferential momentum, temperature and the jet width. Then, the 1D models are expanded to 2D distributions on the interface by using a multi-dimensional scaling method. Based on the models and multi-dimensional scaling, a multi-dimensional coupling simulation method for shrouded turbines is developed, in which, some boundary source and sink are set on the interface between the shroud and the main flow passage. To verify the precision, some simulations on the design point and off design points of a 1.5 stage turbine are conducted. It is indicated that the models and methods can give predictions with sufficient accuracy for most of the flow field features and will contribute to pursue deeper understanding and better design methods of shrouded axial turbines, which are the important devices in energy engineering. - Highlights: • Free and wall attached jet theories are used to model the leakage flow in shrouds. • Leakage flow rate is modeled by virtual labyrinth number and residual-energy factor. • A scaling method is applied to 1D model to obtain 2D distributions on interfaces. • A multi-dimensional coupling CFD method for shrouded turbines is proposed. • The proposed coupling method can give accurate predictions with low computing cost.

Three-dimensional numerical modeling of turbulent single-phase and two-phase flow in curved pipes

International Nuclear Information System (INIS)

Xin, R.C.; Dong, Z.F.; Ebadian, M.A.

1996-01-01

In this study, three-dimensional single-phase and two-phase flows in curved pipes have been investigated numerically. Two different pipe configurations were computed. When the results of the single-phase flow simulation were compared with the experimental data, a fairly good agreement was achieved. A flow-developing process has been suggested in single-phase flow, in which the turbulence is stronger near the outer tube wall than near the inner tube wall. For two-phase flow, the Eulerian multiphase model was used to simulate the phase distribution of a three-dimensional gas-liquid bubble flow in curved pipe. The RNG/κ-ε turbulence model was used to determine the turbulence field. An inlet gas void fraction of 5 percent was simulated. The gas phase effects on the liquid phase flow velocity have been examined by comparing the results of single-phase flow and two-phase flow. The findings show that for the downward flow in the U bend, the gas concentrates at the inner portion of the cross section at φ = π/18 - π/6 in most cases. The results of the phase distribution simulation are compared to experimental observations qualitatively and topologically

High-throughput and automated SAXS/USAXS experiment for industrial use at BL19B2 in SPring-8

Energy Technology Data Exchange (ETDEWEB)

Osaka, Keiichi, E-mail: k-osaka@spring8.or.jp; Inoue, Daisuke; Sato, Masugu; Sano, Norimichi [Industrial Application Division, Japan Synchrotron Radiation Research Institute (JASRI/SPring-8), 1-1-1, Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5198 (Japan); Matsumoto, Takuya; Taniguchi, Yosuke [SPring-8 Service Co., Ltd., 1-20-5, Kouto, Shingu, Tatsuno, Hyogo 679-5165 (Japan)

2016-07-27

A highly automated system combining a sample transfer robot with focused SR beam has been established for small-angle and ultra small-angle X-ray scattering (SAXS/USAXS) measurement at BL19B2 for industrial use of SPring-8. High-throughput data collection system can be realized by means of X-ray beam of high photon flux density concentrated by a cylindrical mirror, and a two-dimensional pixel detector PILATUS-2M. For SAXS measurement, we can obtain high-quality data within 1 minute for one exposure using this system. The sample transfer robot has a capacity of 90 samples with a large variety of shapes. The fusion of high-throughput and robotic system has enhanced the usability of SAXS/USAXS capability for industrial application.

Viscoelastic polymer flows and elastic turbulence in three-dimensional porous structures.

Science.gov (United States)

Mitchell, Jonathan; Lyons, Kyle; Howe, Andrew M; Clarke, Andrew

2016-01-14

Viscoelastic polymer solutions flowing through reservoir rocks have been found to improve oil displacement efficiency when the aqueous-phase shear-rate exceeds a critical value. A possible mechanism for this enhanced recovery is elastic turbulence that causes breakup and mobilization of trapped oil ganglia. Here, we apply nuclear magnetic resonance (NMR) pulsed field gradient (PFG) diffusion measurements in a novel way to detect increased motion of disconnected oil ganglia. The data are acquired directly from a three-dimensional (3D) opaque porous structure (sandstone) when viscoelastic fluctuations are expected to be present in the continuous phase. The measured increase in motion of trapped ganglia provides unequivocal evidence of fluctuations in the flowing phase in a fully complex 3D system. This work provides direct evidence of elastic turbulence in a realistic reservoir rock - a measurement that cannot be readily achieved by conventional laboratory methods. We support the NMR data with optical microscopy studies of fluctuating ganglia in simple two-dimensional (2D) microfluidic networks, with consistent apparent rheological behaviour of the aqueous phase, to provide conclusive evidence of elastic turbulence in the 3D structure and hence validate the proposed flow-fluctuation mechanism for enhanced oil recovery.

Three-Dimensional Flow Separation Induced by a Model Vocal Fold Polyp

Science.gov (United States)

Stewart, Kelley C.; Erath, Byron D.; Plesniak, Michael W.

2012-11-01

The fluid-structure energy exchange process for normal speech has been studied extensively, but it is not well understood for pathological conditions. Polyps and nodules, which are geometric abnormalities that form on the medial surface of the vocal folds, can disrupt vocal fold dynamics and thus can have devastating consequences on a patient's ability to communicate. A recent in-vitro investigation of a model polyp in a driven vocal fold apparatus demonstrated that such a geometric abnormality considerably disrupts the glottal jet behavior and that this flow field adjustment was a likely reason for the severe degradation of the vocal quality in patients. Understanding of the formation and propagation of vortical structures from a geometric protuberance, and their subsequent impact on the aerodynamic loadings that drive vocal fold dynamic, is a critical component in advancing the treatment of this pathological condition. The present investigation concerns the three-dimensional flow separation induced by a wall-mounted prolate hemispheroid with a 2:1 aspect ratio in cross flow, i.e. a model vocal fold polyp. Unsteady three-dimensional flow separation and its impact of the wall pressure loading are examined using skin friction line visualization and wall pressure measurements. Supported by the National Science Foundation, Grant No. CBET-1236351 and GW Center for Biomimetics and Bioinspired Engineering (COBRE).

Automated voxel-based analysis of brain perfusion SPECT for vasospasm after subarachnoid haemorrhage

International Nuclear Information System (INIS)

Iwabuchi, S.; Yokouchi, T.; Hayashi, M.; Kimura, H.; Tomiyama, A.; Hirata, Y.; Saito, N.; Harashina, J.; Nakayama, H.; Sato, K.; Aoki, K.; Samejima, H.; Ueda, M.; Terada, H.; Hamazaki, K.

2008-01-01

We evaluated regional cerebral blood flow (rCBF) during vasospasm after subarachnoid haemorrhage ISAH) using automated voxel-based analysis of brain perfusion single-photon emission computed tomography (SPELT). Brain perfusion SPECT was performed 7 to 10 days after onset of SAH. Automated voxel-based analysis of SPECT used a Z-score map that was calculated by comparing the patients data with a control database. In cases where computed tomography (CT) scans detected an ischemic region due to vasospasm, automated voxel-based analysis of brain perfusion SPECT revealed dramatically reduced rCBF (Z-score ≤ -4). No patients with mildly or moderately diminished rCBF (Z-score > -3) progressed to cerebral infarction. Some patients with a Z-score < -4 did not progress to cerebral infarction after active treatment with a angioplasty. Three-dimensional images provided detailed anatomical information and helped us to distinguish surgical sequelae from vasospasm. In conclusion, automated voxel-based analysis of brain perfusion SPECT using a Z-score map is helpful in evaluating decreased rCBF due to vasospasm. (author)

BioXTAS RAW, a software program for high-throughput automated small-angle X-ray scattering data reduction and preliminary analysis

DEFF Research Database (Denmark)

Nielsen, S.S.; Toft, K.N.; Snakenborg, Detlef

2009-01-01

A fully open source software program for automated two-dimensional and one-dimensional data reduction and preliminary analysis of isotropic small-angle X-ray scattering (SAXS) data is presented. The program is freely distributed, following the open-source philosophy, and does not rely on any...... commercial software packages. BioXTAS RAW is a fully automated program that, via an online feature, reads raw two-dimensional SAXS detector output files and processes and plots data as the data files are created during measurement sessions. The software handles all steps in the data reduction. This includes...... mask creation, radial averaging, error bar calculation, artifact removal, normalization and q calibration. Further data reduction such as background subtraction and absolute intensity scaling is fast and easy via the graphical user interface. BioXTAS RAW also provides preliminary analysis of one...

Single calibration multiplane stereo-PIV: the effect of mitral valve orientation on three-dimensional flow in a left ventricle model

Science.gov (United States)

Saaid, Hicham; Segers, Patrick; Novara, Matteo; Claessens, Tom; Verdonck, Pascal

2018-03-01

The characterization of flow patterns in the left ventricle may help the development and interpretation of flow-based parameters of cardiac function and (patho-)physiology. Yet, in vivo visualization of highly dynamic three-dimensional flow patterns in an opaque and moving chamber is a challenging task. This has been shown in several recent multidisciplinary studies where in vivo imaging methods are often complemented by in silico solutions, or by in vitro methods. Because of its distinctive features, particle image velocimetry (PIV) has been extensively used to investigate flow dynamics in the cardiovascular field. However, full volumetric PIV data in a dynamically changing geometry such as the left ventricle remain extremely scarce, which justifies the present study. An investigation of the left ventricle flow making use of a customized cardiovascular simulator is presented; a multiplane scanning-stereoscopic PIV setup is used, which allows for the measurement of independent planes across the measurement volume. Due to the accuracy in traversing the illumination and imaging systems, the present setup allows to reconstruct the flow in a 3D volume performing only one single calibration. The effects of the orientation of a prosthetic mitral valve in anatomical and anti-anatomical configurations have been investigated during the diastolic filling time. The measurement is performed in a phase-locked manner; the mean velocity components are presented together with the vorticity and turbulent kinetic energy maps. The reconstructed 3D flow structures downstream the bileaflet mitral valve are shown, which provides additional insight of the highly three-dimensional flow.

Identifying three-dimensional nested groundwater flow systems in a Tóthian basin

Science.gov (United States)

Wang, Xu-Sheng; Wan, Li; Jiang, Xiao-Wei; Li, Hailong; Zhou, Yangxiao; Wang, Junzhi; Ji, Xiaohui

2017-10-01

Nested groundwater flow systems have been revealed in Tóth's theory as the structural property of basin-scale groundwater circulation but were only well known with two-dimensional (2D) profile models. The method of searching special streamlines across stagnation points for partitioning flow systems, which has been successfully applied in the 2D models, has never been implemented for three-dimensional (3D) Tóthian basins because of the difficulty in solving the dual stream functions. Alternatively, a new method is developed to investigate 3D nested groundwater flow systems without determination of stagnation points. Connective indices are defined to quantify the connection between individual recharge and discharge zones along streamlines. Groundwater circulation cells (GWCCs) are identified according to the distribution of the connective indices and then grouped into local, intermediate and regional flow systems. This method requires existing solution of the flow velocity vector and is implemented via particle tracking technique. It is applied in a hypothetical 3D Tóthian basin with an analytical solution of the flow field and in a real-world basin with a numerical modeling approach. Different spatial patterns of flow systems compared to 2D profile models are found. The outcrops boundaries of GWCCs on water table may significantly deviate from and are not parallel to the nearby water table divides. Topological network is proposed to represent the linked recharge-discharge zones through closed and open GWCCs. Sensitivity analysis indicates that the development of GWCCs depends on the basin geometry, hydraulic parameters and water table shape.

Two-dimensional numerical simulation of flow around three-stranded rope

Science.gov (United States)

Wang, Xinxin; Wan, Rong; Huang, Liuyi; Zhao, Fenfang; Sun, Peng

2016-08-01

Three-stranded rope is widely used in fishing gear and mooring system. Results of numerical simulation are presented for flow around a three-stranded rope in uniform flow. The simulation was carried out to study the hydrodynamic characteristics of pressure and velocity fields of steady incompressible laminar and turbulent wakes behind a three-stranded rope. A three-cylinder configuration and single circular cylinder configuration are used to model the three-stranded rope in the two-dimensional simulation. The governing equations, Navier-Stokes equations, are solved by using two-dimensional finite volume method. The turbulence flow is simulated using Standard κ-ɛ model and Shear-Stress Transport κ-ω (SST) model. The drag of the three-cylinder model and single cylinder model is calculated for different Reynolds numbers by using control volume analysis method. The pressure coefficient is also calculated for the turbulent model and laminar model based on the control surface method. From the comparison of the drag coefficient and the pressure of the single cylinder and three-cylinder models, it is found that the drag coefficients of the three-cylinder model are generally 1.3-1.5 times those of the single circular cylinder for different Reynolds numbers. Comparing the numerical results with water tank test data, the results of the three-cylinder model are closer to the experiment results than the single cylinder model results.

Decision Making In A High-Tech World: Automation Bias and Countermeasures

Science.gov (United States)

Mosier, Kathleen L.; Skitka, Linda J.; Burdick, Mark R.; Heers, Susan T.; Rosekind, Mark R. (Technical Monitor)

1996-01-01

Automated decision aids and decision support systems have become essential tools in many high-tech environments. In aviation, for example, flight management systems computers not only fly the aircraft, but also calculate fuel efficient paths, detect and diagnose system malfunctions and abnormalities, and recommend or carry out decisions. Air Traffic Controllers will soon be utilizing decision support tools to help them predict and detect potential conflicts and to generate clearances. Other fields as disparate as nuclear power plants and medical diagnostics are similarly becoming more and more automated. Ideally, the combination of human decision maker and automated decision aid should result in a high-performing team, maximizing the advantages of additional cognitive and observational power in the decision-making process. In reality, however, the presence of these aids often short-circuits the way that even very experienced decision makers have traditionally handled tasks and made decisions, and introduces opportunities for new decision heuristics and biases. Results of recent research investigating the use of automated aids have indicated the presence of automation bias, that is, errors made when decision makers rely on automated cues as a heuristic replacement for vigilant information seeking and processing. Automation commission errors, i.e., errors made when decision makers inappropriately follow an automated directive, or automation omission errors, i.e., errors made when humans fail to take action or notice a problem because an automated aid fails to inform them, can result from this tendency. Evidence of the tendency to make automation-related omission and commission errors has been found in pilot self reports, in studies using pilots in flight simulations, and in non-flight decision making contexts with student samples. Considerable research has found that increasing social accountability can successfully ameliorate a broad array of cognitive biases and

Stationary solution of the Rayleigh-Taylor instability for spatially periodic flows: questions of uniqueness, dimensionality, and universality

International Nuclear Information System (INIS)

Abarzhi, S.I.

1996-01-01

The stationary solutions of the Rayleigh-Taylor instability for spatially periodic flows with general symmetry are investigated here for the first time. The existence of a set of stationary solutions is established. The question of its dimensionality in function space is resolved on the basis of an analysis of the symmetry of the initial perturbation. The interrelationship between the dimensionality of the solution set and the symmetry of the flow is found. The dimensionality of the solution set is established for flows invariant with respect to one of five symmorphic two-dimensional groups. The nonuniversal character of the set of stationary solutions of the Rayleigh-Taylor instability is demonstrated. For flows in a tube, on the contrary, universality of the solution set, along with its independence of the symmetry of the initial perturbation, is assumed. The problem of the free boundary in the Rayleigh-Taylor instability is solved in the first two approximations, and their convergence is investigated. The dependence of the velocity and Fourier harmonics on the parameters of the problem is found. Possible symmetry violations of the flow are analyzed. Limits to previously studied cases are investigated, and their accuracy is established. Questions of the stability of the solutions obtained and the possibility of a physically correct statement of the problem are discussed

Numerical modeling and investigation of two-phase reactive flow in a high-low pressure chambers system

International Nuclear Information System (INIS)

Cheng, Cheng; Zhang, Xiaobing

2016-01-01

Highlights: • A novel two-dimensional two-phase flow model is established for the high-low pressure chambers system. • A strong packing of particles is observed at the projectile base and will cause the pressure to rise faster. • Different length–diameter ratios can affect the flow behavior through the vent-holes obviously. • The muzzle velocity decreases with the length–diameter ratio of the high-pressure chamber. - Abstract: A high-low pressure chambers system is proposed to meet the demands of low launch acceleration for informative equipment in many special fields such as Aeronautics, Astronautics and Weaponry. A two-dimensional two-phase flow numerical model is established to describe the complex physical process based on a modified two-fluid theory, which takes into account gas production, interphase drag, intergranular stress, and heat transfer between two phases. In order to reduce the computational cost, the parameters in the high-pressure chamber at the instant the vent-holes open are calculated by the zero-dimensional model as the initial conditions for the two-phase flow simulation in the high-low pressure chambers system. The simulation results reveal good agreement with the experiments and the launch acceleration of a projectile can be improved by this system. The propellant particles can be tracked clearly in both chambers and a strong packing of particles at the base of projectile will cause the pressure to rise faster than at other areas both in the axis and radial directions. The length–diameter ratio of the high-pressure chamber (a typical multi-dimensional parameter) is investigated. Different length–diameter ratios can affect the maximum pressure drop and the loss of total pressure impulse through the vent-hole, then the muzzle velocity and the launch acceleration of projectiles can be influenced directly. This article puts forward a new prediction tool for the understanding and design of transient processes in high-low pressure

A novel flow injection chemiluminescence method for automated and miniaturized determination of phenols in smoked food samples.

Science.gov (United States)

Vakh, Christina; Evdokimova, Ekaterina; Pochivalov, Aleksei; Moskvin, Leonid; Bulatov, Andrey

2017-12-15

An easily performed fully automated and miniaturized flow injection chemiluminescence (CL) method for determination of phenols in smoked food samples has been proposed. This method includes the ultrasound assisted solid-liquid extraction coupled with gas-diffusion separation of phenols from smoked food sample and analytes absorption into a NaOH solution in a specially designed gas-diffusion cell. The flow system was designed to focus on automation and miniaturization with minimal sample and reagent consumption by inexpensive instrumentation. The luminol - N-bromosuccinimide system in an alkaline medium was used for the CL determination of phenols. The limit of detection of the proposed procedure was 3·10 -8 ·molL -1 (0.01mgkg -1 ) in terms of phenol. The presented method demonstrated to be a good tool for easy, rapid and cost-effective point-of-need screening phenols in smoked food samples. Copyright © 2017 Elsevier Ltd. All rights reserved.

Three dimensional numerical investigation of flow mixing in curved tubes and mass transfer in T-channel junction

International Nuclear Information System (INIS)

Pandey, Pradeep; Nayak, A.K.; Vijayan, P.K.

2014-01-01

Three dimensional flow patterns appearing in geometries such as curved pipes and T-channel junctions have important applications and are attractive for research. Unlike the flow in a straight tube, fluid motion in a curved tube is not parallel to the axis of bend, owing to the presence of centrifugal effects. It is characterized by a secondary flow in a cross-sectional plane normal to the main flow. Consequently, secondary flow separation near the inner wall is observed in the developing region. The strength of the secondary flow is greatly influenced by the curvature ratio and in turn, a non-dimensional parameter called the Dean Number. Secondary flow increases flow resistance, resulting in a larger pressure drop along the bend. The location of the maximum axial velocity gets shifted towards the outer wall. Flow in a T-channel junction is also a configuration of great significance. The simulations of the present work show that flow at low Reynolds numbers (Re ≤ 115) is steady and symmetric. For low Reynolds numbers, flow in the downstream channel remains highly segregated about the centerline. The appearance of vortices in the T-channel junction does little to redistribute concentration when flow remains symmetric. With increasing Reynolds number, transition takes place towards asymmetric flow. The incoming flow field gets redistributed at the center-plane and the dividing streamline becomes increasingly distorted. The flow field is characterized by thin elongated fluid interfaces across which momentum diffusion takes place. Flow at higher Reynolds numbers (Re ≥ 250) becomes unsteady in which unstable stagnation stream traces move periodically leftward and rightward at top and bottom walls. Trajectories of mass-less particles show greater dwelling in the junction as compared to those of finite mass particle. The numerical simulation is carried out in the present work using ANUPRAVAHA, a general purpose CFD solver developed at IIT Kanpur in collaboration with

Separation prediction in two dimensional boundary layer flows using artificial neural networks

International Nuclear Information System (INIS)

Sabetghadam, F.; Ghomi, H.A.

2003-01-01

In this article, the ability of artificial neural networks in prediction of separation in steady two dimensional boundary layer flows is studied. Data for network training is extracted from numerical solution of an ODE obtained from Von Karman integral equation with approximate one parameter Pohlhousen velocity profile. As an appropriate neural network, a two layer radial basis generalized regression artificial neural network is used. The results shows good agreements between the overall behavior of the flow fields predicted by the artificial neural network and the actual flow fields for some cases. The method easily can be extended to unsteady separation and turbulent as well as compressible boundary layer flows. (author)

Three-dimensional flow structure and patterns of bed shear stress in an evolving compound meander bend

Science.gov (United States)

Engel, Frank; Rhoads, Bruce L.

2016-01-01

Compound meander bends with multiple lobes of maximum curvature are common in actively evolving lowland rivers. Interaction among spatial patterns of mean flow, turbulence, bed morphology, bank failures and channel migration in compound bends is poorly understood. In this paper, acoustic Doppler current profiler (ADCP) measurements of the three-dimensional (3D) flow velocities in a compound bend are examined to evaluate the influence of channel curvature and hydrologic variability on the structure of flow within the bend. Flow structure at various flow stages is related to changes in bed morphology over the study timeframe. Increases in local curvature within the upstream lobe of the bend reduce outer bank velocities at morphologically significant flows, creating a region that protects the bank from high momentum flow and high bed shear stresses. The dimensionless radius of curvature in the upstream lobe is one-third less than that of the downstream lobe, with average bank erosion rates less than half of the erosion rates for the downstream lobe. Higher bank erosion rates within the downstream lobe correspond to the shift in a core of high velocity and bed shear stresses toward the outer bank as flow moves through the two lobes. These erosion patterns provide a mechanism for continued migration of the downstream lobe in the near future. Bed material size distributions within the bend correspond to spatial patterns of bed shear stress magnitudes, indicating that bed material sorting within the bend is governed by bed shear stress. Results suggest that patterns of flow, sediment entrainment, and planform evolution in compound meander bends are more complex than in simple meander bends. Moreover, interactions among local influences on the flow, such as woody debris, local topographic steering, and locally high curvature, tend to cause compound bends to evolve toward increasing planform complexity over time rather than stable configurations.

An incompressible two-dimensional multiphase particle-in-cell model for dense particle flows

Energy Technology Data Exchange (ETDEWEB)

Snider, D.M. [SAIC, Albuquerque, NM (United States); O`Rourke, P.J. [Los Alamos National Lab., NM (United States); Andrews, M.J. [Texas A and M Univ., College Station, TX (United States). Dept. of Mechanical Engineering

1997-06-01

A two-dimensional, incompressible, multiphase particle-in-cell (MP-PIC) method is presented for dense particle flows. The numerical technique solves the governing equations of the fluid phase using a continuum model and those of the particle phase using a Lagrangian model. Difficulties associated with calculating interparticle interactions for dense particle flows with volume fractions above 5% have been eliminated by mapping particle properties to a Eulerian grid and then mapping back computed stress tensors to particle positions. This approach utilizes the best of Eulerian/Eulerian continuum models and Eulerian/Lagrangian discrete models. The solution scheme allows for distributions of types, sizes, and density of particles, with no numerical diffusion from the Lagrangian particle calculations. The computational method is implicit with respect to pressure, velocity, and volume fraction in the continuum solution thus avoiding courant limits on computational time advancement. MP-PIC simulations are compared with one-dimensional problems that have analytical solutions and with two-dimensional problems for which there are experimental data.

A two-dimensionally coincident second difference cosmic ray spike removal method for the fully automated processing of Raman spectra.

Science.gov (United States)

Schulze, H Georg; Turner, Robin F B

2014-01-01

Charge-coupled device detectors are vulnerable to cosmic rays that can contaminate Raman spectra with positive going spikes. Because spikes can adversely affect spectral processing and data analyses, they must be removed. Although both hardware-based and software-based spike removal methods exist, they typically require parameter and threshold specification dependent on well-considered user input. Here, we present a fully automated spike removal algorithm that proceeds without requiring user input. It is minimally dependent on sample attributes, and those that are required (e.g., standard deviation of spectral noise) can be determined with other fully automated procedures. At the core of the method is the identification and location of spikes with coincident second derivatives along both the spectral and spatiotemporal dimensions of two-dimensional datasets. The method can be applied to spectra that are relatively inhomogeneous because it provides fairly effective and selective targeting of spikes resulting in minimal distortion of spectra. Relatively effective spike removal obtained with full automation could provide substantial benefits to users where large numbers of spectra must be processed.

One-dimensional pulse-flow modeling of a twin-scroll turbine

International Nuclear Information System (INIS)

Chiong, M.S.; Rajoo, S.; Romagnoli, A.; Costall, A.W.; Martinez-Botas, R.F.

2016-01-01

This paper presents a revised one-dimensional (1D) pulse flow modeling of twin-scroll turbocharger turbine under pulse flow operating conditions. The proposed methodology in this paper provides further consideration for the turbine partial admission performance during model characterization. This gives rise to significant improvement on the model pulse flow prediction quality compared to the previous model. The results show that a twin-scroll turbine is not operating at full admission throughout the in-phase pulse flow conditions. Instead, they are operating at unequal admission state due to disparity in the magnitude of turbine inlet flow. On the other hand, during out-of-phase pulse flow, a twin-scroll turbine is working at partial admission state for majority of the pulse cycle. An amended mathematical correlation in calculating the twin-scroll turbine partial admission characteristics is also presented in the paper. The impact of its accuracy on the pulse flow model prediction is explored. - Highlights: • Paper presents a 1D modeling for twin-scroll turbine under pulsating flow. • Predicted pulse pressure propagation is in good agreement with experimental data. • A methodology is proposed to consider the turbine partial admission performance. • Prediction shows twin-scroll turbine operates at unequal admission during in-phase flow. • During out-of-phase flow a twin-scroll turbine mainly operates at partial admission.

Impact of magnetic field in three-dimensional flow of Sisko nanofluid with convective condition

Energy Technology Data Exchange (ETDEWEB)

Hayat, T. [Department of Mathematics, Quaid-I-Azam University, Islamabad 44000 (Pakistan); Nonlinear Analysis and Applied Mathematics (NAAM) Research Group, Department of Mathematics, Faculty of Science, King Abdulaziz University, P.O. Box 80203, Jeddah 21589 (Saudi Arabia); Muhammad, Taseer, E-mail: taseer_qau@yahoo.com [Department of Mathematics, Quaid-I-Azam University, Islamabad 44000 (Pakistan); Ahmad, B. [Nonlinear Analysis and Applied Mathematics (NAAM) Research Group, Department of Mathematics, Faculty of Science, King Abdulaziz University, P.O. Box 80203, Jeddah 21589 (Saudi Arabia); Shehzad, S.A. [Department of Mathematics, Comsats Institute of Information Technology, Sahiwal 57000 (Pakistan)

2016-09-01

This communication addresses the magnetohydrodynamic (MHD) three dimensional flow of Sisko nanofluid bounded by a surface stretched bidirectionally. Nanofluid model includes the Brownian motion and thermophoresis. Heat transfer through convective condition is discussed. Developed condition with the zero nanoparticles mass flux at the surface is implemented. The governing problems subject to boundary layer approximations are computed for the convergent series solutions. Effects of interesting flow parameters on the temperature and nanoparticles concentration distributions are studied and discussed. Skin friction coefficients and the local Nusselt number are computed and analyzed. - Highlights: • Three-dimensional flow of Sisko nanofluid is modeled. • Uniform applied magnetic field is adopted. • Brownian motion and thermophoresis effects are accounted. • Heat transfer convective condition is utilized. • Recently constructed condition with zero nanoparticles mass flux is implemented.

Unsteady free surface flow in porous media: One-dimensional model equations including vertical effects and seepage face

Science.gov (United States)

Di Nucci, Carmine

2018-05-01

This note examines the two-dimensional unsteady isothermal free surface flow of an incompressible fluid in a non-deformable, homogeneous, isotropic, and saturated porous medium (with zero recharge and neglecting capillary effects). Coupling a Boussinesq-type model for nonlinear water waves with Darcy's law, the two-dimensional flow problem is solved using one-dimensional model equations including vertical effects and seepage face. In order to take into account the seepage face development, the system equations (given by the continuity and momentum equations) are completed by an integral relation (deduced from the Cauchy theorem). After testing the model against data sets available in the literature, some numerical simulations, concerning the unsteady flow through a rectangular dam (with an impermeable horizontal bottom), are presented and discussed.

Series Solution for Steady Three-Dimensional Flow due to Spraying on Inclined Spinning Disk by Homotopy Perturbation Method

Directory of Open Access Journals (Sweden)

Saeed Dinarvand

2012-01-01

Full Text Available The steady three-dimensional flow of condensation or spraying on inclined spinning disk is studied analytically. The governing nonlinear equations and their associated boundary conditions are transformed into the system of nonlinear ordinary differential equations. The series solution of the problem is obtained by utilizing the homotopy perturbation method (HPM. The velocity and temperature profiles are shown and the influence of Prandtl number on the heat transfer and Nusselt number is discussed in detail. The validity of our solutions is verified by the numerical results. Unlike free surface flows on an incline, this through flow is highly affected by the spray rate and the rotation of the disk.

Dimensional flow and fuzziness in quantum gravity: Emergence of stochastic spacetime

Directory of Open Access Journals (Sweden)

Gianluca Calcagni

2017-10-01

Full Text Available We show that the uncertainty in distance and time measurements found by the heuristic combination of quantum mechanics and general relativity is reproduced in a purely classical and flat multi-fractal spacetime whose geometry changes with the probed scale (dimensional flow and has non-zero imaginary dimension, corresponding to a discrete scale invariance at short distances. Thus, dimensional flow can manifest itself as an intrinsic measurement uncertainty and, conversely, measurement-uncertainty estimates are generally valid because they rely on this universal property of quantum geometries. These general results affect multi-fractional theories, a recent proposal related to quantum gravity, in two ways: they can fix two parameters previously left free (in particular, the value of the spacetime dimension at short scales and point towards a reinterpretation of the ultraviolet structure of geometry as a stochastic foam or fuzziness. This is also confirmed by a correspondence we establish between Nottale scale relativity and the stochastic geometry of multi-fractional models.

Dimensional flow and fuzziness in quantum gravity: Emergence of stochastic spacetime

International Nuclear Information System (INIS)

Calcagni, Gianluca; Ronco, Michele

2017-01-01

We show that the uncertainty in distance and time measurements found by the heuristic combination of quantum mechanics and general relativity is reproduced in a purely classical and flat multi-fractal spacetime whose geometry changes with the probed scale (dimensional flow) and has non-zero imaginary dimension, corresponding to a discrete scale invariance at short distances. Thus, dimensional flow can manifest itself as an intrinsic measurement uncertainty and, conversely, measurement-uncertainty estimates are generally valid because they rely on this universal property of quantum geometries. These general results affect multi-fractional theories, a recent proposal related to quantum gravity, in two ways: they can fix two parameters previously left free (in particular, the value of the spacetime dimension at short scales) and point towards a reinterpretation of the ultraviolet structure of geometry as a stochastic foam or fuzziness. This is also confirmed by a correspondence we establish between Nottale scale relativity and the stochastic geometry of multi-fractional models.

Dimensional flow and fuzziness in quantum gravity: Emergence of stochastic spacetime

Science.gov (United States)

Calcagni, Gianluca; Ronco, Michele

2017-10-01

We show that the uncertainty in distance and time measurements found by the heuristic combination of quantum mechanics and general relativity is reproduced in a purely classical and flat multi-fractal spacetime whose geometry changes with the probed scale (dimensional flow) and has non-zero imaginary dimension, corresponding to a discrete scale invariance at short distances. Thus, dimensional flow can manifest itself as an intrinsic measurement uncertainty and, conversely, measurement-uncertainty estimates are generally valid because they rely on this universal property of quantum geometries. These general results affect multi-fractional theories, a recent proposal related to quantum gravity, in two ways: they can fix two parameters previously left free (in particular, the value of the spacetime dimension at short scales) and point towards a reinterpretation of the ultraviolet structure of geometry as a stochastic foam or fuzziness. This is also confirmed by a correspondence we establish between Nottale scale relativity and the stochastic geometry of multi-fractional models.

Soap film flows: Statistics of two-dimensional turbulence

International Nuclear Information System (INIS)

Vorobieff, P.; Rivera, M.; Ecke, R.E.

1999-01-01

Soap film flows provide a very convenient laboratory model for studies of two-dimensional (2-D) hydrodynamics including turbulence. For a gravity-driven soap film channel with a grid of equally spaced cylinders inserted in the flow, we have measured the simultaneous velocity and thickness fields in the irregular flow downstream from the cylinders. The velocity field is determined by a modified digital particle image velocimetry method and the thickness from the light scattered by the particles in the film. From these measurements, we compute the decay of mean energy, enstrophy, and thickness fluctuations with downstream distance, and the structure functions of velocity, vorticity, thickness fluctuation, and vorticity flux. From these quantities we determine the microscale Reynolds number of the flow R λ ∼100 and the integral and dissipation scales of 2D turbulence. We also obtain quantitative measures of the degree to which our flow can be considered incompressible and isotropic as a function of downstream distance. We find coarsening of characteristic spatial scales, qualitative correspondence of the decay of energy and enstrophy with the Batchelor model, scaling of energy in k space consistent with the k -3 spectrum of the Kraichnan endash Batchelor enstrophy-scaling picture, and power-law scalings of the structure functions of velocity, vorticity, vorticity flux, and thickness. These results are compared with models of 2-D turbulence and with numerical simulations. copyright 1999 American Institute of Physics

Spatial statistics of magnetic field in two-dimensional chaotic flow in the resistive growth stage

Energy Technology Data Exchange (ETDEWEB)

Kolokolov, I.V., E-mail: igor.kolokolov@gmail.com [Landau Institute for Theoretical Physics RAS, 119334, Kosygina 2, Moscow (Russian Federation); NRU Higher School of Economics, 101000, Myasnitskaya 20, Moscow (Russian Federation)

2017-03-18

The correlation tensors of magnetic field in a two-dimensional chaotic flow of conducting fluid are studied. It is shown that there is a stage of resistive evolution where the field correlators grow exponentially with time. The two- and four-point field correlation tensors are computed explicitly in this stage in the framework of Batchelor–Kraichnan–Kazantsev model. They demonstrate strong temporal intermittency of the field fluctuations and high level of non-Gaussianity in spatial field distribution.

The experimental study of hydrodynamic characteristics of the overland flow on a slope with three-dimensional Geomat

Science.gov (United States)

Wang, Guang-yue; Sun, Guo-rui; Li, Jian-kang; Li, Jiong

2018-02-01

The hydrodynamic characteristics of the overland flow on a slope with a three-dimensional Geomat are studied for different rainfall intensities and slope gradients. The rainfall intensity is adjusted in the rainfall simulation system. It is shown that the velocity of the overland flow has a strong positive correlation with the slope length and the rainfall intensity, the scour depth decreases with the increase of the slope gradient for a given rainfall intensity, and the scour depth increases with the increase of the rainfall intensity for a given slope gradient, the overland flow starts with a transitional flow on the top and finishes with a turbulent flow on the bottom on the slope with the three-dimensional Geomat for different rainfall intensities and slope gradients, the resistance coefficient and the turbulent flow Reynolds number are in positively related logarithmic functions, the resistance coefficient and the slope gradient are in positively related power functions, and the trend becomes leveled with the increase of the rainfall intensity. This study provides some important theoretical insight for further studies of the hydrodynamic process of the erosion on the slope surface with a three-dimensional Geomat.

A Shell Multi-dimensional Hierarchical Cubing Approach for High-Dimensional Cube

Science.gov (United States)

Zou, Shuzhi; Zhao, Li; Hu, Kongfa

The pre-computation of data cubes is critical for improving the response time of OLAP systems and accelerating data mining tasks in large data warehouses. However, as the sizes of data warehouses grow, the time it takes to perform this pre-computation becomes a significant performance bottleneck. In a high dimensional data warehouse, it might not be practical to build all these cuboids and their indices. In this paper, we propose a shell multi-dimensional hierarchical cubing algorithm, based on an extension of the previous minimal cubing approach. This method partitions the high dimensional data cube into low multi-dimensional hierarchical cube. Experimental results show that the proposed method is significantly more efficient than other existing cubing methods.

A two-dimensional numerical study of the flow inside the combustion chamber of a motored rotary engine

Science.gov (United States)

Shih, T. I-P.; Yang, S. L.; Schock, H. J.

1986-01-01

A numerical study was performed to investigate the unsteady, multidimensional flow inside the combustion chambers of an idealized, two-dimensional, rotary engine under motored conditions. The numerical study was based on the time-dependent, two-dimensional, density-weighted, ensemble-averaged conservation equations of mass, species, momentum, and total energy valid for two-component ideal gas mixtures. The ensemble-averaged conservation equations were closed by a K-epsilon model of turbulence. This K-epsilon model of turbulence was modified to account for some of the effects of compressibility, streamline curvature, low-Reynolds number, and preferential stress dissipation. Numerical solutions to the conservation equations were obtained by the highly efficient implicit-factored method of Beam and Warming. The grid system needed to obtain solutions were generated by an algebraic grid generation technique based on transfinite interpolation. Results of the numerical study are presented in graphical form illustrating the flow patterns during intake, compression, gaseous fuel injection, expansion, and exhaust.

A two-dimensional numerical study of the flow inside the combustion chambers of a motored rotary engine

Science.gov (United States)

Shih, T. I. P.; Yang, S. L.; Schock, H. J.

1986-01-01

A numerical study was performed to investigate the unsteady, multidimensional flow inside the combustion chambers of an idealized, two-dimensional, rotary engine under motored conditions. The numerical study was based on the time-dependent, two-dimensional, density-weighted, ensemble-averaged conservation equations of mass, species, momentum, and total energy valid for two-component ideal gas mixtures. The ensemble-averaged conservation equations were closed by a K-epsilon model of turbulence. This K-epsilon model of turbulence was modified to account for some of the effects of compressibility, streamline curvature, low-Reynolds number, and preferential stress dissipation. Numerical solutions to the conservation equations were obtained by the highly efficient implicit-factored method of Beam and Warming. The grid system needed to obtain solutions were generated by an algebraic grid generation technique based on transfinite interpolation. Results of the numerical study are presented in graphical form illustrating the flow patterns during intake, compression, gaseous fuel injection, expansion, and exhaust.

Two dimensional numerical model for steam--water flow in a sudden contraction

International Nuclear Information System (INIS)

Crowe, C.T.; Choi, H.N.

1976-01-01

A computational model developed for two-dimensional dispersed two-phase flows is applied to steam--water flow in a sudden contraction. The calculational scheme utilizes the cellular approach in which each cell is regarded as a control volume and the droplets are regarded as sources of mass, momentum and energy to the conveying (steam) phase. The predictions show how droplets channel in the entry region and affect the velocity and pressure distributions along the duct

Magnetic field effect on a three-dimensional mixed convective flow ...

African Journals Online (AJOL)

A uniform magnetic field is assumed to be applied transversely to the direction of the free stream. The expressions for skin friction at the plate in the direction of the main flow and the rate of heat transfer and mass transfer from the plate to the fluid are obtained in non-dimensional form. The amplitudes of the perturbed parts of ...

Use of flow cytometry for high-throughput cell population estimates in fixed brain tissue

Directory of Open Access Journals (Sweden)

Nicole A Young

2012-07-01

Full Text Available The numbers and types of cells in an area of cortex define its function. Therefore it is essential to characterize the numbers and distributions of total cells in areas of the cortex, as well as to identify numbers of subclasses of neurons and glial cells. To date, the large size of the primate brain and the lack of innovation in cell counting methods have been a roadblock to obtaining high-resolution maps of cell and neuron density across the cortex in humans and non-human primates. Stereological counting methods and the isotropic fractionator are valuable tools for estimating cell numbers, but are better suited to smaller, well-defined brain structures or to cortex as a whole. In the present study, we have extended our flow-cytometry based counting method, the flow fractionator (Collins et al., 2010a, to include high-throughput total cell population estimates in homogenized cortical samples. We demonstrate that our method produces consistent, accurate and repeatable cell estimates quickly. The estimates we report are in excellent agreement with estimates for the same samples obtained using a Neubauer chamber and a fluorescence microscope. We show that our flow cytometry-based method for total cell estimation in homogenized brain tissue is more efficient and more precise than manual counting methods. The addition of automated nuclei counting to our flow fractionator method allows for a fully automated, rapid characterization of total cells and neuronal and non-neuronal populations in human and non-human primate brains, providing valuable data to further our understanding of the functional organization of normal, aging and diseased brains.

Fully Automated On-Chip Imaging Flow Cytometry System with Disposable Contamination-Free Plastic Re-Cultivation Chip

Directory of Open Access Journals (Sweden)

Tomoyuki Kaneko

2011-06-01

Full Text Available We have developed a novel imaging cytometry system using a poly(methyl methacrylate (PMMA based microfluidic chip. The system was contamination-free, because sample suspensions contacted only with a flammable PMMA chip and no other component of the system. The transparency and low-fluorescence of PMMA was suitable for microscopic imaging of cells flowing through microchannels on the chip. Sample particles flowing through microchannels on the chip were discriminated by an image-recognition unit with a high-speed camera in real time at the rate of 200 event/s, e.g., microparticles 2.5 μm and 3.0 μm in diameter were differentiated with an error rate of less than 2%. Desired cells were separated automatically from other cells by electrophoretic or dielectrophoretic force one by one with a separation efficiency of 90%. Cells in suspension with fluorescent dye were separated using the same kind of microfluidic chip. Sample of 5 μL with 1 × 106 particle/mL was processed within 40 min. Separated cells could be cultured on the microfluidic chip without contamination. The whole operation of sample handling was automated using 3D micropipetting system. These results showed that the novel imaging flow cytometry system is practically applicable for biological research and clinical diagnostics.

Transient response in granular quasi-two-dimensional bounded heap flow.

Science.gov (United States)

Xiao, Hongyi; Ottino, Julio M; Lueptow, Richard M; Umbanhowar, Paul B

2017-10-01

We study the transition between steady flows of noncohesive granular materials in quasi-two-dimensional bounded heaps by suddenly changing the feed rate. In both experiments and simulations, the primary feature of the transition is a wedge of flowing particles that propagates downstream over the rising free surface with a wedge front velocity inversely proportional to the square root of time. An additional longer duration transient process continues after the wedge front reaches the downstream wall. The entire transition is well modeled as a moving boundary problem with a diffusionlike equation derived from local mass balance and a local relation between the flux and the surface slope.

Linking Automated Data Analysis and Visualization with Applications in Developmental Biology and High-Energy Physics

Energy Technology Data Exchange (ETDEWEB)

Ruebel, Oliver [Technical Univ. of Darmstadt (Germany)

2009-11-20

Knowledge discovery from large and complex collections of today's scientific datasets is a challenging task. With the ability to measure and simulate more processes at increasingly finer spatial and temporal scales, the increasing number of data dimensions and data objects is presenting tremendous challenges for data analysis and effective data exploration methods and tools. Researchers are overwhelmed with data and standard tools are often insufficient to enable effective data analysis and knowledge discovery. The main objective of this thesis is to provide important new capabilities to accelerate scientific knowledge discovery form large, complex, and multivariate scientific data. The research covered in this thesis addresses these scientific challenges using a combination of scientific visualization, information visualization, automated data analysis, and other enabling technologies, such as efficient data management. The effectiveness of the proposed analysis methods is demonstrated via applications in two distinct scientific research fields, namely developmental biology and high-energy physics.Advances in microscopy, image analysis, and embryo registration enable for the first time measurement of gene expression at cellular resolution for entire organisms. Analysis of high-dimensional spatial gene expression datasets is a challenging task. By integrating data clustering and visualization, analysis of complex, time-varying, spatial gene expression patterns and their formation becomes possible. The analysis framework MATLAB and the visualization have been integrated, making advanced analysis tools accessible to biologist and enabling bioinformatic researchers to directly integrate their analysis with the visualization. Laser wakefield particle accelerators (LWFAs) promise to be a new compact source of high-energy particles and radiation, with wide applications ranging from medicine to physics. To gain insight into the complex physical processes of particle

Linking Automated Data Analysis and Visualization with Applications in Developmental Biology and High-Energy Physics

International Nuclear Information System (INIS)

Ruebel, Oliver

2009-01-01

Knowledge discovery from large and complex collections of today's scientific datasets is a challenging task. With the ability to measure and simulate more processes at increasingly finer spatial and temporal scales, the increasing number of data dimensions and data objects is presenting tremendous challenges for data analysis and effective data exploration methods and tools. Researchers are overwhelmed with data and standard tools are often insufficient to enable effective data analysis and knowledge discovery. The main objective of this thesis is to provide important new capabilities to accelerate scientific knowledge discovery form large, complex, and multivariate scientific data. The research covered in this thesis addresses these scientific challenges using a combination of scientific visualization, information visualization, automated data analysis, and other enabling technologies, such as efficient data management. The effectiveness of the proposed analysis methods is demonstrated via applications in two distinct scientific research fields, namely developmental biology and high-energy physics.Advances in microscopy, image analysis, and embryo registration enable for the first time measurement of gene expression at cellular resolution for entire organisms. Analysis of high-dimensional spatial gene expression datasets is a challenging task. By integrating data clustering and visualization, analysis of complex, time-varying, spatial gene expression patterns and their formation becomes possible. The analysis framework MATLAB and the visualization have been integrated, making advanced analysis tools accessible to biologist and enabling bioinformatic researchers to directly integrate their analysis with the visualization. Laser wakefield particle accelerators (LWFAs) promise to be a new compact source of high-energy particles and radiation, with wide applications ranging from medicine to physics. To gain insight into the complex physical processes of particle

A Numerical Scheme Based on an Immersed Boundary Method for Compressible Turbulent Flows with Shocks: Application to Two-Dimensional Flows around Cylinders

Directory of Open Access Journals (Sweden)

Shun Takahashi

2014-01-01

Full Text Available A computational code adopting immersed boundary methods for compressible gas-particle multiphase turbulent flows is developed and validated through two-dimensional numerical experiments. The turbulent flow region is modeled by a second-order pseudo skew-symmetric form with minimum dissipation, while the monotone upstream-centered scheme for conservation laws (MUSCL scheme is employed in the shock region. The present scheme is applied to the flow around a two-dimensional cylinder under various freestream Mach numbers. Compared with the original MUSCL scheme, the minimum dissipation enabled by the pseudo skew-symmetric form significantly improves the resolution of the vortex generated in the wake while retaining the shock capturing ability. In addition, the resulting aerodynamic force is significantly improved. Also, the present scheme is successfully applied to moving two-cylinder problems.

High-dimensional covariance estimation with high-dimensional data

CERN Document Server

Pourahmadi, Mohsen

2013-01-01

Methods for estimating sparse and large covariance matrices Covariance and correlation matrices play fundamental roles in every aspect of the analysis of multivariate data collected from a variety of fields including business and economics, health care, engineering, and environmental and physical sciences. High-Dimensional Covariance Estimation provides accessible and comprehensive coverage of the classical and modern approaches for estimating covariance matrices as well as their applications to the rapidly developing areas lying at the intersection of statistics and mac

Steady finite-Reynolds-number flows in three-dimensional collapsible tubes

Science.gov (United States)

Hazel, Andrew L.; Heil, Matthias

2003-07-01

A fully coupled finite-element method is used to investigate the steady flow of a viscous fluid through a thin-walled elastic tube mounted between two rigid tubes. The steady three-dimensional Navier Stokes equations are solved simultaneously with the equations of geometrically nonlinear Kirchhoff Love shell theory. If the transmural (internal minus external) pressure acting on the tube is sufficiently negative then the tube buckles non-axisymmetrically and the subsequent large deformations lead to a strong interaction between the fluid and solid mechanics. The main effect of fluid inertia on the macroscopic behaviour of the system is due to the Bernoulli effect, which induces an additional local pressure drop when the tube buckles and its cross-sectional area is reduced. Thus, the tube collapses more strongly than it would in the absence of fluid inertia. Typical tube shapes and flow fields are presented. In strongly collapsed tubes, at finite values of the Reynolds number, two ’jets‘ develop downstream of the region of strongest collapse and persist for considerable axial distances. For sufficiently high values of the Reynolds number, these jets impact upon the sidewalls and spread azimuthally. The consequent azimuthal transport of momentum dramatically changes the axial velocity profiles, which become approximately uTheta-shaped when the flow enters the rigid downstream pipe. Further convection of momentum causes the development of a ring-shaped velocity profile before the ultimate return to a parabolic profile far downstream.

Grid-converged solution and analysis of the unsteady viscous flow in a two-dimensional shock tube

Science.gov (United States)

Zhou, Guangzhao; Xu, Kun; Liu, Feng

2018-01-01

The flow in a shock tube is extremely complex with dynamic multi-scale structures of sharp fronts, flow separation, and vortices due to the interaction of the shock wave, the contact surface, and the boundary layer over the side wall of the tube. Prediction and understanding of the complex fluid dynamics are of theoretical and practical importance. It is also an extremely challenging problem for numerical simulation, especially at relatively high Reynolds numbers. Daru and Tenaud ["Evaluation of TVD high resolution schemes for unsteady viscous shocked flows," Comput. Fluids 30, 89-113 (2001)] proposed a two-dimensional model problem as a numerical test case for high-resolution schemes to simulate the flow field in a square closed shock tube. Though many researchers attempted this problem using a variety of computational methods, there is not yet an agreed-upon grid-converged solution of the problem at the Reynolds number of 1000. This paper presents a rigorous grid-convergence study and the resulting grid-converged solutions for this problem by using a newly developed, efficient, and high-order gas-kinetic scheme. Critical data extracted from the converged solutions are documented as benchmark data. The complex fluid dynamics of the flow at Re = 1000 are discussed and analyzed in detail. Major phenomena revealed by the numerical computations include the downward concentration of the fluid through the curved shock, the formation of the vortices, the mechanism of the shock wave bifurcation, the structure of the jet along the bottom wall, and the Kelvin-Helmholtz instability near the contact surface. Presentation and analysis of those flow processes provide important physical insight into the complex flow physics occurring in a shock tube.

An Automated Measurement of Ciliary Beating Frequency using a Combined Optical Flow and Peak Detection.

Science.gov (United States)

Kim, Woojae; Han, Tae Hwa; Kim, Hyun Jun; Park, Man Young; Kim, Ku Sang; Park, Rae Woong

2011-06-01

The mucociliary transport system is a major defense mechanism of the respiratory tract. The performance of mucous transportation in the nasal cavity can be represented by a ciliary beating frequency (CBF). This study proposes a novel method to measure CBF by using optical flow. To obtain objective estimates of CBF from video images, an automated computer-based image processing technique is developed. This study proposes a new method based on optical flow for image processing and peak detection for signal processing. We compare the measuring accuracy of the method in various combinations of image processing (optical flow versus difference image) and signal processing (fast Fourier transform [FFT] vs. peak detection [PD]). The digital high-speed video method with a manual count of CBF in slow motion video play, is the gold-standard in CBF measurement. We obtained a total of fifty recorded ciliated sinonasal epithelium images to measure CBF from the Department of Otolaryngology. The ciliated sinonasal epithelium images were recorded at 50-100 frames per second using a charge coupled device camera with an inverted microscope at a magnification of ×1,000. The mean square errors and variance for each method were 1.24, 0.84 Hz; 11.8, 2.63 Hz; 3.22, 1.46 Hz; and 3.82, 1.53 Hz for optical flow (OF) + PD, OF + FFT, difference image [DI] + PD, and DI + FFT, respectively. Of the four methods, PD using optical flow showed the best performance for measuring the CBF of nasal mucosa. The proposed method was able to measure CBF more objectively and efficiently than what is currently possible.

Flow-injection system for automated dissolution testing of isoniazid tablets with chemiluminescence detection.

Science.gov (United States)

Li, B; Zhang, Z; Liu, W

2001-05-30

A simple and sensitive flow-injection chemiluminescence (CL) system for automated dissolution testing is described and evaluated for monitoring of dissolution profiles of isoniazid tablets. The undissolved suspended particles in the dissolved solution were eliminated via on-line filter. The novel CL system of KIO(4)-isoniazid was also investigated. The sampling frequency of the system was 120 h(-1). The dissolution profiles of isoniazid fast-release tablets from three sources were determined, which demonstrates the stability, great sensitivity, large dynamic measuring range and robustness of the system.

Direct numerical simulation of steady state, three dimensional, laminar flow around a wall mounted cube

Science.gov (United States)

Liakos, Anastasios; Malamataris, Nikolaos

2014-11-01

The topology and evolution of flow around a surface mounted cubical object in three dimensional channel flow is examined for low to moderate Reynolds numbers. Direct numerical simulations were performed via a home made parallel finite element code. The computational domain has been designed according to actual laboratory experimental conditions. Analysis of the results is performed using the three dimensional theory of separation. Our findings indicate that a tornado-like vortex by the side of the cube is present for all Reynolds numbers for which flow was simulated. A horse-shoe vortex upstream from the cube was formed at Reynolds number approximately 1266. Pressure distributions are shown along with three dimensional images of the tornado-like vortex and the horseshoe vortex at selected Reynolds numbers. Finally, and in accordance to previous work, our results indicate that the upper limit for the Reynolds number for which steady state results are physically realizable is roughly 2000. Financial support of author NM from the Office of Naval Research Global (ONRG-VSP, N62909-13-1-V016) is acknowledged.

Four-dimensional (4D) flow of the whole heart and great vessels using real-time respiratory self-gating

DEFF Research Database (Denmark)

Uribe, Sergio; Beerbaum, Philipp; Sørensen, Thomas Sangild

2009-01-01

Four-dimensional (4D) flow imaging has been used to study flow patterns and pathophysiology, usually focused on specific thoracic vessels and cardiac chambers. Whole-heart 4D flow at high measurement accuracy covering the entire thoracic cardiovascular system would be desirable to simplify...... and improve hemodynamic assessment. This has been a challenge because compensation of respiratory motion is difficult to achieve, but it is paramount to limit artifacts and improve accuracy. In this work we propose a self-gating technique for respiratory motion-compensation integrated into a whole-heart 4D...... flow acquisition that overcomes these challenges. Flow components are measured in all three directions for each pixel over the complete cardiac cycle, and 1D volume projections are obtained at certain time intervals for respiratory gating in real time during the acquisition. The technique was tested...

Flexible End2End Workflow Automation of Hit-Discovery Research.

Science.gov (United States)

Holzmüller-Laue, Silke; Göde, Bernd; Thurow, Kerstin

2014-08-01

The article considers a new approach of more complex laboratory automation at the workflow layer. The authors purpose the automation of end2end workflows. The combination of all relevant subprocesses-whether automated or manually performed, independently, and in which organizational unit-results in end2end processes that include all result dependencies. The end2end approach focuses on not only the classical experiments in synthesis or screening, but also on auxiliary processes such as the production and storage of chemicals, cell culturing, and maintenance as well as preparatory activities and analyses of experiments. Furthermore, the connection of control flow and data flow in the same process model leads to reducing of effort of the data transfer between the involved systems, including the necessary data transformations. This end2end laboratory automation can be realized effectively with the modern methods of business process management (BPM). This approach is based on a new standardization of the process-modeling notation Business Process Model and Notation 2.0. In drug discovery, several scientific disciplines act together with manifold modern methods, technologies, and a wide range of automated instruments for the discovery and design of target-based drugs. The article discusses the novel BPM-based automation concept with an implemented example of a high-throughput screening of previously synthesized compound libraries. © 2014 Society for Laboratory Automation and Screening.

Three-dimensional visualization of material flow during friction stir welding by two pairs of X-ray transmission systems

International Nuclear Information System (INIS)

Morisada, Y.; Fujii, H.; Kawahito, Y.; Nakata, K.; Tanaka, M.

2011-01-01

Material flow during friction stir welding is crucial to obtaining sound joints. However, this phenomenon is still not fully understood despite many investigations and numerous models. In this study, the material flow is three-dimensionally visualized by X-ray radiography using a tiny spherical tungsten tracer. The movement of the tracer during the friction stir welding is observed by two pairs of X-ray transmission real-time imaging systems. The three-dimensional material flow is obtained by following the locus of the tracer.

Activación automática de las dimensiones de competencia y sociabilidad en el caso de los estereotipos de género

Directory of Open Access Journals (Sweden)

Juan Lupiáñez

2008-01-01

Full Text Available Se realizó un estudio experimental, en el que participaron 43 estudiantes de Psicología voluntarios, con el fin de medir la activación de las dimensiones estereotípicas de género, mediante un paradigma de priming como medida indirecta de la estereotipia de género, y bajo condiciones experimentales que limitaban los recursos cognitivos disponibles, maximizando el procesamiento automático. Se utilizaron como dimensiones estereotípicas respecto al género la sociabilidad o expresividad (propia de las mujeres y la competencia o instrumentalidad (propia de los hombres. Se utilizó una tarea de priming en la que los rasgos de competencia y sociabilidad, que los participantes debían categorizar como positivos o negativos, eran precedidos de fotografías de hombres y mujeres. Los resultados mostraron efectos de facilitación para la información estereotípica, apoyando así la hipótesis acerca de la activación automática de las dimensiones estereotípicas (competencia y sociabilidad y demostrando la relevancia de la evaluación de las personas en una determinada dimensión u otra en función de su grupo de género.

Analysis of dimensionality effect on shock wave boundary layer interaction in laminar hypersonic flows

International Nuclear Information System (INIS)

John, Bibin; Surendranath, Srikanth; Natarajan, Ganesh; Kulkarni, Vinayak

2016-01-01

Highlights: • Leading edge bluntness based separation control has been analysed numerically for 2D and axi-symmetric flows. • Differential growth of entropy layer in the streamwise direction in these cases leads to different interaction with respective boundary layers. • Separation control is found possible for planar flows beyond a critical radius called as equivalent radius. • No equivalent radius has been noticed in axi-symmertric flows in the present studies due to thin entropy layer and lack of favourable pressure gradient. - Abstract: Present investigations are centered on passive control of shock wave boundary layer interaction (SWBLI) for double cone and double wedge configurations with leading edge bluntness. This study seeks the differences in the flow physics of SWBLI in case of two dimensional (2D) and axisymmetric flow fields. In-house developed second order accurate finite-volume 2D axisymmetric compressible flow solver is employed for these studies. It is observed that the idea of leading edge bluntness offers reduction in separation bubble for 2D flow fields, whereas it leads to enhanced separation zone in case of axisymmetric flow fields. Relevant flow physics is well explored herein using wall pressure profile and relative thicknesses of boundary layer and entropy layer. Thicker entropy layer and stronger favorable pressure gradient are found responsible for the possibility of separation control in case of 2D flow fields. Thin entropy layer due to three dimensional relieving effect and its swallowing by the boundary layer are attributed for higher separation bubble size in case of cone with range of radii under consideration.

A three-dimensional image processing program for accurate, rapid, and semi-automated segmentation of neuronal somata with dense neurite outgrowth

Science.gov (United States)

Ross, James D.; Cullen, D. Kacy; Harris, James P.; LaPlaca, Michelle C.; DeWeerth, Stephen P.

2015-01-01

Three-dimensional (3-D) image analysis techniques provide a powerful means to rapidly and accurately assess complex morphological and functional interactions between neural cells. Current software-based identification methods of neural cells generally fall into two applications: (1) segmentation of cell nuclei in high-density constructs or (2) tracing of cell neurites in single cell investigations. We have developed novel methodologies to permit the systematic identification of populations of neuronal somata possessing rich morphological detail and dense neurite arborization throughout thick tissue or 3-D in vitro constructs. The image analysis incorporates several novel automated features for the discrimination of neurites and somata by initially classifying features in 2-D and merging these classifications into 3-D objects; the 3-D reconstructions automatically identify and adjust for over and under segmentation errors. Additionally, the platform provides for software-assisted error corrections to further minimize error. These features attain very accurate cell boundary identifications to handle a wide range of morphological complexities. We validated these tools using confocal z-stacks from thick 3-D neural constructs where neuronal somata had varying degrees of neurite arborization and complexity, achieving an accuracy of ≥95%. We demonstrated the robustness of these algorithms in a more complex arena through the automated segmentation of neural cells in ex vivo brain slices. These novel methods surpass previous techniques by improving the robustness and accuracy by: (1) the ability to process neurites and somata, (2) bidirectional segmentation correction, and (3) validation via software-assisted user input. This 3-D image analysis platform provides valuable tools for the unbiased analysis of neural tissue or tissue surrogates within a 3-D context, appropriate for the study of multi-dimensional cell-cell and cell-extracellular matrix interactions. PMID

Advanced numerical methods for three dimensional two-phase flow calculations in PWR

International Nuclear Information System (INIS)

Toumi, I.; Gallo, D.; Royer, E.

1997-01-01

This paper is devoted to new numerical methods developed for three dimensional two-phase flow calculations. These methods are finite volume numerical methods. They are based on an extension of Roe's approximate Riemann solver to define convective fluxes versus mean cell quantities. To go forward in time, a linearized conservative implicit integrating step is used, together with a Newton iterative method. We also present here some improvements performed to obtain a fully implicit solution method that provides fast running steady state calculations. This kind of numerical method, which is widely used for fluid dynamic calculations, is proved to be very efficient for the numerical solution to two-phase flow problems. This numerical method has been implemented for the three dimensional thermal-hydraulic code FLICA-4 which is mainly dedicated to core thermal-hydraulic transient and steady-state analysis. Hereafter, we will also find some results obtained for the EPR reactor running in a steady-state at 60% of nominal power with 3 pumps out of 4, and a thermal-hydraulic core analysis for a 1300 MW PWR at low flow steam-line-break conditions. (author)

Advanced One-Dimensional Entrained-Flow Gasifier Model Considering Melting Phenomenon of Ash

Directory of Open Access Journals (Sweden)

Jinsu Kim

2018-04-01

Full Text Available A one-dimensional model is developed to represent the ash-melting phenomenon, which was not considered in the previous one-dimensional (1-D entrained-flow gasifier model. We include sensible heat of slag and the fusion heat of ash in the heat balance equation. To consider the melting of ash, we propose an algorithm that calculates the energy balance for three scenarios based on temperature. We also use the composition and the thermal properties of anorthite mineral to express ash. gPROMS for differential equations is used to solve this algorithm in a simulation; the results include coal conversion, gas composition, and temperature profile. Based on the Texaco pilot plant gasifier, we validate our model. Our results show good agreement with previous experimental data. We conclude that the sensible heat of slag and the fusion heat of ash must be included in the entrained flow gasifier model.

Influence of flow conditions and matrix coatings on growth and differentiation of three-dimensionally cultured rat hepatocytes.

Science.gov (United States)

Fiegel, Henning C; Havers, Joerg; Kneser, Ulrich; Smith, Molly K; Moeller, Tim; Kluth, Dietrich; Mooney, David J; Rogiers, Xavier; Kaufmann, Peter M

2004-01-01

Maintenance of liver-specific function of hepatocytes in culture is still difficult. Improved culture conditions may enhance the cell growth and function of cultured cells. We investigated the effect of three-dimensional culture under flow conditions, and the influence of surface modifications in hepatocyte cultures. Hepatocytes were harvested from Lewis rats. Cells were cultured on three-dimensional polymeric poly-lactic-co-glycolic acid (PLGA) matrices in static culture, or in a pulsatile flow-bioreactor system. Different surface modifications of matrices were investigated: coating with collagen I, collagen IV, laminin, or fibronectin; or uncoated matrix. Hepatocyte numbers, DNA content, and albumin secretion rate were assessed over the observation period. Culture under flow condition significantly enhanced cell numbers. An additional improvement of this effect was observed, when matrix coating was used. Cellular function also showed a significant increase (4- to 5-fold) under flow conditions when compared with static culture. Our data showed that culture under flow conditions improves cell number, and strongly enhances cellular function. Matrix modification by coating with extracellular matrix showed overall an additive stimulatory effect. Our conclusion is that combining three-dimensional culture under flow conditions and using matrix modification significantly improves culture conditions and is therefore attractive for the development of successful culture systems for hepatocytes.

Preliminary three-dimensional potential flow simulation of a five-liter flask air injection experiment

International Nuclear Information System (INIS)

Davis, J.E.

1977-01-01

The preliminary results of an unsteady three-dimensional potential flow analysis of a five-liter flask air injection experiment (small-scale model simulation of a nuclear reactor steam condensation system) are presented. The location and velocity of the free water surface in the flask as a function of time are determined during pipe venting and bubble expansion processes. The analyses were performed using an extended version of the NASA-Ames Three-Dimensional Potential Flow Analysis System (POTFAN), which uses the vortex lattice singularity method of potential flow analysis. The pressure boundary condition at the free water surface and the boundary condition along the free jet boundary near the pipe exit were ignored for the purposes of the present study. The results of the analysis indicate that large time steps can be taken without significantly reducing the accuracy of the solutions and that the assumption of inviscid flow should not have an appreciable effect on the geometry and velocity of the free water surface. In addition, the computation time required for the solutions was well within acceptable limits

Three-Dimensional Flow Generated by a Partially Penetrating Well in a Two-Aquifer System

Science.gov (United States)

Sepulveda, N.

2007-12-01

An analytical solution is presented for three-dimensional (3D) flow in a confined aquifer and the overlying storative semiconfining layer and unconfined aquifer. The equation describing flow caused by a partially penetrating production well is solved analytically to provide a method to accurately determine the hydraulic parameters in the confined aquifer, semiconfining layer, and unconfined aquifer from aquifer-test data. Previous solutions for a partially penetrating well did not account for 3D flow or storativity in the semiconfining unit. The 3D and two- dimensional (2D) flow solutions in the semiconfining layer are compared for various hydraulic conductivity ratios between the aquifer and the semiconfining layer. Analysis of the drawdown data from an aquifer test in central Florida showed that the 3D solution in the semiconfining layer provides a more unique identification of the hydraulic parameters than the 2D solution. The analytical solution could be used to analyze, with higher accuracy, the effect that pumping water from the lower aquifer in a two-aquifer system has on wetlands.

A realization of an automated data flow for data collecting, processing, storing and retrieving

International Nuclear Information System (INIS)

Friedsam, H.; Pushor, R.; Ruland, R.

1986-11-01

GEONET is a database system developed at the Stanford Linear Accelerator Center for the alignment of the Stanford Linear Collider. It features an automated data flow, ranging from data collection using HP110 handheld computers to processing, storing and retrieving data and finally to adjusted coordinates. This paper gives a brief introduction to the SLC project and the applied survey methods. It emphasizes the hardware and software implementation of GEONET using a network of IBM PC/XT's. 14 refs., 4 figs

Mixing of high density solution in vertical upward flow

International Nuclear Information System (INIS)

Kumamaru, Hiroshige; Hosogi, Nobuyoshi; Komada, Toshiaki; Fujiwara, Yoshiki

1999-01-01

Experimental and analytical studies have been performed in order to provide fundamental data and a numerical calculation model on the mixing of boric acid solution, injected from the standby liquid control system (SLCS), under a low natural circulation flow during an ATWS in a BWR. First, fundamental experiments on the mixing of high-density solution in vertically-upward water flow have been performed by using a small apparatus. Mixing patterns observed in the experiments have been classified to two groups, i.e. complete mixing (entrainment) and incomplete mixing (entrainment). In the complete mixing, the injected high-density solution is mixed (entrained) completely into the vertically-upward water flow. From the experiments, the minimum water flow rates in which the complete mixing (entrainment) is achieved have been obtained for various solution densities and solution injection rates. Secondly, two-dimensional numerical calculations have been performed. A continuity equation for total fluid, momentum equations in two directions and a continuity equation for solute are solved by using the finite difference method for discretization method and by following the MAC method for solution procedure. The calculations have predicted nearly the minimum water flow rate in which the complete mixing is achieved, while the calculations have been performed only for one combination of the solution density and solution injection rate until now. (author)

Three-dimensional simulation of flow and combustion for pulverised coal injection

Energy Technology Data Exchange (ETDEWEB)

Guo, B.Y.; Zulli, P.; Rogers, H.; Mathieson, J.G.; Yu, A.B. [BlueScope Steel Research, Port Kembla, NSW (Australia)

2005-07-01

A three-dimensional numerical model of pulverised coal injection has been developed for simulating coal flow and combustion in the tuyere and raceway of a blast furnace. The model has been used to simulate previously reported combustion tests, which feature an inclined co-axial lance with an annular cooling gas. The predicted coal burnout agrees well with that measured for three coals with volatile contents and particle size ranging between 20.2-36.4% and particle sizes 1-200 {mu}m. Many important phenomena including flow asymmetry, recirculating flow and particle dispersion in the combustion chamber have been predicted. The current model can reproduce the experimental observations including the effects on burnout of coal flowrate and the introduction of methane for lance cooling.

Comparative study of the two-fluid momentum equations for multi-dimensional bubbly flows: Modification of Reynolds stress

Energy Technology Data Exchange (ETDEWEB)

Lee, Seung Jun; Park, Ik Kyu; Yoon, Han Young [Thermal-Hydraulic Safety Research Division, Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of); Jae, Byoung [School of Mechanical Engineering, Chungnam National University, Daejeon (Korea, Republic of)

2017-01-15

Two-fluid equations are widely used to obtain averaged behaviors of two-phase flows. This study addresses a problem that may arise when the two-fluid equations are used for multi-dimensional bubbly flows. If steady drag is the only accounted force for the interfacial momentum transfer, the disperse-phase velocity would be the same as the continuous-phase velocity when the flow is fully developed without gravity. However, existing momentum equations may show unphysical results in estimating the relative velocity of the disperse phase against the continuous-phase. First, we examine two types of existing momentum equations. One is the standard two-fluid momentum equation in which the disperse-phase is treated as a continuum. The other is the averaged momentum equation derived from a solid/ fluid particle motion. We show that the existing equations are not proper for multi-dimensional bubbly flows. To resolve the problem mentioned above, we modify the form of the Reynolds stress terms in the averaged momentum equation based on the solid/fluid particle motion. The proposed equation shows physically correct results for both multi-dimensional laminar and turbulent flows.

Stabilisation of a three-dimensional boundary layer by base-flow manipulation using plasma actuators

International Nuclear Information System (INIS)

Dörr, P C; Kloker, M J

2015-01-01

The applicability of dielectric barrier discharge plasma actuators for controlling the crossflow-vortex-induced laminar breakdown in a three-dimensional swept-wing-type boundary-layer flow is investigated using direct numerical simulation. Similar to the classical application of suction at the wall the aim is to modify the quasi two-dimensional base flow and to weaken primary crossflow (CF) instability, mainly due to a reduction of the basic CF. Not only localised volumetric forcing by plasma actuators but also CF counter-blowing and spots with a moving wall are investigated to identify effective fundamental mechanisms. It is found that counter blowing always results in partial blockage of the flow and eventually increased CF velocity, whereas moving-wall spots can slightly reduce the CF and the amplitude of crossflow vortices. Using discrete volumetric forcing a significant attenuation even of finite-amplitude crossflow vortices and thus a distinct transition delay is achieved. (paper)

Microwave-Assisted Sample Treatment in a Fully Automated Flow-Based Instrument: Oxidation of Reduced Technetium Species in the Analysis of Total Technetium-99 in Caustic Aged Nuclear Waste Samples

International Nuclear Information System (INIS)

Egorov, Oleg B.; O'Hara, Matthew J.; Grate, Jay W.

2004-01-01

An automated flow-based instrument for microwave-assisted treatment of liquid samples has been developed and characterized. The instrument utilizes a flow-through reaction vessel design that facilitates the addition of multiple reagents during sample treatment, removal of the gaseous reaction products, and enables quantitative removal of liquids from the reaction vessel for carryover-free operations. Matrix modification and speciation control chemistries that are required for the radiochemical determination of total 99Tc in caustic aged nuclear waste samples have been investigated. A rapid and quantitative oxidation procedure using peroxydisulfate in acidic solution was developed to convert reduced technetium species to pertechnetate in samples with high content of reducing organics. The effectiveness of the automated sample treatment procedures has been validated in the radiochemical analysis of total 99Tc in caustic aged nuclear waste matrixes from the Hanford site

Stochastic and collisional diffusion in two-dimensional periodic flows

International Nuclear Information System (INIS)

Doxas, I.; Horton, W.; Berk, H.L.

1990-05-01

The global effective diffusion coefficient D* for a two-dimensional system of convective rolls with a time dependent perturbation added, is calculated. The perturbation produces a background diffusion coefficient D, which is calculated analytically using the Menlikov-Arnold integral. This intrinsic diffusion coefficient is then enhanced by the unperturbed flow, to produce the global effective diffusion coefficient D*, which we can calculate theoretically for a certain range of parameters. The theoretical value agrees well with numerical simulations. 23 refs., 4 figs

THREE DIMENSIONAL CFD MODELLING OF FLOW STRUCTURE IN COMPOUND CHANNELS

Directory of Open Access Journals (Sweden)

Usman Ghani

2010-10-01

Full Text Available The computational modeling of three dimensional flows in a meandering compound channel has been performed in this research work. The flow calculations are performed by solving 3D steady state continuity and Reynolds averaged Navier-Stokes equations. The turbulence closure is approximated with standard - turbulence model. The model equations are solved numerically with a general purpose software package. A comprehensive validation of the simulated results against the experimental data and a demonstration that the software used in this study has matured enough for investigating practical engineering problems are the major contributions of this paper. The model was initially validated. This was achieved by computing streamwise point velocities at different depths of various sections and depth averaged velocities at three cross sections along the main channel and comparing these results with experimental data. After the validation of the model, predictions were made for different flow parameters including velocity contours at the surface, pressure distribution, turbulence intensity etc. The results gave an overall understanding of these flow variables in meandering channels. The simulation also established the good prediction capability of the standard - turbulence model for flows in compound channels.

Two dimensional numerical analysis of aerodynamic characteristics for rotating cylinder on concentrated air flow

Science.gov (United States)

Alias, M. S.; Rafie, A. S. Mohd; Marzuki, O. F.; Hamid, M. F. Abdul; Chia, C. C.

2017-12-01

Over the years, many studies have demonstrated the feasibility of the Magnus effect on spinning cylinder to improve lift production, which can be much higher than the traditional airfoil shape. With this characteristic, spinning cylinder might be used as a lifting device for short take-off distance aircraft or unmanned aerial vehicle (UAV). Nonetheless, there is still a gap in research to explain the use of spinning cylinder as a good lifting device. Computational method is used for this study to analyse the Magnus effect, in which two-dimensional finite element numerical analysis method is applied using ANSYS FLUENT software to examine the coefficients of lift and drag, and to investigate the flow field around the rotating cylinder surface body. Cylinder size of 30mm is chosen and several configurations in steady and concentrated air flows have been evaluated. All in all, it can be concluded that, with the right configuration of the concentrated air flow setup, the rotating cylinder can be used as a lifting device for very short take-off since it can produce very high coefficient of lift (2.5 times higher) compared with steady air flow configuration.

Kolmogorov flow in two dimensional strongly coupled dusty plasma

Energy Technology Data Exchange (ETDEWEB)

Gupta, Akanksha; Ganesh, R., E-mail: ganesh@ipr.res.in; Joy, Ashwin [Institute for Plasma Research, Bhat Gandhinagar, Gujarat 382 428 (India)

2014-07-15

Undriven, incompressible Kolmogorov flow in two dimensional doubly periodic strongly coupled dusty plasma is modelled using generalised hydrodynamics, both in linear and nonlinear regime. A complete stability diagram is obtained for low Reynolds numbers R and for a range of viscoelastic relaxation time τ{sub m} [0 < τ{sub m} < 10]. For the system size considered, using a linear stability analysis, similar to Navier Stokes fluid (τ{sub m} = 0), it is found that for Reynolds number beyond a critical R, say R{sub c}, the Kolmogorov flow becomes unstable. Importantly, it is found that R{sub c} is strongly reduced for increasing values of τ{sub m}. A critical τ{sub m}{sup c} is found above which Kolmogorov flow is unconditionally unstable and becomes independent of Reynolds number. For R < R{sub c}, the neutral stability regime found in Navier Stokes fluid (τ{sub m} = 0) is now found to be a damped regime in viscoelastic fluids, thus changing the fundamental nature of transition of Kolmogorov flow as function of Reynolds number R. A new parallelized nonlinear pseudo spectral code has been developed and is benchmarked against eigen values for Kolmogorov flow obtained from linear analysis. Nonlinear states obtained from the pseudo spectral code exhibit cyclicity and pattern formation in vorticity and viscoelastic oscillations in energy.

Spatio-temporal organization of dynamics in a two-dimensional periodically driven vortex flow: A Lagrangian flow network perspective.

Science.gov (United States)

Lindner, Michael; Donner, Reik V

2017-03-01

We study the Lagrangian dynamics of passive tracers in a simple model of a driven two-dimensional vortex resembling real-world geophysical flow patterns. Using a discrete approximation of the system's transfer operator, we construct a directed network that describes the exchange of mass between distinct regions of the flow domain. By studying different measures characterizing flow network connectivity at different time-scales, we are able to identify the location of dynamically invariant structures and regions of maximum dispersion. Specifically, our approach allows us to delimit co-existing flow regimes with different dynamics. To validate our findings, we compare several network characteristics to the well-established finite-time Lyapunov exponents and apply a receiver operating characteristic analysis to identify network measures that are particularly useful for unveiling the skeleton of Lagrangian chaos.

Three-dimensional fluid flow phenomena in the blade end wall corner region

Science.gov (United States)

Hazarika, B. K.; Raj, R.; Boldman, D. R.

1986-01-01

Flow visualization, static and total pressure measurements, and mean velocity profile measurements with a single-sensor inclined hot wire probe, are used in a study of three-dimensional flow at a turbine blade end wall corner region for six critical axial stations along the blade chord. Three vortices are identified: (1) a horseshoe vortex near the leading edge; (2) a corner eddy between the horseshoe vortex and the corner; and (3) a vortex at the rear portion of the corner due to the corner eddy's secondary flow. Attention is given to the relative size and rate-of-spread of the vortices in the streamwise direction.

Integrated safeguards and security for a highly automated process

International Nuclear Information System (INIS)

Zack, N.R.; Hunteman, W.J.; Jaeger, C.D.

1993-01-01

Before the cancellation of the New Production Reactor Programs for the production of tritium, the reactors and associated processing were being designed to contain some of the most highly automated and remote systems conceived for a Department of Energy facility. Integrating safety, security, materials control and accountability (MC and A), and process systems at the proposed facilities would enhance the overall information and protection-in-depth available. Remote, automated fuel handling and assembly/disassembly techniques would deny access to the nuclear materials while upholding ALARA principles but would also require the full integration of all data/information systems. Such systems would greatly enhance MC and A as well as facilitate materials tracking. Physical protection systems would be connected with materials control features to cross check activities and help detect and resolve anomalies. This paper will discuss the results of a study of the safeguards and security benefits achieved from a highly automated and integrated remote nuclear facility and the impacts that such systems have on safeguards and computer and information security

VNAP2: a computer program for computation of two-dimensional, time-dependent, compressible, turbulent flow

Energy Technology Data Exchange (ETDEWEB)

Cline, M.C.

1981-08-01

VNAP2 is a computer program for calculating turbulent (as well as laminar and inviscid), steady, and unsteady flow. VNAP2 solves the two-dimensional, time-dependent, compressible Navier-Stokes equations. The turbulence is modeled with either an algebraic mixing-length model, a one-equation model, or the Jones-Launder two-equation model. The geometry may be a single- or a dual-flowing stream. The interior grid points are computed using the unsplit MacCormack scheme. Two options to speed up the calculations for high Reynolds number flows are included. The boundary grid points are computed using a reference-plane-characteristic scheme with the viscous terms treated as source functions. An explicit artificial viscosity is included for shock computations. The fluid is assumed to be a perfect gas. The flow boundaries may be arbitrary curved solid walls, inflow/outflow boundaries, or free-jet envelopes. Typical problems that can be solved concern nozzles, inlets, jet-powered afterbodies, airfoils, and free-jet expansions. The accuracy and efficiency of the program are shown by calculations of several inviscid and turbulent flows. The program and its use are described completely, and six sample cases and a code listing are included.

Automated four-dimensional Monte Carlo workflow using log files and real-time motion monitoring

International Nuclear Information System (INIS)

Sibolt, P; Andersen, C E; Cronholm, R O; Heath, E; Behrens, C F

2017-01-01

With emerging techniques for tracking and gating methods in radiotherapy of lung cancer patients, there is an increasing need for efficient four-dimensional Monte Carlo (4DMC) based quality assurance (QA). An automated and flexible workflow for 4DMC QA, based on the 4DdefDOSXYZnrc user code, has been developed in python. The workflow has been tested and verified using an in-house developed dosimetry system comprised of a dynamic thorax phantom constructed for plastic scintillator dosimetry. The workflow is directly compatible with any treatment planning system and can also be triggered by the appearance of linac log files. It has minimum user interaction and, with the use of linac log files, it provides a method for verification of the actually delivered dose in the patient geometry. (paper)

Highly conducting one-dimensional solids

CERN Document Server

Evrard, Roger; Doren, Victor

1979-01-01

Although the problem of a metal in one dimension has long been known to solid-state physicists, it was not until the synthesis of real one-dimensional or quasi-one-dimensional systems that this subject began to attract considerable attention. This has been due in part to the search for high­ temperature superconductivity and the possibility of reaching this goal with quasi-one-dimensional substances. A period of intense activity began in 1973 with the report of a measurement of an apparently divergent conduc­ tivity peak in TfF-TCNQ. Since then a great deal has been learned about quasi-one-dimensional conductors. The emphasis now has shifted from trying to find materials of very high conductivity to the many interesting problems of physics and chemistry involved. But many questions remain open and are still under active investigation. This book gives a review of the experimental as well as theoretical progress made in this field over the last years. All the chapters have been written by scientists who have ...

Development and assessment of Multi-dimensional flow models in the thermal-hydraulic system analysis code MARS

Energy Technology Data Exchange (ETDEWEB)

Chung, B. D.; Bae, S. W.; Jeong, J. J.; Lee, S. M

2005-04-15

A new multi-dimensional component has been developed to allow for more flexible 3D capabilities in the system code, MARS. This component can be applied in the Cartesian and cylindrical coordinates. For the development of this model, the 3D convection and diffusion terms are implemented in the momentum and energy equation. And a simple Prandtl's mixing length model is applied for the turbulent viscosity. The developed multi-dimensional component was assessed against five conceptual problems with analytic solution. And some SETs are calculated and compared with experimental data. With this newly developed multi-dimensional flow module, the MARS code can realistic calculate the flow fields in pools such as those occurring in the core, steam generators and IRWST.

Development and assessment of Multi-dimensional flow models in the thermal-hydraulic system analysis code MARS

International Nuclear Information System (INIS)

Chung, B. D.; Bae, S. W.; Jeong, J. J.; Lee, S. M.

2005-04-01

A new multi-dimensional component has been developed to allow for more flexible 3D capabilities in the system code, MARS. This component can be applied in the Cartesian and cylindrical coordinates. For the development of this model, the 3D convection and diffusion terms are implemented in the momentum and energy equation. And a simple Prandtl's mixing length model is applied for the turbulent viscosity. The developed multi-dimensional component was assessed against five conceptual problems with analytic solution. And some SETs are calculated and compared with experimental data. With this newly developed multi-dimensional flow module, the MARS code can realistic calculate the flow fields in pools such as those occurring in the core, steam generators and IRWST

Cross-flow shearing effects on the trajectory of highly buoyant bent-over plumes

Science.gov (United States)

Tohidi, Ali; Kaye, Nigel Berkeley; Gollner, Michael J.

2017-11-01

The dynamics of highly buoyant plumes in cross-flow is ubiquitous throughout both industrial and environmental phenomena. The rise of smoke from a chimney, wastewater discharge into river currents, and dispersion of wildfire plumes are only a few instances. There have been many previous studies investigating the behavior of jets and highly buoyant plumes in cross-flow. So far, however, very little attention has been paid to the role of shearing effects in the boundary layer on the plume trajectory, particularly on the rise height. Numerical simulations and dimensional analysis are conducted to characterize the near- and far-field behavior of a highly buoyant plume in a boundary layer cross-flow. The results show that shear in the cross-flow leads to large differences in the rise height of the plume in relation to a uniform cross-flow, especially at far-field. This material is based upon work supported by the National Science Foundation under Grant No.1200560. Any opinions, findings, and conclusions or recommendations expressed in the material are of the authors and do not necessarily reflect the views of NSF.

Three dimensional peristaltic flow of hyperbolic tangent fluid in non-uniform channel having flexible walls

Directory of Open Access Journals (Sweden)

M. Ali Abbas

2016-03-01

Full Text Available In this present analysis, three dimensional peristaltic flow of hyperbolic tangent fluid in a non-uniform channel has been investigated. We have considered that the pressure is uniform over the whole cross section and the interial effects have been neglected. For this purpose we consider laminar flow under the assumptions of long wavelength (λ→∞ and creeping flow (Re→0 approximations. The attained highly nonlinear equations are solved with the help of Homotopy perturbation method. The influence of various physical parameters of interest is demonstrated graphically for wall tension, mass characterization, damping nature of the wall, wall rigidity, wall elastance, aspect ratio and the Weissenberg number. In this present investigation we found that the magnitude of the velocity is maximum in the center of the channel whereas it is minimum near the walls. Stream lines are also drawn to discuss the trapping mechanism for all the physical parameters. Comparison has also been presented between Newtonian and non-Newtonian fluid.

A numerical study of three-dimensional flame propagation over thin solids in purely forced concurrent flow including gas-phase radiation

Science.gov (United States)

Feier, Ioan I., Jr.

The effect of flame radiation on concurrent-flow flame spread over a thin solid sample of finite width in a low-speed wind tunnel is modeled using three-dimensional full Navier-Stokes equations and three-dimensional flame radiation transfer equations. The formulation includes the conservation of mass, momentum, energy, and species: fuel vapor, oxygen, carbon dioxide and water vapor. The SN discrete ordinates method is used to solve the radiation transfer equation with a mean absorption coefficient kappa = Ckappa p, where kappap is the Planck mean absorption coefficient of the gas mixture. The varying parameter C has a value between 0 and 1; C represents the strength of flame radiation. In addition, the solid fuel absorptivity alpha is varied to ascertain the effect of flame radiation heat feedback to the solid. The flow tunnel modeled has a dimension of 10x10x30 cm, the solid fuel has a width of 6-cm with two 1-cm inert strips as edges. Incoming forced flow velocity (5 cm/s) of 21% oxygen is assumed. For comparison with the three-dimensional results, corresponding two-dimensional computations are also performed. Detailed spatial flame profiles, solid surface profiles, and heat fluxes are presented. Increasing the flame radiation strength decreases the flame length. Although flame radiation provides an additional heat transfer mechanism to preheat the solid, it is insufficient to offset the decreased convective heating due to the shorter flame; the net effect is a slower spread rate. The percentage of unreacted fuel vapor that escapes from the flame is under 2%. It is theorized that some of the pyrolyzed fuel vapor diffuses sideway and reacts at the flame edges. A radiative energy balance is analyzed also. Flame radiative feedback to the solid plays a more important role in two-dimensional flames. With high solid fuel absorptivity, a peak in the flame spread rate occurs at an intermediate value of flame radiation strength---due to the competition between two

Modeling one-dimensional unsaturated flow at the Rocky Flats Environmental Technology Site near Golden, Colorado

International Nuclear Information System (INIS)

Thompson, J.S.; Zeiler, R.M.

1995-01-01

A field investigation characterizing contamination at the Rocky Flats Plant (Rocky Flats Environmental Technology Site) near Golden, Colorado revealed unexpectedly high moisture contents in the unsaturated soil column (vadose zone) beneath several of the Plant's Waste Water Treatment Plant (WWTP) sludge drying beds. Because these beds were seldom in use, researchers had hypothesized that the water required to maintain the saturated conditions observed beneath several of the sludge drying beds was coming from sources other than the beds themselves. In an effort to substantiate this hypothesis, a one-dimensional physically-based unsaturated flow model was utilized to simulate the vertical movement of moisture from the sludge drying beds into the unsaturated soil column below. The model was run to simulate vertical flow over a two-year period and results indicated that no significant changes from initial conditions were apparent. This evidence supports the hypothesis that the high moisture contents found beneath the sludge drying beds are being fed by sources other than infiltration of sludge applied to the beds themselves. This paper presents the details of the simulation and provides further evidence of the hypothesized flow regime

Two dimensional MHD flows between porous boundaries

International Nuclear Information System (INIS)

Gratton, F.T.

1994-01-01

Similarity solutions of dissipative MHD equations representing conducting fluids injected through porous walls and flowing out in both directions from the center of the channel, are studied as a function of four non dimensional parameters, Reynolds number R e , magnetic Reynolds number R m , Alfvenic Mach number, M A , and pressure gradient coefficient, C. The effluence is restrained by an external magnetic field normal to the walls. When R m m >>1, the solution may model a collision of plasmas of astrophysical interest. In this case the magnetic field lines help to drive the outflow acting jointly with the pressure gradient. The law for C as a function of the other parameters is given for several asymptotic limits. (author). 3 refs, 6 figs

Two-dimensional steady unsaturated flow through embedded elliptical layers

Science.gov (United States)

Bakker, Mark; Nieber, John L.

2004-12-01

New analytic element solutions are presented for unsaturated, two-dimensional steady flow in vertical planes that include nonoverlapping impermeable elliptical layers and elliptical inhomogeneities. The hydraulic conductivity, which is represented by an exponential function of the pressure head, differs between the inside and outside of an elliptical inhomogeneity; both the saturated hydraulic conductivity and water retention parameters are allowed to differ between the inside and outside. The Richards equation is transformed, through the Kirchhoff transformation and a second standard transformation, into the modified Helmholtz equation. Analytic element solutions are obtained through separation of variables in elliptical coordinates. The resulting equations for the Kirchhoff potential consist of infinite sums of products of exponentials and modified Mathieu functions. In practical applications the series are truncated but still fulfill the differential equation exactly; boundary conditions are met approximately but up to machine accuracy, provided that enough terms are used. The pressure head, saturation, and flow may be computed analytically at any point in the vadose zone. Examples are given of the shadowing effect of an impermeable elliptical layer in a uniform flow field and funnel-type flow between two elliptical inhomogeneities. The presented solutions may be applied to study transport processes in vadose zones containing many impermeable elliptical layers or elliptical inhomogeneities.

Three-dimensional rotation electron diffraction: software RED for automated data collection and data processing.

Science.gov (United States)

Wan, Wei; Sun, Junliang; Su, Jie; Hovmöller, Sven; Zou, Xiaodong

2013-12-01

Implementation of a computer program package for automated collection and processing of rotation electron diffraction (RED) data is described. The software package contains two computer programs: RED data collection and RED data processing. The RED data collection program controls the transmission electron microscope and the camera. Electron beam tilts at a fine step (0.05-0.20°) are combined with goniometer tilts at a coarse step (2.0-3.0°) around a common tilt axis, which allows a fine relative tilt to be achieved between the electron beam and the crystal in a large tilt range. An electron diffraction (ED) frame is collected at each combination of beam tilt and goniometer tilt. The RED data processing program processes three-dimensional ED data generated by the RED data collection program or by other approaches. It includes shift correction of the ED frames, peak hunting for diffraction spots in individual ED frames and identification of these diffraction spots as reflections in three dimensions. Unit-cell parameters are determined from the positions of reflections in three-dimensional reciprocal space. All reflections are indexed, and finally a list with hkl indices and intensities is output. The data processing program also includes a visualizer to view and analyse three-dimensional reciprocal lattices reconstructed from the ED frames. Details of the implementation are described. Data collection and data processing with the software RED are demonstrated using a calcined zeolite sample, silicalite-1. The structure of the calcined silicalite-1, with 72 unique atoms, could be solved from the RED data by routine direct methods.

Automated measurement and classification of pulmonary blood-flow velocity patterns using phase-contrast MRI and correlation analysis.

Science.gov (United States)

van Amerom, Joshua F P; Kellenberger, Christian J; Yoo, Shi-Joon; Macgowan, Christopher K

2009-01-01

An automated method was evaluated to detect blood flow in small pulmonary arteries and classify each as artery or vein, based on a temporal correlation analysis of their blood-flow velocity patterns. The method was evaluated using velocity-sensitive phase-contrast magnetic resonance data collected in vitro with a pulsatile flow phantom and in vivo in 11 human volunteers. The accuracy of the method was validated in vitro, which showed relative velocity errors of 12% at low spatial resolution (four voxels per diameter), but was reduced to 5% at increased spatial resolution (16 voxels per diameter). The performance of the method was evaluated in vivo according to its reproducibility and agreement with manual velocity measurements by an experienced radiologist. In all volunteers, the correlation analysis was able to detect and segment peripheral pulmonary vessels and distinguish arterial from venous velocity patterns. The intrasubject variability of repeated measurements was approximately 10% of peak velocity, or 2.8 cm/s root-mean-variance, demonstrating the high reproducibility of the method. Excellent agreement was obtained between the correlation analysis and radiologist measurements of pulmonary velocities, with a correlation of R2=0.98 (P<.001) and a slope of 0.99+/-0.01.

ISS Payload Racks Automated Flow Control Calibration Method

Science.gov (United States)

Simmonds, Boris G.

2003-01-01

Payload Racks utilize MTL and/or LTL station water for cooling of payloads and avionics. Flow control range from valves of fully closed, to up to 300 Ibmhr. Instrument accuracies are as high as f 7.5 Ibm/hr for flow sensors and f 3 Ibm/hr for valve controller, for a total system accuracy of f 10.5 Ibm/hr. Improved methodology was developed, tested and proven that reduces accuracy of the commanded flows to less than f 1 Ibmhr. Uethodology could be packed in a "calibration kit" for on- orbit flow sensor checkout and recalibration, extending the rack operations before return to earth. -

Dynamic behaviour of high-pressure natural-gas flow in pipelines

International Nuclear Information System (INIS)

Gato, L.M.C.; Henriques, J.C.C.

2005-01-01

The aim of the present study is the numerical modelling of the dynamic behaviour of high-pressure natural-gas flow in pipelines. The numerical simulation was performed by solving the conservation equations, for one-dimensional compressible flow, using the Runge-Kutta discontinuous Galerkin method, with third-order approximation in space and time. The boundary conditions were imposed using a new weak formulation based on the characteristic variables. The occurrence of pressure oscillations in natural-gas pipelines was studied as a result of the compression wave originated by the rapid closure of downstream shut-off valves. The effect of the partial reflection of pressure waves was also analyzed in the transition between pipes of different cross-sectional areas

Dynamic behaviour of high-pressure natural-gas flow in pipelines

Energy Technology Data Exchange (ETDEWEB)

Gato, L.M.C. [Department of Mechanical Engineering, Instituto Superior Tecnico, Technical University of Lisbon, Av. Rovisco Pais, 1049-001 Lisbon (Portugal)]. E-mail: lgato@mail.ist.utl.pt; Henriques, J.C.C. [Department of Mechanical Engineering, Instituto Superior Tecnico, Technical University of Lisbon, Av. Rovisco Pais, 1049-001 Lisbon (Portugal)]. E-mail: jcch@mail.ist.utl.pt

2005-10-01

The aim of the present study is the numerical modelling of the dynamic behaviour of high-pressure natural-gas flow in pipelines. The numerical simulation was performed by solving the conservation equations, for one-dimensional compressible flow, using the Runge-Kutta discontinuous Galerkin method, with third-order approximation in space and time. The boundary conditions were imposed using a new weak formulation based on the characteristic variables. The occurrence of pressure oscillations in natural-gas pipelines was studied as a result of the compression wave originated by the rapid closure of downstream shut-off valves. The effect of the partial reflection of pressure waves was also analyzed in the transition between pipes of different cross-sectional areas.

MIDAS: Automated Approach to Design Microwave Integrated Inductors and Transformers on Silicon

Directory of Open Access Journals (Sweden)

L. Aluigi

2013-09-01

Full Text Available The design of modern radiofrequency integrated circuits on silicon operating at microwave and millimeter-waves requires the integration of several spiral inductors and transformers that are not commonly available in the process design-kits of the technologies. In this work we present an auxiliary CAD tool for Microwave Inductor (and transformer Design Automation on Silicon (MIDAS that exploits commercial simulators and allows the implementation of an automatic design flow, including three-dimensional layout editing and electromagnetic simulations. In detail, MIDAS allows the designer to derive a preliminary sizing of the inductor (transformer on the bases of the design entries (specifications. It draws the inductor (transformer layers for the specific process design kit, including vias and underpasses, with or without patterned ground shield, and launches the electromagnetic simulations, achieving effective design automation with respect to the traditional design flow for RFICs. With the present software suite the complete design time is reduced significantly (typically 1 hour on a PC based on Intel® Pentium® Dual 1.80GHz CPU with 2-GB RAM. Afterwards both the device equivalent circuit and the layout are ready to be imported in the Cadence environment.

High Order Large Eddy Simulation (LES) of Gliding Snake Aerodynamics: Effect of 3D Flow on Gliding Performance

Science.gov (United States)

Delorme, Yann; Hassan, Syed Harris; Socha, Jake; Vlachos, Pavlos; Frankel, Steven

2014-11-01

Chrysopelea paradisi are snakes that are able to glide over long distances by morphing the cross section of their bodies from circular to a triangular airfoil, and undulating through the air. Snake glide is characterized by relatively low Reynolds number and high angle of attack as well as three dimensional and unsteady flow. Here we study the 3D dynamics of the flow using an in-house high-order large eddy simulation code. The code features a novel multi block immersed boundary method to accurately and efficiently represent the complex snake geometry. We investigate the steady state 3-dimensionality of the flow, especially the wake flow induced by the presence of the snake's body, as well as the vortex-body interaction thought to be responsible for part of the lift enhancement. Numerical predictions of global lift and drag will be compared to experimental measurements, as well as the lift distribution along the body of the snake due to cross sectional variations. Comparisons with previously published 2D results are made to highlight the importance of 3-dimensional effects. Additional efforts are made to quantify properties of the vortex shedding and Dynamic Mode Decomposition (DMD) is used to analyse the main modes responsible for the lift and drag forces.

Three-Dimensional Smoothed Particle Hydrodynamics Modeling of Preferential Flow Dynamics at Fracture Intersections on a High-Performance Computing Platform

Science.gov (United States)

Kordilla, J.; Bresinsky, L. T.

2017-12-01

The physical mechanisms that govern preferential flow dynamics in unsaturated fractured rock formations are complex and not well understood. Fracture intersections may act as an integrator of unsaturated flow, leading to temporal delay, intermittent flow and partitioning dynamics. In this work, a three-dimensional Pairwise-Force Smoothed Particle Hydrodynamics (PF-SPH) model is being applied in order to simulate gravity-driven multiphase flow at synthetic fracture intersections. SPH, as a meshless Lagrangian method, is particularly suitable for modeling deformable interfaces, such as three-phase contact dynamics of droplets, rivulets and free-surface films. The static and dynamic contact angle can be recognized as the most important parameter of gravity-driven free-surface flow. In SPH, surface tension and adhesion naturally emerges from the implemented pairwise fluid-fluid (sff) and solid-fluid (ssf) interaction force. The model was calibrated to a contact angle of 65°, which corresponds to the wetting properties of water on Poly(methyl methacrylate). The accuracy of the SPH simulations were validated against an analytical solution of Poiseuille flow between two parallel plates and against laboratory experiments. Using the SPH model, the complex flow mode transitions from droplet to rivulet flow of an experimental study were reproduced. Additionally, laboratory dimensionless scaling experiments of water droplets were successfully replicated in SPH. Finally, SPH simulations were used to investigate the partitioning dynamics of single droplets into synthetic horizontal fractures with various apertures (Δdf = 0, 0.5, 1.0, 1.5, 2.0, 2.5, 3.0, 3.5, 4.0 mm) and offsets (Δdoff = -1.5, -1.0, -0.5, 0, 1.0, 2.0, 3.0 mm). Fluid masses were measured in the domains R1, R2 and R3. The perfect conditions of ideally smooth surfaces and the SPH inherent advantage of particle tracking allow the recognition of small scale partitioning mechanisms and its importance for bulk flow

Numerical method for three dimensional steady-state two-phase flow calculations

International Nuclear Information System (INIS)

Raymond, P.; Toumi, I.

1992-01-01

This paper presents the numerical scheme which was developed for the FLICA-4 computer code to calculate three dimensional steady state two phase flows. This computer code is devoted to steady state and transient thermal hydraulics analysis of nuclear reactor cores 1,3 . The first section briefly describes the FLICA-4 flow modelling. Then in order to introduce the numerical method for steady state computations, some details are given about the implicit numerical scheme based upon an approximate Riemann solver which was developed for calculation of flow transients. The third section deals with the numerical method for steady state computations, which is derived from this previous general scheme and its optimization. We give some numerical results for steady state calculations and comparisons on required CPU time and memory for various meshing and linear system solvers

Isogeometric analysis of sound propagation through laminar flow in 2-dimensional ducts

DEFF Research Database (Denmark)

Nørtoft, Peter; Gravesen, Jens; Willatzen, Morten

2015-01-01

We consider the propagation of sound through a slowly moving fluid in a 2-dimensional duct. A detailed description of a flow-acoustic model of the problem using B-spline based isogeometric analysis is given. The model couples the non-linear, steady-state, incompressible Navier-Stokes equation in ...

A three-dimensional analyses of fluid flow and heat transfer for moderator integrity assessment in PHWR

International Nuclear Information System (INIS)

Bang, K. H.; Lee, J. Y.; Yoo, S. O.; Kim, M. W.; Kim, H. J.

2002-01-01

Three-dimensional analyses of fluid flow and heat transfer has been performed in this study. The simulation of SPEL experimental work and comparison with experimental data has been carried out to verify the analyses models. Moreover, to verify the CANDU-6 reactor type, analyses of fluid flow and heat transfer in the calandria under the condition of steady state has been performed using FLUENT code, which is the conventional code for a three-dimensional analyses of fluid flow and heat transfer for moderator integrity assessment in PHWR thermal-hydraulics. It is found that the maximum temperature in the moderator is 347K (74 ), so that the moderator has the enough subcoolability to ensure the integrity of pressure tube during LOCA conditions

- GEONET - A Realization of an Automated Data Flow for Data Collecting, Processing, Storing, and Retrieving

International Nuclear Information System (INIS)

Friedsam, Horst; Pushor, Robert; Ruland, Robert; SLAC

2005-01-01

GEONET is a database system developed at the Stanford Linear Accelerator Center for the alignment of the Stanford Linear Collider. It features an automated data flow, ranging from data collection using HP110 handheld computers to processing, storing and retrieving data and finally to adjusted coordinates. This paper gives a brief introduction to the SLC project and the applied survey methods. It emphasizes the hardware and software implementation of GEONET using a network of IBM PC/XT's

On the POD based reduced order modeling of high Reynolds flows

Science.gov (United States)

Behzad, Fariduddin; Helenbrook, Brian; Ahmadi, Goodarz

2012-11-01

Reduced-order modeling (ROM) of a high Reynolds fluid flow using the proper orthogonal decomposition (POD) was studied. Particular attention was given to incompressible, unsteady flow over a two-dimensional NACA0015 airfoil. The Reynolds number is 105 and the angle of attacked of the airfoil is 12°. For DNS solution, hp-finite element method is employed to drive flow samples from which the POD modes are extracted. Particular attention is paid on two issues. First, the stability of POD-ROM resimulation of the turbulent flow is studied. High Reynolds flow contains a lot of fluctuating modes. So, to reach a certain amount of error, more POD modes are needed and the effect of truncation of POD modes is more important. Second, the role of convergence rate on the results of POD. Due to complexity of the flow, convergence of the governing equations is more difficult and the influences of weak convergence appear in the results of POD-ROM. For each issue, the capability of the POD-ROM is assessed in terms of predictions quality of times upon which the POD model was derived. The results are compared with DNS solution and the accuracy and efficiency of different cases are evaluated.

Synchrotron 4-dimensional imaging of two-phase flow through porous media.

Science.gov (United States)

Kim, F H; Penumadu, D; Patel, P; Xiao, X; Garboczi, E J; Moylan, S P; Donmez, M A

2016-01-01

Near real-time visualization of complex two-phase flow in a porous medium was demonstrated with dynamic 4-dimensional (4D) (3D + time) imaging at the 2-BM beam line of the Advanced Photon Source (APS) at Argonne National Laboratory. Advancing fluid fronts through tortuous flow paths and their interactions with sand grains were clearly captured, and formations of air bubbles and capillary bridges were visualized. The intense X-ray photon flux of the synchrotron facility made 4D imaging possible, capturing the dynamic evolution of both solid and fluid phases. Computed Tomography (CT) scans were collected every 12 s with a pixel size of 3.25 µm. The experiment was carried out to improve understanding of the physics associated with two-phase flow. The results provide a source of validation data for numerical simulation codes such as Lattice-Boltzmann, which are used to model multi-phase flow through porous media.

The Chimera Method of Simulation for Unsteady Three-Dimensional Viscous Flow

Science.gov (United States)

Meakin, Robert L.

1996-01-01

The Chimera overset grid method is reviewed and discussed in the context of a method of solution and analysis of unsteady three-dimensional viscous flows. The state of maturity of the various pieces of support software required to use the approach is discussed. A variety of recent applications of the method is presented. Current limitations of the approach are defined.

Application of fast neutron radiography to three-dimensional visualization of steady two-phase flow in a rod bundle

CERN Document Server

Takenaka, N; Fujii, T; Mizubata, M; Yoshii, K

1999-01-01

Three-dimensional void fraction distribution of air-water two-phase flow in a 4x4 rod-bundle near a spacer was visualized by fast neutron radiography using a CT method. One-dimensional cross sectional averaged void fraction distribution was also calculated. The behaviors of low void fraction (thick water) two-phase flow in the rod bundle around the spacer were clearly visualized. It was shown that the void fraction distributions were visualized with a quality similar to those by thermal neutron radiography for low void fraction two-phase flow which is difficult to visualize by thermal neutron radiography. It is concluded that the fast neutron radiography is efficiently applicable to two-phase flow studies.

Altering user' acceptance of automation through prior automation exposure.

Science.gov (United States)

Bekier, Marek; Molesworth, Brett R C

2017-06-01

Air navigation service providers worldwide see increased use of automation as one solution to overcome the capacity constraints imbedded in the present air traffic management (ATM) system. However, increased use of automation within any system is dependent on user acceptance. The present research sought to determine if the point at which an individual is no longer willing to accept or cooperate with automation can be manipulated. Forty participants underwent training on a computer-based air traffic control programme, followed by two ATM exercises (order counterbalanced), one with and one without the aid of automation. Results revealed after exposure to a task with automation assistance, user acceptance of high(er) levels of automation ('tipping point') decreased; suggesting it is indeed possible to alter automation acceptance. Practitioner Summary: This paper investigates whether the point at which a user of automation rejects automation (i.e. 'tipping point') is constant or can be manipulated. The results revealed after exposure to a task with automation assistance, user acceptance of high(er) levels of automation decreased; suggesting it is possible to alter automation acceptance.

On a modified form of navier-stokes equations for three-dimensional flows.

Science.gov (United States)

Venetis, J

2015-01-01

A rephrased form of Navier-Stokes equations is performed for incompressible, three-dimensional, unsteady flows according to Eulerian formalism for the fluid motion. In particular, we propose a geometrical method for the elimination of the nonlinear terms of these fundamental equations, which are expressed in true vector form, and finally arrive at an equivalent system of three semilinear first order PDEs, which hold for a three-dimensional rectangular Cartesian coordinate system. Next, we present the related variational formulation of these modified equations as well as a general type of weak solutions which mainly concern Sobolev spaces.

Ultra-high-speed digital in-line holography system applied to particle-laden supersonic underexpanded jet flows

DEFF Research Database (Denmark)

Ingvorsen, Kristian Mark; Buchmann, Nicolas A.; Soria, Julio

2012-01-01

-fluid interactions in these high-speed flows special high performance techniques are required. The present work is an investigation into the applicability of magnified digital in-line holography with ultra-high-speed recording for the study of three-dimensional supersonic particle-laden flows. An optical setup...... × 10mm calibration grid and 120 μm particles on a glass plate. In the case with the calibration grid it is found that accurate determination of the depthwise position is possible. However, when applying the same technique to the particle target, significant problems are encountered. © 2012...

Turbulence prediction in two-dimensional bundle flows using large eddy simulation

Energy Technology Data Exchange (ETDEWEB)

Ibrahim, W.A.; Hassan, Y.A. [Texas A& M Univ., College Station, TX (United States)

1995-09-01

Turbulent flow is characterized by random fluctuations in the fluid velocity and by intense mixing of the fluid. Due to velocity fluctuations, a wide range of eddies exists in the flow field. Because these eddies carry mass, momentum, and energy, this enhanced mixing can sometimes lead to serious problems, such as tube vibrations in many engineering systems that include fluid-tube bundle combinations. Nuclear fuel bundles and PWR steam generators are existing examples in nuclear power plants. Fluid-induced vibration problems are often discovered during the operation of such systems because some of the fluid-tube interaction characteristics are not fully understood. Large Eddy Simulation, incorporated in a three dimensional computer code, became one of the promising techniques to estimate flow turbulence, predict and prevent of long-term tube fretting affecting PWR steam generators. the present turbulence investigations is a step towards more understanding of fluid-tube interaction characteristics by comparing the tube bundles with various pitch-to-diameter ratios were performed. Power spectral densities were used for comparison with experimental data. Correlations, calculations of different length scales in the flow domain and other important turbulent-related parameters were calculated. Finally, important characteristics of turbulent flow field were presented with the aid of flow visualization with tracers impeded in the flow field.

Three-Dimensional Numerical Analysis of an Operating Helical Rotor Pump at High Speeds and High Pressures including Cavitation

Directory of Open Access Journals (Sweden)

Zhou Yang

2017-01-01

Full Text Available High pressures, high speeds, low noise and miniaturization is the direction of development in hydraulic pump. According to the development trend, an operating helical rotor pump (HRP at high speeds and high pressures has been designed and produced, which rotational speed can reach 12000r/min and outlet pressure is as high as 25MPa. Three-dimensional simulation with and without cavitation inside the HRP is completed by the means of the computational fluid dynamics (CFD in this paper, which contributes to understand the complex fluid flow inside it. Moreover, the influences of the rotational speeds of the HRP with and without cavitation has been simulated at 25MPa.

Automated PCB Inspection System

Directory of Open Access Journals (Sweden)

Syed Usama BUKHARI

2017-05-01

Full Text Available Development of an automated PCB inspection system as per the need of industry is a challenging task. In this paper a case study is presented, to exhibit, a proposed system for an immigration process of a manual PCB inspection system to an automated PCB inspection system, with a minimal intervention on the existing production flow, for a leading automotive manufacturing company. A detailed design of the system, based on computer vision followed by testing and analysis was proposed, in order to aid the manufacturer in the process of automation.

Assessment of turbulent flow effects on the vessel wall using four-dimensional flow MRI.

Science.gov (United States)

Ziegler, Magnus; Lantz, Jonas; Ebbers, Tino; Dyverfeldt, Petter

2017-06-01

To explore the use of MR-estimated turbulence quantities for the assessment of turbulent flow effects on the vessel wall. Numerical velocity data for two patient-derived models was obtained using computational fluid dynamics (CFD) for two physiological flow rates. The four-dimensional (4D) Flow MRI measurements were simulated at three different spatial resolutions and used to investigate the estimation of turbulent wall shear stress (tWSS) using the intravoxel standard deviation (IVSD) of velocity and turbulent kinetic energy (TKE) estimated near the vessel wall. Accurate estimation of tWSS using the IVSD is limited by the spatial resolution achievable with 4D Flow MRI. TKE, estimated near the wall, has a strong linear relationship to the tWSS (mean R 2  = 0.84). Near-wall TKE estimates from MR simulations have good agreement to CFD-derived ground truth (mean R 2  = 0.90). Maps of near-wall TKE have strong visual correspondence to tWSS. Near-wall estimation of TKE permits assessment of relative maps of tWSS, but direct estimation of tWSS is challenging due to limitations in spatial resolution. Assessment of tWSS and near-wall TKE may open new avenues for analysis of different pathologies. Magn Reson Med 77:2310-2319, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

Microfabrication and Test of a Three-Dimensional Polymer Hydro-focusing Unit for Flow Cytometry Applications

Science.gov (United States)

Yang, Ren; Feeback, Daniel L.; Wang, Wan-Jun

2005-01-01

This paper details a novel three-dimensional (3D) hydro-focusing micro cell sorter for micro flow cytometry applications. The unit was microfabricated by means of SU-8 3D lithography. The 3D microstructure for coaxial sheathing was designed, microfabricated, and tested. Three-dimensional hydrofocusing capability was demonstrated with an experiment to sort labeled tanned sheep erythrocytes (red blood cells). This polymer hydro-focusing microstructure is easily microfabricated and integrated with other polymer microfluidic structures. Keywords: SU-8, three-dimensional hydro-focusing, microfluidic, microchannel, cytometer

AUTOMATED CELL SEGMENTATION WITH 3D FLUORESCENCE MICROSCOPY IMAGES.

Science.gov (United States)

Kong, Jun; Wang, Fusheng; Teodoro, George; Liang, Yanhui; Zhu, Yangyang; Tucker-Burden, Carol; Brat, Daniel J

2015-04-01

A large number of cell-oriented cancer investigations require an effective and reliable cell segmentation method on three dimensional (3D) fluorescence microscopic images for quantitative analysis of cell biological properties. In this paper, we present a fully automated cell segmentation method that can detect cells from 3D fluorescence microscopic images. Enlightened by fluorescence imaging techniques, we regulated the image gradient field by gradient vector flow (GVF) with interpolated and smoothed data volume, and grouped voxels based on gradient modes identified by tracking GVF field. Adaptive thresholding was then applied to voxels associated with the same gradient mode where voxel intensities were enhanced by a multiscale cell filter. We applied the method to a large volume of 3D fluorescence imaging data of human brain tumor cells with (1) small cell false detection and missing rates for individual cells; and (2) trivial over and under segmentation incidences for clustered cells. Additionally, the concordance of cell morphometry structure between automated and manual segmentation was encouraging. These results suggest a promising 3D cell segmentation method applicable to cancer studies.

Unsteady single-phase natural circulation flow mixing prediction using CATHARE three-dimensional capabilities

Energy Technology Data Exchange (ETDEWEB)

Salah, Anis Bousbia; Vlassenbroeck, Jacques [Bel V - Subsidiary of the Belgian Federal Agency for Nuclear Contro, Brussels (Belize)

2017-04-15

Coolant mixing under natural circulation flow regime constitutes a key parameter that may play a role in the course of an accidental transient in a nuclear pressurized water reactor. This issue has motivated some experimental investigations carried out within the OECD/NEA PKL projects. The aim was to assess the coolant mixing phenomenon in the reactor pressure vessel downcomer and the core lower plenum under several asymmetric steady and unsteady flow conditions, and to provide experimental data for code validations. Former studies addressed the mixing phenomenon using, on the one hand, one-dimensional computational approaches with cross flows that are not fully validated under transient conditions and, on the other hand, expensive computational fluid dynamic tools that are not always justified for large-scale macroscopic phenomena. In the current framework, an unsteady coolant mixing experiment carried out in the Rossendorf coolant mixing test facility is simulated using the three-dimensional porous media capabilities of the thermal–hydraulic system CATHARE code. The current study allows highlighting the current capabilities of these codes and their suitability for reproducing the main phenomena occurring during asymmetric transient natural circulation mixing conditions.

Convective heat transfer from rough surfaces with two-dimensional ribs - transitional and laminar flow

International Nuclear Information System (INIS)

Dalle Donne, M.; Meyer, L.

1978-01-01

Measurements of friction factor and heat transfer coefficients for two rods of 18.9 mm 0.D. with two-dimensional roughness, each in two different outer smooth tubes have been performed in turbulent and laminar flow. The turbulent flow results indicate that the flow was not thermally fully established, the isothermal data however agree reasonably well with our previously obtained general correlation. Laminar flow results can be correlated best when the Reynolds and Greatz numbers are evaluated at the temperature average between the temperature of the inner rod surface and of the outer smooth surface of the annulus, the average being weighted over the two surfaces. (orig.) [de

High-dimensional change-point estimation: Combining filtering with convex optimization

OpenAIRE

Soh, Yong Sheng; Chandrasekaran, Venkat

2017-01-01

We consider change-point estimation in a sequence of high-dimensional signals given noisy observations. Classical approaches to this problem such as the filtered derivative method are useful for sequences of scalar-valued signals, but they have undesirable scaling behavior in the high-dimensional setting. However, many high-dimensional signals encountered in practice frequently possess latent low-dimensional structure. Motivated by this observation, we propose a technique for high-dimensional...

Automated computation of autonomous spectral submanifolds for nonlinear modal analysis

Science.gov (United States)

Ponsioen, Sten; Pedergnana, Tiemo; Haller, George

2018-04-01

We discuss an automated computational methodology for computing two-dimensional spectral submanifolds (SSMs) in autonomous nonlinear mechanical systems of arbitrary degrees of freedom. In our algorithm, SSMs, the smoothest nonlinear continuations of modal subspaces of the linearized system, are constructed up to arbitrary orders of accuracy, using the parameterization method. An advantage of this approach is that the construction of the SSMs does not break down when the SSM folds over its underlying spectral subspace. A further advantage is an automated a posteriori error estimation feature that enables a systematic increase in the orders of the SSM computation until the required accuracy is reached. We find that the present algorithm provides a major speed-up, relative to numerical continuation methods, in the computation of backbone curves, especially in higher-dimensional problems. We illustrate the accuracy and speed of the automated SSM algorithm on lower- and higher-dimensional mechanical systems.

Spatial-temporal three-dimensional ultrasound plane-by-plane active cavitation mapping for high-intensity focused ultrasound in free field and pulsatile flow.

Science.gov (United States)

Ding, Ting; Hu, Hong; Bai, Chen; Guo, Shifang; Yang, Miao; Wang, Supin; Wan, Mingxi

2016-07-01

Cavitation plays important roles in almost all high-intensity focused ultrasound (HIFU) applications. However, current two-dimensional (2D) cavitation mapping could only provide cavitation activity in one plane. This study proposed a three-dimensional (3D) ultrasound plane-by-plane active cavitation mapping (3D-UPACM) for HIFU in free field and pulsatile flow. The acquisition of channel-domain raw radio-frequency (RF) data in 3D space was performed by sequential plane-by-plane 2D ultrafast active cavitation mapping. Between two adjacent unit locations, there was a waiting time to make cavitation nuclei distribution of the liquid back to the original state. The 3D cavitation map equivalent to the one detected at one time and over the entire volume could be reconstructed by Marching Cube algorithm. Minimum variance (MV) adaptive beamforming was combined with coherence factor (CF) weighting (MVCF) or compressive sensing (CS) method (MVCS) to process the raw RF data for improved beamforming or more rapid data processing. The feasibility of 3D-UPACM was demonstrated in tap-water and a phantom vessel with pulsatile flow. The time interval between temporal evolutions of cavitation bubble cloud could be several microseconds. MVCF beamformer had a signal-to-noise ratio (SNR) at 14.17dB higher, lateral and axial resolution at 2.88times and 1.88times, respectively, which were compared with those of B-mode active cavitation mapping. MVCS beamformer had only 14.94% time penalty of that of MVCF beamformer. This 3D-UPACM technique employs the linear array of a current ultrasound diagnosis system rather than a 2D array transducer to decrease the cost of the instrument. Moreover, although the application is limited by the requirement for a gassy fluid medium or a constant supply of new cavitation nuclei that allows replenishment of nuclei between HIFU exposures, this technique may exhibit a useful tool in 3D cavitation mapping for HIFU with high speed, precision and resolution

High flow ceramic pot filters.

Science.gov (United States)

van Halem, D; van der Laan, H; Soppe, A I A; Heijman, S G J

2017-11-01

Ceramic pot filters are considered safe, robust and appropriate technologies, but there is a general consensus that water revenues are limited due to clogging of the ceramic element. The objective of this study was to investigate the potential of high flow ceramic pot filters to produce more water without sacrificing their microbial removal efficacy. High flow pot filters, produced by increasing the rice husk content, had a higher initial flow rate (6-19 L h -1 ), but initial LRVs for E. coli of high flow filters was slightly lower than for regular ceramic pot filters. This disadvantage was, however, only temporarily as the clogging in high flow filters had a positive effect on the LRV for E. coli (from below 1 to 2-3 after clogging). Therefore, it can be carefully concluded that regular ceramic pot filters perform better initially, but after clogging, the high flow filters have a higher flow rate as well as a higher LRV for E. coli. To improve the initial performance of new high flow filters, it is recommended to further utilize residence time of the water in the receptacle, since additional E. coli inactivation was observed during overnight storage. Although a relationship was observed between flow rate and LRV of MS2 bacteriophages, both regular and high flow filters were unable to reach over 2 LRV. Copyright © 2017 Elsevier Ltd. All rights reserved.

Flow in air conditioned rooms

DEFF Research Database (Denmark)

Nielsen, Peter V.

1974-01-01

Flow in air conditioned r ooms is examined by means of model experiments . The different gearnetries giving unsteady, steady three- dimensional and steady twodimensional flow are determined . Velacity profiles and temperature profiles are measured in some of the geometries. A numerical solution...... of the flow equations is demonstrated and the flow in air conditioned rooms in case of steady two dimensional flow is predi cted. Compari son with measured results is shown i n the case of small Archimedes numbers, and predictions are shown at high Archimedes numbers. A numerical prediction of f low and heat...

High-throughput mouse genotyping using robotics automation.

Science.gov (United States)

Linask, Kaari L; Lo, Cecilia W

2005-02-01

The use of mouse models is rapidly expanding in biomedical research. This has dictated the need for the rapid genotyping of mutant mouse colonies for more efficient utilization of animal holding space. We have established a high-throughput protocol for mouse genotyping using two robotics workstations: a liquid-handling robot to assemble PCR and a microfluidics electrophoresis robot for PCR product analysis. This dual-robotics setup incurs lower start-up costs than a fully automated system while still minimizing human intervention. Essential to this automation scheme is the construction of a database containing customized scripts for programming the robotics workstations. Using these scripts and the robotics systems, multiple combinations of genotyping reactions can be assembled simultaneously, allowing even complex genotyping data to be generated rapidly with consistency and accuracy. A detailed protocol, database, scripts, and additional background information are available at http://dir.nhlbi.nih.gov/labs/ldb-chd/autogene/.

Multivariate statistics high-dimensional and large-sample approximations

CERN Document Server

Fujikoshi, Yasunori; Shimizu, Ryoichi

2010-01-01

A comprehensive examination of high-dimensional analysis of multivariate methods and their real-world applications Multivariate Statistics: High-Dimensional and Large-Sample Approximations is the first book of its kind to explore how classical multivariate methods can be revised and used in place of conventional statistical tools. Written by prominent researchers in the field, the book focuses on high-dimensional and large-scale approximations and details the many basic multivariate methods used to achieve high levels of accuracy. The authors begin with a fundamental presentation of the basic

High dimensional neurocomputing growth, appraisal and applications

CERN Document Server

Tripathi, Bipin Kumar

2015-01-01

The book presents a coherent understanding of computational intelligence from the perspective of what is known as "intelligent computing" with high-dimensional parameters. It critically discusses the central issue of high-dimensional neurocomputing, such as quantitative representation of signals, extending the dimensionality of neuron, supervised and unsupervised learning and design of higher order neurons. The strong point of the book is its clarity and ability of the underlying theory to unify our understanding of high-dimensional computing where conventional methods fail. The plenty of application oriented problems are presented for evaluating, monitoring and maintaining the stability of adaptive learning machine. Author has taken care to cover the breadth and depth of the subject, both in the qualitative as well as quantitative way. The book is intended to enlighten the scientific community, ranging from advanced undergraduates to engineers, scientists and seasoned researchers in computational intelligenc...

NUMERICAL SIMULATION OF FLOW OVER TWO-DIMENSIONAL MOUNTAIN RIDGE USING SIMPLE ISENTROPIC MODEL

Directory of Open Access Journals (Sweden)

Siswanto Siswanto

2009-07-01

Full Text Available Model sederhana isentropis telah diaplikasikan untuk mengidentifikasi perilaku aliran masa udara melewati topografi sebuah gunung. Dalam model isentropis, temperature potensial θ digunakan sebagai koordinat vertikal dalam rezim aliran adiabatis. Medan angin dalam arah vertikal dihilangkan dalam koordinat isentropis sehingga mereduksi sistim tiga dimensi menjadi sistim dua dimensi lapisan θ. Skema komputasi beda hingga tengah telah digunakan untuk memformulasikan model adveksi. Paper ini membahas aplikasi sederhana dari model isentropis untuk mempelajari gelombang gravitasi dan fenomena angin gunung  dengan desain komputasi periodik dan kondisi batas lateral serta simulasi dengan topografi yang berbeda.   The aim of this work is to study turbulent flow over two-dimensional hill using a simple isentropic model. The isentropic model is represented by applying the potential temperature θ, as the vertical coordinate and is conversed in adiabatic flow regimes. This implies a vanishing vertical wind in isentropic coordinates which reduces the three dimensional system to a stack of two dimensional θ–layers. The equations for each isentropic layer are formally identical with the shallow water equation. A computational scheme of centered finite differences is used to formulate an advective model. This work reviews a simple isentropic model application to investigate gravity wave and mountain wave phenomena regard to different experimental design of computation and topographic height.

Three-dimensional three-component particle velocimetry for microscale flows using volumetric scanning

International Nuclear Information System (INIS)

Klein, S A; Moran, J L; Posner, J D; Frakes, D H

2012-01-01

We present a diagnostic platform for measuring three-dimensional three-component (3D3C) velocity fields in microscopic volumes. The imaging system uses high-speed Nipkow spinning disk confocal microscopy. Confocal microscopy provides optical sectioning using pinhole spatial filtering which rejects light originating from out-of-focus objects. The system accomplishes volumetric scanning by rapid translation of the high numerical aperture objective using a piezo objective positioner. The motion of fluorescent microspheres is quantified using 3D3C super resolution particle-imaging velocimetry with instantaneous spatial resolutions of the order of 5 µm or less in all three dimensions. We examine 3D3C flow in a PDMS microchannel with an expanding section at 3D acquisition rates of 30 Hz, and find strong agreement with a computational model. Equations from the PIV and PTV literature adapted for a scanning objective provide estimates of maximum measurable velocity. The technique allows for isosurface visualization of 3D particle motion and robust high spatial resolution velocity measurements without requiring a calibration step or reconstruction algorithms. (paper)

Pilot opinions on high level flight deck automation issues: Toward the development of a design philosophy

Science.gov (United States)

Tenney, Yvette J.; Rogers, William H.; Pew, Richard W.

1995-01-01

There has been much concern in recent years about the rapid increase in automation on commercial flight decks. The survey was composed of three major sections. The first section asked pilots to rate different automation components that exist on the latest commercial aircraft regarding their obtrusiveness and the attention and effort required in using them. The second section addressed general 'automation philosophy' issues. The third section focused on issues related to levels and amount of automation. The results indicate that pilots of advanced aircraft like their automation, use it, and would welcome more automation. However, they also believe that automation has many disadvantages, especially fully autonomous automation. They want their automation to be simple and reliable and to produce predictable results. The biggest needs for higher levels of automation were in pre-flight, communication, systems management, and task management functions, planning as well as response tasks, and high workload situations. There is an irony and a challenge in the implications of these findings. On the one hand pilots would like new automation to be simple and reliable, but they need it to support the most complex part of the job--managing and planning tasks in high workload situations.

Magnetohydrodynamic three-dimensional flow of viscoelastic nanofluid in the presence of nonlinear thermal radiation

Energy Technology Data Exchange (ETDEWEB)

Hayat, T. [Department of Mathematics, Quaid-I-Azam University 45320, Islamabad 44000 (Pakistan); Nonlinear Analysis and Applied Mathematics (NAAM) Research Group, Faculty of Science, King Abdulaziz University, P. O. Box 80203, Jeddah 21589 (Saudi Arabia); Muhammad, Taseer, E-mail: taseer_qau@yahoo.com [Department of Mathematics, Quaid-I-Azam University 45320, Islamabad 44000 (Pakistan); Alsaedi, A.; Alhuthali, M.S. [Nonlinear Analysis and Applied Mathematics (NAAM) Research Group, Faculty of Science, King Abdulaziz University, P. O. Box 80203, Jeddah 21589 (Saudi Arabia)

2015-07-01

Magnetohydrodynamic (MHD) three-dimensional flow of couple stress nanofluid in the presence of thermophoresis and Brownian motion effects is analyzed. Energy equation subject to nonlinear thermal radiation is taken into account. The flow is generated by a bidirectional stretching surface. Fluid is electrically conducting in the presence of a constant applied magnetic field. The induced magnetic field is neglected for a small magnetic Reynolds number. Mathematical formulation is performed using boundary layer analysis. Newly proposed boundary condition requiring zero nanoparticle mass flux is employed. The governing nonlinear mathematical problems are first converted into dimensionless expressions and then solved for the series solutions of velocities, temperature and nanoparticles concentration. Convergence of the constructed solutions is verified. Effects of emerging parameters on the temperature and nanoparticles concentration are plotted and discussed. Skin friction coefficients and Nusselt number are also computed and analyzed. It is found that the thermal boundary layer thickness is an increasing function of radiative effect. - Highlights: • Three-dimensional boundary layer flow of viscoelastic nanofluid is examined. • Nonlinear thermal radiation is analyzed. • Brownian motion and thermophoresis effects are present. • Recently developed condition requiring zero nanoparticle mass flux is implemented. • Construction of convergent solutions of nonlinear flow is possible.

Thermally radiative three-dimensional flow of Jeffrey nanofluid with internal heat generation and magnetic field

Energy Technology Data Exchange (ETDEWEB)

Shehzad, S.A., E-mail: ali_qau70@yahoo.com [Department of Mathematics, Comsats Institute of Information Technology, Sahiwal 57000 (Pakistan); Abdullah, Z. [Department of Mathematics, Comsats Institute of Information Technology, Sahiwal 57000 (Pakistan); Alsaedi, A. [Nonlinear Analysis and Applied Mathematics (NAAM) Research Group, Faculty of Science, King Abdulaziz University, P. O. Box 80257, Jeddah 21589 (Saudi Arabia); Abbasi, F.M. [Department of Mathematics, Comsats Institute of Information Technology, Islamabad 44000 (Pakistan); Hayat, T. [Nonlinear Analysis and Applied Mathematics (NAAM) Research Group, Faculty of Science, King Abdulaziz University, P. O. Box 80257, Jeddah 21589 (Saudi Arabia); Department of Mathematics, Quaid-I-Azam University 45320, Islamabad 44000 (Pakistan)

2016-01-01

This research work addresses the three-dimensional hydromagnetic flow of Jeffrey fluid with nanoparticles. Flow is generated by a bidirectional stretching surface. The effects of thermal radiation and internal heat generation are encountered in energy expressions. More realistic convective boundary conditions at the surface are employed instead of constant surface temperature and mass species conditions. Boundary layer assumptions lead to the governing non-linear mathematical model. Resulting equations through momentum, energy and mass species are made dimensionless using suitable variables. The solution expressions of dimensionless velocities, temperature and nanoparticle concentration have been computed for the convergent series solutions. The impacts of interesting parameters on the dimensionless quantities are displayed and interpreted. The values of physical quantities are computed and analyzed. - Highlights: • Three-dimensional hydromagnetic flow of Jeffrey nanofluid is considered. • Brownian motion and thermophoresis effects are encountered. • Heat transfer analysis is performed with thermal radiation. • Results are plotted and visualized.

Thermal and solutal stratification in mixed convection three-dimensional flow of an Oldroyd-B nanofluid

Directory of Open Access Journals (Sweden)

Tasawar Hayat

Full Text Available This paper investigates the double stratified effects in mixed convection three-dimensional flow of an Oldroyd-B nanofluid. The flow is due to a bidirectional stretching surface. Mathematical analysis is carried out using the temperature and concentration stratification effects. Brownian motion, thermophoresis and chemical reaction effects are also considered. The governing nonlinear boundary layer equations are first converted into the dimensionless ordinary differential equations and then solved for the convergent series solutions of velocity, temperature and nanoparticles concentration. Convergence analysis of the obtained series solutions is also checked and verified. Effects of various emerging parameters are studied in details. Numerical values of local Nusselt and Sherwood numbers are tabulated and analyzed. It is noticed that the impact of mixed convection parameter on temperature and nanoparticles concentration is quite similar. Both temperature and nanoparticles concentration are reduced for larger mixed convection parameter. Keywords: Three-dimensional flow, Oldroyd-B fluid, Nanoparticles, Mixed convection, Thermal and solutal stratification, Chemically reactive species

Analysis of the transient compressible vapor flow in heat pipes

Science.gov (United States)

Jang, J. H.; Faghri, A.; Chang, W. S.

1989-01-01

The transient compressible one-dimensional vapor flow dynamics in a heat pipe is modeled. The numerical results are obtained by using the implicit non-iterative Beam-Warming finite difference method. The model is tested for simulated heat pipe vapor flow and actual vapor flow in cylindrical heat pipes. A good comparison of the present transient results for the simulated heat pipe vapor flow with the previous results of a two-dimensional numerical model is achieved and the steady state results are in agreement with the existing experimental data. The transient behavior of the vapor flow under subsonic, sonic, and supersonic speeds and high mass flow rates are successfully predicted. The one-dimensional model also describes the vapor flow dynamics in cylindrical heat pipes at high temperatures.

Analysis of the transient compressible vapor flow in heat pipe

International Nuclear Information System (INIS)

Jang, J.H.; Faghri, A.; Chang, W.S.

1989-07-01

The transient compressible one-dimensional vapor flow dynamics in a heat pipe is modeled. The numerical results are obtained by using the implicit non-iterative Beam-Warming finite difference method. The model is tested for simulated heat pipe vapor flow and actual vapor flow in cylindrical heat pipes. A good comparison of the present transient results for the simulated heat pipe vapor flow with the previous results of a two-dimensional numerical model is achieved and the steady state results are in agreement with the existing experimental data. The transient behavior of the vapor flow under subsonic, sonic, and supersonic speeds and high mass flow rates are successfully predicted. The one-dimensional model also describes the vapor flow dynamics in cylindrical heat pipes at high temperatures

Analysis of the transient compressible vapor flow in heat pipe

Science.gov (United States)

Jang, Jong Hoon; Faghri, Amir; Chang, Won Soon

1989-01-01

The transient compressible one-dimensional vapor flow dynamics in a heat pipe is modeled. The numerical results are obtained by using the implicit non-iterative Beam-Warming finite difference method. The model is tested for simulated heat pipe vapor flow and actual flow in cylindrical heat pipes. A good comparison of the present transient results for the simulated heat pipe vapor flow with the previous results of a two-dimensional numerical model is achieved and the steady state results are in agreement with the existing experimental data. The transient behavior of the vapor flow under subsonic, sonic, and supersonic speeds and high mass flow rates are successfully predicted. The one-dimensional model also describes the vapor flow dynamics in cylindrical heat pipes at high temperatures.

Alignment dynamics of diffusive scalar gradient in a two-dimensional model flow

Science.gov (United States)

Gonzalez, M.

2018-04-01

The Lagrangian two-dimensional approach of scalar gradient kinematics is revisited accounting for molecular diffusion. Numerical simulations are performed in an analytic, parameterized model flow, which enables considering different regimes of scalar gradient dynamics. Attention is especially focused on the influence of molecular diffusion on Lagrangian statistical orientations and on the dynamics of scalar gradient alignment.

3D velocity measurements in fluid flows using multiple exposure holography

International Nuclear Information System (INIS)

Stanislas, M.; Rodriguez, O.; Dadi, M.; Beluche, F.

1987-01-01

An account is given of multiple exposure holography's application to the measurement of velocity in fluid flows. The method is nonintrusive, and yields access to the three components of the instantaneous velocity in three-dimensional domains. These characteristics render such holographic data complementary to classical LDV. Attention is given to solutions proposed for such limitations inherent in the method as the rather lengthy acquisition time; this difficulty is presently addressed by means of an automated evaluation methodology. 12 references

Degree of anisotropy as an automated indicator of rip channels in high resolution bathymetric models

Science.gov (United States)

Trimble, S. M.; Houser, C.; Bishop, M. P.

2017-12-01

A rip current is a concentrated seaward flow of water that forms in the surf zone of a beach as a result of alongshore variations in wave breaking. Rips can carry swimmers swiftly into deep water, and they are responsible for hundreds of fatal drownings and thousands of rescues worldwide each year. These currents form regularly alongside hard structures like piers and jetties, and can also form along sandy coasts when there is a three dimensional bar morphology. This latter rip type tends to be variable in strength and location, making them arguably the most dangerous to swimmers and most difficult to identify. These currents form in characteristic rip channels in surf zone bathymetry, in which the primary axis of self-similarity is oriented shore-normal. This paper demonstrates a new method for automating identification of such rip channels in bathymetric digital surface models (DSMs) using bathymetric data collected by various remote sensing methods. Degree of anisotropy is used to detect rip channels and distinguishes between sandbars, rip channels, and other beach features. This has implications for coastal geomorphology theory and safety practices. As technological advances increase access and accuracy of topobathy mapping methods in the surf zone, frequent nearshore bathymetric DSMs could be more easily captured and processed, then analyzed with this method to result in localized, automated, and frequent detection of rip channels. This could ultimately reduce rip-related fatalities worldwide (i) in present mitigation, by identifying the present location of rip channels, (ii) in forecasting, by tracking the channel's evolution through multiple DSMs, and (iii) in rip education by improving local lifeguard knowledge of the rip hazard. Although this paper on applies analysis of degree of anisotropy to the identification of rip channels, this parameter can be applied to multiple facets of barrier island morphological analysis.

Preface to the special section on human factors and automation in vehicles: designing highly automated vehicles with the driver in mind.

Science.gov (United States)

Merat, Natasha; Lee, John D

2012-10-01

This special section brings together diverse research regarding driver interaction with advanced automotive technology to guide design of increasingly automated vehicles. Rapidly evolving vehicle automation will likely change cars and trucks more in the next 5 years than the preceding 50, radically redefining what it means to drive. This special section includes 10 articles from European and North American researchers reporting simulator and naturalistic driving studies. Little research has considered the consequences of fully automated driving, with most focusing on lane-keeping and speed control systems individually. The studies reveal two underlying design philosophies: automate driving versus support driving. Results of several studies, consistent with previous research in other domains, suggest that the automate philosophy can delay driver responses to incidents in which the driver has to intervene and take control from the automation. Understanding how to orchestrate the transfer or sharing of control between the system and the driver, particularly in critical incidents, emerges as a central challenge. Designers should not assume that automation can substitute seamlessly for a human driver, nor can they assume that the driver can safely accommodate the limitations of automation. Designers, policy makers, and researchers must give careful consideration to what role the person should have in highly automated vehicles and how to support the driver if the driver is to be responsible for vehicle control. As in other domains, driving safety increasingly depends on the combined performance of the human and automation, and successful designs will depend on recognizing and supporting the new roles of the driver.

Automated 3-D Radiation Mapping

International Nuclear Information System (INIS)

Tarpinian, J. E.

1991-01-01

This work describes an automated radiation detection and imaging system which combines several state-of-the-art technologies to produce a portable but very powerful visualization tool for planning work in radiation environments. The system combines a radiation detection system, a computerized radiation imaging program, and computerized 3-D modeling to automatically locate and measurements are automatically collected and imaging techniques are used to produce colored, 'isodose' images of the measured radiation fields. The isodose lines from the images are then superimposed over the 3-D model of the area. The final display shows the various components in a room and their associated radiation fields. The use of an automated radiation detection system increases the quality of radiation survey obtained measurements. The additional use of a three-dimensional display allows easier visualization of the area and associated radiological conditions than two-dimensional sketches

Upscaling and automation of electrophysiology: toward high throughput screening in ion channel drug discovery

DEFF Research Database (Denmark)

Asmild, Margit; Oswald, Nicholas; Krzywkowski, Karen M

2003-01-01

by developing two lines of automated patch clamp products, a traditional pipette-based system called Apatchi-1, and a silicon chip-based system QPatch. The degree of automation spans from semi-automation (Apatchi-1) where a trained technician interacts with the system in a limited way, to a complete automation...... (QPatch 96) where the system works continuously and unattended until screening of a full compound library is completed. The performance of the systems range from medium to high throughputs....

Flexible automation and the loss of pooling synergy

NARCIS (Netherlands)

Slomp, Jannes; Zee, Durk-Jouke van der

This paper focuses on the effects of flexible automation on the performance of a job shop. Flexible automated machines may significantly improve the delivery performance and the flow time of jobs. The insertion of a flexible automated system in a job shop, however, also has a counter effect on the

Histogram deconvolution - An aid to automated classifiers

Science.gov (United States)

Lorre, J. J.

1983-01-01

It is shown that N-dimensional histograms are convolved by the addition of noise in the picture domain. Three methods are described which provide the ability to deconvolve such noise-affected histograms. The purpose of the deconvolution is to provide automated classifiers with a higher quality N-dimensional histogram from which to obtain classification statistics.

Development of the three dimensional flow model in the SPACE code

International Nuclear Information System (INIS)

Oh, Myung Taek; Park, Chan Eok; Kim, Shin Whan

2014-01-01

SPACE (Safety and Performance Analysis CodE) is a nuclear plant safety analysis code, which has been developed in the Republic of Korea through a joint research between the Korean nuclear industry and research institutes. The SPACE code has been developed with multi-dimensional capabilities as a requirement of the next generation safety code. It allows users to more accurately model the multi-dimensional flow behavior that can be exhibited in components such as the core, lower plenum, upper plenum and downcomer region. Based on generalized models, the code can model any configuration or type of fluid system. All the geometric quantities of mesh are described in terms of cell volume, centroid, face area, and face center, so that it can naturally represent not only the one dimensional (1D) or three dimensional (3D) Cartesian system, but also the cylindrical mesh system. It is possible to simulate large and complex domains by modelling the complex parts with a 3D approach and the rest of the system with a 1D approach. By 1D/3D co-simulation, more realistic conditions and component models can be obtained, providing a deeper understanding of complex systems, and it is expected to overcome the shortcomings of 1D system codes. (author)

Driver-centred vehicle automation: using network analysis for agent-based modelling of the driver in highly automated driving systems.

Science.gov (United States)

Banks, Victoria A; Stanton, Neville A

2016-11-01

To the average driver, the concept of automation in driving infers that they can become completely 'hands and feet free'. This is a common misconception, however, one that has been shown through the application of Network Analysis to new Cruise Assist technologies that may feature on our roads by 2020. Through the adoption of a Systems Theoretic approach, this paper introduces the concept of driver-initiated automation which reflects the role of the driver in highly automated driving systems. Using a combination of traditional task analysis and the application of quantitative network metrics, this agent-based modelling paper shows how the role of the driver remains an integral part of the driving system implicating the need for designers to ensure they are provided with the tools necessary to remain actively in-the-loop despite giving increasing opportunities to delegate their control to the automated subsystems. Practitioner Summary: This paper describes and analyses a driver-initiated command and control system of automation using representations afforded by task and social networks to understand how drivers remain actively involved in the task. A network analysis of different driver commands suggests that such a strategy does maintain the driver in the control loop.

Simulations of three-dimensional viscoelastic flows past a circular cylinder at moderate Reynolds numbers